HHsearch alignment for GI: 254780546 and conserved domain: TIGR00364
>TIGR00364 TIGR00364 exsB protein; InterPro: IPR004479 This protein family is represented by a single member in nearly every completed large (> 1000 genes) prokaryotic genome. In Sinorhizobium meliloti, a species in which the exo genes make succinoglycan, a symbiotically important exopolysaccharide, exsB is located nearby and affects succinoglycan levels, probably through polar effects on exsA expression or the same polycistronic mRNA , . In Arthrobacter viscosus, the homologous gene is designated alu1 and is associated with an aluminum tolerance phenotype. When expressed in Escherichia coli, it conferred aliminium tolerance . The entry also contains the gene queC, which is responsible for the conversion of GTP to 7-cyano-7-deazaguanine (preQ0). The biosynthesis of hypermodified tRNA nucleoside queuosine only occurs in eubacteria. It occupies the wobble position for all known tRNAs that are specific for Asp, Asn, His or Tyr ..
Probab=98.84 E-value=2.6e-08 Score=77.75 Aligned_cols=151 Identities=19% Similarity=0.218 Sum_probs=103.2
Q ss_pred EEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEE-EEEEECCC--------
Q ss_conf 999669424899999999999864899729999996677987846899999999987189889-99975047--------
Q gi|254780546|r 23 LVAVSGGSDSMGLLIALHSVLSDRSFGKIKFSAISVDHCLRETAKDEVRYVSDVCSRLRIAHS-VVSWKNSK-------- 93 (423)
Q Consensus 23 ~vAvSGG~DS~aLl~ll~~~~~~~~~~~~~l~a~~vdHglr~~s~~e~~~v~~~~~~lgi~~~-~~~~~~~~-------- 93 (423)
T Consensus 2 v~~lSGG~DStT~~~~a~~~-----~GkyeV~a~TF~YGQR~H-~~Ele~A~~ia~~Lgi~~~~~~Dl~~l~~l~~YsaL 75 (227)
T TIGR00364 2 VVVLSGGQDSTTVLLIALDE-----GGKYEVHAITFDYGQRAH-SRELESARKIAEALGIRHHFVIDLSLLKQLGKYSAL 75 (227)
T ss_pred EEEEECCHHHHHHHHHHHHC-----CCCEEEEEECCCCHHHHH-HHHHHHHHHHHHHHCCCCEEEECHHHHHHHHCCCCC
T ss_conf 68743734689999999961-----795079985465013789-999999999999808970786177999855404523
Q ss_pred --------CCCCCHH------HHHH--------HHHHHHHHHCCCCCCCCHHHHHHHHH------HHHHHHHHHHCCCCC
Q ss_conf --------8778037------8885--------45555432001234420123456665------668999986236544
Q gi|254780546|r 94 --------PQTGLMA------AARE--------ARYALISEHAKTINATLIMTAHTFDD------QLETVYMRSQRDYAE 145 (423)
Q Consensus 94 --------~~~~~~~------~ar~--------~r~~~~~~~~~~~~~~~l~~ah~~dD------~~Et~l~rl~r~sg~ 145 (423)
T Consensus 76 t~~~~~~~~~~~e~d~~~~~E~~p~tfVPgRN~~fl~~a~~yA~~~gA~~v~~G~~~~DfSgYPDCr~EFvka~n~~--- 152 (227)
T TIGR00364 76 TDEQEIPEQKSNEEDKEKALETLPNTFVPGRNLIFLSLAASYAEALGAEAVITGVCETDFSGYPDCRDEFVKALNHA--- 152 (227)
T ss_pred CCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH---
T ss_conf 57875676666532023565311333378047999999999888618425220010003657988868899999999---
Q ss_pred CCCCCCCCCCCCCCCCCCEEECCHHCCCHHHHHHHHHHHC
Q ss_conf 4332235764100357968710121042899999899818
Q gi|254780546|r 146 KGMGLSGMCDTILYDLNLWISRPFLRCRREDIRSFLLQRN 185 (423)
Q Consensus 146 ~g~~l~~~~~~~~~~~~~~i~RPLL~~~r~~l~~~~~~~~ 185 (423)
T Consensus 153 --l~Lgn~~~~-v~i~Piql~aPL~~ltKaeiv~la~elG 189 (227)
T TIGR00364 153 --LNLGNMLTP-VEIRPIQLEAPLMDLTKAEIVKLADELG 189 (227)
T ss_pred --HHHHCCCCC-CEEEEEEEECCEEECCHHHHHHHHHHHC
T ss_conf --997412688-1120246666701269899999988735