HHsearch results for GI: 254780547 and protein with PDBid: 3khn_A
>3khn_A MOTB protein, putative; structural genomics, OMPA-like domain, PSI-2, protein structure initiative; 2.03A {Desulfovibrio vulgaris str}
Probab=99.96 E-value=1.3e-29 Score=190.76 Aligned_cols=109 Identities=23% Similarity=0.403 Sum_probs=99.7
Q ss_pred HHHCCEEEEECCCCCCCHHHHHHHHHHHHHHCCC-EEEEEEEEECCCCCC-----CCCCCHHHHHHHHHHHHHHHHCCCC
Q ss_conf 5203100220475224324799999998430256-058999972266533-----3320011133799999999852898
Q gi|254780547|r 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGS-----RNSSIALGLRRAYAVFNYFVARGIS 119 (160)
Q Consensus 46 ~~~~~~v~F~~~s~~L~~~~~~~L~~ia~~l~~~-~~~i~I~GhtD~~Gs-----~~yN~~LS~~RA~aV~~~L~~~Gi~ 119 (160)
+.+++.|+|++||+.|+++++..|+.++..|+.+ +..|.|+||||+.|+ ..+||.||.+||.+|++||++.|++
T Consensus 47 i~l~~~v~F~~gs~~L~~~~~~~L~~la~~l~~~~~~~i~I~GHTD~~~~~~~~~~~~N~~LS~~RA~aV~~~L~~~gi~ 126 (174)
T 3khn_A 47 LRVPSEVLFAPGAVELAPGADRVLATLKDLFIRRREQNINIKGFTDDVQPSANARFKDNWEVSALRSVNVLRYFLGAGIE 126 (174)
T ss_dssp EEEEHHHHBCTTCCSBCTTHHHHHHHHHHHHHHTTTCEEEEEEECCSCCCCTTSSCSSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred EEECCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99358840079975349769999999999997789958999998178775556672104789999999999999984999
Q ss_pred CEEEEEEEECCCCCCCCCCCHHHHHCCCEEEEEEE
Q ss_conf 60699997074489899878779842991899997
Q gi|254780547|r 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154 (160)
Q Consensus 120 ~~ri~~~g~G~~~P~~~~~~~~~~~~NRRVei~i~ 154 (160)
++||.+.|||+.+|++++++++++++||||||+|.
T Consensus 127 ~~ri~~~g~G~~~P~~~n~~~~~~~~NRRVei~i~ 161 (174)
T 3khn_A 127 PARLTATGLGELDPLFPNTSDENRARNRRVEFVLE 161 (174)
T ss_dssp GGGEEEEEEETSSCSSCSSSHHHHHHHSEEEEEEE
T ss_pred HHEEEEEEEECCCCCCCCCCHHHHHHCCCEEEEEE
T ss_conf 53399999825677899929789987497899998