HHsearch alignment for GI: 254780545 and conserved domain: PRK09354
>PRK09354 recA recombinase A; Provisional.
Probab=96.64 E-value=0.0045 Score=41.25 Aligned_cols=29 Identities=48% Similarity=0.799 Sum_probs=23.0
Q ss_pred HH-CCCCCC--EEECCCCCHHHHHHHHHHHCC
Q ss_conf 20-123331--100378742588899997424
Q gi|254780545|r 176 LG-GRIPHG--VLLVGPPGTGKTLLARAVAGE 204 (647)
Q Consensus 176 ~g-~~~p~g--~ll~GppGtGKTlla~a~a~e 204 (647)
T Consensus 52 LGiGG~P~GRivEi~G~esSGKTtlal~~iae 83 (350)
T PRK09354 52 LGIGGLPKGRIVEIYGPESSGKTTLALHAIAE 83 (350)
T ss_pred HCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH
T ss_conf 75899678708999889877799999999999