HHsearch alignment for GI: 254780545 and conserved domain: cd03288
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=96.22 E-value=0.011 Score=38.32 Aligned_cols=35 Identities=29% Similarity=0.379 Sum_probs=26.9
Q ss_pred HHHHHHCCCCCC--EEECCCCCHHHHHHHHHHHCCCC
Q ss_conf 766420123331--10037874258889999742469
Q gi|254780545|r 172 KFKRLGGRIPHG--VLLVGPPGTGKTLLARAVAGEAN 206 (647)
Q Consensus 172 ~~~~~g~~~p~g--~ll~GppGtGKTlla~a~a~e~~ 206 (647)
T Consensus 36 vL~~inl~I~~Ge~vaIvG~sGsGKSTL~~ll~gl~~ 72 (257)
T cd03288 36 VLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVD 72 (257)
T ss_pred CEECEEEEECCCCEEEEECCCCCCHHHHHHHHHHCCC
T ss_conf 3105389987999999999999819999999960566