HHsearch alignment of GI: 254780547 and MMDB domain: 3cyp_B_
>3cyp_B (B:) Chemotaxis protein MOTB; bacterial flagellar motor, peptidoglycan binding, bacterial flagellum, flagellar rotation, inner membrane, membrane; 1.60A {Helicobacter pylori} PDB: 3cyq_B*
Probab=99.95 E-value=4.9e-28 Score=182.49 Aligned_cols=107 Identities=20% Similarity=0.357 Sum_probs=100.6
Q ss_pred CEEEEECCCCC-CCHHHHHHHHHHHHHHCCCE--EEEEEEEECCCC----CCCCCCCHHHHHHHHHHHHHHHHCCCCCEE
Q ss_conf 10022047522-43247999999984302560--589999722665----333320011133799999999852898606
Q gi|254780547|r 50 DSVFFDTSSYS-IRPADIQVLSNLGSWLEKHD--CDFLIEGHADEL----GSRNSSIALGLRRAYAVFNYFVARGISASR 122 (160)
Q Consensus 50 ~~v~F~~~s~~-L~~~~~~~L~~ia~~l~~~~--~~i~I~GhtD~~----Gs~~yN~~LS~~RA~aV~~~L~~~Gi~~~r 122 (160)
+.|||++||++ |++++++.|+.++.+|+.++ .+|.|+||||+. |+.+|||.||.+||++|+.||+.+||++++
T Consensus 3 ~~v~F~~~ss~~l~~~~~~~l~~ia~~l~~~~~~~~I~I~GhtD~~~~~~g~~~~N~~LS~~RA~~V~~~l~~~gi~~~r 82 (138)
T 3cyp_B 3 DPFTFENATSDAINQDMMLYIERIAKIIQKLPKRVHINVRGFTDDTPLVKTRFKSHYELAANRAYRVMKVLIQYGVNPNQ 82 (138)
T ss_dssp CCEECSSTTCCCCCHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCCCC----CCSHHHHHHHHHHHHHHHHHHTTCCGGG
T ss_pred CCEECCCCCHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCE
T ss_conf 86663899624339989999999999999689970899998608988777870779999999999999999985999565
Q ss_pred EEEEEECCCCCCCCCCCHHHHHCCCEEEEEEEEC
Q ss_conf 9999707448989987877984299189999713
Q gi|254780547|r 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156 (160)
Q Consensus 123 i~~~g~G~~~P~~~~~~~~~~~~NRRVei~i~~~ 156 (160)
|.+.|||+.+|++++++++++++||||||+|..-
T Consensus 83 i~~~g~G~~~p~~~~~~~~~~~~NRRVei~i~~~ 116 (138)
T 3cyp_B 83 LSFSSYGSTNPIAPNDSLENRMKNNRVEIFFSTD 116 (138)
T ss_dssp EEEEECTTCSCSSCTTSHHHHHHHSEEEEEEEEE
T ss_pred EEEEEECCCCCCCCCCCHHHHHHCCCEEEEEECC
T ss_conf 9999845567679993978997249689999708