HHsearch alignment for GI: 254780545 and conserved domain: PRK13948

Probab=97.41  E-value=0.00022  Score=50.72  Aligned_cols=53  Identities=25%  Similarity=0.374  Sum_probs=40.5

Q ss_pred             CCCCCEEECCCCCHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHCCHHHHHHHHHHH
Q ss_conf             2333110037874258889999742469970205857886444203324599999999
Q gi|254780545|r  179 RIPHGVLLVGPPGTGKTLLARAVAGEANVPFFTISGSDFVELFVGVGASRVRDMFEQA  236 (647)
Q Consensus       179 ~~p~g~ll~GppGtGKTlla~a~a~e~~~~f~~~~~s~~~~~~~g~g~~~vr~lf~~a  236 (647)
T Consensus         8 ~~~~~IvLIG~mGsGKStiGk~LA~~l~~~fiD~D--~~Ie~~~g~---sI~eIF~~~   60 (182)
T PRK13948          8 RPATFVALAGFMGTGKSRIGWELSRALALHFVDTD--KLITRVVGK---SIPEVFAQE   60 (182)
T ss_pred             CCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEECH--HHHHHHHCC---CHHHHHHHH
T ss_conf             99981898899999889999999999695988884--999998893---999999984