HHsearch alignment for GI: 254780545 and conserved domain: cd03369
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=96.47 E-value=0.02 Score=36.55 Aligned_cols=35 Identities=26% Similarity=0.357 Sum_probs=27.0
Q ss_pred HHHHHHCCCCCC--EEECCCCCHHHHHHHHHHHCCCC
Q ss_conf 766420123331--10037874258889999742469
Q gi|254780545|r 172 KFKRLGGRIPHG--VLLVGPPGTGKTLLARAVAGEAN 206 (647)
Q Consensus 172 ~~~~~g~~~p~g--~ll~GppGtGKTlla~a~a~e~~ 206 (647)
T Consensus 23 iL~~isl~i~~Ge~v~ivG~sGsGKSTLl~ll~g~~~ 59 (207)
T cd03369 23 VLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLE 59 (207)
T ss_pred CEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHCC
T ss_conf 2402588986999999999999879999999998728