HHsearch alignment for GI: 254780545 and conserved domain: pfam01202
>pfam01202 SKI Shikimate kinase.
Probab=94.66 E-value=0.04 Score=34.34 Aligned_cols=42 Identities=29% Similarity=0.530 Sum_probs=31.3
Q ss_pred CCHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHCCHHHHHHHHHHH
Q ss_conf 74258889999742469970205857886444203324599999999
Q gi|254780545|r 190 PGTGKTLLARAVAGEANVPFFTISGSDFVELFVGVGASRVRDMFEQA 236 (647)
Q Consensus 190 pGtGKTlla~a~a~e~~~~f~~~~~s~~~~~~~g~g~~~vr~lf~~a 236 (647)
T Consensus 1 mGsGKstigk~LA~~L~~~fiD~D~--~ie~~~g~---si~eif~~~ 42 (158)
T pfam01202 1 MGAGKTTIGRLLAKALGLPFIDTDQ--EIEKRTGM---SIAEIFEEE 42 (158)
T ss_pred CCCCHHHHHHHHHHHHCCCEEECHH--HHHHHHCC---CHHHHHHHH
T ss_conf 9897799999999996999788729--99988788---999999981