HHSEARCH alignment of GI: 254780546 and SCOP domain: d1xnga1

Alignment
>d1xnga1 c.26.2.1 (A:3-257) NH3-dependent NAD+-synthetase {Helicobacter pylori [TaxId: 210]}
Probab=99.09  E-value=1.3e-09  Score=83.90  Aligned_cols=163  Identities=13%  Similarity=0.136  Sum_probs=98.1

Q ss_pred             HHHHHHHHHC---CCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf             9999999852---7998399996694248999999999998648997299999966779878468999999999871898
Q gi|254780546|r    7 ESVRFFVRSL---VYPAHILVAVSGGSDSMGLLIALHSVLSDRSFGKIKFSAISVDHCLRETAKDEVRYVSDVCSRLRIA   83 (423)
Q Consensus         7 ~~~~~~~~~l---~~~~~i~vAvSGG~DS~aLl~ll~~~~~~~~~~~~~l~a~~vdHglr~~s~~e~~~v~~~~~~lgi~   83 (423)
                      +.+..|++.-   .+..+|+||+|||+||++.+.++++....      ++++++++++..  +.++...+..+|+.+||+
T Consensus         8 ~~l~~~l~~~~~~~G~k~vvvglSGGVDSsv~A~L~~~a~~~------~v~~v~mp~~~~--~~~~~~~A~~la~~lgi~   79 (255)
T d1xnga1           8 VYLCDFLEKEVQKRGFKKVVYGLSGGLDSAVVGVLCQKVFKE------NAHALLMPSSVS--MPENKTDALNLCEKFSIP   79 (255)
T ss_dssp             HHHHHHHHHHHHHTTCCCEEEECCSSHHHHHHHHHHHHHHGG------GEEEEECCCSSS--CHHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHH------HCCHHCCCCHHC--CHHHHHHHHHHHHHHHHC
T ss_conf             999999999999829982999787988999999999997565------121112751214--525589999999985400


Q ss_pred             EEEEEEECCC-------CCCC---CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             8999975047-------8778---03788854555543200123442012345666566899998623654443322357
Q gi|254780546|r   84 HSVVSWKNSK-------PQTG---LMAAAREARYALISEHAKTINATLIMTAHTFDDQLETVYMRSQRDYAEKGMGLSGM  153 (423)
Q Consensus        84 ~~~~~~~~~~-------~~~~---~~~~ar~~r~~~~~~~~~~~~~~~l~~ah~~dD~~Et~l~rl~r~sg~~g~~l~~~  153 (423)
                      +.....+...       ....   ......+.|-..+...+...+...+.|++.    .|+.+     |-+..       
T Consensus        80 ~~~i~~~~~~~~~~~~~~~~~~~~~~n~~ar~r~~~l~~~a~~~~~~v~gt~n~----~e~~~-----g~~t~-------  143 (255)
T d1xnga1          80 YTEYSIAPYDAIFSSHFKDASLTRKGNFCARLRMAFLYDYSLKSDSLVIGTSNK----SERML-----GYGTL-------  143 (255)
T ss_dssp             EEECCCHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHHTCEEBCCCCH----HHHHH-----TCSCT-------
T ss_pred             CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH----HHHHC-----CCCCH-------
T ss_conf             123556777766542122112456788899982888998876408756787318----87860-----64400-------


Q ss_pred             CCCCCCCCCCEEECCHHCCCHHHHHHHHHHHCCC--CCCCCCCCCCC
Q ss_conf             6410035796871012104289999989981893--20266786422
Q gi|254780546|r  154 CDTILYDLNLWISRPFLRCRREDIRSFLLQRNIS--WCEDPSNTDDR  198 (423)
Q Consensus       154 ~~~~~~~~~~~i~RPLL~~~r~~l~~~~~~~~i~--wveDpSN~d~~  198 (423)
                           .......+=||-+++|.|+++.++..|+|  .++-|...+..
T Consensus       144 -----~gd~~~~l~Pl~dL~K~eVr~LA~~lglP~~i~~k~ps~~L~  185 (255)
T d1xnga1         144 -----FGDLACAINPIGELFKTEVYELARRLNIPKKILNKPPSADLF  185 (255)
T ss_dssp             -----TTTTCCSEETTTTSCHHHHHHHHHHTTCCHHHHTSCCCCCSS
T ss_pred             -----HHHHCCCHHHHCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCC
T ss_conf             -----434213101312769999999999829956653189995302


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: N-type ATP pyrophosphatases
domain: NH3-dependent NAD+-synthetase
species: Helicobacter pylori [TaxId: 210]