HHsearch alignment for GI: 254780545 and conserved domain: PRK13946
>PRK13946 shikimate kinase; Provisional.
Probab=97.39 E-value=0.00021 Score=50.90 Aligned_cols=49 Identities=27% Similarity=0.458 Sum_probs=37.5
Q ss_pred CCEEECCCCCHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHCCHHHHHHHHHH
Q ss_conf 311003787425888999974246997020585788644420332459999999
Q gi|254780545|r 182 HGVLLVGPPGTGKTLLARAVAGEANVPFFTISGSDFVELFVGVGASRVRDMFEQ 235 (647)
Q Consensus 182 ~g~ll~GppGtGKTlla~a~a~e~~~~f~~~~~s~~~~~~~g~g~~~vr~lf~~ 235 (647)
T Consensus 21 knIvLIG~mGsGKStvGk~LA~~L~~~fiD~D~--~IE~~~g~s---I~eIF~~ 69 (195)
T PRK13946 21 RTVVLVGLMGAGKSTVGRRLATMLGLPFLDADT--EIERAARMT---IPEIFAT 69 (195)
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHCCCEEECHH--HHHHHHCCC---HHHHHHH
T ss_conf 958998999998899999999997979898859--999980998---9999998