HHsearch alignment for GI: 254780545 and conserved domain: TIGR02928
>TIGR02928 TIGR02928 orc1/cdc6 family replication initiation protein; InterPro: IPR014277 This set of DNA binding proteins shows homology to the origin recognition complex subunit 1/cell division control protein 6 family in eukaryotes. The proteins in this entry are found exclusively in the archaea. Several members may be found in a genome and interact with each other..
Probab=99.37 E-value=5.2e-11 Score=98.66 Aligned_cols=225 Identities=24% Similarity=0.322 Sum_probs=143.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCCCEEECCCCCHHHHHHHHHHHCC-------CCCC-EE--CCCH---
Q ss_conf 89852889999999998743356766420-123331100378742588899997424-------6997-02--0585---
Q gi|254780545|r 149 DVAGVDEAKEDLQEIVDFLCDPQKFKRLG-GRIPHGVLLVGPPGTGKTLLARAVAGE-------ANVP-FF--TISG--- 214 (647)
Q Consensus 149 dv~g~~~~k~~~~~~v~~l~~~~~~~~~g-~~~p~g~ll~GppGtGKTlla~a~a~e-------~~~~-f~--~~~~--- 214 (647)
T Consensus 18 ~i~hRdeqI~~l~---~~L~~-----~l~PG~~P~Ni~iYGkTGtGKT~vt~~v~~~l~~~~~~~d~~D~~~~~~NC~~~ 89 (383)
T TIGR02928 18 RIVHRDEQIEELA---KALRP-----ILRPGSRPSNIFIYGKTGTGKTAVTKYVMKELEEAAEDRDVRDVSTVYINCQIL 89 (383)
T ss_pred CCCCCHHHHHHHH---HHHHH-----HHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC
T ss_conf 4668678999999---99887-----506748987258878889878899999999999986226997158999778546
Q ss_pred -------HHHHHHH----H-------HCCHH-HHHHHHHHHH-HHCCHHEEH-HHHHHHHCCCCCCCCCCCHH--HHHHH
Q ss_conf -------7886444----2-------03324-5999999998-737801206-32356414455789886268--89889
Q gi|254780545|r 215 -------SDFVELF----V-------GVGAS-RVRDMFEQAK-NNSPCIVFV-DEIDAVGRHRGIGLGGGNDE--REQTL 271 (647)
Q Consensus 215 -------s~~~~~~----~-------g~g~~-~vr~lf~~a~-~~~p~iifi-Deida~~~~r~~~~~~~~~e--~~~~l 271 (647)
T Consensus 90 ~T~y~~~~~L~~~ln~~~~~~~vP~tG~s~~~~~~~l~~~l~~~~~~~~~ivLDEiD~Lv-~~~~------d~PAyS~~L 162 (383)
T TIGR02928 90 DTSYQVLVELANQLNRRGSGEEVPTTGLSTSEVFRELYKELNRERGDSLIIVLDEIDKLV-RKDD------DDPAYSKLL 162 (383)
T ss_pred CCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHH-CCCC------CCHHHHHHH
T ss_conf 846999999999851577888898877878999999999983201887999862310221-5888------880787885
Q ss_pred HHHHHHH-CCCCCCCCEEEEEECCCC---CCCCHHHCCCCCCCCEEEECHHHHHHHHHHHHHHH-CCCCCCCCCCH----
Q ss_conf 9899853-032357782999962981---00883331656423141000134788999999985-48877732110----
Q gi|254780545|r 272 NQLLVEM-DGFESSEGVILIAATNRP---DVLDAALLRPGRFDRQITVPNPDIVGREHILMVHS-RNVPLAPNVIL---- 342 (647)
Q Consensus 272 n~ll~~m-dg~~~~~~v~vi~aTn~~---~~lD~al~RpgRfd~~i~~~~P~~~~r~~i~~~~~-~~~~~~~~~d~---- 342 (647)
T Consensus 163 Y~L~Ra~~~~~~~~~~vgvIgISND~~f~~~Ld~RVkS-sL~~eei~FpPYdA~eL~~IL~~R~v~-~AF~dGvl~d~VI 240 (383)
T TIGR02928 163 YQLSRARENGDLENAKVGVIGISNDLKFRENLDPRVKS-SLCEEEIVFPPYDAEELRDILENRAVE-KAFYDGVLDDGVI 240 (383)
T ss_pred HHHHHHHHCCCCCCCCEEEEEEECCCHHHHHCCCCEEC-CCCCCCCEECCCCHHHHHHHHHHHHHH-HCCCCCCCCHHHH
T ss_conf 34331000357788534899986571436445753013-248740040798869999999720312-0336885462279
Q ss_pred ---HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC-CCC
Q ss_conf ---2454412037989999999998764553202421045689997501-368
Q gi|254780545|r 343 ---KTIARGTPGFSGADLRNLVNEAALMAARRNRRLVTMQEFEDAKDKI-LMG 391 (647)
Q Consensus 343 ---~~la~~t~g~sgAdi~~~~~eAa~~a~r~~~~~i~~~dl~~A~~rv-~~G 391 (647)
T Consensus 241 ~lcAA~aAq~hG-DAR~AiDLLR~AGe~A~~~g~~~Vt~~HV~~A~e~~PE~~ 292 (383)
T TIGR02928 241 PLCAALAAQEHG-DARKAIDLLRVAGEIAEREGAERVTEDHVEEAQEKIPEVD 292 (383)
T ss_pred HHHHHHHHCCCC-CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHH
T ss_conf 999998620678-7899999999876875315763100888999998322288