HHsearch results for GI: 254780546 and protein with PDBid: 1kor_A
>1kor_A Argininosuccinate synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: ANP ARG; 1.95A {Thermus thermophilus} SCOP: c.26.2.1 d.210.1.1 PDB: 1j1z_A* 1j21_A* 1kh1_A 1kh2_A* 1kh3_A* 1j20_A*
Probab=98.62 E-value=4.1e-07 Score=67.77 Aligned_cols=140 Identities=18% Similarity=0.136 Sum_probs=89.2
Q ss_pred EEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCC-CEEEEEEECCC------
Q ss_conf 39999669424899999999999864899729999996677987846899999999987189-88999975047------
Q gi|254780546|r 21 HILVAVSGGSDSMGLLIALHSVLSDRSFGKIKFSAISVDHCLRETAKDEVRYVSDVCSRLRI-AHSVVSWKNSK------ 93 (423)
Q Consensus 21 ~i~vAvSGG~DS~aLl~ll~~~~~~~~~~~~~l~a~~vdHglr~~s~~e~~~v~~~~~~lgi-~~~~~~~~~~~------ 93 (423)
||++|+|||.|+++.+..|++-. +++|+++++|-|- + +|.+.+++.+.++|. +++++......
T Consensus 2 KVvLAySGGLDTSv~l~wL~e~~------~~eVi~~~~d~Gq-~---~d~~~i~~kA~~~GA~~~~v~D~r~ef~~~~i~ 71 (400)
T 1kor_A 2 KIVLAYSGGLDTSIILKWLKETY------RAEVIAFTADIGQ-G---EEVEEAREKALRTGASKAIALDLKEEFVRDFVF 71 (400)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHH------TCEEEEEEEESSC-S---SCHHHHHHHHHHHTCSEEEEEECHHHHHHHTHH
T ss_pred EEEEEECCCCHHHHHHHHHHHCC------CCEEEEEEEECCC-H---HHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHH
T ss_conf 69999489817999999997405------9889999970886-6---766999999998499889997579999999999
Q ss_pred -----------CCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHH--HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf -----------8778037888545555432001234420123456--665668999986236544433223576410035
Q gi|254780546|r 94 -----------PQTGLMAAAREARYALISEHAKTINATLIMTAHT--FDDQLETVYMRSQRDYAEKGMGLSGMCDTILYD 160 (423)
Q Consensus 94 -----------~~~~~~~~ar~~r~~~~~~~~~~~~~~~l~~ah~--~dD~~Et~l~rl~r~sg~~g~~l~~~~~~~~~~ 160 (423)
.-.-..+.+|-.-...+.+.+++.++..++-|-+ -+||+--.+- .+ .+ .
T Consensus 72 p~i~ana~Ye~~Y~l~tslaRplia~~~v~~A~~~ga~~iaHG~TGkGNDQvRFe~~--~~----------al------~ 133 (400)
T 1kor_A 72 PMMRAGAVYEGYYLLGTSIARPLIAKHLVRIAEEEGAEAIAHGATGKGNDQVRFELT--AY----------AL------K 133 (400)
T ss_dssp HHHHTTCCBTTTBCCTTTTHHHHHHHHHHHHHHHHTCSEEECCCCTTSSHHHHHHHH--HH----------HH------C
T ss_pred HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHH--HH----------HH------C
T ss_conf 999738655787623454106479999999985449769943777578723668889--99----------75------9
Q ss_pred CCCEEECCHH--CC-CHHHHHHHHHHHCCCC
Q ss_conf 7968710121--04-2899999899818932
Q gi|254780546|r 161 LNLWISRPFL--RC-RREDIRSFLLQRNISW 188 (423)
Q Consensus 161 ~~~~i~RPLL--~~-~r~~l~~~~~~~~i~w 188 (423)
-++.++-|.- .+ +|++..+||+++||+.
T Consensus 134 P~l~iiaPwRd~~~~sR~~~i~ya~~~gIpv 164 (400)
T 1kor_A 134 PDIKVIAPWREWSFQGRKEMIAYAEAHGIPV 164 (400)
T ss_dssp TTCEEECGGGTCCCCSHHHHHHHHHHTTCCC
T ss_pred CCCEEECCCHHCCCCCHHHHHHHHHHCCCCC
T ss_conf 9974850101025366799999999849998