HHsearch alignment for GI: 254780545 and conserved domain: PTZ00112
>PTZ00112 origin recognition complex 1 protein; Provisional.
Probab=98.42 E-value=2.4e-06 Score=64.96 Aligned_cols=227 Identities=21% Similarity=0.276 Sum_probs=126.7
Q ss_pred CCCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHCCC----------C
Q ss_conf 112422569889852--8899999999987433567664201233311003787425888999974246----------9
Q gi|254780545|r 139 SGNVGSVTFKDVAGV--DEAKEDLQEIVDFLCDPQKFKRLGGRIPHGVLLVGPPGTGKTLLARAVAGEA----------N 206 (647)
Q Consensus 139 ~~~~~~v~f~dv~g~--~~~k~~~~~~v~~l~~~~~~~~~g~~~p~g~ll~GppGtGKTlla~a~a~e~----------~ 206 (647)
T Consensus 253 ~~~~~~lk~~~~vpe~lpcRe~E~~~I~~Fie~~i~--q~G--tG~cLYISGVPGTGKTATV~eVIr~L~~~~~~~~lp~ 328 (650)
T PTZ00112 253 KPIIDKLKLQLVVPEYILGREKEAKEIRTFLETGIK--QGG--TGQILYISGVPGTGKTATVYMVIKELQNKKLKGQLPW 328 (650)
T ss_pred EECCCHHEECCCCCCCCCCCHHHHHHHHHHHHHHCC--CCC--CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 203520110125774477707899999999986411--688--6656999789999800369999999999997089998
Q ss_pred CCEECCCH----------HHHHHHHHHCCH-------HHHHHHHHHHHHHCCHHEEHHHHHHHHCCCCCCCCCCCHHHHH
Q ss_conf 97020585----------788644420332-------4599999999873780120632356414455789886268898
Q gi|254780545|r 207 VPFFTISG----------SDFVELFVGVGA-------SRVRDMFEQAKNNSPCIVFVDEIDAVGRHRGIGLGGGNDEREQ 269 (647)
Q Consensus 207 ~~f~~~~~----------s~~~~~~~g~g~-------~~vr~lf~~a~~~~p~iifiDeida~~~~r~~~~~~~~~e~~~ 269 (647)
T Consensus 329 F~fVEINGMkLt~P~qaY~~L~e~Ltg~k~~~~~~A~~lL~k~F~~--~r~p~VlLvDELD~LvTkkQ~----------- 395 (650)
T PTZ00112 329 FNLFEINGVNLVHPNAAYRVFYKKLFNKKPPNALNSYKELDKLFNN--NRTPSILIVDEADYIVTKTQK----------- 395 (650)
T ss_pred CEEEEECCEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC--CCCCEEEEECHHHHHHHCCCC-----------
T ss_conf 1599973637798788999999998489888678999999998268--997189997157777636774-----------
Q ss_pred HHHHHHHHHCCCCCCCCEEEEEECCC---CCCCCHHHCCCCCCC-CEEEECHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
Q ss_conf 89989985303235778299996298---100883331656423-14100013478899999998548877732110245
Q gi|254780545|r 270 TLNQLLVEMDGFESSEGVILIAATNR---PDVLDAALLRPGRFD-RQITVPNPDIVGREHILMVHSRNVPLAPNVILKTI 345 (647)
Q Consensus 270 ~ln~ll~~mdg~~~~~~v~vi~aTn~---~~~lD~al~RpgRfd-~~i~~~~P~~~~r~~i~~~~~~~~~~~~~~d~~~l 345 (647)
T Consensus 396 VlYNLF-dWPT-~~~SkLIVIaIANTMDLPERL~~RVs--SRLGltRltF~PYt~~QL~eII~sRL~~~~~f~~dAIQl~ 471 (650)
T PTZ00112 396 VLFTLF-DWPT-KKNSKLILIIISNTMDLPYKMKPSCR--SRLAFGRLVFSPYKYQQIEKVIKERLENCEIIDHTALQLC 471 (650)
T ss_pred EEEECC-CCCC-CCCCEEEEEEEEECCCCCHHHHHHHH--HHCCCCEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHH
T ss_conf 577736-6889-88870799998506786065666655--5228850043998999999999998626777887899999
Q ss_pred HHHHHCCCHHHHHH--HHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
Q ss_conf 44120379899999--999987645532024210456899975013
Q gi|254780545|r 346 ARGTPGFSGADLRN--LVNEAALMAARRNRRLVTMQEFEDAKDKIL 389 (647)
Q Consensus 346 a~~t~g~sgAdi~~--~~~eAa~~a~r~~~~~i~~~dl~~A~~rv~ 389 (647)
T Consensus 472 ARKVAavSGDARRALdICRRAvE~~---~~~ki~~~~i~~a~n~~~ 514 (650)
T PTZ00112 472 ARRVTNYSGDMRKALQICKLAFENK---NGGKITPRDMTRASNMVL 514 (650)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHC---CCCEEEHHHHHHHHHHHH
T ss_conf 8888750314899999999999735---687342489999988885