HHsearch alignment for GI: 254780545 and conserved domain: pfam01202

>pfam01202 SKI Shikimate kinase.
Probab=94.66  E-value=0.04  Score=34.34  Aligned_cols=42  Identities=29%  Similarity=0.530  Sum_probs=31.3

Q ss_pred             CCHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHCCHHHHHHHHHHH
Q ss_conf             74258889999742469970205857886444203324599999999
Q gi|254780545|r  190 PGTGKTLLARAVAGEANVPFFTISGSDFVELFVGVGASRVRDMFEQA  236 (647)
Q Consensus       190 pGtGKTlla~a~a~e~~~~f~~~~~s~~~~~~~g~g~~~vr~lf~~a  236 (647)
T Consensus         1 mGsGKstigk~LA~~L~~~fiD~D~--~ie~~~g~---si~eif~~~   42 (158)
T pfam01202         1 MGAGKTTIGRLLAKALGLPFIDTDQ--EIEKRTGM---SIAEIFEEE   42 (158)
T ss_pred             CCCCHHHHHHHHHHHHCCCEEECHH--HHHHHHCC---CHHHHHHHH
T ss_conf             9897799999999996999788729--99988788---999999981