>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.

Probab=96.57  E-value=0.026  Score=35.70  Aligned_cols=31  Identities=35%  Similarity=0.646  Sum_probs=24.8

Q ss_pred             HHHHCCCCCC--EEECCCCCHHHHHHHHHHHCC
Q ss_conf             6420123331--100378742588899997424
Q gi|254780545|r  174 KRLGGRIPHG--VLLVGPPGTGKTLLARAVAGE  204 (647)
Q Consensus       174 ~~~g~~~p~g--~ll~GppGtGKTlla~a~a~e  204 (647)
T Consensus        24 ~~is~~i~~Ge~~~llGpnGaGKSTLl~~l~g~   56 (192)
T cd03232          24 NNISGYVKPGTLTALMGESGAGKTTLLDVLAGR   56 (192)
T ss_pred             ECCEEEEECCEEEEEECCCCCCHHHHHHHHHCC
T ss_conf             883889928839999999999889999998379