HHsearch alignment of GI: 254780547 and MMDB domain: 2zvy_A_

>2zvy_A (A:) Chemotaxis protein MOTB; 2-layer sandwich, bacterial flagellum, cell inner membrane, cell membrane, flagellar rotation, membrane; 1.75A {Salmonella typhimurium} PDB: 2zvz_A
Probab=99.95  E-value=1.6e-27  Score=179.46  Aligned_cols=106  Identities=21%  Similarity=0.195  Sum_probs=98.4

Q ss_pred             HCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCC-----CCCCCCCHHHHHHHHHHHHHHHH-CCCCCE
Q ss_conf             031002204752243247999999984302560589999722665-----33332001113379999999985-289860
Q gi|254780547|r   48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL-----GSRNSSIALGLRRAYAVFNYFVA-RGISAS  121 (160)
Q Consensus        48 ~~~~v~F~~~s~~L~~~~~~~L~~ia~~l~~~~~~i~I~GhtD~~-----Gs~~yN~~LS~~RA~aV~~~L~~-~Gi~~~  121 (160)
                      ....++|++||+.|+++++..|+.++.+|+.++.+|.|+||||+.     |+..|||.||++||++|++||++ .|++++
T Consensus        58 ~~~~i~F~~~sa~l~~~~~~~l~~la~~l~~~~~~i~I~Ghtd~~~~~~~g~~~~N~~LS~~RA~aV~~~L~~~~gi~~~  137 (183)
T 2zvy_A           58 SQNRPMFKTGSAEVEPYMRDILRAIAPVLNGIPNRISLAGHTDDFPYANGEKGYSNWELSADRANASRRELVAGGLDNGK  137 (183)
T ss_dssp             CSSSCSBCTTCCSBCHHHHHHHHHHHHHHTTSCCCEEEEEECCSSCTTCSTTSSCHHHHHHHHHHHHHHHHHHTTCCTTC
T ss_pred             CCCCCCCCCCCCEECHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             78886868998405816779999999999714760899972366675557753116899999999999999870589878


Q ss_pred             EEEEEEECCCCCCCCCCCHHHHHCCCEEEEEEEE
Q ss_conf             6999970744898998787798429918999971
Q gi|254780547|r  122 RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG  155 (160)
Q Consensus       122 ri~~~g~G~~~P~~~~~~~~~~~~NRRVei~i~~  155 (160)
                      +|.+.|||+.+|+.++.+  ++++||||||.|..
T Consensus       138 ri~~~g~G~~~p~~~n~~--~~~~NRRVei~i~~  169 (183)
T 2zvy_A          138 VLRVVGMAATMRLSDRGP--DDAINRRISLLVLN  169 (183)
T ss_dssp             EEEEEECTTTTCSSCSST--TGGGGSEEEEEEEC
T ss_pred             EEEEEEECCCCCCCCCCC--CHHHHCCEEEEEEC
T ss_conf             899999677877898996--33770998999989