HHsearch results for GI: 254780546 and protein with PDBid: 1wxi_A
>1wxi_A NH(3)-dependent NAD(+) synthetase; NADE, E.coli, ligase; HET: AMP; 1.70A {Escherichia coli} SCOP: c.26.2.1 PDB: 1wxf_A 1wxg_A* 1wxh_A* 1wxe_A* 3hmq_A*
Probab=98.42 E-value=9.9e-06 Score=58.01 Aligned_cols=158 Identities=15% Similarity=0.132 Sum_probs=84.3
Q ss_pred CCHHHHHHHHHH----HC---CCCCEEEEEECCCHHHHHHHHHHHHHHHHC----CCCCEEEEEEEECCCCCCCHHHHHH
Q ss_conf 698999999998----52---799839999669424899999999999864----8997299999966779878468999
Q gi|254780546|r 3 LSPIESVRFFVR----SL---VYPAHILVAVSGGSDSMGLLIALHSVLSDR----SFGKIKFSAISVDHCLRETAKDEVR 71 (423)
Q Consensus 3 ~~p~~~~~~~~~----~l---~~~~~i~vAvSGG~DS~aLl~ll~~~~~~~----~~~~~~l~a~~vdHglr~~s~~e~~ 71 (423)
++|.+.+...+. .+ ..-.+|+|++|||.||++.+.|++...... ......+.++..-++... +.+++.
T Consensus 17 ~~~~~~i~~~v~~lrd~v~k~~~~k~vVlGLSGGVDSaV~A~L~~~Alg~~~v~~~~~~~~~~~v~mP~~~~~-~~~d~~ 95 (275)
T 1wxi_A 17 INAEEEIRRSVDFLKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRLETGNESLQFIAVRLPYGVQA-DEQDCQ 95 (275)
T ss_dssp CCHHHHHHHHHHHHHHHHHHSTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECCSSSCT-THHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC-CHHHHH
T ss_conf 9999999999999999999749988599978887889999999999999887631555531899978986764-258999
Q ss_pred HHHHHHHHCCCCEEEEEEECC-------------CC----CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 999999871898899997504-------------78----7780378885455554320012344201234566656689
Q gi|254780546|r 72 YVSDVCSRLRIAHSVVSWKNS-------------KP----QTGLMAAAREARYALISEHAKTINATLIMTAHTFDDQLET 134 (423)
Q Consensus 72 ~v~~~~~~lgi~~~~~~~~~~-------------~~----~~~~~~~ar~~r~~~~~~~~~~~~~~~l~~ah~~dD~~Et 134 (423)
...+..+++.+.+..++.. .. ..|+++ +.|-..+...+...+..++.|+|.- |.
T Consensus 96 --~a~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~N~~a---R~R~~~ly~~A~~~~~lVlgTgNks----E~ 166 (275)
T 1wxi_A 96 --DAIAFIQPDRVLTVNIKGAVLASEQALREAGIELSDFVRGNEKA---RERMKAQYSIAGMTSGVVVGTDHAA----EA 166 (275)
T ss_dssp --HHHHHHCCSEEEECCCHHHHHHHHHHHHHHTCCCCHHHHHHHHH---HHHHHHHHHHHHHTTEEEBCCCCHH----HH
T ss_pred --HHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHH---HHHHHHHHHHHHHCCCEEECCCCHH----HH
T ss_conf --99986307655315701789999987652067666320120257---8899999999844598787588487----77
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCHHCCCHHHHHHHHHHHCCC
Q ss_conf 99986236544433223576410035796871012104289999989981893
Q gi|254780546|r 135 VYMRSQRDYAEKGMGLSGMCDTILYDLNLWISRPFLRCRREDIRSFLLQRNIS 187 (423)
Q Consensus 135 ~l~rl~r~sg~~g~~l~~~~~~~~~~~~~~i~RPLL~~~r~~l~~~~~~~~i~ 187 (423)
..|-.. ..+.+..-+-||-++.|.|+++.++..|+|
T Consensus 167 -----~~Gy~T------------k~GD~~~di~Pl~~L~K~eVr~La~~lgiP 202 (275)
T 1wxi_A 167 -----ITGFFT------------KYGDGGTDINPLYRLNKRQGKQLLAALACP 202 (275)
T ss_dssp -----TTTCSC------------TTTTTCCSBCTTTTCCHHHHHHHHHHTTCC
T ss_pred -----HCCCCC------------CCCCCCCCHHHHHCCCHHHHHHHHHHCCCC
T ss_conf -----528713------------367765214557327789999999865999