BLAST/PSIBLAST alignment of GI: 254780546 and GI: 332716440 at iteration 1
>gi|332716440|ref|YP_004443906.1| tRNA-lysidine synthase [Agrobacterium sp. H13-3] Length = 445
>gi|325063125|gb|ADY66815.1| tRNA-lysidine synthase [Agrobacterium sp. H13-3] Length = 445
 Score =  287 bits (734), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 162/440 (36%), Positives = 248/440 (56%), Gaps = 29/440 (6%)

Query: 3   LSPIESVRFFVRSLVYPAHILVAVSGGSDSMGLLIALHSVLSDRSFGKIKFSAISVDHCL 62
           ++P+ + R FV +L  P HIL+A+SGGSDS GLL+A H   ++    +++ SA++VDH L
Sbjct: 13  VAPLAAARSFVENLRKPVHILIAISGGSDSTGLLLATHEARAEAGSDRVQLSAVTVDHAL 72

Query: 63  RETAKDEVRYVSDVCSRLRIAHSVVSWKNSKPQTGLMAAAREARYALISEHAKTINATLI 122
           R  + DE   VS +C+ L I H+V  W + KP +G+  A+R ARY+LI+  A  I A L+
Sbjct: 73  RAESADEAHKVSLLCAELGIPHTVRRWDDPKPASGISEASRLARYSLIAGVASDIGADLV 132

Query: 123 MTAHTFDDQLETVYMRSQRDYAEKGMGLSGMCDTILYDLNLWISRPFLRCRREDIRSFLL 182
           MT HT  DQ ETV MR+ R  + + +GL+GM D +LY    WI RPFL C R++IR F+L
Sbjct: 133 MTGHTLGDQRETVAMRAARSGSSENLGLAGMADAVLYGGRHWIMRPFLTCERQEIRDFVL 192

Query: 183 QRNISWCEDPSNTDDRFERVRVRRFVRD----IDLHALYLKMKKFQDLRVKVNNAVAMLI 238
            R+  W +DPSN + R+ERVRVR+ +       D  A  +K + + +         A  +
Sbjct: 193 SRSRGWFDDPSNDNARYERVRVRQSLSGSPPPFDAQA-AVKRQAYSE-------KTAFFL 244

Query: 239 PKYLTVHMRSIIAISQDILNIDSTLLFYLLRVSAAICGGQISLPGYRSMERVMLFLKSGK 298
            + + V   ++  +S + L  D     + L V  A  GG+   P   SM+RV+ FLK+G+
Sbjct: 245 QQNVEVFHATLARLSDEGLMPDLPEFRHGLAVLIANLGGRAYFPAASSMDRVLQFLKTGE 304

Query: 299 RGCVSIGRVVIDRRANFLWITRAVRNLPTLILYPEETTVWDGRYQFQNLSDSLIQIGPQS 358
            G +++GRV++DRR + L++ R  RN+P L +      +WD R+  +N S   + I    
Sbjct: 305 NGRITVGRVLLDRRKDGLYLFREHRNMPELQVEAGGQGLWDDRFLVKNTSAFPVNIAAGR 364

Query: 359 ----YRKADVPSGIPPIIAQRALSSMP----------SKEGG---KPLLAPFSRFMTKFD 401
                  A +   +PP IA++A++ +P          S EG     P LAPF  F+ +FD
Sbjct: 365 TGGIVDAAALFPAVPPGIAKQAMAILPQIATLVPPRASPEGAISIVPRLAPFDLFLPRFD 424

Query: 402 LPVAYAFSISFGKVFIPRLP 421
           L +A A ++ FG+   P+ P
Sbjct: 425 LELANAIAVLFGRAAYPQPP 444