HHSEARCH alignment of GI: 254780546 and SCOP domain: d2d13a1

Alignment
>d2d13a1 c.26.2.1 (A:2-227) Hypothetical protein PH1257 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=97.89  E-value=7.3e-05  Score=50.19  Aligned_cols=147  Identities=13%  Similarity=0.023  Sum_probs=76.0

Q ss_pred             CCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEE-EEE-CCCCCCCH--HHHHHHHHHHHHHCCCCEEEEEEECCC
Q ss_conf             99839999669424899999999999864899729999-996-67798784--689999999998718988999975047
Q gi|254780546|r   18 YPAHILVAVSGGSDSMGLLIALHSVLSDRSFGKIKFSA-ISV-DHCLRETA--KDEVRYVSDVCSRLRIAHSVVSWKNSK   93 (423)
Q Consensus        18 ~~~~i~vAvSGG~DS~aLl~ll~~~~~~~~~~~~~l~a-~~v-dHglr~~s--~~e~~~v~~~~~~lgi~~~~~~~~~~~   93 (423)
                      ...+|+|-+|||+||+--++.+.+    .+   +++.+ +|+ ...-..-.  .-..+.++..++.+|||+.........
T Consensus         2 ~~~~V~vl~SGGKDS~lAl~~a~~----~G---~eV~~L~t~~~~~~~s~~~h~~~~~ll~~qAealgiPl~~~~~~~~~   74 (226)
T d2d13a1           2 GLADVAVLYSGGKDSNYALYWALK----SG---LRVRYLVSMVSENEESYMYHTPNVELTSLQARALGIPIIKGFTKGEK   74 (226)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHH----TT---CEEEEEEEEECCC---------CCTTHHHHHHHHTCCEEEEEC--CT
T ss_pred             CCEEEEEEECCCHHHHHHHHHHHH----CC---CEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCC
T ss_conf             722199992686999999999998----59---90599999843789967165788999999998638982687347861


Q ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCHHCCC
Q ss_conf             87780378885455554320012344201234566656689999862365444332235764100357968710121042
Q gi|254780546|r   94 PQTGLMAAAREARYALISEHAKTINATLIMTAHTFDDQLETVYMRSQRDYAEKGMGLSGMCDTILYDLNLWISRPFLRCR  173 (423)
Q Consensus        94 ~~~~~~~~ar~~r~~~~~~~~~~~~~~~l~~ah~~dD~~Et~l~rl~r~sg~~g~~l~~~~~~~~~~~~~~i~RPLL~~~  173 (423)
                           +.     ....+....++.+...+.+|.-..+...+-.-+.+...                  ++..+-||-...
T Consensus        75 -----e~-----~~~~l~~~l~~~~v~~vv~Gdi~~~~~r~r~e~~c~~~------------------gl~~~~PLW~~d  126 (226)
T d2d13a1          75 -----EK-----EVEDLKNVLEGLKVDGIVAGALASRYQKERIENVAREL------------------GLKVYTPAWEKD  126 (226)
T ss_dssp             -----TS-----HHHHHHHHHHTBCCSEEECCCSSCHHHHHHHHHHHHHH------------------TCEEECTTTTCC
T ss_pred             -----HH-----HHHHHHHHHHHCCCCCEEECCEECHHHHHHHHHHHHHC------------------CCEEEECCCCCC
T ss_conf             -----29-----99999999986072536761000388899998668765------------------948982356889


Q ss_pred             HHHHHHHHHHHCCCCCC---CCCCCCCCC
Q ss_conf             89999989981893202---667864221
Q gi|254780546|r  174 REDIRSFLLQRNISWCE---DPSNTDDRF  199 (423)
Q Consensus       174 r~~l~~~~~~~~i~wve---DpSN~d~~f  199 (423)
                      .+++..-.-+.|+..+-   |+...++.|
T Consensus       127 ~~~ll~e~i~~G~~aii~~v~~~gL~~~~  155 (226)
T d2d13a1         127 PYQYMLEIIKLGFKVVFVAVSAYGLNESW  155 (226)
T ss_dssp             HHHHHHHHHHTTCEEEEEEECSTTCCGGG
T ss_pred             HHHHHHHHHHCCCCEEEEEECCCCCCHHH
T ss_conf             89999999987995999997247899789


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Adenine nucleotide alpha hydrolase-like
superfamily: Adenine nucleotide alpha hydrolases-like
family: N-type ATP pyrophosphatases
domain: Hypothetical protein PH1257
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]