HHsearch alignment for GI: 254780546 and conserved domain: TIGR00364

>TIGR00364 TIGR00364 exsB protein; InterPro: IPR004479 This protein family is represented by a single member in nearly every completed large (> 1000 genes) prokaryotic genome. In Sinorhizobium meliloti, a species in which the exo genes make succinoglycan, a symbiotically important exopolysaccharide, exsB is located nearby and affects succinoglycan levels, probably through polar effects on exsA expression or the same polycistronic mRNA , . In Arthrobacter viscosus, the homologous gene is designated alu1 and is associated with an aluminum tolerance phenotype. When expressed in Escherichia coli, it conferred aliminium tolerance . The entry also contains the gene queC, which is responsible for the conversion of GTP to 7-cyano-7-deazaguanine (preQ0). The biosynthesis of hypermodified tRNA nucleoside queuosine only occurs in eubacteria. It occupies the wobble position for all known tRNAs that are specific for Asp, Asn, His or Tyr ..
Probab=98.84  E-value=2.6e-08  Score=77.75  Aligned_cols=151  Identities=19%  Similarity=0.218  Sum_probs=103.2

Q ss_pred             EEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEE-EEEEECCC--------
Q ss_conf             999669424899999999999864899729999996677987846899999999987189889-99975047--------
Q gi|254780546|r   23 LVAVSGGSDSMGLLIALHSVLSDRSFGKIKFSAISVDHCLRETAKDEVRYVSDVCSRLRIAHS-VVSWKNSK--------   93 (423)
Q Consensus        23 ~vAvSGG~DS~aLl~ll~~~~~~~~~~~~~l~a~~vdHglr~~s~~e~~~v~~~~~~lgi~~~-~~~~~~~~--------   93 (423)
T Consensus         2 v~~lSGG~DStT~~~~a~~~-----~GkyeV~a~TF~YGQR~H-~~Ele~A~~ia~~Lgi~~~~~~Dl~~l~~l~~YsaL   75 (227)
T TIGR00364         2 VVVLSGGQDSTTVLLIALDE-----GGKYEVHAITFDYGQRAH-SRELESARKIAEALGIRHHFVIDLSLLKQLGKYSAL   75 (227)
T ss_pred             EEEEECCHHHHHHHHHHHHC-----CCCEEEEEECCCCHHHHH-HHHHHHHHHHHHHHCCCCEEEECHHHHHHHHCCCCC
T ss_conf             68743734689999999961-----795079985465013789-999999999999808970786177999855404523


Q ss_pred             --------CCCCCHH------HHHH--------HHHHHHHHHCCCCCCCCHHHHHHHHH------HHHHHHHHHHCCCCC
Q ss_conf             --------8778037------8885--------45555432001234420123456665------668999986236544
Q gi|254780546|r   94 --------PQTGLMA------AARE--------ARYALISEHAKTINATLIMTAHTFDD------QLETVYMRSQRDYAE  145 (423)
Q Consensus        94 --------~~~~~~~------~ar~--------~r~~~~~~~~~~~~~~~l~~ah~~dD------~~Et~l~rl~r~sg~  145 (423)
T Consensus        76 t~~~~~~~~~~~e~d~~~~~E~~p~tfVPgRN~~fl~~a~~yA~~~gA~~v~~G~~~~DfSgYPDCr~EFvka~n~~---  152 (227)
T TIGR00364        76 TDEQEIPEQKSNEEDKEKALETLPNTFVPGRNLIFLSLAASYAEALGAEAVITGVCETDFSGYPDCRDEFVKALNHA---  152 (227)
T ss_pred             CCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH---
T ss_conf             57875676666532023565311333378047999999999888618425220010003657988868899999999---


Q ss_pred             CCCCCCCCCCCCCCCCCCEEECCHHCCCHHHHHHHHHHHC
Q ss_conf             4332235764100357968710121042899999899818
Q gi|254780546|r  146 KGMGLSGMCDTILYDLNLWISRPFLRCRREDIRSFLLQRN  185 (423)
Q Consensus       146 ~g~~l~~~~~~~~~~~~~~i~RPLL~~~r~~l~~~~~~~~  185 (423)
T Consensus       153 --l~Lgn~~~~-v~i~Piql~aPL~~ltKaeiv~la~elG  189 (227)
T TIGR00364       153 --LNLGNMLTP-VEIRPIQLEAPLMDLTKAEIVKLADELG  189 (227)
T ss_pred             --HHHHCCCCC-CEEEEEEEECCEEECCHHHHHHHHHHHC
T ss_conf             --997412688-1120246666701269899999988735