HHsearch alignment of GI: 254780547 and MMDB domain: 1r1m_A_
>1r1m_A (A:) Outer membrane protein class 4; 1.90A {Neisseria meningitidis}
Probab=99.95 E-value=3.5e-29 Score=189.13 Aligned_cols=110 Identities=27% Similarity=0.338 Sum_probs=103.3
Q ss_pred HHHCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCE-EEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 52031002204752243247999999984302560-58999972266533332001113379999999985289860699
Q gi|254780547|r 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK 124 (160)
Q Consensus 46 ~~~~~~v~F~~~s~~L~~~~~~~L~~ia~~l~~~~-~~i~I~GhtD~~Gs~~yN~~LS~~RA~aV~~~L~~~Gi~~~ri~ 124 (160)
+.+...+||++||+.|+++++..|+.++.+|+.++ .+|.|.||||..|+..||+.||++||.+|++||+..|++++||.
T Consensus 11 i~l~~~i~F~~~s~~l~~~~~~~L~~ia~~l~~~p~~~i~I~Ghtd~~g~~~~N~~LS~~RA~aV~~~L~~~gi~~~ri~ 90 (164)
T 1r1m_A 11 ISLSAKTLFGFDKDSLRAEAQDNLKVLAQRLSRTNIQSVRVEGHTDFMGSDKYNQALSERRAYVVANNLVSNGVPVSRIS 90 (164)
T ss_dssp EEEEHHHHHTTSSSCCCHHHHHHHHHHHHHHTTSCEEEEEEEEECCSSSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEE
T ss_pred EEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHEE
T ss_conf 99777335518972269899999999999997789818999997389898557079999999999999998599989989
Q ss_pred EEEECCCCCCCCCCCHHHHHCCCEEEEEEEE
Q ss_conf 9970744898998787798429918999971
Q gi|254780547|r 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155 (160)
Q Consensus 125 ~~g~G~~~P~~~~~~~~~~~~NRRVei~i~~ 155 (160)
+.|||+++|++++.+++++++||||||++..
T Consensus 91 ~~g~G~~~P~~~~~~~~~~~~NRRVei~~~~ 121 (164)
T 1r1m_A 91 AVGLGESQAQMTQVCEAEVAKLGAKVSKAKK 121 (164)
T ss_dssp EEECTTTTCCCHHHHHHHHHTCCSSCCSSHH
T ss_pred EEEECCCCCCCCCCCHHHHHHCCCCCHHHCC
T ss_conf 9987676888989797898531441000000