HHsearch alignment for GI: 254780545 and conserved domain: PRK13539
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional.
Probab=96.68 E-value=0.025 Score=35.83 Aligned_cols=31 Identities=42% Similarity=0.647 Sum_probs=22.8
Q ss_pred HHCCCCCC--EEECCCCCHHHHHHHHHHHCCCC
Q ss_conf 20123331--10037874258889999742469
Q gi|254780545|r 176 LGGRIPHG--VLLVGPPGTGKTLLARAVAGEAN 206 (647)
Q Consensus 176 ~g~~~p~g--~ll~GppGtGKTlla~a~a~e~~ 206 (647)
T Consensus 21 vsf~i~~Gei~~l~G~NGaGKTTLlk~i~Gl~~ 53 (206)
T PRK13539 21 LSFTLAAGEALVLTGPNGSGKTTLLRLLAGLLP 53 (206)
T ss_pred CEEEECCCCEEEEECCCCCCHHHHHHHHHCCCC
T ss_conf 078986994999989999989999999958878