HHsearch alignment of GI: 254780547 and MMDB domain: 2zov_A_

>2zov_A (A:) Chemotaxis protein MOTB; 2-layer sandwich, bacterial flagellum, cell projection, flagellar rotation, inner membrane, membrane; 2.00A {Salmonella typhimurium}
Probab=99.95  E-value=8.2e-29  Score=186.97  Aligned_cols=106  Identities=20%  Similarity=0.187  Sum_probs=97.8

Q ss_pred             HCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCC-----CCCCCCCHHHHHHHHHHHHHHHH-CCCCCE
Q ss_conf             031002204752243247999999984302560589999722665-----33332001113379999999985-289860
Q gi|254780547|r   48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL-----GSRNSSIALGLRRAYAVFNYFVA-RGISAS  121 (160)
Q Consensus        48 ~~~~v~F~~~s~~L~~~~~~~L~~ia~~l~~~~~~i~I~GhtD~~-----Gs~~yN~~LS~~RA~aV~~~L~~-~Gi~~~  121 (160)
                      +...++|++||+.|++++...|+.++.+|+.++.+|.|+||||+.     |+..|||.||++||++|++||+. .||+++
T Consensus        69 ~~~~i~F~~~sa~l~~~~~~~l~~ia~~l~~~~~~i~I~GhtD~~~~~~~G~~~~N~~LS~~RA~aV~~~L~~~~gi~~~  148 (210)
T 2zov_A           69 SQNRPXFKTGSAEVEPYXRDILRAIAPVLNGIPNRISLAGHTDDFPYANGEKGYSNWELSADRANASRRELVAGGLDNGK  148 (210)
T ss_dssp             CSSSCSBCTTSCCBCHHHHHHHHHHHHHHTTSCCCEEEEEEEECSCCCSSCSSCCHHHHHHHHHHHHHHHHHHTTCCTTC
T ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             89984869997446987999999999999833866999985487764457764205789999999999999985998035


Q ss_pred             EEEEEEECCCCCCCCCCCHHHHHCCCEEEEEEEE
Q ss_conf             6999970744898998787798429918999971
Q gi|254780547|r  122 RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG  155 (160)
Q Consensus       122 ri~~~g~G~~~P~~~~~~~~~~~~NRRVei~i~~  155 (160)
                      ||.+.|||+++|++++.  .++++||||||+|-.
T Consensus       149 ri~~~g~G~~~p~~~n~--~~~~~NRRVeI~i~~  180 (210)
T 2zov_A          149 VLRVVGXAATXRLSDRG--PDDAINRRISLLVLN  180 (210)
T ss_dssp             EEEEEEECCC-----------CCCEEEEEEEEEC
T ss_pred             EEEEEEECCCCCCCCCC--CCHHHCCCEEEEEEC
T ss_conf             89999868887899899--645872988999978