HHsearch alignment for GI: 254780545 and conserved domain: cd01393

>cd01393 recA_like RecA is a bacterial enzyme which has roles in homologous recombination, DNA repair, and the induction of the SOS response. RecA couples ATP hydrolysis to DNA strand exchange. While prokaryotes have a single RecA protein, eukaryotes have multiple RecA homologs such as Rad51, DMC1 and Rad55/57. Archaea have the RecA-like homologs radA and radB.
Probab=97.68  E-value=9.9e-05  Score=53.21  Aligned_cols=34  Identities=47%  Similarity=0.708  Sum_probs=27.2

Q ss_pred             HHHCCCCCC--EEECCCCCHHHHHHHHHHHCCCCCC
Q ss_conf             420123331--1003787425888999974246997
Q gi|254780545|r  175 RLGGRIPHG--VLLVGPPGTGKTLLARAVAGEANVP  208 (647)
Q Consensus       175 ~~g~~~p~g--~ll~GppGtGKTlla~a~a~e~~~~  208 (647)
T Consensus        11 ~LgGGip~G~ItEi~G~~gsGKT~l~lqla~~~q~~   46 (226)
T cd01393          11 LLGGGIPTGRITEIFGEFGSGKTQLCLQLAVEAQLP   46 (226)
T ss_pred             HHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCC
T ss_conf             857998888399999999998999999999998542