BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780547|ref|YP_003064960.1| OmpA/MotB [Candidatus
Liberibacter asiaticus str. psy62]
(160 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|254780547|ref|YP_003064960.1| OmpA/MotB [Candidatus Liberibacter asiaticus str. psy62]
gi|254040224|gb|ACT57020.1| OmpA/MotB [Candidatus Liberibacter asiaticus str. psy62]
Length = 160
Score = 124 bits (311), Expect = 4e-27, Method: Composition-based stats.
Identities = 160/160 (100%), Positives = 160/160 (100%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS
Sbjct: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
Query: 61 IRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA 120
IRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA
Sbjct: 61 IRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA 120
Query: 121 SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRANT
Sbjct: 121 SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
>gi|186472491|ref|YP_001859833.1| OmpA/MotB domain-containing protein [Burkholderia phymatum STM815]
gi|184194823|gb|ACC72787.1| OmpA/MotB domain protein [Burkholderia phymatum STM815]
Length = 166
Score = 106 bits (264), Expect = 1e-21, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 71/161 (44%), Gaps = 8/161 (4%)
Query: 1 MQYSTIFIILSAIT-----MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFD 55
M+ + L+A + + G+D + + + + +E + + V F+
Sbjct: 1 MKK---LLTLAACAVSLSMLAACGGLDRSKEETLNKQAGIEVTQTKEGVQVRLPEKVLFN 57
Query: 56 TSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA 115
+ S+RP LS + L + +IEGH D +G+R + L RA +V +
Sbjct: 58 FNESSLRPDAATALSRVVVVLNRTHKPMIIEGHTDNVGTREYNQQLSEARAKSVADELER 117
Query: 116 RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
RGISASR+ + Y + P + + A+NRR + + G
Sbjct: 118 RGISASRITLKGYAFDRPVADNNTPEGRARNRRTEIVVMGE 158
>gi|153004433|ref|YP_001378758.1| OmpA/MotB domain-containing protein [Anaeromyxobacter sp. Fw109-5]
gi|152028006|gb|ABS25774.1| OmpA/MotB domain protein [Anaeromyxobacter sp. Fw109-5]
Length = 498
Score = 100 bits (249), Expect = 7e-20, Method: Composition-based stats.
Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 2/139 (1%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+ D + D + + +V V F+T S ++P ++L + S L
Sbjct: 360 CPDEAEDPGGGARDGCPDGVVTYRENRITVRGKVQFETGSARLKPESQRLLDQVASILRA 419
Query: 79 HD--CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
H +EGH D++G ++ L RRA +V + V RGI+ SR+ + YG+ P
Sbjct: 420 HPEIRRVRVEGHTDDVGPALTNKELSERRADSVRDALVRRGIAPSRLSIRGYGESRPIAP 479
Query: 137 GHDEDAYAKNRRAIVFLKG 155
+ AKNRR + G
Sbjct: 480 NKTKAGRAKNRRVEFVITG 498
>gi|67459626|ref|YP_247250.1| peptidoglycan-associated lipoprotein precursor [Rickettsia felis
URRWXCal2]
gi|67005159|gb|AAY62085.1| Peptidoglycan-associated lipoprotein precursor [Rickettsia felis
URRWXCal2]
Length = 156
Score = 100 bits (248), Expect = 8e-20, Method: Composition-based stats.
Identities = 44/154 (28%), Positives = 78/154 (50%), Gaps = 1/154 (0%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ + I + A+ +++ ++ E+SL + F G++V+F S +
Sbjct: 1 MKITKITLAFLALFVLAGCNTKKRVPQMDGMMNQGEETSLMKDFEKHAGNAVWFAFDSSA 60
Query: 61 IRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
+ P + L W + + +EGH DE G+R ++ LG RRA A + +GI
Sbjct: 61 LSPKAKEELERQACWLSKHPEVKATVEGHCDERGTREYNLGLGERRAAAAKKFLAHKGID 120
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
SR+ SYGK+ P++ G+ E+A+A NRRA+ +
Sbjct: 121 HSRLNTISYGKDRPAMMGNTEEAFAYNRRAVTVV 154
>gi|159025752|emb|CAO02050.1| outer membrane protein A [Bordetella trematum]
Length = 165
Score = 99.9 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 57/141 (40%), Gaps = 7/141 (4%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
G D + P + FFD +++P Q+L + +
Sbjct: 31 GCDGVPVAQKQPKPAPMAT------KVVFNADTFFDFDKATLKPEGRQLLDQVAQQAKAI 84
Query: 80 DC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ + GH D +G+ ++ L +RRA AV Y V +GI +R+ G+ P
Sbjct: 85 NLETIIAVGHTDSIGTEAYNMKLSVRRADAVKAYLVGQGIDPNRIYTEGKGEAQPIASNK 144
Query: 139 DEDAYAKNRRAIVFLKGCRAN 159
+ A+NRR + + G R+N
Sbjct: 145 TAEGRARNRRVEIEIVGSRSN 165
>gi|192361426|ref|YP_001981532.1| outer membrane protein [Cellvibrio japonicus Ueda107]
gi|190687591|gb|ACE85269.1| outer membrane protein [Cellvibrio japonicus Ueda107]
Length = 154
Score = 99.9 bits (247), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/144 (32%), Positives = 76/144 (52%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
+ A+ M + G K T + + +Q+Q + + V+FD Y++ V
Sbjct: 10 LTFAVVMSFLVGCSGASKKPVEETTQTSTAPVQQQVEAQLAHVVYFDFDQYALTAESRAV 69
Query: 69 LSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L L+ +EGHADE GSR ++ALG +RA AV ++ V +G+S S ++V S+
Sbjct: 70 LLAHADKLKGASVAVRLEGHADERGSREYNMALGEKRANAVRDFLVTQGVSGSSLEVVSF 129
Query: 129 GKEMPSVYGHDEDAYAKNRRAIVF 152
G+E P GHDE A+++NRR +
Sbjct: 130 GEEQPVALGHDESAWSQNRRVEIK 153
>gi|15604604|ref|NP_221122.1| peptidoglycan-associated lipoprotein precursor (pal) [Rickettsia
prowazekii str. Madrid E]
gi|3861299|emb|CAA15198.1| PEPTIDOGLYCAN-ASSOCIATED LIPOPROTEIN PRECURSOR (pal) [Rickettsia
prowazekii]
gi|292572420|gb|ADE30335.1| Peptidoglycan-associated lipoprotein precursor [Rickettsia
prowazekii Rp22]
Length = 155
Score = 98.3 bits (243), Expect = 3e-19, Method: Composition-based stats.
Identities = 47/154 (30%), Positives = 82/154 (53%), Gaps = 2/154 (1%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ + I + A+ M++ T+++ E+SL + F G++V+F S S
Sbjct: 1 MK-TKITLAFLALFMLAGCNTTKKTTQMAGMVHQCEETSLIKDFEKHAGNAVWFAFDSSS 59
Query: 61 IRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
+ P + L W + + +EGH DE G+R ++ALG RRA A + +GI+
Sbjct: 60 LSPKAKEELERQACWLSKHPEVKVTVEGHCDERGTREYNLALGERRAAAAKQFLANKGIA 119
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+R+ SYGK+ P++ G+ E+A++ NRRA+ L
Sbjct: 120 HNRLNTISYGKDKPAMIGNTEEAFSYNRRAVTVL 153
>gi|157829031|ref|YP_001495273.1| peptidoglycan-associated lipoprotein precursor [Rickettsia
rickettsii str. 'Sheila Smith']
gi|165933755|ref|YP_001650544.1| peptidoglycan-associated lipoprotein [Rickettsia rickettsii str.
Iowa]
gi|157801512|gb|ABV76765.1| peptidoglycan-associated lipoprotein precursor [Rickettsia
rickettsii str. 'Sheila Smith']
gi|165908842|gb|ABY73138.1| peptidoglycan-associated lipoprotein [Rickettsia rickettsii str.
Iowa]
Length = 155
Score = 97.2 bits (240), Expect = 6e-19, Method: Composition-based stats.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 2/154 (1%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ + I + A+ M++ + E+SL + F G++V+F S
Sbjct: 1 MK-TKITLAFLALCMLAGCNTTKRAPQFDGNMNQSEETSLMKDFEKHAGNAVWFAFDSSD 59
Query: 61 IRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
+ P + L W + + +EGH DE G++ ++ LG RRA A + +GI
Sbjct: 60 LSPKAKEALERQACWLSKHPEVKVTVEGHCDERGTKEYNLGLGERRAAAAKKFLAHKGID 119
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+R+ SYGK+ P++ G+ E+A+A NRRA+ L
Sbjct: 120 HNRLNTISYGKDRPAMMGNTEEAFAYNRRAVTVL 153
>gi|15893123|ref|NP_360837.1| peptidoglycan-associated lipoprotein precursor [Rickettsia conorii
str. Malish 7]
gi|15620330|gb|AAL03738.1| peptidoglycan-associated lipoprotein precursor [Rickettsia conorii
str. Malish 7]
Length = 155
Score = 97.2 bits (240), Expect = 7e-19, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 77/154 (50%), Gaps = 2/154 (1%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ + I + A+ +++ + E+SL + F G++V+F S +
Sbjct: 1 MK-TKITLAFLALCVLAGCNTTKRAPQFDGNMNQSEETSLMKDFEKHAGNAVWFAFDSSA 59
Query: 61 IRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
+ P + L W + + +EGH DE G++ ++ LG RRA A + +GI
Sbjct: 60 LSPKAKEELERQACWLSKHPEVKVTVEGHCDERGTKEYNLGLGERRAAAAKKFLAHKGID 119
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+R+ SYGK+ P++ G+ E+A+A NRRA+ +
Sbjct: 120 HNRLNTISYGKDRPAMMGNTEEAFAYNRRAVTVV 153
>gi|238650590|ref|YP_002916442.1| peptidoglycan-associated lipoprotein precursor [Rickettsia
peacockii str. Rustic]
gi|238624688|gb|ACR47394.1| peptidoglycan-associated lipoprotein precursor [Rickettsia
peacockii str. Rustic]
Length = 155
Score = 97.2 bits (240), Expect = 8e-19, Method: Composition-based stats.
Identities = 43/154 (27%), Positives = 78/154 (50%), Gaps = 2/154 (1%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ + I + A+ +++ + E+SL + F G++V+F S +
Sbjct: 1 MK-TKITLAFLALCVLAGCNTTKRAPQFDGNMNQSEETSLMKDFEKHAGNAVWFAFDSSA 59
Query: 61 IRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
+ P + L W + + +EGH DE G++N ++ LG RRA A + +GI
Sbjct: 60 LSPKAKEELERQACWLSKHPEVKVTVEGHCDERGTKNYNLGLGERRAAAAKKFLAHKGID 119
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+R+ SYGK+ P++ G+ E+A+A NRRA+ +
Sbjct: 120 HNRLNTISYGKDRPAMMGNTEEAFAYNRRAVTVV 153
>gi|229587133|ref|YP_002845634.1| Peptidoglycan-associated lipoprotein precursor [Rickettsia africae
ESF-5]
gi|228022183|gb|ACP53891.1| Peptidoglycan-associated lipoprotein precursor [Rickettsia africae
ESF-5]
Length = 155
Score = 96.8 bits (239), Expect = 8e-19, Method: Composition-based stats.
Identities = 44/154 (28%), Positives = 78/154 (50%), Gaps = 2/154 (1%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ + I + A+ +++ + E+SL + F G++V+F S +
Sbjct: 1 MK-TKIALAFLALCVLAGCNTTKRAPQFDGNMNQSEETSLMKDFEKHAGNAVWFAFDSSA 59
Query: 61 IRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
+ P + L W + + +EGH DE G++ ++ LG RRA A + V +GI
Sbjct: 60 LSPKAKEELERQACWLSKHPEVKVTVEGHCDERGTKEYNLGLGERRAAAAQKFLVHKGID 119
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+R+ SYGKE P++ G+ E+A+A NRRA+ +
Sbjct: 120 HNRLNTISYGKERPAMMGNTEEAFAYNRRAVTVV 153
>gi|157804141|ref|YP_001492690.1| guanylate kinase [Rickettsia canadensis str. McKiel]
gi|157785404|gb|ABV73905.1| guanylate kinase [Rickettsia canadensis str. McKiel]
Length = 155
Score = 96.8 bits (239), Expect = 8e-19, Method: Composition-based stats.
Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 2/154 (1%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ + I + A+ +++ + S E SL + F G++V+FD S
Sbjct: 1 MK-TKITLAFLALFVLAGCNTTKKAPQFDSGVNQGEEISLMKDFEKHAGNAVWFDFDSSD 59
Query: 61 IRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
+ P + L WL + + +EGH DE G+R ++ LG RRA A + +GI
Sbjct: 60 LSPKAKEELERQACWLLKHPEVKATVEGHCDERGTREYNLGLGERRAAAAKKFLAHKGID 119
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+R+ + SYGK+ P++ G+ E+A+A NRRA+ +
Sbjct: 120 NNRLNIISYGKDRPAMMGNTEEAFAYNRRAVTVI 153
>gi|91978605|ref|YP_571264.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
gi|91685061|gb|ABE41363.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
Length = 165
Score = 96.4 bits (238), Expect = 1e-18, Method: Composition-based stats.
Identities = 52/151 (34%), Positives = 74/151 (49%), Gaps = 1/151 (0%)
Query: 4 STIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRP 63
+ +L+ M + Q+ F +VGD VFF++ + P
Sbjct: 11 LKLAAVLAVALSMGACANNKTGLGADGAMASAATPGSQQDFVVNVGDRVFFESDQTELSP 70
Query: 64 ADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASR 122
L WL+ ++ F IEGHADE G+R +IALG RRA +V NY +RGI SR
Sbjct: 71 QAAATLDKQAQWLQTYNRYSFTIEGHADERGTREYNIALGARRAQSVRNYLSSRGIEPSR 130
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
M+ SYGKE P +D +++NRRA+ L
Sbjct: 131 MRTISYGKERPVAVCNDISCWSQNRRAVTVL 161
>gi|157826223|ref|YP_001493943.1| peptidoglycan-associated lipoprotein precursor [Rickettsia akari
str. Hartford]
gi|157800181|gb|ABV75435.1| Peptidoglycan-associated lipoprotein precursor [Rickettsia akari
str. Hartford]
Length = 155
Score = 96.4 bits (238), Expect = 1e-18, Method: Composition-based stats.
Identities = 47/154 (30%), Positives = 80/154 (51%), Gaps = 2/154 (1%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ + I + A+ +++ K+ + E+SL + F G++V+F S S
Sbjct: 1 MK-TKITLAFLALFVLAGCNTTKRTVKMDGMMSQCEETSLMKDFEKHAGNAVWFAFDSSS 59
Query: 61 IRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
+ P + L W + + +EGH DE G+R ++ LG RRA A + V +GI
Sbjct: 60 LSPKAKEELERQACWLSKHPEVKATVEGHCDERGTREYNLGLGERRAEAAKKFLVHKGID 119
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
SR+ SYGK+ P++ G+ E+A+A NRRA+ +
Sbjct: 120 HSRLNTISYGKDRPAMIGNTEEAFAYNRRAVTVV 153
>gi|310781368|gb|ADP24154.1| outer membrane protein A [Bordetella avium]
gi|310781370|gb|ADP24155.1| outer membrane protein A [Bordetella avium]
Length = 198
Score = 96.0 bits (237), Expect = 1e-18, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 59/139 (42%), Gaps = 5/139 (3%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
G D + + V+ + + ++ FFD +I+P QVL + ++
Sbjct: 63 GCDGVPVAQAPEAPVVAPTVTK----VTLNADTFFDFDKSTIKPEGRQVLDQVADTVQSI 118
Query: 80 DC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
D + GH D +G+ + L RRA AV Y V +G+ A R+ G+ P
Sbjct: 119 DLETLIATGHTDSIGAEAYNQKLSERRANAVKAYLVNKGVPADRIYTEGKGEAQPVASNK 178
Query: 139 DEDAYAKNRRAIVFLKGCR 157
+ A+NRR + + G R
Sbjct: 179 TREGRAQNRRVEIEIVGSR 197
>gi|163796931|ref|ZP_02190887.1| Outer membrane protein and related peptidoglycan-associated lipo
protein [alpha proteobacterium BAL199]
gi|159177678|gb|EDP62229.1| Outer membrane protein and related peptidoglycan-associated lipo
protein [alpha proteobacterium BAL199]
Length = 165
Score = 96.0 bits (237), Expect = 1e-18, Method: Composition-based stats.
Identities = 52/164 (31%), Positives = 76/164 (46%), Gaps = 11/164 (6%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTK----------ISSPDTVLNESSLQEQFSSSVGD 50
M + +A+ M++ T ++P +E F +VGD
Sbjct: 1 MMRMKFLSVFAAVAMLAACETAPDSTANTGAGGSTTTATAPAPKGPAPGSREDFVVNVGD 60
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
VFF S + L W + +EGHADE G+R ++ALG RRA A
Sbjct: 61 RVFFALDSSEVAANGRTTLEKQAFWLRKYPQATVTVEGHADERGTREYNLALGERRAAAA 120
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+Y V+ G+ SR+ SYGKE P V G +E+A+AKNRRA+ +
Sbjct: 121 RDYLVSLGVDPSRIATISYGKERPDVLGSNEEAWAKNRRAVTVI 164
>gi|292492806|ref|YP_003528245.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4]
gi|291581401|gb|ADE15858.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4]
Length = 286
Score = 96.0 bits (237), Expect = 1e-18, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 2/125 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADE 91
L+ + + ++GD + F+ + P +Q L L ++L+++ +IEGH D
Sbjct: 152 AELDAEKTKRGYVLTLGD-ILFEVDRAELTPGGMQNLFRLVTFLKEYPDREVVIEGHTDS 210
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
GS + L RRA +V+ + + GIS R+ YG+ P +NRR +
Sbjct: 211 TGSAVYNQELSQRRADSVYKFLMNNGISPERIVARGYGEAYPVAPNDTAAGRQRNRRVEI 270
Query: 152 FLKGC 156
+ G
Sbjct: 271 VILGA 275
>gi|34581206|ref|ZP_00142686.1| peptidoglycan-associated lipoprotein precursor [Rickettsia sibirica
246]
gi|28262591|gb|EAA26095.1| peptidoglycan-associated lipoprotein precursor [Rickettsia sibirica
246]
Length = 155
Score = 96.0 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 76/154 (49%), Gaps = 2/154 (1%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ + I + + +++ + E+SL + F G++V+F S +
Sbjct: 1 MK-TKITLAFLTLFVLAGCNTTKRAPQFDGNMNQSEETSLMKDFEKHAGNAVWFAFDSSA 59
Query: 61 IRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
+ P + L W + + IEGH DE G++ ++ LG RRA A + +GI
Sbjct: 60 LSPKAKEELERQACWLSKHPEVKVTIEGHCDERGTKEYNLGLGERRAAAAKKFLAHKGID 119
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+R+ SYGK+ P++ G+ E+A+A NRRA+ +
Sbjct: 120 HNRLNTISYGKDRPAMMGNTEEAFAYNRRAVTVV 153
>gi|86748938|ref|YP_485434.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
gi|86571966|gb|ABD06523.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
Length = 165
Score = 96.0 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 53/151 (35%), Positives = 75/151 (49%), Gaps = 1/151 (0%)
Query: 4 STIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRP 63
+ +L+ M + Q+ F +VGD VFF++ + P
Sbjct: 11 LKLAAVLAVALSMGACANNKTGLGADGAMASAASPGSQQDFVVNVGDRVFFESDQTDLSP 70
Query: 64 ADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASR 122
I L WL+ ++ F IEGHADE G+R +IALG RRA +V NY +RGI SR
Sbjct: 71 QAIATLDKQAQWLQSYNRYSFTIEGHADERGTREYNIALGARRAQSVRNYLASRGIDPSR 130
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
M+ SYGKE P +D +++NRRA+ L
Sbjct: 131 MRTISYGKERPVAVCNDISCWSQNRRAVTVL 161
>gi|51473939|ref|YP_067696.1| peptidoglycan-associated lipoprotein precursor [Rickettsia typhi
str. Wilmington]
gi|51460251|gb|AAU04214.1| peptidoglycan-associated lipoprotein precursor [Rickettsia typhi
str. Wilmington]
Length = 155
Score = 96.0 bits (237), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/154 (30%), Positives = 82/154 (53%), Gaps = 2/154 (1%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ + I + A+ M+ T+++ E+SL + F G++V+F S S
Sbjct: 1 MK-TKITLAFLALFMLVGCNTTKKTTQMAGMVNQCEETSLMKDFEKYAGNAVWFAFDSAS 59
Query: 61 IRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
+ P + L W + + +EGH DE G+R+ +IALG RRA A + +GI+
Sbjct: 60 LSPKAKEDLERQACWLSKHPEVKVTVEGHCDERGTRDYNIALGERRAAAAKQFLANKGIA 119
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+R+ SYGK+ P++ G+ E+A++ NRRA+ +
Sbjct: 120 HNRLNTISYGKDKPAMMGNTEEAFSYNRRAVTVV 153
>gi|319957287|ref|YP_004168550.1| ompa/motb domain protein [Nitratifractor salsuginis DSM 16511]
gi|319419691|gb|ADV46801.1| OmpA/MotB domain protein [Nitratifractor salsuginis DSM 16511]
Length = 351
Score = 95.6 bits (236), Expect = 2e-18, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 60/140 (42%), Gaps = 2/140 (1%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
+ ++ + K + + E +V + V FD + + ++P + L + +
Sbjct: 210 LRVAKYTKAEAKPTPEQVGIIVRKTSEGSMLTVPEKVLFDFNKFILKPEAKKALDVVADY 269
Query: 76 LEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMP 133
+ H ++ G+ D +G+ ++ L L+RA +V +Y + + K+ GK P
Sbjct: 270 IRSHPARQIVVTGYTDNIGTDAYNLRLSLQRAQSVADYLMDCGKVDPKLFKIVGKGKANP 329
Query: 134 SVYGHDEDAYAKNRRAIVFL 153
E+ AKNRR + L
Sbjct: 330 IADNATEEGRAKNRRVEIRL 349
>gi|261868491|ref|YP_003256413.1| peptidoglycan-associated lipoprotein [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|293390507|ref|ZP_06634841.1| peptidoglycan-associated lipoprotein [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|62548396|gb|AAX86841.1| peptidoglycan-associated lipoprotein [Aggregatibacter
actinomycetemcomitans]
gi|261413823|gb|ACX83194.1| peptidoglycan-associated lipoprotein [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|290951041|gb|EFE01160.1| peptidoglycan-associated lipoprotein [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 155
Score = 95.3 bits (235), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/151 (30%), Positives = 78/151 (51%), Gaps = 1/151 (0%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSI 61
+++ ++ ++ +++ G N + S + Q ++V+F Y I
Sbjct: 3 KFTKALLVAGSVAVLAACGSSNKNESGSGSNNGQTFGGYSVQDLQQRYNTVYFGFDKYDI 62
Query: 62 RPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA 120
Q+L ++L +EG+ DE G+ ++ALG RRA AV N+ A+G+ A
Sbjct: 63 EGEYTQILDAHAAYLNATPATSVRVEGNTDERGTPEYNMALGERRARAVQNFLTAKGVKA 122
Query: 121 SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
++ SYG+E P+V GHDE AYAKNRRA++
Sbjct: 123 GQISTVSYGEEKPAVLGHDESAYAKNRRAVL 153
>gi|315498692|ref|YP_004087496.1| peptidoglycan-associated lipoprotein [Asticcacaulis excentricus CB
48]
gi|315416704|gb|ADU13345.1| peptidoglycan-associated lipoprotein [Asticcacaulis excentricus CB
48]
Length = 184
Score = 95.3 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 26/173 (15%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNES---------------------- 38
M S + L A +S++ ++ +P + E
Sbjct: 1 MTKSVFKLALMACATLSVAACAGKKPEVVTPPPAVAEQPTPAPAYTPPPAADTKPLSPTG 60
Query: 39 ---SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGS 94
Q+ F +VGD VFF+ S+R +L +W + IEG+ADE G+
Sbjct: 61 PVPGSQQDFVVNVGDRVFFELDQSSLREDAKALLDKQAAWLVRYPAVKVRIEGNADERGT 120
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
R + ALG RRA +V Y ++G+ SR+ SYGKE P G DE+A+++NR
Sbjct: 121 REYNFALGARRAESVSQYLTSKGVVPSRISTISYGKENPIATGTDEEAWSQNR 173
>gi|84687704|ref|ZP_01015577.1| OmpA/MotB family protein [Maritimibacter alkaliphilus HTCC2654]
gi|84664287|gb|EAQ10778.1| OmpA/MotB family protein [Rhodobacterales bacterium HTCC2654]
Length = 165
Score = 95.3 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 50/159 (31%), Positives = 81/159 (50%), Gaps = 6/159 (3%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPD-----TVLNESSLQEQFSSSVGDSVFFD 55
M+ +TI +++ +S D ++ + +N+ + F+ ++GD V F
Sbjct: 1 MKKTTIALLMIGAVALSACSRDRYNSATDGANNSGVAGSVNDPTSTAYFNQTIGDRVLFM 60
Query: 56 TSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
++ P +L WL + +IEGHADE G+R ++ALG RRA +V +Y +
Sbjct: 61 VDQSTLSPQAQGILDQQAQWLNSNTAYSAIIEGHADEQGTREYNVALGARRASSVQSYLI 120
Query: 115 ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RG++ R+K SYGKE P DE Y +NRRA+ L
Sbjct: 121 ERGVAPGRLKTVSYGKERPLAICSDESCYQQNRRAVTVL 159
>gi|15602831|ref|NP_245903.1| hypothetical protein PM0966 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|18202558|sp|Q51886|PAL_PASMU RecName: Full=Outer membrane protein P6; Short=OMP P6; AltName:
Full=P6-like; AltName: Full=Peptidoglycan-associated
lipoprotein; Flags: Precursor
gi|841126|gb|AAA79373.1| outer membrane protein, similar to Haemophilus influenzae outer
membrane protein P6, Swiss-Prot Accession Number P10324
[Pasteurella multocida]
gi|12721291|gb|AAK03050.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 150
Score = 95.3 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 45/151 (29%), Positives = 81/151 (53%), Gaps = 6/151 (3%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSI 61
+ + + ++ ++ +++ G D + LQ+++ ++V+F Y+I
Sbjct: 3 KLTKVLLVAGSVAVLAACGSSKKDESAGQMFGGYSVQDLQQRY-----NTVYFGFDKYNI 57
Query: 62 RPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA 120
+Q+L + ++EG+ DE G+ +IALG RRA AV +Y A+G+ A
Sbjct: 58 EGEYVQILDAHAAFLNATPATKVVVEGNTDERGTPEYNIALGQRRADAVKHYLSAKGVQA 117
Query: 121 SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
++ SYG+E P+V GHDE AY+KNRRA++
Sbjct: 118 GQVSTVSYGEEKPAVLGHDEAAYSKNRRAVL 148
>gi|237859129|gb|ACR23740.1| outer membrane lipoprotein p6 [Avibacterium paragallinarum]
gi|237859131|gb|ACR23741.1| outer membrane lipoprotein p6 [Avibacterium paragallinarum]
Length = 150
Score = 95.3 bits (235), Expect = 3e-18, Method: Composition-based stats.
Identities = 46/153 (30%), Positives = 80/153 (52%), Gaps = 7/153 (4%)
Query: 1 MQ-YSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSY 59
M+ + + I+ ++ +++ ++ + LQ+++ ++V+F Y
Sbjct: 1 MKNFKKLLIVAGSVAVLAACSSSKHTETVAQTFGGYSVQDLQQRY-----NTVYFGFDKY 55
Query: 60 SIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI 118
+I Q+L + L+EG+ DE G+ +IALG RRA AV NY A+G+
Sbjct: 56 NIEGEYQQILDAHAAYLTATPASKVLVEGNTDERGTPEYNIALGQRRADAVANYLSAKGV 115
Query: 119 SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
A+++ SYG+E P+ GH E AYAKNRRA++
Sbjct: 116 QATQLSTVSYGEEKPAELGHTEAAYAKNRRAVL 148
>gi|33597667|ref|NP_885310.1| outer membrane protein A precursor [Bordetella parapertussis 12822]
gi|33602447|ref|NP_890007.1| outer membrane protein A precursor [Bordetella bronchiseptica RB50]
gi|33574095|emb|CAE38420.1| outer membrane protein A precursor [Bordetella parapertussis]
gi|33576886|emb|CAE33966.1| outer membrane protein A precursor [Bordetella bronchiseptica RB50]
Length = 193
Score = 94.9 bits (234), Expect = 4e-18, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 50/132 (37%), Gaps = 1/132 (0%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEG 87
E FFD +++P Q+L + D + G
Sbjct: 62 DGVPVAQKEKPAPMAAKVVFNADTFFDFDKSTLKPEGRQLLDQVAQQAGTIDLETIIAVG 121
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
H D +G+ + L RRA AV Y V++GI +R+ G+ P + A+NR
Sbjct: 122 HTDSIGTEAYNQKLSERRAAAVKTYLVSKGIDPNRIYTEGKGELQPIASNKTREGRAQNR 181
Query: 148 RAIVFLKGCRAN 159
R + + G R N
Sbjct: 182 RVEIEIVGSRKN 193
>gi|163856192|ref|YP_001630490.1| outer membrane protein A precursor [Bordetella petrii DSM 12804]
gi|163259920|emb|CAP42221.1| outer membrane protein A precursor [Bordetella petrii]
Length = 193
Score = 94.5 bits (233), Expect = 4e-18, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 51/128 (39%), Gaps = 1/128 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHA 89
P FFD +++P Q+L + + D + GH
Sbjct: 65 PVAQAPAKPTPMATKVVFNADTFFDFDKSTLKPEGRQLLDQVAQQAQGIDLETIIAVGHT 124
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D +G+ + L RRA +V +Y V++G+ +R+ G+ P + A+NRR
Sbjct: 125 DSIGTEKYNQGLSERRAASVKSYLVSKGVDPNRIYTEGKGELQPVASNKTREGRAQNRRV 184
Query: 150 IVFLKGCR 157
+ + G R
Sbjct: 185 EIEVVGSR 192
>gi|163757275|ref|ZP_02164371.1| OmpA/MotB [Kordia algicida OT-1]
gi|161322760|gb|EDP94113.1| OmpA/MotB [Kordia algicida OT-1]
Length = 617
Score = 94.5 bits (233), Expect = 4e-18, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 8/140 (5%)
Query: 22 DNLDTKISSPDTVLN-ESSLQEQFSSSVGD------SVFFDTSSYSIRPADIQVLSNLGS 74
DN D + T+ + + E ++ D V+FD S + ++L N+ +
Sbjct: 473 DNKDKCPTVVGTIEGCPAEVVETEVVTIPDPAVGERKVYFDFDSSKLDQNAKEILDNIAA 532
Query: 75 WLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
L+ + I GHAD G+ + L + RA A+ NY ++ +S S + +T G+ P
Sbjct: 533 NLKNDAGYNISIIGHADSRGTDRYNDKLSVERAQAIKNYLDSKKLSNSNITITGKGESAP 592
Query: 134 SVYGHDEDAYAKNRRAIVFL 153
+ AKNRR + +
Sbjct: 593 IAPNTTPEGRAKNRRVELII 612
>gi|157964921|ref|YP_001499745.1| peptidoglycan-associated lipoprotein precursor [Rickettsia
massiliae MTU5]
gi|157844697|gb|ABV85198.1| Peptidoglycan-associated lipoprotein precursor [Rickettsia
massiliae MTU5]
Length = 164
Score = 94.5 bits (233), Expect = 4e-18, Method: Composition-based stats.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 1/154 (0%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ L+ + + + E+SL + F G++V+F S +
Sbjct: 9 MKTKLTLAFLALFVLAGCNTTKRAPQFDGNMMNQGEETSLMKDFEKHAGNAVWFAFDSSA 68
Query: 61 IRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
+ P + L W + + +EGH DE G++ +I LG RRA AV + +GI
Sbjct: 69 LSPKAKEELERQACWLSKHPEVKVTVEGHCDERGAKEYNIGLGERRAAAVKKFLAHKGID 128
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+R+ SYGK+ P++ G+ E+A+A NRRA+ +
Sbjct: 129 HNRLNTISYGKDRPAMMGNTEEAFAYNRRAVTVV 162
>gi|332284746|ref|YP_004416657.1| outer membrane protein A precursor [Pusillimonas sp. T7-7]
gi|330428699|gb|AEC20033.1| outer membrane protein A precursor [Pusillimonas sp. T7-7]
Length = 192
Score = 94.5 bits (233), Expect = 4e-18, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 5/141 (3%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
+GI D + V+ ++ + + FFD +++P QVL + S +
Sbjct: 55 ATGIPGCDGVPVAEAPVVAPTATK----VVLNADTFFDFDKSTLKPEGRQVLDQVASQAD 110
Query: 78 KHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ + GH D +G+ + L RRA +V +Y V++G++A R+ V G+ P
Sbjct: 111 TINLETLIATGHTDSIGTEQYNQGLSQRRANSVKDYLVSKGVAADRIYVEGKGETSPVAS 170
Query: 137 GHDEDAYAKNRRAIVFLKGCR 157
+ A+NRR + + G R
Sbjct: 171 NSTREGRAQNRRVEIEIVGTR 191
>gi|300113742|ref|YP_003760317.1| OmpA/MotB domain-containing protein [Nitrosococcus watsonii C-113]
gi|299539679|gb|ADJ27996.1| OmpA/MotB domain protein [Nitrosococcus watsonii C-113]
Length = 286
Score = 94.5 bits (233), Expect = 5e-18, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 2/122 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADE 91
LN + + ++GD + F+ S + +Q L L ++L+++ +IEGH D
Sbjct: 152 AALNAEKTERGYVLTLGD-ILFEVDSAELTSGGMQNLFRLVTFLKEYPDRQVVIEGHTDS 210
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
GS ++ L RRA AV+ + V GIS +R+ YGK P + KNRR +
Sbjct: 211 TGSGVYNMELSQRRADAVYEFLVNNGISPARIAAHGYGKAYPVAPNNTAAGRQKNRRVEI 270
Query: 152 FL 153
+
Sbjct: 271 VI 272
>gi|33592100|ref|NP_879744.1| outer membrane protein A precursor [Bordetella pertussis Tohama I]
gi|33571744|emb|CAE41245.1| outer membrane protein A precursor [Bordetella pertussis Tohama I]
gi|332381516|gb|AEE66363.1| outer membrane protein A precursor [Bordetella pertussis CS]
Length = 193
Score = 94.1 bits (232), Expect = 5e-18, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 51/132 (38%), Gaps = 1/132 (0%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEG 87
E S FFD +++P Q+L + D + G
Sbjct: 62 DGVPVAQKEKSAPMAAKVVFNADTFFDFDKSTLKPEGRQLLDQVAQQAGTIDLETIIAVG 121
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
H D +G+ + L RRA AV Y V++GI +R+ G+ P + A+NR
Sbjct: 122 HTDSIGTEAYNQKLSERRAAAVKTYLVSKGIDPNRIYTEGKGELQPIASNKTREGRAQNR 181
Query: 148 RAIVFLKGCRAN 159
R + + G R N
Sbjct: 182 RVEIEIVGSRKN 193
>gi|239832093|ref|ZP_04680422.1| OmpA family protein [Ochrobactrum intermedium LMG 3301]
gi|239824360|gb|EEQ95928.1| OmpA family protein [Ochrobactrum intermedium LMG 3301]
Length = 260
Score = 94.1 bits (232), Expect = 5e-18, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 1/129 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHA 89
T ++ + +Q ++ S+ FDT ++ L+++ L K + + GH
Sbjct: 130 QGTGVSVTRNGDQIILNMPSSITFDTDQDQVKSQFYPTLNSVAIVLRKFNQTLVDVYGHT 189
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GS + + AL RRA +V +Y ++GI R V YG P + A+NRR
Sbjct: 190 DSTGSVSHNQALSQRRAASVASYLGSQGIDPRRFAVIGYGASQPVATNATPEGRAQNRRV 249
Query: 150 IVFLKGCRA 158
+ + RA
Sbjct: 250 EIQISPLRA 258
>gi|254436394|ref|ZP_05049900.1| Thrombospondin type 3 repeat family [Nitrosococcus oceani AFC27]
gi|207088084|gb|EDZ65357.1| Thrombospondin type 3 repeat family [Nitrosococcus oceani AFC27]
Length = 344
Score = 94.1 bits (232), Expect = 6e-18, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLR 104
+ D V F S + P +L + + + + I GH D G+ + + L
Sbjct: 232 VVLEDGVHFGFDSAKLSPNAHTILDKVVENMRTYPDLEITIAGHTDSTGNADYNQRLSQL 291
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA A NY ++GI SRM+ YG+E P ++ AKNRR +
Sbjct: 292 RAEAAMNYLASKGIDPSRMEAIGYGEERPIASNSTKEGRAKNRRVEL 338
>gi|317402977|gb|EFV83516.1| outer membrane protein A [Achromobacter xylosoxidans C54]
Length = 197
Score = 94.1 bits (232), Expect = 6e-18, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 56/141 (39%), Gaps = 4/141 (2%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
+GI D + + FFD +++P Q+L +
Sbjct: 59 ATGIPGCDGVPVAQQKAKPAPMAAK---VVFNADTFFDFDKSTLKPEGRQLLDQVAQQAR 115
Query: 78 KHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ + GH D +G+ + L RRA +V Y V++GI +R+ G++ P
Sbjct: 116 GIELETIIAVGHTDSIGTDAYNQKLSERRAASVKAYLVSKGIDPNRIYTEGKGEKNPIAS 175
Query: 137 GHDEDAYAKNRRAIVFLKGCR 157
++ A+NRR + + G R
Sbjct: 176 NKTKEGRAQNRRVEIEIVGSR 196
>gi|239946700|ref|ZP_04698453.1| peptidoglycan-associated lipoprotein [Rickettsia endosymbiont of
Ixodes scapularis]
gi|239920976|gb|EER21000.1| peptidoglycan-associated lipoprotein [Rickettsia endosymbiont of
Ixodes scapularis]
Length = 155
Score = 94.1 bits (232), Expect = 6e-18, Method: Composition-based stats.
Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 2/154 (1%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ + I + A+ +++ + E+SL + F G++V+F S +
Sbjct: 1 MK-TKITLAFLALFVLAGCNTTKRAPQFDGNMNQGEETSLMKDFEKHAGNAVWFAFDSSA 59
Query: 61 IRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
+ P + L W + + IEGH DE G+R ++ LG RRA + +GI
Sbjct: 60 LSPKAKEELERQACWLSKHPEVKATIEGHCDERGTREYNLGLGERRAAVAKKFLANKGID 119
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+R+ SYGK+ P++ G+ E+A+A NRRA+ +
Sbjct: 120 HNRLNTISYGKDRPAMMGNTEEAFAYNRRAVTVV 153
>gi|237859127|gb|ACR23739.1| outer membrane lipoprotein p6 [Avibacterium paragallinarum]
Length = 150
Score = 94.1 bits (232), Expect = 6e-18, Method: Composition-based stats.
Identities = 46/153 (30%), Positives = 80/153 (52%), Gaps = 7/153 (4%)
Query: 1 MQ-YSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSY 59
M+ + + I+ ++ +++ ++ + LQ+++ ++V+F Y
Sbjct: 1 MKNFKKLLIVAGSVAVLAACSSSKHTETVAQTFGGYSVQDLQQRY-----NTVYFGFDKY 55
Query: 60 SIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI 118
+I Q+L + L+EG+ DE G+ +IALG RRA AV NY A+G+
Sbjct: 56 NIEGEYQQILDAHAAYLTATPASKVLVEGNTDERGTPEYNIALGQRRADAVANYLSAKGV 115
Query: 119 SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
A+++ SYG+E P+ GH E AYAKNRRA++
Sbjct: 116 QATQLSTVSYGEEKPTELGHTEAAYAKNRRAVL 148
>gi|311104908|ref|YP_003977761.1| outer membrane protein A [Achromobacter xylosoxidans A8]
gi|310759597|gb|ADP15046.1| outer membrane protein A [Achromobacter xylosoxidans A8]
Length = 193
Score = 93.7 bits (231), Expect = 7e-18, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 55/141 (39%), Gaps = 4/141 (2%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
+GI D + + FFD +++P Q+L +
Sbjct: 55 ATGIPGCDGVPVAQQKAKPAPMAAK---VVFNADTFFDFDKSTLKPEGRQLLDQVAQQAR 111
Query: 78 KHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
D + GH D +G+ + L RRA +V Y V++GI +R+ G+ P
Sbjct: 112 GIDLETIIAVGHTDSIGTEAYNQKLSERRAASVKTYLVSKGIDPNRIYTEGKGELNPIAS 171
Query: 137 GHDEDAYAKNRRAIVFLKGCR 157
++ A+NRR + + G R
Sbjct: 172 NKTKEGRAQNRRVEIEIVGSR 192
>gi|148287120|emb|CAK36854.1| outer membrane protein A [Bordetella ansorpii]
Length = 181
Score = 93.7 bits (231), Expect = 7e-18, Method: Composition-based stats.
Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 3/144 (2%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
I G D + ++ + FFD +++P Q+L + S
Sbjct: 39 ATGIPGCDGVPVAQAATPRAPAPQPTASKVV--FNADTFFDFDKSTLKPEGRQLLDQVAS 96
Query: 75 WLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
+ + + GH D +GS + L RRA +V +Y V++GI +R+ G++ P
Sbjct: 97 QVNTINLETLIAVGHTDSIGSDAYNQKLSERRAASVKSYLVSKGIDPNRIYTEGKGEKQP 156
Query: 134 SVYGHDEDAYAKNRRAIVFLKGCR 157
+ AKNRR + + G R
Sbjct: 157 VASNSTREGRAKNRRVEIEIVGTR 180
>gi|312795362|ref|YP_004028284.1| OmpA family protein [Burkholderia rhizoxinica HKI 454]
gi|312167137|emb|CBW74140.1| OmpA family protein [Burkholderia rhizoxinica HKI 454]
Length = 224
Score = 93.7 bits (231), Expect = 8e-18, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 1/138 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
I N + ++ ++ SV FDT+SY+I+P+ VL + L +H
Sbjct: 82 AIKNKLSGATAGTGTQVSEQPDGSLKLNIPSSVSFDTNSYAIKPSFTPVLDQVAQTLTQH 141
Query: 80 DCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ GH D G + L RA +V Y G++A R+ G+ P
Sbjct: 142 PELVAHVVGHTDSTGQPRYNQMLSQERAQSVAQYLALHGVAAQRLAAEGRGQSQPIADNS 201
Query: 139 DEDAYAKNRRAIVFLKGC 156
E A+NRR ++L+
Sbjct: 202 TEAGRAQNRRVEIYLRAT 219
>gi|77165990|ref|YP_344515.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707]
gi|76884304|gb|ABA58985.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707]
Length = 319
Score = 93.7 bits (231), Expect = 8e-18, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLR 104
+ D V F S + P +L + + + + I GH D G+ + + L
Sbjct: 207 VVLEDGVHFGFDSAKLSPNAHTILDKVVENMRTYPDLEITIAGHTDSTGNADYNQRLSQL 266
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA A NY ++GI SRM+ YG+E P ++ AKNRR +
Sbjct: 267 RAEAAMNYLASKGIDPSRMEAIGYGEERPIASNSTKEGRAKNRRVEL 313
>gi|293604168|ref|ZP_06686576.1| outer membrane protein A [Achromobacter piechaudii ATCC 43553]
gi|292817393|gb|EFF76466.1| outer membrane protein A [Achromobacter piechaudii ATCC 43553]
Length = 193
Score = 93.7 bits (231), Expect = 8e-18, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 55/141 (39%), Gaps = 4/141 (2%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
+GI D + + FFD +++P Q+L +
Sbjct: 55 ATGIPGCDGVPVAQQKAKPAPMAAK---VVFNADTFFDFDKSTLKPEGRQLLDQVAQQAR 111
Query: 78 KHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ + GH D +G+ + L RRA +V Y V++GI +R+ G+ P
Sbjct: 112 GIELETIIAVGHTDSIGTEAYNQKLSERRAASVKTYLVSKGIDPNRIYTEGKGELNPIAS 171
Query: 137 GHDEDAYAKNRRAIVFLKGCR 157
++ A+NRR + + G R
Sbjct: 172 NKTKEGRAQNRRVEIEIVGSR 192
>gi|50083884|ref|YP_045394.1| putative lipoprotein [Acinetobacter sp. ADP1]
gi|49529860|emb|CAG67572.1| putative lipoprotein precursor [Acinetobacter sp. ADP1]
Length = 159
Score = 93.3 bits (230), Expect = 9e-18, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 67/157 (42%), Gaps = 4/157 (2%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNES---SLQEQFSSSVGDSVFFDTS 57
M ++I I + + + ++G + +L + E ++ + + + F+
Sbjct: 1 MYNNSIKISILGVICLILAGCLSFGPLKYKQVKMLQKEGFVQTDEGWTLGLPERLLFEFD 60
Query: 58 SYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
+ PA Q + L + L K+ + G+ D +G+R+ ++ L RA +V F+
Sbjct: 61 KSEVNPAHQQEIIRLANQLNKYGLHKLKVVGYTDNIGNRDYNLKLSQARAQSVAAIFINN 120
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ + +++ G P + E+ A NRR + +
Sbjct: 121 SFTPNHIQIIGRGSNQPLLPNTTEENRAANRRVAIVI 157
>gi|159025750|emb|CAO02049.1| outer membrane protein A [Bordetella holmesii]
Length = 177
Score = 93.3 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 50/130 (38%), Gaps = 1/130 (0%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEG 87
E FFD ++P Q+L + + D + G
Sbjct: 46 DGVPVAQKEKPAPMAAKVVFNADTFFDFDKSVLKPEGRQLLDQVAQQAKAIDLETIIAVG 105
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
H D +G+ ++ L RRA +V Y V++GI +R+ G+ P + A+NR
Sbjct: 106 HTDSIGTEAYNLKLSDRRAASVKAYLVSKGIDPNRIYTEGKGEAQPIATNKTAEGRARNR 165
Query: 148 RAIVFLKGCR 157
R + + G R
Sbjct: 166 RVEIEIVGSR 175
>gi|315634712|ref|ZP_07889996.1| peptidoglycan-associated lipoprotein [Aggregatibacter segnis ATCC
33393]
gi|315476660|gb|EFU67408.1| peptidoglycan-associated lipoprotein [Aggregatibacter segnis ATCC
33393]
Length = 150
Score = 93.3 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 44/151 (29%), Positives = 84/151 (55%), Gaps = 6/151 (3%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSI 61
+++ ++ ++ +++ G ++ + LQ+++ ++V+F Y++
Sbjct: 3 KFTKALLVAGSVAVLAACGSSKNESANGQTFGGYSVQDLQQRY-----NTVYFGFDKYNV 57
Query: 62 RPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA 120
Q+L ++L + IEG+ DE G+ ++ALG RRA+AV ++ A+G+ A
Sbjct: 58 EGEYAQILDAHAAYLNATPATNVRIEGNTDERGTPEYNMALGERRAHAVQSFLTAKGVQA 117
Query: 121 SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
++ SYG+E P+V GHDE AYAKNRRA++
Sbjct: 118 GQISTVSYGEEKPAVLGHDEAAYAKNRRAVL 148
>gi|294506240|ref|YP_003570298.1| Outer membrane protein A [Precursor] [Salinibacter ruber M8]
gi|294342568|emb|CBH23346.1| Outer membrane protein A [Precursor] [Salinibacter ruber M8]
Length = 285
Score = 93.3 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 52/133 (39%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-D 80
D ++ + + E + + FD S ++R Q L+ ++ D
Sbjct: 133 DTKAEELDEELDNADVERVGEGIKVTFDSGILFDFDSSTLRAEARQNLTEFAESMQGFED 192
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
L+ GH D GS + L RRA + + V RG+ SR+ G+ P E
Sbjct: 193 TKILVVGHTDAQGSEEYNQKLSDRRAESATRHLVDRGVDPSRLTSVGRGETEPVASNETE 252
Query: 141 DAYAKNRRAIVFL 153
+ +NRR V +
Sbjct: 253 EGRQQNRRVEVAI 265
>gi|227540121|ref|ZP_03970170.1| OmpA/MotB:Rickettsia surface antigen [Sphingobacterium spiritivorum
ATCC 33300]
gi|300771844|ref|ZP_07081715.1| OmpA family protein [Sphingobacterium spiritivorum ATCC 33861]
gi|227239982|gb|EEI89997.1| OmpA/MotB:Rickettsia surface antigen [Sphingobacterium spiritivorum
ATCC 33300]
gi|300761230|gb|EFK58055.1| OmpA family protein [Sphingobacterium spiritivorum ATCC 33861]
Length = 173
Score = 93.3 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 40/173 (23%), Positives = 65/173 (37%), Gaps = 16/173 (9%)
Query: 1 MQYSTIF--IILSAITMMSI-------------SGIDNLDTKISSPDTVLNESSLQEQFS 45
M+ IF I+ A+T+ S S D + + + S +E
Sbjct: 1 MKQLNIFTLILFCAVTLFSCKQQALTVNPGAVLSKDGTDDGLKNVKEEFKDASRTEEGIK 60
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLR 104
S+ F T+S + LS L L+ + ++GH D G+ ++ L +
Sbjct: 61 FSLSSDFLFPTNSSYLTDKSKGELSKLAKLLKDNSKTKIRVDGHTDATGTPEYNLWLSDK 120
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
RA +V + V GIS SR+ G+ P + NRR V L +
Sbjct: 121 RAVSVKKFLVDSGISESRITTKGIGQAKPVADNKTPEGRQMNRRVEVVLLNQK 173
>gi|153009315|ref|YP_001370530.1| OmpA/MotB domain-containing protein [Ochrobactrum anthropi ATCC
49188]
gi|151561203|gb|ABS14701.1| OmpA/MotB domain protein [Ochrobactrum anthropi ATCC 49188]
Length = 221
Score = 93.3 bits (230), Expect = 1e-17, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 1/129 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHA 89
T ++ + +Q ++ S+ FDT ++ L+++ L K + + GH
Sbjct: 91 QGTGVSVTRNGDQIILNMPSSITFDTDQDQVKSQFYPTLNSVAIVLRKFNQTLVDVYGHT 150
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GS + + AL RRA +V +Y ++GI R V YG P + A+NRR
Sbjct: 151 DSTGSVSHNQALSQRRAASVASYLGSQGIDPRRFAVIGYGASQPVATNATPEGRAQNRRV 210
Query: 150 IVFLKGCRA 158
+ + RA
Sbjct: 211 EIQISPLRA 219
>gi|312115989|ref|YP_004013585.1| peptidoglycan-associated lipoprotein [Rhodomicrobium vannielii ATCC
17100]
gi|311221118|gb|ADP72486.1| peptidoglycan-associated lipoprotein [Rhodomicrobium vannielii ATCC
17100]
Length = 169
Score = 92.9 bits (229), Expect = 1e-17, Method: Composition-based stats.
Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 1/154 (0%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIR 62
++ +F+I +A+++ +++F+ +GD+V + T S +
Sbjct: 9 FAVLFMIAAAVSLSGCDKNAPGAGLGLGAGGGNYPPGSKQEFNGKIGDTVRYLTDSAELS 68
Query: 63 PADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS 121
P Q+L+ W + + IEGHADE G+R +IALG +RA N+ +A+GIS
Sbjct: 69 PDGQQILNAQAVWLRQYTNFPITIEGHADERGTREYNIALGAKRAETTKNFLIAQGISPQ 128
Query: 122 RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
R++ SYGKE P D +++NRR + L+G
Sbjct: 129 RIRTISYGKERPVAVCDDISCWSQNRRTVTVLEG 162
>gi|103485822|ref|YP_615383.1| OmpA/MotB [Sphingopyxis alaskensis RB2256]
gi|98975899|gb|ABF52050.1| OmpA/MotB [Sphingopyxis alaskensis RB2256]
Length = 170
Score = 92.9 bits (229), Expect = 1e-17, Method: Composition-based stats.
Identities = 56/169 (33%), Positives = 81/169 (47%), Gaps = 14/169 (8%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDT------------VLNESSLQEQFSSSV 48
M +++AITM+++ P QE F ++V
Sbjct: 1 MTIRKSTAMIAAITMLAVGACAKKAPDTLPPAPEGAGTDTTTDTGTGVVPGSQEDFVANV 60
Query: 49 G-DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
D +FFD Y++ D L + W +EGHADE G+R+ +IALG RRA
Sbjct: 61 ASDRIFFDFDQYNVDAQDQATLQSQAQWLQRNPAVRVTLEGHADERGTRDYNIALGERRA 120
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
A NY + GI SR+ V SYGKE P+ G +E+A+A+NRRA+ + G
Sbjct: 121 NAAKNYLASLGIDPSRINVISYGKERPAAIGSNEEAWAQNRRAVTVVIG 169
>gi|221196399|ref|ZP_03569446.1| outer membrane protein, OmpA/MotB family [Burkholderia multivorans
CGD2M]
gi|221203071|ref|ZP_03576090.1| outer membrane protein, OmpA/MotB family [Burkholderia multivorans
CGD2]
gi|221177005|gb|EEE09433.1| outer membrane protein, OmpA/MotB family [Burkholderia multivorans
CGD2]
gi|221182953|gb|EEE15353.1| outer membrane protein, OmpA/MotB family [Burkholderia multivorans
CGD2M]
Length = 163
Score = 92.9 bits (229), Expect = 1e-17, Method: Composition-based stats.
Identities = 50/163 (30%), Positives = 80/163 (49%), Gaps = 9/163 (5%)
Query: 1 MQYSTIFIILSAITMMSIS--------GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV 52
M + F +++A+ ++ T S T + L S SV
Sbjct: 1 MSKTNRFAVIAALALLGGCHHAAKTPENTGMAPTPSSEAVTTVTADDLDNPNSPLAKRSV 60
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFN 111
+FD SY+++P D +L ++L H LI+G+ DE G+ ++ALG RR+ AV +
Sbjct: 61 YFDFDSYTVKPEDQSLLQAHANYLRSHPSRHVLIQGNTDERGTSEYNLALGQRRSQAVMS 120
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G+ AS+++ S GKE P GHDE A+A+NRRA + +
Sbjct: 121 ALETLGVPASQLEAVSLGKEKPVALGHDEAAWAQNRRADLVYR 163
>gi|221640526|ref|YP_002526788.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides KD131]
gi|221161307|gb|ACM02287.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides KD131]
Length = 228
Score = 92.9 bits (229), Expect = 1e-17, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 61/148 (41%), Gaps = 1/148 (0%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVL 69
+ + S D + S ++ ++ ++ + ++ + F T S ++RP + L
Sbjct: 80 ILGGAVGSALDRQAADLRNSIGNSQVSVTNTGSELVVTMPQDILFATDSANLRPDLQRDL 139
Query: 70 SNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
+ L + + GH D GS + L +RRA +V + G+ + R+
Sbjct: 140 GAVAQNLLRYPNSTIAVVGHTDSTGSAAYNQDLSMRRAQSVAGVLIGNGVPSYRVSAIGR 199
Query: 129 GKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
G++ P + A+NRR + ++
Sbjct: 200 GEDQPIASNLTPEGRAQNRRVDIIIRPT 227
>gi|206889281|ref|YP_002248656.1| chemotaxis protein MotB [Thermodesulfovibrio yellowstonii DSM
11347]
gi|206741219|gb|ACI20276.1| chemotaxis protein MotB [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 213
Score = 92.9 bits (229), Expect = 1e-17, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 4/125 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ +N S ++ DS+ F + S ++P L+ + L++ IEGH D +
Sbjct: 87 SGINIKSDARGIVITLPDSLLFSSGSAELKPESTDALTRIAEKLKELPGKVAIEGHTDNI 146
Query: 93 GS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
S+ L RA +V ++ + RG+S R + YG+ P ++ AKNRR
Sbjct: 147 PISSSVYKSNWELSAARASSVLHFLLQRGLSPDRFLIAGYGEYKPVATNDTDEGRAKNRR 206
Query: 149 AIVFL 153
+ +
Sbjct: 207 VELII 211
>gi|254719262|ref|ZP_05181073.1| OmpA family protein [Brucella sp. 83/13]
gi|265984261|ref|ZP_06096996.1| OmpA/MotB domain-containing protein [Brucella sp. 83/13]
gi|306838013|ref|ZP_07470871.1| OmpA family protein [Brucella sp. NF 2653]
gi|264662853|gb|EEZ33114.1| OmpA/MotB domain-containing protein [Brucella sp. 83/13]
gi|306406937|gb|EFM63158.1| OmpA family protein [Brucella sp. NF 2653]
Length = 220
Score = 92.9 bits (229), Expect = 1e-17, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 59/138 (42%), Gaps = 1/138 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ + S T ++ + ++ ++ ++ FDT ++ L+++ L K D
Sbjct: 82 QEAELRAQSQGTGVSVTRNGDRIILNMPSNITFDTDQDQVKSQFYPTLNSVAIVLRKFDK 141
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ G D GS + + AL RRA +V +Y ++GI R V YG P
Sbjct: 142 TLVDVYGFTDSTGSASYNQALSQRRAASVASYLDSQGIDPRRFAVIGYGASQPIASNATP 201
Query: 141 DAYAKNRRAIVFLKGCRA 158
+ A+NRR + + R
Sbjct: 202 EGRAQNRRVEIQISPLRG 219
>gi|159025742|emb|CAO02045.1| outer membrane protein A [Bordetella hinzii]
gi|159025744|emb|CAO02046.1| outer membrane protein A [Bordetella hinzii]
gi|159025746|emb|CAO02047.1| outer membrane protein A [Bordetella hinzii]
Length = 177
Score = 92.9 bits (229), Expect = 1e-17, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 48/130 (36%), Gaps = 1/130 (0%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEG 87
E FFD ++P Q+L + D + G
Sbjct: 46 DGVPVAQKEKPAPMAAKVVFNADTFFDFDKSVLKPEGRQLLDQVAQQAGTIDLETIIAVG 105
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
H D +G+ + L RRA +V Y V++GI +R+ G+ P + A+NR
Sbjct: 106 HTDSIGTEAYNQKLSERRAASVKAYLVSKGIDPNRIYTEGKGELQPIATNKTAEGRARNR 165
Query: 148 RAIVFLKGCR 157
R + + G R
Sbjct: 166 RVEIEIVGSR 175
>gi|108761291|ref|YP_633197.1| OmpA domain-containing protein [Myxococcus xanthus DK 1622]
gi|108465171|gb|ABF90356.1| OmpA domain protein [Myxococcus xanthus DK 1622]
Length = 640
Score = 92.9 bits (229), Expect = 1e-17, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 63/143 (44%), Gaps = 8/143 (5%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS------SSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
+D LD + P N ++Q + + ++V+F+ + I ++L + +
Sbjct: 481 VDRLDNCPTEPGPAKNHGCKEKQLAQIGENRIQLLEAVYFENNKDIIIARSNKLLDTVAN 540
Query: 75 WLEKHDC--DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
L H +EGH D G+ + ++ L RRA AV Y V++G++ R+ +G
Sbjct: 541 ILIAHPEVEKVRVEGHTDNRGNPDYNLDLSQRRADAVVRYLVSKGVARERLDAKGFGPTQ 600
Query: 133 PSVYGHDEDAYAKNRRAIVFLKG 155
P + AKNRR + G
Sbjct: 601 PIADNNTTQGRAKNRRVEFKIVG 623
>gi|90426219|ref|YP_534589.1| OmpA/MotB [Rhodopseudomonas palustris BisB18]
gi|90108233|gb|ABD90270.1| OmpA/MotB [Rhodopseudomonas palustris BisB18]
Length = 166
Score = 92.9 bits (229), Expect = 1e-17, Method: Composition-based stats.
Identities = 53/152 (34%), Positives = 80/152 (52%), Gaps = 1/152 (0%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIR 62
+ ++ A++M + + + L Q+ F +VGD VFF++ +
Sbjct: 11 FKLAAVLAVALSMGACANKNPLGGGADGSLAGAATPGSQQDFVVNVGDRVFFESDQTDLS 70
Query: 63 PADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS 121
P I L WL+ ++ F IEGHADE G+R +IALG RRA +V Y +RGI +S
Sbjct: 71 PQAIATLDKQAQWLQSYNRYSFTIEGHADERGTREYNIALGARRAQSVRTYLTSRGIDSS 130
Query: 122 RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RM+ SYGKE P +D +++NRRA+ L
Sbjct: 131 RMRTISYGKERPVAVCNDISCWSQNRRAVTVL 162
>gi|51702435|gb|AAU08790.1| OmpA [Bordetella ansorpii]
Length = 178
Score = 92.9 bits (229), Expect = 1e-17, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 60/144 (41%), Gaps = 3/144 (2%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
I G D + ++ + FFD +++P Q+L + S
Sbjct: 36 ATGIPGCDGVPVAQAATPRAPAPQPTASKVV--FNADTFFDFDKSTLKPEGRQLLDQVAS 93
Query: 75 WLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
+ + + GH D +GS + L RRA +V +Y V++GI A+R+ G++ P
Sbjct: 94 QVNTINLETLIAVGHTDSIGSDAYNQKLSERRAASVKSYLVSKGIDANRIYTEGKGEKQP 153
Query: 134 SVYGHDEDAYAKNRRAIVFLKGCR 157
+ AKNRR + + G R
Sbjct: 154 VASNSTREGRAKNRRVEIEIVGTR 177
>gi|163755660|ref|ZP_02162779.1| OmpA/MotB [Kordia algicida OT-1]
gi|161324573|gb|EDP95903.1| OmpA/MotB [Kordia algicida OT-1]
Length = 635
Score = 92.9 bits (229), Expect = 1e-17, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 8/140 (5%)
Query: 22 DNLDTKISSPDTVLN-ESSLQEQFSSSVGD------SVFFDTSSYSIRPADIQVLSNLGS 74
DN D + T+ + + E ++ D V+FD S + ++L N+ +
Sbjct: 491 DNKDKCPTVVGTIEGCPAEVVETEVVTIPDPAVGERKVYFDFDSSKLDKNAKEILDNIAA 550
Query: 75 WLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
L+ + I GHAD G+ + L + RA + NY ++ +S S + +T G+ P
Sbjct: 551 NLKNDAGYNISIIGHADSRGTDRYNDKLSIERAQVIKNYLDSKKLSNSNITITGKGESAP 610
Query: 134 SVYGHDEDAYAKNRRAIVFL 153
+ AKNRR + +
Sbjct: 611 IAPNTTPEGRAKNRRVELII 630
>gi|307294752|ref|ZP_07574594.1| peptidoglycan-associated lipoprotein [Sphingobium chlorophenolicum
L-1]
gi|306879226|gb|EFN10444.1| peptidoglycan-associated lipoprotein [Sphingobium chlorophenolicum
L-1]
Length = 169
Score = 92.6 bits (228), Expect = 1e-17, Method: Composition-based stats.
Identities = 57/165 (34%), Positives = 80/165 (48%), Gaps = 13/165 (7%)
Query: 1 MQYSTIFIILSAITMMSISG-----------IDNLDTKISSPDTVLNESSLQEQFSSSVG 49
M+ S ++ +AI ++ D QE F +SV
Sbjct: 1 MKISRTLLVATAIVALAACSKKAPKELPPPPADTSTQTTGPATPSGPVKGSQEDFVASVS 60
Query: 50 -DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
D + FDT Y + D Q+L + +W + + IEGHADE G+R+ +IALG RRA
Sbjct: 61 SDRILFDTDQYDVDAQDQQILQSQAAWLQQNPNVRVTIEGHADERGTRDYNIALGERRAN 120
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
A NY + GI A R+ SYGKE P+ G DE A+A+NRRA+
Sbjct: 121 AAKNYLASLGIDAGRITTVSYGKERPAALGSDEAAWAQNRRAVTV 165
>gi|194290514|ref|YP_002006421.1| outer membrane lipoprotein [Cupriavidus taiwanensis LMG 19424]
gi|193224349|emb|CAQ70360.1| putative outer membrane lipoprotein [Cupriavidus taiwanensis LMG
19424]
Length = 212
Score = 92.6 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 1/134 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFL 84
K ++ ++ V FDT S +I+P+ VL + + D
Sbjct: 79 NKDTAGTGTQITEQPDGSLKVNIPSQVTFDTDSATIKPSFRSVLDQVAQTLSQHQDVSAN 138
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+ GH D G+ N ++ L RRA +V Y RG++ +R+ G+ P E A
Sbjct: 139 VVGHTDSTGNPNYNMQLSQRRAQSVAGYLGDRGVARNRLSAEGRGQSQPVADNGTEAGRA 198
Query: 145 KNRRAIVFLKGCRA 158
+NRR +FLK +
Sbjct: 199 QNRRVEIFLKPIQG 212
>gi|113868899|ref|YP_727388.1| outer membrane protein peptidoglycan-associated(lipo)proteins
[Ralstonia eutropha H16]
gi|113527675|emb|CAJ94020.1| outer membrane protein peptidoglycan-associated(lipo)proteins
[Ralstonia eutropha H16]
Length = 212
Score = 92.6 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 1/134 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFL 84
K ++ ++ V FDT S +I+P+ VL + + D
Sbjct: 79 NKDTAGTGTQITEQPDGTLKVNIPSQVTFDTDSATIKPSFRSVLDQVAQTLGQHQDVSAN 138
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+ GH D G+ N ++ L RRA +V Y RG++ +R+ G+ P E A
Sbjct: 139 VVGHTDSTGNPNYNMQLSQRRAQSVAGYLGDRGVARNRLTAEGRGQSQPVADNGTEAGRA 198
Query: 145 KNRRAIVFLKGCRA 158
+NRR +FLK +
Sbjct: 199 QNRRVEIFLKPIQG 212
>gi|32265934|ref|NP_859966.1| hypothetical protein HH0435 [Helicobacter hepaticus ATCC 51449]
gi|4809140|gb|AAD30109.1|AF134212_1 membrane-associated protein map18 [Helicobacter hepaticus]
gi|32261983|gb|AAP77032.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
Length = 153
Score = 92.6 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 43/153 (28%), Positives = 64/153 (41%), Gaps = 2/153 (1%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ +L+A+ + S D D+ N L V V FD Y
Sbjct: 1 MKKYIAMGVLAALISVGCSEPDAADSGSGKAAGGDNFVDLAGGAGGYVK--VLFDFDKYD 58
Query: 61 IRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA 120
IR + + L+ ++EGH D GS + ALG +RA AV N RG++A
Sbjct: 59 IRSDMEDRVEKSAAALKSTGAKVVLEGHTDSYGSDAYNYALGTKRANAVKNALTTRGVNA 118
Query: 121 SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S++K SYG+ P+ + +NRR L
Sbjct: 119 SQIKTVSYGESKPTCTSDTPECNQENRRVEFKL 151
>gi|325278144|ref|ZP_08143653.1| OmpA/MotB domain protein [Pseudomonas sp. TJI-51]
gi|324096719|gb|EGB95056.1| OmpA/MotB domain protein [Pseudomonas sp. TJI-51]
Length = 263
Score = 92.6 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 36/145 (24%), Positives = 62/145 (42%), Gaps = 2/145 (1%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
A + + +D D +I+ LN + GD V FD + ++ ++
Sbjct: 105 AAAQRAQAKLDARDAQIAKLQNSLNAKQTDRGTLVTFGD-VLFDFNKAELKSNAYPNITK 163
Query: 72 LGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
L + E + ++EG+ D +GS + + +L RRA +V V G+ +R+ YGK
Sbjct: 164 LAQFLQENPERKVIVEGYTDSVGSASYNQSLSERRANSVRMALVRAGVDPARIVAQGYGK 223
Query: 131 EMPSVYGHDEDAYAKNRRAIVFLKG 155
E P A+NRR V +
Sbjct: 224 EYPVADNSSNSGRAQNRRVEVTISN 248
>gi|124514812|gb|EAY56324.1| putative OmpA family protein [Leptospirillum rubarum]
Length = 265
Score = 92.6 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 53/123 (43%), Gaps = 2/123 (1%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSR 95
++G+ V FD + ++P ++ + L +++ +IEG+ D G+
Sbjct: 138 AKETNRGLVLTLGN-VLFDLNKADLKPGGMRTIKKLAEFMQSDPKRNVMIEGYTDSTGTA 196
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+ L L+RA +V + V GI+ R+ YG + P D +NRR + +
Sbjct: 197 AYNEKLSLKRAESVRDALVNDGINPQRIVTKGYGPKYPIASNKTADGRQQNRRVEIVISD 256
Query: 156 CRA 158
+
Sbjct: 257 EKG 259
>gi|294852539|ref|ZP_06793212.1| outer membrane protein [Brucella sp. NVSL 07-0026]
gi|294821128|gb|EFG38127.1| outer membrane protein [Brucella sp. NVSL 07-0026]
Length = 258
Score = 92.6 bits (228), Expect = 2e-17, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 58/138 (42%), Gaps = 1/138 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ + T ++ + ++ ++ ++ FDT ++ L+++ L K D
Sbjct: 94 QEAELRAQLQGTGVSVTRNGDRIILNMPSNITFDTDQDQVKSQFYPTLNSVAIVLRKFDK 153
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ G D GS + + AL RRA +V +Y ++GI R V YG P
Sbjct: 154 TLVDVYGFTDSTGSASYNQALSQRRAASVASYLDSQGIDPRRFAVIGYGASQPIASNATP 213
Query: 141 DAYAKNRRAIVFLKGCRA 158
+ A+NRR + + R
Sbjct: 214 EGRAQNRRVEIQISPLRG 231
>gi|159025748|emb|CAO02048.1| outer membrane protein A [Bordetella holmesii]
Length = 163
Score = 92.2 bits (227), Expect = 2e-17, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 49/129 (37%), Gaps = 1/129 (0%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEG 87
E FFD ++P Q+L + + D + G
Sbjct: 35 DGVPVAQKEKPAPMAAKVVFNADTFFDFDKSVLKPEGRQLLDQVAQQAKAIDLETIIAVG 94
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
H D +G+ ++ L RRA +V Y V++GI +R+ G+ P + A+NR
Sbjct: 95 HTDSIGTEAYNLKLSDRRAASVKAYLVSKGIDPNRIYTEGKGEAQPIATNKTAEGRARNR 154
Query: 148 RAIVFLKGC 156
R + + G
Sbjct: 155 RVEIEIVGS 163
>gi|294013407|ref|YP_003546867.1| peptidoglycan-associated lipoprotein [Sphingobium japonicum UT26S]
gi|292676737|dbj|BAI98255.1| peptidoglycan-associated lipoprotein [Sphingobium japonicum UT26S]
Length = 170
Score = 92.2 bits (227), Expect = 2e-17, Method: Composition-based stats.
Identities = 57/166 (34%), Positives = 80/166 (48%), Gaps = 14/166 (8%)
Query: 1 MQYSTIFIILSAITMMSISGI------------DNLDTKISSPDTVLNESSLQEQFSSSV 48
M+ S ++ +AI ++ D QE F +SV
Sbjct: 1 MKLSRPLLMATAIVALAACSKKPPQELPPAPGGDASAQTGGPATPSGPVKGSQEDFVASV 60
Query: 49 G-DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
D + FDT Y + D Q+L + +W + + IEGHADE G+R+ +IALG RRA
Sbjct: 61 SSDRILFDTDQYDVDAQDQQILQSQAAWLQQNPNVRVTIEGHADERGTRDYNIALGERRA 120
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
A NY + GI A R+ SYGKE P+ G DE A+A+NRRA+
Sbjct: 121 NAAKNYLASLGIDAGRITTVSYGKERPAALGSDEAAWAQNRRAVTV 166
>gi|253582159|ref|ZP_04859382.1| outer membrane protein OmpF [Fusobacterium varium ATCC 27725]
gi|251835698|gb|EES64236.1| outer membrane protein OmpF [Fusobacterium varium ATCC 27725]
Length = 186
Score = 92.2 bits (227), Expect = 2e-17, Method: Composition-based stats.
Identities = 40/185 (21%), Positives = 76/185 (41%), Gaps = 30/185 (16%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISSP-------------DTVLNESSLQE------- 42
+ ++LSA ++ ++G ++D + D +++ +L+E
Sbjct: 1 MKKVLLMLSASLIVILTGCSSVDKQPLKELVIEETENEFIMEDIDVSKKTLEEIIVFNEK 60
Query: 43 ---------QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADEL 92
S+ + V FD + Y ++ L+ L E D I+G+ D +
Sbjct: 61 GVTIRREGNNLVLSMPELVLFDFNKYEVKNKVKGSLNALAKALEENPDIRIKIDGYTDFI 120
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
GS ++ L ++RA A+ +Y RG+ S + + YGK+ P E AKNRR
Sbjct: 121 GSEGYNLELSVKRANAIKDYLTNRGVKPSNISIEGYGKQNPIASNQTETGRAKNRRVEFI 180
Query: 153 LKGCR 157
+ +
Sbjct: 181 ISRDK 185
>gi|251793057|ref|YP_003007783.1| peptidoglycan-associated lipoprotein [Aggregatibacter aphrophilus
NJ8700]
gi|247534450|gb|ACS97696.1| peptidoglycan-associated lipoprotein [Aggregatibacter aphrophilus
NJ8700]
Length = 154
Score = 92.2 bits (227), Expect = 2e-17, Method: Composition-based stats.
