HHsearch alignment for GI: 254780545 and conserved domain: PRK11823

Probab=96.90  E-value=0.0076  Score=39.58  Aligned_cols=118  Identities=25%  Similarity=0.409  Sum_probs=71.9

Q ss_pred             HHHCCCCCC--EEECCCCCHHHHHHHHHHHCC--CCCCEECCCHHHHHHHH------HH--------CCHHHHHHHHHHH
Q ss_conf             420123331--100378742588899997424--69970205857886444------20--------3324599999999
Q gi|254780545|r  175 RLGGRIPHG--VLLVGPPGTGKTLLARAVAGE--ANVPFFTISGSDFVELF------VG--------VGASRVRDMFEQA  236 (647)
Q Consensus       175 ~~g~~~p~g--~ll~GppGtGKTlla~a~a~e--~~~~f~~~~~s~~~~~~------~g--------~g~~~vr~lf~~a  236 (647)
T Consensus        82 VLGGGlV~GS~iLlgGePGIGKSTLlLQ~a~~la~~~~vLYvSGEES~~Qik~RA~RLg~~~~~l~l~~et~l~~Il~~i  161 (454)
T PRK11823         82 VLGGGLVPGSVVLIGGDPGIGKSTLLLQVAAALAAGGKVLYVSGEESLQQIKLRAERLGLPSDNLYLLAETNLEDILATI  161 (454)
T ss_pred             CCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHH
T ss_conf             21587206648995079988899999999999855995799815015789999999758888873788536899999999


Q ss_pred             HHHCCHHEEHHHHHHHHCCCCCCCCC-CCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC
Q ss_conf             87378012063235641445578988-626889889989985303235778299996298
Q gi|254780545|r  237 KNNSPCIVFVDEIDAVGRHRGIGLGG-GNDEREQTLNQLLVEMDGFESSEGVILIAATNR  295 (647)
Q Consensus       237 ~~~~p~iifiDeida~~~~r~~~~~~-~~~e~~~~ln~ll~~mdg~~~~~~v~vi~aTn~  295 (647)
T Consensus       162 ~~~~P~~lIIDSIQT~~~~~~~s~pGsvsQVre~a--~~L~~~AK-~~~i~~~lVGHVTK  218 (454)
T PRK11823        162 EEEKPDLVVIDSIQTMYSPELESAPGSVSQVRECA--AELTRLAK-QSGIAVFLVGHVTK  218 (454)
T ss_pred             HHHCCCEEEEECHHEEEECCCCCCCCCHHHHHHHH--HHHHHHHH-HCCCCEEEEEEECC
T ss_conf             86099889994311154156677899789999999--99999997-44982899997726