RPSBLAST alignment for GI: 254780545 and conserved domain: KOG0733

>gnl|CDD|35952 KOG0733, KOG0733, KOG0733, Nuclear AAA ATPase (VCP subfamily) [Posttranslational modification, protein turnover, chaperones]. Length = 802

 Score =  210 bits (536), Expect = 1e-54
 Identities = 101/235 (42%), Positives = 143/235 (60%), Gaps = 8/235 (3%)

Query: 142 VGSVTFKDVAGVDEAKEDLQE-IVDFLCDPQKFKRLGGRIPHGVLLVGPPGTGKTLLARA 200
           V  VT+ D+  ++E + +L   I+  +  P  FK LG   P GVLL GPPG GKTLLA+A
Sbjct: 505 VPDVTWDDIGALEEVRLELNMAILAPIKRPDLFKALGIDAPSGVLLCGPPGCGKTLLAKA 564

Query: 201 VAGEANVPFFTISGSDFVELFVGVGASRVRDMFEQAKNNSPCIVFVDEIDAVGRHRGIGL 260
           VA EA   F ++ G + +  +VG     VR +F++A+ ++PC++F DEIDA+   R    
Sbjct: 565 VANEAGANFISVKGPELLNKYVGESERAVRQVFQRARASAPCVIFFDEIDALVPRRSDEG 624

Query: 261 GGGNDEREQTLNQLLVEMDGFESSEGVILIAATNRPDVLDAALLRPGRFDRQITVPNPDI 320
              +    + +NQLL E+DG E   GV +IAATNRPD++D A+LRPGR D+ + V  P+ 
Sbjct: 625 SSVSS---RVVNQLLTELDGLEERRGVYVIAATNRPDIIDPAILRPGRLDKLLYVGLPNA 681

Query: 321 VGREHILMVHSRN--VPLAPNVILKTIARGT--PGFSGADLRNLVNEAALMAARR 371
             R  IL   ++N   PL+ +V L  IAR T   GF+GADL  LV EA+++A R 
Sbjct: 682 EERVAILKTITKNTKPPLSSDVDLDEIARNTKCEGFTGADLAALVREASILALRE 736