Identities = 43/151 (28%), Positives = 77/151 (50%), Gaps = 2/151 (1%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSI 61
+ + ++ ++ +++ G N + + + ++V F Y I
Sbjct: 3 KLTKALLVAGSVAVLAACGSSNKTENGNGSNGQTFGGYSVQDLQQRY-NTVLFGFDKYDI 61
Query: 62 RPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA 120
+ +Q+L ++L +EGH DE G+ ++ALG RRA+AV NY ++G+ A
Sbjct: 62 QGEYVQILDAHAAYLNATPATSVRVEGHTDERGTPEYNMALGERRAHAVQNYLTSKGVQA 121
Query: 121 SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
++ SYG+E P+ GHDE AY+KNRRA++
Sbjct: 122 GQISTVSYGEEKPAELGHDEAAYSKNRRAVL 152
>gi|78059690|ref|YP_366265.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383]
gi|77964240|gb|ABB05621.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
Length = 167
Score = 92.2 bits (227), Expect = 2e-17, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 13/167 (7%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSP------------DTVLNESSLQEQFSSSV 48
M+ T + +L A+ + + L S
Sbjct: 1 MKSLTRYAVLLALVLFGGCHSATKTPSTAGMMNQGTANGQAIGTPSTMADELNNPNSPLA 60
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAY 107
S++FD SY ++P +L +L H LI+G+ DE G+ ++ALG RR+
Sbjct: 61 KRSIYFDFDSYEVKPEYQSLLQAHADYLRLHPGRHILIQGNTDERGTSEYNLALGERRSQ 120
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
AV G+ ++++ S+GKE P GHDE ++A+NRRA + +
Sbjct: 121 AVLRTLETLGVPDAQIEAVSFGKEKPVALGHDEASWAQNRRADIVYR 167
>gi|161520749|ref|YP_001584176.1| peptidoglycan-associated lipoprotein [Burkholderia multivorans ATCC
17616]
gi|189353068|ref|YP_001948695.1| peptidoglycan-associated lipoprotein [Burkholderia multivorans ATCC
17616]
gi|160344799|gb|ABX17884.1| peptidoglycan-associated lipoprotein [Burkholderia multivorans ATCC
17616]
gi|189337090|dbj|BAG46159.1| peptidoglycan-associated lipoprotein [Burkholderia multivorans ATCC
17616]
Length = 163
Score = 92.2 bits (227), Expect = 2e-17, Method: Composition-based stats.
Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 9/163 (5%)
Query: 1 MQYSTIFIILSAITMMSIS--------GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV 52
M + F +++A+ ++ S T + L S SV
Sbjct: 1 MSKTNRFAVIAALALLGGCHHAAKTPENTGMAPAPSSEAVTTVTADDLDNPNSPLAKRSV 60
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFN 111
+FD SY+++P D +L ++L H LI+G+ DE G+ ++ALG RR+ AV +
Sbjct: 61 YFDFDSYTVKPEDQSLLQAHANYLRSHPSRHVLIQGNTDERGTSEYNLALGQRRSQAVMS 120
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G+ AS+++ S GKE P GHDE A+A+NRRA + +
Sbjct: 121 ALETLGVPASQLEAVSLGKEKPVALGHDEAAWAQNRRADLVYR 163
>gi|332185595|ref|ZP_08387343.1| rickettsia 17 kDa surface antigen family protein [Sphingomonas sp.
S17]
gi|332014573|gb|EGI56630.1| rickettsia 17 kDa surface antigen family protein [Sphingomonas sp.
S17]
Length = 225
Score = 92.2 bits (227), Expect = 2e-17, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 55/137 (40%), Gaps = 1/137 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
D + + T + + ++ + F S +++P Q L + +
Sbjct: 84 QERDLRARTAGTDVQVVRQGDDLLLNLPSGITFAYDSSTVQPQFRQTLDQVADILSQYKQ 143
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ GH D GS + + AL RRA AV +Y +RG+ +R+ +GK P +
Sbjct: 144 TYIDVYGHTDSTGSDSYNQALSERRAVAVADYLASRGVQPARIGTRGFGKSQPIASNDTD 203
Query: 141 DAYAKNRRAIVFLKGCR 157
A NRR + + R
Sbjct: 204 AGRAANRRVEIKIVPIR 220
>gi|332666433|ref|YP_004449221.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332335247|gb|AEE52348.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 958
Score = 92.2 bits (227), Expect = 2e-17, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 41/101 (40%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
V F T SY I P L +++++ I+GH D S + L RA AV
Sbjct: 853 RDVLFATGSYEILPEAHTYLIQWAKFIQRNKLKIEIQGHTDNTSSTEFNQVLSENRAQAV 912
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
+ + A + +G+ P E+ AKNRR +
Sbjct: 913 RQFLIENNCIAENLSTRGFGESKPEASNATEEGRAKNRRVV 953
>gi|146308382|ref|YP_001188847.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp]
gi|145576583|gb|ABP86115.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp]
Length = 261
Score = 92.2 bits (227), Expect = 2e-17, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 65/140 (46%), Gaps = 2/140 (1%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+ + +D D +I LN + + GD V FD + ++ + + ++ L +L
Sbjct: 110 AKALLDARDAQIRKLQDSLNAKQTERGTLVTFGD-VLFDFNKAELKSSALPNVTQLARFL 168
Query: 77 EKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+++ ++EG+ D +GS + + L RRA +V + G+ +R+ YGKE P
Sbjct: 169 QENPERQVIVEGYTDSVGSASYNQGLSERRAESVRRALIRAGVEPTRIVAQGYGKEYPVA 228
Query: 136 YGHDEDAYAKNRRAIVFLKG 155
+ A+NRR V +
Sbjct: 229 DNSSDSGRAQNRRVEVTISN 248
>gi|209886401|ref|YP_002290258.1| OmpA/MotB domain protein [Oligotropha carboxidovorans OM5]
gi|209874597|gb|ACI94393.1| OmpA/MotB domain protein [Oligotropha carboxidovorans OM5]
Length = 160
Score = 92.2 bits (227), Expect = 2e-17, Method: Composition-based stats.
Identities = 51/150 (34%), Positives = 73/150 (48%), Gaps = 2/150 (1%)
Query: 5 TIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPA 64
+ +L + N D S Q+ F +VGD VFF++ +
Sbjct: 8 KLAAVLVVALSVGACANKNGDLNGSGMAGAAT-PGSQQDFVVNVGDRVFFESDQTELSQQ 66
Query: 65 DIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
I L W + F IEGHADE G+R +IALG +RA +V N+ +RGI+ SRM
Sbjct: 67 AINTLEKQAQWLQQYPRYTFTIEGHADERGTREYNIALGAKRAQSVRNFLASRGINPSRM 126
Query: 124 KVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ SYGKE P +D +++NRRA+ L
Sbjct: 127 RTISYGKERPVAVCNDISCWSQNRRAVTVL 156
>gi|148559799|ref|YP_001259124.1| OmpA family protein [Brucella ovis ATCC 25840]
gi|148371056|gb|ABQ61035.1| OmpA family protein [Brucella ovis ATCC 25840]
Length = 243
Score = 92.2 bits (227), Expect = 2e-17, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 58/138 (42%), Gaps = 1/138 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ + T ++ + ++ ++ ++ FDT ++ L+++ L K D
Sbjct: 105 QEAELRAQLQGTGVSVTRNGDRIILNMPSNITFDTDQDQVKSQFYPTLNSVAIVLRKFDK 164
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ G D GS + + AL RRA +V +Y ++GI R V YG P
Sbjct: 165 TLVDVYGFTDSTGSASYNQALSQRRAASVASYLDSQGIDPRRFAVIGYGASQPIASNATP 224
Query: 141 DAYAKNRRAIVFLKGCRA 158
+ A+NRR + + R
Sbjct: 225 EGRAQNRRVEIQISPLRG 242
>gi|206602390|gb|EDZ38871.1| Putative OmpA family protein [Leptospirillum sp. Group II '5-way
CG']
Length = 265
Score = 92.2 bits (227), Expect = 2e-17, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 53/123 (43%), Gaps = 2/123 (1%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSR 95
++G+ V FD + ++P ++ + L +++ +IEG+ D G+
Sbjct: 138 AKETNRGLVLTLGN-VLFDLNKADLKPGGMRTIKKLAEFMQSDPKRNVMIEGYTDSTGTA 196
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+ L L+RA +V + V GI+ R+ YG + P D +NRR + +
Sbjct: 197 AYNEKLSLKRAESVRDALVNDGINPQRIVTKGYGPKYPIASNKTADGRQQNRRVEIVISD 256
Query: 156 CRA 158
+
Sbjct: 257 EKG 259
>gi|260431107|ref|ZP_05785078.1| peptidoglycan-associated lipoprotein [Silicibacter lacuscaerulensis
ITI-1157]
gi|260414935|gb|EEX08194.1| peptidoglycan-associated lipoprotein [Silicibacter lacuscaerulensis
ITI-1157]
Length = 167
Score = 92.2 bits (227), Expect = 2e-17, Method: Composition-based stats.
Identities = 49/166 (29%), Positives = 76/166 (45%), Gaps = 8/166 (4%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISS-------PDTVLNESSLQEQFSSSVGDSVF 53
M + L A+ +++ ++ + N+ F +VGD V
Sbjct: 1 MNVLSKIAALGALALVTACSNNDPSALGGAGGGSGSIVPGSPNDPRSPAYFQQAVGDRVL 60
Query: 54 FDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F ++ +L WL D IEGHADE G+R ++ALG RRA A +
Sbjct: 61 FAVDQSTLSSEAQSILQGQADWLLANTDYTATIEGHADEQGTREYNLALGARRANAAREF 120
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
++RG++ +R++ SYGKE P E+ Y+KNRRA+ L G A
Sbjct: 121 LISRGVAGNRLQTVSYGKERPIEICSTEECYSKNRRAVTVLTGSTA 166
>gi|104780466|ref|YP_606964.1| OmpA family outer membrane protein [Pseudomonas entomophila L48]
gi|95109453|emb|CAK14154.1| putative outer membrane protein; OmpA family [Pseudomonas
entomophila L48]
Length = 262
Score = 92.2 bits (227), Expect = 2e-17, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 2/145 (1%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
A + + +D D +I LN + GD V FD + +++ + ++
Sbjct: 105 AAAQRAQAKLDARDAQIKKLQDSLNAKQTDRGTLVTFGD-VLFDFNKANLKGSAYPNITK 163
Query: 72 LGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
L + E + +IEG+ D +GS N + L RRA +V V G+ +R+ YGK
Sbjct: 164 LAQFLQENPERKVIIEGYTDSVGSANYNQTLSERRANSVRMALVRAGVDPARIVAQGYGK 223
Query: 131 EMPSVYGHDEDAYAKNRRAIVFLKG 155
E P A+NRR V +
Sbjct: 224 EYPVADNTSNSGRAQNRRVEVTISN 248
>gi|121998797|ref|YP_001003584.1| OmpA/MotB domain-containing protein [Halorhodospira halophila SL1]
gi|121590202|gb|ABM62782.1| OmpA/MotB domain protein [Halorhodospira halophila SL1]
Length = 242
Score = 91.8 bits (226), Expect = 2e-17, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 51/138 (36%), Gaps = 4/138 (2%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
D ++ + + +E + + D+V F+T ++ + L +
Sbjct: 91 EADPVEVPAELEEAGIQAVGEEETLTFRLDDAVLFETGRAELQAEGQAAIDELIPIFQAT 150
Query: 80 DCDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+EGH D + S+ L RA AV Y +G+ RM+ YG P
Sbjct: 151 GVRLSVEGHTDNIPIATGQFPSNWELSSARASAVLRYLEEQGLDPRRMRAIGYGDIRPIA 210
Query: 136 YGHDEDAYAKNRRAIVFL 153
+ A+NRR + L
Sbjct: 211 DNETAEGRAENRRVEITL 228
>gi|237815623|ref|ZP_04594620.1| OmpA family protein [Brucella abortus str. 2308 A]
gi|237788921|gb|EEP63132.1| OmpA family protein [Brucella abortus str. 2308 A]
Length = 243
Score = 91.8 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 59/138 (42%), Gaps = 1/138 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ + T ++ + ++ ++ ++ FDT ++ L+++ L K D
Sbjct: 105 QEAELRAQLQGTGVSVTRNGDRIILNMPSNITFDTDQDQVKSQFYPTLNSVAIVLRKFDK 164
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ G D GS + + AL RRA +V +Y ++GI R V YG P V
Sbjct: 165 TLVDVYGFTDSTGSASYNQALSQRRAASVASYLDSQGIDPRRFSVIGYGASQPIVSNATP 224
Query: 141 DAYAKNRRAIVFLKGCRA 158
+ A+NRR + + R
Sbjct: 225 EGRAQNRRVEIQISPLRG 242
>gi|221210024|ref|ZP_03583005.1| outer membrane protein, OmpA/MotB family [Burkholderia multivorans
CGD1]
gi|221170712|gb|EEE03178.1| outer membrane protein, OmpA/MotB family [Burkholderia multivorans
CGD1]
Length = 163
Score = 91.8 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 9/163 (5%)
Query: 1 MQYSTIFIILSAITMMSIS--------GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV 52
M + F +++A+ ++ T S T + L S SV
Sbjct: 1 MSKTNRFAVIAALALLGGCHQAAKTPENTGMAPTPSSEAVTTVTADDLDNPNSPLAKRSV 60
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFN 111
+FD SY+++P D +L ++L H LI+G+ DE G+ ++ALG RR+ AV +
Sbjct: 61 YFDFDSYTVKPEDQSLLQAHANYLRSHPSRHVLIQGNTDERGTSEYNLALGQRRSQAVMS 120
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G+SAS+++ S GKE P GHDE A+A+NRRA + +
Sbjct: 121 ALETLGVSASQLEAVSLGKEKPVALGHDEAAWAQNRRADLVYR 163
>gi|21243867|ref|NP_643449.1| outer membrane protein P6 [Xanthomonas axonopodis pv. citri str.
306]
gi|21109468|gb|AAM37985.1| outer membrane protein P6 precursor [Xanthomonas axonopodis pv.
citri str. 306]
Length = 181
Score = 91.8 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 16/168 (9%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQ---------------EQFS 45
M ST +++S +++ ++G + P T S + +
Sbjct: 10 MNKSTRVLLVSLLSVAVLAGCSKKVKETPPPATDTTAGSSVPTGPSTSGLYGPGDLDADA 69
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLR 104
V+FD S++P +++ +L ++G+ADE GSR ++ LG R
Sbjct: 70 CLRQRVVYFDLDQDSLKPEFQAIMACHAKYLRDRPSSRITLQGNADERGSREYNMGLGER 129
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
R AV + A G SAS++ V SYG+E P +E +++NRR +
Sbjct: 130 RGNAVSSSLQAAGGSASQLTVVSYGEERPVCTESNESCWSQNRRVEIV 177
>gi|120613225|ref|YP_972903.1| OmpA/MotB domain-containing protein [Acidovorax citrulli AAC00-1]
gi|120591689|gb|ABM35129.1| OmpA/MotB domain protein [Acidovorax citrulli AAC00-1]
Length = 296
Score = 91.8 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 53/126 (42%), Gaps = 2/126 (1%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELG 93
+ + ++GD V F + + L L ++ + D +IEGH D +G
Sbjct: 168 IEAQQTERGLLVTLGD-VLFAFNKAELSAQAGPRLDKLANFLRQFPDRKLIIEGHTDSVG 226
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +L RRA AV + V RG++ R+ YGK P + A NRR + +
Sbjct: 227 GDAYNQSLSERRAQAVQSALVQRGVAPDRITARGYGKTYPVADNSSPEGRAMNRRVEIVI 286
Query: 154 KGCRAN 159
+ N
Sbjct: 287 ADEKGN 292
>gi|58581292|ref|YP_200308.1| outer membrane protein P6 precursor [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|58425886|gb|AAW74923.1| outer membrane protein P6 precursor [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 181
Score = 91.8 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 16/168 (9%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQ---------------EQFS 45
M ST +++S +++ ++G + P T S + +
Sbjct: 10 MNKSTRVLLVSLLSVAVLAGCSKKVKETPPPATNTTAGSSVPTGPSTSGLYGPGDLDTDA 69
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLR 104
V+FD S++P +++ +L ++G+ADE GSR ++ LG R
Sbjct: 70 CLRQRVVYFDLDQDSLKPEFQAIMACHAKYLRDRPSSRITLQGNADERGSREYNMGLGER 129
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
R AV + A G SAS++ V SYG+E P +E +++NRR +
Sbjct: 130 RGNAVSSSLQAAGGSASQLTVVSYGEERPVCTESNESCWSQNRRVEIV 177
>gi|227356660|ref|ZP_03841046.1| peptidoglycan-associated lipoprotein [Proteus mirabilis ATCC 29906]
gi|227163168|gb|EEI48099.1| peptidoglycan-associated lipoprotein [Proteus mirabilis ATCC 29906]
Length = 176
Score = 91.8 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 54/164 (32%), Positives = 81/164 (49%), Gaps = 12/164 (7%)
Query: 1 MQYSTIF----IILSAITMMSISG------IDNLDTKISSPDTVLNESSLQEQFSSSVG- 49
MQ + +F + L + + + S D + + E ++Q
Sbjct: 12 MQLNKVFKGLMLALPLVAVAACSSNKNDDQTDTSNNVPVTEQGPTAEELARQQLEQLKQT 71
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYA 108
+ V+F Y + Q+L ++L + IEGHADE G+ +IALG RRA A
Sbjct: 72 NIVYFGFDKYDVTSEYAQLLDAHAAFLRANPSVRITIEGHADERGTPEYNIALGERRANA 131
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
V Y +G+SA ++ + SYGKE P+V GHDE AYAKNRRA++
Sbjct: 132 VKMYLQGKGVSADQLSIVSYGKEKPAVLGHDEAAYAKNRRAVLV 175
>gi|225627675|ref|ZP_03785712.1| OmpA family protein [Brucella ceti str. Cudo]
gi|225617680|gb|EEH14725.1| OmpA family protein [Brucella ceti str. Cudo]
Length = 243
Score = 91.8 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 58/138 (42%), Gaps = 1/138 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ + T ++ + ++ ++ ++ FDT ++ L+++ L K D
Sbjct: 105 QEAELRAQLQGTGVSVTRNGDRIILNMPSNITFDTDQDQVKSQFYPTLNSVAIVLRKFDK 164
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ G D GS + + AL RRA +V +Y ++GI R V YG P
Sbjct: 165 TLVDVYGFTDSTGSASYNQALSQRRAASVASYLDSQGIDPRRFAVIGYGASQPIASNATP 224
Query: 141 DAYAKNRRAIVFLKGCRA 158
+ A+NRR + + R
Sbjct: 225 EGRAQNRRVEIQISPLRG 242
>gi|295132150|ref|YP_003582826.1| thrombospondin repeat-containing OmpA/MotB family outer
hypothetical protein [Zunongwangia profunda SM-A87]
gi|294980165|gb|ADF50630.1| thrombospondin repeat-containing OmpA/MotB family outer membrane
protein [Zunongwangia profunda SM-A87]
Length = 470
Score = 91.8 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 6/138 (4%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSS-----SVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
D D TV N + ++V FD + +IR + L+++ +
Sbjct: 322 DPEDDCPEVAGTVANNGCPEPTVEVINELNEYSNTVLFDFNKATIRSESEKALNSIIEIM 381
Query: 77 EKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
E++ I GH D +GS ++ L RA +V + V GI A+R+ YG+ P
Sbjct: 382 EEYPNTVFHIGGHTDSVGSDEYNLKLSKERAASVRQFLVDGGIPANRLTSEGYGESRPIA 441
Query: 136 YGHDEDAYAKNRRAIVFL 153
E +NRR + L
Sbjct: 442 TNSTEAGRQENRRVEISL 459
>gi|94311700|ref|YP_584910.1| OmpA/MotB [Cupriavidus metallidurans CH34]
gi|93355552|gb|ABF09641.1| outer membrane protein, OmpA/MotB family(modular protein)
[Cupriavidus metallidurans CH34]
Length = 294
Score = 91.8 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 1/130 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFL 84
K ++ ++ V FDT S +I+P+ VL + + D
Sbjct: 161 NKDTAGTGTQITEQPDGSLKVNIPSQVTFDTDSSTIKPSFRNVLDQVAQTLAQHQDVSAN 220
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+ GH D G+ ++ L RRA +V Y RG++ +R+ G+ P E A
Sbjct: 221 VVGHTDSTGNPQYNMQLSQRRAQSVAGYLGDRGVARTRLSAEGRGQTQPVADNSTEAGRA 280
Query: 145 KNRRAIVFLK 154
+NRR +FLK
Sbjct: 281 QNRRVEIFLK 290
>gi|77464614|ref|YP_354118.1| OmpA family protein [Rhodobacter sphaeroides 2.4.1]
gi|126463454|ref|YP_001044568.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
17029]
gi|332559507|ref|ZP_08413829.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides WS8N]
gi|77389032|gb|ABA80217.1| OmpA family protein [Rhodobacter sphaeroides 2.4.1]
gi|126105118|gb|ABN77796.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17029]
gi|332277219|gb|EGJ22534.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides WS8N]
Length = 228
Score = 91.8 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 61/148 (41%), Gaps = 1/148 (0%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVL 69
+ + S D + S ++ ++ ++ + ++ + F T S ++RP + L
Sbjct: 80 ILGGAVGSALDRQAADLRNSIGNSQVSVTNTGSELVVTMPQDILFATDSANLRPDLQRDL 139
Query: 70 SNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
+ L + + GH D G+ + L +RRA +V + G+ + R+
Sbjct: 140 GAVAQNLLRYPNSTIAVVGHTDSTGAAAYNQDLSMRRAQSVAGVLIGNGVPSYRVSAIGR 199
Query: 129 GKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
G++ P + A+NRR + ++
Sbjct: 200 GEDQPIASNLTPEGRAQNRRVDIIIRPT 227
>gi|260912914|ref|ZP_05919399.1| peptidoglycan-associated lipoprotein [Pasteurella dagmatis ATCC
43325]
gi|260632904|gb|EEX51070.1| peptidoglycan-associated lipoprotein [Pasteurella dagmatis ATCC
43325]
Length = 151
Score = 91.8 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 45/152 (29%), Positives = 82/152 (53%), Gaps = 7/152 (4%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKISSPD-TVLNESSLQEQFSSSVGDSVFFDTSSYS 60
+ + + ++ ++ +++ G + + + LQ+++ ++V+F Y+
Sbjct: 3 KLTKVLLVAGSVAVLAACGSSKKEESAAGQTFGGYSVQDLQQRY-----NTVYFGFDKYN 57
Query: 61 IRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
I +Q+L + ++EG+ DE G+ +IALG RRA AV NY A+G+
Sbjct: 58 IEGEYVQILDAHAAYLSATPATKVVVEGNTDERGTPEYNIALGQRRADAVQNYLSAKGVQ 117
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
A ++ SYG+E P+V GHDE AY+KNRRA++
Sbjct: 118 AGQVSTVSYGEEKPAVLGHDEAAYSKNRRAVL 149
>gi|62290115|ref|YP_221908.1| OmpA family protein [Brucella abortus bv. 1 str. 9-941]
gi|82700038|ref|YP_414612.1| outer membrane protein MotY [Brucella melitensis biovar Abortus
2308]
gi|189024353|ref|YP_001935121.1| outer membrane protein [Brucella abortus S19]
gi|254689424|ref|ZP_05152678.1| Bacterial outer membrane protein [Brucella abortus bv. 6 str. 870]
gi|254697559|ref|ZP_05159387.1| Bacterial outer membrane protein [Brucella abortus bv. 2 str.
86/8/59]
gi|254730453|ref|ZP_05189031.1| Bacterial outer membrane protein [Brucella abortus bv. 4 str. 292]
gi|256257670|ref|ZP_05463206.1| Bacterial outer membrane protein [Brucella abortus bv. 9 str. C68]
gi|260546663|ref|ZP_05822402.1| bacterial outer membrane protein [Brucella abortus NCTC 8038]
gi|260754947|ref|ZP_05867295.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 6 str.
870]
gi|260758163|ref|ZP_05870511.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 4 str.
292]
gi|260761989|ref|ZP_05874332.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 2 str.
86/8/59]
gi|62196247|gb|AAX74547.1| OmpA family protein [Brucella abortus bv. 1 str. 9-941]
gi|82616139|emb|CAJ11182.1| MotY protein:Bacterial outer membrane protein:OmpA/MotB domain
[Brucella melitensis biovar Abortus 2308]
gi|189019925|gb|ACD72647.1| Bacterial outer membrane protein [Brucella abortus S19]
gi|260095713|gb|EEW79590.1| bacterial outer membrane protein [Brucella abortus NCTC 8038]
gi|260668481|gb|EEX55421.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 4 str.
292]
gi|260672421|gb|EEX59242.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260675055|gb|EEX61876.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 6 str.
870]
Length = 220
Score = 91.8 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 59/138 (42%), Gaps = 1/138 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ + T ++ + ++ ++ ++ FDT ++ L+++ L K D
Sbjct: 82 QEAELRAQLQGTGVSVTRNGDRIILNMPSNITFDTDQDQVKSQFYPTLNSVAIVLRKFDK 141
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ G D GS + + AL RRA +V +Y ++GI R V YG P V
Sbjct: 142 TLVDVYGFTDSTGSASYNQALSQRRAASVASYLDSQGIDPRRFSVIGYGASQPIVSNATP 201
Query: 141 DAYAKNRRAIVFLKGCRA 158
+ A+NRR + + R
Sbjct: 202 EGRAQNRRVEIQISPLRG 219
>gi|86139145|ref|ZP_01057715.1| peptidoglycan-associated lipoprotein [Roseobacter sp. MED193]
gi|85823989|gb|EAQ44194.1| peptidoglycan-associated lipoprotein [Roseobacter sp. MED193]
Length = 166
Score = 91.8 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 52/159 (32%), Positives = 80/159 (50%), Gaps = 6/159 (3%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISSPDTVLN-----ESSLQEQFSSSVGDSVFFDTS 57
+ F++++ + + + S DT + N + + F ++GD V F
Sbjct: 4 FKKAFMLVATLGLAACSNSPWDDTGAGGAGGLGNIGSNLDPASPAYFQETIGDRVLFLVD 63
Query: 58 SYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
++ PA +L W D I+GHADE G+R ++ALG RRA + Y +++
Sbjct: 64 QSTLNPAAETILQGQARWLTANPDYTVTIQGHADEQGTRIYNLALGERRANSAREYLISQ 123
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
GIS+SR++V SYGKE P E YAKNRRA+ L G
Sbjct: 124 GISSSRIQVVSYGKERPLEICSAESCYAKNRRAVTVLAG 162
>gi|90420689|ref|ZP_01228595.1| outer membrane protein [Aurantimonas manganoxydans SI85-9A1]
gi|90334980|gb|EAS48741.1| outer membrane protein [Aurantimonas manganoxydans SI85-9A1]
Length = 220
Score = 91.8 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHAD 90
T ++ + + ++ ++ ++ F T SI PA L+++ L+++D + + GH D
Sbjct: 92 GTGVSVTRVGDRIILNMPSNITFPTDQSSILPAFYPTLNSVALVLKEYDKSIVNVYGHTD 151
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + L +RA +V ++G+ R+ +G+ P E A+NRR
Sbjct: 152 SQGSDGYNFTLSQQRASSVSQLLASQGVDPRRLNTQGFGESQPVASNDTESGRAQNRRVE 211
Query: 151 VFLKGCRA 158
+ + A
Sbjct: 212 IAISPLTA 219
>gi|23502081|ref|NP_698208.1| OmpA family protein [Brucella suis 1330]
gi|161619159|ref|YP_001593046.1| OmpA/MotB domain-containing protein [Brucella canis ATCC 23365]
gi|163843469|ref|YP_001627873.1| OmpA/MotB domain-containing protein [Brucella suis ATCC 23445]
gi|225852700|ref|YP_002732933.1| OmpA/MotB domain-containing protein [Brucella melitensis ATCC
23457]
gi|254701944|ref|ZP_05163772.1| OmpA family protein [Brucella suis bv. 5 str. 513]
gi|254704489|ref|ZP_05166317.1| OmpA family protein [Brucella suis bv. 3 str. 686]
gi|254706615|ref|ZP_05168443.1| OmpA family protein [Brucella pinnipedialis M163/99/10]
gi|254710275|ref|ZP_05172086.1| OmpA family protein [Brucella pinnipedialis B2/94]
gi|254714272|ref|ZP_05176083.1| OmpA family protein [Brucella ceti M644/93/1]
gi|254717709|ref|ZP_05179520.1| OmpA family protein [Brucella ceti M13/05/1]
gi|256031769|ref|ZP_05445383.1| OmpA family protein [Brucella pinnipedialis M292/94/1]
gi|256044854|ref|ZP_05447758.1| OmpA family protein [Brucella melitensis bv. 1 str. Rev.1]
gi|256061284|ref|ZP_05451434.1| OmpA family protein [Brucella neotomae 5K33]
gi|256113758|ref|ZP_05454562.1| OmpA family protein [Brucella melitensis bv. 3 str. Ether]
gi|256159939|ref|ZP_05457657.1| OmpA family protein [Brucella ceti M490/95/1]
gi|256255170|ref|ZP_05460706.1| OmpA family protein [Brucella ceti B1/94]
gi|256369628|ref|YP_003107138.1| OmpA family protein [Brucella microti CCM 4915]
gi|260168903|ref|ZP_05755714.1| OmpA family protein [Brucella sp. F5/99]
gi|260565544|ref|ZP_05836028.1| bacterial outer membrane protein [Brucella melitensis bv. 1 str.
16M]
gi|260566267|ref|ZP_05836737.1| bacterial outer membrane protein [Brucella suis bv. 4 str. 40]
gi|261219551|ref|ZP_05933832.1| OmpA/MotB domain-containing protein [Brucella ceti M13/05/1]
gi|261314075|ref|ZP_05953272.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis
M163/99/10]
gi|261317837|ref|ZP_05957034.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis B2/94]
gi|261322046|ref|ZP_05961243.1| OmpA/MotB domain-containing protein [Brucella ceti M644/93/1]
gi|261752512|ref|ZP_05996221.1| OmpA/MotB domain-containing protein [Brucella suis bv. 5 str. 513]
gi|261755171|ref|ZP_05998880.1| OmpA/MotB domain-containing protein [Brucella suis bv. 3 str. 686]
gi|261758395|ref|ZP_06002104.1| bacterial outer membrane protein [Brucella sp. F5/99]
gi|306840330|ref|ZP_07473102.1| OmpA family protein [Brucella sp. BO2]
gi|306844105|ref|ZP_07476699.1| OmpA family protein [Brucella sp. BO1]
gi|23348039|gb|AAN30123.1| OmpA family protein [Brucella suis 1330]
gi|161335970|gb|ABX62275.1| OmpA/MotB domain protein [Brucella canis ATCC 23365]
gi|163674192|gb|ABY38303.1| OmpA/MotB domain protein [Brucella suis ATCC 23445]
gi|225641065|gb|ACO00979.1| OmpA/MotB domain protein [Brucella melitensis ATCC 23457]
gi|255999790|gb|ACU48189.1| OmpA family protein [Brucella microti CCM 4915]
gi|260151612|gb|EEW86706.1| bacterial outer membrane protein [Brucella melitensis bv. 1 str.
16M]
gi|260155785|gb|EEW90865.1| bacterial outer membrane protein [Brucella suis bv. 4 str. 40]
gi|260924640|gb|EEX91208.1| OmpA/MotB domain-containing protein [Brucella ceti M13/05/1]
gi|261294736|gb|EEX98232.1| OmpA/MotB domain-containing protein [Brucella ceti M644/93/1]
gi|261297060|gb|EEY00557.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis B2/94]
gi|261303101|gb|EEY06598.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis
M163/99/10]
gi|261738379|gb|EEY26375.1| bacterial outer membrane protein [Brucella sp. F5/99]
gi|261742265|gb|EEY30191.1| OmpA/MotB domain-containing protein [Brucella suis bv. 5 str. 513]
gi|261744924|gb|EEY32850.1| OmpA/MotB domain-containing protein [Brucella suis bv. 3 str. 686]
gi|306275548|gb|EFM57280.1| OmpA family protein [Brucella sp. BO1]
gi|306289729|gb|EFM60918.1| OmpA family protein [Brucella sp. BO2]
Length = 220
Score = 91.8 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 58/138 (42%), Gaps = 1/138 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ + T ++ + ++ ++ ++ FDT ++ L+++ L K D
Sbjct: 82 QEAELRAQLQGTGVSVTRNGDRIILNMPSNITFDTDQDQVKSQFYPTLNSVAIVLRKFDK 141
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ G D GS + + AL RRA +V +Y ++GI R V YG P
Sbjct: 142 TLVDVYGFTDSTGSASYNQALSQRRAASVASYLDSQGIDPRRFAVIGYGASQPIASNATP 201
Query: 141 DAYAKNRRAIVFLKGCRA 158
+ A+NRR + + R
Sbjct: 202 EGRAQNRRVEIQISPLRG 219
>gi|39934198|ref|NP_946474.1| OmpA/MotB [Rhodopseudomonas palustris CGA009]
gi|192289724|ref|YP_001990329.1| peptidoglycan-associated lipoprotein [Rhodopseudomonas palustris
TIE-1]
gi|39648046|emb|CAE26566.1| omp16 protein [Rhodopseudomonas palustris CGA009]
gi|192283473|gb|ACE99853.1| peptidoglycan-associated lipoprotein [Rhodopseudomonas palustris
TIE-1]
Length = 165
Score = 91.8 bits (226), Expect = 3e-17, Method: Composition-based stats.
Identities = 54/151 (35%), Positives = 74/151 (49%), Gaps = 1/151 (0%)
Query: 4 STIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRP 63
+ +L+ M N Q+ F +VGD VFF++ + P
Sbjct: 11 LKVAAVLAVALSMGACANKNGLGGADGAMAGAATPGSQQDFVVNVGDRVFFESDQSDLSP 70
Query: 64 ADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASR 122
L WL+ + F IEGHADE G+R +IALG RRA +V NY V+RGI A R
Sbjct: 71 QAAATLDKQVQWLQTYSRYTFTIEGHADERGTREYNIALGARRAQSVRNYLVSRGIDAQR 130
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
M+ SYGKE P +D +++NRRA+ L
Sbjct: 131 MRTISYGKERPVAVCNDISCWSQNRRAVTVL 161
>gi|91787678|ref|YP_548630.1| OmpA/MotB [Polaromonas sp. JS666]
gi|91696903|gb|ABE43732.1| OmpA/MotB [Polaromonas sp. JS666]
Length = 214
Score = 91.4 bits (225), Expect = 3e-17, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FFD I+P L +L ++ + + +I GH D +GS + L +R
Sbjct: 98 VTYAADAFFDFDKSVIKPEGKAKLDDLIGKIKDINLEVIIAVGHTDSVGSDTYNQKLSVR 157
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
R+ AV Y V++GI +R+ G++ P + AKNRR + + G RAN
Sbjct: 158 RSEAVKAYLVSKGIEKNRVYTEGKGEKQPVADNKTAEGRAKNRRVEIEVVGTRAN 212
>gi|84623210|ref|YP_450582.1| outer membrane protein P6 precursor [Xanthomonas oryzae pv. oryzae
MAFF 311018]
gi|84367150|dbj|BAE68308.1| outer membrane protein P6 precursor [Xanthomonas oryzae pv. oryzae
MAFF 311018]
Length = 172
Score = 91.4 bits (225), Expect = 3e-17, Method: Composition-based stats.
Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 16/168 (9%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQ---------------EQFS 45
M ST +++S +++ ++G + P T S + +
Sbjct: 1 MNKSTRVLLVSLLSVAVLAGCSKKVKETPPPATNTTAGSSVPTGPSTSGLYGPGDLDTDA 60
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLR 104
V+FD S++P +++ +L ++G+ADE GSR ++ LG R
Sbjct: 61 CLRQRVVYFDLDQDSLKPEFQAIMACHAKYLRDRPSSRITLQGNADERGSREYNMGLGER 120
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
R AV + A G SAS++ V SYG+E P +E +++NRR +
Sbjct: 121 RGNAVSSSLQAAGGSASQLTVVSYGEERPVCTESNESCWSQNRRVEIV 168
>gi|260883956|ref|ZP_05895570.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 9 str.
C68]
gi|297248510|ref|ZP_06932228.1| outer membrane protein [Brucella abortus bv. 5 str. B3196]
gi|260873484|gb|EEX80553.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 9 str.
C68]
gi|297175679|gb|EFH35026.1| outer membrane protein [Brucella abortus bv. 5 str. B3196]
Length = 232
Score = 91.4 bits (225), Expect = 3e-17, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 59/138 (42%), Gaps = 1/138 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ + T ++ + ++ ++ ++ FDT ++ L+++ L K D
Sbjct: 94 QEAELRAQLQGTGVSVTRNGDRIILNMPSNITFDTDQDQVKSQFYPTLNSVAIVLRKFDK 153
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ G D GS + + AL RRA +V +Y ++GI R V YG P V
Sbjct: 154 TLVDVYGFTDSTGSASYNQALSQRRAASVASYLDSQGIDPRRFSVIGYGASQPIVSNATP 213
Query: 141 DAYAKNRRAIVFLKGCRA 158
+ A+NRR + + R
Sbjct: 214 EGRAQNRRVEIQISPLRG 231
>gi|121594804|ref|YP_986700.1| OmpA/MotB domain-containing protein [Acidovorax sp. JS42]
gi|222110597|ref|YP_002552861.1| ompa/motb domain-containing protein [Acidovorax ebreus TPSY]
gi|120606884|gb|ABM42624.1| OmpA/MotB domain protein [Acidovorax sp. JS42]
gi|221730041|gb|ACM32861.1| OmpA/MotB domain protein [Acidovorax ebreus TPSY]
Length = 218
Score = 91.4 bits (225), Expect = 3e-17, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FFD ++P L +L S ++ + + +I GH D +G+ + L +R
Sbjct: 104 VTYAADAFFDFDKSVLKPEGKAKLDDLVSKVKGINLEVIIAVGHTDSIGTDAYNQKLSVR 163
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
RA AV Y V++GI +R+ G++ P ++ AKNRR + + G RAN
Sbjct: 164 RAEAVKAYLVSKGIEKNRVYTEGKGEKQPVADNKTKEGRAKNRRVEIEVVGTRAN 218
>gi|17987069|ref|NP_539703.1| outer membrane protein [Brucella melitensis bv. 1 str. 16M]
gi|261222366|ref|ZP_05936647.1| OmpA/MotB domain-containing protein [Brucella ceti B1/94]
gi|261325291|ref|ZP_05964488.1| OmpA/MotB domain-containing protein [Brucella neotomae 5K33]
gi|265988867|ref|ZP_06101424.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis
M292/94/1]
gi|265991281|ref|ZP_06103838.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265995118|ref|ZP_06107675.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 3 str.
Ether]
gi|265998331|ref|ZP_06110888.1| OmpA/MotB domain-containing protein [Brucella ceti M490/95/1]
gi|265999432|ref|ZP_05466341.2| bacterial outer membrane protein [Brucella melitensis bv. 2 str.
63/9]
gi|17982726|gb|AAL51967.1| outer membrane protein [Brucella melitensis bv. 1 str. 16M]
gi|260920950|gb|EEX87603.1| OmpA/MotB domain-containing protein [Brucella ceti B1/94]
gi|261301271|gb|EEY04768.1| OmpA/MotB domain-containing protein [Brucella neotomae 5K33]
gi|262552799|gb|EEZ08789.1| OmpA/MotB domain-containing protein [Brucella ceti M490/95/1]
gi|262766231|gb|EEZ12020.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 3 str.
Ether]
gi|263002065|gb|EEZ14640.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263093937|gb|EEZ17871.1| bacterial outer membrane protein [Brucella melitensis bv. 2 str.
63/9]
gi|264661064|gb|EEZ31325.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis
M292/94/1]
gi|326409224|gb|ADZ66289.1| OmpA/MotB domain-containing protein [Brucella melitensis M28]
gi|326538933|gb|ADZ87148.1| OmpA/MotB domain protein [Brucella melitensis M5-90]
Length = 232
Score = 91.4 bits (225), Expect = 3e-17, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 58/138 (42%), Gaps = 1/138 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ + T ++ + ++ ++ ++ FDT ++ L+++ L K D
Sbjct: 94 QEAELRAQLQGTGVSVTRNGDRIILNMPSNITFDTDQDQVKSQFYPTLNSVAIVLRKFDK 153
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ G D GS + + AL RRA +V +Y ++GI R V YG P
Sbjct: 154 TLVDVYGFTDSTGSASYNQALSQRRAASVASYLDSQGIDPRRFAVIGYGASQPIASNATP 213
Query: 141 DAYAKNRRAIVFLKGCRA 158
+ A+NRR + + R
Sbjct: 214 EGRAQNRRVEIQISPLRG 231
>gi|254693909|ref|ZP_05155737.1| Bacterial outer membrane protein [Brucella abortus bv. 3 str.
Tulya]
gi|261214200|ref|ZP_05928481.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 3 str.
Tulya]
gi|260915807|gb|EEX82668.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 3 str.
Tulya]
Length = 216
Score = 91.4 bits (225), Expect = 3e-17, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 59/138 (42%), Gaps = 1/138 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ + T ++ + ++ ++ ++ FDT ++ L+++ L K D
Sbjct: 78 QEAELRAQLQGTGVSVTRNGDRIILNMPSNITFDTDQDQVKSQFYPTLNSVAIVLRKFDK 137
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ G D GS + + AL RRA +V +Y ++GI R V YG P V
Sbjct: 138 TLVDVYGFTDSTGSASYNQALSQRRAASVASYLDSQGIDPRRFSVIGYGASQPIVSNATP 197
Query: 141 DAYAKNRRAIVFLKGCRA 158
+ A+NRR + + R
Sbjct: 198 EGRAQNRRVEIQISPLRG 215
>gi|260061425|ref|YP_003194505.1| Thrombospondin type 3 repeat:OmpA/MotB [Robiginitalea biformata
HTCC2501]
gi|88785557|gb|EAR16726.1| Thrombospondin type 3 repeat:OmpA/MotB [Robiginitalea biformata
HTCC2501]
Length = 446
Score = 91.4 bits (225), Expect = 3e-17, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 6/136 (4%)
Query: 22 DNLDTKISSPDTVLN-----ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW- 75
D D + TV N + + + ++ FDT S++P +V ++
Sbjct: 306 DKDDECPDTAGTVANNGCPEVTEEVQAQLNEYARTILFDTGKASLKPESTRVFVDIIRIL 365
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+ + F +EGH D +GS + + L RA +V ++ + GI ASR++ YG+E P
Sbjct: 366 DQYPNSRFTVEGHTDSVGSNSLNQKLSEERANSVRDFLINEGIDASRLEAVGYGEERPIA 425
Query: 136 YGHDEDAYAKNRRAIV 151
+ +NRR +
Sbjct: 426 TNNTRAGRTQNRRVEI 441
>gi|262197986|ref|YP_003269195.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
gi|262081333|gb|ACY17302.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
Length = 1755
Score = 91.4 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 8/141 (5%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS------SSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
+D LD V N+ ++EQ + D V+F+T IR +L+N+
Sbjct: 1603 VDRLDNCPDEAGPVENQGCVKEQLVQITDNQIIILDRVYFETDKARIRSRSFALLNNVVQ 1662
Query: 75 WLEKHD--CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
LE H + IEGH D+ GS ++ L RRA +V ++ + G+ R++ YG+
Sbjct: 1663 VLEAHPEIANVRIEGHTDDRGSDAYNLDLSDRRAASVVSFLIEAGVDPVRLQSVGYGETR 1722
Query: 133 PSVYGHDEDAYAKNRRAIVFL 153
P + A NRR +
Sbjct: 1723 PVRENGSREGRAANRRVEFHI 1743
>gi|78048827|ref|YP_365002.1| PAL family outer membrane lipoprotein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|294626855|ref|ZP_06705447.1| PAL family outer membrane lipoprotein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|294665412|ref|ZP_06730700.1| PAL family outer membrane lipoprotein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|325929356|ref|ZP_08190486.1| peptidoglycan-associated lipoprotein [Xanthomonas perforans 91-118]
gi|78037257|emb|CAJ25002.1| PAL family outer membrane lipoprotein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|292598869|gb|EFF43014.1| PAL family outer membrane lipoprotein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292604823|gb|EFF48186.1| PAL family outer membrane lipoprotein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|325540268|gb|EGD11880.1| peptidoglycan-associated lipoprotein [Xanthomonas perforans 91-118]
Length = 172
Score = 91.4 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 16/168 (9%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQ---------------EQFS 45
M ST +++S +++ ++G + P T S + +
Sbjct: 1 MNKSTRVLLVSLLSVAVLAGCSKKVKETPPPATDTTAGSSVPTGPSTSGLYGPGDLDTDA 60
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLR 104
V+FD S++P +++ +L ++G+ADE GSR ++ LG R
Sbjct: 61 CLRQRVVYFDLDQDSLKPEFQAIMACHAKYLRDRPSSRITLQGNADERGSREYNMGLGER 120
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
R AV + A G SAS++ V SYG+E P +E +++NRR +
Sbjct: 121 RGNAVSSSLQAAGGSASQLTVVSYGEERPVCTESNESCWSQNRRVEIV 168
>gi|91762267|ref|ZP_01264232.1| OmpA family protein [Candidatus Pelagibacter ubique HTCC1002]
gi|91718069|gb|EAS84719.1| OmpA family protein [Candidatus Pelagibacter ubique HTCC1002]
Length = 180
Score = 91.4 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 4/156 (2%)
Query: 1 MQYSTIF---IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS 57
M S I ++ +++ + T V + E +S V D VFF T+
Sbjct: 22 MNLSKILKNGFLIILASLVLTACATKKTTTGQMQGDVYTGTDSVEYLASGVPDRVFFATN 81
Query: 58 SYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
+ A + L +W + D + ++EGHADE G+R ++ALG RRA + +Y +
Sbjct: 82 ETVLTTASRETLRKQAAWLRKNSDINVVLEGHADERGTREYNLALGERRANSAKDYLMTY 141
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
GIS+ R+ V SYGKE P G + A++KNRR++
Sbjct: 142 GISSERISVLSYGKERPVDSGSNPLAWSKNRRSVTV 177
>gi|326316785|ref|YP_004234457.1| OmpA/MotB domain-containing protein [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323373621|gb|ADX45890.1| OmpA/MotB domain protein [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 219
Score = 91.4 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FFD ++P L +L S ++ + + +I GH D +G+ + L +R
Sbjct: 105 VTYAADAFFDFDKSVLKPEGKAKLDDLVSKVKNVNLEVIIAVGHTDSIGTDAYNQKLSVR 164
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
RA AV Y V++GI +R+ G++ P ++ AKNRR + + G RAN
Sbjct: 165 RAEAVKAYLVSKGIEKNRVYTEGKGEKQPIADNKTKEGRAKNRRVEIEVVGTRAN 219
>gi|120611935|ref|YP_971613.1| OmpA/MotB domain-containing protein [Acidovorax citrulli AAC00-1]
gi|120590399|gb|ABM33839.1| OmpA/MotB domain protein [Acidovorax citrulli AAC00-1]
Length = 219
Score = 91.4 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FFD ++P L +L S ++ + + +I GH D +G+ + L +R
Sbjct: 105 VTYAADAFFDFDKSVLKPEGKAKLDDLVSKVKNVNLEVIIAVGHTDSIGTDAYNQKLSVR 164
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
RA AV Y V++GI +R+ G++ P ++ AKNRR + + G RAN
Sbjct: 165 RAEAVKAYLVSKGIEKNRVYTEGKGEKQPIADNKTKEGRAKNRRVEIEVVGTRAN 219
>gi|330504604|ref|YP_004381473.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
gi|328918890|gb|AEB59721.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
Length = 261
Score = 91.4 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 2/135 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
D D +I LN + + GD V FD + ++ + + ++ L +L+++
Sbjct: 115 DARDAQIRKLQESLNAKQTERGTLVTFGD-VLFDFNKADLKSSALPNITQLARFLQENPE 173
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++EG+ D +GS + + L RRA +V + G+ +R+ YGKE P +
Sbjct: 174 RQVIVEGYTDSVGSASYNQGLSERRAESVRRALIRAGVEPTRIVAQGYGKEYPVADNSSD 233
Query: 141 DAYAKNRRAIVFLKG 155
A+NRR V +
Sbjct: 234 SGRAQNRRVEVTISN 248
>gi|121605683|ref|YP_983012.1| OmpA/MotB domain-containing protein [Polaromonas naphthalenivorans
CJ2]
gi|120594652|gb|ABM38091.1| OmpA/MotB domain protein [Polaromonas naphthalenivorans CJ2]
Length = 210
Score = 91.4 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 1/115 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FFD I+PA + L +L ++ + + +I GH D +GS + + L +R
Sbjct: 95 VTYAADAFFDFDKSVIKPAGKEKLDDLIGKIKDINLEVIIAVGHTDSVGSDSYNQKLSVR 154
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
R+ AV Y V++GI +R+ G++ P + AKNRR + + G RAN
Sbjct: 155 RSEAVKAYLVSKGIEKNRVYTEGKGEKQPVADNKTAEGRAKNRRVEIEVVGTRAN 209
>gi|300113303|ref|YP_003759878.1| OmpA/MotB domain-containing protein [Nitrosococcus watsonii C-113]
gi|299539240|gb|ADJ27557.1| OmpA/MotB domain protein [Nitrosococcus watsonii C-113]
Length = 283
Score = 91.4 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 54/131 (41%), Gaps = 2/131 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD- 80
D+LD + V + + + V F S + P +L + + H
Sbjct: 150 DDLDECPDTAHGVSVD-EVGCPKPVVLQSGVHFGFDSAKLSPNAHTILDKVAEKMRAHPN 208
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
I G+ D +G+ + ++ L RA A +Y + GI SRM+ G+E P +
Sbjct: 209 LKVTITGYTDSIGNADYNMRLSKLRAEAAMDYLSSEGIDPSRMEAVGRGEERPVASNSTK 268
Query: 141 DAYAKNRRAIV 151
+ AKNRR +
Sbjct: 269 EGRAKNRRVEL 279
>gi|254491758|ref|ZP_05104937.1| OmpA family protein [Methylophaga thiooxidans DMS010]
gi|224463236|gb|EEF79506.1| OmpA family protein [Methylophaga thiooxydans DMS010]
Length = 306
Score = 91.4 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 45/123 (36%), Gaps = 4/123 (3%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS--- 94
++ + V F++ + A + V+ + L+ +EG D
Sbjct: 135 KQGEDWLELEIKSRVLFESGEARLERAAVPVIGKIADILQTSANPIQVEGFTDNNPINTS 194
Query: 95 -RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA +V + GI RM YG+ P E+ KNRR ++ +
Sbjct: 195 RFPSNWELSAARAASVVHLLDRYGIQPDRMSAIGYGEYKPIADNATEEGRQKNRRVVLVV 254
Query: 154 KGC 156
G
Sbjct: 255 LGS 257
>gi|114319490|ref|YP_741173.1| OmpA/MotB domain-containing protein [Alkalilimnicola ehrlichii
MLHE-1]
gi|114225884|gb|ABI55683.1| OmpA/MotB domain protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 224
Score = 91.4 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 48/122 (39%), Gaps = 1/122 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
T ++ + E ++ V F S +R +VL ++ E + GH D
Sbjct: 97 GTGVSVTRDGENVILNMPGHVTFAFDSADLRSDFFEVLDSVAIVANEFDQTMIEVAGHTD 156
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + L RRA V Y V R ++ RM +G+E P E+ +NRR
Sbjct: 157 STGPAEYNQRLSERRAQTVARYLVGRDVAEMRMIAVGFGEERPIASNQTEEGRQQNRRVE 216
Query: 151 VF 152
+
Sbjct: 217 IT 218
>gi|323525290|ref|YP_004227443.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1001]
gi|323382292|gb|ADX54383.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1001]
Length = 168
Score = 91.4 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 34/163 (20%), Positives = 67/163 (41%), Gaps = 3/163 (1%)
Query: 1 MQYSTIFII--LSAITMMSISGIDNLDTKIS-SPDTVLNESSLQEQFSSSVGDSVFFDTS 57
M+ +S + M + N DT++S + + + + + + ++ FD +
Sbjct: 1 MKKLLATSACAMSVLFMAGCTAPLNRDTEMSLNKAAGIEVAPVANGVAVKLPETALFDFN 60
Query: 58 SYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG 117
+RP V+ L++ ++EG+ D +G+ + L RA AV VARG
Sbjct: 61 KSEVRPDASAVVDRSAVLLKRSKKPIIVEGYTDNVGTLEYNQQLSEARAVAVGYALVARG 120
Query: 118 ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
+ R++ P + A NRR + ++G +T
Sbjct: 121 VPMERIRTKGNAYNNPVASNDTPEGRALNRRTEIVVRGETMDT 163
>gi|121602322|ref|YP_988503.1| peptidoglycan-associated lipoprotein [Bartonella bacilliformis
KC583]
gi|120614499|gb|ABM45100.1| peptidoglycan-associated lipoprotein [Bartonella bacilliformis
KC583]
Length = 174
Score = 91.4 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 11/162 (6%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDT----------VLNESSLQEQFSSSVGDSVFFDTS 57
+ + + ++S++G + ++ ++ F+ +VGD VFF
Sbjct: 12 LTMVFVCLLSVAGCGKKNINPTNGMGFFANNAEYSYGNATPGSEQDFAITVGDRVFFSLD 71
Query: 58 SYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
S I ++L WL +IEGHAD+ G+R ++ALG RRA AV +Y V+
Sbjct: 72 SSVIEADAQRILVRQAEWLLLYPHHTIMIEGHADDRGTREYNLALGQRRAIAVRDYLVSL 131
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
G+S RMK SYGKE P D + +NRR ++ + R
Sbjct: 132 GVSPQRMKTMSYGKERPVAVCDDISCWNQNRRVVISITSGRG 173
>gi|187477844|ref|YP_785868.1| outer membrane protein A [Bordetella avium 197N]
gi|585615|sp|Q05146|OMPA_BORAV RecName: Full=Outer membrane protein A; Flags: Precursor
gi|144052|gb|AAA22979.1| outer membrane protein A [Bordetella avium]
gi|115422430|emb|CAJ48955.1| outer membrane protein A [Bordetella avium 197N]
Length = 194
Score = 91.4 bits (225), Expect = 4e-17, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 57/141 (40%), Gaps = 3/141 (2%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
+GI D + + + + FFD +++P Q+L +
Sbjct: 55 ATGIPGCDGVPVAQQPKEKPAPMAAKVV--FNADTFFDFDKSTLKPEGRQLLDQVAQQAR 112
Query: 78 KHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
D + G+ D +G+ ++ L RRA +V Y V++GI +R+ GK P
Sbjct: 113 AIDLETIIAVGNTDSIGTEAYNMKLSERRAASVKAYLVSKGIDPNRIYTEGKGKLNPIAS 172
Query: 137 GHDEDAYAKNRRAIVFLKGCR 157
+ A+NRR + + G R
Sbjct: 173 NKTAEGRARNRRVEIEIVGSR 193
>gi|226330927|ref|ZP_03806445.1| hypothetical protein PROPEN_04850 [Proteus penneri ATCC 35198]
gi|225201722|gb|EEG84076.1| hypothetical protein PROPEN_04850 [Proteus penneri ATCC 35198]
Length = 175
Score = 91.0 bits (224), Expect = 4e-17, Method: Composition-based stats.
Identities = 53/162 (32%), Positives = 80/162 (49%), Gaps = 11/162 (6%)
Query: 1 MQYSTIF----IILSAITMMSISG------IDNLDTKISSPDTVLNESSLQEQFSSSVGD 50
MQ + +F + L + + + S D + + E + Q+ +
Sbjct: 12 MQLNKVFKGLMLALPLVAVAACSSNKNDDQTDTNNVPVVEQGPTAEELARQQLEQLKQQN 71
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAV 109
V+F Y I +L ++L + +EGHADE G+ +IALG RRA AV
Sbjct: 72 IVYFGFDKYDISSDYANLLDAHAAFLRANPSVRITVEGHADERGTPEYNIALGERRANAV 131
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
Y +G+SA ++ + SYGKE P+V GHDE AYAKNRRA++
Sbjct: 132 KMYLQGKGVSAEQLSIVSYGKEKPAVLGHDEAAYAKNRRAVL 173
>gi|326319300|ref|YP_004236972.1| OmpA/MotB domain-containing protein [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323376136|gb|ADX48405.1| OmpA/MotB domain protein [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 296
Score = 91.0 bits (224), Expect = 4e-17, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 53/126 (42%), Gaps = 2/126 (1%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELG 93
+ + ++GD V F + + L L ++ + D +IEGH D +G
Sbjct: 168 IEAQQTERGLLVTLGD-VLFAFNKAELSAQAGPRLDKLANFLRQFPDRKLIIEGHTDSVG 226
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +L RRA AV + V RG++ R+ YGK P + A NRR + +
Sbjct: 227 GDAYNQSLSERRAQAVQSALVQRGVAPDRITARGYGKTYPVADNSSPEGRAMNRRVEIVI 286
Query: 154 KGCRAN 159
+ N
Sbjct: 287 ADDKGN 292
>gi|197106951|ref|YP_002132328.1| OmpA family protein [Phenylobacterium zucineum HLK1]
gi|196480371|gb|ACG79899.1| OmpA family protein [Phenylobacterium zucineum HLK1]
Length = 221
Score = 91.0 bits (224), Expect = 4e-17, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 1/129 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHA 89
+ + + ++ V F ++ VL ++ + L ++ + GHA
Sbjct: 93 AGSGVEVERRGDDIVLNMPSDVTFGVDQSDVQSRFYPVLDDIAATLSRYPQTLIDVAGHA 152
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G+ + AL RRA +V +Y V+RG+ R+ V YG+ P E A+NRR
Sbjct: 153 DSTGADAYNQALSERRASSVASYLVSRGVLQDRLYVVGYGESRPVASNATEQGRAQNRRV 212
Query: 150 IVFLKGCRA 158
+ ++ R
Sbjct: 213 EITVRPFRG 221
>gi|295696765|ref|YP_003590003.1| OmpA/MotB domain protein [Bacillus tusciae DSM 2912]
gi|295412367|gb|ADG06859.1| OmpA/MotB domain protein [Bacillus tusciae DSM 2912]
Length = 266
Score = 91.0 bits (224), Expect = 4e-17, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 4/136 (2%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ + + S+ D + FDT ++P ++L L +L + IE
Sbjct: 117 QKQGVAGQVVVEDKPKGLLISLRDVILFDTGKADLKPEARKLLDGLLPFLAQVGNPLEIE 176
Query: 87 GHADELGSR----NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
GH D S+ L RA V Y A+GI R+ T YG+ P + +
Sbjct: 177 GHTDNRPIHTAQFPSNWELSTARALTVLEYLQAKGIDPKRLSATGYGEWRPVASNDNPEG 236
Query: 143 YAKNRRAIVFLKGCRA 158
A NRR + ++ A
Sbjct: 237 QALNRRVNITIERTSA 252
>gi|170723276|ref|YP_001750964.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619]
gi|169761279|gb|ACA74595.1| OmpA/MotB domain protein [Pseudomonas putida W619]
Length = 262
Score = 91.0 bits (224), Expect = 4e-17, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 2/145 (1%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
A + + +D D +I+ LN + GD V FD + ++ + + ++
Sbjct: 105 ASAQRAQAKLDARDAQIAKLQDSLNAKQTDRGTLVTFGD-VLFDFNKAELKSSALPNVTK 163
Query: 72 LGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
L + E + ++EG+ D +GS N + +L RRA AV V G+ +R+ YGK
Sbjct: 164 LAQFLQENPERKVIVEGYTDSVGSANYNQSLSERRAGAVRMALVRAGVDPARIVAQGYGK 223
Query: 131 EMPSVYGHDEDAYAKNRRAIVFLKG 155
E P A+NRR V +
Sbjct: 224 EYPVADNSSNSGRAQNRRVEVTISN 248
>gi|255323068|ref|ZP_05364204.1| outer membrane fibronectin-binding protein [Campylobacter showae
RM3277]
gi|255299930|gb|EET79211.1| outer membrane fibronectin-binding protein [Campylobacter showae
RM3277]
Length = 332
Score = 91.0 bits (224), Expect = 4e-17, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 1/130 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHD 80
+++D ++P V+ + + E+ V F SY I P ++ + + +++ E
Sbjct: 198 NDVDQCPNTPAGVVVDETGCEKVIVLRDIGVNFAFDSYKITPKYLEEIRKVANFMGENPG 257
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++ GH D +G+ + L +RA AV G+SA ++ YG+ P +
Sbjct: 258 YRVVLSGHTDSVGAEAYNQKLSEKRANAVAKALEELGVSADKITTVGYGELKPVASNKTK 317
Query: 141 DAYAKNRRAI 150
+ A+NRR
Sbjct: 318 EGRAENRRVE 327
>gi|148549426|ref|YP_001269528.1| OmpA/MotB domain-containing protein [Pseudomonas putida F1]
gi|148513484|gb|ABQ80344.1| OmpA/MotB domain protein [Pseudomonas putida F1]
Length = 263
Score = 91.0 bits (224), Expect = 5e-17, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 2/145 (1%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
A + + +D D +I+ LN + GD V FD + ++ + ++
Sbjct: 105 ASAQRAQAKLDARDAQIAKLQDSLNAKQTDRGTLVTFGD-VLFDFNKAELKSSAYPNITK 163
Query: 72 LGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
L + E + ++EG+ D +GS N + L RRA +V V G+ +R+ YGK
Sbjct: 164 LAQFLQENPERKVIVEGYTDSVGSANYNQTLSERRANSVRMALVRAGVDPARIVSQGYGK 223
Query: 131 EMPSVYGHDEDAYAKNRRAIVFLKG 155
E P A+NRR V +
Sbjct: 224 EYPVADNSSNSGRAQNRRVEVTISN 248
>gi|182680300|ref|YP_001834446.1| peptidoglycan-associated lipoprotein [Beijerinckia indica subsp.
indica ATCC 9039]
gi|182636183|gb|ACB96957.1| peptidoglycan-associated lipoprotein [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 172
Score = 91.0 bits (224), Expect = 5e-17, Method: Composition-based stats.
Identities = 52/158 (32%), Positives = 75/158 (47%), Gaps = 8/158 (5%)
Query: 4 STIFIILSAITMMSISGIDNLDTKIS-------SPDTVLNESSLQEQFSSSVGDSVFFDT 56
+ +L M+ + D + + F+ +VGD VFF++
Sbjct: 10 LKLGAVLGVALAMAACAKNPADDPTALAGYGANGGRGGAASPGSPQDFAVNVGDRVFFES 69
Query: 57 SSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA 115
S + L WL+++ F IEGHADE G+R + ALG RRA A NY VA
Sbjct: 70 DSSELTQTAQATLDKQAHWLQQYGRYTFTIEGHADERGTREYNFALGARRAEAAKNYLVA 129
Query: 116 RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RGI+ SR++ SYGKE P D +++NRRA+ L
Sbjct: 130 RGIATSRLRTISYGKERPVATCDDISCWSQNRRAVTVL 167
>gi|325295240|ref|YP_004281754.1| OmpA/MotB domain protein [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325065688|gb|ADY73695.1| OmpA/MotB domain protein [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 251
Score = 91.0 bits (224), Expect = 5e-17, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 1/132 (0%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDC 81
+ + + + + + DSV F +SY ++P + L L + D
Sbjct: 108 QVTGAPITENKPVAVVKEPNRVRVVLKDSVLFGFNSYQLKPEAKETLRRLARTLSQNPDT 167
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
+I G D GS + ++ L +RA +V N V G+ +R+ V G + P + +
Sbjct: 168 VIVISGFTDSTGSFDYNVRLSEKRAESVKNELVLNGVDPTRILVFGCGPKKPIAPNNTPE 227
Query: 142 AYAKNRRAIVFL 153
A NRR + +
Sbjct: 228 GRALNRRVEILV 239
>gi|319762553|ref|YP_004126490.1| ompa/motb domain protein [Alicycliphilus denitrificans BC]
gi|317117114|gb|ADU99602.1| OmpA/MotB domain protein [Alicycliphilus denitrificans BC]
Length = 240
Score = 91.0 bits (224), Expect = 5e-17, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 1/115 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FFD ++P L +L S ++ + + +I GH D +G+ + L +R
Sbjct: 126 VTYAADAFFDFDKSVLKPEGKAKLDDLVSKVKGINLEVIIAVGHTDSIGTDAYNQKLSVR 185
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
RA AV Y V++GI +R+ G++ P ++ AKNRR + + G R N
Sbjct: 186 RAEAVKAYLVSKGIEKNRVYTEGKGEKQPIADNKTKEGRAKNRRVEIEVVGTRTN 240
>gi|149774748|gb|ABR28420.1| OmpA/MotB [Delftia tsuruhatensis]
Length = 219
Score = 91.0 bits (224), Expect = 5e-17, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FFD ++P L +L S ++ + + +I GH D +GS + L +R
Sbjct: 104 VTFSADAFFDFDKSVLKPEGKAKLDDLASKVKGINLEVVIAVGHTDSVGSDAYNQKLSVR 163
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
RA AV Y V++GI +R+ G++ P ++ AKNRR + + G RA
Sbjct: 164 RAEAVKAYLVSKGIEKNRVYTEGKGEKQPIADNKTKEGRAKNRRVEIEVVGTRA 217
>gi|160900150|ref|YP_001565732.1| OmpA/MotB domain-containing protein [Delftia acidovorans SPH-1]
gi|151500323|gb|ABS12102.1| OmpA/MotB [Delftia acidovorans]
gi|160365734|gb|ABX37347.1| OmpA/MotB domain protein [Delftia acidovorans SPH-1]
Length = 219
Score = 91.0 bits (224), Expect = 5e-17, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FFD ++P L +L S ++ + + +I GH D +GS + L +R
Sbjct: 104 VTFSADAFFDFDKSVLKPEGKAKLDDLASKVKGINLEVVIAVGHTDSVGSDAYNQKLSVR 163
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
RA AV Y V++GI +R+ G++ P ++ AKNRR + + G RA
Sbjct: 164 RAEAVKAYLVSKGIEKNRVYTEGKGEKQPIADNKTKEGRAKNRRVEIEVVGTRA 217
>gi|154174678|ref|YP_001407584.1| outer membrane fibronectin-binding protein [Campylobacter curvus
525.92]
gi|112803800|gb|EAU01144.1| outer membrane fibronectin-binding protein [Campylobacter curvus
525.92]
Length = 337
Score = 91.0 bits (224), Expect = 5e-17, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 54/130 (41%), Gaps = 1/130 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHD 80
+++D ++P V+ + + E+ V F SY + P + + ++ E +
Sbjct: 203 NDIDKCPNTPAGVVVDETGCEKVIVLRDLDVNFAFDSYKVGPGYAAEIKKVADFMGEHPE 262
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++ GH D +G + L +RA AV G+ ++ YG+ P +
Sbjct: 263 YRVVLAGHTDSVGKEAYNQKLSEKRAKAVAEVLEGYGVEKKKISTIGYGELRPIATNSTK 322
Query: 141 DAYAKNRRAI 150
+ A+NRR
Sbjct: 323 EGRAQNRRVE 332
>gi|332664040|ref|YP_004446828.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332332854|gb|AEE49955.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 651
Score = 91.0 bits (224), Expect = 5e-17, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 64/146 (43%), Gaps = 6/146 (4%)
Query: 14 TMMSISGIDNLD-----TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
+++ + + D + ++ + + V +VFF+T+S ++R
Sbjct: 505 ANFALAEVRSADQAYELSAGLQALPQTSDLVANKDQAPVVLRNVFFETASAALRQESGPE 564
Query: 69 LSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
L +L + + I GH D +G+ ++ L +RA AV+ Y V +GI+A R+
Sbjct: 565 LDHLADLLNQNPNLRIQINGHTDNVGTDADNLRLSEQRAKAVYTYLVGKGIAAERLAYKG 624
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFL 153
+G+ P + E+ NRR +
Sbjct: 625 FGETQPIADNNTEEGRKVNRRTEFVV 650
>gi|218961893|ref|YP_001741668.1| hypothetical protein; putative signal peptide [Candidatus
Cloacamonas acidaminovorans]
gi|167730550|emb|CAO81462.1| hypothetical protein; putative signal peptide [Candidatus
Cloacamonas acidaminovorans]
Length = 911
Score = 91.0 bits (224), Expect = 5e-17, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNSSIA 100
E+ + ++V F+ + + P +++L + + E + + GH D +GS+ +
Sbjct: 678 EKEAVFELENVEFEFNKAVLTPKSLEILKPILATMKENETLEIELSGHTDNIGSKQYNRK 737
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
L RA AV +Y + GI R+K YG + P + +NRR + + G
Sbjct: 738 LSEARAKAVADYLIKNGIDPKRIKTVGYGFDKPIASNDTPEGRQRNRRTEMKILG 792
>gi|188584571|ref|YP_001928016.1| peptidoglycan-associated lipoprotein [Methylobacterium populi
BJ001]
gi|179348069|gb|ACB83481.1| peptidoglycan-associated lipoprotein [Methylobacterium populi
BJ001]
Length = 170
Score = 91.0 bits (224), Expect = 5e-17, Method: Composition-based stats.
Identities = 53/165 (32%), Positives = 78/165 (47%), Gaps = 7/165 (4%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNE------SSLQEQFSSSVGDSVFFD 55
++ + + L+ + + + N + F +VGD VFF+
Sbjct: 6 RFRGLSLTLALCAALGLGACSKDSDLADASGFGANGAGGVARPGSAQDFVVNVGDRVFFE 65
Query: 56 TSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
+ S + P L SW FLIEGHADE G+R + +LG RRA V +Y
Sbjct: 66 SDSTDLTPTATATLDKQASWLQRYPRYSFLIEGHADERGTREYNYSLGARRAQTVQDYLA 125
Query: 115 ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
+RGISASRM+ SYGKE P +D +++NRRA+ L G +
Sbjct: 126 SRGISASRMRTVSYGKERPVAVCNDISCWSQNRRAVSVLDGGAGS 170
>gi|316932667|ref|YP_004107649.1| peptidoglycan-associated lipoprotein [Rhodopseudomonas palustris
DX-1]
gi|315600381|gb|ADU42916.1| peptidoglycan-associated lipoprotein [Rhodopseudomonas palustris
DX-1]
Length = 165
Score = 91.0 bits (224), Expect = 5e-17, Method: Composition-based stats.
Identities = 55/151 (36%), Positives = 75/151 (49%), Gaps = 1/151 (0%)
Query: 4 STIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRP 63
+ +L+ M N Q+ F +VGD VFF++ + P
Sbjct: 11 LKVAAVLAVALSMGACANKNGLGGADGAMAGAATPGSQQDFVVNVGDRVFFESDQSDLSP 70
Query: 64 ADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASR 122
L WL+ + F IEGHADE G+R +IALG RRA +V NY V+RGI ASR
Sbjct: 71 QAAATLDKQVQWLQTYARYTFTIEGHADERGTREYNIALGARRAQSVRNYLVSRGIDASR 130
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
M+ SYGKE P +D +++NRRA+ L
Sbjct: 131 MRTISYGKERPVAVCNDISCWSQNRRAVTVL 161
>gi|166712982|ref|ZP_02244189.1| outer membrane protein P6 precursor [Xanthomonas oryzae pv.
oryzicola BLS256]
Length = 172
Score = 91.0 bits (224), Expect = 5e-17, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 73/168 (43%), Gaps = 16/168 (9%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQ---------------EQFS 45
M T +++S +++ ++G + P T S + +
Sbjct: 1 MNKFTRVLLVSLLSVAVLAGCSKKVKETPPPATNTTAVSSVPTGPSTSGLYGPGDLDTDA 60
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLR 104
V+FD S++P +++ +L ++G+ADE GSR ++ LG R
Sbjct: 61 CLRQRVVYFDLDQDSLKPEFQAIMACHAKYLRDRPSSRITLQGNADERGSREYNMGLGER 120
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
R AV + A G SAS++ V SYG+E P +E +++NRR +
Sbjct: 121 RGNAVSSSLQAAGGSASQLTVVSYGEERPVCTESNESCWSQNRRVEIV 168
>gi|21232447|ref|NP_638364.1| outer membrane protein P6 precursor [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66767470|ref|YP_242232.1| outer membrane protein P6 precursor [Xanthomonas campestris pv.
campestris str. 8004]
gi|188990576|ref|YP_001902586.1| PAL family outer membrane lipoprotein [Xanthomonas campestris pv.
campestris str. B100]
gi|21114228|gb|AAM42288.1| outer membrane protein P6 precursor [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66572802|gb|AAY48212.1| outer membrane protein P6 precursor [Xanthomonas campestris pv.
campestris str. 8004]
gi|167732336|emb|CAP50528.1| PAL family outer membrane lipoprotein [Xanthomonas campestris pv.
campestris]
Length = 172
Score = 91.0 bits (224), Expect = 5e-17, Method: Composition-based stats.
