HHsearch alignment for GI: 254780545 and conserved domain: cd00009

>cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, RecA-like, VirD4-like, PilT-like, and SF1/2 helicases. Members of the AAA+ ATPases function as molecular chaperons, ATPase subunits of proteases, helicases, or nucleic-acid stimulated ATPases. The AAA+ proteins contain several distinct features in addition to the conserved alpha-beta-alpha core domain structure and the Walker A and B motifs of the P-loop NTPases.
Probab=99.83  E-value=2.8e-20  Score=165.72  Aligned_cols=129  Identities=39%  Similarity=0.516  Sum_probs=100.7

Q ss_pred             CCCCCEEECCCCCHHHHHHHHHHHCCC---CCCEECCCHHHHHHHHHHCCHHHH---HHHHHHHHHHCCHHEEHHHHHHH
Q ss_conf             233311003787425888999974246---997020585788644420332459---99999998737801206323564
Q gi|254780545|r  179 RIPHGVLLVGPPGTGKTLLARAVAGEA---NVPFFTISGSDFVELFVGVGASRV---RDMFEQAKNNSPCIVFVDEIDAV  252 (647)
Q Consensus       179 ~~p~g~ll~GppGtGKTlla~a~a~e~---~~~f~~~~~s~~~~~~~g~g~~~v---r~lf~~a~~~~p~iifiDeida~  252 (647)
T Consensus        17 ~~~~~ill~GppGtGKT~la~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~iDEi~~l   96 (151)
T cd00009          17 PPPKNLLLYGPPGTGKTTLARAIANELFRPGAPFLYLNASDLLEGLVVAELFGHFLVRLLFELAEKAKPGVLFIDEIDSL   96 (151)
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHC
T ss_conf             79980899899998865999999997121379827854777046777757605778898999999769986982016655


Q ss_pred             HCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHCCCCCCCCEEEECH
Q ss_conf             14455789886268898899899853032357782999962981008833316564231410001
Q gi|254780545|r  253 GRHRGIGLGGGNDEREQTLNQLLVEMDGFESSEGVILIAATNRPDVLDAALLRPGRFDRQITVPN  317 (647)
Q Consensus       253 ~~~r~~~~~~~~~e~~~~ln~ll~~mdg~~~~~~v~vi~aTn~~~~lD~al~RpgRfd~~i~~~~  317 (647)
T Consensus        97 ~~~----------~~~~~~~~l~~~~~~~~~~~~~~vI~~tn~~~~~~~~~~~~~R~~~~i~~~~  151 (151)
T cd00009          97 SRG----------AQNALLRVLETLNDLRIDRENVRVIGATNRPLLGDLDRALYDRLDIRIVIPL  151 (151)
T ss_pred             CHH----------HHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHCCCCEEEECCC
T ss_conf             999----------9999999998715754067888999952899886837764255986986389