HHsearch alignment for GI: 254780545 and conserved domain: pfam04851
>pfam04851 ResIII Type III restriction enzyme, res subunit.
Probab=93.30 E-value=0.094 Score=31.67 Aligned_cols=53 Identities=26% Similarity=0.389 Sum_probs=32.6
Q ss_pred EEECCCCCHHHHHHHHHHHCCC---CCCEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHEEHHHHHHH
Q ss_conf 1003787425888999974246---99702058578864442033245999999998737801206323564
Q gi|254780545|r 184 VLLVGPPGTGKTLLARAVAGEA---NVPFFTISGSDFVELFVGVGASRVRDMFEQAKNNSPCIVFVDEIDAV 252 (647)
Q Consensus 184 ~ll~GppGtGKTlla~a~a~e~---~~~f~~~~~s~~~~~~~g~g~~~vr~lf~~a~~~~p~iifiDeida~ 252 (647)
T Consensus 21 ~~i~~pTGsGKT~~~~~~i~~~~~~~~~~lvlvp~--------------~~L~~Q~~~~~--lii~DE~H~~ 76 (103)
T pfam04851 21 GLIVMATGSGKTLTAAKLIARLLKGKKKVLFLVPR--------------KDLLEQALEEF--VIIIDEAHHS 76 (103)
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECC--------------HHHHHHHHHHH--HHHHHHHHHC
T ss_conf 69995899987999999999998469929999082--------------99999999965--6460163523