Identities = 42/168 (25%), Positives = 73/168 (43%), Gaps = 16/168 (9%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQ---------------EQFS 45
M ST +++S +++ ++G + P T S + +
Sbjct: 1 MNKSTRVLLVSLLSVAVLAGCSKKVKETPPPATDTTAGSTAPTGPSTSGLYGPGDLDTDA 60
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLR 104
V+FD S++P +++ +L ++G+ADE GSR ++ LG R
Sbjct: 61 CLRQRVVYFDLDQDSLKPEFQAIMACHAKYLRDRPSSRITLQGNADERGSREYNMGLGER 120
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
R AV + A G SAS++ V SYG+E P E +++NRR +
Sbjct: 121 RGNAVSSALQAAGGSASQLTVVSYGEERPVCTETSESCWSQNRRVEIV 168
>gi|183984604|ref|YP_001852895.1| outer membrane protein a OmpA [Mycobacterium marinum M]
gi|183177930|gb|ACC43040.1| outer membrane protein a OmpA [Mycobacterium marinum M]
Length = 332
Score = 91.0 bits (224), Expect = 5e-17, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 53/140 (37%), Gaps = 1/140 (0%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
+ + G T + P + LQ ++ G ++ F S+ P +VL+ +
Sbjct: 193 IEVKGQPAGSTPPTGPAATGACADLQAAVTALTGGAIAFGNDGVSLTPDSNKVLTQVVDK 252
Query: 76 LEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
L + G+ D GS +I L +RA V ++ VA G+ + G P
Sbjct: 253 LRACPDAKVTVNGYTDNSGSEGLNIPLSAQRAQTVADFLVAHGVPTDHITAKGLGSANPI 312
Query: 135 VYGHDEDAYAKNRRAIVFLK 154
+ KNRR + +
Sbjct: 313 ASNDTAEGRIKNRRVEIVVS 332
>gi|87201185|ref|YP_498442.1| OmpA/MotB [Novosphingobium aromaticivorans DSM 12444]
gi|87136866|gb|ABD27608.1| OmpA/MotB [Novosphingobium aromaticivorans DSM 12444]
Length = 230
Score = 90.6 bits (223), Expect = 5e-17, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 58/129 (44%), Gaps = 1/129 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFL 84
+ + + E+ + ++ + V FD S +++PA L + ++ +
Sbjct: 87 EQTAGTGVDVTETDNGQAILVNLPNGVTFDVDSSTVKPAFATTLDRVAQSLVQYPNSLID 146
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+ GH D GS + AL RRA AV +Y ++RG+ +R++ +G+ P E
Sbjct: 147 VYGHTDSTGSDAYNQALSERRARAVADYLISRGVGYARIRSQGFGESQPIASNDTEQGRQ 206
Query: 145 KNRRAIVFL 153
NRR + +
Sbjct: 207 ANRRVEIKI 215
>gi|298207224|ref|YP_003715403.1| Thrombospondin type 3 repeat:OmpA/MotB [Croceibacter atlanticus
HTCC2559]
gi|83849860|gb|EAP87728.1| Thrombospondin type 3 repeat:OmpA/MotB [Croceibacter atlanticus
HTCC2559]
Length = 478
Score = 90.6 bits (223), Expect = 5e-17, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 55/142 (38%), Gaps = 6/142 (4%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSS-----SVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
D D TV N + ++ FD + +IR + L N+ +
Sbjct: 336 DKDDQCPDVAGTVANNGCPEVTVEVMNELNEYSRTILFDLNKSTIRSESFETLQNIADIM 395
Query: 77 -EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
E F IEGH D GS + L RA +V Y +G++A+++ YG+ P
Sbjct: 396 SEYPTAKFHIEGHTDSQGSEAYNEKLSRERAASVRTYLTTKGVAANKLTSEGYGELRPIA 455
Query: 136 YGHDEDAYAKNRRAIVFLKGCR 157
+NRR + L+ R
Sbjct: 456 TNKTAAGRQQNRRVEIKLEKDR 477
>gi|89889933|ref|ZP_01201444.1| putative outer membrane protein, ompA family [Flavobacteria
bacterium BBFL7]
gi|89518206|gb|EAS20862.1| putative outer membrane protein, ompA family [Flavobacteria
bacterium BBFL7]
Length = 457
Score = 90.6 bits (223), Expect = 6e-17, Method: Composition-based stats.
Identities = 37/133 (27%), Positives = 57/133 (42%), Gaps = 5/133 (3%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL-GSWLEK 78
GI +L + E Q++ + + FDT +I+ +VLS++ +
Sbjct: 325 GIASLAGCPKPAAPTVEEQEQLNQYAKT----ILFDTGKATIKAESAKVLSDITAILKKY 380
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
F I+GH D +GS + L RA V NY VA GI R+ YG+ P
Sbjct: 381 PTAKFSIDGHTDSVGSAKLNQRLSDSRANEVKNYLVANGIDEFRLSSVGYGEARPVADNK 440
Query: 139 DEDAYAKNRRAIV 151
+ A+NRR +
Sbjct: 441 TKTGRAQNRRVEI 453
>gi|26988234|ref|NP_743659.1| OmpA/MotB domain protein [Pseudomonas putida KT2440]
gi|24982975|gb|AAN67123.1|AE016341_6 OmpA family protein [Pseudomonas putida KT2440]
Length = 263
Score = 90.6 bits (223), Expect = 6e-17, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 61/145 (42%), Gaps = 2/145 (1%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
A + + +D D +I+ LN + GD V FD + ++ ++
Sbjct: 105 ASAQRAQAKLDARDAQIAKLQDSLNAKQTDRGTLVTFGD-VLFDFNKAELKSNAYPNITK 163
Query: 72 LGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
L + E + ++EG+ D +GS N + L RRA +V V G+ +R+ YGK
Sbjct: 164 LAQFLQENPERKVIVEGYTDSVGSANYNQTLSERRANSVRMALVRAGVDPARIVSQGYGK 223
Query: 131 EMPSVYGHDEDAYAKNRRAIVFLKG 155
E P A+NRR V +
Sbjct: 224 EYPVADNSSNSGRAQNRRVEVTISN 248
>gi|121533429|ref|ZP_01665257.1| OmpA/MotB domain protein [Thermosinus carboxydivorans Nor1]
gi|121307988|gb|EAX48902.1| OmpA/MotB domain protein [Thermosinus carboxydivorans Nor1]
Length = 262
Score = 90.6 bits (223), Expect = 6e-17, Method: Composition-based stats.
Identities = 20/128 (15%), Positives = 43/128 (33%), Gaps = 5/128 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ + + + D+ F + ++P +++ + + + ++ GH D
Sbjct: 125 AGDIQTALTDDGLMIRIKDTALFASGRAELKPESLRLGTEIARMIAPLSQRVIVAGHTDN 184
Query: 92 LGSRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ R + I R+ V+ YG+ P E+ AKN
Sbjct: 185 MPINTPEFPSNWDLSTKRALNFMKYMLSQAEIKPERISVSGYGEYRPVASNDTEEGRAKN 244
Query: 147 RRAIVFLK 154
RR V +
Sbjct: 245 RRVEVLIM 252
>gi|30249028|ref|NP_841098.1| outer membrane protein [Nitrosomonas europaea ATCC 19718]
gi|30138645|emb|CAD84936.1| Bacterial outer membrane protein [Nitrosomonas europaea ATCC 19718]
Length = 220
Score = 90.6 bits (223), Expect = 6e-17, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 55/136 (40%), Gaps = 1/136 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFL 84
++ V+ + Q ++ + FDT S I+P +L + + L
Sbjct: 83 ENATAGTGVVVSQTPDNQLMLNIPSDISFDTGSAQIKPDFRPILDSFATSLLNNPGTRVT 142
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
I GH D GS + L + RA + Y +RG+ R+++ G P + A
Sbjct: 143 IVGHTDSTGSDAVNNPLSVNRAASTREYLASRGVPFQRIQIDGRGSYQPVASNNTAAGRA 202
Query: 145 KNRRAIVFLKGCRANT 160
KNRR +++ R T
Sbjct: 203 KNRRVEIYVSETRDET 218
>gi|223039024|ref|ZP_03609315.1| outer membrane fibronectin-binding protein [Campylobacter rectus
RM3267]
gi|222879663|gb|EEF14753.1| outer membrane fibronectin-binding protein [Campylobacter rectus
RM3267]
Length = 293
Score = 90.6 bits (223), Expect = 6e-17, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 1/130 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHD 80
+++D ++P V+ + + E+ V F SY I P ++ + + ++ E
Sbjct: 159 NDVDQCPNTPAGVVVDETGCEKVIFLRDLDVNFAFDSYKITPKYLEEIKKVAMFMGENPG 218
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++ GH D +G+ + L +RA AV G+SA ++ YG+ P +
Sbjct: 219 YRIVLSGHTDSVGTEAYNQKLSEKRANAVAKALEELGVSADKITAIGYGELKPIATNKTK 278
Query: 141 DAYAKNRRAI 150
+ A+NRR
Sbjct: 279 EGRAENRRVE 288
>gi|121533623|ref|ZP_01665450.1| OmpA/MotB domain protein [Thermosinus carboxydivorans Nor1]
gi|121307614|gb|EAX48529.1| OmpA/MotB domain protein [Thermosinus carboxydivorans Nor1]
Length = 262
Score = 90.6 bits (223), Expect = 6e-17, Method: Composition-based stats.
Identities = 20/128 (15%), Positives = 43/128 (33%), Gaps = 5/128 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ + + + D+ F + ++P +++ + + + ++ GH D
Sbjct: 125 AGDIQTALTDDGLMIRIKDTALFASGRAELKPESLRLGTEIARMIAPLPQRVIVAGHTDN 184
Query: 92 LGSRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ R + I R+ V+ YG+ P E+ AKN
Sbjct: 185 MPINTPEFPSNWDLSTVRALNFMKYMLSQAEIKPERISVSGYGEYRPVASNDTEEGRAKN 244
Query: 147 RRAIVFLK 154
RR V +
Sbjct: 245 RRVEVLIM 252
>gi|34556650|ref|NP_906465.1| CADF precursor [Wolinella succinogenes DSM 1740]
gi|34482364|emb|CAE09365.1| CADF PRECURSOR [Wolinella succinogenes]
Length = 341
Score = 90.6 bits (223), Expect = 6e-17, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 53/135 (39%), Gaps = 1/135 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
G D K P T N QE V F S I PA + + + +LE H
Sbjct: 202 GDGVTDDKDLCPGTPKNFKVNQEGCPIQYTFLVQFPFDSAEITPAYMDEVKDFALFLENH 261
Query: 80 D-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+EGH D GS + L +R+ AV + GI SR+ +G+E P
Sbjct: 262 KGVSAKLEGHTDSKGSDAYNKKLSAKRSNAVKEALIKLGIDKSRLSSEGFGEERPIADNA 321
Query: 139 DEDAYAKNRRAIVFL 153
++ KNRR +
Sbjct: 322 TDEGRQKNRRVEAII 336
>gi|77165507|ref|YP_344032.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707]
gi|76883821|gb|ABA58502.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707]
Length = 286
Score = 90.6 bits (223), Expect = 6e-17, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 2/125 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADE 91
LN + + ++GD + F+ S + +Q L L ++L+++ ++EGH D
Sbjct: 152 AELNAEKTERGYVLTLGD-ILFEVDSAELTSGGMQNLFRLVTFLKEYPDREVVVEGHTDS 210
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
GS ++ L RRA +V+ + V GI+ R+ YG+ P + KNRR +
Sbjct: 211 TGSAVYNMELSQRRADSVYLFLVNNGIAPDRIVAHGYGQGYPVAPNNTTAGRQKNRRVEI 270
Query: 152 FLKGC 156
+ G
Sbjct: 271 VILGA 275
>gi|237742042|ref|ZP_04572523.1| outer membrane porin F [Fusobacterium sp. 4_1_13]
gi|229429690|gb|EEO39902.1| outer membrane porin F [Fusobacterium sp. 4_1_13]
Length = 348
Score = 90.6 bits (223), Expect = 6e-17, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 2/111 (1%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALG 102
++ + FD Y +RP +VL NL L++ D F ++GH D S + L
Sbjct: 236 LLITLDSGILFDVDKYDLRPEAEEVLKNLAIVLKEADIKAFEVDGHTDSDASDKHNQILS 295
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA AV N+ ++GI+A + + YG+ P + KNRR + +
Sbjct: 296 ENRANAVKNFLTSQGITAE-ITIKGYGESRPIASNDTPEGKQKNRRVEIVI 345
>gi|254433641|ref|ZP_05047149.1| OmpA family protein [Nitrosococcus oceani AFC27]
gi|207089974|gb|EDZ67245.1| OmpA family protein [Nitrosococcus oceani AFC27]
Length = 293
Score = 90.6 bits (223), Expect = 6e-17, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 2/125 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADE 91
LN + + ++GD + F+ S + +Q L L ++L+++ ++EGH D
Sbjct: 159 AELNAEKTERGYVLTLGD-ILFEVDSAELTSGGMQNLFRLVTFLKEYPDREVVVEGHTDS 217
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
GS ++ L RRA +V+ + V GI+ R+ YG+ P + KNRR +
Sbjct: 218 TGSAVYNMELSQRRADSVYLFLVNNGIAPDRIVAHGYGQGYPVAPNNTTAGRQKNRRVEI 277
Query: 152 FLKGC 156
+ G
Sbjct: 278 VILGA 282
>gi|315122875|ref|YP_004063364.1| OmpA/MotB [Candidatus Liberibacter solanacearum CLso-ZC1]
gi|313496277|gb|ADR52876.1| OmpA/MotB [Candidatus Liberibacter solanacearum CLso-ZC1]
Length = 152
Score = 90.6 bits (223), Expect = 6e-17, Method: Composition-based stats.
Identities = 92/156 (58%), Positives = 121/156 (77%), Gaps = 8/156 (5%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+Y F+ILS TM+ SGI+N ++S+Q+QF+ SV D +FFD +SYS
Sbjct: 1 MKYIAFFLILSVATMVHASGINNNTESY--------DASMQQQFAQSVSDRIFFDINSYS 52
Query: 61 IRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA 120
IRP DIQVLS+LGSWLEK+ CDF+IEGH DE G+RNSS+ LGLRRA+ VF+YF+ARGI++
Sbjct: 53 IRPEDIQVLSSLGSWLEKNGCDFIIEGHTDEQGTRNSSLVLGLRRAHTVFDYFLARGINS 112
Query: 121 SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
SRMK+TSYGKE+P+V G+DE AY+KNRR ++ L+ C
Sbjct: 113 SRMKITSYGKEIPAVLGYDESAYSKNRRTVIVLQKC 148
>gi|19704459|ref|NP_604021.1| Outer membrane porin F [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|19714725|gb|AAL95320.1| Outer membrane porin F [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
Length = 315
Score = 90.6 bits (223), Expect = 6e-17, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALG 102
++ + FD Y +RP +VL NL L++ D F I+GH D S + L
Sbjct: 203 LLITLDSGILFDVDKYDVRPEAEEVLKNLVIVLKEADIKAFEIDGHTDSDASDEHNQVLS 262
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA AV N+ ++GI A + + YG+ P + KNRR + +
Sbjct: 263 ENRANAVKNFLTSQGIMAE-ITIKGYGESRPIASNDTPEGKQKNRRVEIVI 312
>gi|260467067|ref|ZP_05813247.1| peptidoglycan-associated lipoprotein [Mesorhizobium opportunistum
WSM2075]
gi|259029176|gb|EEW30472.1| peptidoglycan-associated lipoprotein [Mesorhizobium opportunistum
WSM2075]
Length = 168
Score = 90.6 bits (223), Expect = 6e-17, Method: Composition-based stats.
Identities = 52/155 (33%), Positives = 86/155 (55%), Gaps = 6/155 (3%)
Query: 8 IILSAITMMSISGIDNLDTKISSPD-----TVLNESSLQEQFSSSVGDSVFFDTSSYSIR 62
++++ + M++I+G + T S+ D + F+ ++GD +FFDT S SIR
Sbjct: 12 VMIALVAMLAIAGCASKKTPNSAADLGLNGAGAATPGSAQDFTVNIGDRIFFDTDSSSIR 71
Query: 63 PADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS 121
L+ W + ++EGHADE G+R ++ALG RRA A ++ V++G+++S
Sbjct: 72 ADAQTTLARQAQWLNQYKQYAIVVEGHADERGTREYNLALGARRAAAARDFLVSKGVASS 131
Query: 122 RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
R+K SYGKE P D +++NRRA+ L G
Sbjct: 132 RLKTISYGKERPVAVCDDISCWSQNRRAVTTLSGA 166
>gi|222086972|ref|YP_002545506.1| peptidoglycan-associated lipoprotein [Agrobacterium radiobacter
K84]
gi|221724420|gb|ACM27576.1| peptidoglycan-associated lipoprotein [Agrobacterium radiobacter
K84]
Length = 177
Score = 90.6 bits (223), Expect = 6e-17, Method: Composition-based stats.
Identities = 53/156 (33%), Positives = 77/156 (49%), Gaps = 7/156 (4%)
Query: 8 IILSAITMMSISGIDNLDTKISSP------DTVLNESSLQEQFSSSVGDSVFFDTSSYSI 61
I+++ +S++G + + + F+ +VGD +FFDT S SI
Sbjct: 20 IMIALFVGLSLAGCASKKGLPNDANGLGLNGAGSATPGSPQDFTVNVGDRIFFDTDSTSI 79
Query: 62 RPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA 120
R Q L W + +EGHADE G+R ++ALG RRA A +Y +RG+ A
Sbjct: 80 RSDASQTLDRQAQWLARYPNYAITVEGHADERGTREYNLALGARRAAATKDYLASRGVPA 139
Query: 121 SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
RMK SYGKE P D +++NRRA+ L G
Sbjct: 140 QRMKTISYGKERPVATCDDISCWSQNRRAVTVLNGA 175
>gi|256846250|ref|ZP_05551707.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_36A2]
gi|256718019|gb|EEU31575.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_36A2]
Length = 191
Score = 90.6 bits (223), Expect = 7e-17, Method: Composition-based stats.
Identities = 37/160 (23%), Positives = 72/160 (45%), Gaps = 8/160 (5%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKIS------SPDTVLNESSLQEQFSSSVGDSVFF 54
M + +F L A+ + +++ + I +LN + +E S+ F
Sbjct: 14 MLFLLVF-SLPALAVQALTTTQMRENSIRINALELKNGDILNSEAPKEMTIVLDERSLNF 72
Query: 55 DTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
D +++P +L N+ ++E+++ + I GH D +GS + L RRA +V +
Sbjct: 73 DFDKSNVKPQYYDLLKNIKEFVEQNNYEITIVGHTDSIGSNAYNFKLSRRRAESVKAKLL 132
Query: 115 ARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G+S R+ + + G+E P ++ A+NRR L
Sbjct: 133 EFGLSEDRIVGIEAMGEEQPIATNATKEGRAQNRRVEFKL 172
>gi|313500273|gb|ADR61639.1| OmpA/MotB domain protein [Pseudomonas putida BIRD-1]
Length = 263
Score = 90.6 bits (223), Expect = 7e-17, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 60/140 (42%), Gaps = 2/140 (1%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW- 75
+ + +D D +I+ LN + GD V FD + ++ ++ L +
Sbjct: 110 AKAKLDARDAQIAKLQDSLNAKQTDRGTLVTFGD-VLFDFNKAELKSNAYPNVTKLAQFL 168
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
E + ++EG+ D +GS N + L RRA +V V G+ +R+ YGKE P
Sbjct: 169 QENPERKVIVEGYTDSVGSANYNQTLSERRANSVRMALVRAGVDPARIVSQGYGKEYPVA 228
Query: 136 YGHDEDAYAKNRRAIVFLKG 155
A+NRR V +
Sbjct: 229 DNSSNSGRAQNRRVEVTISN 248
>gi|261856649|ref|YP_003263932.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
gi|261837118|gb|ACX96885.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
Length = 216
Score = 90.6 bits (223), Expect = 7e-17, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 55/123 (44%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
+T + + +++ F+T+S +++P + VL L + ++ +EG+ D
Sbjct: 90 NTGVEVQRQGDGIHLQAPEAITFNTNSATLKPQFMPVLQQLAQSVNQYPGTIVRVEGNTD 149
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + + L L RA +V + G+ +R++ YG P A+NRR
Sbjct: 150 STGSASYNQQLSLNRAQSVASALSQYGVPYNRIQAVGYGMTRPIASNATAAGRAQNRRVD 209
Query: 151 VFL 153
+ +
Sbjct: 210 ILI 212
>gi|330824570|ref|YP_004387873.1| OmpA/MotB domain-containing protein [Alicycliphilus denitrificans
K601]
gi|329309942|gb|AEB84357.1| OmpA/MotB domain protein [Alicycliphilus denitrificans K601]
Length = 219
Score = 90.6 bits (223), Expect = 7e-17, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 1/115 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FFD ++P L +L S ++ + + +I GH D +G+ + L +R
Sbjct: 105 VTYAADAFFDFDKSVLKPEGKAKLDDLVSKVKGINLEVIIAVGHTDSIGTDAYNQKLSVR 164
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
RA AV Y V++GI +R+ G++ P ++ AKNRR + + G R N
Sbjct: 165 RAEAVKAYLVSKGIEKNRVYTEGKGEKQPIADNKTKEGRAKNRRVEIEVVGTRTN 219
>gi|300023927|ref|YP_003756538.1| peptidoglycan-associated lipoprotein [Hyphomicrobium denitrificans
ATCC 51888]
gi|299525748|gb|ADJ24217.1| peptidoglycan-associated lipoprotein [Hyphomicrobium denitrificans
ATCC 51888]
Length = 171
Score = 90.6 bits (223), Expect = 7e-17, Method: Composition-based stats.
Identities = 53/154 (34%), Positives = 73/154 (47%), Gaps = 1/154 (0%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M + + A T+ + + L S Q FS +VGD V+F T S
Sbjct: 9 MWLRLAAVSILAATVGACASNKELQPDALSGKYGAATPGSQRDFSQNVGDIVYFSTDSID 68
Query: 61 IRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
+ P Q LS W + IEGHADE G+R +IALG RRA V N+ GI+
Sbjct: 69 LTPEAQQTLSKQAQWLQQYSQYAITIEGHADERGTREYNIALGARRATTVRNFLSQHGIN 128
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+R++ SYGKE P +D +++NRRA L
Sbjct: 129 GARIRTISYGKERPVAVCNDISCWSQNRRAQTVL 162
>gi|326386301|ref|ZP_08207925.1| OmpA/MotB [Novosphingobium nitrogenifigens DSM 19370]
gi|326209526|gb|EGD60319.1| OmpA/MotB [Novosphingobium nitrogenifigens DSM 19370]
Length = 229
Score = 90.6 bits (223), Expect = 7e-17, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 54/130 (41%), Gaps = 1/130 (0%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-F 83
K + + + ++ V FDT S I+P L + L ++
Sbjct: 86 KEKTAGSGVDVKSVDDGQAILVNLPSGVTFDTDSTVIKPGFRDTLDKVADSLNRYPNSLI 145
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
+ GH D GS + L RA V +Y ++G+S++R++ T +GK P +
Sbjct: 146 DVYGHTDSTGSDAYNQTLSENRARVVADYLSSKGVSSARIRSTGFGKTQPVASNDTPEGR 205
Query: 144 AKNRRAIVFL 153
A NRR + +
Sbjct: 206 AANRRVEIKI 215
>gi|254302309|ref|ZP_04969667.1| OmpA family outer membrane protein [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148322501|gb|EDK87751.1| OmpA family outer membrane protein [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 189
Score = 90.2 bits (222), Expect = 7e-17, Method: Composition-based stats.
Identities = 33/155 (21%), Positives = 68/155 (43%), Gaps = 7/155 (4%)
Query: 6 IFIILSAITMMSISGIDNLDTKISSPD------TVLNESSLQEQFSSSVGDSVFFDTSSY 59
+I S + +++ + I +LN + +E ++ FD
Sbjct: 16 FLLIFSLPALAALTTTQMRENSIRINALELKNIDILNSEAPKEMTIVLDERALNFDFDKS 75
Query: 60 SIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
+++P +L N+ ++E+++ + I GH D +GS + L RRA +V + G++
Sbjct: 76 NVKPEYYDLLKNIKEFVEQNNYEITIVGHTDSIGSNAYNFKLSRRRAESVKAKLLEFGLT 135
Query: 120 ASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
R+ + + G+E P ++ A+NRR L
Sbjct: 136 EDRIVGIEAMGEEQPIATNETKEGRAQNRRVEFKL 170
>gi|13473329|ref|NP_104896.1| peptidoglycan-associated lipoprotein precursor [Mesorhizobium loti
MAFF303099]
gi|22653894|sp|Q98F85|OMP16_RHILO RecName: Full=Outer membrane lipoprotein omp16 homolog; Flags:
Precursor
gi|14024078|dbj|BAB50682.1| mll3887 [Mesorhizobium loti MAFF303099]
Length = 168
Score = 90.2 bits (222), Expect = 8e-17, Method: Composition-based stats.
Identities = 51/155 (32%), Positives = 86/155 (55%), Gaps = 6/155 (3%)
Query: 8 IILSAITMMSISGIDNLDTKISSPD-----TVLNESSLQEQFSSSVGDSVFFDTSSYSIR 62
++++ + M++I+G + T ++ D + F+ ++GD +FFDT S SIR
Sbjct: 12 VMIALVAMLAIAGCASKKTPNNAADLGLNGAGAATPGSAQDFTVNIGDRIFFDTDSSSIR 71
Query: 63 PADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS 121
L+ W + ++EGHADE G+R ++ALG RRA A ++ V++G+++S
Sbjct: 72 ADAQTTLARQAQWLNQYKQYAIVVEGHADERGTREYNLALGARRAAAARDFLVSKGVASS 131
Query: 122 RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
R+K SYGKE P D +++NRRA+ L G
Sbjct: 132 RLKTISYGKERPVAVCDDISCWSQNRRAVTTLSGA 166
>gi|241764514|ref|ZP_04762534.1| OmpA/MotB domain protein [Acidovorax delafieldii 2AN]
gi|241366050|gb|EER60654.1| OmpA/MotB domain protein [Acidovorax delafieldii 2AN]
Length = 212
Score = 90.2 bits (222), Expect = 8e-17, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FFD ++P L +L S ++ + + +I GH D +G+ + L +R
Sbjct: 97 VTYAADAFFDFDKSVLKPEGKAKLDDLVSKVKDINLEVIIAVGHTDSVGTDAYNQKLSVR 156
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
R+ AV Y V++GI +R+ G++ P ++ AKNRR + + G RA+
Sbjct: 157 RSEAVKAYLVSKGIEKNRVYTEGKGEKQPVADNKTKEGRAKNRRVEIEVVGTRAS 211
>gi|76809785|ref|YP_332623.1| ompA family protein [Burkholderia pseudomallei 1710b]
gi|76579238|gb|ABA48713.1| ompA family protein [Burkholderia pseudomallei 1710b]
Length = 316
Score = 90.2 bits (222), Expect = 8e-17, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 56/140 (40%), Gaps = 1/140 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
I N + +V SV F T Y+I PA +L++L + +
Sbjct: 175 AIKNKLAPSAQQTGTQVTEQPDGSLKLNVPSSVTFATDQYAITPAFTPLLNDLATTLNQN 234
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ G+ D GS + L RA +V N RG++A+R+ G P
Sbjct: 235 PQITASVVGYTDSTGSAAHNQTLSQNRAQSVVNALAQRGVAANRLSAQGMGASNPIADNA 294
Query: 139 DEDAYAKNRRAIVFLKGCRA 158
E A+NRR ++L+ +A
Sbjct: 295 TEAGRAQNRRVEIYLRAPQA 314
>gi|226314899|ref|YP_002774795.1| chemotaxis protein [Brevibacillus brevis NBRC 100599]
gi|226097849|dbj|BAH46291.1| probable chemotaxis protein [Brevibacillus brevis NBRC 100599]
Length = 260
Score = 90.2 bits (222), Expect = 8e-17, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 5/136 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ + L+ +E + +++ F + S ++ QV+ + L++ + IE
Sbjct: 125 SSALAELNLDYEETEEGLRIRLPETILFTSGSADLQAQGKQVVGTVAGVLKRFEHKVRIE 184
Query: 87 GHAD----ELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDED 141
G+ D S S+ L RA +V A + ASR V G+ P V + +
Sbjct: 185 GYTDDVPISRSSFQSNWELSSARAISVMREMVDANSLPASRFTVAGLGEYKPLVDNSNAE 244
Query: 142 AYAKNRRAIVFLKGCR 157
AKNRR + + G +
Sbjct: 245 NRAKNRRVEIVILGEK 260
>gi|296328184|ref|ZP_06870715.1| outer membrane porin F [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
gi|296154696|gb|EFG95482.1| outer membrane porin F [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
Length = 394
Score = 90.2 bits (222), Expect = 8e-17, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALG 102
++ + FD Y +RP +VL NL L++ D F I+GH D S + L
Sbjct: 282 LLITLDSGILFDVDKYDVRPEAEEVLKNLVIVLKEADIKAFEIDGHTDSDASDEHNQVLS 341
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA AV N+ ++GI A + + YG+ P + KNRR + +
Sbjct: 342 ENRANAVKNFLTSQGIMAE-ITIKGYGESRPIASNDTPEGKQKNRRVEIVI 391
>gi|78224724|ref|YP_386471.1| OmpA/MotB [Geobacter metallireducens GS-15]
gi|78195979|gb|ABB33746.1| OmpA/MotB [Geobacter metallireducens GS-15]
Length = 193
Score = 90.2 bits (222), Expect = 8e-17, Method: Composition-based stats.
Identities = 48/191 (25%), Positives = 81/191 (42%), Gaps = 38/191 (19%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLD-------------TKISSPDTVLNESSLQEQFSSS 47
M+ T ++ + +G + + ++P +E ++
Sbjct: 1 MRKCTFGLVALLCFGLVAAGCAKKEMVKPEEAVPPVAAPQPTTPAKPAAPPVKEEPIAAQ 60
Query: 48 -----------------------VGDSVFFDTSSYSIRPADIQVLSNLGSW--LEKHDCD 82
D +FFD S+ + A +LS + ++ +
Sbjct: 61 PIPEAPVKTETLQPATALDTVTATLDRIFFDFDSFVLSQAARDILSKNAEYLLKKQPNAR 120
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
LIEGH DE GS ++ALG +RA A +Y V G++A+R+ + SYG+E P GH E+A
Sbjct: 121 VLIEGHCDERGSDEYNLALGEKRAKAARDYLVTLGVAANRLSIISYGEEKPLDPGHTEEA 180
Query: 143 YAKNRRAIVFL 153
+AKNRRA +
Sbjct: 181 WAKNRRAEFLI 191
>gi|118616129|ref|YP_904461.1| outer membrane protein a OmpA [Mycobacterium ulcerans Agy99]
gi|118568239|gb|ABL02990.1| outer membrane protein a OmpA [Mycobacterium ulcerans Agy99]
Length = 332
Score = 90.2 bits (222), Expect = 8e-17, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 54/140 (38%), Gaps = 1/140 (0%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
+ + G T + P + LQ ++ G ++ F S+ P +VL+ +
Sbjct: 193 IEVKGQPAGSTPPTGPAATGACADLQAAVTALTGGAIAFGNDGVSLTPDSNKVLTQVVDK 252
Query: 76 LEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
L + G+ D GS +I L +RA V ++ VA G++ + G P
Sbjct: 253 LRACPDAKVTVNGYTDNSGSEGLNIPLSAQRAQTVADFLVAHGVATDHITAKGLGSANPI 312
Query: 135 VYGHDEDAYAKNRRAIVFLK 154
+ KNRR + +
Sbjct: 313 ASNDTAEGRIKNRRVEIVVS 332
>gi|256425383|ref|YP_003126036.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
gi|256040291|gb|ACU63835.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
Length = 449
Score = 90.2 bits (222), Expect = 8e-17, Method: Composition-based stats.
Identities = 32/144 (22%), Positives = 56/144 (38%), Gaps = 1/144 (0%)
Query: 11 SAITMMSISGID-NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVL 69
+A T + SG + DT T + + + ++ F+ + SI+ + L
Sbjct: 305 AAGTKVDGSGCELPKDTMPKQVITKVTITEDDRRLIKDAIQNLEFEFAKSSIKASSYPSL 364
Query: 70 SNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
+ L + GH D +G+ ++AL RA +V Y V G + S+++ YG
Sbjct: 365 DRVAEMLRTKGFSLKLGGHTDNVGNATKNMALSKDRAESVKQYLVEHGANPSKIEAVGYG 424
Query: 130 KEMPSVYGHDEDAYAKNRRAIVFL 153
P KNRR +
Sbjct: 425 ANQPIASNKTAAGRQKNRRVEFTI 448
>gi|292493578|ref|YP_003529017.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4]
gi|291582173|gb|ADE16630.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4]
Length = 279
Score = 90.2 bits (222), Expect = 9e-17, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 58/149 (38%), Gaps = 4/149 (2%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS 70
+ ++ +I+ + + + ++ QE + D V F + S + + VL
Sbjct: 109 AMTSLKAITEEVRITLQPLIDEDLVRLRQGQEWLEVEINDRVLFTSGSAKLEAEAVPVLK 168
Query: 71 NLGSWLEKHDCDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVT 126
L L + +EG D + S+ L RA +V + F G+S +RM
Sbjct: 169 KLAKILRRFPNPIQVEGFTDNVPISTAVFPSNWELSSARAASVVHLFDRFGVSPARMAAI 228
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
YG+ P + +NRR + + G
Sbjct: 229 GYGQYRPVADNSTPEGRRRNRRVALVILG 257
>gi|298292993|ref|YP_003694932.1| peptidoglycan-associated lipoprotein [Starkeya novella DSM 506]
gi|296929504|gb|ADH90313.1| peptidoglycan-associated lipoprotein [Starkeya novella DSM 506]
Length = 164
Score = 90.2 bits (222), Expect = 9e-17, Method: Composition-based stats.
Identities = 52/146 (35%), Positives = 74/146 (50%), Gaps = 2/146 (1%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
+ +++ + + ++F SVGD VFFD+ + P
Sbjct: 15 FIVGFALLAAA-CARNPMDGAGQALGSAPPGSPQEFVVSVGDRVFFDSDQTDLTPQAQAT 73
Query: 69 LSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
L WL + F IEGHADE G+R +IALG RRA +V +Y V RG+SASRM+ S
Sbjct: 74 LDKQAQWLNHYGKYTFTIEGHADERGTREYNIALGARRAQSVRDYLVQRGVSASRMRTIS 133
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFL 153
YGKE P +D +++NRRA+ L
Sbjct: 134 YGKERPVAVCNDISCWSQNRRAVTVL 159
>gi|255037862|ref|YP_003088483.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
18053]
gi|254950618|gb|ACT95318.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
Length = 525
Score = 90.2 bits (222), Expect = 9e-17, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 1/105 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLG-SWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
+++FF T ++R L+ + S E + GH D GS ++ L RA
Sbjct: 418 NNIFFATGKATLREESFPELNRIAISMTENKTLAIELGGHTDNTGSAEFNVNLSQERADT 477
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V Y + +GI R+ YG+ P + +NRR +
Sbjct: 478 VREYLIGKGIEPDRIASKGYGETKPVATNDTPEGQQQNRRVEFKI 522
>gi|149202853|ref|ZP_01879824.1| peptidoglycan-associated lipoprotein [Roseovarius sp. TM1035]
gi|149143399|gb|EDM31435.1| peptidoglycan-associated lipoprotein [Roseovarius sp. TM1035]
Length = 172
Score = 90.2 bits (222), Expect = 9e-17, Method: Composition-based stats.
Identities = 53/166 (31%), Positives = 77/166 (46%), Gaps = 13/166 (7%)
Query: 1 MQYSTIFIILSAITMMSISG------------IDNLDTKISSPDTVLNESSLQEQFSSSV 48
M Y + +IL A ++ ++N + + + F +V
Sbjct: 1 MTYLSKTLILCAGLALAACTNPNRFDDGSAVDLNNGANSGAGFAGSAQDPTSPAYFQQTV 60
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
GD V F ++ L +W D +IEGHADE G+R ++ALG RRA
Sbjct: 61 GDRVLFAVDQSTLGSDAQATLDGQANWLTTNRDFTAVIEGHADEQGTREYNLALGARRAN 120
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV Y + RG+S +R++V SYGKE P +E YAKNRRA+ L
Sbjct: 121 AVQEYLIGRGVSPNRLRVVSYGKERPIEICSNEACYAKNRRAVTVL 166
>gi|71083303|ref|YP_266022.1| OmpA family protein [Candidatus Pelagibacter ubique HTCC1062]
gi|71062416|gb|AAZ21419.1| OmpA family [Candidatus Pelagibacter ubique HTCC1062]
Length = 159
Score = 90.2 bits (222), Expect = 9e-17, Method: Composition-based stats.
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 4/156 (2%)
Query: 1 MQYSTIF---IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS 57
M S I ++ +++ + T V + E +S V D VFF T+
Sbjct: 1 MNLSKILKNGFLIILASLVLTACATKKTTTGQMQGDVYTGTDSVEYLASGVPDRVFFATN 60
Query: 58 SYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
+ A + L +W + D + ++EGHADE G+R ++ALG RRA + +Y +
Sbjct: 61 ETVLTTASRETLRKQAAWLRKNSDINVVLEGHADERGTREYNLALGERRANSAKDYLMTY 120
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
GIS+ R+ V SYGKE P G + A++KNRR++
Sbjct: 121 GISSERISVLSYGKERPVDSGSNPLAWSKNRRSVTV 156
>gi|121610060|ref|YP_997867.1| OmpA/MotB domain-containing protein [Verminephrobacter eiseniae
EF01-2]
gi|121554700|gb|ABM58849.1| OmpA/MotB domain protein [Verminephrobacter eiseniae EF01-2]
Length = 242
Score = 90.2 bits (222), Expect = 9e-17, Method: Composition-based stats.
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 1/132 (0%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EG 87
+ + + + FFD I+P L +L S ++ + + +I G
Sbjct: 110 TPATASASTPAPAVATKVTYATDAFFDFDKSVIKPEGKAKLDDLVSKVKDINLEVIIAVG 169
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
H D +G+ + L +RRA AV Y V++GI +R+ G++ P + AKNR
Sbjct: 170 HTDSVGTDAYNQRLSVRRAEAVKAYLVSKGIEKNRVYTEGKGEKQPVADNKTSEGRAKNR 229
Query: 148 RAIVFLKGCRAN 159
R + + G RA+
Sbjct: 230 RVEIEVVGTRAS 241
>gi|229522162|ref|ZP_04411579.1| outer membrane protein A precursor [Vibrio cholerae TM 11079-80]
gi|229341087|gb|EEO06092.1| outer membrane protein A precursor [Vibrio cholerae TM 11079-80]
Length = 321
Score = 90.2 bits (222), Expect = 9e-17, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 1/134 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKH 79
++ T+ + + + ++ + F+ DS F T+S ++PA +Q L + + +
Sbjct: 179 VEQRPTEPAPVAAPVEKVAVTKTFTFQHLDSSTFATASAELKPATVQKLDKIVGYLNQYP 238
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ GH D GS + L RRA AV A+GI ASR+ G+ P
Sbjct: 239 QAKVEVVGHTDSTGSEAYNQKLSERRAQAVAKALEAQGIDASRISAKGLGESSPIASNAT 298
Query: 140 EDAYAKNRRAIVFL 153
+ KNRR + +
Sbjct: 299 AEGREKNRRVELVI 312
>gi|167032120|ref|YP_001667351.1| OmpA/MotB domain-containing protein [Pseudomonas putida GB-1]
gi|166858608|gb|ABY97015.1| OmpA/MotB domain protein [Pseudomonas putida GB-1]
Length = 263
Score = 90.2 bits (222), Expect = 9e-17, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 2/145 (1%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
A + + +D D +I+ LN + GD V FD + ++ ++
Sbjct: 105 ASAQRAQAKLDARDAQIAKLQDSLNAKQTDRGTLVTFGD-VLFDFNKAELKSNAYPNITK 163
Query: 72 LGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
L + E + ++EG+ D +GS N + +L RRA +V V G+ +R+ YGK
Sbjct: 164 LAQFLQENPERKVIVEGYTDSVGSANYNQSLSERRAGSVRMALVRAGVDPARIVSQGYGK 223
Query: 131 EMPSVYGHDEDAYAKNRRAIVFLKG 155
E P A+NRR V +
Sbjct: 224 EYPVADNGSNSGRAQNRRVEVTISN 248
>gi|197284482|ref|YP_002150354.1| peptidoglycan-associated outer membrane lipoprotein [Proteus
mirabilis HI4320]
gi|194681969|emb|CAR41402.1| peptidoglycan-associated lipoprotein [Proteus mirabilis HI4320]
Length = 165
Score = 90.2 bits (222), Expect = 9e-17, Method: Composition-based stats.
Identities = 54/164 (32%), Positives = 81/164 (49%), Gaps = 12/164 (7%)
Query: 1 MQYSTIF----IILSAITMMSISG------IDNLDTKISSPDTVLNESSLQEQFSSSVG- 49
MQ + +F + L + + + S D + + E ++Q
Sbjct: 1 MQLNKVFKGLMLALPLVAVAACSSNKNDDQTDTSNNVPVTEQGPTAEELARQQLEQLKQT 60
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYA 108
+ V+F Y + Q+L ++L + IEGHADE G+ +IALG RRA A
Sbjct: 61 NIVYFGFDKYDVTSEYAQLLDAHAAFLRANPSVRITIEGHADERGTPEYNIALGERRANA 120
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
V Y +G+SA ++ + SYGKE P+V GHDE AYAKNRRA++
Sbjct: 121 VKMYLQGKGVSADQLAIVSYGKEKPAVLGHDEAAYAKNRRAVLV 164
>gi|229523853|ref|ZP_04413258.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
cholerae bv. albensis VL426]
gi|229337434|gb|EEO02451.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
cholerae bv. albensis VL426]
Length = 172
Score = 89.9 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 15/165 (9%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQF--------------SSSV 48
++ I L + + + S D+ S + + +
Sbjct: 7 LKSLLIALPVLAVTACSSSDDAANSGSQTNQSAVSTVDSNGLNAQGQLTEQELKEQALRE 66
Query: 49 GDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
+++F + +I +L+ + ++ IEGHADE G+ +IALG RRA
Sbjct: 67 NQTIYFAFDNATIASDYEAMLAAHAAYLVKNPSLRVTIEGHADERGTPEHNIALGERRAQ 126
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
AV Y A G+ A ++ + SYG+E P V G E+AYAKNRRA++
Sbjct: 127 AVAKYLEALGVQAGQLSIVSYGEEKPLVLGQSEEAYAKNRRAVLV 171
>gi|169794682|ref|YP_001712475.1| putative lipoprotein precursor [Acinetobacter baumannii AYE]
gi|213157946|ref|YP_002320744.1| OmpA/MotB [Acinetobacter baumannii AB0057]
gi|215482270|ref|YP_002324452.1| Outer membrane protein A precursor [Acinetobacter baumannii
AB307-0294]
gi|239504137|ref|ZP_04663447.1| Outer membrane protein A precursor [Acinetobacter baumannii AB900]
gi|260554079|ref|ZP_05826342.1| outer membrane protein A [Acinetobacter sp. RUH2624]
gi|260558111|ref|ZP_05830321.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii ATCC
19606]
gi|301345841|ref|ZP_07226582.1| Outer membrane protein A precursor [Acinetobacter baumannii AB056]
gi|301512157|ref|ZP_07237394.1| Outer membrane protein A precursor [Acinetobacter baumannii AB058]
gi|301597153|ref|ZP_07242161.1| Outer membrane protein A precursor [Acinetobacter baumannii AB059]
gi|332851565|ref|ZP_08433542.1| OmpA family protein [Acinetobacter baumannii 6013150]
gi|332867764|ref|ZP_08437836.1| OmpA family protein [Acinetobacter baumannii 6013113]
gi|332873499|ref|ZP_08441450.1| OmpA family protein [Acinetobacter baumannii 6014059]
gi|169147609|emb|CAM85470.1| putative lipoprotein precursor [Acinetobacter baumannii AYE]
gi|193078408|gb|ABO13390.2| putative lipoprotein precursor [Acinetobacter baumannii ATCC 17978]
gi|213057106|gb|ACJ42008.1| OmpA/MotB [Acinetobacter baumannii AB0057]
gi|213987976|gb|ACJ58275.1| Outer membrane protein A precursor [Acinetobacter baumannii
AB307-0294]
gi|260404818|gb|EEW98325.1| outer membrane protein A [Acinetobacter sp. RUH2624]
gi|260408384|gb|EEX01692.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii ATCC
19606]
gi|332729910|gb|EGJ61242.1| OmpA family protein [Acinetobacter baumannii 6013150]
gi|332733770|gb|EGJ64922.1| OmpA family protein [Acinetobacter baumannii 6013113]
gi|332738324|gb|EGJ69200.1| OmpA family protein [Acinetobacter baumannii 6014059]
Length = 159
Score = 89.9 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 63/157 (40%), Gaps = 4/157 (2%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESS---LQEQFSSSVGDSVFFDTS 57
M ++ + A+ ++++G + +L + E ++ + + + FD +
Sbjct: 1 MNTRSLKLSFIALLCIALAGCLSFGPLKYRQVKMLKKEGFVLTNEGWTLGLPERLLFDFN 60
Query: 58 SYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
+++ + L+ L + + I GH D++G+ + L RA +V N F+
Sbjct: 61 DATLKQSHEAELTRLANQLNKYDLNKLKIVGHTDDVGNPEYNQKLSEERAQSVANLFLTH 120
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G + V G P V + A NRR + +
Sbjct: 121 GFKKENIYVIGRGSTQPYVPNTTNENRAINRRVAIVI 157
>gi|218783104|ref|YP_002434422.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01]
gi|218764488|gb|ACL06954.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01]
Length = 217
Score = 89.9 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 32/156 (20%), Positives = 63/156 (40%), Gaps = 2/156 (1%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQ-FSSSVGDSVFFDTSSY 59
M + ++ + + G + +QE ++ +S+ F +S
Sbjct: 59 MGKGALIGSVAGAAVGTAVGHKMGKQAQELEQIPNTQVEVQEDKVVVTMDNSILFAVNSS 118
Query: 60 SIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI 118
+++PA L ++ + + D +++GH D G + L RRA V N ++ G+
Sbjct: 119 TVQPAAQGTLRDIAQVMVKYPDTQIMVKGHTDSTGGEEYNQQLSERRANVVKNILISYGV 178
Query: 119 SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
A R+ G+ MP D A NRR + ++
Sbjct: 179 PAHRITAIGLGEVMPIASNDTPDGRAMNRRVEIEVR 214
>gi|239832781|ref|ZP_04681110.1| peptidoglycan-associated lipoprotein [Ochrobactrum intermedium LMG
3301]
gi|239825048|gb|EEQ96616.1| peptidoglycan-associated lipoprotein [Ochrobactrum intermedium LMG
3301]
Length = 183
Score = 89.9 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 6/155 (3%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDT-----VLNESSLQEQFSSSVGDSVFFDTSSYSIR 62
I ++ ++++G + ++ + F+ +VGD +FFD S IR
Sbjct: 27 IAIALFMSLAVAGCASKKNLPNNAGDLGLGAGAATPGSAQDFTVNVGDRIFFDLDSSLIR 86
Query: 63 PADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS 121
Q LS W IEGHADE G+R ++ALG RRA A ++ +RG+ +
Sbjct: 87 ADAQQTLSKQAQWLQRYPQYSITIEGHADERGTREYNLALGQRRAAATRDFLASRGVPTN 146
Query: 122 RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
RM+ SYG E P + +++NRRA+ L G
Sbjct: 147 RMRTISYGNERPVAVCDADSCWSQNRRAVTVLNGA 181
>gi|289661910|ref|ZP_06483491.1| PAL family outer membrane lipoprotein [Xanthomonas campestris pv.
vasculorum NCPPB702]
gi|289667001|ref|ZP_06488076.1| PAL family outer membrane lipoprotein [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 172
Score = 89.9 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 16/168 (9%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQ---------------EQFS 45
M ST +++S +++ ++G + P T S + +
Sbjct: 1 MNKSTRVLLVSLLSVAVLAGCSKKVKETPPPATDTTAGSSVPTGPSTSGLYGPGDLDTDA 60
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLR 104
V+FD S++P +++ +L ++G+ DE GSR ++ LG R
Sbjct: 61 CLRQRVVYFDLDQDSLKPEFQAIMACHAKYLRDRPSSRITLQGNTDERGSREYNMGLGER 120
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
R AV + A G SAS++ V SYG+E P E +++NRR +
Sbjct: 121 RGNAVSSSLQAAGGSASQLTVVSYGEERPVCTESGESCWSQNRRVEIV 168
>gi|85858897|ref|YP_461099.1| outer membrane OmpA family protein [Syntrophus aciditrophicus SB]
gi|85721988|gb|ABC76931.1| outer membrane OmpA family protein [Syntrophus aciditrophicus SB]
Length = 180
Score = 89.9 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 1/127 (0%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIE 86
+ + + V FDT+S IRP + + L+++ +E
Sbjct: 45 ALGASDAAAVTREGNLLAVTFKGDVTFDTNSAEIRPDLYFEIDRVAGVLKQYPDTFIRVE 104
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
G+ D GS ++ L RRA AV N V RG++ +R++V +G+ MP E KN
Sbjct: 105 GYTDSKGSDTYNMDLSKRRANAVKNLLVQRGVAENRIEVVGFGETMPVATNDTEAGRQKN 164
Query: 147 RRAIVFL 153
RR + +
Sbjct: 165 RRVEIKI 171
>gi|289548706|ref|YP_003473694.1| OmpA/MotB domain protein [Thermocrinis albus DSM 14484]
gi|289182323|gb|ADC89567.1| OmpA/MotB domain protein [Thermocrinis albus DSM 14484]
Length = 243
Score = 89.9 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 4/115 (3%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSIALGL 103
+ + + FD+ S I+P +L + L +EGH D + S+ L
Sbjct: 121 LQERLLFDSGSADIKPQFYPILDKIAELLNSIPNPVEVEGHTDNIPISTGRFPSNWELST 180
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
RA +V YF+A+G+S R+K + Y P + +NRR + + +
Sbjct: 181 ARASSVVRYFIAKGVSPDRLKASGYADTRPIASNATPEGREQNRRVEIVIINIKG 235
>gi|257462480|ref|ZP_05626892.1| Outer membrane protein [Fusobacterium sp. D12]
Length = 217
Score = 89.9 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+T + E S + V F + S I L+++ ++ + L++GH D
Sbjct: 90 NTAVQVQRDGENISLYLPGGVTFASDSAQISGNFYSALNSIAQVLVQYPETQILVQGHTD 149
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS ++ L RRA +V Y + +G++++R+ +G P + NRR
Sbjct: 150 STGSFQHNMDLSNRRANSVKQYLIGQGVASNRLTSQGFGPNNPVADNSTPEGRQMNRRVE 209
Query: 151 VFL 153
+ +
Sbjct: 210 IKI 212
>gi|91204944|ref|YP_537299.1| peptidoglycan-associated lipoprotein precursor [Rickettsia bellii
RML369-C]
gi|157827728|ref|YP_001496792.1| peptidoglycan-associated lipoprotein precursor [Rickettsia bellii
OSU 85-389]
gi|91068488|gb|ABE04210.1| Peptidoglycan-associated lipoprotein precursor [Rickettsia bellii
RML369-C]
gi|157803032|gb|ABV79755.1| Peptidoglycan-associated lipoprotein precursor [Rickettsia bellii
OSU 85-389]
Length = 155
Score = 89.9 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 2/154 (1%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ + I + + A+ +++ N S E+S+ + F G++V+F +S +
Sbjct: 1 MKITKITLAVLALFVLAGCN-KNKRASHSCAMNQSEETSIMKDFEKQAGNAVWFAFNSSA 59
Query: 61 IRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
+ + L W +EGH D+ G+R ++ALG RRA + +GI
Sbjct: 60 LSEKAKEELQRQACWLSRHPHVKATVEGHCDDRGTREYNLALGERRAQKAAEFLRHKGIE 119
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
R+ SYGK+ ++ G+ E+A+A NRRA+ +
Sbjct: 120 HHRVSTISYGKDRLAMMGNTEEAHAYNRRAVTVV 153
>gi|229515215|ref|ZP_04404675.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
cholerae TMA 21]
gi|229347920|gb|EEO12879.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
cholerae TMA 21]
Length = 172
Score = 89.9 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 15/165 (9%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQF--------------SSSV 48
++ I L + + + S D+ S + + +
Sbjct: 7 LKSLLIALPVLAVTACSSSDDAANSGSQTNQTAVSTVDSNGLNAQGQLTEQELKEQALRE 66
Query: 49 GDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
+++F + +I +L+ + ++ IEGHADE G+ +IALG RRA
Sbjct: 67 NQTIYFAFDNATIASDYEAMLAAHAAYLVKNPSLRVTIEGHADERGTPEYNIALGERRAQ 126
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
AV Y A G+ A ++ + SYG+E P V G E+AYAKNRRA++
Sbjct: 127 AVAKYLEALGVQAGQLSIVSYGEEKPLVLGQSEEAYAKNRRAVLV 171
>gi|94311184|ref|YP_584394.1| OmpA/MotB [Cupriavidus metallidurans CH34]
gi|93355036|gb|ABF09125.1| putative outer membrane lipoprotein [Cupriavidus metallidurans
CH34]
Length = 167
Score = 89.9 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/153 (18%), Positives = 60/153 (39%), Gaps = 5/153 (3%)
Query: 6 IFIILSAITMMSISGIDNLDTKISSPDTVLNESS----LQEQFSSSVGDSVFFDTSSYSI 61
+ L+ + +++SG + K++ + ++ + + D V F ++
Sbjct: 12 LLTTLAGLGALALSGCASPAHKLTPAQIAVLKNQGFMLTGNGWELVMPDKVLFGFDDDTV 71
Query: 62 RPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA 120
L+ + L D ++GH D +G+ + L +RRA AV + G +
Sbjct: 72 SAEQQNALARVARTLRDAGIDALRVDGHTDNVGTIEYNQQLSMRRAEAVARVLLTCGFAR 131
Query: 121 SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ V +GK P A+NRR + +
Sbjct: 132 DHLDVRGFGKTRPIADNGTALGRAENRRVAIIV 164
>gi|330807884|ref|YP_004352346.1| OmpA/MotB, OmpA family protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327375992|gb|AEA67342.1| Conserved hypothetical protein; putative OmpA/MotB, putative OmpA
family protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 241
Score = 89.9 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 51/132 (38%), Gaps = 1/132 (0%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-D 82
+ + V E+ E + + V FD + L L L +
Sbjct: 109 VPQYPAGAPPVEPEAPASEVITLNDAGKVLFDFDKSDLTAEARSQLDGLMGKLSHANVAS 168
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
+ GH D +GS + L RRA +V Y + +G++ ++ G+ P ++
Sbjct: 169 IRVVGHTDSVGSDAYNQGLSERRASSVVEYLLTQGLAPDKLTSEGKGESEPVADNETDEG 228
Query: 143 YAKNRRAIVFLK 154
A+NRR + ++
Sbjct: 229 RAQNRRVELHIQ 240
>gi|15641837|ref|NP_231469.1| peptidoglycan-associated lipoprotein [Vibrio cholerae O1 biovar El
Tor str. N16961]
gi|121585809|ref|ZP_01675603.1| peptidoglycan-associated lipoprotein [Vibrio cholerae 2740-80]
gi|121727622|ref|ZP_01680725.1| peptidoglycan-associated lipoprotein [Vibrio cholerae V52]
gi|147673661|ref|YP_001217371.1| peptidoglycan-associated lipoprotein [Vibrio cholerae O395]
gi|153214301|ref|ZP_01949318.1| peptidoglycan-associated lipoprotein [Vibrio cholerae 1587]
gi|153800452|ref|ZP_01955038.1| peptidoglycan-associated lipoprotein [Vibrio cholerae MZO-3]
gi|153819810|ref|ZP_01972477.1| peptidoglycan-associated lipoprotein [Vibrio cholerae NCTC 8457]
gi|153824298|ref|ZP_01976965.1| peptidoglycan-associated lipoprotein [Vibrio cholerae B33]
gi|153826235|ref|ZP_01978902.1| peptidoglycan-associated lipoprotein [Vibrio cholerae MZO-2]
gi|153828567|ref|ZP_01981234.1| peptidoglycan-associated lipoprotein [Vibrio cholerae 623-39]
gi|227081964|ref|YP_002810515.1| peptidoglycan-associated lipoprotein [Vibrio cholerae M66-2]
gi|229508068|ref|ZP_04397573.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
cholerae BX 330286]
gi|229511693|ref|ZP_04401172.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
cholerae B33]
gi|229518832|ref|ZP_04408275.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
cholerae RC9]
gi|229520296|ref|ZP_04409722.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
cholerae TM 11079-80]
gi|229529142|ref|ZP_04418532.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
cholerae 12129(1)]
gi|229607629|ref|YP_002878277.1| OmpA precursor [Vibrio cholerae MJ-1236]
gi|254285225|ref|ZP_04960190.1| peptidoglycan-associated lipoprotein [Vibrio cholerae AM-19226]
gi|254848921|ref|ZP_05238271.1| peptidoglycan-associated lipoprotein [Vibrio cholerae MO10]
gi|255745403|ref|ZP_05419352.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio cholera
CIRS 101]
gi|262169824|ref|ZP_06037515.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
cholerae RC27]
gi|297579354|ref|ZP_06941282.1| peptidoglycan-associated lipoprotein [Vibrio cholerae RC385]
gi|298498126|ref|ZP_07007933.1| peptidoglycan-associated lipoprotein [Vibrio cholerae MAK 757]
gi|9656362|gb|AAF94983.1| peptidoglycan-associated lipoprotein [Vibrio cholerae O1 biovar El
Tor str. N16961]
gi|121549947|gb|EAX59965.1| peptidoglycan-associated lipoprotein [Vibrio cholerae 2740-80]
gi|121630009|gb|EAX62416.1| peptidoglycan-associated lipoprotein [Vibrio cholerae V52]
gi|124115449|gb|EAY34269.1| peptidoglycan-associated lipoprotein [Vibrio cholerae 1587]
gi|124124078|gb|EAY42821.1| peptidoglycan-associated lipoprotein [Vibrio cholerae MZO-3]
gi|126509649|gb|EAZ72243.1| peptidoglycan-associated lipoprotein [Vibrio cholerae NCTC 8457]
gi|126518179|gb|EAZ75404.1| peptidoglycan-associated lipoprotein [Vibrio cholerae B33]
gi|146315544|gb|ABQ20083.1| peptidoglycan-associated lipoprotein [Vibrio cholerae O395]
gi|148875962|gb|EDL74097.1| peptidoglycan-associated lipoprotein [Vibrio cholerae 623-39]
gi|149740000|gb|EDM54175.1| peptidoglycan-associated lipoprotein [Vibrio cholerae MZO-2]
gi|150424497|gb|EDN16433.1| peptidoglycan-associated lipoprotein [Vibrio cholerae AM-19226]
gi|227009852|gb|ACP06064.1| peptidoglycan-associated lipoprotein [Vibrio cholerae M66-2]
gi|227013734|gb|ACP09944.1| peptidoglycan-associated lipoprotein [Vibrio cholerae O395]
gi|229332916|gb|EEN98402.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
cholerae 12129(1)]
gi|229342662|gb|EEO07654.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
cholerae TM 11079-80]
gi|229343521|gb|EEO08496.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
cholerae RC9]
gi|229351658|gb|EEO16599.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
cholerae B33]
gi|229355573|gb|EEO20494.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
cholerae BX 330286]
gi|229370284|gb|ACQ60707.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
cholerae MJ-1236]
gi|254844626|gb|EET23040.1| peptidoglycan-associated lipoprotein [Vibrio cholerae MO10]
gi|255737233|gb|EET92629.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio cholera
CIRS 101]
gi|262022058|gb|EEY40768.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
cholerae RC27]
gi|297536948|gb|EFH75781.1| peptidoglycan-associated lipoprotein [Vibrio cholerae RC385]
gi|297542459|gb|EFH78509.1| peptidoglycan-associated lipoprotein [Vibrio cholerae MAK 757]
gi|327484390|gb|AEA78797.1| 18K peptidoglycan-associated outer membrane lipoprotein;
Peptidoglycan-associated lipoprotein precursor; Outer
membrane protein P6; OmpA/MotB precursor [Vibrio
cholerae LMA3894-4]
Length = 172
Score = 89.9 bits (221), Expect = 1e-16, Method: Composition-based stats.
Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 15/165 (9%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQF--------------SSSV 48
++ I L + + + S D+ S + + +
Sbjct: 7 LKSLLIALPVLAVTACSSSDDAANSGSQTNQSAVSTVDSNGLNAQGQLTEQELKEQALRE 66
Query: 49 GDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
+++F + +I +L+ + ++ IEGHADE G+ +IALG RRA
Sbjct: 67 NQTIYFAFDNATIASDYEAMLAAHAAYLVKNPSLRVTIEGHADERGTPEYNIALGERRAQ 126
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
AV Y A G+ A ++ + SYG+E P V G E+AYAKNRRA++
Sbjct: 127 AVAKYLEALGVQAGQLSIVSYGEEKPLVLGQSEEAYAKNRRAVLV 171
>gi|37523008|ref|NP_926385.1| photosystem I P700 chlorophyll a apoprotein A2 [Gloeobacter
violaceus PCC 7421]
gi|68052682|sp|Q7NFT5|PSAB_GLOVI RecName: Full=Photosystem I P700 chlorophyll a apoprotein A2;
AltName: Full=PsaB
gi|35214011|dbj|BAC91380.1| Photosystem I P700 chlorophyll A apoprotein A2 [Gloeobacter
violaceus PCC 7421]
Length = 872
Score = 89.5 bits (220), Expect = 1e-16, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 59/165 (35%), Gaps = 17/165 (10%)
Query: 7 FIILSAITMMSISGIDNLDTKISSPDTVLN----------ESSLQEQFSSSVGDSVFFDT 56
+ +A + S + + +P + + +++ FD
Sbjct: 701 ILTYAAFLIASTAALYPNGPAAFTPAISAEQAKGVLSEFKAKPVPGGVMLLLPENIVFDF 760
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVA 115
S++ L+ + ++ + + I GH D LG + L RA AV +F
Sbjct: 761 DKSSVKLDADPALNRVVGVIQFYGSEPVEILGHTDSLGEDAYNQKLSEERASAVKAFFEK 820
Query: 116 RGISASRMKVTSYGKEMPSVYG------HDEDAYAKNRRAIVFLK 154
+GI A R+ YG+ P + D +NRR + +K
Sbjct: 821 KGIEAERLTAKGYGETKPVAPNAKPDGSDNPDGRQQNRRVEILIK 865
>gi|114707989|ref|ZP_01440881.1| OmpA family protein [Fulvimarina pelagi HTCC2506]
gi|114536618|gb|EAU39750.1| OmpA family protein [Fulvimarina pelagi HTCC2506]
Length = 221
Score = 89.5 bits (220), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 58/125 (46%), Gaps = 1/125 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHA 89
T ++ + + ++ ++ +V F + I P L ++ L+K D + + GH
Sbjct: 92 QGTGVSVTRVGDRIILNMPSNVTFPSDQSQILPGFYPTLDSVAIVLQKFDETIVNVYGHT 151
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G +++L +RA +V + +RG++ +R+ YG+ P E A+NRR
Sbjct: 152 DSQGGDGYNLSLSQQRASSVSQFLASRGVNPNRLNTQGYGESQPIADNSTEAGRARNRRV 211
Query: 150 IVFLK 154
V +
Sbjct: 212 EVQIS 216
>gi|73540381|ref|YP_294901.1| OmpA [Ralstonia eutropha JMP134]
gi|72117794|gb|AAZ60057.1| OmpA [Ralstonia eutropha JMP134]
Length = 212
Score = 89.5 bits (220), Expect = 1e-16, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 1/134 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF-L 84
K ++ ++ V FDT S +I+P+ VL + L +H
Sbjct: 79 NKDTAGTGTQITEQPDGSLKVNIPSQVTFDTDSATIKPSFRSVLDQVAQTLGQHQDVVAN 138
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+ GH D G+ ++ L RRA +V Y RG++ +R+ G+ P E
Sbjct: 139 VVGHTDSTGNAQYNMQLSQRRAQSVATYLGDRGVARNRLSAEGRGQTQPVADNATEAGRT 198
Query: 145 KNRRAIVFLKGCRA 158
+NRR +FLK +
Sbjct: 199 QNRRVEIFLKPIQG 212
>gi|197124193|ref|YP_002136144.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K]
gi|196174042|gb|ACG75015.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K]
Length = 543
Score = 89.5 bits (220), Expect = 1e-16, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 60/143 (41%), Gaps = 7/143 (4%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSS-----SVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
D+ D P N+ E+ + + V+FDT +I+ +L ++ +
Sbjct: 400 DDKDRCPDKPGIPENQGCPPERAEIKAGKIEIKEKVYFDTGKATIKAQSNALLDDVAKLI 459
Query: 77 --EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
IEGH D GS ++ AL +RA AV +Y V++G+ ASR++ +G + P
Sbjct: 460 AANPQVGVVTIEGHTDSTGSAATNRALSQKRAEAVKDYLVSKGVDASRLEAKGFGPDQPV 519
Query: 135 VYGHDEDAYAKNRRAIVFLKGCR 157
NRR ++
Sbjct: 520 ESNKTAKGREANRRVEFTIQNAN 542
>gi|86160165|ref|YP_466950.1| OmpA/MotB family outer membrane protein [Anaeromyxobacter
dehalogenans 2CP-C]
gi|85776676|gb|ABC83513.1| outer membrane protein, OmpA/MotB family [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 542
Score = 89.5 bits (220), Expect = 1e-16, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 59/143 (41%), Gaps = 7/143 (4%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSS-----SVGDSVFFDTSSYSIRPADIQVLSNLGS-- 74
D+ D P N+ E+ + + V+FDT +I+ +L ++
Sbjct: 399 DDKDRCPDKPGIPENQGCPPERAEIKAGKIDIKEKVYFDTGKATIKAQSNALLDDVAKLV 458
Query: 75 WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
IEGH D GS ++ AL +RA +V +Y V++G+ ASR++ +G + P
Sbjct: 459 AANPQVGVVTIEGHTDSTGSAATNRALSQKRAESVKDYLVSKGVDASRLEAKGFGPDRPV 518
Query: 135 VYGHDEDAYAKNRRAIVFLKGCR 157
NRR ++
Sbjct: 519 ESNKTAKGREANRRVEFTIQNAN 541
>gi|254512183|ref|ZP_05124250.1| peptidoglycan-associated lipoprotein [Rhodobacteraceae bacterium
KLH11]
gi|221535894|gb|EEE38882.1| peptidoglycan-associated lipoprotein [Rhodobacteraceae bacterium
KLH11]
Length = 169
Score = 89.5 bits (220), Expect = 1e-16, Method: Composition-based stats.
Identities = 49/166 (29%), Positives = 76/166 (45%), Gaps = 10/166 (6%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISS---------PDTVLNESSLQEQFSSSVGDS 51
M + A+T+++ ++ + ++ F +VGD
Sbjct: 1 MNLLSKIAAAGALTLIAACSNNDPSALGGAGGAGANGTLVPGSPSDPRSPAYFQQTVGDR 60
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVF 110
V F + ++ P VL WL + IEGHADE G+R ++ALG RRA A
Sbjct: 61 VLFAVNQSTLSPQAQTVLQGQADWLLANPDFVATIEGHADEQGTREYNLALGARRANAAR 120
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
Y ++RG++ +R+ SYGKE P E+ Y+KNRRA+ L G
Sbjct: 121 EYLISRGVAGNRLTTVSYGKERPIEICSTEECYSKNRRAVTVLTGS 166
>gi|153004024|ref|YP_001378349.1| OmpA/MotB domain-containing protein [Anaeromyxobacter sp. Fw109-5]
gi|152027597|gb|ABS25365.1| OmpA/MotB domain protein [Anaeromyxobacter sp. Fw109-5]
Length = 506
Score = 89.5 bits (220), Expect = 1e-16, Method: Composition-based stats.
Identities = 37/136 (27%), Positives = 55/136 (40%), Gaps = 5/136 (3%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
G D + + L E + S+ D++ FDT ++R VL + L H
Sbjct: 367 GPPQRDGCPVAEEEPLVEIETER---LSLKDAIQFDTGRDTLRSQSFPVLDAISGILAAH 423
Query: 80 D--CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+EGH D++G+ + L RRA V Y +GI R+ YG+E P
Sbjct: 424 PELRRVRVEGHTDDVGTNAYNKDLSDRRARTVVRYLAGKGIVPGRLVPAGYGEERPIAPN 483
Query: 138 HDEDAYAKNRRAIVFL 153
AKNRR +
Sbjct: 484 TSALGRAKNRRVEFTI 499
>gi|307729050|ref|YP_003906274.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003]
gi|307583585|gb|ADN56983.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003]
Length = 168
Score = 89.5 bits (220), Expect = 1e-16, Method: Composition-based stats.
Identities = 33/153 (21%), Positives = 63/153 (41%), Gaps = 1/153 (0%)
Query: 9 ILSAITMMSISGIDNLDTKIS-SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQ 67
LS + M + N DT+ S + + + + + + + + FD + +R
Sbjct: 11 ALSVVLMAGCAAPLNRDTETSLNKAVGIEVAPVTDGVAVKLPEKALFDFNKSDVRSDASG 70
Query: 68 VLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
V+ L++ ++EG+ D +G+ + L RA AV VARG++ R++
Sbjct: 71 VIDRSAVLLKRSKKPIIVEGYTDNVGTLEYNQQLSEARAVAVGYALVARGVAMDRIRTKG 130
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
P + A NRR + ++G T
Sbjct: 131 NAYNNPVASNDTPEGRALNRRTEIVVRGETMET 163
>gi|302873043|ref|YP_003841676.1| OmpA/MotB domain-containing protein [Clostridium cellulovorans
743B]
gi|307688801|ref|ZP_07631247.1| OmpA/MotB domain-containing protein [Clostridium cellulovorans
743B]
gi|302575900|gb|ADL49912.1| OmpA/MotB domain protein [Clostridium cellulovorans 743B]
Length = 256
Score = 89.5 bits (220), Expect = 1e-16, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 53/138 (38%), Gaps = 5/138 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
S + + + +V D++FFD+ +++ + L+ L L D +E
Sbjct: 112 AESELNGSATTAIEERGLVITVKDNLFFDSGKATVKEQYKRQLNALSKILSSIDNYVRVE 171
Query: 87 GHADE----LGSRNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDED 141
GH D NS+ L RA V F + +R+ YG+ P E+
Sbjct: 172 GHTDNVPIKTPYFNSNWQLSSIRASNVVEIFATECGLNPNRLLPVGYGEYRPIATNATEE 231
Query: 142 AYAKNRRAIVFLKGCRAN 159
A NRR + + + N
Sbjct: 232 GRAANRRVDIVILNSKFN 249
>gi|307545103|ref|YP_003897582.1| OmpA/MotB [Halomonas elongata DSM 2581]
gi|307217127|emb|CBV42397.1| OmpA/MotB [Halomonas elongata DSM 2581]
Length = 270
Score = 89.5 bits (220), Expect = 1e-16, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 3/131 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-D 80
D D +P E + V V F+ S + VL+++ S L + +
Sbjct: 138 DYQDQCPGTPAGA--EVNALGCVEDLVLQDVNFEFDSAQLTMGAESVLTDVASKLRANEN 195
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
IEGH D +G + L RRA +V ++ ++GI+A+RM YG+E P +
Sbjct: 196 VRVRIEGHTDSVGPAQYNKDLSQRRADSVASFLASQGIAANRMTTIGYGEEQPVASNDTK 255
Query: 141 DAYAKNRRAIV 151
A+NRR +
Sbjct: 256 AGRAENRRVEL 266
>gi|256846747|ref|ZP_05552203.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_36A2]
gi|256717967|gb|EEU31524.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_36A2]
Length = 190
Score = 89.5 bits (220), Expect = 1e-16, Method: Composition-based stats.
