HHsearch alignment for GI: 254780545 and conserved domain: pfam08433
>pfam08433 KTI12 Chromatin associated protein KTI12. This is a family of chromatin associated proteins which interact with the Elongator complex, a component of the elongating form of RNA polymerase II. The Elongator complex has histone acetyltransferase activity.
Probab=94.70 E-value=0.11 Score=31.22 Aligned_cols=81 Identities=16% Similarity=0.259 Sum_probs=48.6
Q ss_pred EEECCCCCHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHEEHHHHHHHHCCCCCCCCCC
Q ss_conf 10037874258889999742469970205857886444203324599999999873780120632356414455789886
Q gi|254780545|r 184 VLLVGPPGTGKTLLARAVAGEANVPFFTISGSDFVELFVGVGASRVRDMFEQAKNNSPCIVFVDEIDAVGRHRGIGLGGG 263 (647)
Q Consensus 184 ~ll~GppGtGKTlla~a~a~e~~~~f~~~~~s~~~~~~~g~g~~~vr~lf~~a~~~~p~iifiDeida~~~~r~~~~~~~ 263 (647)
T Consensus 2 ivl~G~P~SGKSt~A~~L~~~l----------------------------~~--~~~-~v~vi~d-~~~~~~~~~-y~~s 48 (266)
T pfam08433 2 IILTGLPSSGKSTRAKELAKYL----------------------------EE--KGY-DVIVISD-ESLGIESDD-YKDS 48 (266)
T ss_pred EEEECCCCCCHHHHHHHHHHHH----------------------------HH--CCC-EEEEECC-CCCCCCCCC-CCCC
T ss_conf 7985799996889999999999----------------------------97--599-3899780-012675310-0010
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCC
Q ss_conf 26889889989985303235778299996298100
Q gi|254780545|r 264 NDEREQTLNQLLVEMDGFESSEGVILIAATNRPDV 298 (647)
Q Consensus 264 ~~e~~~~ln~ll~~mdg~~~~~~v~vi~aTn~~~~ 298 (647)
T Consensus 49 ~~Ek-~~R~~l~s~v~r~Ls~~~iVIlD~~NYiKG 82 (266)
T pfam08433 49 KKEK-FLRGSLRSAVKRDLSKNTIVIVDSLNYIKG 82 (266)
T ss_pred HHHH-HHHHHHHHHHHHHHCCCCEEEECCCCCHHH
T ss_conf 4789-999999999987516688899548740456