HHsearch alignment for GI: 254780545 and conserved domain: PRK08903
>PRK08903 hypothetical protein; Validated.
Probab=99.01 E-value=5.2e-09 Score=84.21 Aligned_cols=170 Identities=16% Similarity=0.164 Sum_probs=103.9
Q ss_pred EEECCCCCHHHHHHHHHHHCCC---CCCEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHEEHHHHHHHHCCCCCCC
Q ss_conf 1003787425888999974246---9970205857886444203324599999999873780120632356414455789
Q gi|254780545|r 184 VLLVGPPGTGKTLLARAVAGEA---NVPFFTISGSDFVELFVGVGASRVRDMFEQAKNNSPCIVFVDEIDAVGRHRGIGL 260 (647)
Q Consensus 184 ~ll~GppGtGKTlla~a~a~e~---~~~f~~~~~s~~~~~~~g~g~~~vr~lf~~a~~~~p~iifiDeida~~~~r~~~~ 260 (647)
T Consensus 45 l~i~G~~G~GKTHLl~a~~~~~~~~~~~~~yl~~~~~~~------------~~~~~~--~~d~l~iDDi~~i~~~~---- 106 (227)
T PRK08903 45 FYLWGEAGSGRSHLLQALVAAASEGGKNARYLDPASPLL------------AFDFDP--RAELYAVDDVERLDDAQ---- 106 (227)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHH------------HHHHHH--CCCEEEEECCCCCCCHH----
T ss_conf 999899999888999999999980699749965110457------------774200--18989996411489569----
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCC--CHHHCCCCCCC--CEEEECHHHHHHHHHHHHHHHC--CC
Q ss_conf 886268898899899853032357782999962981008--83331656423--1410001347889999999854--88
Q gi|254780545|r 261 GGGNDEREQTLNQLLVEMDGFESSEGVILIAATNRPDVL--DAALLRPGRFD--RQITVPNPDIVGREHILMVHSR--NV 334 (647)
Q Consensus 261 ~~~~~e~~~~ln~ll~~mdg~~~~~~v~vi~aTn~~~~l--D~al~RpgRfd--~~i~~~~P~~~~r~~i~~~~~~--~~ 334 (647)
T Consensus 107 ---q~~lF~l~N~~~------~~~~~~ll~s~~~~p~~l~~~~DL~S--Rl~~gl~~~i~~pdde~~~~iL~~~a~~rgl 175 (227)
T PRK08903 107 ---QIALFNLFNRVR------AHGKTALLVAGPAAPLALDVREDLRT--RLGWGLVYEVKPLSDEDKIAALKAAAAERGL 175 (227)
T ss_pred ---HHHHHHHHHHHH------HCCCCEEEECCCCCHHHCCCCHHHHH--HHHCCCEEEEECCCHHHHHHHHHHHHHHCCC
T ss_conf ---999999999999------72994899718997120120089999--9938973899797999999999999996299
Q ss_pred CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf 777321102454412037989999999998764553202421045689997
Q gi|254780545|r 335 PLAPNVILKTIARGTPGFSGADLRNLVNEAALMAARRNRRLVTMQEFEDAK 385 (647)
Q Consensus 335 ~~~~~~d~~~la~~t~g~sgAdi~~~~~eAa~~a~r~~~~~i~~~dl~~A~ 385 (647)
T Consensus 176 ~l~~~v-~~yl~~r~~-R~~~~L~~~l~~Ld~~sl~-~kr~iTi~lvkevL 223 (227)
T PRK08903 176 QLADEV-PDYLLTHFR-RDMPSLMALLDALDRYSLE-QKRAVTLPLLREML 223 (227)
T ss_pred CCCHHH-HHHHHHHHC-CCHHHHHHHHHHHHHHHHH-CCCCCCHHHHHHHH
T ss_conf 998899-999999834-7899999999999999998-29999999999985