Identities = 37/160 (23%), Positives = 72/160 (45%), Gaps = 8/160 (5%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKIS------SPDTVLNESSLQEQFSSSVGDSVFF 54
M + +F L A+ + +++ + I +LN + +E S+ F
Sbjct: 13 MLFLLVF-SLPALAVQALTTTQMRENSIRINALELKNVDILNSEAPKEMTIVLDERSLNF 71
Query: 55 DTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
D +++P +L N+ ++E+++ + I GH D +GS + L RRA +V +
Sbjct: 72 DFDKSNVKPQYYDLLKNIKEFVEQNNYEITIVGHTDSIGSNAYNFKLSRRRAESVKAKLL 131
Query: 115 ARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G+S R+ + + G+E P ++ A+NRR L
Sbjct: 132 EFGLSEDRIVGIEAMGEEQPIATNATKEGRAQNRRVEFKL 171
>gi|254689864|ref|ZP_05153118.1| peptidoglycan-associated lipoprotein [Brucella abortus bv. 6 str.
870]
gi|256258118|ref|ZP_05463654.1| peptidoglycan-associated lipoprotein [Brucella abortus bv. 9 str.
C68]
gi|260755394|ref|ZP_05867742.1| OmpA family protein [Brucella abortus bv. 6 str. 870]
gi|260884410|ref|ZP_05896024.1| peptidoglycan-associated lipoprotein [Brucella abortus bv. 9 str.
C68]
gi|297248966|ref|ZP_06932674.1| outer membrane lipoprotein omp16 [Brucella abortus bv. 5 str.
B3196]
gi|260675502|gb|EEX62323.1| OmpA family protein [Brucella abortus bv. 6 str. 870]
gi|260873938|gb|EEX81007.1| peptidoglycan-associated lipoprotein [Brucella abortus bv. 9 str.
C68]
gi|297174099|gb|EFH33456.1| outer membrane lipoprotein omp16 [Brucella abortus bv. 5 str.
B3196]
Length = 168
Score = 89.5 bits (220), Expect = 1e-16, Method: Composition-based stats.
Identities = 47/155 (30%), Positives = 75/155 (48%), Gaps = 6/155 (3%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDT-----VLNESSLQEQFSSSVGDSVFFDTSSYSIR 62
I+++ ++++G + ++ + F+ +VGD +FFD S IR
Sbjct: 12 IVIALFMSLAVAGCASKKNLPNNAGDLGLGAGAATPGSSQDFTVNVGDRIFFDLDSSLIR 71
Query: 63 PADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS 121
Q LS W IEGHADE G+R ++ALG RRA A ++ +RG+ +
Sbjct: 72 ADAQQTLSKQAQWLQRYPQYSITIEGHADERGTREYNLALGQRRAAATRDFLASRGVPTN 131
Query: 122 RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
RM+ SYG E P + +++NRRA+ L G
Sbjct: 132 RMRTISYGNERPVAVCDADTCWSQNRRAVTVLNGA 166
>gi|108755187|emb|CAK32579.1| outer membrane protein [uncultured organism]
Length = 178
Score = 89.5 bits (220), Expect = 1e-16, Method: Composition-based stats.
Identities = 47/121 (38%), Positives = 70/121 (57%), Gaps = 1/121 (0%)
Query: 36 NESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGS 94
+ +F S VGD +FF+ Y+++ L +WL+K +EGH DE G+
Sbjct: 54 PAKGSKAEFVSEVGDRIFFEFDKYNLKAGARGTLEKQAAWLKKWPAVTITVEGHCDERGT 113
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
R ++ALG RRA +V +Y VA G++ SR+K SYGKE P G +E A+A+NRR + +
Sbjct: 114 REYNLALGERRANSVKDYLVALGVNPSRIKTISYGKERPVALGSNESAWAQNRRGVTAIT 173
Query: 155 G 155
G
Sbjct: 174 G 174
>gi|330504866|ref|YP_004381735.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
gi|328919152|gb|AEB59983.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
Length = 222
Score = 89.5 bits (220), Expect = 1e-16, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 1/125 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHA 89
T + + + ++ F T S I + Q L+NL + + + + + GH
Sbjct: 92 QGTGVEVQRQGDVIQLIMPGNITFATDSAQIASSFYQPLNNLANSFRQYNQNSIEVVGHT 151
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GS + ++AL RRA +V +Y +A+GI SR+ G + P D A+NRR
Sbjct: 152 DSTGSHSHNMALSQRRAQSVADYLLAQGIDPSRVSTRGMGPDQPVASNATADGRAQNRRV 211
Query: 150 IVFLK 154
V L+
Sbjct: 212 EVTLR 216
>gi|225628264|ref|ZP_03786298.1| peptidoglycan-associated lipoprotein [Brucella ceti str. Cudo]
gi|225616110|gb|EEH13158.1| peptidoglycan-associated lipoprotein [Brucella ceti str. Cudo]
Length = 183
Score = 89.5 bits (220), Expect = 1e-16, Method: Composition-based stats.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 6/155 (3%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDT-----VLNESSLQEQFSSSVGDSVFFDTSSYSIR 62
I ++ ++++G + ++ + F+ +VGD +FFD S IR
Sbjct: 27 IAIALFMSLAVAGCASKKNLPNNAGDLGLGAGAATPGSSQDFTVNVGDRIFFDLDSSLIR 86
Query: 63 PADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS 121
Q LS W IEGHADE G+R ++ALG RRA A ++ +RG+ +
Sbjct: 87 ADAQQTLSKQAQWLQRYPQYSITIEGHADERGTREYNLALGQRRAAATRDFLASRGVPTN 146
Query: 122 RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
RM+ SYG E P + +++NRRA+ L G
Sbjct: 147 RMRTISYGNERPVAVCDADTCWSQNRRAVTVLNGA 181
>gi|167893289|ref|ZP_02480691.1| ompA family protein [Burkholderia pseudomallei 7894]
Length = 171
Score = 89.5 bits (220), Expect = 1e-16, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 56/140 (40%), Gaps = 1/140 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
I N + +V SV F T Y+I PA +L++L + +
Sbjct: 30 AIKNKLAPSAQQTGTQVTEQPDGSLKLNVPSSVTFATDQYAITPAFTPLLNDLATTLNQN 89
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ G+ D GS + L RA +V N RG++A+R+ G P
Sbjct: 90 PQITASVVGYTDSTGSAAHNQTLSQNRAQSVVNALAQRGVAANRLSAQGMGASNPIADNA 149
Query: 139 DEDAYAKNRRAIVFLKGCRA 158
E A+NRR ++L+ +A
Sbjct: 150 TEAGRAQNRRVEIYLRAPQA 169
>gi|167844755|ref|ZP_02470263.1| ompA family protein [Burkholderia pseudomallei B7210]
Length = 163
Score = 89.5 bits (220), Expect = 1e-16, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 56/140 (40%), Gaps = 1/140 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
I N + +V SV F T Y+I PA +L++L + +
Sbjct: 22 AIKNKLAPSAQQTGTQVTEQPDGSLKLNVPSSVTFATDQYAITPAFTPLLNDLATTLNQN 81
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ G+ D GS + L RA +V N RG++A+R+ G P
Sbjct: 82 PQITASVVGYTDSTGSAAHNQTLSQNRAQSVVNALAQRGVAANRLSAQGMGASNPIADNA 141
Query: 139 DEDAYAKNRRAIVFLKGCRA 158
E A+NRR ++L+ +A
Sbjct: 142 TEAGRAQNRRVEIYLRAPQA 161
>gi|308049997|ref|YP_003913563.1| peptidoglycan-associated lipoprotein [Ferrimonas balearica DSM
9799]
gi|307632187|gb|ADN76489.1| peptidoglycan-associated lipoprotein [Ferrimonas balearica DSM
9799]
Length = 175
Score = 89.5 bits (220), Expect = 1e-16, Method: Composition-based stats.
Identities = 45/174 (25%), Positives = 72/174 (41%), Gaps = 22/174 (12%)
Query: 1 MQY----STIFIILSAITMMSISGIDNLD-----------------TKISSPDTVLNESS 39
M+ + I + A+ + + S + D T E
Sbjct: 1 MKLNQVLKGLLIAVPALALTACSSTSDTDAQSSSSSNQQQVESGVQTGAIEQVQTPEEIQ 60
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSS 98
Q+ ++FD + ++L + +E LIEGHADE G+ +
Sbjct: 61 RQKYEQLRQEHIIYFDFDRSDVSGQYAELLEAHAAFLVENPSTKVLIEGHADERGTPEYN 120
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
IALG RRA AV Y G+ +S++ + SYG+E P + A+AKNRRA++
Sbjct: 121 IALGERRAKAVERYLQGLGVLSSQITIVSYGEEKPLDSSATDAAHAKNRRAVLV 174
>gi|83814826|ref|YP_444492.1| OmpA family protein [Salinibacter ruber DSM 13855]
gi|83756220|gb|ABC44333.1| OmpA family protein [Salinibacter ruber DSM 13855]
Length = 230
Score = 89.1 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 52/133 (39%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-D 80
D ++ + + E + + FD S ++R Q L+ ++ D
Sbjct: 78 DTKAEELDEELDNADVERVGEGIKVTFDSGILFDFDSSTLRAEARQNLTEFAESMQGFED 137
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
L+ GH D GS + L RRA + + V RG+ SR+ G+ P E
Sbjct: 138 TKILVVGHTDAQGSEEYNQKLSDRRAESATRHLVDRGVDPSRLTSVGRGETEPVASNETE 197
Query: 141 DAYAKNRRAIVFL 153
+ +NRR V +
Sbjct: 198 EGRQQNRRVEVAI 210
>gi|317060136|ref|ZP_07924621.1| outer membrane protein [Fusobacterium sp. D12]
gi|313685812|gb|EFS22647.1| outer membrane protein [Fusobacterium sp. D12]
Length = 193
Score = 89.1 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+T + E S + V F + S I L+++ ++ + L++GH D
Sbjct: 66 NTAVQVQRDGENISLYLPGGVTFASDSAQISGNFYSALNSIAQVLVQYPETQILVQGHTD 125
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS ++ L RRA +V Y + +G++++R+ +G P + NRR
Sbjct: 126 STGSFQHNMDLSNRRANSVKQYLIGQGVASNRLTSQGFGPNNPVADNSTPEGRQMNRRVE 185
Query: 151 VFL 153
+ +
Sbjct: 186 IKI 188
>gi|299134179|ref|ZP_07027372.1| peptidoglycan-associated lipoprotein [Afipia sp. 1NLS2]
gi|298590926|gb|EFI51128.1| peptidoglycan-associated lipoprotein [Afipia sp. 1NLS2]
Length = 162
Score = 89.1 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 55/150 (36%), Positives = 75/150 (50%), Gaps = 4/150 (2%)
Query: 5 TIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPA 64
+L+ M N D + Q+ F +VGD VFFD+ +
Sbjct: 12 KFAAVLAVALSMGACANKNGDLNGMAGAAT---PGSQQDFVVNVGDRVFFDSDQTELSQQ 68
Query: 65 DIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
I L W + F IEGHADE G+R +IALG +RA +V N+ V+RGISASRM
Sbjct: 69 AINTLEKQAQWLQQYPRYTFTIEGHADERGTREYNIALGAKRAQSVRNFLVSRGISASRM 128
Query: 124 KVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ SYGKE P +D +++NRRA+ L
Sbjct: 129 RTISYGKERPVAVCNDISCWSQNRRAVTVL 158
>gi|262170812|ref|ZP_06038490.1| outer membrane protein A precursor [Vibrio mimicus MB-451]
gi|261891888|gb|EEY37874.1| outer membrane protein A precursor [Vibrio mimicus MB-451]
Length = 322
Score = 89.1 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 57/138 (41%), Gaps = 1/138 (0%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW- 75
+ + + + V+ + ++ + F+ DS F +S ++P+ L L +
Sbjct: 176 AAVEQRPAEPAPVAEEPVVEKVAVTKTFTFQHLDSGTFANNSAELKPSMETKLDKLVGYL 235
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+ + GH D GS+ + L +RA AV A+G+ A+R+ G+ P
Sbjct: 236 NQYPQAKVEVVGHTDSNGSKAYNQKLSEKRAQAVAKALEAQGVDAARITAKGQGESNPIA 295
Query: 136 YGHDEDAYAKNRRAIVFL 153
+ KNRR + +
Sbjct: 296 SNATAEGREKNRRVELVI 313
>gi|319781028|ref|YP_004140504.1| peptidoglycan-associated lipoprotein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317166916|gb|ADV10454.1| peptidoglycan-associated lipoprotein [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 168
Score = 89.1 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 55/155 (35%), Positives = 86/155 (55%), Gaps = 6/155 (3%)
Query: 8 IILSAITMMSISGIDNLDTKISSPD-----TVLNESSLQEQFSSSVGDSVFFDTSSYSIR 62
++++ + M++I+G + T ++ D + F+ ++GD +FFDT S SIR
Sbjct: 12 VMIALVAMLAIAGCASKKTPNNAADLGLNGAGAATPGSAQDFTVNIGDRIFFDTDSTSIR 71
Query: 63 PADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS 121
LS W + ++EGHADE G+R ++ALG RRA A ++ VA+G+SAS
Sbjct: 72 ADAQTTLSRQAQWLNQYKQYAIVVEGHADERGTREYNLALGARRAAATRDFLVAKGVSAS 131
Query: 122 RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
R+K SYGKE P D +++NRRA+ L G
Sbjct: 132 RLKTISYGKERPVAVCDDISCWSQNRRAVTTLSGA 166
>gi|260432355|ref|ZP_05786326.1| inner membrane lipoprotein YiaD [Silicibacter lacuscaerulensis
ITI-1157]
gi|260416183|gb|EEX09442.1| inner membrane lipoprotein YiaD [Silicibacter lacuscaerulensis
ITI-1157]
Length = 223
Score = 89.1 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 59/140 (42%), Gaps = 2/140 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
+ + + + + ++ +V + + FDT S ++RPA L +G +
Sbjct: 85 QAAELRQQLANDGITIVNAGDRLIVTVPNDITFDTDSATVRPALRADLVRVGQNLVNYPK 144
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ I GH D G + AL RRA AV + A G+S +R+ G+ P
Sbjct: 145 SNVQIIGHTDSDGDAGYNQALSERRASAVADILHANGVSYARITTIGRGENQPIASNLTP 204
Query: 141 DAYAKNRRAIVFLKGCRANT 160
+ A+NRR + + NT
Sbjct: 205 EGKAQNRRVEIVIVPS-GNT 223
>gi|110633615|ref|YP_673823.1| OmpA/MotB [Mesorhizobium sp. BNC1]
gi|110284599|gb|ABG62658.1| OmpA/MotB [Chelativorans sp. BNC1]
Length = 217
Score = 89.1 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHA 89
T ++ + + ++ ++ F T S I+PA Q L+++ L++++ + GH
Sbjct: 88 QGTGVSVTRQGDYIILNMPSNITFATDSADIQPAFYQTLNSVALVLKRYNQTLVDVYGHT 147
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GS ++ L RRA +V +Y +A+G + R V G P + A+NRR
Sbjct: 148 DSTGSLQHNMQLSQRRAASVADYLIAQGTDSRRFAVIGQGPSQPIASNATPEGRAQNRRV 207
Query: 150 IVFL 153
+ L
Sbjct: 208 EIRL 211
>gi|326799764|ref|YP_004317583.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
gi|326550528|gb|ADZ78913.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
Length = 169
Score = 89.1 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 63/167 (37%), Gaps = 14/167 (8%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSL------------QEQFSSSV 48
M+ + I I++ + ++ V+N E +
Sbjct: 1 MKLNKIAFIVALGAATFFVSCKSKKLIVNDGAEVVNTGGTPDHIEGGTVSRTDEGVVLTF 60
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD--CDFLIEGHADELGSRNSSIALGLRRA 106
V F T+S + + N+ +++ K+ I GH D G + + L +RA
Sbjct: 61 ESDVLFATNSSYLSEKAKVTMKNMVAYINKNYPNAQIQINGHTDSTGEADYNQWLSEKRA 120
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+V NY V+ G++ S +K YGK P D KNRR V +
Sbjct: 121 ASVKNYAVSIGLNGSNIKTKGYGKSKPVATNSTADGRQKNRRVEVII 167
>gi|258621036|ref|ZP_05716070.1| outer membrane protein OmpA [Vibrio mimicus VM573]
gi|262166295|ref|ZP_06034032.1| outer membrane protein A precursor [Vibrio mimicus VM223]
gi|258586424|gb|EEW11139.1| outer membrane protein OmpA [Vibrio mimicus VM573]
gi|262026011|gb|EEY44679.1| outer membrane protein A precursor [Vibrio mimicus VM223]
Length = 322
Score = 89.1 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 56/138 (40%), Gaps = 1/138 (0%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW- 75
+ + + + V+ + ++ + F+ DS F +S ++P+ L L +
Sbjct: 176 AAVEQRPAEPAPVAEEPVVEKVAVTKTFTFQHLDSGTFANNSAELKPSMETKLDKLVGYL 235
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+ + GH D GS + L +RA AV A+G+ A+R+ G+ P
Sbjct: 236 NQYPQAKVEVVGHTDSNGSEAYNQKLSEKRAQAVAKALEAQGVDAARITAKGQGESNPIA 295
Query: 136 YGHDEDAYAKNRRAIVFL 153
+ KNRR + +
Sbjct: 296 SNATAEGREKNRRVELVI 313
>gi|284040434|ref|YP_003390364.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
gi|283819727|gb|ADB41565.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
Length = 537
Score = 89.1 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEK-HDCDFLIEGHADELGSRNSSIALGLRRAYA 108
+++FFDT +RP L L + L + GH D GS + L RA A
Sbjct: 430 NNIFFDTGKSELRPESGPELDRLVTTLNDAPKMTIEVRGHTDNTGSNEINAKLSQDRADA 489
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V YF+++GI R+ +G+ P+ + E+ +NRR +
Sbjct: 490 VREYFISKGIEPDRIASKGFGEAKPTASNNTEEGRQQNRRVEFVI 534
>gi|167909987|ref|ZP_02497078.1| ompA family protein [Burkholderia pseudomallei 112]
gi|254199385|ref|ZP_04905751.1| OmpA family protein [Burkholderia mallei FMH]
gi|254205699|ref|ZP_04912051.1| OmpA family protein [Burkholderia mallei JHU]
gi|147748981|gb|EDK56055.1| OmpA family protein [Burkholderia mallei FMH]
gi|147753142|gb|EDK60207.1| OmpA family protein [Burkholderia mallei JHU]
Length = 207
Score = 89.1 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 56/140 (40%), Gaps = 1/140 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
I N + +V SV F T Y+I PA +L++L + +
Sbjct: 66 AIKNKLAPSAQQTGTQVTEQPDGSLKLNVPSSVTFATDQYAITPAFTPLLNDLATTLNQN 125
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ G+ D GS + L RA +V N RG++A+R+ G P
Sbjct: 126 PQITASVVGYTDSTGSAAHNQTLSQNRAQSVVNALAQRGVAANRLSAQGMGASNPIADNA 185
Query: 139 DEDAYAKNRRAIVFLKGCRA 158
E A+NRR ++L+ +A
Sbjct: 186 TEAGRAQNRRVEIYLRAPQA 205
>gi|153002898|ref|YP_001377223.1| OmpA/MotB domain-containing protein [Anaeromyxobacter sp. Fw109-5]
gi|152026471|gb|ABS24239.1| OmpA/MotB domain protein [Anaeromyxobacter sp. Fw109-5]
Length = 510
Score = 89.1 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 55/139 (39%), Gaps = 7/139 (5%)
Query: 22 DNLDTKISSPDTVLNESSL-----QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
D+ D + + NE +E + + V FDT +I+P +L + L
Sbjct: 368 DHQDKCPAEAGSADNEGCPRVVVEKEAKKVELREKVQFDTGKATIKPESAGLLDEIAKVL 427
Query: 77 EKH--DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
+H +IEGH+D G + L RA AV V RGI+ R+ +G P
Sbjct: 428 AEHAEITRVVIEGHSDSSGGAALNKRLSQARADAVLKALVERGIAKERLSAKGFGPSRPI 487
Query: 135 VYGHDEDAYAKNRRAIVFL 153
+ NRR + +
Sbjct: 488 ASNDTPEGREANRRVEISI 506
>gi|167618284|ref|ZP_02386915.1| ompA family protein [Burkholderia thailandensis Bt4]
Length = 171
Score = 89.1 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 56/140 (40%), Gaps = 1/140 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
I N + +V SV F T Y++ PA +L++L + +
Sbjct: 30 AIKNKLAPSAQQTGTQVTEQPDGSLKLNVPSSVTFATDQYAVTPAFTPLLNDLATTLNQN 89
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ G+ D GS + L RA +V N RG++A+R+ G P
Sbjct: 90 PQITASVVGYTDSTGSAAHNQTLSQNRAQSVVNALAQRGVAATRLSAQGMGASNPIADNA 149
Query: 139 DEDAYAKNRRAIVFLKGCRA 158
E A+NRR ++L+ +A
Sbjct: 150 TEAGRAQNRRVEIYLRAPQA 169
>gi|146276251|ref|YP_001166410.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
17025]
gi|145554492|gb|ABP69105.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17025]
Length = 228
Score = 89.1 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 63/149 (42%), Gaps = 1/149 (0%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVL 69
+ + S D + S ++ ++ ++ + ++ + F T S ++RP + L
Sbjct: 80 ILGGAVGSALDRQAADLRNSIGNSQVSVTNTGSELVVTMPQDILFATDSANLRPDLQRDL 139
Query: 70 SNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
+ + L + ++ GH D GS + L +RRA +V + G+ + R+
Sbjct: 140 AAVAQNLLRYPNSTIMVVGHTDSTGSAAYNQDLSMRRAQSVAGVLIGNGVPSYRVASLGR 199
Query: 129 GKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
G++ P + A+NRR + ++
Sbjct: 200 GEDQPIASNLTPEGRAQNRRVDIIIRPTN 228
>gi|83720098|ref|YP_441413.1| ompA family protein [Burkholderia thailandensis E264]
gi|83653923|gb|ABC37986.1| ompA family protein [Burkholderia thailandensis E264]
Length = 261
Score = 89.1 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 56/140 (40%), Gaps = 1/140 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
I N + +V SV F T Y++ PA +L++L + +
Sbjct: 120 AIKNKLAPSAQQTGTQVTEQPDGSLKLNVPSSVTFATDQYAVTPAFTPLLNDLATTLNQN 179
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ G+ D GS + L RA +V N RG++A+R+ G P
Sbjct: 180 PQITASVVGYTDSTGSAAHNQTLSQNRAQSVVNALAQRGVAATRLSAQGMGASNPIADNA 239
Query: 139 DEDAYAKNRRAIVFLKGCRA 158
E A+NRR ++L+ +A
Sbjct: 240 TEAGRAQNRRVEIYLRAPQA 259
>gi|119383439|ref|YP_914495.1| OmpA domain-containing protein [Paracoccus denitrificans PD1222]
gi|119373206|gb|ABL68799.1| OmpA domain protein [Paracoccus denitrificans PD1222]
Length = 173
Score = 89.1 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 10/164 (6%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSP---------DTVLNESSLQEQFSSSVGDS 51
M+ + AI ++ D +I P E F +SVGD+
Sbjct: 5 MKTFMKIAAVGAILALAACARPAQDMQIQDPYAGAGGASGVGASVLPGSAEYFKASVGDT 64
Query: 52 VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
V F ++ P +L+N W + +IEGHADE G+R ++ALG RRA +V
Sbjct: 65 VLFPLDQSTLTPEARVILANQAGWLNQNAGFAAVIEGHADEQGTREYNLALGARRANSVQ 124
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
Y +++GI+ R++ SYGKE P E+ + KNRRA+ +
Sbjct: 125 EYLISQGIAPGRLRTVSYGKERPLAICSTEECFTKNRRAVTVVS 168
>gi|260774012|ref|ZP_05882927.1| outer membrane protein A precursor [Vibrio metschnikovii CIP 69.14]
gi|260610973|gb|EEX36177.1| outer membrane protein A precursor [Vibrio metschnikovii CIP 69.14]
Length = 351
Score = 89.1 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 31/145 (21%), Positives = 61/145 (42%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQ 67
+ S+I + G T + ++ ++ +Q+ V +S + + ++ S
Sbjct: 193 VTFSSIGLSYKFGQSRTKTVFQEVEKIVEKTEIQQVNYELVSESFYSNFANDSYELISAN 252
Query: 68 VLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
+ L ++K I GH D +G + L +RA +V +Y + GI + ++ V
Sbjct: 253 DIDKLIPKIKKSQGMITIIGHTDSIGRPLYNYQLSYKRAQSVADYLIKNGIKSDQVVVIG 312
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVF 152
G++ P + AKNRR V
Sbjct: 313 MGEDKPIADNLSYEGRAKNRRVEVI 337
>gi|157164740|ref|YP_001466195.1| outer membrane fibronectin-binding protein [Campylobacter concisus
13826]
gi|112801501|gb|EAT98845.1| outer membrane fibronectin-binding protein [Campylobacter concisus
13826]
Length = 337
Score = 89.1 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 55/130 (42%), Gaps = 1/130 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHD 80
+++D ++P V+ + E+ V F SY + P + + ++ E D
Sbjct: 203 NDIDQCPNTPAGVVVDERGCEKVIVLRDLDVNFAFDSYKVGPKYAAEIKKVADFMGEHPD 262
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++ GH D +G+ + L +RA AV G+ +++ YG+ P +
Sbjct: 263 YKVVLAGHTDSVGAEAYNQKLSEKRAKAVAEVLAGYGVEKAKISTVGYGELKPIATNKTK 322
Query: 141 DAYAKNRRAI 150
+ A+NRR
Sbjct: 323 EGRAQNRRVE 332
>gi|183179549|ref|ZP_02957760.1| outer membrane protein OmpA [Vibrio cholerae MZO-3]
gi|183012960|gb|EDT88260.1| outer membrane protein OmpA [Vibrio cholerae MZO-3]
Length = 321
Score = 89.1 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 1/134 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKH 79
++ + + T + + ++ + F+ DS F T+S ++PA +Q L + + +
Sbjct: 179 VEQRPAEPAPVATPVEKVAVTKTFTFQHLDSSTFATASAELKPATVQKLDKIVGYLNQYP 238
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ GH D GS + L RRA AV A+GI ASR+ G+ P
Sbjct: 239 QAKVEVVGHTDSTGSEAYNQKLSERRAQAVAKALEAQGIDASRISAKGLGESSPIASNAT 298
Query: 140 EDAYAKNRRAIVFL 153
+ KNRR + +
Sbjct: 299 AEGREKNRRVELVI 312
>gi|254700357|ref|ZP_05162185.1| peptidoglycan-associated lipoprotein [Brucella suis bv. 5 str. 513]
gi|261750850|ref|ZP_05994559.1| peptidoglycan-associated lipoprotein [Brucella suis bv. 5 str. 513]
gi|261740603|gb|EEY28529.1| peptidoglycan-associated lipoprotein [Brucella suis bv. 5 str. 513]
Length = 168
Score = 89.1 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 6/155 (3%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDT-----VLNESSLQEQFSSSVGDSVFFDTSSYSIR 62
I ++ ++++G + ++ + F+ +VGD +FFD S IR
Sbjct: 12 IAIALFMSLAVAGCASKKNLPNNAGDLGLGAGAATPGSSQDFTVNVGDRIFFDLDSSLIR 71
Query: 63 PADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS 121
Q LS W IEGHADE G+R ++ALG RRA A ++ +RG+ A+
Sbjct: 72 ADAQQTLSKQAQWLQRYPQYSITIEGHADERGTREYNLALGQRRAAATRDFLASRGVPAN 131
Query: 122 RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
RM+ SYG E P + +++NRRA+ L G
Sbjct: 132 RMRTISYGNERPVAVCDADTCWSQNRRAVTVLNGA 166
>gi|294785320|ref|ZP_06750608.1| outer membrane porin F [Fusobacterium sp. 3_1_27]
gi|294487034|gb|EFG34396.1| outer membrane porin F [Fusobacterium sp. 3_1_27]
Length = 396
Score = 89.1 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 2/111 (1%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALG 102
++ + FD Y +RP +VL NL L++ D F ++GH D S + L
Sbjct: 284 LLITLDSGILFDVDKYDLRPEAEEVLKNLAIVLKEADIKAFEVDGHTDSDASDKHNQILS 343
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA AV N+ ++GI+A + + YG+ P + KNRR + +
Sbjct: 344 ENRANAVKNFLTSQGITAE-ITIKGYGESRPIASNDTAEGKQKNRRVEIII 393
>gi|319406244|emb|CBI79881.1| Outer membrane lipoprotein omp16 [Bartonella sp. AR 15-3]
Length = 168
Score = 89.1 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 50/155 (32%), Positives = 82/155 (52%), Gaps = 3/155 (1%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTVLN--ESSLQEQFSSSVGDSVFFDTSSYSIRPAD 65
++ + + G ++DT S ++ N ++ + F+ +VGD +FF S SI
Sbjct: 14 VVFCLLLTLIGCGKKSIDTNNSVSNSGFNNVQAGSSQDFTVNVGDRIFFSLDSSSIESDA 73
Query: 66 IQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L+ WL IEGHADE G+R ++ALG RRA AV +Y ++ G+S+ RM
Sbjct: 74 EYILARQAEWLLRYPHYFITIEGHADERGTREYNLALGQRRAVAVRDYLISLGVSSQRMN 133
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
SYGKE P + + +NRRA++ + R++
Sbjct: 134 TVSYGKERPVAICDNISCWNQNRRAVLVVNNTRSH 168
>gi|262281579|ref|ZP_06059357.1| OmpA/MotB [Acinetobacter calcoaceticus RUH2202]
gi|262256955|gb|EEY75695.1| OmpA/MotB [Acinetobacter calcoaceticus RUH2202]
Length = 159
Score = 89.1 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 33/157 (21%), Positives = 64/157 (40%), Gaps = 4/157 (2%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESS---LQEQFSSSVGDSVFFDTS 57
M ++ + A+ ++++G + T +L + E ++ + + + FD +
Sbjct: 1 MNTRSLKLSFIALLCITLAGCLSFGTLKYRQVKLLKKEGFVLTNEGWTLGLPERLLFDFN 60
Query: 58 SYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
+ ++ + L L S + I GH D++G + L RA +V N F+AR
Sbjct: 61 NAELKQSHEAELVRLASQLNKYDLNKLKIVGHTDDVGDAAYNQKLSEERAQSVANLFLAR 120
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G + V G P V + A NRR + +
Sbjct: 121 GFKQENIYVIGRGSTQPYVPNTTNENRAINRRVAIVV 157
>gi|162449773|ref|YP_001612140.1| outer membrane protein [Sorangium cellulosum 'So ce 56']
gi|161160355|emb|CAN91660.1| outer membrane protein [Sorangium cellulosum 'So ce 56']
Length = 601
Score = 89.1 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 2/139 (1%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
+ + E + V F T I P ++LS + + LE
Sbjct: 447 ACPYERGKPSEDRATHGCPFAVRIEGSQIVILQQVQFRTGRAEIEPESFELLSEVAAVLE 506
Query: 78 KHD--CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+H ++GH D G+ ++++L RRA AV + A GI A R++ +G P
Sbjct: 507 EHPEIARVAVDGHTDNQGAAQANLSLSQRRALAVVAWLTAHGIDARRLEARGFGARRPLA 566
Query: 136 YGHDEDAYAKNRRAIVFLK 154
D AKNRR ++
Sbjct: 567 DNRTRDGRAKNRRVEFQIR 585
>gi|197120112|ref|YP_002140539.1| chemotaxis protein MotB [Geobacter bemidjiensis Bem]
gi|197089472|gb|ACH40743.1| chemotaxis MotB protein [Geobacter bemidjiensis Bem]
Length = 254
Score = 89.1 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 51/130 (39%), Gaps = 5/130 (3%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGH 88
++ S S+ ++ FFD+ S +++ +L ++ S L + +EGH
Sbjct: 115 VGAQAKVSVSVTPRGLVVSLKEAGFFDSGSATLKQDSYALLKDVVSSLSSYSNGIRVEGH 174
Query: 89 ADELG----SRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAY 143
D + S S+ L RA V Y + R+ YG+ P D +
Sbjct: 175 TDNMPISSASFPSNWELSTARATNVLQYLTKQTDFDPYRISAAGYGEYRPVADNSDAEGR 234
Query: 144 AKNRRAIVFL 153
KNRR + L
Sbjct: 235 GKNRRVDIVL 244
>gi|78067236|ref|YP_370005.1| OmpA/MotB family protein [Burkholderia sp. 383]
gi|77967981|gb|ABB09361.1| OmpA/MotB family protein [Burkholderia sp. 383]
Length = 214
Score = 89.1 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 56/140 (40%), Gaps = 1/140 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
I N ++ +V SV F T+ Y+I PA +L++L + +
Sbjct: 74 AIKNKLAPSAAQTGTQVTEQPDGSLKLNVPSSVTFATNQYAITPAFQPLLNDLATTLNQN 133
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
I G+ D GS + L RA +V N RG++ R+ G P
Sbjct: 134 PQVTASIVGYTDSTGSAQLNQTLSQNRAQSVVNALAQRGVNGGRLSAQGMGASNPIADNA 193
Query: 139 DEDAYAKNRRAIVFLKGCRA 158
E A+NRR ++L+ +A
Sbjct: 194 TEAGRAQNRRVEIYLRAAQA 213
>gi|90418977|ref|ZP_01226888.1| peptidoglycan-associated lipoprotein [Aurantimonas manganoxydans
SI85-9A1]
gi|90337057|gb|EAS50762.1| peptidoglycan-associated lipoprotein [Aurantimonas manganoxydans
SI85-9A1]
Length = 177
Score = 89.1 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 53/164 (32%), Positives = 80/164 (48%), Gaps = 15/164 (9%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTVL--------------NESSLQEQFSSSVGDSVF 53
I + + ++++G + + L + F+ +VGD VF
Sbjct: 12 IAFAVVASLAVAGCASKKDALPDNAAGLGLNGANGANGAYGSATPGSTQDFTVNVGDRVF 71
Query: 54 FDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FDT S S+R Q L+ W + +IEGHADE G+R ++ALG RRA A +Y
Sbjct: 72 FDTDSTSLRADAQQTLTQQARWLNQYSQYSIVIEGHADERGTREYNLALGARRAAATRDY 131
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
V +G+ A+RM+ SYGKE P D +++NRRA+ L G
Sbjct: 132 LVQQGVPANRMRTISYGKERPVAVCDDISCWSQNRRAVTVLSGA 175
>gi|306844687|ref|ZP_07477272.1| peptidoglycan-associated lipoprotein [Brucella sp. BO1]
gi|306274859|gb|EFM56629.1| peptidoglycan-associated lipoprotein [Brucella sp. BO1]
Length = 168
Score = 88.7 bits (218), Expect = 2e-16, Method: Composition-based stats.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 6/155 (3%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDT-----VLNESSLQEQFSSSVGDSVFFDTSSYSIR 62
I ++ ++++G + ++ + F+ +VGD +FFD S IR
Sbjct: 12 IAIALFMSLAVAGCASKKNLPNNAGDLGLGAGAATPGSSQDFTVNVGDRIFFDLDSSLIR 71
Query: 63 PADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS 121
Q LS W IEGHADE G+R ++ALG RRA A ++ +RG+ +
Sbjct: 72 ADAQQTLSKQAQWLQRYPQYSITIEGHADERGTREYNLALGQRRAAATRDFLASRGVPTN 131
Query: 122 RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
RM+ SYG E P + +++NRRA+ L G
Sbjct: 132 RMRTISYGNERPVAVCDADSCWSQNRRAVTVLNGA 166
>gi|325105502|ref|YP_004275156.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
gi|324974350|gb|ADY53334.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
Length = 442
Score = 88.7 bits (218), Expect = 2e-16, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 56/143 (39%), Gaps = 8/143 (5%)
Query: 17 SISGIDN-LDTKISSPDTVLNESSLQEQFSS------SVGDSVFFDTSSYSIRPADIQVL 69
+ +D D D E E ++ D++ F+ +S +R + L
Sbjct: 297 AGCELDTDGDGVPDWKDDCPTEKGTPELNGCPASDTNTIADNIQFEFNSSVLRTSAYPTL 356
Query: 70 SNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
+ S L ++GHA G+ ++ L + RA +V Y V G+ A R+ V Y
Sbjct: 357 DRVSSSLRADKSKSIQLDGHASAEGTEAYNMQLSIDRANSVKTYLVNSGVDAKRIAVKGY 416
Query: 129 GKEMPSVYGHDEDAYAKNRRAIV 151
G+ P E+ KNRR
Sbjct: 417 GESRPIASNATEEGRIKNRRVEF 439
>gi|299768758|ref|YP_003730784.1| Outer membrane protein A precursor [Acinetobacter sp. DR1]
gi|298698846|gb|ADI89411.1| Outer membrane protein A precursor [Acinetobacter sp. DR1]
Length = 159
Score = 88.7 bits (218), Expect = 2e-16, Method: Composition-based stats.
Identities = 31/157 (19%), Positives = 63/157 (40%), Gaps = 4/157 (2%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESS---LQEQFSSSVGDSVFFDTS 57
M ++ + A+ ++++G + +L + E ++ + + + FD +
Sbjct: 1 MNTRSLKLSFIALLCITLAGCLSFGPLKYRQVKLLKKEGFVLTDEGWTLGLPERLLFDFN 60
Query: 58 SYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
+ ++ + L L + + I GH D++G + L RA +V N F+AR
Sbjct: 61 NAELKQSHEAELVRLANQLNKYDLNKLKIVGHTDDVGDAAYNQKLSEERAQSVANLFLAR 120
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G + V G P V + A NRR + +
Sbjct: 121 GFKKENIYVIGRGSTQPYVPNTTNENRAINRRVAIVV 157
>gi|261211899|ref|ZP_05926186.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio sp.
RC341]
gi|260839249|gb|EEX65881.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio sp.
RC341]
Length = 172
Score = 88.7 bits (218), Expect = 2e-16, Method: Composition-based stats.
Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 19/171 (11%)
Query: 1 MQYST----IFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQF------------ 44
MQ + + I L + + + S D+ S + +
Sbjct: 1 MQLNKVLKGLLIALPVLAVTACSSSDDAANSGSQTNQAAVSTVDSNGLNAQGQLTEQELK 60
Query: 45 --SSSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIAL 101
+ +++F + +I +L+ + ++ +EGHADE G+ +IAL
Sbjct: 61 EQALRENQTIYFAFDNATIASDYEAMLAAHAAYLVKNPSLKVTVEGHADERGTPEYNIAL 120
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
G RRA AV Y A G+ A ++ + SYG+E P V G E+AYAKNRRA++
Sbjct: 121 GERRAQAVSKYLEALGVQAGQISIVSYGEEKPLVLGQSEEAYAKNRRAVLV 171
>gi|256845382|ref|ZP_05550840.1| outer membrane porin F [Fusobacterium sp. 3_1_36A2]
gi|256718941|gb|EEU32496.1| outer membrane porin F [Fusobacterium sp. 3_1_36A2]
Length = 396
Score = 88.7 bits (218), Expect = 2e-16, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 2/111 (1%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALG 102
++ + FD Y +RP +VL NL L++ D F ++GH D S + L
Sbjct: 284 LLITLDSGILFDVDKYDLRPEAEEVLKNLAIVLKEADIKAFEVDGHTDSDASDKHNQILS 343
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA AV N+ ++GI+A + + YG+ P + KNRR + +
Sbjct: 344 ENRANAVKNFLTSQGITAE-ITIKGYGESRPIASNDTAEGKQKNRRVEIII 393
>gi|284007877|emb|CBA73797.1| peptidoglycan-associated lipoprotein [Arsenophonus nasoniae]
Length = 180
Score = 88.7 bits (218), Expect = 2e-16, Method: Composition-based stats.
Identities = 52/163 (31%), Positives = 83/163 (50%), Gaps = 12/163 (7%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDTVLNESSL-------QEQFSSSVG 49
MQ + + + L + + + S D + + + +SL Q+
Sbjct: 16 MQLNKVLKGLMLALPMLAVAACSSKKGNDKTGTENNVADSNASLSAEQLAHQQMQELQSN 75
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYA 108
+ V+F Y + P Q+L ++L + +EGHADE G+ +IALG RRA A
Sbjct: 76 NIVYFGFDKYDVTPEYAQLLDQHATFLRGNPSVKITVEGHADEKGTPEYNIALGERRANA 135
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
V Y ++G++ ++ + SYGKE P+V GHDE AYAKNRRA++
Sbjct: 136 VKMYLQSKGVNGEQIAIVSYGKEKPAVLGHDESAYAKNRRAVL 178
>gi|289766688|ref|ZP_06526066.1| outer membrane protein [Fusobacterium sp. D11]
gi|289718243|gb|EFD82255.1| outer membrane protein [Fusobacterium sp. D11]
Length = 180
Score = 88.7 bits (218), Expect = 2e-16, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 70/160 (43%), Gaps = 8/160 (5%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKIS------SPDTVLNESSLQEQFSSSVGDSVFF 54
M + +F L A+ + +++ + I +LN + +E S+ F
Sbjct: 3 MLFLLVF-SLPALAVQALTTTQMRENSIRINALELKDIDILNSEAPKEMTIVLDERSLNF 61
Query: 55 DTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
D ++ +L N+ ++E+++ + I GH D +GS + L RRA AV +
Sbjct: 62 DFDKSIVKAQYFDLLKNIKEFVEQNNYEITIVGHTDSIGSNQYNFGLSRRRAEAVKAKLL 121
Query: 115 ARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G++ R+ + + G+E P ++ A+NRR L
Sbjct: 122 EFGLAEDRIVGIEAMGEEQPIATNATKEGRAQNRRVEFKL 161
>gi|206563399|ref|YP_002234162.1| putative peptidoglycan-associated lipoprotein [Burkholderia
cenocepacia J2315]
gi|198039439|emb|CAR55406.1| putative peptidoglycan-associated lipoprotein [Burkholderia
cenocepacia J2315]
Length = 163
Score = 88.7 bits (218), Expect = 2e-16, Method: Composition-based stats.
Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 9/163 (5%)
Query: 1 MQYSTIFIILSAITMMSIS--GIDNLDTKISSPDT------VLNESSLQEQFSSSVGDSV 52
M +L+ +++ + ++P+ + L S S+
Sbjct: 1 MSKMNRIAVLATFVLLAGCHNAAKTPENAGAAPEPSSETVATVTADDLNNPNSPLAKRSI 60
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFN 111
+FD YS++P +L +L H LI+G+ DE G+ ++ALG RR+ AV +
Sbjct: 61 YFDFDQYSVKPEFQSLLQAHADYLRSHPARHVLIQGNTDERGTSEYNLALGQRRSQAVAS 120
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G+ A++++ S GKE P GHDE+A+A+NRRA + +
Sbjct: 121 ALQTLGVPATQLEAVSLGKEKPVALGHDEEAWAQNRRADLVYR 163
>gi|115526690|ref|YP_783601.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
BisA53]
gi|115520637|gb|ABJ08621.1| OmpA/MotB domain protein [Rhodopseudomonas palustris BisA53]
Length = 165
Score = 88.7 bits (218), Expect = 2e-16, Method: Composition-based stats.
Identities = 53/146 (36%), Positives = 73/146 (50%), Gaps = 1/146 (0%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
+L+ M N Q+ F +VGD VFF++ + P I
Sbjct: 16 VLAVALSMGACANKNPLGGADGSMASAASPGSQQDFVVNVGDRVFFESDQTDLSPQAIAT 75
Query: 69 LSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
L W + + F IEGHADE G+R +IALG RRA +V +Y +RGI ASRM+ S
Sbjct: 76 LEKQAQWLQQYNRYAFTIEGHADERGTREYNIALGARRAQSVRSYLASRGIDASRMRTIS 135
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFL 153
YGKE P +D +++NRRA+ L
Sbjct: 136 YGKERPVAVCNDISCWSQNRRAVTVL 161
>gi|92115424|ref|YP_575352.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043]
gi|91798514|gb|ABE60653.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043]
Length = 226
Score = 88.7 bits (218), Expect = 2e-16, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 1/113 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNSSIA 100
+ ++ SV FD S +++ Q L++ E + G+ D GS + +
Sbjct: 107 DNIVLNMPSSVTFDVDSSALKTPARQALNDATAVMREYPKTRINVAGYTDSTGSADYNQR 166
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RRA AV +Y GI+A+R+ YG+ P E A+NRR + L
Sbjct: 167 LSERRAQAVADYLGQGGIAANRINTVGYGERQPVASNDTESGRAQNRRVEITL 219
>gi|220918973|ref|YP_002494277.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
gi|219956827|gb|ACL67211.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 544
Score = 88.7 bits (218), Expect = 2e-16, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 59/143 (41%), Gaps = 7/143 (4%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSS-----SVGDSVFFDTSSYSIRPADIQVLSNLGS-- 74
D+ D P N+ E+ + + V+FDT +I+ +L ++
Sbjct: 401 DDKDRCPDKPGIPENQGCPPERAEIKAGKIDIKEKVYFDTGKDTIKAKSNALLDDVAKLV 460
Query: 75 WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
IEGH D GS ++ AL +RA AV +Y V++G+ ASR++ +G + P
Sbjct: 461 AANPQVGVVTIEGHTDSTGSAATNRALSQKRAEAVKDYLVSKGVDASRLEAKGFGPDQPV 520
Query: 135 VYGHDEDAYAKNRRAIVFLKGCR 157
NRR ++
Sbjct: 521 ESNKTAKGREANRRVEFTIQNAN 543
>gi|53718641|ref|YP_107627.1| OmpA family transmembrane protein [Burkholderia pseudomallei
K96243]
gi|53725212|ref|YP_102481.1| ompA family protein [Burkholderia mallei ATCC 23344]
gi|67639751|ref|ZP_00438587.1| OmpA family protein [Burkholderia mallei GB8 horse 4]
gi|121600283|ref|YP_993611.1| ompA family protein [Burkholderia mallei SAVP1]
gi|124385832|ref|YP_001028928.1| ompA family protein [Burkholderia mallei NCTC 10229]
gi|126440263|ref|YP_001058104.1| ompA family protein [Burkholderia pseudomallei 668]
gi|126449467|ref|YP_001081159.1| ompA family protein [Burkholderia mallei NCTC 10247]
gi|126452105|ref|YP_001065339.1| ompA family protein [Burkholderia pseudomallei 1106a]
gi|134281074|ref|ZP_01767783.1| OmpA family protein [Burkholderia pseudomallei 305]
gi|167003046|ref|ZP_02268836.1| OmpA family protein [Burkholderia mallei PRL-20]
gi|167718574|ref|ZP_02401810.1| ompA family protein [Burkholderia pseudomallei DM98]
gi|167814738|ref|ZP_02446418.1| ompA family protein [Burkholderia pseudomallei 91]
gi|167901748|ref|ZP_02488953.1| ompA family protein [Burkholderia pseudomallei NCTC 13177]
gi|217419903|ref|ZP_03451409.1| ompA family protein [Burkholderia pseudomallei 576]
gi|226194470|ref|ZP_03790068.1| ompA family protein [Burkholderia pseudomallei Pakistan 9]
gi|237811323|ref|YP_002895774.1| OmpA family protein [Burkholderia pseudomallei MSHR346]
gi|242316655|ref|ZP_04815671.1| ompA family protein [Burkholderia pseudomallei 1106b]
gi|254177848|ref|ZP_04884503.1| ompA family protein [Burkholderia mallei ATCC 10399]
gi|254190801|ref|ZP_04897308.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237]
gi|254196800|ref|ZP_04903224.1| ompA family protein [Burkholderia pseudomallei S13]
gi|254261713|ref|ZP_04952767.1| ompA family protein [Burkholderia pseudomallei 1710a]
gi|254298274|ref|ZP_04965726.1| ompA family protein [Burkholderia pseudomallei 406e]
gi|254357860|ref|ZP_04974133.1| OmpA family protein [Burkholderia mallei 2002721280]
gi|52209055|emb|CAH34995.1| putative OmpA family transmembrane protein [Burkholderia
pseudomallei K96243]
gi|52428635|gb|AAU49228.1| ompA family protein [Burkholderia mallei ATCC 23344]
gi|121229093|gb|ABM51611.1| ompA family protein [Burkholderia mallei SAVP1]
gi|124293852|gb|ABN03121.1| ompA family protein [Burkholderia mallei NCTC 10229]
gi|126219756|gb|ABN83262.1| ompA family protein [Burkholderia pseudomallei 668]
gi|126225747|gb|ABN89287.1| ompA family protein [Burkholderia pseudomallei 1106a]
gi|126242337|gb|ABO05430.1| ompA family protein [Burkholderia mallei NCTC 10247]
gi|134247380|gb|EBA47465.1| OmpA family protein [Burkholderia pseudomallei 305]
gi|148026987|gb|EDK85008.1| OmpA family protein [Burkholderia mallei 2002721280]
gi|157808098|gb|EDO85268.1| ompA family protein [Burkholderia pseudomallei 406e]
gi|157938476|gb|EDO94146.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237]
gi|160698887|gb|EDP88857.1| ompA family protein [Burkholderia mallei ATCC 10399]
gi|169653543|gb|EDS86236.1| ompA family protein [Burkholderia pseudomallei S13]
gi|217397207|gb|EEC37223.1| ompA family protein [Burkholderia pseudomallei 576]
gi|225933555|gb|EEH29544.1| ompA family protein [Burkholderia pseudomallei Pakistan 9]
gi|237503911|gb|ACQ96229.1| OmpA family protein [Burkholderia pseudomallei MSHR346]
gi|238520349|gb|EEP83810.1| OmpA family protein [Burkholderia mallei GB8 horse 4]
gi|242139894|gb|EES26296.1| ompA family protein [Burkholderia pseudomallei 1106b]
gi|243061351|gb|EES43537.1| OmpA family protein [Burkholderia mallei PRL-20]
gi|254220402|gb|EET09786.1| ompA family protein [Burkholderia pseudomallei 1710a]
Length = 215
Score = 88.7 bits (218), Expect = 2e-16, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 56/140 (40%), Gaps = 1/140 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
I N + +V SV F T Y+I PA +L++L + +
Sbjct: 74 AIKNKLAPSAQQTGTQVTEQPDGSLKLNVPSSVTFATDQYAITPAFTPLLNDLATTLNQN 133
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ G+ D GS + L RA +V N RG++A+R+ G P
Sbjct: 134 PQITASVVGYTDSTGSAAHNQTLSQNRAQSVVNALAQRGVAANRLSAQGMGASNPIADNA 193
Query: 139 DEDAYAKNRRAIVFLKGCRA 158
E A+NRR ++L+ +A
Sbjct: 194 TEAGRAQNRRVEIYLRAPQA 213
>gi|308270955|emb|CBX27565.1| hypothetical protein N47_H23870 [uncultured Desulfobacterium sp.]
Length = 229
Score = 88.7 bits (218), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 57/136 (41%), Gaps = 1/136 (0%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-WLE 77
+ N + ++ + T + +++ + + + +S ++ P L + +
Sbjct: 89 AASINREQQVLAQATADSSKKVRDVLTVTFKSDFLYAVNSSTLFPGAYDELDRVAKVINQ 148
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
D + GH D GS + L +RA AV N V+RG++ASR+ YG+
Sbjct: 149 YPDTRIQVGGHTDSTGSAEYNQKLSEQRAQAVKNALVSRGVNASRISAIGYGENKSIASN 208
Query: 138 HDEDAYAKNRRAIVFL 153
E +NRR + +
Sbjct: 209 ETEAGRQQNRRVEIRI 224
>gi|298372486|ref|ZP_06982476.1| OmpA family protein [Bacteroidetes oral taxon 274 str. F0058]
gi|298275390|gb|EFI16941.1| OmpA family protein [Bacteroidetes oral taxon 274 str. F0058]
Length = 567
Score = 88.7 bits (218), Expect = 2e-16, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
+++F+T+ S+ + L + E + + I GH D GS ++ L RA +V
Sbjct: 463 NIYFNTNDTSLTAESNKELDKQAKFLKENPNVNITIVGHTDSRGSDEYNLKLSEGRAVSV 522
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ RGI+ R+K G+ P E+ A+NRR + ++
Sbjct: 523 MRALIDRGIAPERLKAEGRGETQPVASNETEEGRAENRRIEIEVR 567
>gi|34763981|ref|ZP_00144872.1| Outer membrane porin F [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|27886240|gb|EAA23525.1| Outer membrane porin F [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
Length = 315
Score = 88.7 bits (218), Expect = 2e-16, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 2/111 (1%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALG 102
++ + FD Y +RP +VL NL L++ D F ++GH D S + L
Sbjct: 203 LLITLDSGILFDVDKYDLRPEAEEVLKNLAIVLKEADIKAFEVDGHTDSDASDKHNRILS 262
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA AV N+ ++GI+A + + YG+ P + KNRR + +
Sbjct: 263 ENRANAVKNFLTSQGITAE-ITIKGYGESRPIASNDTAEGKQKNRRVEIII 312
>gi|107101208|ref|ZP_01365126.1| hypothetical protein PaerPA_01002240 [Pseudomonas aeruginosa PACS2]
Length = 331
Score = 88.7 bits (218), Expect = 2e-16, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 55/138 (39%), Gaps = 4/138 (2%)
Query: 21 IDNLDTKISSPDTVLNES--SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ V V FD ++ + NL ++++
Sbjct: 190 CDNVDKCPDTPANVTVDANGCPAVAEVVRVQLDVKFDFDKSKVKENSYADIKNLADFMKQ 249
Query: 79 HDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVY 136
+ +EGH D +G+ + L RRA AV + V G+ R+ YG+ P
Sbjct: 250 YPSTSTTVEGHTDSVGTDAYNQKLSERRANAVRDVLVNEYGVEGGRVNAVGYGESRPVAD 309
Query: 137 GHDEDAYAKNRRAIVFLK 154
+ A NRR ++
Sbjct: 310 NATAEGRAINRRVEAEVE 327
>gi|294782096|ref|ZP_06747422.1| outer membrane porin F [Fusobacterium sp. 1_1_41FAA]
gi|294480737|gb|EFG28512.1| outer membrane porin F [Fusobacterium sp. 1_1_41FAA]
Length = 183
Score = 88.7 bits (218), Expect = 2e-16, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 68/181 (37%), Gaps = 27/181 (14%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQE------------------ 42
M+ +++ A+ + + S + N+ ++++
Sbjct: 1 MKKKIFAVLMLALLVTACSSSKKVIKNTGVGVDSANKYAIEDTEANKKPLEDIIVFDQEG 60
Query: 43 --------QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELG 93
S+ + + FD Y ++ L+ L E D I+G+ D +G
Sbjct: 61 VTIRREGNNLILSMPELILFDFDKYVVKDGIKPSLATLAKALGENKDIHIKIDGYTDFIG 120
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ ++ L ++RA A+ + +++G S + + YG++ P+ ++NRR +
Sbjct: 121 TEAYNLDLSVKRARAIKEFLISKGAIGSNISIEGYGEQNPADTNQTAAGRSRNRRVEFII 180
Query: 154 K 154
Sbjct: 181 S 181
>gi|237738475|ref|ZP_04568956.1| outer membrane porin F [Fusobacterium mortiferum ATCC 9817]
gi|229420355|gb|EEO35402.1| outer membrane porin F [Fusobacterium mortiferum ATCC 9817]
Length = 185
Score = 88.7 bits (218), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/182 (23%), Positives = 74/182 (40%), Gaps = 27/182 (14%)
Query: 3 YSTIFIILSAITMMSISGI----------DNLDTKISSPDTVLNESSLQE---------- 42
IF++LS + +++ +T+ D E L++
Sbjct: 1 MKKIFMVLSLVGVIAGCTSTQGQFKEITIKESETQYILEDVTTTEKPLEDIIVFNEEGVV 60
Query: 43 ------QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
S+ + FD S ++ + L+ LG E D I+GH D +G+
Sbjct: 61 IRKDGNNLVLSMPVEILFDFDSSKVKEGVKESLNTLGKALAENKDIKLKIDGHTDYIGTE 120
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
++ L L+RA ++ NY + RG+SA+ + + YGK+ P E AKNRR +
Sbjct: 121 QYNLNLSLKRANSIKNYLIGRGVSANNISIEGYGKQNPVANNSTEAGRAKNRRVEFIISR 180
Query: 156 CR 157
+
Sbjct: 181 DK 182
>gi|126725522|ref|ZP_01741364.1| OmpA/MotB [Rhodobacterales bacterium HTCC2150]
gi|126704726|gb|EBA03817.1| OmpA/MotB [Rhodobacterales bacterium HTCC2150]
Length = 170
Score = 88.7 bits (218), Expect = 2e-16, Method: Composition-based stats.
Identities = 51/166 (30%), Positives = 81/166 (48%), Gaps = 11/166 (6%)
Query: 1 MQYSTIFIILSAITMMSIS----------GIDNLDTKISSPDTVLNESSLQEQFSSSVGD 50
M+ T I+++ ++ G N D ++ + F ++GD
Sbjct: 1 MKNYTKLILVALSLTLAACSNSPLSGGFGGNQNGLDGPGVGDGSADDPTSVAYFMQTIGD 60
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAV 109
V FD ++ A +LS +WL + L+EGHADE G+R ++ALG RRA A
Sbjct: 61 RVLFDVDQSTLNDAGRTLLSQQAAWLNSNPAYMVLVEGHADEQGTRAYNLALGDRRATAA 120
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
Y V++G+ ASR+ ++GKE P E Y++NRRA++ L G
Sbjct: 121 RAYLVSQGVDASRLSTVTFGKERPLEICSQEACYSQNRRAVIILSG 166
>gi|78062395|ref|YP_372303.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383]
gi|77970280|gb|ABB11659.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
Length = 163
Score = 88.7 bits (218), Expect = 2e-16, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 77/163 (47%), Gaps = 9/163 (5%)
Query: 1 MQYSTIFIILSAITMMSIS--------GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV 52
M + F +L+ + +++ T S + L S S+
Sbjct: 1 MSKTNRFAVLATVVLLAGCHHAAKTPENAGMAPTPSSEAVATVTADELNNPNSPLAKRSI 60
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFN 111
+FD YS++P +L +L H LI+G+ DE G+ ++ALG RR+ AV +
Sbjct: 61 YFDFDQYSVKPEYQSLLQAHADYLRSHPSRHVLIQGNTDERGTSEYNLALGQRRSQAVMS 120
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G+ A++++ S GKE P GHDED++A+NRRA + +
Sbjct: 121 GLETLGVPATQLEAVSLGKEKPVALGHDEDSWAQNRRADLVYR 163
>gi|91782349|ref|YP_557555.1| OmpA/MotB family outer membrane protein [Burkholderia xenovorans
LB400]
gi|296162308|ref|ZP_06845102.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
gi|91686303|gb|ABE29503.1| outer membrane protein, OmpA/MotB family [Burkholderia xenovorans
LB400]
gi|295887462|gb|EFG67286.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
Length = 217
Score = 88.7 bits (218), Expect = 2e-16, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 1/132 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF-L 84
+ + ++ SV FDT+SY+++P+ VL L ++++
Sbjct: 80 SGATKGTGTQITEQPDGSLKLNIPSSVTFDTNSYAVKPSFAPVLDQLAQTMQQNPELIAQ 139
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+ GH D G + L + RA +V Y RG++ R+ G+ P + E A
Sbjct: 140 VVGHTDSTGQPAYNQTLSVNRAESVTGYLGQRGVAPQRLSAQGMGQTQPIADNNTEAGRA 199
Query: 145 KNRRAIVFLKGC 156
NRR ++L+
Sbjct: 200 ANRRVEIYLRAT 211
>gi|305665914|ref|YP_003862201.1| Thrombospondin type 3 repeat:OmpA/MotB [Maribacter sp. HTCC2170]
gi|88710689|gb|EAR02921.1| Thrombospondin type 3 repeat:OmpA/MotB [Maribacter sp. HTCC2170]
Length = 446
Score = 88.7 bits (218), Expect = 2e-16, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 6/136 (4%)
Query: 22 DNLDTKISSPDTVLN-----ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW- 75
D D TV N + ++ + ++ FDT SI+ V+ ++
Sbjct: 307 DKDDQCPDVAGTVANNGCPEVTEEVQKQLNDYARTILFDTGKSSIKAESTSVMVDIIQIL 366
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
E F +EGH D +GS + L RA +V ++ + +GI +SR+ YG++ P
Sbjct: 367 SEYPTAKFTVEGHTDSVGSAKLNQTLSESRANSVRDFLIDKGIGSSRLSAIGYGEDKPIA 426
Query: 136 YGHDEDAYAKNRRAIV 151
+ +NRR +
Sbjct: 427 TNNTRSGRKQNRRVEI 442
>gi|325923404|ref|ZP_08185069.1| peptidoglycan-associated lipoprotein [Xanthomonas gardneri ATCC
19865]
gi|325546119|gb|EGD17308.1| peptidoglycan-associated lipoprotein [Xanthomonas gardneri ATCC
19865]
Length = 172
Score = 88.7 bits (218), Expect = 2e-16, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 16/168 (9%)
Query: 1 MQYSTIFIILSAITMMSISGIDNL---------------DTKISSPDTVLNESSLQEQFS 45
M ST +++S +++ ++G + L + +
Sbjct: 1 MNKSTRVLLVSLLSVAVLAGCSKKVKETPPAPTDTTTGSSVPTGPATSGLYGPGDLDTDA 60
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLR 104
V+FD S++P +++ +L ++G+ADE GSR ++ LG R
Sbjct: 61 CLRQRVVYFDLDQDSLKPEFQAIMACHAKYLRDRPSSRITLQGNADERGSREYNMGLGER 120
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
R AV + A G SAS++ V SYG+E P E +++NRR +
Sbjct: 121 RGNAVSSSLQAAGGSASQLTVVSYGEERPVCTETSESCWSQNRRVEIV 168
>gi|224438536|ref|ZP_03659456.1| hypothetical protein HcinC1_11101 [Helicobacter cinaedi CCUG 18818]
gi|313144962|ref|ZP_07807155.1| membrane-protein map18 [Helicobacter cinaedi CCUG 18818]
gi|313129993|gb|EFR47610.1| membrane-protein map18 [Helicobacter cinaedi CCUG 18818]
Length = 157
Score = 88.7 bits (218), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 68/156 (43%), Gaps = 4/156 (2%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTK--ISSPDTVLNESSLQEQFSSSVGDSVFFDTSS 58
M+ +L+A+ + S + DT ++ N L ++ V FD
Sbjct: 1 MKKYIAIGVLAALMSVGCSEPEAADTGSGTAASSGQDNFVDLAADTAAGYA-KVLFDFDK 59
Query: 59 YSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI 118
Y IR L + L+ ++EGH D GS + ALG +RA AV N RG+
Sbjct: 60 YDIRQDMEDGLEKSVAALKSTGAKVVLEGHTDSYGSDAYNYALGTKRANAVKNALTTRGV 119
Query: 119 SASRMKVTSYGKEMPSV-YGHDEDAYAKNRRAIVFL 153
SAS++K SYG+ P+ G + +NRR L
Sbjct: 120 SASQIKTVSYGESKPACTSGDTPECNQENRRVEFKL 155
>gi|49082800|gb|AAT50800.1| PA2900 [synthetic construct]
Length = 270
Score = 88.7 bits (218), Expect = 2e-16, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 61/140 (43%), Gaps = 2/140 (1%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ ++S L+ + ++GD V FD + ++PA + L +L+ +
Sbjct: 125 SVQEQGQRLSEEIASLSTEETERGLVLTLGD-VLFDFNRAELKPAANRTALKLVQFLQLN 183
Query: 80 DCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ IEG+ D +G R +++ L RA AV + G+ +RM+V YG+ P
Sbjct: 184 PRRVIRIEGYTDSVGDRQANLDLSRERAQAVADVLADLGVDPARMQVVGYGEAFPVTDNA 243
Query: 139 DEDAYAKNRRAIVFLKGCRA 158
A+NRR + +
Sbjct: 244 SNRGRAQNRRVEIVFSNDKG 263
>gi|330814393|ref|YP_004358632.1| 18K peptidoglycan-associated outer membrane lipoprotein [Candidatus
Pelagibacter sp. IMCC9063]
gi|327487488|gb|AEA81893.1| 18K peptidoglycan-associated outer membrane lipoprotein [Candidatus
Pelagibacter sp. IMCC9063]
Length = 155
Score = 88.7 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 46/150 (30%), Positives = 80/150 (53%), Gaps = 3/150 (2%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIR 62
+T +++ I + + S K+ V + + ++ V D VFF T+S +
Sbjct: 6 KNTFLVVILGIFISACSTTAKKAGKV---GDVYTGTDTVKYLATGVADRVFFATNSTGLT 62
Query: 63 PADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASR 122
A L+ +++ +IEGHADE G+R ++ALG RRA A +Y +A+G++ S
Sbjct: 63 SAAKTTLTKQAGYIKSSKIYVVIEGHADERGTREYNLALGERRANAARDYLMAKGVAKSS 122
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+KV SYGKE P+ + A+++NRR++
Sbjct: 123 IKVISYGKERPANTDSSKLAWSQNRRSVTV 152
>gi|319783265|ref|YP_004142741.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317169153|gb|ADV12691.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 216
Score = 88.7 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
T ++ + +Q ++ + F++ +++P QVL+++ + + GH D
Sbjct: 90 GTGVSVTRSGDQIILNMPSDITFNSDQDAVKPGFYQVLNSVALVLKKFKQTTVDVFGHTD 149
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + L RRA AV NY +G+ R VT +GK P + A+NRR
Sbjct: 150 STGGDQHNFDLSQRRALAVANYLSGQGVDQRRFAVTGFGKTRPVASNATAEGRAQNRRVE 209
Query: 151 VFLK 154
+ L
Sbjct: 210 IQLS 213
>gi|170691850|ref|ZP_02883014.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
gi|170143134|gb|EDT11298.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
Length = 168
Score = 88.7 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 63/163 (38%), Gaps = 3/163 (1%)
Query: 1 MQYSTIFII--LSAITMMSISGIDNLDTKIS-SPDTVLNESSLQEQFSSSVGDSVFFDTS 57
M+ +S + M S N DT+ S + + + + + + + + FD
Sbjct: 1 MKKLLAASACAMSVLLMAGCSAPLNRDTETSLNRAAGIEVAPVADGVAVKLPEKALFDFD 60
Query: 58 SYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG 117
++R V+ L++ ++EG+ D +G+ + L RA AV V RG
Sbjct: 61 KSAVRADASAVVDRSAVLLKRSKKPIIVEGYTDNVGTLEYNQQLSEARAVAVGYALVGRG 120
Query: 118 ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
+ R++ P + A NRR + ++G T
Sbjct: 121 VPMERVRTKGNAYNNPIASNDTPEGRALNRRTEIVVRGETMET 163
>gi|254787334|ref|YP_003074763.1| peptidoglycan-associated lipoprotein [Teredinibacter turnerae
T7901]
gi|237684812|gb|ACR12076.1| peptidoglycan-associated lipoprotein [Teredinibacter turnerae
T7901]
Length = 166
Score = 88.7 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 68/162 (41%), Gaps = 11/162 (6%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQ-----------FSSSVGDS 51
++ +++ +++ + S + + V
Sbjct: 5 LKSLITLVAVFGLLAGCSSSTKKDETDSAANDSASTDTSAYEDTTETVDPYDALNGVATV 64
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
+FD +R L L+ +EGHADE G+R ++ALG RRA AV +
Sbjct: 65 FYFDFDQSILRADARSALMVYAEVLKAAPKSVRLEGHADERGTREYNMALGERRANAVRD 124
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ + +G+ +S ++ SYG+E P+ G E ++A NRR + L
Sbjct: 125 FLILQGVDSSLIETVSYGEERPAQMGSSESSWAMNRRVEIVL 166
>gi|17986623|ref|NP_539257.1| peptidoglycan-associated lipoprotein [Brucella melitensis bv. 1
str. 16M]
gi|23502553|ref|NP_698680.1| Pal family lipoprotein [Brucella suis 1330]
gi|62290567|ref|YP_222360.1| Pal family lipoprotein [Brucella abortus bv. 1 str. 9-941]
gi|82700483|ref|YP_415057.1| outer membrane protein MotY [Brucella melitensis biovar Abortus
2308]
gi|148560405|ref|YP_001259548.1| outer membrane lipoprotein Omp16 [Brucella ovis ATCC 25840]
gi|161619624|ref|YP_001593511.1| peptidoglycan-associated lipoprotein [Brucella canis ATCC 23365]
gi|163845274|ref|YP_001622929.1| peptidoglycan-associated lipoprotein [Brucella suis ATCC 23445]
gi|189024786|ref|YP_001935554.1| outer membrane protein [Brucella abortus S19]
gi|225853150|ref|YP_002733383.1| peptidoglycan-associated lipoprotein [Brucella melitensis ATCC
23457]
gi|237816073|ref|ZP_04595069.1| peptidoglycan-associated lipoprotein [Brucella abortus str. 2308 A]
gi|254694357|ref|ZP_05156185.1| peptidoglycan-associated lipoprotein [Brucella abortus bv. 3 str.
Tulya]
gi|254698015|ref|ZP_05159843.1| peptidoglycan-associated lipoprotein [Brucella abortus bv. 2 str.
86/8/59]
gi|254703474|ref|ZP_05165302.1| peptidoglycan-associated lipoprotein [Brucella suis bv. 3 str. 686]
gi|254708437|ref|ZP_05170265.1| peptidoglycan-associated lipoprotein [Brucella pinnipedialis
M163/99/10]
gi|254708710|ref|ZP_05170521.1| peptidoglycan-associated lipoprotein [Brucella pinnipedialis B2/94]
gi|254719698|ref|ZP_05181509.1| peptidoglycan-associated lipoprotein [Brucella sp. 83/13]
gi|254730899|ref|ZP_05189477.1| peptidoglycan-associated lipoprotein [Brucella abortus bv. 4 str.
292]
gi|256030236|ref|ZP_05443850.1| peptidoglycan-associated lipoprotein [Brucella pinnipedialis
M292/94/1]
gi|256045306|ref|ZP_05448200.1| peptidoglycan-associated lipoprotein [Brucella melitensis bv. 1
str. Rev.1]
gi|256061733|ref|ZP_05451870.1| peptidoglycan-associated lipoprotein [Brucella neotomae 5K33]
gi|256114264|ref|ZP_05455009.1| peptidoglycan-associated lipoprotein [Brucella melitensis bv. 3
str. Ether]
gi|256160411|ref|ZP_05458100.1| peptidoglycan-associated lipoprotein [Brucella ceti M490/95/1]
gi|256255617|ref|ZP_05461153.1| peptidoglycan-associated lipoprotein [Brucella ceti B1/94]
gi|256263357|ref|ZP_05465889.1| peptidoglycan-associated lipoprotein [Brucella melitensis bv. 2
str. 63/9]
gi|256370104|ref|YP_003107615.1| lipoprotein, Pal family [Brucella microti CCM 4915]
gi|260167911|ref|ZP_05754722.1| lipoprotein, Pal family [Brucella sp. F5/99]
gi|260547188|ref|ZP_05822926.1| peptidoglycan-associated lipoprotein [Brucella abortus NCTC 8038]
gi|260565803|ref|ZP_05836286.1| outer membrane lipoprotein omp16 [Brucella melitensis bv. 1 str.
