HHsearch alignment for GI: 254780545 and conserved domain: PRK09862

Probab=98.90  E-value=8e-08  Score=75.62  Aligned_cols=49  Identities=43%  Similarity=0.737  Sum_probs=36.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCC
Q ss_conf             422569889852889999999998743356766420123331100378742588899997424
Q gi|254780545|r  142 VGSVTFKDVAGVDEAKEDLQEIVDFLCDPQKFKRLGGRIPHGVLLVGPPGTGKTLLARAVAGE  204 (647)
Q Consensus       142 ~~~v~f~dv~g~~~~k~~~~~~v~~l~~~~~~~~~g~~~p~g~ll~GppGtGKTlla~a~a~e  204 (647)
T Consensus       185 ~~~~D~~dv~Gq~~akrale-IA----------AAG---gHnlLl~GpPG~GKTMlA~rlp~I  233 (506)
T PRK09862        185 ALQHDLSDVVGQEQGKRGLE-IT----------AAG---GHNLLLIGPPGTGKTMLASRINGL  233 (506)
T ss_pred             CCCCCHHHHCCCHHHHHHHH-HH----------HCC---CCCEEEECCCCCCHHHHHHHHHHC
T ss_conf             66567565369799999999-97----------446---886598769994598999775123