HHsearch alignment for GI: 254780545 and conserved domain: PRK08853
>PRK08853 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.16 E-value=6.1e-10 Score=90.95 Aligned_cols=196 Identities=26% Similarity=0.367 Sum_probs=124.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCCCCC-------E------ECC
Q ss_conf 698898528899999999987433567664201233311003787425888999974246997-------0------205
Q gi|254780545|r 146 TFKDVAGVDEAKEDLQEIVDFLCDPQKFKRLGGRIPHGVLLVGPPGTGKTLLARAVAGEANVP-------F------FTI 212 (647)
Q Consensus 146 ~f~dv~g~~~~k~~~~~~v~~l~~~~~~~~~g~~~p~g~ll~GppGtGKTlla~a~a~e~~~~-------f------~~~ 212 (647)
T Consensus 14 ~f~e~vGQ~~v~~~L~nal~-----------~~rl~haylf~G~rGvGKTt~ARi~Ak~lNC~~~~~~~pcg~C~~C~~i 82 (717)
T PRK08853 14 QFKEVVGQSHVLTALENALA-----------HNRLHHAYLFSGTRGVGKTTIGRLFAKGLNCETGITSTPCGQCATCKEI 82 (717)
T ss_pred CHHHHCCCHHHHHHHHHHHH-----------CCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
T ss_conf 56551385999999999997-----------0997405761088988898999999998678999999978887026767
Q ss_pred CH---HHHHHHHHHCCHH-----HHHHHHHHHHHHCC-----HHEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 85---7886444203324-----59999999987378-----01206323564144557898862688988998998530
Q gi|254780545|r 213 SG---SDFVELFVGVGAS-----RVRDMFEQAKNNSP-----CIVFVDEIDAVGRHRGIGLGGGNDEREQTLNQLLVEMD 279 (647)
Q Consensus 213 ~~---s~~~~~~~g~g~~-----~vr~lf~~a~~~~p-----~iifiDeida~~~~r~~~~~~~~~e~~~~ln~ll~~md 279 (647)
T Consensus 83 ~~g~~~d~~Ei---DaAs~~~vdd~rel~~~~-~y~p~~~~yKvyiiDEvHmls--------------~~afnAlLKtlE 144 (717)
T PRK08853 83 DEGRFVDLLEI---DAASRTKVEDTRELLDNV-QYKPARGRFKVYLIDEVHMLS--------------RHSFNALLKTLE 144 (717)
T ss_pred HCCCCCCEEEE---CCCCCCCHHHHHHHHHHC-CCCCCCCCEEEEEEECHHHCC--------------HHHHHHHHHHHC
T ss_conf 44787752454---056567889999999855-548877854799983054438--------------999999987603
Q ss_pred CCCCCCCEEEEEECCCCCCCCHHHC-CCCCCCCEEEECHHHHHHHHHHHHHHH--CCCCCCCCCCHHHHHHHHHCCCHHH
Q ss_conf 3235778299996298100883331-656423141000134788999999985--4887773211024544120379899
Q gi|254780545|r 280 GFESSEGVILIAATNRPDVLDAALL-RPGRFDRQITVPNPDIVGREHILMVHS--RNVPLAPNVILKTIARGTPGFSGAD 356 (647)
Q Consensus 280 g~~~~~~v~vi~aTn~~~~lD~al~-RpgRfd~~i~~~~P~~~~r~~i~~~~~--~~~~~~~~~d~~~la~~t~g~sgAd 356 (647)
T Consensus 145 --EPP~hv~FilaTT~~~kip~TilSRc~~f~l~~-~~~~~i~~~---l~~i~~~E~i~~~~~-al~~ia~~a~G-s~Rd 216 (717)
T PRK08853 145 --EPPEYVKFLLATTDPQKLPVTILSRCLQFHLKP-ISVDQIHQQ---LDFVLDKEQVSAEAR-ALGLIAHAADG-SMRD 216 (717)
T ss_pred --CCCCCEEEEEECCCHHHCCHHHHHHHHHCCCCC-CCHHHHHHH---HHHHHHHCCCCCCHH-HHHHHHHHCCC-CHHH
T ss_conf --787564899843873437388987654423268-999999999---999999759876999-99999997688-3778
Q ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHH
Q ss_conf 99999998764553202421045689
Q gi|254780545|r 357 LRNLVNEAALMAARRNRRLVTMQEFE 382 (647)
Q Consensus 357 i~~~~~eAa~~a~r~~~~~i~~~dl~ 382 (647)
T Consensus 217 alsl~dqaia----~~~g~~~~~~v~ 238 (717)
T PRK08853 217 ALSLTDQAIA----LGNGQVTTDIVS 238 (717)
T ss_pred HHHHHHHHHH----HCCCCCCHHHHH
T ss_conf 8889999999----658971699999