16M]
gi|260568781|ref|ZP_05839249.1| peptidoglycan-associated lipoprotein [Brucella suis bv. 4 str. 40]
gi|260758616|ref|ZP_05870964.1| outer membrane lipoprotein [Brucella abortus bv. 4 str. 292]
gi|260762448|ref|ZP_05874785.1| outer membrane lipoprotein [Brucella abortus bv. 2 str. 86/8/59]
gi|261214665|ref|ZP_05928946.1| outer membrane lipoprotein [Brucella abortus bv. 3 str. Tulya]
gi|261222819|ref|ZP_05937100.1| peptidoglycan-associated lipoprotein [Brucella ceti B1/94]
gi|261315938|ref|ZP_05955135.1| peptidoglycan-associated lipoprotein [Brucella pinnipedialis
M163/99/10]
gi|261316200|ref|ZP_05955397.1| peptidoglycan-associated lipoprotein [Brucella pinnipedialis B2/94]
gi|261325736|ref|ZP_05964933.1| peptidoglycan-associated lipoprotein [Brucella neotomae 5K33]
gi|261754103|ref|ZP_05997812.1| peptidoglycan-associated lipoprotein [Brucella suis bv. 3 str. 686]
gi|261757348|ref|ZP_06001057.1| peptidoglycan-associated lipoprotein [Brucella sp. F5/99]
gi|265984712|ref|ZP_06097447.1| peptidoglycan-associated lipoprotein [Brucella sp. 83/13]
gi|265987263|ref|ZP_06099820.1| peptidoglycan-associated lipoprotein [Brucella pinnipedialis
M292/94/1]
gi|265991730|ref|ZP_06104287.1| peptidoglycan-associated lipoprotein [Brucella melitensis bv. 1
str. Rev.1]
gi|265995567|ref|ZP_06108124.1| peptidoglycan-associated lipoprotein [Brucella melitensis bv. 3
str. Ether]
gi|265998778|ref|ZP_06111335.1| peptidoglycan-associated lipoprotein [Brucella ceti M490/95/1]
gi|306837843|ref|ZP_07470705.1| peptidoglycan-associated lipoprotein [Brucella sp. NF 2653]
gi|306841414|ref|ZP_07474116.1| peptidoglycan-associated lipoprotein [Brucella sp. BO2]
gi|61229452|sp|P0A3S7|OMP16_BRUME RecName: Full=Outer membrane lipoprotein omp16; AltName: Full=16.5
kDa minor OMP; Short=16 kDa OMP; AltName: Full=Minor
outer membrane protein omp16; Flags: Precursor
gi|61229453|sp|P0A3S8|OMP16_BRUSU RecName: Full=Outer membrane lipoprotein omp16; AltName: Full=16.5
kDa minor OMP; Short=16 kDa OMP; AltName: Full=Minor
outer membrane protein omp16; Flags: Precursor
gi|61229455|sp|P0A3S9|OMP16_BRUAB RecName: Full=Outer membrane lipoprotein omp16; AltName: Full=16.5
kDa minor OMP; Short=16 kDa OMP; AltName: Full=Minor
outer membrane protein omp16; Flags: Precursor
gi|13898977|gb|AAK48919.1|AF358662_6 Pal protein [Brucella melitensis]
gi|538293|gb|AAA59360.1| Omp16 [Brucella abortus bv. 1]
gi|17982237|gb|AAL51521.1| peptidoglycan-associated lipoprotein [Brucella melitensis bv. 1
str. 16M]
gi|23348553|gb|AAN30595.1| lipoprotein, Pal family [Brucella suis 1330]
gi|62196699|gb|AAX74999.1| lipoprotein, Pal family [Brucella abortus bv. 1 str. 9-941]
gi|82616584|emb|CAJ11663.1| MotY protein:Bacterial outer membrane protein:OmpA/MotB domain
[Brucella melitensis biovar Abortus 2308]
gi|148371662|gb|ABQ61641.1| outer membrane lipoprotein Omp16 (Minor outer membraneprotein
omp16) (16 kDa OMP) (16.5 kDa minor OMP) [Brucella ovis
ATCC 25840]
gi|161336435|gb|ABX62740.1| peptidoglycan-associated lipoprotein [Brucella canis ATCC 23365]
gi|163675997|gb|ABY40107.1| peptidoglycan-associated lipoprotein [Brucella suis ATCC 23445]
gi|189020358|gb|ACD73080.1| Bacterial outer membrane protein [Brucella abortus S19]
gi|225641515|gb|ACO01429.1| peptidoglycan-associated lipoprotein [Brucella melitensis ATCC
23457]
gi|237788736|gb|EEP62948.1| peptidoglycan-associated lipoprotein [Brucella abortus str. 2308 A]
gi|256000267|gb|ACU48666.1| lipoprotein, Pal family [Brucella microti CCM 4915]
gi|260095553|gb|EEW79431.1| peptidoglycan-associated lipoprotein [Brucella abortus NCTC 8038]
gi|260151176|gb|EEW86271.1| outer membrane lipoprotein omp16 [Brucella melitensis bv. 1 str.
16M]
gi|260154165|gb|EEW89247.1| peptidoglycan-associated lipoprotein [Brucella suis bv. 4 str. 40]
gi|260668934|gb|EEX55874.1| outer membrane lipoprotein [Brucella abortus bv. 4 str. 292]
gi|260672874|gb|EEX59695.1| outer membrane lipoprotein [Brucella abortus bv. 2 str. 86/8/59]
gi|260916272|gb|EEX83133.1| outer membrane lipoprotein [Brucella abortus bv. 3 str. Tulya]
gi|260921403|gb|EEX88056.1| peptidoglycan-associated lipoprotein [Brucella ceti B1/94]
gi|261295423|gb|EEX98919.1| peptidoglycan-associated lipoprotein [Brucella pinnipedialis B2/94]
gi|261301716|gb|EEY05213.1| peptidoglycan-associated lipoprotein [Brucella neotomae 5K33]
gi|261304964|gb|EEY08461.1| peptidoglycan-associated lipoprotein [Brucella pinnipedialis
M163/99/10]
gi|261737332|gb|EEY25328.1| peptidoglycan-associated lipoprotein [Brucella sp. F5/99]
gi|261743856|gb|EEY31782.1| peptidoglycan-associated lipoprotein [Brucella suis bv. 3 str. 686]
gi|262553467|gb|EEZ09236.1| peptidoglycan-associated lipoprotein [Brucella ceti M490/95/1]
gi|262766851|gb|EEZ12469.1| peptidoglycan-associated lipoprotein [Brucella melitensis bv. 3
str. Ether]
gi|263002686|gb|EEZ15089.1| peptidoglycan-associated lipoprotein [Brucella melitensis bv. 1
str. Rev.1]
gi|263093357|gb|EEZ17426.1| peptidoglycan-associated lipoprotein [Brucella melitensis bv. 2
str. 63/9]
gi|264659460|gb|EEZ29721.1| peptidoglycan-associated lipoprotein [Brucella pinnipedialis
M292/94/1]
gi|264663304|gb|EEZ33565.1| peptidoglycan-associated lipoprotein [Brucella sp. 83/13]
gi|306288520|gb|EFM59872.1| peptidoglycan-associated lipoprotein [Brucella sp. BO2]
gi|306407082|gb|EFM63299.1| peptidoglycan-associated lipoprotein [Brucella sp. NF 2653]
gi|326409709|gb|ADZ66774.1| Bacterial outer membrane protein [Brucella melitensis M28]
gi|326539416|gb|ADZ87631.1| peptidoglycan-associated lipoprotein [Brucella melitensis M5-90]
Length = 168
Score = 88.7 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 6/155 (3%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDT-----VLNESSLQEQFSSSVGDSVFFDTSSYSIR 62
I ++ ++++G + ++ + F+ +VGD +FFD S IR
Sbjct: 12 IAIALFMSLAVAGCASKKNLPNNAGDLGLGAGAATPGSSQDFTVNVGDRIFFDLDSSLIR 71
Query: 63 PADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS 121
Q LS W IEGHADE G+R ++ALG RRA A ++ +RG+ +
Sbjct: 72 ADAQQTLSKQAQWLQRYPQYSITIEGHADERGTREYNLALGQRRAAATRDFLASRGVPTN 131
Query: 122 RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
RM+ SYG E P + +++NRRA+ L G
Sbjct: 132 RMRTISYGNERPVAVCDADTCWSQNRRAVTVLNGA 166
>gi|153008551|ref|YP_001369766.1| peptidoglycan-associated lipoprotein [Ochrobactrum anthropi ATCC
49188]
gi|151560439|gb|ABS13937.1| Peptidoglycan-associated lipoprotein [Ochrobactrum anthropi ATCC
49188]
Length = 168
Score = 88.7 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 6/155 (3%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDT-----VLNESSLQEQFSSSVGDSVFFDTSSYSIR 62
I ++ ++++G + ++ + F+ +VGD +FFD S IR
Sbjct: 12 IAIALFMSLAVAGCASKKNLPNNAGDLGLGAGAATPGSSQDFTVNVGDRIFFDLDSSLIR 71
Query: 63 PADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS 121
Q LS W +EGHADE G+R ++ALG RRA A ++ +RG+ +
Sbjct: 72 ADAQQTLSKQAQWLQRYPQYSITVEGHADERGTREYNLALGQRRAAATRDFLASRGVPTN 131
Query: 122 RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
RM+ SYG E P + +++NRRA+ L G
Sbjct: 132 RMRTISYGNERPVAVCDADSCWSQNRRAVTVLNGA 166
>gi|20807043|ref|NP_622214.1| flagellar motor protein [Thermoanaerobacter tengcongensis MB4]
gi|254479612|ref|ZP_05092920.1| OmpA family protein [Carboxydibrachium pacificum DSM 12653]
gi|20515530|gb|AAM23818.1| Flagellar motor protein [Thermoanaerobacter tengcongensis MB4]
gi|214034455|gb|EEB75221.1| OmpA family protein [Carboxydibrachium pacificum DSM 12653]
Length = 237
Score = 88.7 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 49/124 (39%), Gaps = 5/124 (4%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNS--- 97
+ S+ D++ FD S + P + +VL +G L+ +EG D+L N
Sbjct: 107 ERGLVVSLQDTLLFDLGSADVHPEEKEVLIKIGKMLKNLPNYIRVEGFTDDLPIHNQKFD 166
Query: 98 -SIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+ L + RA V V I R+ YG+ P V E+ NRR + +
Sbjct: 167 SNWELSVIRATTVVKILVNEVGIEPQRISAVGYGEYRPIVPNDSEEHRRLNRRVDIVIMN 226
Query: 156 CRAN 159
N
Sbjct: 227 TEYN 230
>gi|120437695|ref|YP_863381.1| thrombospondin repeat-containing OmpA/MotB family outer membrane
protein [Gramella forsetii KT0803]
gi|117579845|emb|CAL68314.1| OmpA/MotB family outer membrane protein containing thrombospondin 3
repeats [Gramella forsetii KT0803]
Length = 472
Score = 88.7 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 53/130 (40%), Gaps = 1/130 (0%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF- 83
+ ++ + ++ + +V FD + +IRP + L ++ + ++
Sbjct: 329 EAGPAASNGCPEPTAEVISELNEYSKTVLFDLNKATIRPESEEALQSIHDIMHEYSTTIF 388
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
IEGH D GS + ++ L RA +V + GI A R+ YG+ P
Sbjct: 389 HIEGHTDSSGSDSYNMKLSKERAASVATWLEQNGIPAKRLTSEGYGETQPIATNSTAKGR 448
Query: 144 AKNRRAIVFL 153
NRR + L
Sbjct: 449 QDNRRVEISL 458
>gi|254519159|ref|ZP_05131215.1| OmpA/MotB domain-containing protein [Clostridium sp. 7_2_43FAA]
gi|226912908|gb|EEH98109.1| OmpA/MotB domain-containing protein [Clostridium sp. 7_2_43FAA]
Length = 242
Score = 88.7 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 5/139 (3%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI 85
K + + S + S D+VFFD++ I+ L ++ + L K D +
Sbjct: 99 VKDLELEGSVTTSIEERGLIISFTDNVFFDSAKADIKEELKPKLISVSNILNKIDNYVRV 158
Query: 86 EGHADELGS----RNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDE 140
EGH D L +S+ L RA V + ++ IS SR+ YG+ P E
Sbjct: 159 EGHTDNLPISTSDYHSNWQLSSVRASNVVEFLISYGSISPSRLSAVGYGEYRPVADNTAE 218
Query: 141 DAYAKNRRAIVFLKGCRAN 159
+ AKNRR + + + +
Sbjct: 219 EGRAKNRRVDILILNNKFD 237
>gi|294850947|ref|ZP_06791623.1| outer membrane lipoprotein omp16 [Brucella sp. NVSL 07-0026]
gi|294821590|gb|EFG38586.1| outer membrane lipoprotein omp16 [Brucella sp. NVSL 07-0026]
Length = 168
Score = 88.7 bits (218), Expect = 3e-16, Method: Composition-based stats.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 6/155 (3%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDT-----VLNESSLQEQFSSSVGDSVFFDTSSYSIR 62
I ++ ++++G + ++ + F+ +VGD +FFD S IR
Sbjct: 12 IAIALFMSLAVAGCASKKNLPNNAGDLGLGAGAATPGSSQDFTVNVGDRIFFDLDSSLIR 71
Query: 63 PADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS 121
Q LS W IEGHADE G+R ++ALG RRA A ++ +RG+ +
Sbjct: 72 ADAQQTLSKQAQWLQRYPQYSITIEGHADERGTREYNLALGQRRATATRDFLASRGVPTN 131
Query: 122 RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
RM+ SYG E P + +++NRRA+ L G
Sbjct: 132 RMRTISYGNERPVAVCDADTCWSQNRRAVTVLNGA 166
>gi|319944281|ref|ZP_08018557.1| outer membrane protein A [Lautropia mirabilis ATCC 51599]
gi|319742576|gb|EFV94987.1| outer membrane protein A [Lautropia mirabilis ATCC 51599]
Length = 220
Score = 88.3 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FF ++ Q L ++ + L+ + ++ GH D +G + L +R
Sbjct: 104 VTFAADTFFGFDRAVLKDEGKQKLDDIVNQLDGVALEVIVAVGHTDSVGPEAYNQRLSVR 163
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
RA AV Y V++GI A+R+ G+ P ++ AKNRR + + G R
Sbjct: 164 RAEAVKAYLVSKGIEANRVYTEGKGEAQPVADNKTKEGRAKNRRVEIEVVGSR 216
>gi|254294114|ref|YP_003060137.1| OmpA/MotB domain protein [Hirschia baltica ATCC 49814]
gi|254042645|gb|ACT59440.1| OmpA/MotB domain protein [Hirschia baltica ATCC 49814]
Length = 487
Score = 88.3 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 51/125 (40%), Gaps = 1/125 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGH 88
L++ + ++F+T +I L + ++ +EGH
Sbjct: 357 QNGNNLSDVCQDAFALIMDANRIYFETGQATISRESGDTLDKLIAVARRCNNVAIRVEGH 416
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D +G R +++ L +RA AV +Y + RG R+ YG + P+ + A+NRR
Sbjct: 417 TDNVGGREANVRLSDKRAQAVADYLIGRGYPDYRLSAIGYGSDKPAANNETPEGRARNRR 476
Query: 149 AIVFL 153
+
Sbjct: 477 IEFIV 481
>gi|15598096|ref|NP_251590.1| outer membrane protein precursor [Pseudomonas aeruginosa PAO1]
gi|116050903|ref|YP_790274.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
UCBPP-PA14]
gi|218890901|ref|YP_002439767.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
LESB58]
gi|254235886|ref|ZP_04929209.1| hypothetical protein PACG_01830 [Pseudomonas aeruginosa C3719]
gi|254241564|ref|ZP_04934886.1| hypothetical protein PA2G_02265 [Pseudomonas aeruginosa 2192]
gi|296388613|ref|ZP_06878088.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
PAb1]
gi|313108050|ref|ZP_07794215.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
39016]
gi|9948992|gb|AAG06288.1|AE004716_6 probable outer membrane protein precursor [Pseudomonas aeruginosa
PAO1]
gi|115586124|gb|ABJ12139.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126167817|gb|EAZ53328.1| hypothetical protein PACG_01830 [Pseudomonas aeruginosa C3719]
gi|126194942|gb|EAZ59005.1| hypothetical protein PA2G_02265 [Pseudomonas aeruginosa 2192]
gi|218771126|emb|CAW26891.1| probable outer membrane protein precursor [Pseudomonas aeruginosa
LESB58]
gi|310880717|gb|EFQ39311.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
39016]
Length = 269
Score = 88.3 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 61/140 (43%), Gaps = 2/140 (1%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ ++S L+ + ++GD V FD + ++PA + L +L+ +
Sbjct: 125 SVQEQGQRLSEEIASLSTEETERGLVLTLGD-VLFDFNRAELKPAANRTALKLVQFLQLN 183
Query: 80 DCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ IEG+ D +G R +++ L RA AV + G+ +RM+V YG+ P
Sbjct: 184 PRRVIRIEGYTDSVGDRQANLDLSRERAQAVADVLADLGVDPARMQVVGYGEAFPVTDNA 243
Query: 139 DEDAYAKNRRAIVFLKGCRA 158
A+NRR + +
Sbjct: 244 SNRGRAQNRRVEIVFSNDKG 263
>gi|240172204|ref|ZP_04750863.1| outer membrane protein a OmpA [Mycobacterium kansasii ATCC 12478]
Length = 332
Score = 88.3 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 54/130 (41%), Gaps = 1/130 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFL 84
+ + L ++ G ++ F S+ PAD Q+LS + + L+
Sbjct: 203 SPPPGSGAAGPCADLPAVINALTGGAIAFKNDGVSLTPADNQILSQVAAKLKACPDARVT 262
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+ G++D G + L ++RA V ++ A+G++ + YG P + A
Sbjct: 263 VNGYSDNGGGEGINFPLSVQRATTVADFLAAQGVARDHITARGYGSANPIASNDTPEGRA 322
Query: 145 KNRRAIVFLK 154
KNRR + +
Sbjct: 323 KNRRVEIVVS 332
>gi|163786812|ref|ZP_02181260.1| OmpA domain protein [Flavobacteriales bacterium ALC-1]
gi|159878672|gb|EDP72728.1| OmpA domain protein [Flavobacteriales bacterium ALC-1]
Length = 465
Score = 88.3 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 3/134 (2%)
Query: 25 DTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDC 81
+ +++ + E ++ S+ FDT S + QVL + + E
Sbjct: 332 EAGVAANNGCPEVKPTAEVVETLNTYARSILFDTGKASFKKETDQVLQAMVAIFKEYPKA 391
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
DF IEGH D +GS++++ AL RRA AV +Y +A GISA R+ YG++ P
Sbjct: 392 DFSIEGHTDSVGSKSTNQALSDRRANAVRDYLIANGISADRLTAAGYGEDNPIANNKTRA 451
Query: 142 AYAKNRRAIVFLKG 155
+NRR V LK
Sbjct: 452 GRKENRRVEVKLKN 465
>gi|237740698|ref|ZP_04571179.1| outer membrane porin F [Fusobacterium sp. 2_1_31]
gi|229422715|gb|EEO37762.1| outer membrane porin F [Fusobacterium sp. 2_1_31]
Length = 340
Score = 88.3 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 4/138 (2%)
Query: 19 SGIDNLD-TKISSPDTVLNESSLQEQFSSSVGDS-VFFDTSSYSIRPADIQVLSNLGSWL 76
+ +D K + V S++ DS + FD Y +RP D +VL NL + L
Sbjct: 201 TEVDAKPLEKPGKLEMVPPVPSIEANSLLITSDSGILFDVDKYDVRPEDKEVLKNLATVL 260
Query: 77 EKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
++ + F I+G+ D GS + L +RA +V N+ V++G++A + YG+ P
Sbjct: 261 KEMNVKNFEIDGYTDSDGSDEHNQVLSEKRANSVKNFLVSQGVTAE-ITTKGYGESKPVA 319
Query: 136 YGHDEDAYAKNRRAIVFL 153
+ KNRR + +
Sbjct: 320 SNDTAEGRQKNRRVEIII 337
>gi|149192088|ref|ZP_01870312.1| peptidoglycan-associated lipoprotein [Vibrio shilonii AK1]
gi|148834074|gb|EDL51087.1| peptidoglycan-associated lipoprotein [Vibrio shilonii AK1]
Length = 174
Score = 88.3 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 21/173 (12%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDTVLNESSLQ--------------- 41
MQ + +F I L + M + S D+ + + + +
Sbjct: 1 MQLNKVFKGLLIALPVLAMTACSSTDDAASSTGAETSNQQQQETVVATPIDENAQLSEQE 60
Query: 42 -EQFSSSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSI 99
++ + +++F + +I +L+ + + IEGHADE G+ +I
Sbjct: 61 LKEKALRENQTIYFAFDNSTIAGDYEDMLAAHAAYLSKDPSLKVTIEGHADERGTPEYNI 120
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
ALG RRA AV Y A G+ A ++ + SYG+E P V G EDAYAKNRRA++
Sbjct: 121 ALGERRAQAVAKYIQALGVQADQISIVSYGEEKPLVLGQSEDAYAKNRRAVLV 173
>gi|167580182|ref|ZP_02373056.1| ompA family protein [Burkholderia thailandensis TXDOH]
gi|257139912|ref|ZP_05588174.1| ompA family protein [Burkholderia thailandensis E264]
Length = 215
Score = 88.3 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 56/140 (40%), Gaps = 1/140 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
I N + +V SV F T Y++ PA +L++L + +
Sbjct: 74 AIKNKLAPSAQQTGTQVTEQPDGSLKLNVPSSVTFATDQYAVTPAFTPLLNDLATTLNQN 133
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ G+ D GS + L RA +V N RG++A+R+ G P
Sbjct: 134 PQITASVVGYTDSTGSAAHNQTLSQNRAQSVVNALAQRGVAATRLSAQGMGASNPIADNA 193
Query: 139 DEDAYAKNRRAIVFLKGCRA 158
E A+NRR ++L+ +A
Sbjct: 194 TEAGRAQNRRVEIYLRAPQA 213
>gi|194333585|ref|YP_002015445.1| peptidoglycan-associated lipoprotein [Prosthecochloris aestuarii
DSM 271]
gi|194311403|gb|ACF45798.1| peptidoglycan-associated lipoprotein [Prosthecochloris aestuarii
DSM 271]
Length = 153
Score = 88.3 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Query: 1 MQ-YSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSY 59
M+ +F +L +M+ G D + + + + + + D VF+ S
Sbjct: 1 MKSLKNLFRMLLVPSMLFFVGCGCCDEAV---EPEIAPAPAPAPVAVAQLDDVFYAFDSS 57
Query: 60 SIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI 118
+ A L W+ + ++EGH DE G+ +IALG RRA + +Y V G+
Sbjct: 58 VLDMASQNQLKENAQWMMDNPEAAVIVEGHCDERGTNEYNIALGERRADSAKSYLVNLGV 117
Query: 119 SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
ASRM+ SYG+E P GHDE A+AKNRRA ++
Sbjct: 118 DASRMQTVSYGEERPFDPGHDEAAWAKNRRAHFVVQ 153
>gi|292490769|ref|YP_003526208.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4]
gi|291579364|gb|ADE13821.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4]
Length = 301
Score = 88.3 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVF 110
V F S + P +L L H + IEGH D +G+ + + L RA A
Sbjct: 197 VHFAFDSAKLTPEARDILDETADSLRTHPDLEVTIEGHTDSVGNADYNKRLSQLRAEAAM 256
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
NY V++G+ SR++ YG+ P ++ A+NRR +
Sbjct: 257 NYLVSQGVDQSRLEAVGYGEAQPIASNKTKEGRAQNRRVEL 297
>gi|262194964|ref|YP_003266173.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
gi|262078311|gb|ACY14280.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
Length = 623
Score = 88.3 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 54/144 (37%), Gaps = 7/144 (4%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFS------SSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
D DT P E + + + + V+F + I P VL +
Sbjct: 475 DRQDTCPDEPGKPEFEGCPTKPGAALRDGSIEIIEKVYFPNNQARILPRSFPVLKEVARV 534
Query: 76 -LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
D + +EGH D+ G+ + L RRA +V + V +GI+A R+ +G+E P
Sbjct: 535 LNNHPDIELRVEGHTDDRGNDTYNRKLSQRRADSVVAFLVEQGIAAERLSAKGFGEERPI 594
Query: 135 VYGHDEDAYAKNRRAIVFLKGCRA 158
+NRR +
Sbjct: 595 ADNASAQGRDQNRRVEFVITNGDG 618
>gi|325275390|ref|ZP_08141334.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51]
gi|324099474|gb|EGB97376.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51]
Length = 270
Score = 88.3 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 32/144 (22%), Positives = 56/144 (38%), Gaps = 2/144 (1%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRP-ADIQVLSNLGS 74
++ + + + L ++GD V FDT S +++ A VL +
Sbjct: 122 AKLASVQQQGKWVEAQIAALASEQADRGLVMTLGD-VLFDTGSANLKNTASRTVLKLVQF 180
Query: 75 WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
IEG+ D G+ ++ L RA +V + V G+ R++V YG + P
Sbjct: 181 LQLNPHRVVRIEGYTDSTGTPEENLKLSHDRAQSVADMLVDLGVDEKRLQVEGYGDQYPI 240
Query: 135 VYGHDEDAYAKNRRAIVFLKGCRA 158
E A+NRR + +
Sbjct: 241 EANASERGRAQNRRVEIVFSDDKG 264
>gi|220934517|ref|YP_002513416.1| OmpA/MotB domain protein [Thioalkalivibrio sp. HL-EbGR7]
gi|219995827|gb|ACL72429.1| OmpA/MotB domain protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 305
Score = 88.3 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 42/118 (35%), Gaps = 4/118 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD----ELGSRNSSI 99
+ S+ F + S + + VL L + L +EG D S+
Sbjct: 157 IEVEINTSLLFASGSAQLSSEAVPVLQRLATILRDFPARIQVEGFTDTVPINTPIFPSNW 216
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA +V N F + +RM YG+ P + +NRR + + R
Sbjct: 217 ELSAARAASVVNLFSRNQLDPTRMAAIGYGEYRPIADNDTAEGRRQNRRVSIVVLAER 274
>gi|4580974|gb|AAD24561.1|AF117969_1 OprF [Pseudomonas fluorescens]
Length = 326
Score = 88.3 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 1/112 (0%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALG 102
V V FD ++P + NL ++ + + + GH D +G + L
Sbjct: 211 QVVRVELDVKFDFDKSVVKPNSYGDVKNLADFMAQYPATNVEVAGHTDSVGPDAYNQKLS 270
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RRA AV V G++ SR+ YG+ P E A NRR ++
Sbjct: 271 QRRADAVKQVLVKDGVAPSRITAVGYGESRPVADNATEAGRAVNRRVEASVE 322
>gi|319407719|emb|CBI81367.1| Outer membrane lipoprotein omp16 homolog [Bartonella sp. 1-1C]
Length = 168
Score = 88.3 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 49/151 (32%), Positives = 78/151 (51%), Gaps = 3/151 (1%)
Query: 6 IFIILSAITMMSISGIDNLDTKISSPDTVLN--ESSLQEQFSSSVGDSVFFDTSSYSIRP 63
+ I+ + + G ++D S + N ++ + F+ +VGD VFF S SI
Sbjct: 12 LTIVFCLLLTLIGCGKKSIDATNSLGQSGYNNAQAGSSQDFTVNVGDRVFFSLDSSSIES 71
Query: 64 ADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASR 122
+L+ WL IEGHADE G+R ++ALG RRA AV ++ ++ G+S+ R
Sbjct: 72 DAEYILARQAEWLLRYPHYSITIEGHADERGTREYNLALGQRRAVAVRDHLISLGVSSQR 131
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
M SYGKE P + + +NRRA++ +
Sbjct: 132 MNTISYGKERPVAVCDNISCWNQNRRAVLVV 162
>gi|229592015|ref|YP_002874134.1| putative outer membrane porin A protein [Pseudomonas fluorescens
SBW25]
gi|229363881|emb|CAY51363.1| putative outer membrane porin A protein [Pseudomonas fluorescens
SBW25]
Length = 326
Score = 88.3 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 1/112 (0%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALG 102
V V FD ++P + NL ++ + + + GH D +G + L
Sbjct: 211 QVVRVELDVKFDFDKSVVKPNSYGDVKNLADFMAQYPATNVEVAGHTDSVGPDAYNQKLS 270
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RRA AV V G++ SR+ YG+ P E A NRR ++
Sbjct: 271 QRRADAVKQVLVKDGVAPSRITAVGYGESRPVADNATEAGRAVNRRVEASVE 322
>gi|107102449|ref|ZP_01366367.1| hypothetical protein PaerPA_01003511 [Pseudomonas aeruginosa PACS2]
Length = 269
Score = 88.3 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 61/140 (43%), Gaps = 2/140 (1%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ ++S L+ + ++GD V FD + ++PA + L +L+ +
Sbjct: 125 SVQEQGQRLSEEIASLSTEETERGLVLTLGD-VLFDFNRAELKPAANRTALKLVQFLQLN 183
Query: 80 DCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ IEG+ D +G R +++ L RA AV + G+ +RM+V YG+ P
Sbjct: 184 PRRVIRIEGYTDSVGDRQANLDLSRERAQAVADVLADLGVDPARMQVVGYGEAFPVTDNA 243
Query: 139 DEDAYAKNRRAIVFLKGCRA 158
A+NRR + +
Sbjct: 244 SNRGRAQNRRVEIVFSNDKG 263
>gi|302381938|ref|YP_003817761.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
gi|302192566|gb|ADL00138.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
Length = 356
Score = 88.3 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 38/146 (26%), Positives = 56/146 (38%), Gaps = 3/146 (2%)
Query: 14 TMMSISGIDNLDTKISSP-DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL 72
++ +G+ + L ++ V FD +IRP L L
Sbjct: 190 SLAGGAGVATSSLATVQALKSDLGAIETDRGTVVALSGDVTFDFDQATIRPDARPTLDRL 249
Query: 73 GSWLEKH--DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
++ IEGH D G+ + L RRA AV Y V RG S R++ G+
Sbjct: 250 AELIQATGGTGRIAIEGHTDSEGTDAYNHDLSERRAEAVKAYLVPRGTSGDRLEAMGIGE 309
Query: 131 EMPSVYGHDEDAYAKNRRAIVFLKGC 156
P+V D+ +NRR V L G
Sbjct: 310 ARPAVANDDDAGRRRNRRVEVILPGS 335
>gi|107023374|ref|YP_621701.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
gi|116690456|ref|YP_836079.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
HI2424]
gi|170733777|ref|YP_001765724.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
MC0-3]
gi|254247501|ref|ZP_04940822.1| Outer membrane porin F [Burkholderia cenocepacia PC184]
gi|105893563|gb|ABF76728.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
gi|116648545|gb|ABK09186.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424]
gi|124872277|gb|EAY63993.1| Outer membrane porin F [Burkholderia cenocepacia PC184]
gi|169817019|gb|ACA91602.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3]
Length = 215
Score = 88.3 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 56/136 (41%), Gaps = 1/136 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
I N ++ +V SV F T+ Y+I PA +L++L + +
Sbjct: 74 AIKNKLAPSAAQTGTQVTEQPDGSLKLNVPSSVTFATNQYAITPAFTPLLNDLATTLNQN 133
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
I G+ D GS+ + L RA +V N V RG++ R+ G P
Sbjct: 134 PQVTASIVGYTDSTGSQQLNQTLSQNRAQSVVNALVQRGVNGGRLSAQGMGPSNPIADNA 193
Query: 139 DEDAYAKNRRAIVFLK 154
E A+NRR ++L+
Sbjct: 194 TEAGRAQNRRVEIYLR 209
>gi|325520557|gb|EGC99637.1| OmpA/MotB family outer membrane protein [Burkholderia sp. TJI49]
Length = 163
Score = 88.3 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 9/163 (5%)
Query: 1 MQYSTIFIILSAITMMSIS--GIDNLDTKISSPDT------VLNESSLQEQFSSSVGDSV 52
M + + +++A+ ++ + +P + L S SV
Sbjct: 1 MSKTNRYAVIAALALLGGCHHAAKTPENAGMAPAPSSETVATVTADDLNNPNSPLAKRSV 60
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFN 111
+FD SYS++P +L +L H LI+G+ DE G+ ++ALG RR+ AV +
Sbjct: 61 YFDFDSYSVKPDYQSLLQAHADYLRSHPARHVLIQGNTDERGTSEYNLALGERRSQAVMS 120
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G+ AS+++ S GKE P GHDED++A+NRRA + +
Sbjct: 121 ALETLGVPASQLEAVSLGKEKPVALGHDEDSWAQNRRADLVYR 163
>gi|113868486|ref|YP_726975.1| outer membrane protein and related peptidoglycan-associated
proteins [Ralstonia eutropha H16]
gi|113527262|emb|CAJ93607.1| outer membrane protein and related peptidoglycan-associated
proteins [Ralstonia eutropha H16]
Length = 177
Score = 88.3 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 56/157 (35%), Gaps = 7/157 (4%)
Query: 5 TIFIILSAITMMSISGIDNLDTKISSPDTVLNE------SSLQEQFSSSVGDSVFFDTSS 58
+++ + +S++G + + E + + D + F +
Sbjct: 19 KLWLAAVVLAGLSLAGCQTAPPATGLSPAQVAVLKQEGFALTDEGWELGLSDKLLFGFNE 78
Query: 59 YSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG 117
I + LG L+ ++GH D+ GS + +L +RRA AV G
Sbjct: 79 DLIDAERAANVQRLGRALKGAGIERLRVDGHTDDAGSAEYNQSLSVRRAEAVARLLAGAG 138
Query: 118 ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ ++V GK P ++NRR + +
Sbjct: 139 FAPENIEVRGRGKSRPVADNRTAAGRSENRRVAIVVS 175
>gi|19704600|ref|NP_604162.1| Outer membrane protein [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|19714896|gb|AAL95461.1| Outer membrane protein [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
Length = 202
Score = 88.3 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 46/124 (37%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHA 89
T ++ V F + S +I L+ + + + G+
Sbjct: 75 QGTQAQVRKDGNALVINLPGGVTFASDSANITSGFYSALNGIAQSLNNYPETRIQVNGYT 134
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G + L RRA AV Y +A+G+S++R+ +G P + +NRR
Sbjct: 135 DNTGKDAHNQELSQRRANAVAQYLIAQGVSSNRIVANGFGSSNPIASNSTPEGRLQNRRV 194
Query: 150 IVFL 153
+ +
Sbjct: 195 EIKI 198
>gi|15596974|ref|NP_250468.1| Major porin and structural outer membrane porin OprF precursor
[Pseudomonas aeruginosa PAO1]
gi|116049726|ref|YP_791468.1| major porin and structural outer membrane porin OprF precursor
[Pseudomonas aeruginosa UCBPP-PA14]
gi|152985208|ref|YP_001348883.1| outer membrane protein OprF precursor [Pseudomonas aeruginosa PA7]
gi|218892271|ref|YP_002441138.1| Major porin and structural outer membrane porin OprF precursor
[Pseudomonas aeruginosa LESB58]
gi|254234871|ref|ZP_04928194.1| Major porin and structural outer membrane porin OprF precursor
[Pseudomonas aeruginosa C3719]
gi|254240119|ref|ZP_04933441.1| Major porin and structural outer membrane porin OprF precursor
[Pseudomonas aeruginosa 2192]
gi|296389835|ref|ZP_06879310.1| Major porin and structural outer membrane porin OprF precursor
[Pseudomonas aeruginosa PAb1]
gi|313110468|ref|ZP_07796353.1| Major porin and structural outer membrane porin OprF precursor
[Pseudomonas aeruginosa 39016]
gi|130680|sp|P13794|PORF_PSEAE RecName: Full=Outer membrane porin F; Flags: Precursor
gi|9947757|gb|AAG05166.1|AE004603_6 Major porin and structural outer membrane porin OprF precursor
[Pseudomonas aeruginosa PAO1]
gi|151508|gb|AAA25973.1| porin protein F precursor [Pseudomonas aeruginosa]
gi|4186419|gb|AAD11568.1| major outer membrane protein OprF precursor [Pseudomonas aeruginosa
PAO1]
gi|115584947|gb|ABJ10962.1| major porin and structural outer membrane porin OprF precursor
[Pseudomonas aeruginosa UCBPP-PA14]
gi|126166802|gb|EAZ52313.1| Major porin and structural outer membrane porin OprF precursor
[Pseudomonas aeruginosa C3719]
gi|126193497|gb|EAZ57560.1| Major porin and structural outer membrane porin OprF precursor
[Pseudomonas aeruginosa 2192]
gi|150960366|gb|ABR82391.1| outer membrane protein OprF precursor [Pseudomonas aeruginosa PA7]
gi|218772497|emb|CAW28279.1| Major porin and structural outer membrane porin OprF precursor
[Pseudomonas aeruginosa LESB58]
gi|310882855|gb|EFQ41449.1| Major porin and structural outer membrane porin OprF precursor
[Pseudomonas aeruginosa 39016]
Length = 350
Score = 88.3 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 55/138 (39%), Gaps = 4/138 (2%)
Query: 21 IDNLDTKISSPDTVLNES--SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ V V FD ++ + NL ++++
Sbjct: 209 CDNVDKCPDTPANVTVDANGCPAVAEVVRVQLDVKFDFDKSKVKENSYADIKNLADFMKQ 268
Query: 79 HDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVY 136
+ +EGH D +G+ + L RRA AV + V G+ R+ YG+ P
Sbjct: 269 YPSTSTTVEGHTDSVGTDAYNQKLSERRANAVRDVLVNEYGVEGGRVNAVGYGESRPVAD 328
Query: 137 GHDEDAYAKNRRAIVFLK 154
+ A NRR ++
Sbjct: 329 NATAEGRAINRRVEAEVE 346
>gi|319404756|emb|CBI78357.1| Outer membrane lipoprotein omp16 [Bartonella rochalimae ATCC
BAA-1498]
Length = 168
Score = 88.3 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 50/151 (33%), Positives = 80/151 (52%), Gaps = 3/151 (1%)
Query: 6 IFIILSAITMMSISGIDNLDTKISSPDTVLN--ESSLQEQFSSSVGDSVFFDTSSYSIRP 63
+ ++L + + G ++D S + N ++ L + F+ +VGD VFF S SI
Sbjct: 12 LAVVLCLLLTLIGCGKKSIDATNSLGQSGYNNAQAGLSQDFTVNVGDRVFFSLDSSSIES 71
Query: 64 ADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASR 122
+L+ WL IEGHADE G+R ++ALG RRA AV ++ ++ G+S+ R
Sbjct: 72 DAEYILARQAEWLLRYPHYSITIEGHADERGTREYNLALGQRRAVAVRDHLISLGVSSQR 131
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
M SYGKE P + + +NRRA++ +
Sbjct: 132 MNTISYGKERPVAVCDNISCWNQNRRAVLVI 162
>gi|154252570|ref|YP_001413394.1| peptidoglycan-associated lipoprotein [Parvibaculum lavamentivorans
DS-1]
gi|154156520|gb|ABS63737.1| Peptidoglycan-associated lipoprotein [Parvibaculum lavamentivorans
DS-1]
Length = 166
Score = 88.3 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 5/149 (3%)
Query: 6 IFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPAD 65
F++L+A + S D+ + SS + QE ++VGD VFFDT S+
Sbjct: 16 AFLMLAACS----STDDSANANPSSSSSGQITPGSQEDLVANVGDRVFFDTDQSSLSDEA 71
Query: 66 IQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
L +W++ + F +EGHADE G+R ++ALG RRA + +Y V+ G+ R+
Sbjct: 72 RATLQRQAAWMQLYPNLTFTVEGHADERGTREYNLALGGRRANSAKDYLVSLGVDGGRLN 131
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
SYGKE P +E+ +A+NRRA+ +
Sbjct: 132 TVSYGKERPVCLDSNENCWAQNRRAVTVV 160
>gi|226944423|ref|YP_002799496.1| major outer membrane porin OprF [Azotobacter vinelandii DJ]
gi|226719350|gb|ACO78521.1| major outer membrane porin OprF [Azotobacter vinelandii DJ]
Length = 351
Score = 88.3 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 4/138 (2%)
Query: 21 IDNLDTKISSPDTVL--NESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P E V V FD ++ + NL ++++
Sbjct: 210 CDNVDRCPDTPANTTVNAEGCTAVAEVVRVELDVKFDFDKAQVKEESYADIKNLADFMKQ 269
Query: 79 H-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVY 136
+ + +EGH D +G+ + L RRA AV + V G+ SR+ YG+ P
Sbjct: 270 YPQTNTTVEGHTDSVGTDAYNQKLSERRANAVRDVLVNEYGVQGSRVDSVGYGESRPVAD 329
Query: 137 GHDEDAYAKNRRAIVFLK 154
E A NRR ++
Sbjct: 330 NATESGRAINRRVEAEVE 347
>gi|92118969|ref|YP_578698.1| OmpA/MotB [Nitrobacter hamburgensis X14]
gi|91801863|gb|ABE64238.1| OmpA/MotB [Nitrobacter hamburgensis X14]
Length = 164
Score = 88.3 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 51/150 (34%), Positives = 77/150 (51%), Gaps = 2/150 (1%)
Query: 5 TIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPA 64
+ +L+ M + + Q+ F +VGD VFF++ ++ P
Sbjct: 12 KLAAVLAVALSMGACA-NKNPLDGAGGMANAATPGSQQDFVVNVGDRVFFESDQTNLSPQ 70
Query: 65 DIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
I L WL+ ++ F IEGHADE G+R +IALG RRA V ++ +RGI+ SRM
Sbjct: 71 AITTLEKQARWLQTYNRYSFTIEGHADERGTREYNIALGARRAQTVRSFLASRGINPSRM 130
Query: 124 KVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ SYGKE P +D +++NRRA+ L
Sbjct: 131 RTISYGKERPVAVCNDISCWSQNRRAVTVL 160
>gi|14331084|emb|CAC40971.1| hypothetical protein [Vibrio pommerensis]
Length = 378
Score = 88.3 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 4/129 (3%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFL 84
++ P+ + E+ Q SS F+T S S+ P+ + L L + +
Sbjct: 237 ETVAEPEPQVIETYT--QVVSSAFGEALFETGSTSLSPSLMLQLQPLLARLKQYPETVVE 294
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAY 143
I GH D GS + L +RA +V NY +++G+ R+ V YG+ +P E
Sbjct: 295 ISGHTDSKGSDTLNQRLSEQRAQSVANYLISKGVDPERITRVVGYGESLPVASNDTESGR 354
Query: 144 AKNRRAIVF 152
A+NRR +
Sbjct: 355 AQNRRVEIV 363
>gi|293611455|ref|ZP_06693750.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292826239|gb|EFF84609.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325123511|gb|ADY83034.1| OmpA/MotB [Acinetobacter calcoaceticus PHEA-2]
Length = 159
Score = 88.3 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 62/157 (39%), Gaps = 4/157 (2%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESS---LQEQFSSSVGDSVFFDTS 57
M ++ + A+ ++++G + +L + E ++ + + + FD +
Sbjct: 1 MNTRSLKLSFIALLCITLAGCLSFGPLKYRQVKLLKKEGFVLTDEGWTLGLPERLLFDFN 60
Query: 58 SYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
+ ++ + L L + + I GH D++G + L RA +V N F+ R
Sbjct: 61 NAQLKQSHEAELVRLANQLNKYDLNKLKIVGHTDDVGDATYNQKLSEERAQSVANLFLTR 120
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G + V G P V + A NRR + +
Sbjct: 121 GFKKENIYVIGRGSTQPYVPNTTNENRAINRRVAIVV 157
>gi|262068085|ref|ZP_06027697.1| outer membrane porin F [Fusobacterium periodonticum ATCC 33693]
gi|291378171|gb|EFE85689.1| outer membrane porin F [Fusobacterium periodonticum ATCC 33693]
Length = 183
Score = 88.3 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 70/181 (38%), Gaps = 27/181 (14%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQE------------------ 42
M+ +++ A+ + SG + N+ ++++
Sbjct: 1 MKKRIFAVLILALLATACSGSKKVIKNTGVGVDSANKYAIEDTEASKKPLEDIIVFNQEG 60
Query: 43 --------QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELG 93
S+ + + FD Y+++ L+ L E D I+G+ D +G
Sbjct: 61 VTIRREGNNLILSMPELILFDFDKYAVKEGIKPSLATLAKALGENKDIHIKIDGYTDFIG 120
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ ++ L ++RA A+ ++ +++G S + + YG++ P+ ++NRR +
Sbjct: 121 TEAYNLDLSVKRARAIKDFLISKGAIGSNISIEGYGEQNPADTNQTAAGRSRNRRVEFII 180
Query: 154 K 154
Sbjct: 181 S 181
>gi|187923017|ref|YP_001894659.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
gi|187714211|gb|ACD15435.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
Length = 217
Score = 88.3 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 56/132 (42%), Gaps = 1/132 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF-L 84
+ + ++ SV FDT+SY+++P+ VL L ++++
Sbjct: 80 SGATKGTGTQITEQPDGSLKLNIPSSVTFDTNSYAVKPSFAPVLDQLAQTMQQNPELVAQ 139
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+ GH D G + L + RA +V Y RG++ R+ G+ P + E A
Sbjct: 140 VVGHTDSTGQPAYNQTLSVNRAESVTGYLGQRGVAPQRLSAQGLGQTQPIADNNTEAGRA 199
Query: 145 KNRRAIVFLKGC 156
NRR ++L+
Sbjct: 200 ANRRVEIYLRAT 211
>gi|167038133|ref|YP_001665711.1| OmpA/MotB domain-containing protein [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|167039156|ref|YP_001662141.1| OmpA/MotB domain-containing protein [Thermoanaerobacter sp. X514]
gi|256750878|ref|ZP_05491762.1| OmpA/MotB domain protein [Thermoanaerobacter ethanolicus CCSD1]
gi|300913254|ref|ZP_07130571.1| OmpA/MotB domain protein [Thermoanaerobacter sp. X561]
gi|307723732|ref|YP_003903483.1| OmpA/MotB domain-containing protein [Thermoanaerobacter sp. X513]
gi|320116543|ref|YP_004186702.1| OmpA/MotB domain-containing protein [Thermoanaerobacter brockii
subsp. finnii Ako-1]
gi|166853396|gb|ABY91805.1| OmpA/MotB domain protein [Thermoanaerobacter sp. X514]
gi|166856967|gb|ABY95375.1| OmpA/MotB domain protein [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|256750213|gb|EEU63233.1| OmpA/MotB domain protein [Thermoanaerobacter ethanolicus CCSD1]
gi|300889939|gb|EFK85084.1| OmpA/MotB domain protein [Thermoanaerobacter sp. X561]
gi|307580793|gb|ADN54192.1| OmpA/MotB domain protein [Thermoanaerobacter sp. X513]
gi|319929634|gb|ADV80319.1| OmpA/MotB domain protein [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 238
Score = 88.3 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 54/133 (40%), Gaps = 5/133 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ + S+ DS+ FD S +RP + +VL +G L+ +EG D+
Sbjct: 99 QGAVTSYIDERGLVISLQDSLLFDLGSADVRPEEKEVLIKIGDMLKSLPNHIRVEGFTDD 158
Query: 92 LGSRNS----SIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
L N+ + L + RA V V I +R+ YG+ P V + E+ N
Sbjct: 159 LPIHNNKFDSNWELSVIRATNVVKILVNEVGIEPARISAVGYGEYRPVVPNNSEENRRLN 218
Query: 147 RRAIVFLKGCRAN 159
RR + + N
Sbjct: 219 RRVDIVIMNTEYN 231
>gi|227873496|ref|ZP_03991745.1| OmpA family membrane protein [Oribacterium sinus F0268]
gi|227840670|gb|EEJ51051.1| OmpA family membrane protein [Oribacterium sinus F0268]
Length = 414
Score = 88.3 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 53/111 (47%), Gaps = 2/111 (1%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALG 102
++ V FD Y IRP ++L++L + L++ F I+GH D + + + L
Sbjct: 302 LLITLDSGVLFDVDKYDIRPDAEKILNDLATVLKEGGITAFQIDGHTDSMDTDEHNQVLS 361
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA +V +Y ++G++A + YG+ P + +NRR + +
Sbjct: 362 ENRANSVKSYLASQGVTAE-ITTHGYGESRPVATNDTAEGRQQNRRVEIIV 411
>gi|56477938|ref|YP_159527.1| outer membrane lipoprotein [Aromatoleum aromaticum EbN1]
gi|56313981|emb|CAI08626.1| outer membrane lipoprotein containing OmpA/MotB domain [Aromatoleum
aromaticum EbN1]
Length = 189
Score = 88.3 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 61/186 (32%), Gaps = 32/186 (17%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDT----VLNESSLQEQFSSSVGDSVFFDT 56
M ++F+++ T++S + + + V + + + V +
Sbjct: 1 MNRFSLFVLVGVSTLLSACATTTVTSPPGTATPIHRTVPVAKNTAFDWPAERNRIVKRLS 60
Query: 57 SSYSI-----RPADIQVLSNLGSWLEK-----------------------HDCDFLIEGH 88
S I +Q+L + + + + GH
Sbjct: 61 GSSEIATRVLDNGTLQLLLPGAEAFSRGGTEPQPVLTPNLDRVASALASSPEVEIRVFGH 120
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D L S ++ L ++RA V + RGI R+ G+ P E AKNRR
Sbjct: 121 TDSLDSELHNLQLSIQRAETVAEHLRRRGIPLVRLHADGKGEAEPIADNATEAGRAKNRR 180
Query: 149 AIVFLK 154
+ L+
Sbjct: 181 VEIVLR 186
>gi|85858041|ref|YP_460243.1| outer membrane OmpA family protein [Syntrophus aciditrophicus SB]
gi|85721132|gb|ABC76075.1| outer membrane OmpA family protein [Syntrophus aciditrophicus SB]
Length = 223
Score = 88.3 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 35/127 (27%), Positives = 58/127 (45%), Gaps = 1/127 (0%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIE 86
+ + S + + V FDT+S +RP ++ + + ++ +E
Sbjct: 88 VLATSDAAAVSREGNLLAVTFKGDVTFDTNSAEVRPGLYSEINRVAGVMTQYPETLIRVE 147
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
GH D +GS ++ L RRA AV V RG++ SR++V YG+ MP E KN
Sbjct: 148 GHTDSVGSDAYNMDLSTRRANAVKTLLVQRGVADSRIEVVGYGETMPIATNDTEAGRQKN 207
Query: 147 RRAIVFL 153
RR + +
Sbjct: 208 RRVEIKI 214
>gi|37525408|ref|NP_928752.1| peptidoglycan-associated outer membrane lipoprotein [Photorhabdus
luminescens subsp. laumondii TTO1]
gi|36784836|emb|CAE13749.1| peptidoglycan-associated lipoprotein precursor [Photorhabdus
luminescens subsp. laumondii TTO1]
Length = 166
Score = 88.3 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 55/164 (33%), Positives = 82/164 (50%), Gaps = 13/164 (7%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDTV--------LNESSLQEQFSSSV 48
MQ + + + L + + + S N D + TV E + Q+
Sbjct: 1 MQLNKVLKGLMLALPVMAVAACSSNKNADNDQTGVGTVNETNAGLSAEELARQQMQELQN 60
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAY 107
+ V+F Y I Q+L ++L + ++EGHADE G+ +IALG RRA
Sbjct: 61 NNIVYFGFDKYDINSDFTQLLDAHAAFLRSNPSYKVVVEGHADERGTPEYNIALGERRAN 120
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
AV Y +G+S ++ + SYGKE P+V GHDE AYAKNRRA++
Sbjct: 121 AVKMYLQGKGVSGEQISIVSYGKEKPAVLGHDEAAYAKNRRAVL 164
>gi|110638407|ref|YP_678616.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
gi|110281088|gb|ABG59274.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
Length = 509
Score = 88.3 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYA 108
+++FFD S S+ L + ++ + I H D++GS + L RA +
Sbjct: 402 NNLFFDFDSASLTKESELELDRVIEMMKTNATMQVEISAHTDDMGSDAYNQKLSQLRAES 461
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V Y GI +R+ YG+ +PSV E+ AKNRR +
Sbjct: 462 VVKYLTLHGIITTRLVAKGYGESVPSVPNDTEENRAKNRRVEFKI 506
>gi|209965094|ref|YP_002298009.1| outer membrane lipoprotein omp16 [Rhodospirillum centenum SW]
gi|209958560|gb|ACI99196.1| outer membrane lipoprotein omp16 [Rhodospirillum centenum SW]
Length = 163
Score = 88.3 bits (217), Expect = 3e-16, Method: Composition-based stats.
Identities = 51/163 (31%), Positives = 79/163 (48%), Gaps = 11/163 (6%)
Query: 1 MQYSTIFIILSAITMMSISGID---------NLDTKISSPDTVLNESSLQEQFSSSVGDS 51
M++ + +A+ ++S T + E F ++VGD
Sbjct: 1 MRFK-FLSLFAALMLVSACQSAPETTATTTTGGTTTAAPATPTGPVPGSAEDFVANVGDR 59
Query: 52 VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
VFF + + P L +W + + +EGHADE G+R ++ALG RRA AV
Sbjct: 60 VFFGFDRFDLTPEATATLDRQAAWLKQYPNVTVTVEGHADERGTREYNLALGERRATAVK 119
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
NY A G+ +R++ SYGKE P+V G DE A+A+NRR + +
Sbjct: 120 NYLTALGVDTARVQTISYGKERPAVLGSDESAWAQNRRGVTVI 162
>gi|83952523|ref|ZP_00961254.1| OmpA domain protein [Roseovarius nubinhibens ISM]
gi|83836196|gb|EAP75494.1| OmpA domain protein [Roseovarius nubinhibens ISM]
Length = 203
Score = 87.9 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHAD 90
+ + ++ ++ ++ + F S ++ L + L+ + + GH D
Sbjct: 77 NDSVTVNNTGDRLIVTMPQDILFAIDSSTVNSGLRGDLLTVARSLQSYPDTTVQVVGHTD 136
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + AL RRA AV + + G++ SR++ G++ P + A+NRR
Sbjct: 137 NTGSAAHNQALSERRANAVADVLMNGGVAFSRIQTYGRGEDQPLASNLTAEGRAQNRRVE 196
Query: 151 VFL 153
+ +
Sbjct: 197 IVI 199
>gi|190575561|ref|YP_001973406.1| putative peptidoglycan-associated lipoprotein [Stenotrophomonas
maltophilia K279a]
gi|254523725|ref|ZP_05135780.1| PAL family outer membrane lipoprotein [Stenotrophomonas sp. SKA14]
gi|190013483|emb|CAQ47118.1| putative peptidoglycan-associated lipoprotein [Stenotrophomonas
maltophilia K279a]
gi|219721316|gb|EED39841.1| PAL family outer membrane lipoprotein [Stenotrophomonas sp. SKA14]
Length = 172
Score = 87.9 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 39/168 (23%), Positives = 71/168 (42%), Gaps = 16/168 (9%)
Query: 1 MQYSTIFIILSAITMMSISGIDNL-DTKISSPDTVLN--------------ESSLQEQFS 45
M ST +++S +++ ++G + ++P + +
Sbjct: 1 MNKSTRVLLVSLLSVAVLAGCSKKVKEEPAAPVDTGTSTTTPTGPSTSGLYGPGDLDTDA 60
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLR 104
V+FD ++P +++ +L ++GH DE GSR + ALG R
Sbjct: 61 CLRQRVVYFDLDKEDVKPEFQAIMACHAKYLRDRPSSRITLQGHTDERGSRAYNQALGER 120
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
R V + A G SAS++ V SYG+E P +E +++NRR +
Sbjct: 121 RGNGVNSALQANGGSASQLTVVSYGEERPVCTESNESCWSQNRRVEIV 168
>gi|163858421|ref|YP_001632719.1| hypothetical protein Bpet4103 [Bordetella petrii DSM 12804]
gi|163262149|emb|CAP44451.1| OmpA-family protein [Bordetella petrii]
Length = 427
Score = 87.9 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 48/127 (37%), Gaps = 4/127 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
D ++ ++ + F++ S +R + VLS + L + + L+ G+ D
Sbjct: 286 DDLVTVRDEVDRSVVVLRGDGLFESGSAEVREQYLPVLSRVADALRETQGNILVRGYTDN 345
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+ S+ L RA AV AR + R++ G P ++NR
Sbjct: 346 IPMRGARYPSNWHLSQARADAVKELLEARLDNPQRVRAEGRGDADPVAPNDTAAGRSRNR 405
Query: 148 RAIVFLK 154
R + L
Sbjct: 406 RVEITLM 412
>gi|74318472|ref|YP_316212.1| outer membrane protein [Thiobacillus denitrificans ATCC 25259]
gi|74057967|gb|AAZ98407.1| outer membrane protein [Thiobacillus denitrificans ATCC 25259]
Length = 402
Score = 87.9 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 45/104 (43%), Gaps = 1/104 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYA 108
D V F+ S + P I +L N + L + + GH D S ++ L RRA A
Sbjct: 297 DGVSFEPGSVRLTPDSITILDNAAASLNAWGEVRVEVAGHTDSTHSAAFNLELSQRRAEA 356
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
V Y V +G+ A R+ YG+ P A+NRR +
Sbjct: 357 VRAYLVKKGVRAERLTARGYGESQPVADNRTAAGRAQNRRVELV 400
>gi|262198644|ref|YP_003269853.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
gi|262081991|gb|ACY17960.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
Length = 637
Score = 87.9 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 2/115 (1%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLG--SWLEKHDCDFLIEGHADELGSRNSSIA 100
S + D V+F+ +S +I+ +L + ++GH D GS + ++
Sbjct: 519 DVSIDILDKVYFEFNSANIKRESFPILDAVAATIMGNPDIRLIEVQGHTDARGSASYNLR 578
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
L RA +V Y + +G+ R+ YG+ P + E A+A NRR +
Sbjct: 579 LSDERAKSVRAYLLKKGVEPDRVDAKGYGETKPIDSSNTEKAHATNRRVEFLIMN 633
>gi|163759606|ref|ZP_02166691.1| OmpA/MotB [Hoeflea phototrophica DFL-43]
gi|162283203|gb|EDQ33489.1| OmpA/MotB [Hoeflea phototrophica DFL-43]
Length = 215
Score = 87.9 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHA 89
T ++ + + ++ ++ ++ FD+ +++P + L+++ L+K + + GH
Sbjct: 88 QGTGVSVTRVGDKIILNMPSNITFDSDQSAVKPQFYETLNSVALVLQKFNRSLVDVAGHT 147
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GS + ++ L +RA +V +Y +++G A R +G+ P + A NRR
Sbjct: 148 DSTGSDSYNLTLSQQRAQSVSSYLISQGNDARRFYTQGFGESRPIADNGTDAGRAANRRV 207
Query: 150 IVFLK 154
+ +
Sbjct: 208 EIQIS 212
>gi|77460334|ref|YP_349841.1| OmpA/MotB [Pseudomonas fluorescens Pf0-1]
gi|77384337|gb|ABA75850.1| putative outer membrane protein [Pseudomonas fluorescens Pf0-1]
Length = 270
Score = 87.9 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 56/140 (40%), Gaps = 2/140 (1%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ + L + ++GD V FDT ++ + +V+ + +L+ +
Sbjct: 126 SVQQQGKWLEEQIVALATTQTDRGLVMTLGD-VLFDTGEAELKNSANRVVLKIVQFLQLN 184
Query: 80 DCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
IEG+ D G + ++ L RA +V + GI R++V YG E P
Sbjct: 185 PKRIVRIEGYTDSTGGKQENLKLSRDRAQSVADVLTDLGIDEKRIQVEGYGDEYPVDANA 244
Query: 139 DEDAYAKNRRAIVFLKGCRA 158
E A+NRR + +
Sbjct: 245 SERGRAQNRRVEIVFSDEKG 264
>gi|256028784|ref|ZP_05442618.1| Outer membrane protein [Fusobacterium sp. D11]
Length = 191
Score = 87.9 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 70/160 (43%), Gaps = 8/160 (5%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKIS------SPDTVLNESSLQEQFSSSVGDSVFF 54
M + +F L A+ + +++ + I +LN + +E S+ F
Sbjct: 14 MLFLLVF-SLPALAVQALTTTQMRENSIRINALELKDIDILNSEAPKEMTIVLDERSLNF 72
Query: 55 DTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
D ++ +L N+ ++E+++ + I GH D +GS + L RRA AV +
Sbjct: 73 DFDKSIVKAQYFDLLKNIKEFVEQNNYEITIVGHTDSIGSNQYNFGLSRRRAEAVKAKLL 132
Query: 115 ARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G++ R+ + + G+E P ++ A+NRR L
Sbjct: 133 EFGLAEDRIVGIEAMGEEQPIATNATKEGRAQNRRVEFKL 172
>gi|194366890|ref|YP_002029500.1| peptidoglycan-associated lipoprotein [Stenotrophomonas maltophilia
R551-3]
gi|194349694|gb|ACF52817.1| peptidoglycan-associated lipoprotein [Stenotrophomonas maltophilia
R551-3]
Length = 172
Score = 87.9 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 39/168 (23%), Positives = 70/168 (41%), Gaps = 16/168 (9%)
Query: 1 MQYSTIFIILSAITMMSISGIDNL-DTKISSPDTVLN--------------ESSLQEQFS 45
M ST +++S +++ ++G + +P + +
Sbjct: 1 MNKSTRVLLVSLLSVAVLAGCSKKVKEEPQAPVDTGTSTTTPTGPSTSGLYGPGDLDTDA 60
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLR 104
V+FD ++P +++ +L ++GH DE GSR + ALG R
Sbjct: 61 CLRQRVVYFDLDKEDVKPEFQAIMACHAKYLRDRPSSRITLQGHTDERGSRAYNQALGER 120
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
R V + A G SAS++ V SYG+E P +E +++NRR +
Sbjct: 121 RGNGVNSALQANGGSASQLTVVSYGEERPVCTESNESCWSQNRRVEIV 168
>gi|146306455|ref|YP_001186920.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp]
gi|145574656|gb|ABP84188.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp]
Length = 244
Score = 87.9 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 52/130 (40%), Gaps = 1/130 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFL 84
+ + + E S +V F S + ++L+++
Sbjct: 114 PASAPVAPAMEPVAQDEVIVLSDLGNVLFAFDSAELTAEARRLLTDVSARLTGASLVSVK 173
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+ GH D +GS + L RRA +V ++ VA+G+ A ++ G+ P + A
Sbjct: 174 VVGHTDSVGSDAYNQGLSERRARSVADFLVAQGVPAGKLSTEGRGESQPVADNGSDAGRA 233
Query: 145 KNRRAIVFLK 154
+NRR +++
Sbjct: 234 QNRRVELYVS 243
>gi|187923217|ref|YP_001894859.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
gi|187714411|gb|ACD15635.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
Length = 168
Score = 87.9 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 33/153 (21%), Positives = 63/153 (41%), Gaps = 1/153 (0%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNE-SSLQEQFSSSVGDSVFFDTSSYSIRPADIQ 67
+S + + + N DT+ S V E + + + + ++ FD + +R
Sbjct: 11 AISILLVTGCAAQLNRDTETSLNKAVGIEVAPVAGGVAVKLPETALFDFNKSEVRSDAAA 70
Query: 68 VLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
V+ L++ ++EG+ D +G+ + L RA A VARGI+ R++
Sbjct: 71 VIDRSAVLLKRSKKPIVVEGYTDNVGTLEYNQHLSEARASAAGYALVARGIAMDRIRTKG 130
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
P + A NRR + ++G +T
Sbjct: 131 NAYNNPVASNDTPEGRALNRRTEIVVRGETMDT 163
>gi|254303029|ref|ZP_04970387.1| OmpA family membrane protein [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148323221|gb|EDK88471.1| OmpA family membrane protein [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 386
Score = 87.9 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALG 102
++ + FD Y +RP + L++L + L++ D F I+GH D S + AL
Sbjct: 274 LLITLDSGILFDVDKYDVRPEAERALASLATVLKEADVKAFEIDGHTDSDASDEYNQALS 333
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+RA AV ++ ++G+++ + + YG+ P + KNRR + +
Sbjct: 334 EKRANAVKDFLASQGLTSE-ITIIGYGESRPVASNDTPEGKQKNRRVEIII 383
>gi|150016469|ref|YP_001308723.1| OmpA/MotB domain-containing protein [Clostridium beijerinckii NCIMB
8052]
gi|149902934|gb|ABR33767.1| OmpA/MotB domain protein [Clostridium beijerinckii NCIMB 8052]
Length = 251
Score = 87.9 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 54/132 (40%), Gaps = 5/132 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE- 91
+ S + S DSVFF++ +I+P L ++ L D +EGH D
Sbjct: 113 GSVTTSIQERGLIISFNDSVFFNSGQSTIKPDWQGKLISISKILNDIDNYIHVEGHTDNV 172
Query: 92 ---LGSRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+S+ L RA V + +++ + R+ YG+ P + ED A NR
Sbjct: 173 AINNDYFHSNWQLSAVRAANVVEFLISKGNVKPERLSSVGYGEYRPVKDNNTEDGRAANR 232
Query: 148 RAIVFLKGCRAN 159
R + + + N
Sbjct: 233 RVDIVILNTKFN 244
>gi|313674928|ref|YP_004052924.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
gi|312941626|gb|ADR20816.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
Length = 679
Score = 87.9 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 1/107 (0%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
+ D+++F+ +++ A L L + I GH D GS + ++ L RA
Sbjct: 570 IIDNIYFNFDKTTLKEASFPELDRLTDLMSQNPGIKIEIIGHTDSKGSDDYNLILSEGRA 629
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV Y + +GI+ +RM G+ P + ++ A+NRR +
Sbjct: 630 QAVMEYLLEKGIAQNRMTFKGLGETAPISSNNTDEGRAENRRVEFTI 676
>gi|123440951|ref|YP_001004940.1| putative lipoprotein [Yersinia enterocolitica subsp. enterocolitica
8081]
gi|122087912|emb|CAL10700.1| putative lipoprotein [Yersinia enterocolitica subsp. enterocolitica
8081]
Length = 169
Score = 87.9 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 31/158 (19%), Positives = 63/158 (39%), Gaps = 6/158 (3%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESS-----LQEQFSSSVGDSVFFDT 56
Q + ++I A+ ++ + G + +P+ + + + + V FD+
Sbjct: 9 QKNPLWISFFALCLLVLVGCQAKPHQGLTPEQIAALQEQGFKLTDNGWVFGLANKVLFDS 68
Query: 57 SSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA 115
+ + +Q + N+G ++GH D +G + L +RA AV + A
Sbjct: 69 DVRKLNASGVQTVQNIGRALHNVGINHMRVDGHTDAIGEDGYNQQLSFQRASAVADTLAA 128
Query: 116 RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
GI + ++V GK P A+NRR + +
Sbjct: 129 IGIPRTNIEVRGRGKLEPVADNRTAKGRAENRRVAIIV 166
>gi|311697206|gb|ADQ00078.1| secreted protein containing outer membrane protein, OmpA/MotB,
C-terminal domain [marine bacterium HP15]
Length = 366
Score = 87.9 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 59/140 (42%), Gaps = 5/140 (3%)
Query: 22 DNLDTKISSPDTVLNESSL-QEQFSSSVGDSVFFDTS--SYSIRPADIQVLSNLGSWLEK 78
D+LD +P L +S ++ + + ++++ + ++P + L L++
Sbjct: 217 DDLDKCPDTPMGALVDSDGCPKELTKDIKETLYVEFDLDKTEVKPQFYPEIGELAKVLKQ 276
Query: 79 HDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVY 136
+ L+EGH D GS + + L RA AV + R +R+ T G+ P
Sbjct: 277 YPTSTILLEGHTDSTGSASYNQQLSKSRADAVMKVLIDRFSIPSTRISTTGMGESQPIAS 336
Query: 137 GHDEDAYAKNRRAIVFLKGC 156
+ A+NRR + G
Sbjct: 337 NATVEGRAQNRRVEAIVSGE 356
>gi|238794810|ref|ZP_04638412.1| OmpA family protein [Yersinia intermedia ATCC 29909]
gi|238725890|gb|EEQ17442.1| OmpA family protein [Yersinia intermedia ATCC 29909]
Length = 169
Score = 87.9 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 33/154 (21%), Positives = 62/154 (40%), Gaps = 6/154 (3%)
Query: 6 IFIILSAITMMSISGIDNLDTKISSPDTVLNESS-----LQEQFSSSVGDSVFFDTSSYS 60
I+I A++++ ++G +P+ + + + + V FD+
Sbjct: 13 IWISFFAMSLLILAGCQAAKPPGLTPEQIAALQEQGFKLTDNGWEFGLANKVLFDSDVRE 72
Query: 61 IRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
+ P+ +Q + +G L ++GH D +G + L L RA AV + GI
Sbjct: 73 LNPSGVQRVQKIGRALANVGIHHMRVDGHTDSIGEDGYNQQLSLERASAVADALATIGIP 132
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ + V GK P H A+NRR + +
Sbjct: 133 RANIDVRGRGKLEPVADNHTPKGRAENRRVSMIV 166
>gi|319786286|ref|YP_004145761.1| peptidoglycan-associated lipoprotein [Pseudoxanthomonas suwonensis
11-1]
gi|317464798|gb|ADV26530.1| peptidoglycan-associated lipoprotein [Pseudoxanthomonas suwonensis
11-1]
Length = 170
Score = 87.9 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 70/166 (42%), Gaps = 14/166 (8%)
Query: 1 MQYSTIFIILSAITMMSISGIDNL-------------DTKISSPDTVLNESSLQEQFSSS 47
M ST +++S +++ ++G + +
Sbjct: 1 MNSSTRVLLVSLLSVAVLAGCSKKVKEQPAAETPAPTTPTAPVASDGRYGPEDLDTDACL 60
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRA 106
+V+FD +++P ++ +L ++G+ADE GSR + ALG RR
Sbjct: 61 RQRTVYFDFDQDALKPEFQAIVGCHAKYLRDRPSARITLQGNADERGSRAYNQALGERRG 120
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
AV + A G SAS+++V SYG+E P E +A+NRR +
Sbjct: 121 NAVNSALQAAGGSASQLEVVSYGEERPVCTESTESCWAQNRRVEIV 166
>gi|256827978|ref|YP_003156706.1| OmpA/MotB domain-containing protein [Desulfomicrobium baculatum DSM
4028]
gi|256577154|gb|ACU88290.1| OmpA/MotB domain protein [Desulfomicrobium baculatum DSM 4028]
Length = 223
Score = 87.9 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 51/128 (39%), Gaps = 1/128 (0%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLI 85
+ S + + + ++ V F S + P + + ++ ++
Sbjct: 87 QALSQSEEVAVRREGDLLALTLKGDVTFAVDSDVVLPGLYTEIERIAQVLVKYPQTTIVV 146
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
EGH D GS + AL RRA++V V RG++ SR+ YG+ P +
Sbjct: 147 EGHTDSTGSDTYNQALSERRAWSVQRLLVERGVNPSRITAMGYGESRPVATNDTPEGRQM 206
Query: 146 NRRAIVFL 153
NRR + +
Sbjct: 207 NRRVEIRV 214
>gi|641920|gb|AAA85840.1| protein F precursor [Pseudomonas fluorescens]
Length = 317
Score = 87.9 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 47/133 (35%), Gaps = 1/133 (0%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-E 77
+G + E V V FD ++P + NL ++ +
Sbjct: 183 AGAVAPAPTPAPAPEPTPEPEAPVAQVVRVELDVKFDFDKSVVKPNSYGDVKNLADFMAQ 242
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+ + GH D +G + L RRA AV V G++ SR+ YG+ P
Sbjct: 243 YPATNVEVAGHTDSVGPDAYNQKLSQRRADAVKQVLVKDGVAPSRITAVGYGESRPVADN 302
Query: 138 HDEDAYAKNRRAI 150
E A NRR
Sbjct: 303 ATEAGRAVNRRVE 315
>gi|254714557|ref|ZP_05176368.1| peptidoglycan-associated lipoprotein [Brucella ceti M644/93/1]
gi|254717454|ref|ZP_05179265.1| peptidoglycan-associated lipoprotein [Brucella ceti M13/05/1]
gi|261219284|ref|ZP_05933565.1| peptidoglycan-associated lipoprotein [Brucella ceti M13/05/1]
gi|261322345|ref|ZP_05961542.1| peptidoglycan-associated lipoprotein [Brucella ceti M644/93/1]
gi|260924373|gb|EEX90941.1| peptidoglycan-associated lipoprotein [Brucella ceti M13/05/1]
gi|261295035|gb|EEX98531.1| peptidoglycan-associated lipoprotein [Brucella ceti M644/93/1]
Length = 168
Score = 87.9 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 47/155 (30%), Positives = 74/155 (47%), Gaps = 6/155 (3%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDT-----VLNESSLQEQFSSSVGDSVFFDTSSYSIR 62
I ++ ++++G + ++ + F+ +VGD +FFD S IR
Sbjct: 12 IAIALFMSLAVAGCASKKNLPNNAGDLGLGAGAATPGFSQGFTVNVGDRIFFDLDSSLIR 71
Query: 63 PADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS 121
Q LS W IEGHADE G+R ++ALG RRA A ++ +RG+ +
Sbjct: 72 ADAQQTLSKQAQWLQRYPQYSITIEGHADERGTREYNLALGQRRAAATRDFLASRGVPTN 131
Query: 122 RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
RM+ SYG E P + +++NRRA+ L G
Sbjct: 132 RMRTISYGNERPVAVCDADTCWSQNRRAVTVLNGA 166
>gi|46203195|ref|ZP_00208848.1| COG2885: Outer membrane protein and related
peptidoglycan-associated (lipo)proteins
[Magnetospirillum magnetotacticum MS-1]
Length = 170
Score = 87.9 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 50/165 (30%), Positives = 78/165 (47%), Gaps = 7/165 (4%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDT------KISSPDTVLNESSLQEQFSSSVGDSVFFD 55
++ + + L+ + + + + + F +VGD VFF+
Sbjct: 6 RFRGLSLTLALCAALGLGACSKDSDLADASGFGAGGAGGVARPGSAQDFVVNVGDRVFFE 65
Query: 56 TSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
+ S + P L SW FLIEGHADE G+R + +LG RRA AV +Y
Sbjct: 66 SDSSDLTPTATATLDKQASWLQRYSRYSFLIEGHADERGTREYNYSLGARRAQAVLDYLT 125
Query: 115 ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
+RGI+ SRM+ SYGKE P +D +++NRR++ L G +
Sbjct: 126 SRGIAPSRMRTVSYGKERPVAVCNDISCWSQNRRSVSVLDGGAGS 170
>gi|323525137|ref|YP_004227290.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1001]
gi|323382139|gb|ADX54230.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1001]
Length = 217
Score = 87.9 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 1/136 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF-L 84
+ + ++ SV FDT+SY+I+P+ VL L L+++
Sbjct: 80 SGATKGTGTQITEQPDGSLKLNIPSSVTFDTNSYAIKPSFAPVLDQLTQTLQQNPEVIAQ 139
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+ GH D G + L + RA +V + RG++ R+ G+ P E A
Sbjct: 140 VVGHTDSTGQPAYNQTLSVNRAQSVVGFLEQRGVAPQRLSAQGMGQNQPIADNSTEAGRA 199
Query: 145 KNRRAIVFLKGCRANT 160
NRR ++L+ +T
Sbjct: 200 ANRRVEIYLRATAQHT 215
>gi|256822902|ref|YP_003146865.1| OmpA/MotB domain-containing protein [Kangiella koreensis DSM 16069]
gi|256796441|gb|ACV27097.1| OmpA/MotB domain protein [Kangiella koreensis DSM 16069]
Length = 221
Score = 87.9 bits (216), Expect = 4e-16, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHA 89
T + EQ + + F T Y+I VL ++ + D + + G
Sbjct: 92 AGTGVGVQRDGEQIHLIMPGDITFQTDRYAIDSGFYPVLDSVSKVLYKFKDTNLEVAGFT 151
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D +GS + + L +RA +V +Y R I +R++V YG+ P E +KNRR
Sbjct: 152 DSVGSDSYNQELSEKRANSVASYLRQREIPNNRLRVVGYGERYPVAPNETEAGRSKNRRV 211
Query: 150 IVFL 153
+ +
Sbjct: 212 ELTI 215
>gi|108756980|ref|YP_628607.1| OmpA family protein [Myxococcus xanthus DK 1622]
gi|108460860|gb|ABF86045.1| OmpA family protein [Myxococcus xanthus DK 1622]
Length = 409
Score = 87.6 bits (215), Expect = 5e-16, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 59/128 (46%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI 85
T++ S + + ++ V F +++ + P + L+ + L+ D +I
Sbjct: 261 TQLESTARDVKVREEERGLVLTMSGQVLFASNAVDLLPTAREQLTEVAHALKVSDSPMVI 320
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
EGH D +GS + AL RRA V + +++G+S R++V G+ P + A
Sbjct: 321 EGHTDSMGSDAMNEALSYRRAEHVREFLISQGVSRDRIQVRGLGEYRPVANNSTPEGRAN 380
Query: 146 NRRAIVFL 153
NRR + L
Sbjct: 381 NRRVEIIL 388
>gi|312131420|ref|YP_003998760.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132]
gi|311907966|gb|ADQ18407.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132]
Length = 532
Score = 87.6 bits (215), Expect = 5e-16, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 2/124 (1%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHA 89
L + ++ + ++ + VFF+ + ++ L + ++ + ++GH
Sbjct: 407 TGQDLETAPIKAGTAITLNN-VFFEFAKATLEKESFLELDRLIALLVKNPNMAIEVQGHT 465
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D +GS N+++ L +RA AV YFV +GI+ R+ T +G+ P + AKNRR
Sbjct: 466 DNVGSDNANMRLSQQRADAVKAYFVEKGIATDRITSTGFGESRPVASNETTEGQAKNRRV 525
Query: 150 IVFL 153
+
Sbjct: 526 EFVI 529
>gi|257463423|ref|ZP_05627818.1| Outer membrane porin F [Fusobacterium sp. D12]
gi|317060987|ref|ZP_07925472.1| outer membrane porin F [Fusobacterium sp. D12]
gi|313686663|gb|EFS23498.1| outer membrane porin F [Fusobacterium sp. D12]
Length = 193
Score = 87.6 bits (215), Expect = 5e-16, Method: Composition-based stats.
