HHsearch alignment for GI: 254780545 and conserved domain: TIGR01351
>TIGR01351 adk adenylate kinases; InterPro: IPR006259 Most members of this family are known or believed to be adenylate kinase. Adenylate kinase (ADK) 2.7.4.3 from EC converts ATP + AMP to ADP + ADP, that is, it uses ATP as a phosphate donor for AMP. Two ADK isozymes have been identified in mammalian cells. These specifically bind AMP and favour binding to ATP over other nucleotide triphosphates (AK1 is cytosolic and AK2 is located in the mitochondria). However, some members accept other nucleotide triphosphates as donors, and may be unable to use ATP, and may fail to complement adenylate kinase mutants. An example of a nucleoside-triphosphate--adenylate kinase (2.7.4.10 from EC) is Q9UIJ7 from SWISSPROT, a GTP:AMP phosphotransferase that has been identified in bovine heart and human cells and derived from mitrochondrail GTP AMP that is specific for the phosphorylation of AMP, but can only use GTP or ITP as a substrate .This family is designated subfamily rather than equivalog for this reason. ADK has also been identified in different bacterial species and in yeast . Two further enzymes are known to be related to the ADK family, i.e. yeast uridine monophosphokinase and slime mold UMP-CMP kinase. Within the ADK family there are several conserved regions, including the ATP-binding domains. One of the most conserved areas includes an Arg residue, whose modification inactivates the enzyme, together with an Asp that resides in the catalytic cleft of the enzyme and participates in a salt bridge. ; GO: 0005524 ATP binding, 0016776 phosphotransferase activity phosphate group as acceptor, 0019201 nucleotide kinase activity, 0006139 nucleobase nucleoside nucleotide and nucleic acid metabolic process.
Probab=96.39 E-value=0.0034 Score=42.07 Aligned_cols=185 Identities=25% Similarity=0.332 Sum_probs=102.4
Q ss_pred EEECCCCCHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHC-CHHEEHHHHHHH-HCCCCCCCC
Q ss_conf 100378742588899997424699702058578864442033245999999998737-801206323564-144557898
Q gi|254780545|r 184 VLLVGPPGTGKTLLARAVAGEANVPFFTISGSDFVELFVGVGASRVRDMFEQAKNNS-PCIVFVDEIDAV-GRHRGIGLG 261 (647)
Q Consensus 184 ~ll~GppGtGKTlla~a~a~e~~~~f~~~~~s~~~~~~~g~g~~~vr~lf~~a~~~~-p~iifiDeida~-~~~r~~~~~ 261 (647)
T Consensus 2 ~~~lGpPGsGKGTQa~~i~~~~gl~HIST----------G-------DllR~~~~~~T~LG~~~k~---y~y~~~G~-LV 60 (232)
T TIGR01351 2 LILLGPPGSGKGTQAKRIAEKLGLPHIST----------G-------DLLRAAVKAGTPLGKKAKE---YNYMDKGE-LV 60 (232)
T ss_pred EEEECCCCCCHHHHHHHHHHHCCCCCCCC----------H-------HHHHHHHHHCCHHHHHHHC---CCCCCCCC-CC
T ss_conf 46755989876679999998608850202----------5-------8999998707977898732---67200377-57
Q ss_pred CCCHHHHHHHHHHHH-HHCCC-CC-----CCCEEEEE---ECCCCCCCCHHHCCCCC-CCCEEEECHHH-HHHHHHHHHH
Q ss_conf 862688988998998-53032-35-----77829999---62981008833316564-23141000134-7889999999
Q gi|254780545|r 262 GGNDEREQTLNQLLV-EMDGF-ES-----SEGVILIA---ATNRPDVLDAALLRPGR-FDRQITVPNPD-IVGREHILMV 329 (647)
Q Consensus 262 ~~~~e~~~~ln~ll~-~mdg~-~~-----~~~v~vi~---aTn~~~~lD~al~RpgR-fd~~i~~~~P~-~~~r~~i~~~ 329 (647)
T Consensus 61 --PD---~~v~~lv~~rl~~~~~~~~~~~~~GfILDGfPRT~~QAeaL~~~l~~~g~~~d~V~~L~vp~~e~l~~R~~gR 135 (232)
T TIGR01351 61 --PD---EIVNQLVKERLQQNPDCVSLKSENGFILDGFPRTLSQAEALDAMLKELGLPIDAVIELDVPDLEELVERITGR 135 (232)
T ss_pred --CH---HHHHHHHHHHHHCCCCCEEEEECCCEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHCC
T ss_conf --78---9999999999745600011010686266388887899999999998618984178885358799999977327
Q ss_pred HHCCCCCCCCCCHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 8548877732110245441203-798999999999876455320242104568999750136865567666866778999
Q gi|254780545|r 330 HSRNVPLAPNVILKTIARGTPG-FSGADLRNLVNEAALMAARRNRRLVTMQEFEDAKDKILMGAERRSTAMTEEEKKITA 408 (647)
Q Consensus 330 ~~~~~~~~~~~d~~~la~~t~g-~sgAdi~~~~~eAa~~a~r~~~~~i~~~dl~~A~~rv~~G~ek~~~~~~~~ek~~vA 408 (647)
T Consensus 136 ~~cp-~cG~~Yh~~f~pPk~~gG~~~cD~~~----~~~l~qR~-------DD~~evv-----------------~~RL~~ 186 (232)
T TIGR01351 136 RICP-SCGRVYHIKFNPPKVPGGENLCDDCG----GELLIQRE-------DDTEEVV-----------------KKRLEV 186 (232)
T ss_pred CCCC-CCCCEEEECCCCCCCCCCCCCCCCCC----CCEEEEEC-------CCCHHHH-----------------HHHHHH
T ss_conf 3306-77855610227886787679886445----75027706-------9988999-----------------999999
Q ss_pred HHHHHHHHHHHHCCC
Q ss_conf 999999999985058
Q gi|254780545|r 409 YHEAGHAVVACHVPK 423 (647)
Q Consensus 409 yHEAGHAlva~~l~~ 423 (647)
T Consensus 187 Y~~~t~Pli~yY~~~ 201 (232)
T TIGR01351 187 YKEQTEPLIDYYRKK 201 (232)
T ss_pred HHHHCCHHHHHHHHC
T ss_conf 888520089999846