HHsearch alignment for GI: 254780545 and conserved domain: cd03255
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=96.76 E-value=0.0096 Score=38.85 Aligned_cols=31 Identities=35% Similarity=0.622 Sum_probs=20.5
Q ss_pred HHCCCCCC--EEECCCCCHHHHHHHHHHHCCCC
Q ss_conf 20123331--10037874258889999742469
Q gi|254780545|r 176 LGGRIPHG--VLLVGPPGTGKTLLARAVAGEAN 206 (647)
Q Consensus 176 ~g~~~p~g--~ll~GppGtGKTlla~a~a~e~~ 206 (647)
T Consensus 23 isl~i~~Ge~~~iiG~sGsGKTTll~~i~Gl~~ 55 (218)
T cd03255 23 VSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDR 55 (218)
T ss_pred EEEEECCCCEEEEECCCCCHHHHHHHHHHCCCC
T ss_conf 289986998999999999869999999966999