Identities = 33/179 (18%), Positives = 64/179 (35%), Gaps = 26/179 (14%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQ-------------------- 41
+Y + ++L++ + + N + S + N +
Sbjct: 13 KYLGMTVLLASFVLAACGKTSNTSVRDLSTEGNQNFAIEDIDTAKKPLEDIIVFNQDGVT 72
Query: 42 -----EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
S+ + + FD Y ++ L L + D I+G+ D +GS
Sbjct: 73 IRREGNNLILSMPELILFDFDKYEVKDGIKPSLRTLANALGANSDIKIKIDGYTDFIGSE 132
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
++ L + RA A+ +Y V G + + + YGK+ P E A+NRR +
Sbjct: 133 GYNLELSVNRAKAIKSYLVNHGAIENNISIEGYGKQNPVASNATESGRARNRRVEFIIS 191
>gi|167561951|ref|ZP_02354867.1| ompA family protein [Burkholderia oklahomensis EO147]
gi|167569201|ref|ZP_02362075.1| ompA family protein [Burkholderia oklahomensis C6786]
Length = 215
Score = 87.6 bits (215), Expect = 5e-16, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 56/140 (40%), Gaps = 1/140 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
I N + +V SV F T Y++ PA +L++L S +
Sbjct: 74 AIKNKLAPSAQQTGTQVTEQPDGSLKLNVPSSVTFATDQYAVTPAFTPLLNDLASTLNQN 133
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ G+ D GS + L RA +V N RG++ASR+ G P
Sbjct: 134 PQITASVVGYTDSTGSAAHNQTLSQNRAQSVVNAMSQRGVAASRLSAQGMGASNPIADNA 193
Query: 139 DEDAYAKNRRAIVFLKGCRA 158
E A+NRR ++L+ +A
Sbjct: 194 TEAGRAQNRRVEIYLRAPQA 213
>gi|83644283|ref|YP_432718.1| outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hahella chejuensis KCTC 2396]
gi|83632326|gb|ABC28293.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hahella chejuensis KCTC 2396]
Length = 169
Score = 87.6 bits (215), Expect = 5e-16, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 62/168 (36%), Gaps = 13/168 (7%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---------- 50
M+ + F +L+A ++ +S + + + V+ E + E +
Sbjct: 1 MKNLSKFSLLAA-AVIGLSACASSQPEPVVEEPVVIEPAQPEPVVEPAPEPVVEAAPAPS 59
Query: 51 -SVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYA 108
++ F S I P + L S++++ + GHAD+ GS + + L RA +
Sbjct: 60 ANIEFAFDSSKIGPGEQSDLQQWASYIQEGAYNRVEVHGHADDTGSADYNRKLSADRANS 119
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
V +G+E P DE NRR + +G
Sbjct: 120 TVQALRNLVSGQVDFVVVPHGEEQPLAENSDEQGRQLNRRVEIVPQGA 167
>gi|262403402|ref|ZP_06079961.1| outer membrane protein A precursor [Vibrio sp. RC586]
gi|262350394|gb|EEY99528.1| outer membrane protein A precursor [Vibrio sp. RC586]
Length = 332
Score = 87.6 bits (215), Expect = 5e-16, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 48/141 (34%), Gaps = 2/141 (1%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
++ + ++ + + F F S I L+ +
Sbjct: 186 ALVEAAPTSIIEDTPVKETVTVKTPPQIQTFLPKTT-VGLFGFDSVEPSQEFIDQLTEIS 244
Query: 74 SW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
S + + GH D GS + + RA AV N + G++ ++++ G+
Sbjct: 245 SVLISYPQAQAKVVGHTDSTGSALYNQNISEHRAQAVVNKLIELGVTPTQLEWRGEGEFQ 304
Query: 133 PSVYGHDEDAYAKNRRAIVFL 153
P + + A NRR + +
Sbjct: 305 PVADNNTAEGRAANRRVEITI 325
>gi|146337865|ref|YP_001202913.1| hypothetical protein BRADO0750 [Bradyrhizobium sp. ORS278]
gi|146190671|emb|CAL74675.1| hypothetical protein; putative Outer membrane protein containing
OmpA/MotB domain [Bradyrhizobium sp. ORS278]
Length = 429
Score = 87.6 bits (215), Expect = 5e-16, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
V FD + S++P +L+ + + + D + IEGH D +G + ++ L RA +V
Sbjct: 322 VLFDFNKASLKPESEPLLTKVAALVTARPDLNAEIEGHTDNVGGDDYNMRLSDARAASVR 381
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
+ G++A+R+ YGK P + A NRR + GCR
Sbjct: 382 TWLTQHGVAAARLTSHGYGKTRPVADNGTDQGRALNRRVEIVKLGCR 428
>gi|325286152|ref|YP_004261942.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
gi|324321606|gb|ADY29071.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
Length = 452
Score = 87.6 bits (215), Expect = 5e-16, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 6/136 (4%)
Query: 22 DNLDTKISSPDTVLN-----ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
D D TV N + ++ + ++ FDT SI+ V+ ++ + L
Sbjct: 313 DKDDKCPEVAGTVANNGCPEVTEEVQKKLNDYARTILFDTGKSSIKAESTAVMVDIITIL 372
Query: 77 EKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+++ F +EGH D +GS + L RA +V + V +GI R+ YG++ P
Sbjct: 373 KEYPNAKFTVEGHTDSVGSATLNQKLSESRALSVKEFLVEKGIGEFRLSAVGYGEDKPIA 432
Query: 136 YGHDEDAYAKNRRAIV 151
+NRR +
Sbjct: 433 TNKTRAGRKQNRRVEI 448
>gi|257466649|ref|ZP_05630960.1| Outer membrane protein [Fusobacterium gonidiaformans ATCC 25563]
Length = 217
Score = 87.6 bits (215), Expect = 5e-16, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+T + E S + V F + S I L+++ ++ + L++GH D
Sbjct: 90 NTAVQVQRDGENISLYLPGGVTFASDSAQISGNFYSALNSIAQVLVQYPETQILVQGHTD 149
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS ++ L RRA +V Y + +G++++R+ +G P D NRR
Sbjct: 150 NTGSFQHNMDLSNRRANSVKQYLIGQGVASNRLMSQGFGPNNPVADNSTPDGRQMNRRVE 209
Query: 151 VFL 153
+ +
Sbjct: 210 IKI 212
>gi|253990432|ref|YP_003041788.1| peptidoglycan-associated outer membrane lipoprotein [Photorhabdus
asymbiotica subsp. asymbiotica ATCC 43949]
gi|253781882|emb|CAQ85046.1| peptidoglycan-associated lipoprotein [Photorhabdus asymbiotica]
Length = 175
Score = 87.6 bits (215), Expect = 5e-16, Method: Composition-based stats.
Identities = 55/164 (33%), Positives = 82/164 (50%), Gaps = 13/164 (7%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDTV--------LNESSLQEQFSSSV 48
MQ + + + L + + + S N D + TV E + Q+
Sbjct: 10 MQLNKVLKGLMLALPVMAVAACSSNKNADNDQTGVGTVNETNAGLSAEELARQQMQELQN 69
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAY 107
+ V+F Y I Q+L ++L + ++EGHADE G+ +IALG RRA
Sbjct: 70 NNIVYFGFDKYDISSDFSQLLDAHAAFLRSNPSYKVVVEGHADERGTPEYNIALGERRAN 129
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
AV Y +G+S ++ + SYGKE P+V GHDE AYAKNRRA++
Sbjct: 130 AVKMYLQGKGVSGEQISIVSYGKEKPAVLGHDEAAYAKNRRAVL 173
>gi|319787272|ref|YP_004146747.1| OmpA/MotB domain protein [Pseudoxanthomonas suwonensis 11-1]
gi|317465784|gb|ADV27516.1| OmpA/MotB domain protein [Pseudoxanthomonas suwonensis 11-1]
Length = 226
Score = 87.6 bits (215), Expect = 5e-16, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 1/129 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHA 89
T ++ + + + ++ +V F +S ++ P VLS++ L ++D + + GH
Sbjct: 98 QGTGVSVTRNGDNITLNMPGNVTFGFNSANLDPQFYPVLSSVAEVLREYDKTVVEVAGHT 157
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D +G + L +RA AV + V++ I+ R GK P E A NRR
Sbjct: 158 DSVGGDEVNQRLSEQRANAVTQFLVSQNINPQRFITVGAGKRYPIASNDTEAGRAANRRV 217
Query: 150 IVFLKGCRA 158
+ L R+
Sbjct: 218 EITLVPVRS 226
>gi|258593360|emb|CBE69699.1| OmpA/MotB precursor [NC10 bacterium 'Dutch sediment']
Length = 249
Score = 87.6 bits (215), Expect = 5e-16, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 56/131 (42%), Gaps = 1/131 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
D D +P V + + + V F +S + + +L + + D
Sbjct: 115 DYKDQCPGTPSGVKVNRLGCPERKAIILKGVNFAFNSAELTTESLTILDGVAEILSKHPD 174
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
I GH D +G+ + + L RRA +V NY + G++A+++ +G+E P +
Sbjct: 175 LKVTIAGHTDSVGTADYNKKLSQRRAESVRNYLASHGVNAAKLTAVGFGEEQPIASNDEA 234
Query: 141 DAYAKNRRAIV 151
+ KNRR +
Sbjct: 235 EGRTKNRRVEL 245
>gi|310819615|ref|YP_003951973.1| OmpA domain-containing protein [Stigmatella aurantiaca DW4/3-1]
gi|309392687|gb|ADO70146.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 593
Score = 87.6 bits (215), Expect = 5e-16, Method: Composition-based stats.
Identities = 37/140 (26%), Positives = 60/140 (42%), Gaps = 10/140 (7%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFS--------SSVGDSVFFDTSSYSIRPADIQVLSNLG 73
D+ D + P N+ +Q + D V+FD+ +I P ++L +
Sbjct: 444 DHRDNCPNEPGPAANQGCPVQQPQLVEIQRDRIEIKDKVYFDSDKATILPRSNKLLDQVA 503
Query: 74 SWLEKHDC--DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
+ +H IEGH DE GS++ + L +RA V +Y V RG+ R+ YG++
Sbjct: 504 RIIIEHPELEKIWIEGHTDERGSQDYNRELSQKRAEEVRDYLVTRGVPIGRLVPKGYGRQ 563
Query: 132 MPSVYGHDEDAYAKNRRAIV 151
P + A NRR
Sbjct: 564 YPVASNDTVEGRAANRRVEF 583
>gi|115378003|ref|ZP_01465184.1| OmpA/MotB [Stigmatella aurantiaca DW4/3-1]
gi|115364980|gb|EAU64034.1| OmpA/MotB [Stigmatella aurantiaca DW4/3-1]
Length = 636
Score = 87.6 bits (215), Expect = 5e-16, Method: Composition-based stats.
Identities = 37/140 (26%), Positives = 60/140 (42%), Gaps = 10/140 (7%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFS--------SSVGDSVFFDTSSYSIRPADIQVLSNLG 73
D+ D + P N+ +Q + D V+FD+ +I P ++L +
Sbjct: 487 DHRDNCPNEPGPAANQGCPVQQPQLVEIQRDRIEIKDKVYFDSDKATILPRSNKLLDQVA 546
Query: 74 SWLEKHDC--DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
+ +H IEGH DE GS++ + L +RA V +Y V RG+ R+ YG++
Sbjct: 547 RIIIEHPELEKIWIEGHTDERGSQDYNRELSQKRAEEVRDYLVTRGVPIGRLVPKGYGRQ 606
Query: 132 MPSVYGHDEDAYAKNRRAIV 151
P + A NRR
Sbjct: 607 YPVASNDTVEGRAANRRVEF 626
>gi|261211335|ref|ZP_05925623.1| outer membrane protein A precursor [Vibrio sp. RC341]
gi|260839290|gb|EEX65916.1| outer membrane protein A precursor [Vibrio sp. RC341]
Length = 322
Score = 87.6 bits (215), Expect = 5e-16, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
+ V+ + ++ + F+ DS F T+S ++PA ++ L + + +
Sbjct: 181 QRPAEPAPVAEPVVEKVAVTKTFTFQHLDSSTFATASAELKPATVKKLDKIVGYLNQYPQ 240
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ GH D GS + L RRA AV A+GI ASR+ G+ P
Sbjct: 241 AKVEVVGHTDSTGSDAYNQKLSERRAQAVAKALEAQGIDASRISAKGLGESSPIASNTTA 300
Query: 141 DAYAKNRRAIVFL 153
+ KNRR + +
Sbjct: 301 EGREKNRRVELVI 313
>gi|325294095|ref|YP_004279959.1| porin [Agrobacterium sp. H13-3]
gi|325061948|gb|ADY65639.1| porin [Agrobacterium sp. H13-3]
Length = 220
Score = 87.6 bits (215), Expect = 5e-16, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 1/129 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHA 89
T ++ + + ++ ++ F T + P Q L ++ L K + I GH
Sbjct: 92 QGTGVSVTRRGDSIVLNMPSNITFATDQDQVIPPFYQTLDSVAIVLNKFNRTLIDINGHT 151
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GS+ + AL RRA +V NY ARG+ R+ +G P D A+NRR
Sbjct: 152 DSTGSQQHNQALSERRAASVANYLGARGVDQRRISTLGFGPSQPIASNATPDGRAQNRRV 211
Query: 150 IVFLKGCRA 158
V + +
Sbjct: 212 EVLISPLKG 220
>gi|194337186|ref|YP_002018980.1| peptidoglycan-associated lipoprotein [Pelodictyon
phaeoclathratiforme BU-1]
gi|194309663|gb|ACF44363.1| peptidoglycan-associated lipoprotein [Pelodictyon
phaeoclathratiforme BU-1]
Length = 157
Score = 87.6 bits (215), Expect = 5e-16, Method: Composition-based stats.
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 2/153 (1%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ +++ + + G P + +GD VF+D
Sbjct: 4 MKPLLRSLVIPTMLFLGACGCGKEVVVAPPPPPLPPPPPPVVVVMPGLGD-VFYDFDRSE 62
Query: 61 IRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
+R ++ L +W++ + +IEGH DE G+ ++ALG RRA + +Y V G++
Sbjct: 63 LRADAVEQLKTNFNWIQANTEKSVIIEGHCDERGTAEYNLALGQRRANSAKDYIVNLGVA 122
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
R+K S+G+E P G +E+A+A+NRRA
Sbjct: 123 PVRLKTVSFGEEKPFADGSNEEAWAQNRRAHFV 155
>gi|296329053|ref|ZP_06871559.1| proteobacterial sortase system OmpA family protein [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
gi|296153857|gb|EFG94669.1| proteobacterial sortase system OmpA family protein [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
Length = 208
Score = 87.6 bits (215), Expect = 5e-16, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 46/124 (37%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHA 89
T ++ V F + S +I L+ + + + G+
Sbjct: 81 QGTQAQVRKDGNALVINLPGGVTFASDSANITSGFYSALNGIAQSLNNYPETRIQVNGYT 140
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G + L RRA AV Y +A+G+S++R+ +G P + +NRR
Sbjct: 141 DNTGKDAHNQELSQRRANAVAQYLIAQGVSSNRIVANGFGSSNPIASNSTPEGRLQNRRV 200
Query: 150 IVFL 153
+ +
Sbjct: 201 EIKI 204
>gi|167629589|ref|YP_001680088.1| flagellar motor protein motb, putative [Heliobacterium
modesticaldum Ice1]
gi|167592329|gb|ABZ84077.1| flagellar motor protein motb, putative [Heliobacterium
modesticaldum Ice1]
Length = 298
Score = 87.6 bits (215), Expect = 5e-16, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 47/127 (37%), Gaps = 5/127 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ + + ++E S D+ FD+ ++ + L + L + I GH D
Sbjct: 110 EKQVETNLVREGLQISFRDAALFDSGKADLKREALPALDLIADTLHNLSNEVRIAGHTDN 169
Query: 92 LGS----RNSSIALGLRRAYAVFNY-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
L S+ L +RA V Y + + + YG+ P + A+N
Sbjct: 170 LPISTAEFPSNWDLSAKRALNVMKYILNDKRNNPVKFTAVGYGEYHPKATNDTPEGRAQN 229
Query: 147 RRAIVFL 153
RR V +
Sbjct: 230 RRVEVMI 236
>gi|15838494|ref|NP_299182.1| outer membrane protein P6 precursor [Xylella fastidiosa 9a5c]
gi|9106989|gb|AAF84702.1|AE004009_9 outer membrane protein P6 precursor [Xylella fastidiosa 9a5c]
Length = 186
Score = 87.6 bits (215), Expect = 5e-16, Method: Composition-based stats.
Identities = 38/174 (21%), Positives = 68/174 (39%), Gaps = 22/174 (12%)
Query: 1 MQYSTIFIILSAITMMSISGIDNL-------DTKISSPDTVLN--------------ESS 39
M ST F+++S ++ ++ K +P ++
Sbjct: 9 MNNSTRFLLISLLSTSALVACSKKVKEQPHVPVKTMAPTVSTPAPTTTAPTDSSGLYTAA 68
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSS 98
+ + V+FD ++ VL + + ++G+ DE GSR +
Sbjct: 69 DLDTDACLRQRVVYFDFDKDDVKKEFQTVLGCHAKYLRNRPSAHITLQGNTDERGSREYN 128
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
IALG RR +V A G S+ ++ V SYG+E P E +++NRR +
Sbjct: 129 IALGERRGNSVLYSLQANGASSGQLNVVSYGEERPVCTESTESCWSRNRRVEIV 182
>gi|107026300|ref|YP_623811.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
gi|116692511|ref|YP_838044.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
HI2424]
gi|170738239|ref|YP_001779499.1| peptidoglycan-associated lipoprotein [Burkholderia cenocepacia
MC0-3]
gi|105895674|gb|ABF78838.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
gi|116650511|gb|ABK11151.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424]
gi|169820427|gb|ACA95009.1| peptidoglycan-associated lipoprotein [Burkholderia cenocepacia
MC0-3]
Length = 163
Score = 87.6 bits (215), Expect = 5e-16, Method: Composition-based stats.
Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 9/163 (5%)
Query: 1 MQYSTIFIILSAITMMSIS--GIDNLDTKISSPDT------VLNESSLQEQFSSSVGDSV 52
M +L+ +++ + ++P+ + L S S+
Sbjct: 1 MSKMNRIAVLATFVLLAGCHNAAKTPENAAAAPEPSSETVATVTADDLNNPNSPLAKRSI 60
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFN 111
+FD YS++P +L +L H LI+G+ DE G+ ++ALG RR+ AV +
Sbjct: 61 YFDFDQYSVKPEFQSLLQAHADYLRSHPARRVLIQGNTDERGTSEYNLALGQRRSQAVAS 120
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G+ A++++ S GKE P GHDE+A+A+NRRA + +
Sbjct: 121 ALETLGVPATQLEAVSLGKEKPVALGHDEEAWAQNRRADLVYR 163
>gi|320106074|ref|YP_004181664.1| OmpA/MotB domain-containing protein [Terriglobus saanensis SP1PR4]
gi|319924595|gb|ADV81670.1| OmpA/MotB domain protein [Terriglobus saanensis SP1PR4]
Length = 524
Score = 87.6 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 53/128 (41%), Gaps = 2/128 (1%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEG 87
+++L S+ D V FDT Y+++ L+ + + H +EG
Sbjct: 385 DQLNSILATKETPRGLVVSLSD-VLFDTGKYTLKGDTKISLAKVAVIVASHPDLKLQVEG 443
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+ D +GS + + L RA +V + +A ++ + YGK P A+NR
Sbjct: 444 YTDSVGSDDLNQKLSENRANSVKAFLIANSVNPGNITSLGYGKSHPVADNGTSAGRAQNR 503
Query: 148 RAIVFLKG 155
R + + G
Sbjct: 504 RVELVISG 511
>gi|312195438|ref|YP_004015499.1| OmpA/MotB domain protein [Frankia sp. EuI1c]
gi|311226774|gb|ADP79629.1| OmpA/MotB domain protein [Frankia sp. EuI1c]
Length = 440
Score = 87.6 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 48/136 (35%), Gaps = 6/136 (4%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
++ Q S + V F S ++ P+ + + L + I G+ D
Sbjct: 162 ATETDPAAATPAQTSFRLPSDVLFAFGSSTLSPSAARAIDALAHQITATSGTVTIAGYTD 221
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG------HDEDAYA 144
+G+ + AL L RA AV A K +G+ P + D A
Sbjct: 222 SIGTDADNQALSLARASAVRQAIAATLGPDFTYKAVGFGETSPVAPNTHQDGSDNPDGRA 281
Query: 145 KNRRAIVFLKGCRANT 160
+NRR + + +T
Sbjct: 282 RNRRVELTVDAATGDT 297
>gi|206560984|ref|YP_002231749.1| putative OmpA family membrane protein [Burkholderia cenocepacia
J2315]
gi|198037026|emb|CAR52947.1| putative OmpA family membrane protein [Burkholderia cenocepacia
J2315]
Length = 215
Score = 87.6 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 55/136 (40%), Gaps = 1/136 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
I N ++ +V SV F T+ Y+I PA +L++L + +
Sbjct: 74 AIKNKLAPSAAQTGTQVTEQPDGSLKLNVPSSVTFATNQYAITPAFTPLLNDLATTLNQN 133
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
I G+ D GS + L RA +V N V RG++ R+ G P
Sbjct: 134 PQVTASIVGYTDSTGSAQLNQTLSQNRAQSVVNALVQRGVNGGRLSAQGMGASNPIADNA 193
Query: 139 DEDAYAKNRRAIVFLK 154
E A+NRR ++L+
Sbjct: 194 TEAGRAQNRRVEIYLR 209
>gi|310817592|ref|YP_003949950.1| OmpA domain-containing protein [Stigmatella aurantiaca DW4/3-1]
gi|309390664|gb|ADO68123.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 640
Score = 87.6 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 61/142 (42%), Gaps = 10/142 (7%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--------SSVGDSVFFDTSSYSIRPADIQVLSNL 72
D+LD + N+ +Q + ++V+FD+ +I+ ++L +
Sbjct: 490 SDHLDNCPNEAGPASNQGCPAKQKQLVAIRQDRIDIKETVYFDSGKATIQRRSFKLLDQV 549
Query: 73 GSWLEKHDC--DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
L +H +EGH D +G +++ L +RA AV +Y +G++ R++ YG+
Sbjct: 550 AKLLREHPEIESITVEGHTDNVGKPEANLRLSQQRAEAVRDYLARKGVAPQRLEAKGYGQ 609
Query: 131 EMPSVYGHDEDAYAKNRRAIVF 152
E P A NRR
Sbjct: 610 ERPIAPNTTSKGRATNRRVDFI 631
>gi|115373816|ref|ZP_01461109.1| thrombospondin type 3 repeat family [Stigmatella aurantiaca
DW4/3-1]
gi|115369215|gb|EAU68157.1| thrombospondin type 3 repeat family [Stigmatella aurantiaca
DW4/3-1]
Length = 669
Score = 87.6 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 61/142 (42%), Gaps = 10/142 (7%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--------SSVGDSVFFDTSSYSIRPADIQVLSNL 72
D+LD + N+ +Q + ++V+FD+ +I+ ++L +
Sbjct: 519 SDHLDNCPNEAGPASNQGCPAKQKQLVAIRQDRIDIKETVYFDSGKATIQRRSFKLLDQV 578
Query: 73 GSWLEKHDC--DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
L +H +EGH D +G +++ L +RA AV +Y +G++ R++ YG+
Sbjct: 579 AKLLREHPEIESITVEGHTDNVGKPEANLRLSQQRAEAVRDYLARKGVAPQRLEAKGYGQ 638
Query: 131 EMPSVYGHDEDAYAKNRRAIVF 152
E P A NRR
Sbjct: 639 ERPIAPNTTSKGRATNRRVDFI 660
>gi|254492090|ref|ZP_05105265.1| hypothetical protein MDMS009_2433 [Methylophaga thiooxidans DMS010]
gi|224462642|gb|EEF78916.1| hypothetical protein MDMS009_2433 [Methylophaga thiooxydans DMS010]
Length = 224
Score = 87.6 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADELGSRNSSI 99
E + + V FD S +++ A LS + L+++ + + GH D +GS + +
Sbjct: 96 NETLKIDIANEVSFDFDSAALKSAFTPTLSKVADVLQRYPNTIIHVVGHTDSVGSESYNQ 155
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L RRA +V +YF +RG++ R+ G+ P E NRR +F+K
Sbjct: 156 RLSERRAQSVVDYFSSRGVATGRLYAIGRGETEPRATNETEAGRQLNRRVEIFVK 210
>gi|221199341|ref|ZP_03572385.1| ompA family protein [Burkholderia multivorans CGD2M]
gi|221205757|ref|ZP_03578772.1| ompA family protein [Burkholderia multivorans CGD2]
gi|221211556|ref|ZP_03584535.1| inner membrane lipoprotein YiaD [Burkholderia multivorans CGD1]
gi|221168917|gb|EEE01385.1| inner membrane lipoprotein YiaD [Burkholderia multivorans CGD1]
gi|221174595|gb|EEE07027.1| ompA family protein [Burkholderia multivorans CGD2]
gi|221180626|gb|EEE13029.1| ompA family protein [Burkholderia multivorans CGD2M]
Length = 214
Score = 87.6 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 1/136 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
I N ++ +V SV F T+ Y+I PA +L++L + +
Sbjct: 74 AIKNKLAPSAAQTGTQVTEQPDGSLKLNVPSSVTFATNQYAITPAFTPLLNDLATTLNQN 133
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ G+ D GS + L RA +V N V RG++ +R+ G P
Sbjct: 134 PQVTASVIGYTDSTGSAQLNQTLSQNRAQSVVNALVQRGVAGNRLSAQGMGPSNPVADNS 193
Query: 139 DEDAYAKNRRAIVFLK 154
E A+NRR ++L+
Sbjct: 194 TEAGRAQNRRVEIYLR 209
>gi|300312990|ref|YP_003777082.1| signal peptide protein [Herbaspirillum seropedicae SmR1]
gi|124483422|emb|CAM32584.1| signal peptide protein [Herbaspirillum seropedicae]
gi|300075775|gb|ADJ65174.1| signal peptide protein [Herbaspirillum seropedicae SmR1]
Length = 203
Score = 87.6 bits (215), Expect = 6e-16, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FFD +++PA L L L+ + + +I GH D +GS + L +R
Sbjct: 90 VTYAADAFFDFDKATLKPAGKAKLDELVGNLKAINLEVIIAVGHTDSIGSVAYNQKLSVR 149
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
RA +V Y V++G+ A+R+ GK P AKNRR + + G R
Sbjct: 150 RAESVKAYLVSKGVEANRVYTEGKGKSQPVADNKTAAGRAKNRRVEIEVVGTR 202
>gi|161524037|ref|YP_001579049.1| OmpA/MotB domain-containing protein [Burkholderia multivorans ATCC
17616]
gi|189351202|ref|YP_001946830.1| putative OmpA family transmembrane protein [Burkholderia
multivorans ATCC 17616]
gi|160341466|gb|ABX14552.1| OmpA/MotB domain protein [Burkholderia multivorans ATCC 17616]
gi|189335224|dbj|BAG44294.1| putative OmpA family transmembrane protein [Burkholderia
multivorans ATCC 17616]
Length = 214
Score = 87.2 bits (214), Expect = 6e-16, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 1/136 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
I N ++ +V SV F T+ Y+I PA +L++L + +
Sbjct: 74 AIKNKLAPSAAQTGTQVTEQPDGSLKLNVPSSVTFATNQYAITPAFTPLLNDLATTLNQN 133
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ G+ D GS + L RA +V N V RG++ +R+ G P
Sbjct: 134 PQVTASVIGYTDSTGSAQLNQTLSQNRAQSVVNALVQRGVAGNRLSAQGMGPSNPVADNS 193
Query: 139 DEDAYAKNRRAIVFLK 154
E A+NRR ++L+
Sbjct: 194 TEAGRAQNRRVEIYLR 209
>gi|170691988|ref|ZP_02883152.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
gi|170143272|gb|EDT11436.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
Length = 217
Score = 87.2 bits (214), Expect = 6e-16, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 58/136 (42%), Gaps = 1/136 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF-L 84
+ + ++ SV FDT+SY+I+P+ VL L L+++
Sbjct: 80 SGATKGTGTQITEQPDGSLKLNIPSSVTFDTNSYAIKPSFAPVLDQLTQTLQQNPEVIAQ 139
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+ GH D G + L + RA +V Y RG++ R+ G+ P + E A
Sbjct: 140 VVGHTDSTGQPAYNQTLSVNRAQSVTGYLAQRGVAPQRLSAEGMGQNQPIADNNTEAGRA 199
Query: 145 KNRRAIVFLKGCRANT 160
NRR ++L+ +T
Sbjct: 200 ANRRVEIYLRATAQHT 215
>gi|332160220|ref|YP_004296797.1| putative lipoprotein [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|318607214|emb|CBY28712.1| integral membrane protein YfiB [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325664450|gb|ADZ41094.1| putative lipoprotein [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
Length = 169
Score = 87.2 bits (214), Expect = 6e-16, Method: Composition-based stats.
Identities = 30/158 (18%), Positives = 63/158 (39%), Gaps = 6/158 (3%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESS-----LQEQFSSSVGDSVFFDT 56
Q + ++I A+ ++ + G + +P+ + + + + V FD+
Sbjct: 9 QKNPLWISFFALCLLVLVGCQAKPHQGLTPEQIAALQEQGFKLTDNGWVFGLANKVLFDS 68
Query: 57 SSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA 115
+ + +Q + N+G ++G+ D +G + L +RA AV + A
Sbjct: 69 DVRKLNASGVQTVQNIGRALHNVGINHMRVDGYTDAIGEDGYNQQLSFQRASAVADTLAA 128
Query: 116 RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
GI + ++V GK P A+NRR + +
Sbjct: 129 IGIPRANIEVRGRGKLEPVADNRTAKGRAENRRVAIIV 166
>gi|227538390|ref|ZP_03968439.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33300]
gi|227241772|gb|EEI91787.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33300]
Length = 438
Score = 87.2 bits (214), Expect = 6e-16, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 57/136 (41%), Gaps = 1/136 (0%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
+G + + ++ + ++ ++ D F D +IRP L + S L
Sbjct: 303 GAGCPLPVAETKVVEKIVVTEADKKVVDEAIKDLEF-DLGKSTIRPTSYPSLDRVASLLI 361
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+ + + GH D GS +++ L RA AV Y ++G + SR++ T YG P
Sbjct: 362 EKNFSLKLAGHTDNTGSMQTNLRLSKERAEAVKAYLTSKGANPSRIEATGYGPNQPIATN 421
Query: 138 HDEDAYAKNRRAIVFL 153
+ +NRR L
Sbjct: 422 ATAEGRQQNRRVEFTL 437
>gi|148258086|ref|YP_001242671.1| outer membrane lipoprotein omp16 [Bradyrhizobium sp. BTAi1]
gi|146410259|gb|ABQ38765.1| Outer membrane lipoprotein omp16 precursor
(peptidoglycan-associated lipoprotein) [Bradyrhizobium
sp. BTAi1]
Length = 149
Score = 87.2 bits (214), Expect = 6e-16, Method: Composition-based stats.
Identities = 55/146 (37%), Positives = 75/146 (51%), Gaps = 2/146 (1%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
+L+ M NL T Q+ F +VGD VFF++ + P I
Sbjct: 1 MLAVALSMGACANKNL-TGADGAMASAATPGSQQDFVVNVGDRVFFESDQTDLTPQAIAT 59
Query: 69 LSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
L WL+ + F IEGHADE G+R +IALG RRA +V N+ V+RGI RM+ S
Sbjct: 60 LEKQAQWLQTYPRYSFTIEGHADERGTREYNIALGARRAQSVRNFLVSRGIDQGRMRTIS 119
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFL 153
YGKE P +D +++NRRA+ L
Sbjct: 120 YGKERPVAVCNDISCWSQNRRAVTVL 145
>gi|326389648|ref|ZP_08211214.1| OmpA/MotB domain protein [Thermoanaerobacter ethanolicus JW 200]
gi|325994363|gb|EGD52789.1| OmpA/MotB domain protein [Thermoanaerobacter ethanolicus JW 200]
Length = 237
Score = 87.2 bits (214), Expect = 6e-16, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 52/133 (39%), Gaps = 5/133 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
++ + S+ DS+ FD S + P + VL +G+ L+ +EG D+
Sbjct: 98 QGMVTSYIDERGLVISMQDSLLFDLGSADVHPEEKDVLIKIGNMLKTLPNHIRVEGFTDD 157
Query: 92 LGSRNS----SIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
L NS + L + RA V V I R+ YG+ P V E+ N
Sbjct: 158 LPIHNSKFDSNWELSVIRATNVVKILVNEVGIEPQRISAVGYGEYRPVVPNDSEEHRRLN 217
Query: 147 RRAIVFLKGCRAN 159
RR + + N
Sbjct: 218 RRVDIVIMNTEYN 230
>gi|167585789|ref|ZP_02378177.1| ompA family protein [Burkholderia ubonensis Bu]
Length = 166
Score = 87.2 bits (214), Expect = 6e-16, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 55/139 (39%), Gaps = 1/139 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
I N ++ +V SV F T+ Y+I PA +L++L + +
Sbjct: 27 AIKNKLAPSAAQTGTQVTEQPDGSLKLNVPSSVTFATNQYAITPAFTPLLNDLATTLNQN 86
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ G+ D GS + L RA +V N RG++ R+ G P
Sbjct: 87 PQVTASVVGYTDSTGSAGLNQTLSQNRAQSVVNALTQRGVAGGRLSAQGMGASNPIADNA 146
Query: 139 DEDAYAKNRRAIVFLKGCR 157
E A+NRR ++L+ +
Sbjct: 147 TEAGRAQNRRVEIYLRAAQ 165
>gi|315917803|ref|ZP_07914043.1| outer membrane protein [Fusobacterium gonidiaformans ATCC 25563]
gi|313691678|gb|EFS28513.1| outer membrane protein [Fusobacterium gonidiaformans ATCC 25563]
Length = 204
Score = 87.2 bits (214), Expect = 6e-16, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+T + E S + V F + S I L+++ ++ + L++GH D
Sbjct: 77 NTAVQVQRDGENISLYLPGGVTFASDSAQISGNFYSALNSIAQVLVQYPETQILVQGHTD 136
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS ++ L RRA +V Y + +G++++R+ +G P D NRR
Sbjct: 137 NTGSFQHNMDLSNRRANSVKQYLIGQGVASNRLMSQGFGPNNPVADNSTPDGRQMNRRVE 196
Query: 151 VFL 153
+ +
Sbjct: 197 IKI 199
>gi|78358626|ref|YP_390075.1| chemotaxis protein MotB [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78221031|gb|ABB40380.1| chemotaxis protein MotB [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 242
Score = 87.2 bits (214), Expect = 6e-16, Method: Composition-based stats.
Identities = 36/134 (26%), Positives = 57/134 (42%), Gaps = 1/134 (0%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL 84
+ ++ D L + + + D V F S+ + ++L+ L LE D
Sbjct: 103 EVDTATLDENLRIMQDPQGLAIVLTDGVLFRPGSWELTAPARKLLAPLADVLEYSSADVT 162
Query: 85 IEGHAD-ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
I GH D S + L RRA AV ++F+ G+ A R V+ YG + P
Sbjct: 163 ISGHTDDSPASGVDNYDLSGRRAMAVLDFFLESGLGAERFSVSGYGPDKPLESNATPQGR 222
Query: 144 AKNRRAIVFLKGCR 157
A+NRR + LK +
Sbjct: 223 AQNRRVEILLKTTQ 236
>gi|149371103|ref|ZP_01890698.1| OmpA domain protein [unidentified eubacterium SCB49]
gi|149355889|gb|EDM44447.1| OmpA domain protein [unidentified eubacterium SCB49]
Length = 466
Score = 87.2 bits (214), Expect = 6e-16, Method: Composition-based stats.
Identities = 38/141 (26%), Positives = 62/141 (43%), Gaps = 8/141 (5%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSV-------FFDTSSYSIRPADIQVLS-NLG 73
D D P TV + + Q + + D + FDT+ +IR + +
Sbjct: 325 DKDDECPEVPGTVARKGCPEPQITVEIMDQINEYSRTILFDTNKSTIRKESHAAIRSMID 384
Query: 74 SWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
E +FLIEGH+D GS + ++ L +RA AV + ++G+ ASR+ +G+ P
Sbjct: 385 IMNEYKTANFLIEGHSDSSGSASYNLELSKKRAAAVKTFLESKGVDASRLTSEGFGETRP 444
Query: 134 SVYGHDEDAYAKNRRAIVFLK 154
+NRR V L+
Sbjct: 445 KASNSTAAGRQENRRVEVSLR 465
>gi|258626845|ref|ZP_05721652.1| peptidoglycan-associated lipoprotein [Vibrio mimicus VM603]
gi|262165947|ref|ZP_06033684.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio mimicus
VM223]
gi|262171200|ref|ZP_06038878.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio mimicus
MB-451]
gi|258580892|gb|EEW05834.1| peptidoglycan-associated lipoprotein [Vibrio mimicus VM603]
gi|261892276|gb|EEY38262.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio mimicus
MB-451]
gi|262025663|gb|EEY44331.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio mimicus
VM223]
Length = 173
Score = 87.2 bits (214), Expect = 7e-16, Method: Composition-based stats.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 20/172 (11%)
Query: 1 MQYST----IFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQ--------------- 41
MQ + + I L + + + S D+ S S++
Sbjct: 1 MQLNKVLKGLLIALPVLAVTACSSSDDAANASGSQTNQSAVSTVDSNGLNAQGQLTEQEL 60
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIA 100
++ + +++F + +I +L+ + ++ IEGHADE G+ +IA
Sbjct: 61 KEQALRENQTIYFAFDNATIASDYEAMLAAHAAYLVKNPSLKVTIEGHADERGTPEYNIA 120
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
LG RRA AV Y A G+ + ++ + SYG+E P V G EDAYAKNRRA++
Sbjct: 121 LGERRAQAVAKYLEALGVQSGQLSIVSYGEEKPLVLGQSEDAYAKNRRAVLV 172
>gi|300722398|ref|YP_003711684.1| hypothetical protein XNC1_1421 [Xenorhabdus nematophila ATCC 19061]
gi|297628901|emb|CBJ89484.1| required for outer membrane integrity, uptake of group A colicins,
and translocation of phage DNA [Xenorhabdus nematophila
ATCC 19061]
Length = 176
Score = 87.2 bits (214), Expect = 7e-16, Method: Composition-based stats.
Identities = 56/166 (33%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDTVLNES---------SLQEQFSSS 47
MQ + + + L + + + S ++ S+ TV N + + Q+
Sbjct: 10 MQLNKVLKGLMLALPIMALAACSANKAGNSDQSNVGTVDNSAKASLSAEELARQQMQELQ 69
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRA 106
+ V+F Y I Q+L ++L + IEGHADE G+ +IALG RRA
Sbjct: 70 NNNIVYFGFDKYDINSEFAQMLDKHAAFLRTNPSVKVTIEGHADERGTPEYNIALGERRA 129
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
AV Y +G+SA ++ + SYGKE P+V GHDE AYAKNRRA++
Sbjct: 130 NAVKMYLQGKGVSADQLAIVSYGKEKPAVLGHDEAAYAKNRRAVIV 175
>gi|241663775|ref|YP_002982135.1| OmpA/MotB domain-containing protein [Ralstonia pickettii 12D]
gi|240865802|gb|ACS63463.1| OmpA/MotB domain protein [Ralstonia pickettii 12D]
Length = 209
Score = 87.2 bits (214), Expect = 7e-16, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 58/140 (41%), Gaps = 1/140 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
I + ++ ++ V FDT S I+P+ L ++ +
Sbjct: 70 AIKSKLAGDTAGTGTQISEQPDGSLKLNIPSQVSFDTDSAVIKPSFRGPLDSVAQTLTQH 129
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ + GH D G+ N ++ L +RA +V +Y RG++ +R+ G+ P
Sbjct: 130 PELAANVVGHTDSTGNPNYNMTLSQKRAQSVASYLTDRGVARNRLSAEGRGQNQPVADNA 189
Query: 139 DEDAYAKNRRAIVFLKGCRA 158
E A+NRR ++LK +
Sbjct: 190 TEAGRAQNRRVEIYLKPIQG 209
>gi|88860858|ref|ZP_01135494.1| putative lipoprotein [Pseudoalteromonas tunicata D2]
gi|88817071|gb|EAR26890.1| putative lipoprotein [Pseudoalteromonas tunicata D2]
Length = 214
Score = 87.2 bits (214), Expect = 7e-16, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 47/129 (36%), Gaps = 1/129 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHA 89
+ + + + ++ F T I L + + K++ IEGH
Sbjct: 86 AGSGVEVVREGDNLRLVMPSNITFATDQSYISTGFHDTLDAIAKVMNKYEKTFLSIEGHT 145
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G + L +RA +V NY + + I R+ +G+ P A NRR
Sbjct: 146 DSTGKTEYNQNLSEQRALSVKNYLLNKQILDVRISTQGWGESRPIASNETSSGRALNRRV 205
Query: 150 IVFLKGCRA 158
+ + +A
Sbjct: 206 EIQIVPNKA 214
>gi|238785870|ref|ZP_04629838.1| Peptidoglycan-associated lipoprotein [Yersinia bercovieri ATCC
43970]
gi|238713240|gb|EEQ05284.1| Peptidoglycan-associated lipoprotein [Yersinia bercovieri ATCC
43970]
Length = 168
Score = 87.2 bits (214), Expect = 7e-16, Method: Composition-based stats.
Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDT----------VLNESSLQEQFSS 46
MQ + + + L + + + S + + S E + +
Sbjct: 1 MQLNKVLKGLMLALPVLAVAACSSNKSANNDQSGMGAGTGTENGSNLSSEEQARLQMQEL 60
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRR 105
+ V+F Y I Q+L ++L + ++EGHADE G+ +IALG RR
Sbjct: 61 QKNNIVYFGFDKYDIGSDFAQMLDAHAAFLRSNPSYKVVVEGHADERGTPEYNIALGERR 120
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
A AV Y +G+SA ++ + SYGKE P+V GHDE A+AKNRRA++
Sbjct: 121 ANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAFAKNRRAVLV 167
>gi|307265590|ref|ZP_07547144.1| OmpA/MotB domain protein [Thermoanaerobacter wiegelii Rt8.B1]
gi|306919388|gb|EFN49608.1| OmpA/MotB domain protein [Thermoanaerobacter wiegelii Rt8.B1]
Length = 237
Score = 87.2 bits (214), Expect = 7e-16, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 52/133 (39%), Gaps = 5/133 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
++ + S+ DS+ FD S + P + VL +G+ L+ +EG D+
Sbjct: 98 QGMVTSYIDERGLVISMQDSLLFDLGSADVHPEEKDVLIKIGNMLKTLPNHIRVEGFTDD 157
Query: 92 LGSRNS----SIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
L NS + L + RA V V I R+ YG+ P V E+ N
Sbjct: 158 LPIHNSKFDSNWELSVIRATNVVKILVNEVGIEPQRISAVGYGEYRPVVPNDSEEHRRLN 217
Query: 147 RRAIVFLKGCRAN 159
RR + + N
Sbjct: 218 RRVDIVIMNTEYN 230
>gi|123443145|ref|YP_001007119.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|238752128|ref|ZP_04613611.1| Peptidoglycan-associated lipoprotein [Yersinia rohdei ATCC 43380]
gi|238765244|ref|ZP_04626173.1| Peptidoglycan-associated lipoprotein [Yersinia kristensenii ATCC
33638]
gi|332160930|ref|YP_004297507.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|122090106|emb|CAL12969.1| peptidoglycan-associated lipoprotein Pal [Yersinia enterocolitica
subsp. enterocolitica 8081]
gi|238696516|gb|EEP89304.1| Peptidoglycan-associated lipoprotein [Yersinia kristensenii ATCC
33638]
gi|238709705|gb|EEQ01940.1| Peptidoglycan-associated lipoprotein [Yersinia rohdei ATCC 43380]
gi|318604837|emb|CBY26335.1| 18k peptidoglycan-associated outer membrane lipoprotein;
Peptidoglycan-associated lipoprotein precursor; Outer
membrane protein P6; OmpA/MotB precursor [Yersinia
enterocolitica subsp. palearctica Y11]
gi|325665160|gb|ADZ41804.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|330864066|emb|CBX74143.1| peptidoglycan-associated lipoprotein [Yersinia enterocolitica
W22703]
Length = 168
Score = 87.2 bits (214), Expect = 7e-16, Method: Composition-based stats.
Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDT----------VLNESSLQEQFSS 46
MQ + + + L + + + S + + S E + +
Sbjct: 1 MQLNKVLKGLMLALPVLAIAACSSNKSANNDQSGMGAGTGTENGSNLSSEEQARLQMQEL 60
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRR 105
+ V+F Y I Q+L ++L + ++EGHADE G+ +IALG RR
Sbjct: 61 QKNNIVYFGFDKYDIGSDFAQMLDAHAAFLRSNPSYKVVVEGHADERGTPEYNIALGERR 120
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
A AV Y +G+SA ++ + SYGKE P+V GHDE A+AKNRRA++
Sbjct: 121 ANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAFAKNRRAVLV 167
>gi|319651875|ref|ZP_08005999.1| hypothetical protein HMPREF1013_02611 [Bacillus sp. 2_A_57_CT2]
gi|317396434|gb|EFV77148.1| hypothetical protein HMPREF1013_02611 [Bacillus sp. 2_A_57_CT2]
Length = 246
Score = 87.2 bits (214), Expect = 7e-16, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 51/136 (37%), Gaps = 5/136 (3%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGH 88
+ + V+ + + + + V F++ S+ + L +G+ L +EGH
Sbjct: 103 NGLEKVIVANRTERGVVLVLQEQVLFESGDASLIDSSYSFLDKVGTLLANMPNLVKVEGH 162
Query: 89 ADELGS----RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAY 143
D+ S+ L RA V Y + + R YG+ P V + +
Sbjct: 163 TDDRPITTYRYPSNWELSAARASTVIRYLTEKHNLDSHRFMAVGYGETRPIVPNSGPENW 222
Query: 144 AKNRRAIVFLKGCRAN 159
KNRR + + + N
Sbjct: 223 EKNRRVEIIISDPKFN 238
>gi|153003419|ref|YP_001377744.1| OmpA/MotB domain-containing protein [Anaeromyxobacter sp. Fw109-5]
gi|152026992|gb|ABS24760.1| OmpA/MotB domain protein [Anaeromyxobacter sp. Fw109-5]
Length = 205
Score = 87.2 bits (214), Expect = 7e-16, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 59/130 (45%), Gaps = 1/130 (0%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDF 83
D + + V + ++ + + FDT+S ++ + L+ +G + D
Sbjct: 70 DKQHKELEKVAETKRTENGILVNMKNDILFDTNSADLKGEAVTQLTQVGDILAKYADDRI 129
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
IEGH D GS + + AL +RA +V V+RG+ ++ V G+ P ++
Sbjct: 130 RIEGHTDSSGSDSLNEALSRKRADSVRTVLVSRGVREEQITVVGNGETKPIADNATKEGR 189
Query: 144 AKNRRAIVFL 153
AKNRR + +
Sbjct: 190 AKNRRVELHI 199
>gi|167035188|ref|YP_001670419.1| peptidoglycan-associated lipoprotein [Pseudomonas putida GB-1]
gi|166861676|gb|ABZ00084.1| peptidoglycan-associated lipoprotein [Pseudomonas putida GB-1]
Length = 166
Score = 87.2 bits (214), Expect = 7e-16, Method: Composition-based stats.
Identities = 40/135 (29%), Positives = 73/135 (54%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+ G +T + SL E+ + + +F+ S ++P ++ L L
Sbjct: 30 AGEGAAVDPNAGYGANTGAVDGSLSEEAALRAITTFYFEYDSSDLKPEAMRALDVHAKDL 89
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ + ++EG+ DE G+R ++ALG RRA AV Y V +G+S +++++ SYG+E P
Sbjct: 90 KSNGNRVVLEGNTDERGTREYNMALGERRAKAVQRYLVLQGVSPAQLELVSYGEERPVAT 149
Query: 137 GHDEDAYAKNRRAIV 151
G+DE ++A+NRR +
Sbjct: 150 GNDEQSWAQNRRVEL 164
>gi|330504865|ref|YP_004381734.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
gi|328919151|gb|AEB59982.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
Length = 218
Score = 87.2 bits (214), Expect = 7e-16, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 55/135 (40%), Gaps = 1/135 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
+ + T + + + ++ F ++S I + L++L ++ +
Sbjct: 82 TQEAKLRQTLQGTGVQVQRNGDDLKLIMPGNITFASNSADISSSFYPTLNSLVLVFKEFN 141
Query: 81 CD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ I GH D GS+ + +L RRA +V NY A G+ R+ G P
Sbjct: 142 KNGVNIVGHTDSTGSQELNQSLSQRRAQSVANYLTANGVPGQRISAYGAGPSQPIASNAT 201
Query: 140 EDAYAKNRRAIVFLK 154
+ A+NRR + L+
Sbjct: 202 DAGRAQNRRVEINLR 216
>gi|319899363|ref|YP_004159460.1| Outer membrane lipoprotein omp16 homolog precursor [Bartonella
clarridgeiae 73]
gi|319403331|emb|CBI76890.1| Outer membrane lipoprotein omp16 homolog precursor [Bartonella
clarridgeiae 73]
Length = 172
Score = 87.2 bits (214), Expect = 7e-16, Method: Composition-based stats.
Identities = 48/149 (32%), Positives = 79/149 (53%), Gaps = 1/149 (0%)
Query: 6 IFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPAD 65
+ + L +I + +++ ++ ++ + F+ +VGD VFF +S SI
Sbjct: 18 VLLALVGCGKKNIDATNRMNSSLNGSGLNNVQAGSSQDFTVNVGDRVFFSLNSSSIELDA 77
Query: 66 IQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L+ WL IEGHADE G+R ++ALG RRA AV ++ ++ G+S+ RMK
Sbjct: 78 EYILARQAEWLLRYPHYFVTIEGHADERGTREYNLALGQRRAVAVRDHLISLGVSSQRMK 137
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
SYGKE P D + +NRRA++ +
Sbjct: 138 TISYGKERPVALCDDISCWNQNRRAVLVV 166
>gi|319778561|ref|YP_004129474.1| OmpA/MotB domain protein [Taylorella equigenitalis MCE9]
gi|317108585|gb|ADU91331.1| OmpA/MotB domain protein [Taylorella equigenitalis MCE9]
Length = 959
Score = 87.2 bits (214), Expect = 7e-16, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 58/139 (41%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
+ + ++ + D + N + E ++ + FD++S I+P L +
Sbjct: 697 TAPAEQATTSSETAQTDELANVLDISEMSKENLDLHIVFDSASSDIQPKYNDRLDAFAKY 756
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
L + + I G+ D G S+ L RA +V NY V++G+ + + YG+ P
Sbjct: 757 LIESNRTGEISGYTDNQGDDESNKKLSAERANSVRNYLVSKGVPETNIVAVGYGEANPIA 816
Query: 136 YGHDEDAYAKNRRAIVFLK 154
+ + NRR +K
Sbjct: 817 DNNTPEGRLANRRIEFNVK 835
>gi|217976969|ref|YP_002361116.1| peptidoglycan-associated lipoprotein [Methylocella silvestris BL2]
gi|217502345|gb|ACK49754.1| peptidoglycan-associated lipoprotein [Methylocella silvestris BL2]
Length = 169
Score = 87.2 bits (214), Expect = 7e-16, Method: Composition-based stats.
Identities = 49/159 (30%), Positives = 79/159 (49%), Gaps = 4/159 (2%)
Query: 4 STIFIILSAITMMSISGIDNLDTKISSPDTVLNESS---LQEQFSSSVGDSVFFDTSSYS 60
++ +A+ + + + D + + + F+ +VGD VFF++ S
Sbjct: 11 KIAAVLGAALAISACAKNPAEDPNALASSAGRGGPAIPGSPQDFAVNVGDRVFFESDSSE 70
Query: 61 IRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
+ L WL ++ +F +EGHADE G+R + ALG RRA A Y VARGI
Sbjct: 71 LSSTAQATLDKQARWLRQYAKANFTVEGHADERGTREYNFALGARRAEAAKAYLVARGIP 130
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
A+ + SYGKE P +D +++NRRA+ L G ++
Sbjct: 131 AAGIHTISYGKERPVAVCNDISCWSQNRRAVTVLAGSQS 169
>gi|257452971|ref|ZP_05618270.1| Outer membrane protein [Fusobacterium sp. 3_1_5R]
Length = 217
Score = 87.2 bits (214), Expect = 7e-16, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+T + E S + V F + S I L+++ ++ + L++GH D
Sbjct: 90 NTAVQVQRDGENISLYLPGGVTFASDSAQISGNFYSALNSIAQVLVQYPETQILVQGHTD 149
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS ++ L RRA +V +Y + +G++++R+ +G P D NRR
Sbjct: 150 STGSFQHNMDLSNRRANSVKHYLIGQGVASNRLMSQGFGPNNPVADNSTPDGRQMNRRVE 209
Query: 151 VFL 153
+ +
Sbjct: 210 IKI 212
>gi|332188223|ref|ZP_08389951.1| peptidoglycan-associated lipoprotein [Sphingomonas sp. S17]
gi|332011722|gb|EGI53799.1| peptidoglycan-associated lipoprotein [Sphingomonas sp. S17]
Length = 174
Score = 87.2 bits (214), Expect = 7e-16, Method: Composition-based stats.
Identities = 52/175 (29%), Positives = 79/175 (45%), Gaps = 21/175 (12%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG----------- 49
M ++++ + + +I+G + P V + + +
Sbjct: 1 MTKIKTTLVVATMAL-AIAGCAKKRPAVLPPAPVDQNAGVDPNAGQATPTDGAIVPGSDA 59
Query: 50 --------DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIA 100
+++ F Y I P +L + W + + IEGH DE G+R ++A
Sbjct: 60 DFKRSVTSNTIHFGLDQYDIDPESRAILDSQAGWLMRYPNVRITIEGHCDERGTREYNLA 119
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
LG RRA A NY ARG+SA RM V SYGKE P G DE +YA+NRRA+ + G
Sbjct: 120 LGDRRANAAKNYLAARGVSADRMTVISYGKERPIALGSDEASYAQNRRAVTVVLG 174
>gi|149913202|ref|ZP_01901736.1| OmpA family domain protein [Roseobacter sp. AzwK-3b]
gi|149813608|gb|EDM73434.1| OmpA family domain protein [Roseobacter sp. AzwK-3b]
Length = 222
Score = 87.2 bits (214), Expect = 7e-16, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 52/123 (42%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHAD 90
D + ++ ++ ++ + FD S S+R L + S L + + GH D
Sbjct: 95 DDRVQITNTGDRLIVTLPQDILFDVDSASVRSGLRDDLMTVASSLRDYPDSTVQVVGHTD 154
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + L RRA AV + + G++ SR++ G+ P + A+NRR
Sbjct: 155 NTGDAGYNQQLSERRANAVADVLMDGGVAFSRIQTFGRGENQPVADNLTDAGRAQNRRVE 214
Query: 151 VFL 153
+ +
Sbjct: 215 IVI 217
>gi|146282939|ref|YP_001173092.1| ompA family protein [Pseudomonas stutzeri A1501]
gi|145571144|gb|ABP80250.1| ompA family protein [Pseudomonas stutzeri A1501]
Length = 263
Score = 87.2 bits (214), Expect = 7e-16, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 52/127 (40%), Gaps = 2/127 (1%)
Query: 34 VLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADEL 92
L S ++GD V F S + + + L L +L+ IEG++D
Sbjct: 133 SLAASETDRGLVMTLGD-VLFHPDSAELGNSANRTLLKLVHFLQLNPQRKVRIEGYSDSR 191
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
G +++ L RA V + ++ GI A R++V YG+ P A+NRR +
Sbjct: 192 GDPQANLELSRARAQTVADLLISLGIEAERVEVRGYGERFPIAENASARGRAQNRRVEIL 251
Query: 153 LKGCRAN 159
N
Sbjct: 252 FSDAAGN 258
>gi|221069812|ref|ZP_03545917.1| OmpA/MotB domain protein [Comamonas testosteroni KF-1]
gi|220714835|gb|EED70203.1| OmpA/MotB domain protein [Comamonas testosteroni KF-1]
Length = 219
Score = 87.2 bits (214), Expect = 7e-16, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 54/134 (40%), Gaps = 2/134 (1%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFL 84
+ V + Q + + FDT I+ +L + +
Sbjct: 85 EAATQGTGVGVTQTADNQLKLDIPSDISFDTGRADIKSNFAPILDRFAEGLRNNPNAEVR 144
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
I GH D GS + L L+RA + NY +RG++ +R++V G P + A
Sbjct: 145 IIGHTDSTGSDAINNPLSLQRAESTRNYLTSRGVNGARIQVQGMGSHQPVASNATNEGRA 204
Query: 145 KNRRAIVFLKGCRA 158
+NRR +F+ G RA
Sbjct: 205 RNRRVEIFV-GERA 217
>gi|260460699|ref|ZP_05808949.1| OmpA/MotB domain protein [Mesorhizobium opportunistum WSM2075]
gi|259033276|gb|EEW34537.1| OmpA/MotB domain protein [Mesorhizobium opportunistum WSM2075]
Length = 216
Score = 87.2 bits (214), Expect = 7e-16, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
T ++ + +Q ++ + F++ +++P QVL+++ + + GH D
Sbjct: 90 GTGVSVTRSGDQIILNMPSDITFNSDQDAVKPGFYQVLNSVALVLKKFKQTTVDVFGHTD 149
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + L RRA AV NY +G+ R VT +GK P + A+NRR
Sbjct: 150 STGGDQHNFDLSQRRALAVANYLAGQGVDQRRFAVTGFGKTRPVASNATSEGRAQNRRVE 209
Query: 151 VFLK 154
+ L
Sbjct: 210 IQLS 213
>gi|255530070|ref|YP_003090442.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366]
gi|255343054|gb|ACU02380.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366]
Length = 445
Score = 87.2 bits (214), Expect = 8e-16, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 57/120 (47%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
P E ++++Q + + +++ F+ +S ++ L L S L ++ ++G+A
Sbjct: 322 PLPKAPEPTVKDQSTLTGFETIQFEFNSSVLKTDSYPTLDKLSSVLRENGGKVTVKGYAS 381
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G+ ++ L RA +V Y V G++AS++ YG+ P E+ +NRR
Sbjct: 382 SEGTAAYNLKLSKDRANSVKTYLVNSGVNASQVVTKGYGEANPIASNDTEEGRIQNRRVE 441
>gi|56460671|ref|YP_155952.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Idiomarina loihiensis L2TR]
gi|56179681|gb|AAV82403.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Idiomarina loihiensis L2TR]
Length = 208
Score = 87.2 bits (214), Expect = 8e-16, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 51/124 (41%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHA 89
D+ + + + ++ F T S +I + VL ++ + LIEGH
Sbjct: 80 ADSGVKVIRDGDNLRLQLPSNITFATGSANISQSFNPVLDDVARVLKKYEKTTMLIEGHT 139
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GS + L L RA AV N V G+ + R+ YG+ MP E NRR
Sbjct: 140 DSTGSAEYNQQLSLNRANAVRNNLVGNGVDSRRVTTEGYGESMPVADNDTESGRQLNRRV 199
Query: 150 IVFL 153
+ +
Sbjct: 200 ELRI 203
>gi|317491882|ref|ZP_07950317.1| OmpA family protein [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316920316|gb|EFV41640.1| OmpA family protein [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 163
Score = 87.2 bits (214), Expect = 8e-16, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 56/146 (38%), Gaps = 4/146 (2%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNES---SLQEQFSSSVGDSVFFDTSSYSIRPADIQVL 69
+ ++ ++G + + VL E E + + + V F + ++ P + +
Sbjct: 16 LAVLFLAGCQHKGGLTAEQIAVLKEQGFHQTDEGWMFGLSEKVLFGNNKSNLTPESTETV 75
Query: 70 SNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
+G + + ++G D G + + L L+RA V + GI +
Sbjct: 76 KKMGKTLAQINILHARLDGFTDNYGDESYNQQLSLKRANTVADALSQGGIPRMNLTTRGM 135
Query: 129 GKEMPSVYGHDEDAYAKNRRAIVFLK 154
G+ P + ++NRR + ++
Sbjct: 136 GESHPIASNSTKQGRSENRRVAIVIE 161
>gi|261415986|ref|YP_003249669.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261372442|gb|ACX75187.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 700
Score = 86.8 bits (213), Expect = 8e-16, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 52/132 (39%), Gaps = 1/132 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
D + N + Q + + F T S + + + L+N+ +
Sbjct: 565 DKCPNTLVGVAVDKNGCPNKNQDLDKLKKGIQFKTGSAKLTASSNKTLNNIAKLLKKLPA 624
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ ++GH D+ GS + + +RA AV Y V +GI + R++ YG + P +
Sbjct: 625 VNLEVQGHTDDTGSEEKNKTMSEQRAQAVVKYLVKKGIDSERLRAVGYGSDKPIADNKTK 684
Query: 141 DAYAKNRRAIVF 152
NRR +
Sbjct: 685 KGRKLNRRVELV 696
>gi|156072292|gb|ABU45468.1| OmpA family protein [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|302327799|gb|ADL27000.1| OmpA family protein [Fibrobacter succinogenes subsp. succinogenes
S85]
Length = 700
Score = 86.8 bits (213), Expect = 8e-16, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 52/132 (39%), Gaps = 1/132 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
D + N + Q + + F T S + + + L+N+ +
Sbjct: 565 DKCPNTLVGVAVDKNGCPNKNQDLDKLKKGIQFKTGSAKLTASSNKTLNNIAKLLKKLPA 624
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ ++GH D+ GS + + +RA AV Y V +GI + R++ YG + P +
Sbjct: 625 VNLEVQGHTDDTGSEEKNKTMSEQRAQAVVKYLVKKGIDSERLRAVGYGSDKPIADNKTK 684
Query: 141 DAYAKNRRAIVF 152
NRR +
Sbjct: 685 KGRKLNRRVELV 696
>gi|26987958|ref|NP_743383.1| peptidoglycan-associated lipoprotein OprL [Pseudomonas putida
KT2440]
gi|148546495|ref|YP_001266597.1| peptidoglycan-associated lipoprotein [Pseudomonas putida F1]
gi|60392879|sp|P0A138|PAL_PSEPK RecName: Full=Peptidoglycan-associated lipoprotein; Flags:
Precursor
gi|60392880|sp|P0A139|PAL_PSEPU RecName: Full=Peptidoglycan-associated lipoprotein; Flags:
Precursor
gi|24982671|gb|AAN66847.1|AE016313_6 peptidoglycan-associated lipoprotein OprL [Pseudomonas putida
KT2440]
gi|663068|emb|CAA52294.1| OprL protein [Pseudomonas putida]
gi|148510553|gb|ABQ77413.1| Peptidoglycan-associated lipoprotein [Pseudomonas putida F1]
gi|313497575|gb|ADR58941.1| OprL [Pseudomonas putida BIRD-1]
Length = 166
Score = 86.8 bits (213), Expect = 8e-16, Method: Composition-based stats.
Identities = 40/135 (29%), Positives = 73/135 (54%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+ G +T + SL E+ + + +F+ S ++P ++ L L
Sbjct: 30 AGEGAAVDPNAGYGANTGAVDGSLSEEAALRAITTFYFEYDSSDLKPEAMRALDVHAKDL 89
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ + ++EG+ DE G+R ++ALG RRA AV Y V +G+S +++++ SYG+E P
Sbjct: 90 KANGNRVVLEGNTDERGTREYNMALGERRAKAVQRYLVLQGVSPAQLELVSYGEERPVAT 149
Query: 137 GHDEDAYAKNRRAIV 151
G+DE ++A+NRR +
Sbjct: 150 GNDEQSWAQNRRVEL 164
>gi|311695725|gb|ADP98598.1| OmpA/MotB domain protein [marine bacterium HP15]
Length = 269
Score = 86.8 bits (213), Expect = 8e-16, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 56/127 (44%), Gaps = 2/127 (1%)
Query: 34 VLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADEL 92
+ ++GD V FD + ++PA + L ++ E + +EG+ D
Sbjct: 140 AMQAEQTDRGMVLTLGD-VLFDLNRAELKPAGETTVGRLAEFMAEYENRRVRVEGYTDST 198
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
G+ + + L RRA AV + RGI+ +R++V +G++ P +NRR +
Sbjct: 199 GAESYNQQLSERRAEAVREALMDRGINRARIEVQGFGEQYPVATNETPAGRQQNRRVEIV 258
Query: 153 LKGCRAN 159
+ N
Sbjct: 259 ISDADGN 265
>gi|238756015|ref|ZP_04617339.1| Peptidoglycan-associated lipoprotein [Yersinia ruckeri ATCC 29473]
gi|238705740|gb|EEP98133.1| Peptidoglycan-associated lipoprotein [Yersinia ruckeri ATCC 29473]
Length = 167
Score = 86.8 bits (213), Expect = 8e-16, Method: Composition-based stats.
Identities = 51/166 (30%), Positives = 80/166 (48%), Gaps = 14/166 (8%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDT---------VLNESSLQEQFSSS 47
MQ + + + L + + + S + + S E + +
Sbjct: 1 MQLNKVLKGLMLALPVLAIAACSSNKSANNDQSGMGAGTGTESSNLSSEEQARLQMQELQ 60
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRA 106
+ V+F Y I Q+L ++L + ++EGHADE G+ +IALG RRA
Sbjct: 61 KNNIVYFGFDKYDIASDFAQMLDAHAAFLRSNPSYKVVVEGHADERGTPEYNIALGERRA 120
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
AV Y +G+SA ++ + SYGKE P+V GHDE A+AKNRRA++
Sbjct: 121 NAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAFAKNRRAVLV 166
>gi|167835831|ref|ZP_02462714.1| ompA family protein [Burkholderia thailandensis MSMB43]
Length = 215
Score = 86.8 bits (213), Expect = 8e-16, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 56/140 (40%), Gaps = 1/140 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
I N + +V SV F T+ Y++ PA +L++L + +
Sbjct: 74 AIKNKLAPSAQQTGTQVTEQPDGSLKLNVPSSVTFATNQYAVTPAFTPLLNDLATTLNQN 133
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ G+ D GS + L RA +V N R ++ASR+ G P
Sbjct: 134 PQITASVVGYTDSTGSAAYNQTLSQNRAQSVVNALSQRSVAASRLSAQGMGASNPIADNA 193
Query: 139 DEDAYAKNRRAIVFLKGCRA 158
E A+NRR ++L+ +A
Sbjct: 194 TEAGRAQNRRVEIYLRAPQA 213
>gi|115376920|ref|ZP_01464141.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
gi|310825376|ref|YP_003957734.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
gi|115366099|gb|EAU65113.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
gi|309398448|gb|ADO75907.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
Length = 374
Score = 86.8 bits (213), Expect = 8e-16, Method: Composition-based stats.
Identities = 33/123 (26%), Positives = 54/123 (43%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
L S ++ SV F + + P+ LS + L+ IEGH D
Sbjct: 236 QGELKVSEDARGTVLTLSGSVLFASGEDDLLPSARSKLSEVAEALKPTHNRLTIEGHTDA 295
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
G+ + L RRA V N+ V++G++A+R++V G+ P + A NRR +
Sbjct: 296 QGADRFNEDLSFRRAERVRNFLVSQGVAANRVEVRGLGEYRPVASNSTAEGRANNRRVEI 355
Query: 152 FLK 154
L+
Sbjct: 356 ILQ 358
>gi|114332359|ref|YP_748581.1| OmpA/MotB domain-containing protein [Nitrosomonas eutropha C91]
gi|114309373|gb|ABI60616.1| OmpA/MotB domain protein [Nitrosomonas eutropha C91]
Length = 220
Score = 86.8 bits (213), Expect = 8e-16, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 54/136 (39%), Gaps = 1/136 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFL 84
++ V+ + + ++ + FDT S I+P +L + + L
Sbjct: 83 ENATAGTGVMVSQTADNRLMLNIPSDISFDTGSAQIKPGFRPILDSFATSLLNNPGTHVT 142
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
I GH D GS + L + RA + Y RG+ R+++ G P + A
Sbjct: 143 IVGHTDNTGSDAVNNPLSVNRAASTREYLAGRGVPFQRIQIDGRGSYQPVASNNTAAGRA 202
Query: 145 KNRRAIVFLKGCRANT 160
+NRR +++ R +
Sbjct: 203 RNRRVEIYVSETRGGS 218
>gi|163738350|ref|ZP_02145765.1| OmpA/MotB [Phaeobacter gallaeciensis BS107]
gi|161388271|gb|EDQ12625.1| OmpA/MotB [Phaeobacter gallaeciensis BS107]
Length = 169
Score = 86.8 bits (213), Expect = 8e-16, Method: Composition-based stats.
