RPSBLAST alignment for GI: 254780545 and conserved domain: smart00382
>gnl|CDD|128665 smart00382, AAA, ATPases associated with a variety of cellular activities. AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment. Length = 148
Score = 85.1 bits (210), Expect = 5e-17
Identities = 46/156 (29%), Positives = 66/156 (42%), Gaps = 26/156 (16%)
Query: 181 PHGVLLVGPPGTGKTLLARAVAGEANVP---FFTISGSDFVE--------------LFVG 223
+L+VGPPG+GKT LARA+A E P I G D +E G
Sbjct: 2 GEVILIVGPPGSGKTTLARALARELGPPGGGVIYIDGEDILEEVLDQLLLIIVGGKKASG 61
Query: 224 VGASRVRDMFEQAKNNSPCIVFVDEIDAVGRHRGIGLGGGNDEREQTLNQLLVEMDGFES 283
G R+R A+ P ++ +DEI ++ E L + L + +S
Sbjct: 62 SGELRLRLALALARKLKPDVLILDEITSLLDAEQ--------EALLLLLEELRLLLLLKS 113
Query: 284 SEGVILIAATNRPDVLDAALLRPGRFDRQITVPNPD 319
+ + +I TN L ALLR RFDR+I +
Sbjct: 114 EKNLTVILTTNDEKDLGPALLRR-RFDRRIVLLLIL 148