HHSEARCH alignment of GI: 254780546 and SCOP domain: d2c5sa1

Alignment
>d2c5sa1 c.26.2.6 (A:174-391) Thiamine biosynthesis protein ThiI, C-terminal domain {Bacillus anthracis [TaxId: 1392]}
Probab=99.88  E-value=3.1e-23  Score=180.10  Aligned_cols=169  Identities=15%  Similarity=0.059  Sum_probs=133.4

Q ss_pred             CCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECC-----
Q ss_conf             998399996694248999999999998648997299999966779878468999999999871898899997504-----
Q gi|254780546|r   18 YPAHILVAVSGGSDSMGLLIALHSVLSDRSFGKIKFSAISVDHCLRETAKDEVRYVSDVCSRLRIAHSVVSWKNS-----   92 (423)
Q Consensus        18 ~~~~i~vAvSGG~DS~aLl~ll~~~~~~~~~~~~~l~a~~vdHglr~~s~~e~~~v~~~~~~lgi~~~~~~~~~~-----   92 (423)
                      ...|++||+|||+|||+|+++++.    .   +++++++|+|||.+. +..+...+.++|..++++.........     
T Consensus         3 ~~gKvvv~~SGG~DS~vla~ll~k----~---g~~v~av~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~   74 (218)
T d2c5sa1           3 VGGKVMVLLSGGIDSPVAAYLTMK----R---GVSVEAVHFHSPPFT-SERAKQKVIDLAQELTKYCKRVTLHLVPFTEV   74 (218)
T ss_dssp             TTEEEEEECCSSSHHHHHHHHHHH----B---TEEEEEEEEECTTTS-CHHHHHHHHHHHHHHGGGSSCEEEEEEECHHH
T ss_pred             CCCEEEEEECCCHHHHHHHHHHHH----C---CCEEEEEEEECCCCC-CHHHHHHHHHHHCCCCCCCCCCCEEEEECCHH
T ss_conf             788799995494899999999998----4---991899998679866-36777777765100001245552478631203


Q ss_pred             -------CCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf             -------7877803788854555543200123442012345666566899998623654443322357641003579687
Q gi|254780546|r   93 -------KPQTGLMAAAREARYALISEHAKTINATLIMTAHTFDDQLETVYMRSQRDYAEKGMGLSGMCDTILYDLNLWI  165 (423)
Q Consensus        93 -------~~~~~~~~~ar~~r~~~~~~~~~~~~~~~l~~ah~~dD~~Et~l~rl~r~sg~~g~~l~~~~~~~~~~~~~~i  165 (423)
                             .+....+..++..+|..+...+.+.++..++||||++|+.|+.++++...+..               .++.+
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~i~~G~~~~d~~~~~~~~l~~~~~~---------------~~~~i  139 (218)
T d2c5sa1          75 QKTINKEIPSSYSMTVMRRMMMRITERIAEERNALAITTGESLGQVASQTLDSMHTINEV---------------TNYPV  139 (218)
T ss_dssp             HHHHHHHSCGGGHHHHHHHHHHHHHHHHHHHTTCCEEECCCCSSSTTSCCHHHHHHHGGG---------------CCSCE
T ss_pred             HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCCHH---------------CHHHH
T ss_conf             333231245423888998999999999999712542783124375244557877301000---------------00267


Q ss_pred             ECCHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             10121042899999899818932026678642210189997643
Q gi|254780546|r  166 SRPFLRCRREDIRSFLLQRNISWCEDPSNTDDRFERVRVRRFVR  209 (423)
Q Consensus       166 ~RPLL~~~r~~l~~~~~~~~i~wveDpSN~d~~f~R~rlR~~l~  209 (423)
                      +|||+.++|+||++|++++|++|+.+++|.+..+.++..|....
T Consensus       140 irPll~~~K~eI~~~a~~~gi~~~~~~~~~~~~~~~~~~~~~~~  183 (218)
T d2c5sa1         140 IRPLITMDKLEIIKIAEEIGTYDISIRPYEDCCTVFTPASPATK  183 (218)
T ss_dssp             ECTTTTCCHHHHHHHHHHTTCHHHHTSCC--------------C
T ss_pred             HHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf             77653178999999999859966110687555540377887236


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: ThiI-like
domain: Thiamine biosynthesis protein ThiI, C-terminal domain
species: Bacillus anthracis [TaxId: 1392]