Identities = 51/162 (31%), Positives = 78/162 (48%), Gaps = 9/162 (5%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISSPDTVLN--------ESSLQEQFSSSVGDSVFF 54
+ ++ +A+ + + +G DT + + S F +VGD V F
Sbjct: 4 LTKAMLVAAALGLSACAGNPWDDTAGGNGSGAGAGAGAAGQLDPSSPAYFQQTVGDRVLF 63
Query: 55 DTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYF 113
++ PA VL W D IEGHADE G+R ++ALG RRA A Y
Sbjct: 64 AVDQSTLSPAAQSVLQGQARWLTANPDYVVTIEGHADEQGTREYNLALGARRANAAREYL 123
Query: 114 VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+++G++ +R++V S+GKE P +E Y KNRRA+ L G
Sbjct: 124 LSQGVAGNRLQVVSFGKERPLEICSNEACYTKNRRAVTVLAG 165
>gi|163742233|ref|ZP_02149621.1| peptidoglycan-associated lipoprotein [Phaeobacter gallaeciensis
2.10]
gi|161384563|gb|EDQ08944.1| peptidoglycan-associated lipoprotein [Phaeobacter gallaeciensis
2.10]
Length = 169
Score = 86.8 bits (213), Expect = 8e-16, Method: Composition-based stats.
Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 9/162 (5%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISSPDTVLN--------ESSLQEQFSSSVGDSVFF 54
+ ++ +A+ + + +G DT + S F +VGD V F
Sbjct: 4 LTKAMLVAAALGLSACAGNPWDDTAGGGGSGAGAGAGAAGQLDPSSPAYFQQTVGDRVLF 63
Query: 55 DTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYF 113
++ PA VL W D IEGHADE G+R ++ALG RRA A Y
Sbjct: 64 AVDQSTLSPAAQSVLQGQARWLTANPDYVVTIEGHADEQGTREYNLALGARRANAAREYL 123
Query: 114 VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+++G++ +R++V S+GKE P +E Y KNRRA+ L G
Sbjct: 124 LSQGVAGNRLQVVSFGKERPLEICSNEACYTKNRRAVTVLAG 165
>gi|195953009|ref|YP_002121299.1| OmpA/MotB domain protein [Hydrogenobaculum sp. Y04AAS1]
gi|195932621|gb|ACG57321.1| OmpA/MotB domain protein [Hydrogenobaculum sp. Y04AAS1]
Length = 271
Score = 86.8 bits (213), Expect = 8e-16, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 53/137 (38%), Gaps = 4/137 (2%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
K + + + + D+V F + S I P +L ++ + I+
Sbjct: 99 KKQGLEGKFKVKLVPQGIKLILQDTVLFKSGSADIDPKYYSLLDSIYKIISSLPNPIEID 158
Query: 87 GHADELG----SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
G D + S+ L RA +V YF+ +G S++K+ YGK P V
Sbjct: 159 GFTDNTPIHTLTFPSNWELSTDRAASVAKYFIFKGFDPSKIKIAGYGKYHPLVPNTTPQN 218
Query: 143 YAKNRRAIVFLKGCRAN 159
A NRR + + + +
Sbjct: 219 KAMNRRVEITILNIKGS 235
>gi|330861523|emb|CBX71733.1| putative lipoprotein yfiB [Yersinia enterocolitica W22703]
Length = 169
Score = 86.8 bits (213), Expect = 8e-16, Method: Composition-based stats.
Identities = 30/158 (18%), Positives = 63/158 (39%), Gaps = 6/158 (3%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESS-----LQEQFSSSVGDSVFFDT 56
Q + ++I A+ ++ + G + +P+ + + + + V FD+
Sbjct: 9 QKNPLWISFFALCLLVLVGCQAKPHQGLTPEQIAALQEQGFKLTDNGWVFGLTNKVLFDS 68
Query: 57 SSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA 115
+ + +Q + N+G ++G+ D +G + L +RA AV + A
Sbjct: 69 DVRKLNASGVQTVQNIGRALHNVGINHMRVDGYTDAIGEDGYNQQLSFQRASAVADTLAA 128
Query: 116 RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
GI + ++V GK P A+NRR + +
Sbjct: 129 IGIPRANIEVRGRGKLEPVADNRTAKGRAENRRVAIIV 166
>gi|162454304|ref|YP_001616671.1| OmpA family outer membrane protein [Sorangium cellulosum 'So ce
56']
gi|161164886|emb|CAN96191.1| putative OmpA family outer membrane protein [Sorangium cellulosum
'So ce 56']
Length = 488
Score = 86.8 bits (213), Expect = 8e-16, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 61/139 (43%), Gaps = 6/139 (4%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+I+G+++ D + + EQ + D++ F T S + + L + +
Sbjct: 352 TINGVEDDDGCPDKGEPRVA----YEQGEFVIRDTIRFRTGSAELEQDSYRTLDQVALVM 407
Query: 77 EKHDC--DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
+ + +EGH DE G+ + L +RA V Y + +G+S R+ +G + P
Sbjct: 408 KANPEIERLRVEGHTDETGTPELNQELSEQRAETVRKYLIRKGVSPGRLTAEGFGSDRPV 467
Query: 135 VYGHDEDAYAKNRRAIVFL 153
G D + AKNRR +
Sbjct: 468 AEGTDPASLAKNRRVEFVI 486
>gi|254181403|ref|ZP_04888000.1| ompA family protein [Burkholderia pseudomallei 1655]
gi|184211941|gb|EDU08984.1| ompA family protein [Burkholderia pseudomallei 1655]
Length = 215
Score = 86.8 bits (213), Expect = 8e-16, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 56/140 (40%), Gaps = 1/140 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
I N + +V SV F T Y+I PA +L++L + +
Sbjct: 74 AIKNKLAPSAQQTGTQVTEQPDGSLKLNVPSSVTFATDQYAITPAFTLLLNDLATTLNQN 133
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ G+ D GS + L RA +V N RG++A+R+ G P
Sbjct: 134 PQITASVVGYTDSTGSAAHNQTLSQNRAQSVVNALAQRGVAANRLSAQGMGASNPIADNA 193
Query: 139 DEDAYAKNRRAIVFLKGCRA 158
E A+NRR ++L+ +A
Sbjct: 194 TEAGRAQNRRVEIYLRAPQA 213
>gi|222150201|ref|YP_002551158.1| porin [Agrobacterium vitis S4]
gi|221737183|gb|ACM38146.1| porin [Agrobacterium vitis S4]
Length = 221
Score = 86.8 bits (213), Expect = 8e-16, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 56/139 (40%), Gaps = 1/139 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ + T ++ + ++ ++ ++ F T + P L+++ L+K +
Sbjct: 83 QEAELRAQLQGTGVSVTRQGDRIILNMPSNITFPTDQDQVLPPFYPTLNSVAIVLKKFNR 142
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ GH D G + L RRA +V NY ++G+ RM +G P
Sbjct: 143 TLVDVNGHTDSTGGLQHNQDLSQRRAESVLNYLGSQGVDPRRMSAMGFGPSQPIATNATP 202
Query: 141 DAYAKNRRAIVFLKGCRAN 159
A+NRR V + + N
Sbjct: 203 QGRAQNRRVEVAISPLKDN 221
>gi|319952835|ref|YP_004164102.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
gi|319421495|gb|ADV48604.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
Length = 448
Score = 86.8 bits (213), Expect = 9e-16, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 61/136 (44%), Gaps = 6/136 (4%)
Query: 22 DNLDTKISSPDTVLN-----ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
D D TV N ++ ++ + ++ FDT SI+ A V+ ++ + L
Sbjct: 309 DKDDMCPDVAGTVANKGCPEVTAEVQKQLNDYARTILFDTGKSSIKAASTSVMVDIITIL 368
Query: 77 EKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+++ F +EGH D +GS + +L RA +V + V +GI R+ YG+E P
Sbjct: 369 KEYPNAKFTVEGHTDSVGSAKLNQSLSESRALSVKEFLVEKGIEEFRLSAIGYGEEKPIA 428
Query: 136 YGHDEDAYAKNRRAIV 151
+NRR +
Sbjct: 429 SNSTRAGRTQNRRVEI 444
>gi|315918088|ref|ZP_07914328.1| outer membrane porin F [Fusobacterium gonidiaformans ATCC 25563]
gi|317058194|ref|ZP_07922679.1| outer membrane porin F [Fusobacterium sp. 3_1_5R]
gi|313683870|gb|EFS20705.1| outer membrane porin F [Fusobacterium sp. 3_1_5R]
gi|313691963|gb|EFS28798.1| outer membrane porin F [Fusobacterium gonidiaformans ATCC 25563]
Length = 189
Score = 86.8 bits (213), Expect = 9e-16, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 67/179 (37%), Gaps = 26/179 (14%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQ-------------------- 41
+Y I ++L++ ++ N + S + N +
Sbjct: 9 KYLGITLLLASFVFVACGKTSNTSIRDLSTEGNQNFAIEDIDAAKKPLEDIIVFNQDGVT 68
Query: 42 -----EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
S+ + + FD + Y ++ L L + D I+G+ D +GS
Sbjct: 69 IRREGNNLILSMPELILFDFNKYEVKNGIKPSLRTLANALGANADIKIKIDGYTDFIGSE 128
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
++ L + RA A+ +Y VA+G + + + YGK+ P E A+NRR +
Sbjct: 129 GYNLELSVNRAKAIKSYLVAQGAIENNISIEGYGKQNPVASNDTESGRARNRRVEFIIS 187
>gi|312962474|ref|ZP_07776965.1| Outer membrane porin F [Pseudomonas fluorescens WH6]
gi|311283401|gb|EFQ61991.1| Outer membrane porin F [Pseudomonas fluorescens WH6]
Length = 326
Score = 86.8 bits (213), Expect = 9e-16, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 1/112 (0%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALG 102
V V FD ++P + NL ++ + + + GH D +G + L
Sbjct: 211 QVVRVELDVKFDFDKAVVKPNSYGDVKNLADFMAQYPATNVEVAGHTDSVGPDAYNQKLS 270
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RRA AV V G++ SR+ YG+ P E A NRR ++
Sbjct: 271 QRRADAVKQVLVKDGVAPSRVTAVGYGESRPVADNATEAGRAVNRRVEASVE 322
>gi|262277489|ref|ZP_06055282.1| OmpA family protein [alpha proteobacterium HIMB114]
gi|262224592|gb|EEY75051.1| OmpA family protein [alpha proteobacterium HIMB114]
Length = 155
Score = 86.8 bits (213), Expect = 9e-16, Method: Composition-based stats.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 3/151 (1%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSI 61
++ ++S S + + + ++ V D VFF T+ +
Sbjct: 5 NIRNFALVAVLGFLVSACATGGKK---RSANDWYTGTDTVKFLAAGVPDRVFFATNKSGL 61
Query: 62 RPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS 121
A L+ ++++ ++EGHADE G+R ++ALG RRA AV +Y +++G+S S
Sbjct: 62 HTASKSTLNKQAAYIKSSGISVVVEGHADERGTREYNLALGERRANAVRDYLMSQGVSGS 121
Query: 122 RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ V SYGKE P A+++NRR++
Sbjct: 122 NVTVISYGKERPVNPESSRLAWSQNRRSVTV 152
>gi|254227754|ref|ZP_04921185.1| outer membrane protein OmpA [Vibrio sp. Ex25]
gi|262395797|ref|YP_003287650.1| outer membrane protein A precursor [Vibrio sp. Ex25]
gi|151939796|gb|EDN58623.1| outer membrane protein OmpA [Vibrio sp. Ex25]
gi|262339391|gb|ACY53185.1| outer membrane protein A precursor [Vibrio sp. Ex25]
Length = 330
Score = 86.8 bits (213), Expect = 9e-16, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 1/101 (0%)
Query: 54 FDTSSYSIRPADIQVL-SNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F+ S + + + L + + E I G+ D G + L RRA +V +Y
Sbjct: 218 FEFDSAKLTESVSERLDNFVSFLNEYPQAQVEITGYTDSSGPATYNQKLSERRAQSVADY 277
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
A GI + R+ V G+E P + KNRR V +
Sbjct: 278 LTAAGIDSDRLTVKGMGEENPVADNSTREGREKNRRVEVVV 318
>gi|152986735|ref|YP_001350031.1| hypothetical protein PSPA7_4687 [Pseudomonas aeruginosa PA7]
gi|150961893|gb|ABR83918.1| lipoprotein, putative [Pseudomonas aeruginosa PA7]
Length = 237
Score = 86.8 bits (213), Expect = 9e-16, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHAD 90
T + + + ++ F T S +I P+ L+NL + +++ I G+ D
Sbjct: 99 GTGVEVQRQGDDIKLIMPGNITFATDSANIAPSFYAPLNNLANSFKQYNQNTIEIVGYTD 158
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GSR ++ L RRA +V Y A+G+ +R+ G + P D A+NRR
Sbjct: 159 STGSRQHNMDLSQRRAQSVAGYLTAQGVDGTRLSTRGMGPDQPIASNSTADGRAQNRRVE 218
Query: 151 VFLK 154
V L+
Sbjct: 219 VNLR 222
>gi|585710|sp|P37726|PORF_PSEFL RecName: Full=Outer membrane porin F; AltName: Full=Root adhesin;
Flags: Precursor
gi|5668610|gb|AAD45981.1| OprF [Pseudomonas fluorescens]
Length = 326
Score = 86.8 bits (213), Expect = 9e-16, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 44/112 (39%), Gaps = 1/112 (0%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALG 102
V V FD ++P + NL ++ + + + GH D +G + L
Sbjct: 211 QVVRVELDVKFDFDKSVVKPNSYGDVKNLADFMAQYPATNVEVAGHTDSIGPDAYNQKLS 270
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RRA V V G++ SR+ YG+ P E A NRR ++
Sbjct: 271 QRRADRVKQVLVKDGVAPSRITAVGYGESRPVADNATEAGRAVNRRVEASVE 322
>gi|225873103|ref|YP_002754562.1| ompA family protein [Acidobacterium capsulatum ATCC 51196]
gi|225791640|gb|ACO31730.1| ompA family protein [Acidobacterium capsulatum ATCC 51196]
Length = 508
Score = 86.8 bits (213), Expect = 9e-16, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 2/133 (1%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEG 87
+ VL ++ D VF T SY I+ + L+ + + +EG
Sbjct: 351 QQLNAVLATRESARGLIVNMSDVVF-ATGSYQIKTSAQIKLARIAGILMTYPGLKVQVEG 409
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+ D +GS + L +RA AV + +++G+ A+ + YG+ P + AKNR
Sbjct: 410 YTDNVGSAAFNQKLSNQRANAVMKFLISQGVKANSISAKGYGEADPVASNNTVAGRAKNR 469
Query: 148 RAIVFLKGCRANT 160
R + + G T
Sbjct: 470 RVQLVVSGAAIGT 482
>gi|49081952|gb|AAT50376.1| PA0833 [synthetic construct]
Length = 238
Score = 86.8 bits (213), Expect = 9e-16, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHAD 90
T + + + ++ F T S +I P+ L+NL + +++ I G+ D
Sbjct: 99 GTGVEVQRQGDDIKLIMPGNITFATDSANIAPSFYAPLNNLANSFKQYNQNTIEIVGYTD 158
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GSR ++ L RRA +V Y A+G+ +R+ G + P D A+NRR
Sbjct: 159 STGSRQHNMDLSQRRAQSVAGYLTAQGVDGTRLSTRGMGPDQPIASNSTADGRAQNRRVE 218
Query: 151 VFLK 154
V L+
Sbjct: 219 VNLR 222
>gi|327481279|gb|AEA84589.1| ompA family protein [Pseudomonas stutzeri DSM 4166]
Length = 265
Score = 86.8 bits (213), Expect = 9e-16, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 52/127 (40%), Gaps = 2/127 (1%)
Query: 34 VLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADEL 92
L S ++GD V F S + + + L L +L+ IEG++D
Sbjct: 135 SLAASETDRGLVMTLGD-VLFHPDSAELGNSANRTLLKLVHFLQLNPQRKVRIEGYSDSR 193
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
G +++ L RA V + ++ GI A R++V YG+ P A+NRR +
Sbjct: 194 GDPQANLELSRARAQTVADLLISLGIEAERVEVRGYGERFPIAENASARGRAQNRRVEIL 253
Query: 153 LKGCRAN 159
N
Sbjct: 254 FSDAAGN 260
>gi|317059511|ref|ZP_07923996.1| outer membrane protein [Fusobacterium sp. 3_1_5R]
gi|313685187|gb|EFS22022.1| outer membrane protein [Fusobacterium sp. 3_1_5R]
Length = 204
Score = 86.8 bits (213), Expect = 9e-16, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+T + E S + V F + S I L+++ ++ + L++GH D
Sbjct: 77 NTAVQVQRDGENISLYLPGGVTFASDSAQISGNFYSALNSIAQVLVQYPETQILVQGHTD 136
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS ++ L RRA +V +Y + +G++++R+ +G P D NRR
Sbjct: 137 STGSFQHNMDLSNRRANSVKHYLIGQGVASNRLMSQGFGPNNPVADNSTPDGRQMNRRVE 196
Query: 151 VFL 153
+ +
Sbjct: 197 IKI 199
>gi|299066021|emb|CBJ37202.1| putative outer membrane lipoprotein [Ralstonia solanacearum CMR15]
Length = 209
Score = 86.8 bits (213), Expect = 9e-16, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 60/140 (42%), Gaps = 1/140 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
I + T ++ ++ V FDT S I+P+ L ++ +
Sbjct: 70 AIKSKLTGDTAGTGTQISEQPDGSLKLNIPSQVSFDTDSAVIKPSFRGPLDSVAETLSQH 129
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ + GH D G+ N +++L RRA +V +Y RG++ +R+ G+ P
Sbjct: 130 PELAANVVGHTDSTGNPNYNMSLSQRRAQSVASYLTDRGVARTRLSAEGRGQTQPVGDNA 189
Query: 139 DEDAYAKNRRAIVFLKGCRA 158
E A+NRR ++LK +
Sbjct: 190 TEAGRAQNRRVEIYLKPIQG 209
>gi|296390816|ref|ZP_06880291.1| hypothetical protein PaerPAb_21793 [Pseudomonas aeruginosa PAb1]
Length = 237
Score = 86.8 bits (213), Expect = 9e-16, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHAD 90
T + + + ++ F T S +I P+ L+NL + +++ I G+ D
Sbjct: 99 GTGVEVQRQGDDIKLIMPGNITFATDSANIAPSFYAPLNNLANSFKQYNQNTIEIVGYTD 158
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GSR ++ L RRA +V Y A+G+ +R+ G + P D A+NRR
Sbjct: 159 STGSRQHNMDLSQRRAQSVAGYLTAQGVDGTRLSTRGMGPDQPIASNSTADGRAQNRRVE 218
Query: 151 VFLK 154
V L+
Sbjct: 219 VNLR 222
>gi|15596030|ref|NP_249524.1| hypothetical protein PA0833 [Pseudomonas aeruginosa PAO1]
gi|107100290|ref|ZP_01364208.1| hypothetical protein PaerPA_01001315 [Pseudomonas aeruginosa PACS2]
gi|116048755|ref|YP_792445.1| hypothetical protein PA14_53500 [Pseudomonas aeruginosa UCBPP-PA14]
gi|254239185|ref|ZP_04932508.1| hypothetical protein PACG_05376 [Pseudomonas aeruginosa C3719]
gi|254245120|ref|ZP_04938442.1| hypothetical protein PA2G_06007 [Pseudomonas aeruginosa 2192]
gi|313105709|ref|ZP_07791972.1| hypothetical protein PA39016_000110006 [Pseudomonas aeruginosa
39016]
gi|9946728|gb|AAG04222.1|AE004518_3 hypothetical protein PA0833 [Pseudomonas aeruginosa PAO1]
gi|115583976|gb|ABJ09991.1| hypothetical protein PA14_53500 [Pseudomonas aeruginosa UCBPP-PA14]
gi|126171116|gb|EAZ56627.1| hypothetical protein PACG_05376 [Pseudomonas aeruginosa C3719]
gi|126198498|gb|EAZ62561.1| hypothetical protein PA2G_06007 [Pseudomonas aeruginosa 2192]
gi|310878474|gb|EFQ37068.1| hypothetical protein PA39016_000110006 [Pseudomonas aeruginosa
39016]
Length = 237
Score = 86.8 bits (213), Expect = 9e-16, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHAD 90
T + + + ++ F T S +I P+ L+NL + +++ I G+ D
Sbjct: 99 GTGVEVQRQGDDIKLIMPGNITFATDSANIAPSFYAPLNNLANSFKQYNQNTIEIVGYTD 158
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GSR ++ L RRA +V Y A+G+ +R+ G + P D A+NRR
Sbjct: 159 STGSRQHNMDLSQRRAQSVAGYLTAQGVDGTRLSTRGMGPDQPIASNSTADGRAQNRRVE 218
Query: 151 VFLK 154
V L+
Sbjct: 219 VNLR 222
>gi|260494612|ref|ZP_05814742.1| OmpA family membrane protein [Fusobacterium sp. 3_1_33]
gi|260197774|gb|EEW95291.1| OmpA family membrane protein [Fusobacterium sp. 3_1_33]
Length = 396
Score = 86.8 bits (213), Expect = 9e-16, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALG 102
++ + FD Y +RP +VL NL L++ D F I+GH D + L
Sbjct: 284 LLITLDSGILFDVDKYDVRPEAEEVLKNLAIVLKEADIKAFEIDGHTDSDAGDKHNQILS 343
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA AV N+ ++GI+A + + YGK P + KNRR + +
Sbjct: 344 ENRANAVKNFLTSQGITAE-ITIKGYGKTRPIASNDTPEGKQKNRRVEIVI 393
>gi|104780902|ref|YP_607400.1| outer membrane protein OprF [Pseudomonas entomophila L48]
gi|95109889|emb|CAK14594.1| outer membrane protein OprF [Pseudomonas entomophila L48]
Length = 346
Score = 86.8 bits (213), Expect = 9e-16, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 56/138 (40%), Gaps = 4/138 (2%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD ++P + NL ++++
Sbjct: 205 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYADIKNLADFMKQ 264
Query: 79 H-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVY 136
+ +EGH D +G + L RRA AV + + + + R+ YG+ P
Sbjct: 265 YPQTTTTVEGHTDSVGPDAYNQKLSERRAKAVKDVLTQQYGVESGRVSSVGYGETRPVAD 324
Query: 137 GHDEDAYAKNRRAIVFLK 154
E A NRR ++
Sbjct: 325 NATEAGRAVNRRVEAQVE 342
>gi|58581150|ref|YP_200166.1| OmpA family protein [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84623073|ref|YP_450445.1| OmpA family protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|58425744|gb|AAW74781.1| OmpA family protein [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84367013|dbj|BAE68171.1| OmpA family protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 241
Score = 86.8 bits (213), Expect = 9e-16, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 1/130 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGH 88
+ +T + + S ++ D + FD +++P L+ + S E + + GH
Sbjct: 102 TANTGIEVQRQGDNISLNLPDGITFDFGKSALKPEFYTALNGVASTLREYNQTMVEVVGH 161
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D +GS ++ L RA AV Y A+G+ RM+ GK P + + AKNRR
Sbjct: 162 TDSVGSDAANQRLSEERAGAVAQYLTAQGVQRERMETMGAGKRYPIADNNTDAGRAKNRR 221
Query: 149 AIVFLKGCRA 158
+ L RA
Sbjct: 222 VEIRLIPLRA 231
>gi|264680876|ref|YP_003280786.1| OmpA/MotB [Comamonas testosteroni CNB-2]
gi|299531878|ref|ZP_07045278.1| OmpA/MotB [Comamonas testosteroni S44]
gi|262211392|gb|ACY35490.1| OmpA/MotB [Comamonas testosteroni CNB-2]
gi|298720053|gb|EFI61010.1| OmpA/MotB [Comamonas testosteroni S44]
Length = 219
Score = 86.8 bits (213), Expect = 9e-16, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 54/134 (40%), Gaps = 2/134 (1%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFL 84
+ V + Q + + FDT I+ +L + +
Sbjct: 85 EAATQGTGVGVTQTADNQLKLDIPSDISFDTGRADIKGNFAPILDRFAEGLRNNPNAEVR 144
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
I GH D GS + L L+RA + NY +RG++ +R++V G P + A
Sbjct: 145 IIGHTDSTGSDAINNPLSLQRAESTRNYLTSRGVNGARIQVQGMGSHQPVASNATNEGRA 204
Query: 145 KNRRAIVFLKGCRA 158
+NRR +F+ G RA
Sbjct: 205 RNRRVEIFV-GERA 217
>gi|89900364|ref|YP_522835.1| OmpA/MotB [Rhodoferax ferrireducens T118]
gi|89345101|gb|ABD69304.1| OmpA/MotB [Rhodoferax ferrireducens T118]
Length = 212
Score = 86.8 bits (213), Expect = 9e-16, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FFD ++P L +L ++ + + +I GH D +GS + L +R
Sbjct: 99 VTYAADAFFDFDKSVLKPEGKAKLDDLVGKVKDINLEVIIAVGHTDSVGSNAYNQKLSVR 158
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
R+ AV Y V++GI +R+ G+ P ++ AKNRR + + G R
Sbjct: 159 RSEAVKAYLVSKGIEKNRVYTEGKGELQPVADNKTKEGRAKNRRVEIEVVGTR 211
>gi|326388398|ref|ZP_08209994.1| OmpA/MotB [Novosphingobium nitrogenifigens DSM 19370]
gi|326207130|gb|EGD57951.1| OmpA/MotB [Novosphingobium nitrogenifigens DSM 19370]
Length = 172
Score = 86.8 bits (213), Expect = 9e-16, Method: Composition-based stats.
Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 16/169 (9%)
Query: 2 QYSTIFIILSAITMMSISGIDN--------------LDTKISSPDTVLNESSLQEQFSSS 47
+ T ++L+++ + +G + S + +S
Sbjct: 4 KILTASVVLASLALAGCAGKPKELPPQPEAATTTRTPPPPPTPAPAGPVPGSQADFLASV 63
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
+ D++ F+ Y++ +L + W + IEGH DE G+R ++ALG RRA
Sbjct: 64 ISDTIHFELDKYNVDTESQGILQSQAQWLAKYPGKKITIEGHCDERGTREYNLALGERRA 123
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR-AIVFLK 154
A Y V G+ ASR+ SYGKE P G DE ++AKNRR + ++
Sbjct: 124 NAAKTYLVGLGVDASRINTVSYGKERPIALGSDEASWAKNRRAVTITVE 172
>gi|296445979|ref|ZP_06887929.1| peptidoglycan-associated lipoprotein [Methylosinus trichosporium
OB3b]
gi|296256497|gb|EFH03574.1| peptidoglycan-associated lipoprotein [Methylosinus trichosporium
OB3b]
Length = 167
Score = 86.8 bits (213), Expect = 9e-16, Method: Composition-based stats.
Identities = 48/158 (30%), Positives = 80/158 (50%), Gaps = 2/158 (1%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISSPD-TVLNESSLQEQFSSSVGDSVFFDTSSYSI 61
+ + +A+++ + + + D + + F +VGD ++F+T S +
Sbjct: 10 LRVVAALTAALSIAACAKNASEDENAALAGRGGYAAPGSPQDFVVNVGDRIYFETDSSEL 69
Query: 62 RPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA 120
L WL+++ F +EGHADE G+R + ALG RRA NY V+RG+SA
Sbjct: 70 TSTAQTTLDKQVDWLQRYGRYSFTVEGHADERGTREYNFALGARRAEVAKNYLVSRGLSA 129
Query: 121 SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
+R++ SYGKE P D +++NRRA+ L G +
Sbjct: 130 ARIRTISYGKERPVAVCDDISCWSQNRRAVTVLGGGNS 167
>gi|27382260|ref|NP_773789.1| peptidoglycan-associated lipoprotein [Bradyrhizobium japonicum USDA
110]
gi|27355431|dbj|BAC52414.1| peptidoglycan-associated lipoprotein [Bradyrhizobium japonicum USDA
110]
Length = 162
Score = 86.8 bits (213), Expect = 9e-16, Method: Composition-based stats.
Identities = 51/151 (33%), Positives = 75/151 (49%), Gaps = 4/151 (2%)
Query: 4 STIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRP 63
+ +L+ M + Q+ F +VGD VFF++ + P
Sbjct: 11 LKLAAVLAVALSMGACA---NKNSAADAMANAATPGSQQDFVVNVGDRVFFESDQTDLTP 67
Query: 64 ADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASR 122
I L WL+ + F IEGHADE G+R +IALG RRA +V ++ +RGI A+R
Sbjct: 68 QAIVTLEKQAQWLQTYPRYSFTIEGHADERGTREYNIALGARRAQSVRSFLASRGIDANR 127
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
M+ SYGKE P +D +++NRRA+ L
Sbjct: 128 MRTISYGKERPVAVCNDISCWSQNRRAVTVL 158
>gi|78356732|ref|YP_388181.1| OmpA family protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78219137|gb|ABB38486.1| OmpA family protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 352
Score = 86.8 bits (213), Expect = 9e-16, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 49/131 (37%), Gaps = 1/131 (0%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-F 83
DT+ E V SV F S I VL+ + +E+H
Sbjct: 222 DTREVKKAPAPAPVVTPETEEVIVLRSVQFAFDSAEISNEAEDVLTEAATLIEEHAGKQV 281
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
+ GH D G + L RRA +V + G+ A+R+K +G+ P + +
Sbjct: 282 TLAGHTDSTGPEAYNQKLSQRRAESVKAFLAKEGVDANRIKAVGFGESEPKFDNNTAEGR 341
Query: 144 AKNRRAIVFLK 154
NRR + K
Sbjct: 342 KLNRRVEITFK 352
>gi|187929665|ref|YP_001900152.1| OmpA/MotB domain-containing protein [Ralstonia pickettii 12J]
gi|309781567|ref|ZP_07676302.1| inner membrane lipoprotein YiaD [Ralstonia sp. 5_7_47FAA]
gi|187726555|gb|ACD27720.1| OmpA/MotB domain protein [Ralstonia pickettii 12J]
gi|308919672|gb|EFP65334.1| inner membrane lipoprotein YiaD [Ralstonia sp. 5_7_47FAA]
Length = 209
Score = 86.8 bits (213), Expect = 9e-16, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 58/140 (41%), Gaps = 1/140 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
I + ++ ++ V FDT S I+P+ L ++ +
Sbjct: 70 AIKSKLAGDTAGTGTQISEQPDGSLKLNIPSQVSFDTDSAVIKPSFRGPLDSVAQTLTQH 129
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ + GH D G+ N ++ L +RA +V +Y RG++ +R+ G+ P
Sbjct: 130 PELAANVVGHTDSTGNPNYNLTLSQKRAQSVASYLTDRGVARNRLSAEGRGQNQPVADNA 189
Query: 139 DEDAYAKNRRAIVFLKGCRA 158
E A+NRR ++LK +
Sbjct: 190 TEAGRAQNRRVEIYLKPIQG 209
>gi|85374727|ref|YP_458789.1| hypothetical protein ELI_09500 [Erythrobacter litoralis HTCC2594]
gi|84787810|gb|ABC63992.1| hypothetical protein ELI_09500 [Erythrobacter litoralis HTCC2594]
Length = 170
Score = 86.8 bits (213), Expect = 9e-16, Method: Composition-based stats.
Identities = 50/168 (29%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 1 MQYS-TIFIILSAITMMSISGIDNLDTKISSPDTVLNES-----------SLQEQFSSSV 48
M ++L+ ++ D P V QE F +V
Sbjct: 1 MNTKFAAVMMLAGTASLAACKTTAPDELPPDPGPVATAPTTPTTPAGPAVGTQEHFVRAV 60
Query: 49 G--DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRR 105
+ ++FDT ++I AD L + + + IEGHADE G+R+ ++ALG RR
Sbjct: 61 NGQNIIYFDTDRFNIDSADAAALQTQAQYLSQYPNVTVTIEGHADERGTRDYNLALGERR 120
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
A A NY V+ GI A+R+ SYG+E P +A+A+NRRA+ +
Sbjct: 121 ANAAKNYLVSLGIPATRISTVSYGEERPVATASTPEAWAQNRRAVTVV 168
>gi|23015570|ref|ZP_00055342.1| COG2885: Outer membrane protein and related
peptidoglycan-associated (lipo)proteins
[Magnetospirillum magnetotacticum MS-1]
Length = 161
Score = 86.8 bits (213), Expect = 9e-16, Method: Composition-based stats.
Identities = 51/160 (31%), Positives = 82/160 (51%), Gaps = 7/160 (4%)
Query: 1 MQYSTIFIILSAITMMSI------SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFF 54
M+ + I+ +A + + + + P + +E F ++VGD VFF
Sbjct: 1 MKLRFLTIVAAAALLAACESAPSDTANKGGTGITTPPASSGIVKGSKEDFVANVGDRVFF 60
Query: 55 DTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYF 113
D S+R L +WL+ + +EGHADE G+R ++ALG +RA +V Y
Sbjct: 61 DFDKSSLRADAKATLDKQAAWLKAYPNYSLTVEGHADERGTREYNLALGEKRANSVAEYL 120
Query: 114 VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
A G++A+R+K SYGKE P G +E A+++NRR + L
Sbjct: 121 KAAGVAAARVKTVSYGKERPVALGSNEAAWSQNRRGVTVL 160
>gi|209550775|ref|YP_002282692.1| peptidoglycan-associated lipoprotein [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209536531|gb|ACI56466.1| peptidoglycan-associated lipoprotein [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 177
Score = 86.8 bits (213), Expect = 9e-16, Method: Composition-based stats.
Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 7/156 (4%)
Query: 8 IILSAITMMSISGIDNLDTKIS------SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSI 61
++++ + ++++ + + + F+ +VGD +FFDT S SI
Sbjct: 20 VMIALVAGLALASCAKKNGGMPNSAGDIGLGGGAATPGSAQDFTVNVGDRIFFDTDSSSI 79
Query: 62 RPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA 120
R Q L W + +EGHADE G+R ++ALG RRA A +Y +RG+ A
Sbjct: 80 RADASQTLDRQAQWLARYPNYQITVEGHADERGTREYNLALGARRAAAAKDYLASRGVPA 139
Query: 121 SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
R+K SYGKE P D +++NRRA+ L G
Sbjct: 140 QRLKTISYGKERPVAVCDDISCWSQNRRAVTVLGGA 175
>gi|50120313|ref|YP_049480.1| peptidoglycan-associated outer membrane lipoprotein [Pectobacterium
atrosepticum SCRI1043]
gi|49610839|emb|CAG74284.1| peptidoglycan-associated lipoprotein precursor [Pectobacterium
atrosepticum SCRI1043]
Length = 169
Score = 86.8 bits (213), Expect = 9e-16, Method: Composition-based stats.
Identities = 54/168 (32%), Positives = 82/168 (48%), Gaps = 16/168 (9%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDT-----------VLNESSLQEQFS 45
MQ++ + + L + + + S N D SS +E + +
Sbjct: 1 MQFNKVLKGLMLALPVLAVAACSSNKNADNDQSSMGAGNNGMMDGGNASSSEQARLQMQE 60
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLR 104
+ V+F Y + Q+L ++L + IEGHADE G+ +IALG R
Sbjct: 61 LQRNNIVYFGLDKYDVSSEFAQMLDAHAAFLRSNPSYKVTIEGHADERGTPEYNIALGER 120
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
RA AV Y +G+S+ ++ + SYGKE P+V GHDE AYAKNRRA++
Sbjct: 121 RANAVQMYLQGKGVSSDQISIVSYGKEKPAVLGHDEAAYAKNRRAVLV 168
>gi|182678181|ref|YP_001832327.1| OmpA/MotB domain-containing protein [Beijerinckia indica subsp.
indica ATCC 9039]
gi|182634064|gb|ACB94838.1| OmpA/MotB domain protein [Beijerinckia indica subsp. indica ATCC
9039]
Length = 459
Score = 86.8 bits (213), Expect = 9e-16, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 2/136 (1%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVG-DSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
D + D ++ S Q + +G ++ F+T+ +I + +L + + +
Sbjct: 324 TDTSAITVHPEDKAVDSKSCQAELDGLLGKATILFETNGATISKSSEGLLDRIVTTIGHC 383
Query: 80 D-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
I GH D G+ ++AL RRA AVF+Y VA GI A ++ T YG P
Sbjct: 384 PEATIEISGHTDSTGNEPFNLALSERRAKAVFDYLVAAGIPADKLSATGYGSSRPVASND 443
Query: 139 DEDAYAKNRRAIVFLK 154
E+ AKNRR +K
Sbjct: 444 TEEGRAKNRRIEFTVK 459
>gi|308274998|emb|CBX31597.1| hypothetical protein N47_E51090 [uncultured Desulfobacterium sp.]
Length = 315
Score = 86.8 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 2/157 (1%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ + S + ++ + L ++GD V F + +
Sbjct: 155 MKKLELAKQESQAMSLEAEQARKKAAELKAEIDKLQAKQTDRGIVLTLGD-VLFANNKAN 213
Query: 61 IRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
++P ++ + L +L+KH +IEGH D GS ++ L RRA AV + VARGI
Sbjct: 214 LQPGAMRTIDQLAEFLKKHAERMVVIEGHTDSRGSDTYNLGLSQRRADAVRDALVARGID 273
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
+R++ G+ P +NRR + +
Sbjct: 274 QARIQTIGKGEVYPVASNDTSAGRQQNRRVEIIISNT 310
>gi|257451630|ref|ZP_05616929.1| Outer membrane porin F [Fusobacterium sp. 3_1_5R]
gi|257466946|ref|ZP_05631257.1| Outer membrane porin F [Fusobacterium gonidiaformans ATCC 25563]
Length = 183
Score = 86.8 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 67/179 (37%), Gaps = 26/179 (14%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQ-------------------- 41
+Y I ++L++ ++ N + S + N +
Sbjct: 3 KYLGITLLLASFVFVACGKTSNTSIRDLSTEGNQNFAIEDIDAAKKPLEDIIVFNQDGVT 62
Query: 42 -----EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
S+ + + FD + Y ++ L L + D I+G+ D +GS
Sbjct: 63 IRREGNNLILSMPELILFDFNKYEVKNGIKPSLRTLANALGANADIKIKIDGYTDFIGSE 122
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
++ L + RA A+ +Y VA+G + + + YGK+ P E A+NRR +
Sbjct: 123 GYNLELSVNRAKAIKSYLVAQGAIENNISIEGYGKQNPVASNDTESGRARNRRVEFIIS 181
>gi|170703075|ref|ZP_02893898.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
gi|170132016|gb|EDT00521.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
Length = 215
Score = 86.8 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 55/136 (40%), Gaps = 1/136 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
I N ++ +V SV F T+ Y+I PA +L++L + +
Sbjct: 74 AIKNKLAPSAAQTGTQVTEQPDGSLKLNVPSSVTFATNQYAITPAFTPLLNDLATTLNQN 133
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ G+ D GS + L RA +V N V RG++ R+ G P
Sbjct: 134 PQLTASVVGYTDSTGSAQLNQTLSQNRAQSVVNALVQRGVAGGRLSAQGMGASNPIADNA 193
Query: 139 DEDAYAKNRRAIVFLK 154
E A+NRR ++L+
Sbjct: 194 TEAGRAQNRRVEIYLR 209
>gi|289577780|ref|YP_003476407.1| OmpA/MotB domain protein [Thermoanaerobacter italicus Ab9]
gi|289527493|gb|ADD01845.1| OmpA/MotB domain protein [Thermoanaerobacter italicus Ab9]
Length = 239
Score = 86.8 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 52/133 (39%), Gaps = 5/133 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
++ + S+ D++ FD S + P + VL +G+ L+ +EG D+
Sbjct: 99 QGMVTSYIDERGLVISLQDTILFDLGSADVHPEEKDVLIKIGNMLKTLPNHIRVEGFTDD 158
Query: 92 LGSRNS----SIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
L N+ + L + RA V G+ ++ YG+ P V E+ N
Sbjct: 159 LPIHNNKFDSNWELSVIRATNVVKILVHEAGVDPKKISAVGYGEYRPVVPNDSEEHRRLN 218
Query: 147 RRAIVFLKGCRAN 159
RR + + +
Sbjct: 219 RRVDIVIMNAEYD 231
>gi|326799819|ref|YP_004317638.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
gi|326550583|gb|ADZ78968.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
Length = 434
Score = 86.8 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 56/143 (39%), Gaps = 2/143 (1%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS 70
+A + SG + K + E + ++ FD S +IRP L
Sbjct: 293 AADAKVDGSGCPLPEAKKVVQQITVTEED--RRVVDEAIKNLEFDLSKATIRPTSYPSLD 350
Query: 71 NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
+ L + + + GH D GS ++ L RA AV Y V++G + SR++ T YG
Sbjct: 351 KVARLLVEKNFSLKLAGHTDNTGSMKLNMRLSKERAEAVKAYLVSKGANPSRIEATGYGP 410
Query: 131 EMPSVYGHDEDAYAKNRRAIVFL 153
P + NRR L
Sbjct: 411 TQPIATNATAEGRQANRRVEFTL 433
>gi|347159|gb|AAC36902.1| protein F [Pseudomonas fluorescens]
Length = 317
Score = 86.8 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 1/108 (0%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALG 102
V V FD ++P + NL ++ + + + GH D +G + L
Sbjct: 208 QVVRVELDVKFDFDKSVVKPNSYGDVKNLADFMAQYPATNVEVAGHTDSIGPDAYNQKLS 267
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
RRA AV V G++ SR+ YG+ P E A NRR
Sbjct: 268 QRRADAVKQVLVKDGVAPSRITAVGYGESRPVADNATEAGRAVNRRVE 315
>gi|152984892|ref|YP_001347626.1| outer membrane protein [Pseudomonas aeruginosa PA7]
gi|150960050|gb|ABR82075.1| probable outer membrane protein [Pseudomonas aeruginosa PA7]
Length = 269
Score = 86.8 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 61/140 (43%), Gaps = 2/140 (1%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ ++S L+ + ++GD V FD + ++PA + L +L+ +
Sbjct: 125 SVQEQGQRLSEEIASLSTEETERGLVLTLGD-VLFDFNRAELKPAANRTALKLVQFLQLN 183
Query: 80 DCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ IEG+ D +G R +++ L RA AV + G+ +RM+V YG+ P
Sbjct: 184 PRRVIRIEGYTDSVGDRQANLDLSRARAQAVADVLADLGVDPARMQVAGYGEAFPVTDNA 243
Query: 139 DEDAYAKNRRAIVFLKGCRA 158
A+NRR + +
Sbjct: 244 SNRGRAQNRRVEIVFSNDKG 263
>gi|238797729|ref|ZP_04641223.1| Peptidoglycan-associated lipoprotein [Yersinia mollaretii ATCC
43969]
gi|238718370|gb|EEQ10192.1| Peptidoglycan-associated lipoprotein [Yersinia mollaretii ATCC
43969]
Length = 177
Score = 86.8 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDT----------VLNESSLQEQFSS 46
MQ + + + L + + + S + + S E + +
Sbjct: 10 MQLNKVLKGLMLALPVLAVAACSSNKSANNDQSGMGAGTGTENGSNLSSEEQARLQMQEL 69
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRR 105
+ V+F Y I Q+L ++L + ++EGHADE G+ +IALG RR
Sbjct: 70 QKNNIVYFGFDKYDIGSDFAQMLDAHAAFLRSNPSYKVVVEGHADERGTPEYNIALGERR 129
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
A AV Y +G+SA ++ + SYGKE P+V GHDE A+AKNRRA++
Sbjct: 130 ANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAFAKNRRAVLV 176
>gi|83950087|ref|ZP_00958820.1| peptidoglycan-associated lipoprotein [Roseovarius nubinhibens ISM]
gi|83837986|gb|EAP77282.1| peptidoglycan-associated lipoprotein [Roseovarius nubinhibens ISM]
Length = 186
Score = 86.8 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 1 MQ-YSTIFIILSAITMMSISGIDNLDTKISSPDTV----------LNESSLQEQFSSSVG 49
M+ + I+ + + + + S D + ++ + FS +VG
Sbjct: 16 MKTFQKAMILGTGLLLAACSSPDRFGDSTVDLNGTGANSGVIAGSASDPTSPAYFSQTVG 75
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
D V F +++ Q L+ WL D D LIEGHADE G+R ++ALG RRA +
Sbjct: 76 DRVLFPVDQHTLTSTAQQTLNGQAQWLLRNTDYDALIEGHADEQGTREYNLALGARRANS 135
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
V Y +++G+ ++R+KV SYGKE P +E YA+NRR++ +
Sbjct: 136 VQEYLISQGVPSTRLKVISYGKERPIEICSEESCYAQNRRSVTVIS 181
>gi|238793898|ref|ZP_04637518.1| Peptidoglycan-associated lipoprotein [Yersinia intermedia ATCC
29909]
gi|238726801|gb|EEQ18335.1| Peptidoglycan-associated lipoprotein [Yersinia intermedia ATCC
29909]
Length = 177
Score = 86.8 bits (213), Expect = 1e-15, Method: Composition-based stats.
Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDT----------VLNESSLQEQFSS 46
MQ + + + L + + + S + + S E + +
Sbjct: 10 MQLNKVLKGLMLALPVLAIAACSSNKSANNDQSGMGAGTGTENGSNLSSEEQARLQMQEL 69
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRR 105
+ V+F Y I Q+L ++L + ++EGHADE G+ +IALG RR
Sbjct: 70 QKNNIVYFGFDKYDIGSDFAQMLDAHAAFLRSNPSYKVVVEGHADERGTPEYNIALGERR 129
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
A AV Y +G+SA ++ + SYGKE P+V GHDE A+AKNRRA++
Sbjct: 130 ANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAFAKNRRAVLV 176
>gi|315127968|ref|YP_004069971.1| lipoprotein [Pseudoalteromonas sp. SM9913]
gi|315016482|gb|ADT69820.1| lipoprotein [Pseudoalteromonas sp. SM9913]
Length = 210
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 54/124 (43%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHA 89
+ + + + ++ F T I L+ + S + K++ +EGH
Sbjct: 81 AGSGVEVVREGDNLRLVMPSNITFATDQSYISSGFHDTLNAIASVMNKYEKTYLSVEGHT 140
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G + ++ L +RA +V NY V + I A+R+ + YG+ P + A+NRR
Sbjct: 141 DSTGKDSYNMTLSEQRAQSVKNYLVNQQIMAARVSTSGYGESRPIATNDTANGRAQNRRV 200
Query: 150 IVFL 153
+ +
Sbjct: 201 EIQI 204
>gi|77919760|ref|YP_357575.1| outer membrane protein [Pelobacter carbinolicus DSM 2380]
gi|77545843|gb|ABA89405.1| outer membrane protein [Pelobacter carbinolicus DSM 2380]
Length = 224
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 54/136 (39%), Gaps = 4/136 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQEQ---FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LE 77
+ + + + +S+Q + + V FD +SYS++ L +
Sbjct: 77 EKQEQAMRQQLAGVEGASIQRDAEVLAVTFKSDVLFDVNSYSVKSGGYDELQRVAGVLNN 136
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
I GH D GS ++ L +RA AV N V G++ +R+ YG+ P
Sbjct: 137 YPQTSIQIAGHTDSTGSEQYNMQLSRQRAEAVKNVLVGYGVAPARLMTVGYGESKPIASN 196
Query: 138 HDEDAYAKNRRAIVFL 153
+E NRR + +
Sbjct: 197 ANEAGRQINRRVAITI 212
>gi|329113829|ref|ZP_08242600.1| Outer membrane lipoprotein Omp16 [Acetobacter pomorum DM001]
gi|326696839|gb|EGE48509.1| Outer membrane lipoprotein Omp16 [Acetobacter pomorum DM001]
Length = 160
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 8/154 (5%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDT------KISSPDTVLNESSLQEQFSSSVGDSVFF 54
M+ + L + ++S DN +T + P + ++VGD VF+
Sbjct: 1 MRLK-VVAALGMVALLSACAHDNANTGASNGAATTQPTISGPVPGSEADLVANVGDRVFY 59
Query: 55 DTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYF 113
D + +R L W + + + G+ D+ G+ +IALG RRA A +Y
Sbjct: 60 DLNKSGLRDDAKDTLQKQADWLAKYPQVNVEVAGNCDDRGTEEYNIALGQRRANAARDYL 119
Query: 114 VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
VA+G+++SR+ SYGK+ P+ G DEDA+A+NR
Sbjct: 120 VAKGVASSRISTISYGKDRPTALGDDEDAWAQNR 153
>gi|325579032|ref|ZP_08148988.1| peptidoglycan-associated lipoprotein [Haemophilus parainfluenzae
ATCC 33392]
gi|325159267|gb|EGC71401.1| peptidoglycan-associated lipoprotein [Haemophilus parainfluenzae
ATCC 33392]
Length = 155
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/151 (27%), Positives = 76/151 (50%), Gaps = 1/151 (0%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSI 61
++ ++ ++ ++ N D + + + ++V+F ++I
Sbjct: 3 KFVKSLLVAGSVAALAACSSSNNDAAGNGANNGQTFGGYSVEDLQQRYNTVYFGFDKFNI 62
Query: 62 RPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA 120
+Q+L ++L ++EG+ DE G+ +IALG RRA AV + +G+ A
Sbjct: 63 EGEYVQILDAHAAYLNATPASKVVVEGNTDERGTPEYNIALGQRRADAVKGFLAGKGVDA 122
Query: 121 SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
++ SYG+E P+V GHDE AY+KNRRA++
Sbjct: 123 GKVSTVSYGEEKPAVLGHDEAAYSKNRRAVL 153
>gi|289670151|ref|ZP_06491226.1| OmpA family outer membrane lipoprotein [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 241
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 1/130 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGH 88
+ +T + + S ++ D + FD +++P L+ + S E + + GH
Sbjct: 102 TANTGIEVQRQGDNISLNLPDGITFDFGKSALKPEFYTALNGVASTLREYNQTMVEVVGH 161
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D +GS + L RA AV Y A+G+ RM+ GK P + + AKNRR
Sbjct: 162 TDSVGSDAVNQRLSEERAGAVAQYLTAQGVQRERMETMGAGKRYPIADNNTDAGRAKNRR 221
Query: 149 AIVFLKGCRA 158
+ L RA
Sbjct: 222 VEIRLIPLRA 231
>gi|227327557|ref|ZP_03831581.1| peptidoglycan-associated outer membrane lipoprotein [Pectobacterium
carotovorum subsp. carotovorum WPP14]
gi|253687644|ref|YP_003016834.1| peptidoglycan-associated lipoprotein [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|261822329|ref|YP_003260435.1| peptidoglycan-associated outer membrane lipoprotein [Pectobacterium
wasabiae WPP163]
gi|251754222|gb|ACT12298.1| peptidoglycan-associated lipoprotein [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|261606342|gb|ACX88828.1| peptidoglycan-associated lipoprotein [Pectobacterium wasabiae
WPP163]
Length = 169
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 54/168 (32%), Positives = 82/168 (48%), Gaps = 16/168 (9%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDT-----------VLNESSLQEQFS 45
MQ++ + + L + + + S N D SS +E + +
Sbjct: 1 MQFNKVLKGLMLALPVLAVAACSSNKNADNDQSSMGAGNNGMMDGGNMSSSEQARLQMQE 60
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLR 104
+ V+F Y + Q+L ++L + IEGHADE G+ +IALG R
Sbjct: 61 LQRNNIVYFGLDKYDVSSEFAQMLDAHAAFLRSNPSYKVTIEGHADERGTPEYNIALGER 120
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
RA AV Y +G+S+ ++ + SYGKE P+V GHDE AYAKNRRA++
Sbjct: 121 RANAVQMYLQGKGVSSDQISIVSYGKEKPAVLGHDEAAYAKNRRAVLV 168
>gi|83943919|ref|ZP_00956376.1| peptidoglycan-associated lipoprotein [Sulfitobacter sp. EE-36]
gi|83954492|ref|ZP_00963203.1| peptidoglycan-associated lipoprotein [Sulfitobacter sp. NAS-14.1]
gi|83840776|gb|EAP79947.1| peptidoglycan-associated lipoprotein [Sulfitobacter sp. NAS-14.1]
gi|83845166|gb|EAP83046.1| peptidoglycan-associated lipoprotein [Sulfitobacter sp. EE-36]
Length = 174
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 56/170 (32%), Positives = 82/170 (48%), Gaps = 15/170 (8%)
Query: 1 MQ-YSTIFIILSAITMMSISGIDNLDTKISSPDTV-------------LNESSLQEQFSS 46
M T ++++A+ + + + D + N+ + F
Sbjct: 1 MNRILTATLLIAALAVSACTNPDRFGADGMNNGAANGAGLNGGIIPGSANDPASTAYFQQ 60
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRR 105
+VGD V F ++ P L +WL + D +IEGHADE G+R ++ALG RR
Sbjct: 61 AVGDRVLFLVDQSNLTPEGQATLDGQAAWLNTNTDYQAVIEGHADEQGTREYNLALGARR 120
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
A A Y ++RGI+ASR++V SYGKE P E YAKNRRA+ L G
Sbjct: 121 ANAAREYLISRGIAASRLRVVSYGKERPIEVCSSEACYAKNRRAVTVLAG 170
>gi|172061391|ref|YP_001809043.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6]
gi|171993908|gb|ACB64827.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6]
Length = 215
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 54/136 (39%), Gaps = 1/136 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
I N ++ +V SV F T+ Y+I PA +L++L + +
Sbjct: 74 AIKNKLAPSAAQTGTQVTEQPDGSLKLNVPSSVTFATNQYAITPAFTPLLNDLATTLNQN 133
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ G+ D GS + L RA +V N RG++ R+ G P
Sbjct: 134 PQLTGSVIGYTDSTGSAQLNQTLSQNRAQSVVNALAQRGVAGGRLSAQGMGPSNPIADNA 193
Query: 139 DEDAYAKNRRAIVFLK 154
E A+NRR ++L+
Sbjct: 194 TEAGRAQNRRVEIYLR 209
>gi|238757961|ref|ZP_04619142.1| Peptidoglycan-associated lipoprotein [Yersinia aldovae ATCC 35236]
gi|238703715|gb|EEP96251.1| Peptidoglycan-associated lipoprotein [Yersinia aldovae ATCC 35236]
Length = 168
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 50/167 (29%), Positives = 77/167 (46%), Gaps = 15/167 (8%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDT----------VLNESSLQEQFSS 46
MQ + + + L + + + S + + S E + +
Sbjct: 1 MQLNKVLKGLMLALPVLAIAACSSNKSANNDQSGMGAGTGTENGSNLSSEEQARLQMQEL 60
Query: 47 SVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRR 105
+ V+F Y I Q+L + ++EGHADE G+ +IALG RR
Sbjct: 61 QKNNIVYFGFDKYDIGSDFAQMLDAHSAFLRSNPSYKVVVEGHADERGTPEYNIALGERR 120
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
A AV Y +G+SA ++ + SYGKE P+V GHDE A+AKNRRA++
Sbjct: 121 ANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAFAKNRRAVLV 167
>gi|255531842|ref|YP_003092214.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366]
gi|255344826|gb|ACU04152.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366]
Length = 445
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 61/143 (42%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS 70
++ T++ SG + +T + + + ++ FD +IR L+
Sbjct: 302 ASGTVVDGSGCPIKVQREVIKETKVVVTEADRKVVDEAIKNLEFDLGKATIRAKSYATLN 361
Query: 71 NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
+ + L + + + GH D GS ++ L RA A+ Y V++G +ASR++ T YG
Sbjct: 362 KVAALLIEKNFSLKLAGHTDNTGSMALNLRLSKERAEAIKAYLVSQGANASRIEATGYGP 421
Query: 131 EMPSVYGHDEDAYAKNRRAIVFL 153
P + KNRR L
Sbjct: 422 NQPIASNKTAEGRQKNRRVEFTL 444
>gi|325106498|ref|YP_004276152.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
gi|324975346|gb|ADY54330.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
Length = 435
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 60/140 (42%), Gaps = 1/140 (0%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
T++ +G + + ++ + ++ ++ + F D +IR L+ +
Sbjct: 296 TVVDGAGCPMTGPREIVREKIVVTEADRKIVDEAIKNLEF-DLGKATIRSTSYATLNRVA 354
Query: 74 SWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
L + + + GH D GS ++ L RA +V Y V++G +ASR++ T YG P
Sbjct: 355 QLLVEKNFSLKLAGHTDNTGSMELNMRLSKERAESVKAYLVSQGANASRIEATGYGPTQP 414
Query: 134 SVYGHDEDAYAKNRRAIVFL 153
+ KNRR L
Sbjct: 415 IASNKTAEGRQKNRRVEFTL 434
>gi|254302883|ref|ZP_04970241.1| possible outer membrane protein [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148323075|gb|EDK88325.1| possible outer membrane protein [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 212
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 51/133 (38%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
+ K T ++ V F + S +I + L+ + +
Sbjct: 76 QEKELKAKLQGTQAEVKKDGNALVINLPGGVTFASDSANITSSFYSALNGIAQSLNNYPE 135
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ G+ D G+ + L RRA AV Y VA+G+S+SR+ +G P +
Sbjct: 136 TRIQVNGYTDSTGNDAHNQELSQRRANAVAQYLVAQGVSSSRIVANGFGSSNPIASNSTQ 195
Query: 141 DAYAKNRRAIVFL 153
+ +NRR + +
Sbjct: 196 EGRLQNRRVEIKI 208
>gi|167032610|ref|YP_001667841.1| OmpF family protein [Pseudomonas putida GB-1]
gi|166859098|gb|ABY97505.1| OmpF family protein [Pseudomonas putida GB-1]
Length = 344
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 4/138 (2%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD ++P + NL ++++
Sbjct: 203 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQ 262
Query: 79 H-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVY 136
+ ++EGH D +G + L RRA AV + + +SR+ YG+ P
Sbjct: 263 YPQTTTVVEGHTDSVGPDAYNQKLSERRANAVKQVLTQQYGVESSRVDSVGYGETRPVAD 322
Query: 137 GHDEDAYAKNRRAIVFLK 154
E+ A NRR ++
Sbjct: 323 NATEEGRAINRRVEAQVE 340
>gi|124003886|ref|ZP_01688734.1| OmpA/MotB, putative [Microscilla marina ATCC 23134]
gi|123990941|gb|EAY30408.1| OmpA/MotB, putative [Microscilla marina ATCC 23134]
Length = 389
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
+ ++FF+ + + PA L L + I GH D +G+ ++ L RRA
Sbjct: 282 ILKNIFFEFAKARLLPASFPELDKLVNLLTTHPQIKVRIMGHTDNVGTDTRNLQLSNRRA 341
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+V Y +GI A+R+ +G+ P ++ KNRR +
Sbjct: 342 KSVVTYLKKQGIRANRLTFKGFGESRPIDSNVTKEGRQKNRRVEFVV 388
>gi|238790499|ref|ZP_04634268.1| Peptidoglycan-associated lipoprotein [Yersinia frederiksenii ATCC
33641]
gi|238721443|gb|EEQ13114.1| Peptidoglycan-associated lipoprotein [Yersinia frederiksenii ATCC
33641]
Length = 168
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDT----------VLNESSLQEQFSS 46
MQ + + + L + + + S + + S E + +
Sbjct: 1 MQLNKVLKGLMLALPVLAIAACSSNKSANNDQSGMGAGTGTENGSNMSSEEQARLQMQEL 60
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRR 105
+ V+F Y I Q+L ++L + ++EGHADE G+ +IALG RR
Sbjct: 61 QKNNIVYFGFDKYDIGSDFAQMLDAHAAFLRSNPSYKVVVEGHADERGTPEYNIALGERR 120
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
A AV Y +G+SA ++ + SYGKE P+V GHDE A+AKNRRA++
Sbjct: 121 ANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAFAKNRRAVLV 167
>gi|218514237|ref|ZP_03511077.1| outer membrane lipoprotein [Rhizobium etli 8C-3]
Length = 141
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++ FD +++P L+++ L K + + GH D
Sbjct: 13 GTGISVTRNGDNIILNMPSNITFDVDQDAVKPGFYPTLNSVAIVLRKFNRTLIDVNGHTD 72
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + L RRA +V +Y +GI R+ +G P E A+NRR
Sbjct: 73 STGSLQHNQDLSQRRALSVADYLGGQGIDQRRVSAVGFGPSQPVASNASEAGRAQNRRVE 132
Query: 151 VFL 153
+ +
Sbjct: 133 IQI 135
>gi|261416280|ref|YP_003249963.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261372736|gb|ACX75481.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 485
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 51/136 (37%), Gaps = 1/136 (0%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
+ D + Q V + V F++ +I L + +E
Sbjct: 345 LCPEQAESLNNYKDDDGCPDEVPQPPKKVFVLEGVNFESGKSTITQDSYISLMKVVDIME 404
Query: 78 KHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
F I GH D +G+++ ++ L RA AV N+ V +GI+ SRM G P
Sbjct: 405 TFPEATFEIVGHTDNIGNKDKNMTLSADRANAVKNFLVEKGIAESRMTTQGMGDTKPVAS 464
Query: 137 GHDEDAYAKNRRAIVF 152
+ A+NRR
Sbjct: 465 NKTPEGRAQNRRIEFI 480
>gi|118589219|ref|ZP_01546625.1| hypothetical protein SIAM614_06738 [Stappia aggregata IAM 12614]
gi|118437919|gb|EAV44554.1| hypothetical protein SIAM614_06738 [Stappia aggregata IAM 12614]
Length = 360
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 1/136 (0%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-E 77
+ T + + +E+ S D+++F + S + P +L++L +
Sbjct: 223 ASQSAASTALEPEGNLDSEACTGRFEILSRTDNIYFPSGSSQLDPRSEPLLNSLVDIILR 282
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+ GH D GS S+ L RRA AV Y V++ I SR+K YG+ P
Sbjct: 283 CPGLVIEVGGHTDSDGSDTSNQLLSERRAGAVKQYLVSKSIPESRIKSVGYGESRPVAAN 342
Query: 138 HDEDAYAKNRRAIVFL 153
D +NRR +
Sbjct: 343 TSADGKRRNRRIEFVV 358
>gi|254449210|ref|ZP_05062659.1| outer membrane protein [gamma proteobacterium HTCC5015]
gi|198261187|gb|EDY85483.1| outer membrane protein [gamma proteobacterium HTCC5015]
Length = 229
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 53/137 (38%), Gaps = 3/137 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE---K 78
+ + + +L S ++ F T S + + L +L L+
Sbjct: 85 KAQEKAAAEQKAEEQKKALDSVRSINLSSGAAFSTGSAKLSSKGKESLDDLAMKLKALGN 144
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
I+GH D GS + + + +RA AV +Y V +G+ S + YG+ P
Sbjct: 145 GVKSVQIDGHTDSQGSESLNQRVSEQRAQAVKSYLVEQGVDGSLINTKGYGESQPVADNA 204
Query: 139 DEDAYAKNRRAIVFLKG 155
A+NRR + + G
Sbjct: 205 TAAGRAQNRRVEISVDG 221
>gi|254429703|ref|ZP_05043410.1| OmpA family protein [Alcanivorax sp. DG881]
gi|196195872|gb|EDX90831.1| OmpA family protein [Alcanivorax sp. DG881]
Length = 368
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 48/135 (35%), Gaps = 2/135 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
D S + + E + ++F +I+ + +
Sbjct: 225 DRCPNTASGAVVDADGCQVYESMQNRETSVIYFGFDRDTIQGQFSDEIKGVADRLNAGEQ 284
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVYGHD 139
+EGHAD G + + L RRA +V + + A ++ +G+ P
Sbjct: 285 GRIRVEGHADSTGPADYNQGLSERRAQSVKDRLMKDFSVGADKITTEGFGESKPVADNST 344
Query: 140 EDAYAKNRRAIVFLK 154
D AKNRRA + ++
Sbjct: 345 ADGRAKNRRADIIVE 359
>gi|300770791|ref|ZP_07080669.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33861]
gi|300762348|gb|EFK59166.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33861]
Length = 440
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 54/136 (39%), Gaps = 1/136 (0%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
SG + + ++ ++ ++ + F D +IR L + S L
Sbjct: 305 GSGCPLPVAETKVVEKIVVTEEDRKVVDEAIKNLEF-DLGKSTIRSTSYPSLDRVASLLI 363
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+ + + GH D GS +++ L RA AV Y +G + SR++ T YG P
Sbjct: 364 EKNFSLKLAGHTDNTGSMKTNLRLSKERAEAVKAYLSGKGANPSRIEATGYGPNQPIASN 423
Query: 138 HDEDAYAKNRRAIVFL 153
+ +NRR L
Sbjct: 424 ATAEGRQQNRRVEFTL 439
>gi|227538391|ref|ZP_03968440.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33300]
gi|227241773|gb|EEI91788.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33300]
Length = 440
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 54/136 (39%), Gaps = 1/136 (0%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
SG + + ++ ++ ++ + F D +IR L + S L
Sbjct: 305 GSGCPLPVAETKVVEKIVVTEEDRKVVDEAIKNLEF-DLGKSTIRSTSYPSLDRVASLLI 363
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+ + + GH D GS +++ L RA AV Y +G + SR++ T YG P
Sbjct: 364 EKNFSLKLAGHTDNTGSMKTNLRLSKERAEAVKAYLSGKGANPSRIEATGYGPNQPIASN 423
Query: 138 HDEDAYAKNRRAIVFL 153
+ +NRR L
Sbjct: 424 ATAEGRQQNRRVEFTL 439
>gi|188575664|ref|YP_001912593.1| OmpA family protein [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188520116|gb|ACD58061.1| OmpA family protein [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 241
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 1/130 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGH 88
+ +T + + S ++ D + FD +++P L+ + S E + + GH
Sbjct: 102 TANTGIEVQRQGDNISLNLPDGITFDFGKSALKPEFYTALNGVASTLREYNQTMVEVVGH 161
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D +GS ++ L RA AV Y A+G+ RM+ GK P + + AKNRR
Sbjct: 162 TDSVGSDAANQRLSEERAGAVAQYLTAQGVQRERMETMGAGKRYPIADNNTDAGRAKNRR 221
Query: 149 AIVFLKGCRA 158
+ L RA
Sbjct: 222 VEIRLIPLRA 231
>gi|227536011|ref|ZP_03966060.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33300]
gi|227244124|gb|EEI94139.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33300]
Length = 460
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 45/101 (44%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
+ F+ S ++ L L L ++ ++G+A G+ ++ L RA AV
Sbjct: 359 IQFEFDSSVLKTESYSTLDRLAKELRDNNSSVTLDGYASAEGTEAYNMTLSKDRANAVKQ 418
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
Y V G++A+++ YG+ P E+ +NRR +
Sbjct: 419 YLVNAGVTAAKVTANGYGEANPVASNATEEGRIQNRRVEIK 459
>gi|325274538|ref|ZP_08140599.1| OmpF family protein [Pseudomonas sp. TJI-51]
gi|324100318|gb|EGB98103.1| OmpF family protein [Pseudomonas sp. TJI-51]
Length = 345
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 4/138 (2%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD ++P + NL ++++
Sbjct: 204 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQ 263
Query: 79 H-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVY 136
+ ++EGH D +G + L RRA AV + + +SR+ YG+ P
Sbjct: 264 YPQTTTVVEGHTDSVGPDAYNQKLSERRANAVKQVLTQQYGVESSRVDSVGYGETRPVAD 323
Query: 137 GHDEDAYAKNRRAIVFLK 154
E+ A NRR ++
Sbjct: 324 NATEEGRAINRRVEAQVE 341
>gi|110833683|ref|YP_692542.1| outer membrane protein OprF [Alcanivorax borkumensis SK2]
gi|110646794|emb|CAL16270.1| outer membrane protein OprF [Alcanivorax borkumensis SK2]
Length = 384
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 63/141 (44%), Gaps = 5/141 (3%)
Query: 21 IDNLDTKISSPDTV-LNESSLQEQFSSSVGDSVFFDT--SSYSIRPADIQVLSNLGSWLE 77
++++D ++P +++ Q+ V ++++ + +R L NL +
Sbjct: 237 VNSMDDCPNTPAGALVDDKGCQKYLEKDVKETLYVEFGHDKTEVRQTSYPSLENLAEDMR 296
Query: 78 KHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSV 135
++ + ++EGH D GS + L +RA AV V + +SA R+ YG+E P
Sbjct: 297 QYPSANLVLEGHTDSTGSAAYNKKLSQQRADAVKAVLVDKFGVSADRITTVGYGEEKPIS 356
Query: 136 YGHDEDAYAKNRRAIVFLKGC 156
+ A+NRR LK
Sbjct: 357 DNKTSEGRAENRRVETILKAT 377
>gi|78043824|ref|YP_359811.1| flagellar motor protein MotB [Carboxydothermus hydrogenoformans
Z-2901]
gi|77995939|gb|ABB14838.1| flagellar motor protein MotB [Carboxydothermus hydrogenoformans
Z-2901]
Length = 266
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 48/136 (35%), Gaps = 5/136 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
K + + + + S D++ F S + P ++ +G L IE
Sbjct: 116 KAKGLNASVTATLEERGVVISFKDAILFKLGSAELTPQAKAIVRQIGEILLPLPNYIRIE 175
Query: 87 GHADELGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDED 141
GH D L S+ L RA +V + + R+ YG+ P V E
Sbjct: 176 GHTDNLPINTSRFPSNWELSTARATSVVHELIDGLHFPPYRLSAVGYGEYRPKVPNTSEQ 235
Query: 142 AYAKNRRAIVFLKGCR 157
KNRR + + +
Sbjct: 236 NRQKNRRVDIVILRSK 251
>gi|166712665|ref|ZP_02243872.1| OmpA family protein [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 241
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 1/130 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGH 88
+ +T + + S ++ D + FD +++P L+ + S E + + GH
Sbjct: 102 TANTGIEVQRQGDNISLNLPDGITFDFGKSALKPEFYTALNGVASTLREYNQTMVEVVGH 161
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D +GS ++ L RA AV Y A+G+ RM+ GK P + + AKNRR
Sbjct: 162 TDSVGSDAANQRLSEERAGAVAQYLTAQGVQRERMETMGAGKRYPIADNNTDAGRAKNRR 221
Query: 149 AIVFLKGCRA 158
+ L RA
Sbjct: 222 VEIRLIPLRA 231
>gi|260174346|ref|ZP_05760758.1| OmpA/MotB domain-containing protein [Bacteroides sp. D2]
Length = 375
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 52/120 (43%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+ + D + F+ +I L + +++ + I+GH D +G
Sbjct: 256 VVAQKTIAGKTICAVDVINFEFGKSAINKNSYAYLDKIAMLMQRTNLSVEIKGHTDNVGK 315
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ ++ L +RA AV++Y + +G+ +S++ T YG P E+ NRR +K
Sbjct: 316 EDFNMELSRKRAKAVYDYLIKKGVGSSKLSYTYYGMTKPIASNDTEEGRLINRRVEFEIK 375
>gi|218660571|ref|ZP_03516501.1| outer membrane lipoprotein [Rhizobium etli IE4771]
Length = 196
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++ FD +++P L+++ L K + + GH D
Sbjct: 68 GTGISVTRNGDNIILNMPSNITFDVDQDAVKPGFYPTLNSVAIVLRKFNRTLIDVNGHTD 127
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + L RRA +V +Y +GI R+ +G P E A+NRR
Sbjct: 128 STGSLQHNQDLSQRRALSVADYLGGQGIDQRRVSAVGFGPSQPVASNASEAGRAQNRRVE 187
Query: 151 VFL 153
+ +
Sbjct: 188 IQI 190
>gi|110678313|ref|YP_681320.1| OmpA family domain-containing protein [Roseobacter denitrificans
OCh 114]
gi|109454429|gb|ABG30634.1| OmpA family domain protein [Roseobacter denitrificans OCh 114]
Length = 221
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 54/124 (43%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHA 89
+ + ++ ++ S+ + F T S+S+RP L + L+ + + GH
Sbjct: 94 GNDDVQITNTGDRLIVSLPQDLLFATDSFSVRPDLQNDLYTVAGSLQNYPASTIQVIGHT 153
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G + L RRA +V + G++ SR++ G+ P +E A+NRR
Sbjct: 154 DSDGDAAYNQRLSERRAGSVAGILMDAGVTPSRLQTIGRGESQPVASNLNEAGKAQNRRV 213
Query: 150 IVFL 153
+ +
Sbjct: 214 EIII 217
>gi|262198074|ref|YP_003269283.1| hypothetical protein Hoch_4901 [Haliangium ochraceum DSM 14365]
gi|262081421|gb|ACY17390.1| Myxococcales GC_trans_RRR domain protein [Haliangium ochraceum DSM
14365]
Length = 1987
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 51/141 (36%), Gaps = 8/141 (5%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS------SSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
+D LD + N+ + Q + D V+F ++ ++ +L N+
Sbjct: 1805 VDRLDNCPDEAGSERNQGCKRRQRVRLSGDRLEILDRVYFRSNRAVLQRRSNPLLQNVAQ 1864
Query: 75 --WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
+EGH D G ++ L RA AV + V G+ A R+ +G+
Sbjct: 1865 VLIAHPEIEHVRVEGHTDNRGDPTYNMNLSQSRAEAVVAFLVQEGVEAKRLAAVGFGETQ 1924
Query: 133 PSVYGHDEDAYAKNRRAIVFL 153
P A NRR +
Sbjct: 1925 PLEDNKTRRGRAANRRVEFNI 1945
>gi|347153|gb|AAC36899.1| protein F [Pseudomonas fluorescens]
Length = 317
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 1/108 (0%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALG 102
V V FD ++P + NL ++ + D + + GH D +G + L
Sbjct: 208 QVVRVELDVKFDFDKSVVKPNSYGDVKNLADFMAQYPDTNVEVAGHTDSVGPDAYNQKLS 267
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
RRA AV V G++ SR+ YG+ P E A NRR
Sbjct: 268 QRRADAVKQVLVKDGVAPSRITSVGYGESRPVADNATEAGRAVNRRVE 315
>gi|148254500|ref|YP_001239085.1| putative outer membrane protein and related
peptidoglycan-associated (lipo)proteins [Bradyrhizobium
sp. BTAi1]
gi|146406673|gb|ABQ35179.1| putative outer membrane protein and related
peptidoglycan-associated (lipo)proteins [Bradyrhizobium
sp. BTAi1]
Length = 707
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 33/126 (26%), Positives = 52/126 (41%), Gaps = 1/126 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGH 88
+ E+ + FDT S + + +L ++ ++ D + +IEGH
Sbjct: 582 ESPPLPTEACQPAFNGLLAKGRIRFDTGSAELSRESLALLDHIVVVAQRCKDAEIVIEGH 641
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D +G ++ L RRA AV Y GI SRM YG+ P + A+NRR
