HHsearch alignment for GI: 254780546 and conserved domain: PRK01269
>PRK01269 thiamine biosynthesis protein ThiI; Provisional.
Probab=98.25 E-value=2.7e-05 Score=56.49 Aligned_cols=146 Identities=15% Similarity=0.100 Sum_probs=94.4
Q ss_pred CCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHH-HHHHCC----CCEEEEEEECC
Q ss_conf 9983999966942489999999999986489972999999667798784689999999-998718----98899997504
Q gi|254780546|r 18 YPAHILVAVSGGSDSMGLLIALHSVLSDRSFGKIKFSAISVDHCLRETAKDEVRYVSD-VCSRLR----IAHSVVSWKNS 92 (423)
Q Consensus 18 ~~~~i~vAvSGG~DS~aLl~ll~~~~~~~~~~~~~l~a~~vdHglr~~s~~e~~~v~~-~~~~lg----i~~~~~~~~~~ 92 (423)
T Consensus 176 tqGkvL~LlSGGiDSPVAa~~mmK----R---G~~v~~l~F~lg~~-~~e~~V~~va~~L~~~~~~~~~vr~~~V~f~~v 247 (483)
T PRK01269 176 TQEDVLSLISGGFDSGVASYMLMR----R---GSRVHYCFFNLGGA-AHEIGVKQVAHYLWNRYGSSHRVRFISVDFEPV 247 (483)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHH----C---CCEEEEEEECCCCH-HHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHH
T ss_conf 778689995278883888999984----5---98799999579986-889999999999999738888708999767999
Q ss_pred -------CCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf -------7877803788854555543200123442012345666566899998623654443322357641003579687
Q gi|254780546|r 93 -------KPQTGLMAAAREARYALISEHAKTINATLIMTAHTFDDQLETVYMRSQRDYAEKGMGLSGMCDTILYDLNLWI 165 (423)
Q Consensus 93 -------~~~~~~~~~ar~~r~~~~~~~~~~~~~~~l~~ah~~dD~~Et~l~rl~r~sg~~g~~l~~~~~~~~~~~~~~i 165 (423)
T Consensus 248 ~~eI~~~v~~~~~~vv~KR~M~R~A~~iA~~~g~~ALVTGESLGQVASQTL~NL~~i~---------------~~~~~pV 312 (483)
T PRK01269 248 VGEILEKVDNGQMGVVLKRMMLRAASKVAERYGIQALVTGEALGQVSSQTLTNLRLID---------------NVTDTLI 312 (483)
T ss_pred HHHHHHHCCHHHEEHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHH---------------HHCCCCE
T ss_conf 9999873876344399999999999999998599889855503456776787889988---------------7407740
Q ss_pred ECCHHCCCHHHHHHHHHHHCC
Q ss_conf 101210428999998998189
Q gi|254780546|r 166 SRPFLRCRREDIRSFLLQRNI 186 (423)
Q Consensus 166 ~RPLL~~~r~~l~~~~~~~~i 186 (423)
T Consensus 313 lRPLIg~DK~eII~~Ar~IGT 333 (483)
T PRK01269 313 LRPLIAMDKEDIIDLARQIGT 333 (483)
T ss_pred ECCCCCCCHHHHHHHHHHHCH
T ss_conf 047667988999999998392