HHsearch results for GI: 254780546 and protein with PDBid: 1vl2_A
>1vl2_A Argininosuccinate synthase; TM1780, structural genomics, JCSG, protein structure initiative, PSI, joint center for structural genomics; 1.65A {Thermotoga maritima} SCOP: c.26.2.1 d.210.1.1
Probab=98.85 E-value=1.9e-08 Score=77.23 Aligned_cols=141 Identities=18% Similarity=0.162 Sum_probs=96.4
Q ss_pred CCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCC-CCEEEEEEECCC----
Q ss_conf 983999966942489999999999986489972999999667798784689999999998718-988999975047----
Q gi|254780546|r 19 PAHILVAVSGGSDSMGLLIALHSVLSDRSFGKIKFSAISVDHCLRETAKDEVRYVSDVCSRLR-IAHSVVSWKNSK---- 93 (423)
Q Consensus 19 ~~~i~vAvSGG~DS~aLl~ll~~~~~~~~~~~~~l~a~~vdHglr~~s~~e~~~v~~~~~~lg-i~~~~~~~~~~~---- 93 (423)
..||++|+|||.||++.+.+|++ . +++|+++++|-|- + +|.+.+++.+.++| ++|+++......
T Consensus 14 k~KVvlAySGGLDTSv~l~~L~e----~---g~eVi~~~~d~Gq-~---ed~~~~~~kA~~~GA~~~~v~D~r~ef~~~~ 82 (421)
T 1vl2_A 14 KEKVVLAYSGGLDTSVILKWLCE----K---GFDVIAYVANVGQ-K---DDFVAIKEKALKTGASKVYVEDLRREFVTDY 82 (421)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHH----T---TCEEEEEEEESSC-C---CCHHHHHHHHHHHTCSEEEEEECHHHHHHHT
T ss_pred CCEEEEEECCCHHHHHHHHHHHH----C---CCEEEEEEEECCC-H---HHHHHHHHHHHHHCCCEEEEECHHHHHHHHH
T ss_conf 37099993887489999999987----7---9979999997997-6---7789999999984996899986099999999
Q ss_pred -------------CCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH--HHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf -------------87780378885455554320012344201234566--656689999862365444332235764100
Q gi|254780546|r 94 -------------PQTGLMAAAREARYALISEHAKTINATLIMTAHTF--DDQLETVYMRSQRDYAEKGMGLSGMCDTIL 158 (423)
Q Consensus 94 -------------~~~~~~~~ar~~r~~~~~~~~~~~~~~~l~~ah~~--dD~~Et~l~rl~r~sg~~g~~l~~~~~~~~ 158 (423)
.-....+.+|-.-...+.+.+++.++..++-|.+- +||+- +...- ..+.
T Consensus 83 i~p~I~ana~ye~~Y~l~tslaRplia~~~v~~A~~~ga~~iaHG~TGkGNDQvR-----Fe~~~-------~aL~---- 146 (421)
T 1vl2_A 83 IFTALLGNAMYEGRYLLGTAIARPLIAKRQVEIAEKEGAQYVAHGATGKGNDQVR-----FELTY-------AALN---- 146 (421)
T ss_dssp HHHHHTTTCCBTTTBCCHHHHHHHHHHHHHHHHHHHHTCSEEECCCCTTSSHHHH-----HHHHH-------HHHC----
T ss_pred HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCH-----HHHHH-------HHHC----
T ss_conf 9999966887678653421111589999999999970874883365247775410-----77779-------8728----
Q ss_pred CCCCCEEECCHHCC-------CHHHHHHHHHHHCCCC
Q ss_conf 35796871012104-------2899999899818932
Q gi|254780546|r 159 YDLNLWISRPFLRC-------RREDIRSFLLQRNISW 188 (423)
Q Consensus 159 ~~~~~~i~RPLL~~-------~r~~l~~~~~~~~i~w 188 (423)
.++.++-|.-.. +|++..+||+++||+.
T Consensus 147 --p~~~iiaP~R~~~~~~~~~~R~~~i~ya~~~gI~v 181 (421)
T 1vl2_A 147 --PNLKVISPWKDPEFLAKFKGRTDLINYAMEKGIPI 181 (421)
T ss_dssp --TTSEEECGGGCHHHHHHTC--CHHHHHHHHHTCCC
T ss_pred --CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCC
T ss_conf --97631585666656542011999999999759997