HHsearch results for GI: 254780546 and protein with PDBid: 3p52_A
>3p52_A NH(3)-dependent NAD(+) synthetase; structural genomics, center for structural genomics of infec diseases, NADE, CSGI; 2.74A {Campylobacter jejuni}
Probab=99.14 E-value=5.5e-10 Score=88.09 Aligned_cols=160 Identities=16% Similarity=0.206 Sum_probs=104.2
Q ss_pred HHHHHHHHHC---CCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 9999999852---7998399996694248999999999998648997299999966779878468999999999871898
Q gi|254780546|r 7 ESVRFFVRSL---VYPAHILVAVSGGSDSMGLLIALHSVLSDRSFGKIKFSAISVDHCLRETAKDEVRYVSDVCSRLRIA 83 (423)
Q Consensus 7 ~~~~~~~~~l---~~~~~i~vAvSGG~DS~aLl~ll~~~~~~~~~~~~~l~a~~vdHglr~~s~~e~~~v~~~~~~lgi~ 83 (423)
+.+..|++.- .+..+++||+|||.||++++.++++... -++.+++++++..+ ..+.+.+.++|+.+||+
T Consensus 11 ~~i~~~i~~~~~~~g~~~vvlglSGGVDSsv~a~La~~al~------~~v~~v~~~~~~~~--~~~~~~a~~la~~lgi~ 82 (249)
T 3p52_A 11 EKMCDFIQEKVKNSQSQGVVLGLSGGIDSALVATLCKRALK------ENVFALLMPTQISN--KANLEDALRLCADLNLE 82 (249)
T ss_dssp HHHHHHHHHHHHTSSCSEEEEECCSSHHHHHHHHHHHHHHT------TSEEEEECCSCCSS--CHHHHHHHHHHHHHTCE
T ss_pred HHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHCC------CCEEEEECCCCCCC--HHHHHHHHHHHHHHCCC
T ss_conf 99999999999992998299978898899999999998448------71799857841100--06899999999981776
Q ss_pred EEEEEEECC-------CCCC---CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 899997504-------7877---803788854555543200123442012345666566899998623654443322357
Q gi|254780546|r 84 HSVVSWKNS-------KPQT---GLMAAAREARYALISEHAKTINATLIMTAHTFDDQLETVYMRSQRDYAEKGMGLSGM 153 (423)
Q Consensus 84 ~~~~~~~~~-------~~~~---~~~~~ar~~r~~~~~~~~~~~~~~~l~~ah~~dD~~Et~l~rl~r~sg~~g~~l~~~ 153 (423)
+.++..+.. .... ..+....+.|...+...+...+...+.|++ .++.. . |...
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~n~~ar~r~~~l~~~a~~~~~~v~~t~n-kse~~------~--G~~t-------- 145 (249)
T 3p52_A 83 YKIIEIQSILDAFIKQSENTTLVSLGNFAARIRMSLLYDYSALKNSLVIGTSN-KSELL------L--GYGT-------- 145 (249)
T ss_dssp EEECCCHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHHHTTEEEBCCCC-HHHHH------H--TCSC--------
T ss_pred CCEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCC-HHHHH------C--CCHH--------
T ss_conf 00000146888875100100046788999988789998766352855767885-55452------5--7322--------
Q ss_pred CCCCCCCCCCEEECCHHCCCHHHHHHHHHHHCCC--CCCCCCCC
Q ss_conf 6410035796871012104289999989981893--20266786
Q gi|254780546|r 154 CDTILYDLNLWISRPFLRCRREDIRSFLLQRNIS--WCEDPSNT 195 (423)
Q Consensus 154 ~~~~~~~~~~~i~RPLL~~~r~~l~~~~~~~~i~--wveDpSN~ 195 (423)
. ...+...+-|+-++.|.|+++.++..|++ +++-|.-.
T Consensus 146 --k--~gd~~~~~~Pl~~L~K~eVr~La~~lg~p~~ii~k~psa 185 (249)
T 3p52_A 146 --I--YGDLACAFNPIGSLYKSEIYALAKYLNLHENFIKKAPSA 185 (249)
T ss_dssp --T--TTTTCCSEETTTTSCHHHHHHHHHHTTCCHHHHHC----
T ss_pred --H--HHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHCCCCCCC
T ss_conf --3--531565200157978999999999969819870799996