HHsearch results for GI: 254780546 and protein with PDBid: 3n05_A
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=97.95 E-value=4.7e-05 Score=53.25 Aligned_cols=138 Identities=15% Similarity=0.140 Sum_probs=83.0
Q ss_pred CCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECC----
Q ss_conf 7998399996694248999999999998648997299999966779878468999999999871898899997504----
Q gi|254780546|r 17 VYPAHILVAVSGGSDSMGLLIALHSVLSDRSFGKIKFSAISVDHCLRETAKDEVRYVSDVCSRLRIAHSVVSWKNS---- 92 (423)
Q Consensus 17 ~~~~~i~vAvSGG~DS~aLl~ll~~~~~~~~~~~~~l~a~~vdHglr~~s~~e~~~v~~~~~~lgi~~~~~~~~~~---- 92 (423)
.+-.+++|++|||.||...+.++.+-.. ..++++++.-. ...|+......+++|+.+|+.+.++.++..
T Consensus 324 ~g~~~~v~glSGGiDSal~a~la~~alg-----~~~v~~~~mP~--~~ss~~t~~~a~~l~~~lg~~~~~~~i~~~~~~~ 396 (590)
T 3n05_A 324 NGFRSVLIGLSGGIDSALVAAIACDALG-----AQNVYGVSMPS--KYSSDHSKGDAAELARRTGLNFRTVSIEPMFDAY 396 (590)
T ss_dssp TTCCCEEEECCSSHHHHHHHHHHHHHHC-----GGGEEEEECCC--SSCCHHHHHHHHHHHHHHTCEEEECCSHHHHHHH
T ss_pred HCCCEEEEECCCCCCHHHHHHHHHHHCC-----CCCCEEEECCC--CCCCCCCHHHHHHHHHHCCCCCCCEECHHHHHHH
T ss_conf 1998699963799328999999998518-----86511354686--6674020999999999719973214317999999
Q ss_pred ----CC----CCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf ----78----7780378885455554320012344201234566656689999862365444332235764100357968
Q gi|254780546|r 93 ----KP----QTGLMAAAREARYALISEHAKTINATLIMTAHTFDDQLETVYMRSQRDYAEKGMGLSGMCDTILYDLNLW 164 (423)
Q Consensus 93 ----~~----~~~~~~~ar~~r~~~~~~~~~~~~~~~l~~ah~~dD~~Et~l~rl~r~sg~~g~~l~~~~~~~~~~~~~~ 164 (423)
.. ..|+|+ +.|...+...+...+...+-|+. .. |- +.|... ..+...-
T Consensus 397 ~~~~~~~~~~~eN~qa---r~R~~~l~~~a~~~~~lvl~t~n-~s---E~---------------alG~~t--~~gd~~~ 452 (590)
T 3n05_A 397 MASLGLTGLAEENLQS---RLRGTTLMAISNQEGHIVLAPGN-KS---EL---------------AVGYST--LYGDSVG 452 (590)
T ss_dssp HHHHCCCTHHHHHHHH---HHHHHHHHHHHHHHTCEEBCCCC-HH---HH---------------HHTCCC--SSCTTSC
T ss_pred HHHCCCCCHHHHHHHH---HHHHHHHHHHHHHCCCEEECCCC-HH---HH---------------HHCCCE--ECCCCCC
T ss_conf 8621334135677788---77489999987146937963786-74---67---------------637511--1367763
Q ss_pred EECCHHCCCHHHHHHHHHHHC
Q ss_conf 710121042899999899818
Q gi|254780546|r 165 ISRPFLRCRREDIRSFLLQRN 185 (423)
Q Consensus 165 i~RPLL~~~r~~l~~~~~~~~ 185 (423)
-+-|+-+++|.+++..++..+
T Consensus 453 ~~~p~~~l~Kt~v~~l~~~~~ 473 (590)
T 3n05_A 453 AYGPIKDVYKTSIFRLAEWRN 473 (590)
T ss_dssp SBCTTTTSCHHHHHHHHHHHH
T ss_pred CCEECCCCCHHHHHHHHHHHH
T ss_conf 200037853999999999985