HHsearch results for GI: 254780546 and protein with PDBid: 2gm3_A
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP, protein structure initiative; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=91.71 E-value=0.29 Score=26.42 Aligned_cols=104 Identities=10% Similarity=0.173 Sum_probs=56.8
Q ss_pred CCCCEEEEEECCCH---------HHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCC--------------------CC--
Q ss_conf 79983999966942---------489999999999986489972999999667798--------------------78--
Q gi|254780546|r 17 VYPAHILVAVSGGS---------DSMGLLIALHSVLSDRSFGKIKFSAISVDHCLR--------------------ET-- 65 (423)
Q Consensus 17 ~~~~~i~vAvSGG~---------DS~aLl~ll~~~~~~~~~~~~~l~a~~vdHglr--------------------~~-- 65 (423)
..|.||+|||-|.. =|...+..+.+...+.......|+++|+..--. .+
T Consensus 3 ~~~~~ilvavd~s~~~~~~~~~~~S~~Al~wAl~~~~~~~~~~~~l~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (175)
T 2gm3_A 3 SEPTKVMVAVNASTIKDYPNPSISCKRAFEWTLEKIVRSNTSDFKILLLHVQVVDEDGFDDVDSIYASPEDFRDMRQSNK 82 (175)
T ss_dssp --CEEEEEECCBCSSSCTTCBCHHHHHHHHHHHHHTTTTCTTSEEEEEEEEEC----------CCCCSHHHHHHHTTSHH
T ss_pred CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99887999973885756778888999999999999986699825999999446665333444544578889999999999
Q ss_pred --HHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
Q ss_conf --46899999999987189889999750478778037888545555432001234420123456665668
Q gi|254780546|r 66 --AKDEVRYVSDVCSRLRIAHSVVSWKNSKPQTGLMAAAREARYALISEHAKTINATLIMTAHTFDDQLE 133 (423)
Q Consensus 66 --s~~e~~~v~~~~~~lgi~~~~~~~~~~~~~~~~~~~ar~~r~~~~~~~~~~~~~~~l~~ah~~dD~~E 133 (423)
+.+-.+.+.+.|++.|+++.+....+ .+ ...+.+.+++.+++.++.|.|-....+
T Consensus 83 ~~~~~~l~~~~~~~~~~~v~~~~~~~~G-~~------------~~~I~~~a~~~~~dlIVmG~~g~~~~~ 139 (175)
T 2gm3_A 83 AKGLHLLEFFVNKCHEIGVGCEAWIKTG-DP------------KDVICQEVKRVRPDFLVVGSRGLGRFQ 139 (175)
T ss_dssp HHHHHHHHHHHHHHHHHTCEEEEEEEES-CH------------HHHHHHHHHHHCCSEEEEEECCCC---
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEEEC-CH------------HHHHHHHHHHCCCCEEEECCCCCCCCC
T ss_conf 9999999999999997498268898534-64------------277899999728988996289998666