HHsearch alignment for GI: 254780545 and conserved domain: PRK08451
>PRK08451 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.44 E-value=7.8e-12 Score=104.63 Aligned_cols=204 Identities=26% Similarity=0.426 Sum_probs=135.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCE----------------
Q ss_conf 6988985288999999999874335676642012333110037874258889999742469970----------------
Q gi|254780545|r 146 TFKDVAGVDEAKEDLQEIVDFLCDPQKFKRLGGRIPHGVLLVGPPGTGKTLLARAVAGEANVPF---------------- 209 (647)
Q Consensus 146 ~f~dv~g~~~~k~~~~~~v~~l~~~~~~~~~g~~~p~g~ll~GppGtGKTlla~a~a~e~~~~f---------------- 209 (647)
T Consensus 12 ~F~evIGQe~iv~~L~nAi~-----------~~Rl~HAYLFsGPrGvGKTt~ArifAkaLnC~~~~~~~PCg~C~sC~~i 80 (523)
T PRK08451 12 HFDELIGQESVSKTLSLALD-----------NNRLAHAYLFSGLRGSGKTSSARIFSRALVCEQGPSSTPCGTCAQCQAA 80 (523)
T ss_pred CHHHCCCCHHHHHHHHHHHH-----------CCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
T ss_conf 65440494999999999998-----------5996715875789986889999999999759999998988878889998
Q ss_pred ECCCHHHHHHHHHH--CCHHHHHHHHHHHHHHCC-----HHEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 20585788644420--332459999999987378-----01206323564144557898862688988998998530323
Q gi|254780545|r 210 FTISGSDFVELFVG--VGASRVRDMFEQAKNNSP-----CIVFVDEIDAVGRHRGIGLGGGNDEREQTLNQLLVEMDGFE 282 (647)
Q Consensus 210 ~~~~~s~~~~~~~g--~g~~~vr~lf~~a~~~~p-----~iifiDeida~~~~r~~~~~~~~~e~~~~ln~ll~~mdg~~ 282 (647)
T Consensus 81 ~~g~hpDViEiDaasn~gID~IReLie~~~-~~P~~gryKV~IIDEah~Lt--------------~~A~NALLKTLE--E 143 (523)
T PRK08451 81 LEGRHIDIIEMDAASNRGIDDIRNLIEQTK-YKPSMARFKIFIIDEVHMLT--------------KEAFNALLKTLE--E 143 (523)
T ss_pred HCCCCCCEEEECCCCCCCHHHHHHHHHHHC-CCCCCCCEEEEEEECCCCCC--------------HHHHHHHHHHCC--C
T ss_conf 648999855105533368999999999723-58867972799982603048--------------999999999703--8
Q ss_pred CCCCEEEEEECCCCCCCCHHHC-CCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHH
Q ss_conf 5778299996298100883331-656423141000134788999999985488777321102454412037989999999
Q gi|254780545|r 283 SSEGVILIAATNRPDVLDAALL-RPGRFDRQITVPNPDIVGREHILMVHSRNVPLAPNVILKTIARGTPGFSGADLRNLV 361 (647)
Q Consensus 283 ~~~~v~vi~aTn~~~~lD~al~-RpgRfd~~i~~~~P~~~~r~~i~~~~~~~~~~~~~~d~~~la~~t~g~sgAdi~~~~ 361 (647)
T Consensus 144 PP~~vvFILaTTep~KLp~TIlSRCQ~f~Fk-~I~~~~I~~~L~~I~-~~E~i~~e~~-AL~~IA~~a~G-slRDalslL 219 (523)
T PRK08451 144 PPSYVKFILATTDPLKLPATILSRTQHFRFK-QIPQNSIISHLKTIL-NKEGVSYEPE-ALEILARSGSG-SLRDTLTLL 219 (523)
T ss_pred CCCCCEEEEECCCHHHCHHHHHHHHHCCCCC-CCCHHHHHHHHHHHH-HHCCCCCCHH-HHHHHHHHCCC-CHHHHHHHH
T ss_conf 9878379997599476848887420311033-799999999999999-9839987999-99999997789-486898799
Q ss_pred HHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf 998764553202421045689997
Q gi|254780545|r 362 NEAALMAARRNRRLVTMQEFEDAK 385 (647)
Q Consensus 362 ~eAa~~a~r~~~~~i~~~dl~~A~ 385 (647)
T Consensus 220 dQ~i~~~----~~~i~~~~v~~~l 239 (523)
T PRK08451 220 DQAIIFC----KNAITESKVADML 239 (523)
T ss_pred HHHHHHC----CCCCCHHHHHHHH
T ss_conf 9999847----9987799999985