HHsearch results for GI: 254780546 and protein with PDBid: 1wxi_A

>1wxi_A NH(3)-dependent NAD(+) synthetase; NADE, E.coli, ligase; HET: AMP; 1.70A {Escherichia coli} SCOP: c.26.2.1 PDB: 1wxf_A 1wxg_A* 1wxh_A* 1wxe_A* 3hmq_A*
Probab=98.42  E-value=9.9e-06  Score=58.01  Aligned_cols=158  Identities=15%  Similarity=0.132  Sum_probs=84.3

Q ss_pred             CCHHHHHHHHHH----HC---CCCCEEEEEECCCHHHHHHHHHHHHHHHHC----CCCCEEEEEEEECCCCCCCHHHHHH
Q ss_conf             698999999998----52---799839999669424899999999999864----8997299999966779878468999
Q gi|254780546|r    3 LSPIESVRFFVR----SL---VYPAHILVAVSGGSDSMGLLIALHSVLSDR----SFGKIKFSAISVDHCLRETAKDEVR   71 (423)
Q Consensus         3 ~~p~~~~~~~~~----~l---~~~~~i~vAvSGG~DS~aLl~ll~~~~~~~----~~~~~~l~a~~vdHglr~~s~~e~~   71 (423)
                      ++|.+.+...+.    .+   ..-.+|+|++|||.||++.+.|++......    ......+.++..-++... +.+++.
T Consensus        17 ~~~~~~i~~~v~~lrd~v~k~~~~k~vVlGLSGGVDSaV~A~L~~~Alg~~~v~~~~~~~~~~~v~mP~~~~~-~~~d~~   95 (275)
T 1wxi_A           17 INAEEEIRRSVDFLKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRLETGNESLQFIAVRLPYGVQA-DEQDCQ   95 (275)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHSTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECCSSSCT-THHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC-CHHHHH
T ss_conf             9999999999999999999749988599978887889999999999999887631555531899978986764-258999


Q ss_pred             HHHHHHHHCCCCEEEEEEECC-------------CC----CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             999999871898899997504-------------78----7780378885455554320012344201234566656689
Q gi|254780546|r   72 YVSDVCSRLRIAHSVVSWKNS-------------KP----QTGLMAAAREARYALISEHAKTINATLIMTAHTFDDQLET  134 (423)
Q Consensus        72 ~v~~~~~~lgi~~~~~~~~~~-------------~~----~~~~~~~ar~~r~~~~~~~~~~~~~~~l~~ah~~dD~~Et  134 (423)
                        ...+..+++.+.+..++..             ..    ..|+++   +.|-..+...+...+..++.|+|.-    |.
T Consensus        96 --~a~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~N~~a---R~R~~~ly~~A~~~~~lVlgTgNks----E~  166 (275)
T 1wxi_A           96 --DAIAFIQPDRVLTVNIKGAVLASEQALREAGIELSDFVRGNEKA---RERMKAQYSIAGMTSGVVVGTDHAA----EA  166 (275)
T ss_dssp             --HHHHHHCCSEEEECCCHHHHHHHHHHHHHHTCCCCHHHHHHHHH---HHHHHHHHHHHHHTTEEEBCCCCHH----HH
T ss_pred             --HHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHH---HHHHHHHHHHHHHCCCEEECCCCHH----HH
T ss_conf             --99986307655315701789999987652067666320120257---8899999999844598787588487----77


Q ss_pred             HHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCHHCCCHHHHHHHHHHHCCC
Q ss_conf             99986236544433223576410035796871012104289999989981893
Q gi|254780546|r  135 VYMRSQRDYAEKGMGLSGMCDTILYDLNLWISRPFLRCRREDIRSFLLQRNIS  187 (423)
Q Consensus       135 ~l~rl~r~sg~~g~~l~~~~~~~~~~~~~~i~RPLL~~~r~~l~~~~~~~~i~  187 (423)
                           ..|-..            ..+.+..-+-||-++.|.|+++.++..|+|
T Consensus       167 -----~~Gy~T------------k~GD~~~di~Pl~~L~K~eVr~La~~lgiP  202 (275)
T 1wxi_A          167 -----ITGFFT------------KYGDGGTDINPLYRLNKRQGKQLLAALACP  202 (275)
T ss_dssp             -----TTTCSC------------TTTTTCCSBCTTTTCCHHHHHHHHHHTTCC
T ss_pred             -----HCCCCC------------CCCCCCCCHHHHHCCCHHHHHHHHHHCCCC
T ss_conf             -----528713------------367765214557327789999999865999