HHsearch alignment for GI: 254780545 and conserved domain: PRK13406
>PRK13406 bchD magnesium chelatase subunit D; Provisional.
Probab=97.88 E-value=0.00031 Score=49.61 Aligned_cols=182 Identities=18% Similarity=0.214 Sum_probs=110.0
Q ss_pred CCEEECCCCCHHHHHHHHHHHCCC--CCCEECCCHHHHHHHHHHCCHHHHH------H-------HHH---HHHHHCCHH
Q ss_conf 311003787425888999974246--9970205857886444203324599------9-------999---998737801
Q gi|254780545|r 182 HGVLLVGPPGTGKTLLARAVAGEA--NVPFFTISGSDFVELFVGVGASRVR------D-------MFE---QAKNNSPCI 243 (647)
Q Consensus 182 ~g~ll~GppGtGKTlla~a~a~e~--~~~f~~~~~s~~~~~~~g~g~~~vr------~-------lf~---~a~~~~p~i 243 (647)
T Consensus 26 GGvlirg~~Gtakst~~r~l~~llp~~~p~~~l--------Pl~~tedrl~G~lDi~~tL~~G~~v~~~GLLa-~A~~gv 96 (584)
T PRK13406 26 GGVVLRARAGPVRDRWLAALRALLPAGTPLRRL--------PPGIADDRLLGGLDLAATLRAGRPVAERGLLA-EADGGV 96 (584)
T ss_pred CCEEEECCCCCHHHHHHHHHHHHCCCCCCEEEC--------CCCCCHHHHCCCCCHHHHHHCCCEECCCCHHH-CCCCCE
T ss_conf 518997799957999999999756899984656--------99997415147125999997689852575333-036998
Q ss_pred EEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHC---------CCCC--CCCEEEEEECCC---CCCCCHHHCCCCCC
Q ss_conf 206323564144557898862688988998998530---------3235--778299996298---10088333165642
Q gi|254780545|r 244 VFVDEIDAVGRHRGIGLGGGNDEREQTLNQLLVEMD---------GFES--SEGVILIAATNR---PDVLDAALLRPGRF 309 (647)
Q Consensus 244 ifiDeida~~~~r~~~~~~~~~e~~~~ln~ll~~md---------g~~~--~~~v~vi~aTn~---~~~lD~al~RpgRf 309 (647)
T Consensus 97 Lyvdevnll~--------------d~lv~~Ll~a~~~G~~~vEReGiS~~~parf~LIa~deg~e~de~~~~~l~d--Rl 160 (584)
T PRK13406 97 LVLAMAERLE--------------PGTAARLAAALDAGEVAIERDGLALRMPARFGLVALDEGAEEDERAPAALAD--RL 160 (584)
T ss_pred EEEECHHHCC--------------HHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHH--HH
T ss_conf 9985147378--------------8899999999854874002587663566505899946788764311078887--65
Q ss_pred CCEEEECH-------HHHHHHHHHHHH--HHCCCCCCCCCCHHHHHHHHHCC--CH--HHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 31410001-------347889999999--85488777321102454412037--98--9999999998764553202421
Q gi|254780545|r 310 DRQITVPN-------PDIVGREHILMV--HSRNVPLAPNVILKTIARGTPGF--SG--ADLRNLVNEAALMAARRNRRLV 376 (647)
Q Consensus 310 d~~i~~~~-------P~~~~r~~i~~~--~~~~~~~~~~~d~~~la~~t~g~--sg--Adi~~~~~eAa~~a~r~~~~~i 376 (647)
T Consensus 161 a~~vd~~~~~~~~~~~~~~~~~~i~~Ar~~L~~V~i~d~-~~~~l~~~a~~~gv~g~Ra~i~~-~raArA~AAl~Gr~~V 238 (584)
T PRK13406 161 AFHLDLDGLALRDTREFPIDADDIAAARARLAAVRVPPE-AIEALCAAAAALGIASLRAPLLA-LRAARAAAALAGRTAV 238 (584)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH-HHHHHHHHHHHHCCCCCCHHHHH-HHHHHHHHHHCCCCCC
T ss_conf 070681676666401111236899999986786666999-99999999998399862099999-9999999997499978
Q ss_pred CHHHHHHHHHHCCC
Q ss_conf 04568999750136
Q gi|254780545|r 377 TMQEFEDAKDKILM 390 (647)
Q Consensus 377 ~~~dl~~A~~rv~~ 390 (647)
T Consensus 239 ~~~Dl~~Aa~LvL~ 252 (584)
T PRK13406 239 EEADIALAARLVLA 252 (584)
T ss_pred CHHHHHHHHHHHCC
T ss_conf 89999999998311