Sbjct: 642 TDNVGDEEDNMDLSKRRAVAVVGYIGEAGIDTSRMTSAGYGQTRPIASNDTAEGRAQNRR 701
Query: 149 AIVFLK 154
+K
Sbjct: 702 IEFVVK 707
>gi|312882598|ref|ZP_07742338.1| peptidoglycan-associated lipoprotein [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309369758|gb|EFP97270.1| peptidoglycan-associated lipoprotein [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 176
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 23/175 (13%)
Query: 1 MQYST----IFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD------ 50
MQ + + I L + M + S ++ + +T +++ ++++G
Sbjct: 1 MQLNKVLKGLLIALPVLAMTACSSSNDAAKNSGASETNQAQTATDGTVANALGQAGQLSE 60
Query: 51 ------------SVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNS 97
+++F + +I +VL+ + + +EGHADE G+
Sbjct: 61 QELKEQALRETQTIYFAFDNSTIASEYEKVLAAHAAYLSQNPSVKVTVEGHADERGTPEY 120
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+IALG RRA AV Y A G+ A ++ + SYG+E P + G +AYAKNRRA++
Sbjct: 121 NIALGERRAKAVAKYLQALGVQADQISIVSYGEEKPLLLGQTAEAYAKNRRAVLV 175
>gi|300771716|ref|ZP_07081591.1| outer membrane protein OprF [Sphingobacterium spiritivorum ATCC
33861]
gi|300761705|gb|EFK58526.1| outer membrane protein OprF [Sphingobacterium spiritivorum ATCC
33861]
Length = 460
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 45/101 (44%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
+ F+ S ++ L L L ++ ++G+A G+ ++ L RA AV
Sbjct: 359 IQFEFDSSVLKTESYSTLDRLAKELRDNNSSVTLDGYASAEGTEAYNMTLSKDRANAVKQ 418
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
Y V G++A+++ YG+ P E+ +NRR +
Sbjct: 419 YLVNAGVTAAKVTANGYGEANPVASNATEEGRIQNRRVEIK 459
>gi|146308665|ref|YP_001189130.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp]
gi|145576866|gb|ABP86398.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp]
Length = 222
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 1/125 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHA 89
T + + + ++ F T S I + L+NL + + + + + GH
Sbjct: 92 QGTGVEVQRQGDVIQLIMPGNITFATDSAEIASSFYAPLNNLANSFRQYNQNSIEVVGHT 151
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GS + +++L RRA +V +Y +A+G+ SR+ G + P + A+NRR
Sbjct: 152 DSTGSHSYNMSLSQRRAQSVASYLIAQGVDGSRVSTRGMGPDQPVASNATAEGRAQNRRV 211
Query: 150 IVFLK 154
V L+
Sbjct: 212 EVTLR 216
>gi|71066360|ref|YP_265087.1| OmpA/OmpF family outer membrane protein [Psychrobacter arcticus
273-4]
gi|71039345|gb|AAZ19653.1| outer membrane protein, OmpA/OmpF family [Psychrobacter arcticus
273-4]
Length = 217
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 55/133 (41%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG-SWLEKHD 80
+ + V + + S+ F ++ + L L + E +
Sbjct: 78 AKQLEQQMAGTGVTVTPNANGNIDLVMPGSITFSFDDATLNNSFKPTLDKLAATMNEYNQ 137
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
I GH D G+ ++ L RAYAV NY ARG++++R+ V +YG+ P + E
Sbjct: 138 NTITIAGHTDSKGTDAYNMKLSRDRAYAVANYLSARGVASNRINVVAYGESRPVADNNSE 197
Query: 141 DAYAKNRRAIVFL 153
+NRR + +
Sbjct: 198 YGRQQNRRVELTV 210
>gi|56476024|ref|YP_157613.1| outer membrane lipoprotein [Aromatoleum aromaticum EbN1]
gi|56312067|emb|CAI06712.1| outer membrane lipoprotein containing OmpA/MotB domain [Aromatoleum
aromaticum EbN1]
Length = 232
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ + T + + +++ FDT+ I+P VL L ++++
Sbjct: 79 QEAELREQMAGTGVEVQRQGDTIRLQAPENITFDTNRADIKPQFQPVLGQLAQSIQQYPD 138
Query: 82 DFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ +EGH D +GS + + L RA AV +Y + RG+ A+R+ YG P
Sbjct: 139 TVIQVEGHTDSVGSASYNQTLSENRAGAVRSYLIQRGVDANRLAAVGYGLTRPVADNSTA 198
Query: 141 DAYAKNRRAIVFL 153
A+NRR + +
Sbjct: 199 AGRAQNRRVEMLI 211
>gi|51595504|ref|YP_069695.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
pseudotuberculosis IP 32953]
gi|153948068|ref|YP_001401830.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
pseudotuberculosis IP 31758]
gi|170025177|ref|YP_001721682.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
pseudotuberculosis YPIII]
gi|186894557|ref|YP_001871669.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
pseudotuberculosis PB1/+]
gi|51588786|emb|CAH20400.1| peptidoglycan-associated lipoprotein Pal, OmpA family of porins
[Yersinia pseudotuberculosis IP 32953]
gi|152959563|gb|ABS47024.1| peptidoglycan-associated lipoprotein [Yersinia pseudotuberculosis
IP 31758]
gi|169751711|gb|ACA69229.1| peptidoglycan-associated lipoprotein [Yersinia pseudotuberculosis
YPIII]
gi|186697583|gb|ACC88212.1| peptidoglycan-associated lipoprotein [Yersinia pseudotuberculosis
PB1/+]
Length = 168
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDT----------VLNESSLQEQFSS 46
MQ + + + L + + + S + + S E + +
Sbjct: 1 MQLNKVLKGLMLALPVLAVAACSSNKSANNDQSGMGAGTGTENGSNLSSEEQARLQMQEL 60
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRR 105
+ V+F Y I Q+L ++L + ++EGHADE G+ +IALG RR
Sbjct: 61 QKNNIVYFGFDKYDIGSDFAQMLDAHAAFLRSNPSYKVVVEGHADERGTPEYNIALGERR 120
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
A AV Y +G+SA ++ + SYGKE P+V GHDE A+AKNRRA++
Sbjct: 121 ASAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAFAKNRRAVLV 167
>gi|218893200|ref|YP_002442069.1| hypothetical protein PLES_44851 [Pseudomonas aeruginosa LESB58]
gi|218773428|emb|CAW29240.1| hypothetical protein PLES_44851 [Pseudomonas aeruginosa LESB58]
Length = 237
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHAD 90
T + + + ++ F T S +I P+ L+NL + +++ I G+ D
Sbjct: 99 GTGVEVQRQGDDIKLIMPGNITFATDSANIAPSFYAPLNNLANSFKQYNQNTIEIVGYTD 158
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GSR ++ L RRA +V Y A G+ +R+ G + P D A+NRR
Sbjct: 159 STGSRQHNMDLSQRRAQSVAGYLTALGVDGTRLSTRGMGPDQPIASNSTADGRAQNRRVE 218
Query: 151 VFLK 154
V L+
Sbjct: 219 VNLR 222
>gi|254428955|ref|ZP_05042662.1| Thrombospondin type 3 repeat family [Alcanivorax sp. DG881]
gi|196195124|gb|EDX90083.1| Thrombospondin type 3 repeat family [Alcanivorax sp. DG881]
Length = 384
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 60/141 (42%), Gaps = 5/141 (3%)
Query: 21 IDNLDTKISSPDTV-LNESSLQEQFSSSVGDSVFFDT--SSYSIRPADIQVLSNLGSWLE 77
++++D ++P +++ Q+ V ++++ + +R L NL +
Sbjct: 237 VNSMDECPNTPAGALVDDKGCQKYLDKDVKETLYVEFGHDKAEVRQTSYPSLENLAEGMR 296
Query: 78 KHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSV 135
++ + ++EGH D GS + L +RA AV V + R+ YG+E P
Sbjct: 297 QYPSANLVLEGHTDSTGSAAYNKKLSQQRADAVKTVLVDHYNVSADRITTVGYGEEKPIA 356
Query: 136 YGHDEDAYAKNRRAIVFLKGC 156
+ A+NRR +K
Sbjct: 357 DNKTSEGRAENRRVETIMKAT 377
>gi|163854239|ref|YP_001642282.1| peptidoglycan-associated lipoprotein [Methylobacterium extorquens
PA1]
gi|218533185|ref|YP_002424001.1| peptidoglycan-associated lipoprotein [Methylobacterium
chloromethanicum CM4]
gi|240141700|ref|YP_002966180.1| Outer membrane lipoprotein omp16 precursor [Methylobacterium
extorquens AM1]
gi|163665844|gb|ABY33211.1| peptidoglycan-associated lipoprotein [Methylobacterium extorquens
PA1]
gi|218525488|gb|ACK86073.1| peptidoglycan-associated lipoprotein [Methylobacterium
chloromethanicum CM4]
gi|240011677|gb|ACS42903.1| Outer membrane lipoprotein omp16 precursor [Methylobacterium
extorquens AM1]
Length = 170
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 7/165 (4%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDT------KISSPDTVLNESSLQEQFSSSVGDSVFFD 55
++ + + L+ + + + + F ++GD VFF+
Sbjct: 6 RFRGLSLTLALCAALGLGACSKDSDLADASGFGAGGPGGAARPGSAQDFVVNIGDRVFFE 65
Query: 56 TSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
+ S + P L SW FLIEGHADE G+R + +LG RRA V +Y
Sbjct: 66 SDSTDLTPTATATLDKQASWLQRYPRYSFLIEGHADERGTREYNYSLGARRAQTVQDYLA 125
Query: 115 ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
+RGISASRM+ SYGKE P +D +++NRR++ L G +
Sbjct: 126 SRGISASRMRTVSYGKERPVAVCNDISCWSQNRRSVSVLDGGAGS 170
>gi|26988814|ref|NP_744239.1| OmpF family protein [Pseudomonas putida KT2440]
gi|148548857|ref|YP_001268959.1| OmpF family protein [Pseudomonas putida F1]
gi|24983615|gb|AAN67703.1|AE016401_6 outer membrane protein OprF [Pseudomonas putida KT2440]
gi|148512915|gb|ABQ79775.1| OmpF family protein [Pseudomonas putida F1]
gi|313499790|gb|ADR61156.1| OprF [Pseudomonas putida BIRD-1]
Length = 344
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 4/138 (2%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD ++P + NL ++++
Sbjct: 203 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQ 262
Query: 79 H-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVY 136
+ ++EGH D +G + L RRA AV + + +SR+ YG+ P
Sbjct: 263 YPQTTTVVEGHTDSVGPDAYNQKLSERRANAVKQVLTQQYGVESSRVDSVGYGETRPVAD 322
Query: 137 GHDEDAYAKNRRAIVFLK 154
E+ A NRR ++
Sbjct: 323 NATEEGRAVNRRVEAQVE 340
>gi|300715167|ref|YP_003739970.1| OmpA family protein [Erwinia billingiae Eb661]
gi|299061003|emb|CAX58110.1| OmpA family protein [Erwinia billingiae Eb661]
Length = 412
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 50/130 (38%), Gaps = 4/130 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+ +Q ++ F ++S S+R +VL + + + L+ G++D +
Sbjct: 272 VAVKDEADQSVVTLKGDGLFTSASTSVRGRYEEVLDRIAQAMNNVNGRILVIGYSDNVPI 331
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
S+ L L RA +V R+K G+ P V + A+NRR
Sbjct: 332 RSARFASNYELSLARAQSVQERLQQHLSQPQRVKAEGRGESNPLVPNTTAENRARNRRVD 391
Query: 151 VFLKGCRANT 160
+ L NT
Sbjct: 392 ITLLVSPQNT 401
>gi|285017932|ref|YP_003375643.1| hypothetical protein XALc_1141 [Xanthomonas albilineans GPE PC73]
gi|283473150|emb|CBA15656.1| hypothetical protein XALc_1141 [Xanthomonas albilineans]
Length = 231
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 59/130 (45%), Gaps = 1/130 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGH 88
+ +T ++ + + ++ D + FD + +++P L+ + E + + GH
Sbjct: 102 TANTGIDVRRDGDNITLNLPDGITFDFNQSTLKPQFYSALNGVAKTLSEYNQTMIEVVGH 161
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D +GS + L +RA +V Y A+G+ R++ GK+ P E A+NRR
Sbjct: 162 TDNIGSDAVNQRLSEQRASSVAAYLTAQGVQPERIQTLGAGKKYPIADNSTEAGRAQNRR 221
Query: 149 AIVFLKGCRA 158
+ + R+
Sbjct: 222 VEIRVVPLRS 231
>gi|257459102|ref|ZP_05624221.1| outer membrane fibronectin-binding protein [Campylobacter gracilis
RM3268]
gi|257443487|gb|EEV18611.1| outer membrane fibronectin-binding protein [Campylobacter gracilis
RM3268]
Length = 340
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 56/131 (42%), Gaps = 2/131 (1%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKH 79
DN+D +P V+ + E+ + V F T S I P + + N+ +
Sbjct: 206 CDNVDRCPGTPAGVVVDEYGCEK-VIRLNLGVNFATDSSKISPEFMNQIKNVSDVLVAHP 264
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
D ++EGH D GS + L RRA AV + G+ ASR+ YG+ P
Sbjct: 265 DYKVILEGHTDSTGSNAYNQKLSERRAAAVGGALKSFGVDASRITTVGYGETKPIATNAT 324
Query: 140 EDAYAKNRRAI 150
+ A+NRR
Sbjct: 325 KAGRAQNRRVD 335
>gi|254447788|ref|ZP_05061253.1| OmpA family protein [gamma proteobacterium HTCC5015]
gi|198262568|gb|EDY86848.1| OmpA family protein [gamma proteobacterium HTCC5015]
Length = 225
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHAD 90
D+ ++ + + + ++ F T S + + VL ++ LE+ D + + GH D
Sbjct: 96 DSGVSVERDGDNINLIMPGNITFQTDSSDVSSSFYNVLDSVAIVLEEFDKTIVAVSGHTD 155
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + + L +RA +V +Y ++G+ R +V +G+ P E +NRR
Sbjct: 156 STGSDSYNQVLSEKRASSVASYLKSKGVLNERFEVIGFGEARPIADNSTESGREQNRRVE 215
Query: 151 VFL 153
+ L
Sbjct: 216 ITL 218
>gi|347163|gb|AAA62423.1| protein F [Pseudomonas fluorescens]
Length = 317
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 1/108 (0%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALG 102
V V FD ++P + NL ++ + + + GH D +G + L
Sbjct: 208 QVVRVELDVKFDFDKSVVKPNSYGDVKNLADFMAQYPATNVEVAGHTDSVGPDAYNQKLS 267
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
RRA AV V G++ SR+ YG+ P E A NRR
Sbjct: 268 QRRADAVKQVLVKDGVAPSRVTAVGYGESRPVADNATEAGRAVNRRVE 315
>gi|95930003|ref|ZP_01312743.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684]
gi|95133972|gb|EAT15631.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684]
Length = 176
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 44/174 (25%), Positives = 75/174 (43%), Gaps = 23/174 (13%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPD---------------------TVLNESS 39
M+ + L A+ ++ +G T+ + + V +
Sbjct: 1 MKTFK-LLCLFALILILAAGCAKPVTEDTGTEEACEVTEVAPTTEPVPSYTDSAVTETTP 59
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSS 98
E ++ V +V+F+ Y++ L+ +L+ + +IEGH DE GS +
Sbjct: 60 AVEPVAAPVLGTVYFEFDQYTLSAEARDTLAENMRYLQANPGTTLVIEGHCDERGSDEYN 119
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ALG RRA A Y + G++ R+ SYG+E P E+A+AKNRRA
Sbjct: 120 LALGERRAVAAQQYLTSMGVATDRLSTISYGEEKPVDMASTEEAWAKNRRAEFV 173
>gi|227114918|ref|ZP_03828574.1| peptidoglycan-associated outer membrane lipoprotein [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
Length = 170
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 56/169 (33%), Positives = 83/169 (49%), Gaps = 17/169 (10%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDTVLN------------ESSLQEQF 44
MQ++ + + L + + + S N D SS T N E + +
Sbjct: 1 MQFNKVLKGLMLALPVLAVAACSSNKNADNDQSSMGTAGNNGMMDGGNMSSSEQARLQMQ 60
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGL 103
+ V+F Y + Q+L ++L + IEGHADE G+ +IALG
Sbjct: 61 ELQRNNIVYFGLDKYDVSSEFAQMLDAHAAFLRSNPSYKVTIEGHADERGTPEYNIALGE 120
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
RRA AV Y +G+S+ ++ + SYGKE P+V GHDE AYAKNRRA++
Sbjct: 121 RRANAVQMYLQGKGVSSDQISIVSYGKEKPAVLGHDEAAYAKNRRAVLV 169
>gi|209522383|ref|ZP_03270996.1| OmpA/MotB domain protein [Burkholderia sp. H160]
gi|209497180|gb|EDZ97422.1| OmpA/MotB domain protein [Burkholderia sp. H160]
Length = 150
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 1/132 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF-L 84
+ + ++ SV FDTSSY+I+P+ VL L L+++
Sbjct: 13 SGATKGTGTQITEQPDGSLKLNIPSSVTFDTSSYTIKPSFAPVLDQLAQTLQQNPEVVAS 72
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+ GH D GS + L + RA +V Y RGI+ R+ T G P + E A
Sbjct: 73 VVGHTDSTGSLQYNQTLSVNRAESVTGYLTQRGIAPQRLSATGMGPNQPIADNNTEAGRA 132
Query: 145 KNRRAIVFLKGC 156
NRR ++L+
Sbjct: 133 ANRRVEIYLRAT 144
>gi|78221730|ref|YP_383477.1| surface antigen protein [Geobacter metallireducens GS-15]
gi|78192985|gb|ABB30752.1| OmpA/MotB:Rickettsia 17 kDa surface antigen [Geobacter
metallireducens GS-15]
Length = 218
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 54/136 (39%), Gaps = 4/136 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQEQ---FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LE 77
D + + + +S+Q + + + F +S ++P ++ + +
Sbjct: 78 DKQEQAMRQAVANVEGASIQRDQNVLAVTFKSDILFPINSAVLQPGANDEITRVAQVLTQ 137
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
I GH D GS + L RRA AV N ARG++ +RM +GK P
Sbjct: 138 YPATTITIAGHTDSTGSDALNQTLSERRATAVKNALAARGVAPARMNAIGFGKSKPIADN 197
Query: 138 HDEDAYAKNRRAIVFL 153
E + NRR + +
Sbjct: 198 STEAGRSMNRRVEITI 213
>gi|85704529|ref|ZP_01035631.1| hypothetical protein ROS217_05604 [Roseovarius sp. 217]
gi|85670937|gb|EAQ25796.1| hypothetical protein ROS217_05604 [Roseovarius sp. 217]
Length = 321
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 53/139 (38%), Gaps = 2/139 (1%)
Query: 18 ISGIDNLDTKISSPDTVLN-ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW- 75
I+ D + + E+ + S +++F +S + A +L +
Sbjct: 182 ITPTDKPAAAALEAEGDFSLEACVGRFDILSRTGNIYFKPASAQLDGASGPLLDAVAQIV 241
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
D I GH D GS ++ L RRA +V +Y R +S SR+ YG+ P
Sbjct: 242 TRCPDLTIQIAGHTDSFGSAAANQTLSERRAQSVVDYLATRDVSPSRLIALGYGETRPVA 301
Query: 136 YGHDEDAYAKNRRAIVFLK 154
E +NRR +
Sbjct: 302 DNSTEQGRRENRRIEFSIS 320
>gi|237741116|ref|ZP_04571597.1| outer membrane protein [Fusobacterium sp. 4_1_13]
gi|229430648|gb|EEO40860.1| outer membrane protein [Fusobacterium sp. 4_1_13]
Length = 144
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 2/129 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+LN + +E S+ FD +++P +L N+ ++E+++ + I+GH D +
Sbjct: 7 DILNSEAPKEMTIVLDERSLNFDFDKSNVKPQYYDLLKNIKEFVEQNNYEITIQGHTDSI 66
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIV 151
GS + L RRA +V + G++ R+ + + G+E P ++ A+NRR
Sbjct: 67 GSNAYNFKLSRRRAESVKAKLLEFGLAEDRIVGIEAMGEEQPIATNETKEGRAQNRRVEF 126
Query: 152 FLKGCRANT 160
L R NT
Sbjct: 127 KLV-QRENT 134
>gi|156072340|gb|ABU45492.1| OmpA family protein [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|302328072|gb|ADL27273.1| OmpA family protein [Fibrobacter succinogenes subsp. succinogenes
S85]
Length = 511
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 51/136 (37%), Gaps = 1/136 (0%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
+ D + Q V + V F++ +I L + +E
Sbjct: 371 LCPEQAESLNNYKDDDGCPDEVPQPPKKVFVLEGVNFESGKSTITQDSYISLMKVVDIME 430
Query: 78 KHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
F I GH D +G+++ ++ L RA AV N+ V +GI+ SRM G P
Sbjct: 431 TFPEATFEIVGHTDNIGNKDKNMTLSADRANAVKNFLVEKGIAESRMTTQGMGDTKPVAS 490
Query: 137 GHDEDAYAKNRRAIVF 152
+ A+NRR
Sbjct: 491 NKTPEGRAQNRRIEFI 506
>gi|91786221|ref|YP_547173.1| Type I secretion outer membrane protein TolC [Polaromonas sp.
JS666]
gi|91695446|gb|ABE42275.1| Type I secretion outer membrane protein, TolC [Polaromonas sp.
JS666]
Length = 607
Score = 86.4 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 1/131 (0%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-E 86
+ TV S+ FD +I+ L L L+ + D +I
Sbjct: 473 PRARATVAPAPGQALPAKISLSADTLFDFDKSTIKAGGTGKLDALVDRLKGVNVDVVIAV 532
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
GH D +G+ + L L RA +V Y V++G+ R++ G+ P + AKN
Sbjct: 533 GHTDSVGTDAYNQRLSLARADSVKAYLVSKGVDRQRIRTEGRGESQPVADNATAEGRAKN 592
Query: 147 RRAIVFLKGCR 157
RR + + R
Sbjct: 593 RRVDIEVVEAR 603
>gi|315922614|ref|ZP_07918854.1| predicted protein [Bacteroides sp. D2]
gi|313696489|gb|EFS33324.1| predicted protein [Bacteroides sp. D2]
Length = 405
Score = 86.0 bits (211), Expect = 1e-15, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 52/120 (43%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+ + D + F+ +I L + +++ + I+GH D +G
Sbjct: 286 VVAQKTIAGKTICAVDVINFEFGKSAINKNSYAYLDKIAMLMQRTNLSVEIKGHTDNVGK 345
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ ++ L +RA AV++Y + +G+ +S++ T YG P E+ NRR +K
Sbjct: 346 EDFNMELSRKRAKAVYDYLIKKGVGSSKLSYTYYGMTKPIASNDTEEGRLINRRVEFEIK 405
>gi|115353202|ref|YP_775041.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD]
gi|115283190|gb|ABI88707.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
Length = 243
Score = 86.0 bits (211), Expect = 1e-15, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 47/137 (34%), Gaps = 4/137 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFS---SSVGDSVFFDTSSYSIRPADIQVL-SNLGSWLE 77
++ P V+ E + + S F S ++ P+ Q L L E
Sbjct: 105 SVAPPVVAQPQPVVQAQPAAEPVAQRHVLLQGSANFAFDSAALTPSARQELDRFLDVNRE 164
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+ G+ D G+ ++ L RA AV Y G+ A G P
Sbjct: 165 ARFRRVTVTGYTDSQGAHAHNVRLSEARARAVATYLRTGGLHAEHFTTVGKGAAEPVASN 224
Query: 138 HDEDAYAKNRRAIVFLK 154
+ A+NRR + L+
Sbjct: 225 ATAEGRAQNRRVEIELE 241
>gi|237744199|ref|ZP_04574680.1| outer membrane protein [Fusobacterium sp. 7_1]
gi|256027684|ref|ZP_05441518.1| Outer membrane protein [Fusobacterium sp. D11]
gi|260494220|ref|ZP_05814351.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_33]
gi|289765644|ref|ZP_06525022.1| outer membrane protein [Fusobacterium sp. D11]
gi|229431428|gb|EEO41640.1| outer membrane protein [Fusobacterium sp. 7_1]
gi|260198366|gb|EEW95882.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_33]
gi|289717199|gb|EFD81211.1| outer membrane protein [Fusobacterium sp. D11]
Length = 212
Score = 86.0 bits (211), Expect = 1e-15, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 46/124 (37%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHA 89
T ++ V F + S +I L+ + + + G+
Sbjct: 85 QGTQAQVKKEGNALVINLPGGVTFASDSANISSGFYSALNGIAQSLNNYPETRIQVNGYT 144
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G + L RRA AV Y +A+G+S+SR+ +G P D +NRR
Sbjct: 145 DNTGKDAHNQELSQRRANAVAQYLIAQGVSSSRIIANGFGSSNPIASNSTPDGRLQNRRV 204
Query: 150 IVFL 153
+ +
Sbjct: 205 EIKI 208
>gi|34763092|ref|ZP_00144063.1| Outer membrane protein [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|27887226|gb|EAA24326.1| Outer membrane protein [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
Length = 202
Score = 86.0 bits (211), Expect = 1e-15, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHA 89
T ++ V F + S +I L+ + + + G+
Sbjct: 75 QGTQAQVRKDGNALVINLPGGVTFASDSANISSGFYSALNGIAQSLNNYPETRIQVNGYT 134
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G + L RRA AV Y +A+G++++R+ +G P ++ +NRR
Sbjct: 135 DNTGKDAHNQELSQRRANAVAQYLIAQGVASNRIVANGFGSSNPVASNSTQEGRLQNRRV 194
Query: 150 IVFL 153
+ +
Sbjct: 195 EIKI 198
>gi|221635437|ref|YP_002523313.1| chemotaxis protein MotB (Motility protein B) [Thermomicrobium
roseum DSM 5159]
gi|221157647|gb|ACM06765.1| chemotaxis protein MotB (Motility protein B) [Thermomicrobium
roseum DSM 5159]
Length = 237
Score = 86.0 bits (211), Expect = 1e-15, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 42/126 (33%), Gaps = 5/126 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
E + D++ F +RP +VL + + +E +EGH D
Sbjct: 104 QGAEVELTSEGIVIHLSDAILFPPGQAELRPEAQRVLDGIAAIIEPLPNPIRVEGHTDST 163
Query: 93 G----SRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
S + L RA Y G+ R+ YG+ P + KNR
Sbjct: 164 PPPPGSYPDNWELSAMRAVNTVRYLTDVAGLPPQRLSAAGYGEFRPRASNETVEGRRKNR 223
Query: 148 RAIVFL 153
R + +
Sbjct: 224 RVDIVI 229
>gi|190892542|ref|YP_001979084.1| outer membrane peptidoglycan-associated lipoprotein [Rhizobium etli
CIAT 652]
gi|190697821|gb|ACE91906.1| outer membrane peptidoglycan-associated lipoprotein [Rhizobium etli
CIAT 652]
gi|327192440|gb|EGE59397.1| outer membrane peptidoglycan-associated lipoprotein [Rhizobium etli
CNPAF512]
Length = 221
Score = 86.0 bits (211), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++ FD +++P L+++ L K + + GH D
Sbjct: 93 GTGISVTRNGDNIILNMPSNITFDVDQDAVKPGFYPTLNSVAIVLRKFNRTLIDVNGHTD 152
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + L RRA +V +Y +GI R+ +G P E A+NRR
Sbjct: 153 STGSLQHNQDLSQRRALSVADYLGGQGIDQRRVSAVGFGPSQPVASNASEAGRAQNRRVE 212
Query: 151 VFL 153
+ +
Sbjct: 213 IQI 215
>gi|71901734|ref|ZP_00683806.1| OmpA/MotB [Xylella fastidiosa Ann-1]
gi|182681496|ref|YP_001829656.1| peptidoglycan-associated lipoprotein [Xylella fastidiosa M23]
gi|71728506|gb|EAO30665.1| OmpA/MotB [Xylella fastidiosa Ann-1]
gi|182631606|gb|ACB92382.1| peptidoglycan-associated lipoprotein [Xylella fastidiosa M23]
Length = 179
Score = 86.0 bits (211), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/175 (21%), Positives = 69/175 (39%), Gaps = 23/175 (13%)
Query: 1 MQYSTIFIILSAITMMSISGIDNL----------------------DTKISSPDTVLNES 38
M ST F+++S ++ ++ + + L +
Sbjct: 1 MNNSTRFLLISLLSTSALVACSKKVKEQPHVPVKPMAPTVSTPTPPTATAPTDSSGLYTA 60
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNS 97
+ + + V+FD ++ VLS + + ++G+ DE GSR
Sbjct: 61 ADLDTDACLRQRVVYFDFDKDDVKKEFQTVLSCHAKYLRNRPSAHITLQGNTDERGSREY 120
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+IALG RR +V A G S+ ++ V SYG+E P E +++NRR +
Sbjct: 121 NIALGERRGNSVLYSLQANGASSGQLNVVSYGEERPVCTESTESCWSRNRRVEIV 175
>gi|332704885|ref|ZP_08424973.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay]
gi|332555034|gb|EGJ52078.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay]
Length = 222
Score = 86.0 bits (211), Expect = 1e-15, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHA 89
T ++ + + ++ +V FDT S I+P +VL+++ L++++ + GH
Sbjct: 93 QGTGVSVTRQGDMIILNMPGNVTFDTGSAGIKPQFFEVLNSVAIVLKEYEKTYVDVLGHT 152
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GS N ++ L RA +V Y +++G+ R V G P ++NRR
Sbjct: 153 DSTGSMNLNMRLSQDRAQSVAQYLISQGVQQERFLVRGMGPNQPIADNSTAAGRSQNRRV 212
Query: 150 IVFL 153
+ L
Sbjct: 213 EIKL 216
>gi|311106780|ref|YP_003979633.1| OmpA family protein 1 [Achromobacter xylosoxidans A8]
gi|310761469|gb|ADP16918.1| OmpA family protein 1 [Achromobacter xylosoxidans A8]
Length = 183
Score = 86.0 bits (211), Expect = 1e-15, Method: Composition-based stats.
Identities = 25/179 (13%), Positives = 61/179 (34%), Gaps = 28/179 (15%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG----------- 49
M+ + + A M+++SG T ++L ++ ++ +
Sbjct: 1 MKPGK--LAVMACLMLAVSGCVTKKTYDKEAQMAAEYAALNQKLTAELSGDRAQITQLQN 58
Query: 50 -------DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGS------- 94
+ + F + + P Q L+ + +++G+ D
Sbjct: 59 ELKVTMVNEILFPEGGWRLSPKGEQTLAKIAPTLSNLPGQQVVVQGYTDNEPIGPELRSQ 118
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S++ L RA V + ++G+ + + +G+ P A+NRR + +
Sbjct: 119 FPSNLELSSARADNVARFLTSKGVPPNSISAQGFGEARPVASNSTPQGKAQNRRVEIVI 177
>gi|17547099|ref|NP_520501.1| hypothetical protein RSc2380 [Ralstonia solanacearum GMI1000]
gi|17429400|emb|CAD16087.1| probable bacterial outer membrane transmembrane protein [Ralstonia
solanacearum GMI1000]
Length = 209
Score = 86.0 bits (211), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 60/140 (42%), Gaps = 1/140 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
I + T ++ ++ V FDT S I+P+ L ++ +
Sbjct: 70 AIKSKLTGDTAGTGTQISEQPDGSLKLNIPSQVSFDTDSAVIKPSFRGPLDSVAETLSQH 129
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ + GH D G+ N +++L RRA +V +Y RG++ +RM G+ P
Sbjct: 130 PELAANVVGHTDSTGNPNYNMSLSQRRAQSVASYLTDRGVARNRMSAEGRGQTQPVGDNA 189
Query: 139 DEDAYAKNRRAIVFLKGCRA 158
E A+NRR ++LK +
Sbjct: 190 TEAGRAQNRRVEIYLKPIQG 209
>gi|292492509|ref|YP_003527948.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4]
gi|291581104|gb|ADE15561.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4]
Length = 243
Score = 86.0 bits (211), Expect = 1e-15, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 1/115 (0%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADELGSRNSSI 99
E + V FD S S++ A + L + L+K++ + + GH D GS ++
Sbjct: 109 DESLKLDIPSEVSFDHDSASLKQAFLPTLDKIADVLKKYNKTVVHVIGHTDSTGSEEYNL 168
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L +RRA V Y +G+ + R+ + G+ P NRR + LK
Sbjct: 169 DLSVRRAANVAVYLEQKGVPSPRLSIYGEGESQPRASNDTAAGRQLNRRVEIILK 223
>gi|269103007|ref|ZP_06155704.1| peptidoglycan-associated outer membrane lipoprotein [Photobacterium
damselae subsp. damselae CIP 102761]
gi|268162905|gb|EEZ41401.1| peptidoglycan-associated outer membrane lipoprotein [Photobacterium
damselae subsp. damselae CIP 102761]
Length = 181
Score = 86.0 bits (211), Expect = 1e-15, Method: Composition-based stats.
Identities = 54/173 (31%), Positives = 82/173 (47%), Gaps = 21/173 (12%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD------------ 50
++ I L +T+ + S + ++ + + S + + S+ D
Sbjct: 7 LKSLAIALPLMTLAACSSTEGTNSSAADQTAGGSSSMVDQGAISTPVDGGNGSMSEQEIR 66
Query: 51 --------SVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIAL 101
+VFF + I+P +L +L H +IEGHADE G+ +IAL
Sbjct: 67 NQQLRQETTVFFKFDNAEIQPEYQAMLEAHAEYLRDHPAVKVIIEGHADERGTPEYNIAL 126
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G RRA AV Y A G+ AS+M + SYG+E P V GH + YAKNRRA++ K
Sbjct: 127 GERRAAAVVKYLQALGVPASQMSIVSYGEEKPLVLGHTDADYAKNRRAVLVYK 179
>gi|261855938|ref|YP_003263221.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
gi|261836407|gb|ACX96174.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
Length = 207
Score = 86.0 bits (211), Expect = 1e-15, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 65/149 (43%), Gaps = 2/149 (1%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL 72
+M+ K ++P ++ E + ++ +FD Y+++PA + L L
Sbjct: 59 TAIMACDPDMIAKPKEAAPAALVEPPPAPEMKTVTLTADTYFDFDKYNLKPAGKEALDKL 118
Query: 73 GSWLEKHD--CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
S + + + G+ D +G+ +I L RRA V Y A I A +++ G+
Sbjct: 119 ISEMGDMNSIAKIKVVGYTDSIGTEKYNIGLSERRANTVAKYLTAHNIPADKIETQGMGE 178
Query: 131 EMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
P ++ AKNRR +V +G +N
Sbjct: 179 ADPVASNKTKEGRAKNRRVVVTTEGVSSN 207
>gi|192359273|ref|YP_001981784.1| outer membrane protein A [Cellvibrio japonicus Ueda107]
gi|190685438|gb|ACE83116.1| outer membrane protein A [Cellvibrio japonicus Ueda107]
Length = 344
Score = 86.0 bits (211), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 1/105 (0%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F+ + IR + LE + GH D GS + L RA V Y
Sbjct: 236 LFEFNKSEIRNTAAIQ-PVIDVLLEDPSLYVNVIGHTDSKGSEEYNQRLSQTRANVVAKY 294
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
++G+S SR+KV G++ P E+ A+NRR + +
Sbjct: 295 LNSKGVSLSRIKVFGMGEDQPVADNSTEEGRAQNRRVEFIISNSQ 339
>gi|145640334|ref|ZP_01795918.1| scaffold protein [Haemophilus influenzae R3021]
gi|145274920|gb|EDK14782.1| scaffold protein [Haemophilus influenzae 22.4-21]
Length = 153
Score = 86.0 bits (211), Expect = 1e-15, Method: Composition-based stats.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 3/151 (1%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSI 61
++ ++ ++ ++ N D + S+ + ++V+F Y I
Sbjct: 3 KFVKSLLVAGSVAALAACSSSNNDAAGNGAAQTFGGYSVAD--LQQRYNTVYFGFDKYDI 60
Query: 62 RPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA 120
+Q+L + L+EG+ DE G+ +IALG RRA AV Y +G+ A
Sbjct: 61 TGEYVQILDAHAAYLNATPAAKVLVEGNTDERGTPEYNIALGQRRADAVKGYLTGKGVDA 120
Query: 121 SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
++ SYG+E P+V GHDE AY+KNRRA++
Sbjct: 121 GKLGTVSYGEEKPAVLGHDEAAYSKNRRAVL 151
>gi|300723714|ref|YP_003713021.1| putative outer membrane protein [Xenorhabdus nematophila ATCC
19061]
gi|297630238|emb|CBJ90889.1| putative outer membrane protein [Xenorhabdus nematophila ATCC
19061]
Length = 161
Score = 86.0 bits (211), Expect = 1e-15, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 56/156 (35%), Gaps = 4/156 (2%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNES---SLQEQFSSSVGDSVFFDTSS 58
+ + + + I + +S N + T L + E + + + V F +
Sbjct: 3 KKRSFMFVCTFIGTLFLSACQNKGGLTAEQITTLKQQGFQQTDEGWLFGMSEKVLFGNNQ 62
Query: 59 YSIRPADIQVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARG 117
+RP L L S L K ++GH D G + + L L+RA V + G
Sbjct: 63 SHLRPEGEAKLKELASVLSKVGIHHARLDGHTDNYGEVSYNNQLSLKRANTVADALTDGG 122
Query: 118 ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ + + G P A+NRR + +
Sbjct: 123 MQRANLTTRGLGPSQPIADNRSSKGRAENRRVAIVI 158
>gi|170750721|ref|YP_001756981.1| peptidoglycan-associated lipoprotein [Methylobacterium
radiotolerans JCM 2831]
gi|170657243|gb|ACB26298.1| peptidoglycan-associated lipoprotein [Methylobacterium
radiotolerans JCM 2831]
Length = 164
Score = 86.0 bits (211), Expect = 1e-15, Method: Composition-based stats.
Identities = 51/142 (35%), Positives = 73/142 (51%), Gaps = 2/142 (1%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LE 77
D S+ + F ++GD VFF++ S + P L +W
Sbjct: 23 CSNDKDLADASAFGAGAATPGSAQDFVVNIGDRVFFESDSTDLTPTATATLDKQAAWLQR 82
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
F+IEGHADE G+R + +LG RRA AV +Y RGI+ASRM+ SYGKE P
Sbjct: 83 YPRYTFIIEGHADERGTREYNFSLGARRAQAVNDYLATRGIAASRMRTVSYGKERPVAVC 142
Query: 138 HDEDAYAKNRRAIVFL-KGCRA 158
+D +++NRRA++ L +G A
Sbjct: 143 NDISCWSQNRRAVIVLDRGAGA 164
>gi|294672984|ref|YP_003573600.1| OmpA family protein [Prevotella ruminicola 23]
gi|294473810|gb|ADE83199.1| OmpA family protein [Prevotella ruminicola 23]
Length = 374
Score = 86.0 bits (211), Expect = 1e-15, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 53/127 (41%), Gaps = 2/127 (1%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLI 85
+ + D E ++ E V +++ F+T +++P ++ + + +++K+ F +
Sbjct: 247 QRQTTDLSAVEKAIAE-TGKFVTNNILFETGKATLKPESMEEIQKVADYMKKNPSVRFEV 305
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+GH D GS + L +RA AV G ++ G P + A+
Sbjct: 306 QGHTDNQGSDKINDPLSQQRAEAVVKALAQLGCDEFNLRAVGKGSHEPVADNKTDAGRAQ 365
Query: 146 NRRAIVF 152
NRR
Sbjct: 366 NRRVEFI 372
>gi|315126277|ref|YP_004068280.1| required for outer membrane integrity, uptake of group A colicins,
and translocation of phage DNA [Pseudoalteromonas sp.
SM9913]
gi|315014791|gb|ADT68129.1| required for outer membrane integrity, uptake of group A colicins,
and translocation of phage DNA [Pseudoalteromonas sp.
SM9913]
Length = 179
Score = 86.0 bits (211), Expect = 1e-15, Method: Composition-based stats.
Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 26/178 (14%)
Query: 1 MQYSTIF---------IILSAITMMS----------------ISGIDNLDTKISSPDTVL 35
MQ + I + L+A + S + D ++ +P+
Sbjct: 1 MQLNKILKGLLIAVPVMTLAACSSSSDIDENAANQSNQATVEQTTTDTVEVATMTPEQQA 60
Query: 36 NESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGS 94
E Q+ + ++FD ++ +L + ++ LIEGHADE G+
Sbjct: 61 EEQLRQKYEALRQEQIIYFDFDKATVESKYADLLRAHAEFLVKNPSVKVLIEGHADERGT 120
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+IALG R AV Y + G+SAS+M V SYG+E P V E A+AKNRRA++
Sbjct: 121 PEYNIALGEHRGQAVEKYLQSLGVSASQMSVVSYGEEKPMVKTRTEAAFAKNRRAVLV 178
>gi|296128006|ref|YP_003635256.1| OmpA/MotB domain protein [Cellulomonas flavigena DSM 20109]
gi|296019821|gb|ADG73057.1| OmpA/MotB domain protein [Cellulomonas flavigena DSM 20109]
Length = 560
Score = 86.0 bits (211), Expect = 1e-15, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 2/131 (1%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DF 83
++ + D + E+ ++G V F S + P ++ + L + +
Sbjct: 242 ESTTAELDGAVQTIESTEKVEVTLGSDVLFAFDSADLTPESADAVALVAQRLAEREAGSV 301
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDA 142
+ GH D+ ++ L RRA AV + A+ + RM+V G+ P V E+
Sbjct: 302 EVVGHTDDQADDTYNLDLSRRRAQAVADALEAQVAGSGHRMRVAGRGESEPVVPNDSEEN 361
Query: 143 YAKNRRAIVFL 153
A NRR V L
Sbjct: 362 RALNRRVTVSL 372
>gi|86358413|ref|YP_470305.1| outer membrane lipoprotein [Rhizobium etli CFN 42]
gi|86282515|gb|ABC91578.1| outer membrane lipoprotein [Rhizobium etli CFN 42]
Length = 221
Score = 86.0 bits (211), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++ FD +++P L+++ L K + + GH D
Sbjct: 93 GTGISVTRNGDNIILNMPSNITFDVDQDAVKPGFYPTLNSVAIVLRKFNRTLIDVNGHTD 152
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + L RRA +V +Y +GI R+ +G P E A+NRR
Sbjct: 153 STGSLQHNQDLSQRRALSVADYLGGQGIDQRRVSAVGFGPSQPVASNASEAGRAQNRRVE 212
Query: 151 VFL 153
+ +
Sbjct: 213 IQI 215
>gi|242238603|ref|YP_002986784.1| peptidoglycan-associated outer membrane lipoprotein [Dickeya
dadantii Ech703]
gi|242130660|gb|ACS84962.1| peptidoglycan-associated lipoprotein [Dickeya dadantii Ech703]
Length = 168
Score = 86.0 bits (211), Expect = 1e-15, Method: Composition-based stats.
Identities = 55/167 (32%), Positives = 85/167 (50%), Gaps = 15/167 (8%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDT----------VLNESSLQEQFSS 46
MQ++ + + L + + + S + + SS + E + +
Sbjct: 1 MQFNKVLKGLMLALPVLAVAACSSNKHANNDQSSLNGGAGLENGGNMSSAEQARLQMQEL 60
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRR 105
+ V+FD Y IRP Q+L ++L + +EGHADE G+ +IALG RR
Sbjct: 61 QRNNIVYFDLDKYDIRPDFAQMLDAHAAFLRSNPSYKVTVEGHADERGTPEYNIALGERR 120
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
A AV Y +G+SA ++ V SYGKE P+V GHDE A++KNRRA++
Sbjct: 121 ANAVQMYLQGKGVSADQISVVSYGKEKPAVLGHDEAAWSKNRRAVLV 167
>gi|241205517|ref|YP_002976613.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240859407|gb|ACS57074.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 221
Score = 86.0 bits (211), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++ FD +++P L+++ L K + + GH D
Sbjct: 93 GTGISVTRNGDNIILNMPSNITFDVDQDAVKPGFYPTLNSVAIVLRKFNRTLIDVNGHTD 152
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + L RRA +V +Y +GI R+ +G P E A+NRR
Sbjct: 153 STGSLQHNQDLSQRRALSVADYLGGQGIDQRRVSAVGFGPSQPVASNASEAGRAQNRRVE 212
Query: 151 VFL 153
+ +
Sbjct: 213 IQI 215
>gi|115352534|ref|YP_774373.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD]
gi|115282522|gb|ABI88039.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
Length = 232
Score = 86.0 bits (211), Expect = 1e-15, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 54/136 (39%), Gaps = 1/136 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
I N ++ +V SV F T+ Y+I PA +L++L + +
Sbjct: 91 AIKNKLAPSAAQTGTQVTEQPDGSLKLNVPSSVTFATNQYAITPAFTPLLNDLATTLNQN 150
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ G+ D GS + L RA +V N RG++ R+ G P
Sbjct: 151 PQLTGSVIGYTDSTGSAQLNQTLSQNRAQSVVNALAQRGVAGGRLSAQGMGPSNPIADNA 210
Query: 139 DEDAYAKNRRAIVFLK 154
E A+NRR ++L+
Sbjct: 211 TEAGRAQNRRVEIYLR 226
>gi|296188354|ref|ZP_06856746.1| putative chemotaxis protein MotB [Clostridium carboxidivorans P7]
gi|296047480|gb|EFG86922.1| putative chemotaxis protein MotB [Clostridium carboxidivorans P7]
Length = 277
Score = 86.0 bits (211), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 55/137 (40%), Gaps = 4/137 (2%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ + + + S+ D++FF+T + A L +G L + D IE
Sbjct: 101 QKNGMQNSVTTEVDERGLVVSLRDTLFFETGKAEVIAASQGKLVEIGKILNQLDNTMRIE 160
Query: 87 GHADELGSRNSS----IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
GH D + N L RA V +A G+ ++ +YG+ P + ED
Sbjct: 161 GHTDNVPIHNEQFSDNWQLSSARALNVTELLIANGVPPKKLSSVAYGEYRPVLDNSTEDG 220
Query: 143 YAKNRRAIVFLKGCRAN 159
A+NRR + + + N
Sbjct: 221 RARNRRVDIIVVSNKYN 237
>gi|119472020|ref|ZP_01614278.1| putative lipoprotein [Alteromonadales bacterium TW-7]
gi|119445155|gb|EAW26447.1| putative lipoprotein [Alteromonadales bacterium TW-7]
Length = 210
Score = 86.0 bits (211), Expect = 1e-15, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 50/124 (40%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHA 89
+ + + + ++ F T I L+ + + K++ +EGH
Sbjct: 81 AGSGVEVVREGDNLRLVIPSNITFATDQSYISTGFNDTLNAIAKVMNKYEKTYLSVEGHT 140
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G + ++ L RA +V Y + I A+R+ + +G+ P + A+NRR
Sbjct: 141 DSTGQDSYNMNLSRERAQSVKAYLANQDIMAARISTSGFGETRPIATNDTANGRAQNRRV 200
Query: 150 IVFL 153
+ +
Sbjct: 201 EIQI 204
>gi|53720375|ref|YP_109361.1| OmpA family lipoprotein [Burkholderia pseudomallei K96243]
gi|53725632|ref|YP_103661.1| OmpA family outer membrane protein [Burkholderia mallei ATCC 23344]
gi|67643927|ref|ZP_00442670.1| outer membrane lipoprotein [Burkholderia mallei GB8 horse 4]
gi|76810557|ref|YP_334629.1| OmpA family outer membrane protein [Burkholderia pseudomallei
1710b]
gi|121601549|ref|YP_992166.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
mallei SAVP1]
gi|124383503|ref|YP_001028612.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
mallei NCTC 10229]
gi|126440722|ref|YP_001060216.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei 668]
gi|126451181|ref|YP_001081487.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
mallei NCTC 10247]
gi|126454443|ref|YP_001067480.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei 1106a]
gi|134280344|ref|ZP_01767055.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei 305]
gi|166998277|ref|ZP_02264137.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
mallei PRL-20]
gi|167720991|ref|ZP_02404227.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei DM98]
gi|167739948|ref|ZP_02412722.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei 14]
gi|167817185|ref|ZP_02448865.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei 91]
gi|167825598|ref|ZP_02457069.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei 9]
gi|167847082|ref|ZP_02472590.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei B7210]
gi|167895666|ref|ZP_02483068.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei 7894]
gi|167904059|ref|ZP_02491264.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei NCTC 13177]
gi|167912316|ref|ZP_02499407.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei 112]
gi|167920273|ref|ZP_02507364.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei BCC215]
gi|217420588|ref|ZP_03452093.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei 576]
gi|226194168|ref|ZP_03789767.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei Pakistan 9]
gi|237813606|ref|YP_002898057.1| outer membrane lipoprotein [Burkholderia pseudomallei MSHR346]
gi|242315175|ref|ZP_04814191.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei 1106b]
gi|254175608|ref|ZP_04882268.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
mallei ATCC 10399]
gi|254180823|ref|ZP_04887421.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei 1655]
gi|254191661|ref|ZP_04898164.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei Pasteur 52237]
gi|254194825|ref|ZP_04901255.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei S13]
gi|254202358|ref|ZP_04908721.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
mallei FMH]
gi|254207692|ref|ZP_04914042.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
mallei JHU]
gi|254258391|ref|ZP_04949445.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei 1710a]
gi|254356406|ref|ZP_04972682.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
mallei 2002721280]
gi|52210789|emb|CAH36773.1| putative OmpA family lipoprotein [Burkholderia pseudomallei K96243]
gi|52429055|gb|AAU49648.1| outer membrane protein, OmpA family [Burkholderia mallei ATCC
23344]
gi|76580010|gb|ABA49485.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
1710b]
gi|121230359|gb|ABM52877.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
mallei SAVP1]
gi|124291523|gb|ABN00792.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
mallei NCTC 10229]
gi|126220215|gb|ABN83721.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei 668]
gi|126228085|gb|ABN91625.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei 1106a]
gi|126244051|gb|ABO07144.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
mallei NCTC 10247]
gi|134248351|gb|EBA48434.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei 305]
gi|147746605|gb|EDK53682.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
mallei FMH]
gi|147751586|gb|EDK58653.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
mallei JHU]
gi|148025403|gb|EDK83557.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
mallei 2002721280]
gi|157939332|gb|EDO95002.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei Pasteur 52237]
gi|160696652|gb|EDP86622.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
mallei ATCC 10399]
gi|169651574|gb|EDS84267.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei S13]
gi|184211362|gb|EDU08405.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei 1655]
gi|217396000|gb|EEC36017.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei 576]
gi|225933633|gb|EEH29621.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei Pakistan 9]
gi|237502905|gb|ACQ95223.1| outer membrane lipoprotein [Burkholderia pseudomallei MSHR346]
gi|238525396|gb|EEP88824.1| outer membrane lipoprotein [Burkholderia mallei GB8 horse 4]
gi|242138414|gb|EES24816.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei 1106b]
gi|243065357|gb|EES47543.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
mallei PRL-20]
gi|254217080|gb|EET06464.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei 1710a]
Length = 170
Score = 86.0 bits (211), Expect = 1e-15, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 15/167 (8%)
Query: 1 MQYSTIFIILSAITMMSISGIDNL----------DTKISSPDTVLNESSLQEQFSSS--- 47
M + + + + + +++ + D + P+ + +
Sbjct: 1 MMSKKLRLAFAMLMIGALAACKSGVKLDEHANQGDAVSTQPNPENVAQVTVDPLNDPNSP 60
Query: 48 -VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRR 105
SV+FD SYS++ +L +L+ H LI+G+ DE G+ ++ALG +R
Sbjct: 61 LAKRSVYFDFDSYSVQDQYQALLQQHAQYLKSHPQRHILIQGNTDERGTSEYNLALGQKR 120
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
A AV G+ ++M+ S GKE P GHDE ++A+NRRA +
Sbjct: 121 AEAVRRALSLLGVGDAQMEAVSLGKEKPVALGHDEASWAQNRRADLV 167
>gi|28198797|ref|NP_779111.1| outer membrane protein P6 precursor [Xylella fastidiosa Temecula1]
gi|28056888|gb|AAO28760.1| outer membrane protein P6 precursor [Xylella fastidiosa Temecula1]
Length = 187
Score = 86.0 bits (211), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/175 (21%), Positives = 69/175 (39%), Gaps = 23/175 (13%)
Query: 1 MQYSTIFIILSAITMMSISGIDNL----------------------DTKISSPDTVLNES 38
M ST F+++S ++ ++ + + L +
Sbjct: 9 MNNSTRFLLISLLSTSALVACSKKVKEQPHVPVKPMAPTVSTPTPPTATAPTDSSGLYTA 68
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNS 97
+ + + V+FD ++ VLS + + ++G+ DE GSR
Sbjct: 69 ADLDTDACLRQRVVYFDFDKDDVKKEFQTVLSCHAKYLRNRPSAHITLQGNTDERGSREY 128
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+IALG RR +V A G S+ ++ V SYG+E P E +++NRR +
Sbjct: 129 NIALGERRGNSVLYSLQANGASSGQLNVVSYGEERPVCTESTESCWSRNRRVEIV 183
>gi|299134013|ref|ZP_07027206.1| OmpA/MotB domain protein [Afipia sp. 1NLS2]
gi|298590760|gb|EFI50962.1| OmpA/MotB domain protein [Afipia sp. 1NLS2]
Length = 464
Score = 86.0 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 3/138 (2%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSV--GDSVFFDTSSYSIRPADIQVLSNLGSWL- 76
G P +++ +Q + + ++ F+T I P +L L +
Sbjct: 327 GWKQKAELTVKPVAAPVNATICQQLLTGLLAKGTIQFETGKAVIDPDSAGLLDRLIEAVL 386
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
IEGH D G + +++AL +RRA AV +YF+ G+ R+ +G E P
Sbjct: 387 RCPTSQIEIEGHTDSNGEKEANLALSMRRAQAVADYFIKAGVPKERISAVGFGSERPVAS 446
Query: 137 GHDEDAYAKNRRAIVFLK 154
E+ A+NRR ++
Sbjct: 447 NDTEEGKAQNRRIEFVVR 464
>gi|294637420|ref|ZP_06715711.1| peptidoglycan-associated lipoprotein [Edwardsiella tarda ATCC
23685]
gi|291089413|gb|EFE21974.1| peptidoglycan-associated lipoprotein [Edwardsiella tarda ATCC
23685]
Length = 170
Score = 86.0 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 51/169 (30%), Positives = 77/169 (45%), Gaps = 17/169 (10%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDTVLNE------------SSLQEQF 44
MQ + + ++L + + + S N + S N + +
Sbjct: 1 MQLNKVLKGLMLVLPIMAVAACSSKKNTNDDQSGMGVGANGMENSSSNLSSEEQARLQMQ 60
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIALGL 103
+ V+F Y + P +Q L + +EGH DE G+ +IALG
Sbjct: 61 ELQKNNIVYFGLDKYDVTPEYMQELDAHAAFLRNNPSYKVTVEGHTDERGTPEYNIALGE 120
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
RRA AV Y +G+SA ++ + SYGKE P+V GHDE AYAKNRRA++
Sbjct: 121 RRANAVKMYLQGKGVSADQIDIVSYGKEKPAVLGHDEAAYAKNRRAVLV 169
>gi|255321985|ref|ZP_05363135.1| OmpA family protein [Campylobacter showae RM3277]
gi|255301089|gb|EET80356.1| OmpA family protein [Campylobacter showae RM3277]
Length = 192
Score = 86.0 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/172 (24%), Positives = 80/172 (46%), Gaps = 19/172 (11%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKIS-------------SPDTVLNESSLQEQFSSS 47
M+ + + +AI + +SG + + ++ S D ++++S +Q SS
Sbjct: 19 MKMKKVVLTSAAIAALLLSGCSSKNPEVDMSADANQNMGGMNSSDNMMSDSERLQQLISS 78
Query: 48 VG---DSVFFDTSSYSIRPADIQVLSNLG---SWLEKHDCDFLIEGHADELGSRNSSIAL 101
+ +V+FD ++I+ ++ + E +EG+ DE G+ + AL
Sbjct: 79 IEGQVQTVYFDFDKFNIKGDMQSAINTNAGLFNQSEAQALSVKVEGNCDEWGTDEYNYAL 138
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
GL+RA A + V +G++A R+ V SYG+ P + A+NRRA +
Sbjct: 139 GLKRAKAAKDALVKQGVAADRITVVSYGESNPVCTDKTKACDAQNRRAEFKV 190
>gi|154250728|ref|YP_001411552.1| OmpA/MotB domain-containing protein [Parvibaculum lavamentivorans
DS-1]
gi|154154678|gb|ABS61895.1| OmpA/MotB domain protein [Parvibaculum lavamentivorans DS-1]
Length = 224
Score = 86.0 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 55/124 (44%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
+ ++ + + ++ +V F T+S I VL+++ L+++D + GH D
Sbjct: 96 ASGVSVTRVGNDIILNMPGNVTFATNSSDINAKFYDVLNSVAIVLKEYDKTLIDVTGHTD 155
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS ++ L +RA +V +Y + + + + R + G+ P +NRR
Sbjct: 156 STGSDQYNLELSQKRAQSVASYLIGQSVDSRRFYIVGAGESQPIATNDTPQGREQNRRVE 215
Query: 151 VFLK 154
+ L
Sbjct: 216 IRLS 219
>gi|165975761|ref|YP_001651354.1| peptidoglycan-associated outer membrane lipoprotein [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|190149578|ref|YP_001968103.1| outer membrane protein precursor PalA [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|303249536|ref|ZP_07335743.1| peptidoglycan-associated outer membrane lipoprotein [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|303252546|ref|ZP_07338709.1| peptidoglycan-associated outer membrane lipoprotein [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|307245117|ref|ZP_07527210.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307247296|ref|ZP_07529344.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307251837|ref|ZP_07533738.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307254073|ref|ZP_07535920.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307256332|ref|ZP_07538115.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|307258528|ref|ZP_07540265.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|307260771|ref|ZP_07542458.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|307262897|ref|ZP_07544521.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|322514835|ref|ZP_08067854.1| peptidoglycan-associated lipoprotein [Actinobacillus ureae ATCC
25976]
gi|1405436|emb|CAA61413.1| PALA outer membrane protein precursor [Actinobacillus
pleuropneumoniae]
gi|165875862|gb|ABY68910.1| peptidoglycan-associated outer membrane lipoprotein [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|189914709|gb|ACE60961.1| outer membrane protein precursor PalA [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|302648514|gb|EFL78707.1| peptidoglycan-associated outer membrane lipoprotein [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|302651610|gb|EFL81759.1| peptidoglycan-associated outer membrane lipoprotein [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306854006|gb|EFM86218.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306856140|gb|EFM88295.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306860529|gb|EFM92541.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306862998|gb|EFM94945.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306865158|gb|EFM97058.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306867432|gb|EFM99283.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306869497|gb|EFN01287.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306871802|gb|EFN03522.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|322119217|gb|EFX91358.1| peptidoglycan-associated lipoprotein [Actinobacillus ureae ATCC
25976]
Length = 152
Score = 86.0 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 78/152 (51%), Gaps = 3/152 (1%)
Query: 1 MQYSTIFIILSA-ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSY 59
M+ ++++A +++ + + ++ + + + ++V+F SY
Sbjct: 1 MKKLAKVLMIAAPAFVLAACSSSSDNANANANANAGQFGGMTAEDLQTRYNTVYFGFDSY 60
Query: 60 SIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
++ Q+L ++L + + GHADE G+ +IALG RRA AV NY +
Sbjct: 61 AVEGEYQQLLDAHAAYLTSANGKVTVAGHADERGTPEYNIALGQRRADAVKNYLATK--G 118
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
A+++ SYG+E P+V GH E YAKNRRA++
Sbjct: 119 ANQVSTVSYGEEKPAVLGHTEADYAKNRRAVL 150
>gi|21242231|ref|NP_641813.1| OmpA family protein [Xanthomonas axonopodis pv. citri str. 306]
gi|21107654|gb|AAM36349.1| OmpA family protein [Xanthomonas axonopodis pv. citri str. 306]
Length = 241
Score = 86.0 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 1/130 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGH 88
+ +T + + + ++ D + FD +++P L+ + S E + + GH
Sbjct: 102 TANTGIEVQRQGDNITLNLPDGITFDFGKSALKPQFYSALNGVASTLREYNQTMVEVVGH 161
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D +GS + L RA AV Y A+G+ RM+ GK P + A+NRR
Sbjct: 162 TDSVGSDAVNQRLSEERAGAVAQYLTAQGVQRERMETMGAGKRYPIADNSTDAGRAQNRR 221
Query: 149 AIVFLKGCRA 158
+ L RA
Sbjct: 222 VEIRLIPLRA 231
>gi|269959951|ref|ZP_06174328.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269835250|gb|EEZ89332.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 326
Score = 86.0 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 1/101 (0%)
Query: 54 FDTSSYSIRPADIQVL-SNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F+ S ++ + + L + + E I G+ D G + L RRA +V +Y
Sbjct: 214 FEFDSATLTDSVSERLDNFVNFLNEYPQAQVEITGYTDSSGPAAYNQKLSERRAQSVADY 273
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+A GI A R V G+E P + KNRR V +
Sbjct: 274 LIAAGIDADRFTVKGMGEENPVADNSTHEGREKNRRVEVVV 314
>gi|258621416|ref|ZP_05716450.1| peptidoglycan-associated lipoprotein [Vibrio mimicus VM573]
gi|258586804|gb|EEW11519.1| peptidoglycan-associated lipoprotein [Vibrio mimicus VM573]
Length = 173
Score = 86.0 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 20/172 (11%)
Query: 1 MQYST----IFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQ--------------- 41
MQ + + I L + + + S D+ S S++
Sbjct: 1 MQLNKVLKGLLIALPVLAVTACSSSDDAANASGSQTNQSAVSTVDSNGLNAQGQLTEQEL 60
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIA 100
++ + +++F + +I +L+ + ++ IEGHADE G+ +IA
Sbjct: 61 KEQALRENQTIYFAFDNATIASDYEAMLAAHAAYLVKNPSLKVTIEGHADERGTPEYNIA 120
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
LG RRA AV Y A G+ + ++ + SYG+E P V G EDAYAKNRRA++
Sbjct: 121 LGERRAQAVAKYLEALGVQSGQVSIVSYGEEKPLVLGQSEDAYAKNRRAVLV 172
>gi|209550136|ref|YP_002282053.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209535892|gb|ACI55827.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 221
Score = 86.0 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++ FD +++P L+++ L K + + GH D
Sbjct: 93 GTGISVTRNGDNIILNMPSNITFDVDQDAVKPGFYPTLNSVAIVLRKFNRTLIDVNGHTD 152
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + L RRA +V +Y +GI R+ +G P E A+NRR
Sbjct: 153 STGSLQHNQDLSQRRALSVADYLGGQGIDQRRVSAVGFGPSQPVASNASEAGRAQNRRVE 212
Query: 151 VFL 153
+ +
Sbjct: 213 IQI 215
>gi|134296618|ref|YP_001120353.1| OmpA/MotB domain-containing protein [Burkholderia vietnamiensis G4]
gi|134139775|gb|ABO55518.1| OmpA/MotB domain protein [Burkholderia vietnamiensis G4]
Length = 213
Score = 86.0 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 1/139 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
I N ++ +V SV F T+ Y+I PA +L++L + +
Sbjct: 74 AIKNKLAPSAAKTGTQVTEQPDGSLKLNVPSSVTFATNQYAITPAFTPLLNDLATTLNQN 133
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
I G+ D GS + L RA +V N V RG++ R+ G P
Sbjct: 134 PQVTASIVGYTDSTGSAQLNQTLSQNRAQSVVNALVQRGVAGGRLSAQGMGASNPIADNA 193
Query: 139 DEDAYAKNRRAIVFLKGCR 157
E A+NRR ++L+ +
Sbjct: 194 TEAGRAQNRRVEIYLRAAQ 212
>gi|116620394|ref|YP_822550.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116223556|gb|ABJ82265.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076]
Length = 545
Score = 86.0 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 53/129 (41%), Gaps = 2/129 (1%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEG 87
+ + +L ++ D V FD + Y+++P + L+ + L + +EG
Sbjct: 404 NQLNMILETRETARGLIINISD-VLFDFNKYTLKPGAREKLAKVSGILLAYPGLNIKVEG 462
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
H D +GS + L RA +V +Y ++ + A + GK P +NR
Sbjct: 463 HTDSIGSDEYNQKLSESRASSVRDYLTSQNVPADSVSAVGLGKSDPVASNDTAAGRQRNR 522
Query: 148 RAIVFLKGC 156
R + + G
Sbjct: 523 RVELVVSGE 531
>gi|186476941|ref|YP_001858411.1| OmpA/MotB domain-containing protein [Burkholderia phymatum STM815]
gi|184193400|gb|ACC71365.1| OmpA/MotB domain protein [Burkholderia phymatum STM815]
Length = 217
Score = 86.0 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 54/130 (41%), Gaps = 1/130 (0%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF-LIE 86
+ ++ SV FDT+SY+I+P+ VLS + L ++ +
Sbjct: 83 ATKGTGTQITEQPDGSLKLNIPSSVTFDTNSYAIKPSFAPVLSQVAQTLNQNPEVVAQVV 142
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
GH D G + L + RA +V G++ R+ T G P + E A+N
Sbjct: 143 GHTDSTGQPAYNQTLSVNRAQSVAQQLATDGVAPQRLSATGMGANQPIADNNTETGRAQN 202
Query: 147 RRAIVFLKGC 156
RR ++L+
Sbjct: 203 RRVEIYLRAT 212
>gi|89054158|ref|YP_509609.1| OmpA/MotB [Jannaschia sp. CCS1]
gi|88863707|gb|ABD54584.1| OmpA/MotB [Jannaschia sp. CCS1]
Length = 219
Score = 86.0 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 1/118 (0%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRN 96
+ E ++ + + FD S +IR L L + D ++EGH D GS +
Sbjct: 100 ENTGEALILTLPEGILFDVDSAAIRAGLQGDLRALAFNLNQYPDTRVVVEGHTDNTGSAS 159
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ L RRA AV + G++ R++ G+ P + +NRR V ++
Sbjct: 160 YNQDLSTRRAQAVSGVLLEGGVAPFRVQSVGRGESAPIATNLTPEGRQQNRRVEVIIR 217
>gi|95929859|ref|ZP_01312600.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684]
gi|95134155|gb|EAT15813.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684]
Length = 246
Score = 86.0 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 4/128 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
D + + + DS+ F S +++PA VL+ + + IEGH D
Sbjct: 98 MDPSIKVVKDRGAVILQINDSILFAPGSSTLKPAAFPVLAKVAELIRPLPLSARIEGHTD 157
Query: 91 ELGS---RNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKN 146
++ S+ L + R+ +V YF + +RM YG E P V + AKN
Sbjct: 158 DIPFGRADMSNWDLSVARSVSVLKYFQKNDLLPLNRMSAVGYGAEKPLVPNDSPENRAKN 217
Query: 147 RRAIVFLK 154
RR L+
Sbjct: 218 RRVEFVLE 225
>gi|153833224|ref|ZP_01985891.1| outer membrane protein OmpA [Vibrio harveyi HY01]
gi|148870495|gb|EDL69410.1| outer membrane protein OmpA [Vibrio harveyi HY01]
Length = 326
Score = 86.0 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 1/101 (0%)
Query: 54 FDTSSYSIRPADIQVL-SNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F+ S + + + L + + E I G+ D G + L RRA AV +Y
Sbjct: 214 FEFDSAKLTDSVSERLDNFVNFLNEYPQAQVEITGYTDSSGPAAYNQKLSERRAQAVADY 273
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+A GI A R VT G+E P + +NRR V +
Sbjct: 274 LIAAGIDADRFTVTGMGEENPVADNSTHEGREQNRRVEVVV 314
>gi|167034765|ref|YP_001669996.1| OmpA/MotB domain-containing protein [Pseudomonas putida GB-1]
gi|166861253|gb|ABY99660.1| OmpA/MotB domain protein [Pseudomonas putida GB-1]
Length = 270
Score = 86.0 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 59/144 (40%), Gaps = 2/144 (1%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
++ + + S L ++GD V FDT S ++ + + + L +
Sbjct: 122 AKLASVQQQGKWVESQIAALASEQTDRGLVMTLGD-VLFDTGSADLKNSASRTVLKLVQF 180
Query: 76 LEKHDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
L+ + + IEG+ D G ++ L RA +V + V GI R++V YG + P
Sbjct: 181 LQLNPRRVVRIEGYTDSTGLAEDNLKLSRDRAQSVADMLVDLGIDEKRLQVEGYGDQYPI 240
Query: 135 VYGHDEDAYAKNRRAIVFLKGCRA 158
E A+NRR + +
Sbjct: 241 EANASERGRAQNRRVEIVFSDDKG 264
>gi|146308664|ref|YP_001189129.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp]
gi|145576865|gb|ABP86397.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp]
Length = 218
Score = 86.0 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 55/135 (40%), Gaps = 1/135 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
+ + T + + + ++ F ++S I + L++L ++ +
Sbjct: 82 TQEAKLRQTLQGTGVQVQRNGDDLKLIMPGNITFASNSADISSSFYPTLNSLVLVFKEFN 141
Query: 81 CD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ I GH D GS+ + +L RRA +V NY A G+ R+ G P
Sbjct: 142 KNGVNIVGHTDSTGSQELNQSLSSRRAQSVANYLTANGVPGQRISAYGAGPSQPIASNAT 201
Query: 140 EDAYAKNRRAIVFLK 154
+ A+NRR + L+
Sbjct: 202 DAGRAQNRRVEINLR 216
>gi|322421651|ref|YP_004200874.1| OmpA/MotB domain-containing protein [Geobacter sp. M18]
gi|320128038|gb|ADW15598.1| OmpA/MotB domain protein [Geobacter sp. M18]
Length = 254
Score = 86.0 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 57/130 (43%), Gaps = 5/130 (3%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGH 88
+ ++ S Q S+ ++ FFD+ S +++ + +L+++ + L + +EGH
Sbjct: 115 MGAQSKVSISVTQRGLVVSLKEAGFFDSGSATLKQSSFSLLNDVVTSLASYSNSVRVEGH 174
Query: 89 ADELG----SRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAY 143
D + S S+ L RA V Y + +R+ YG+ P DE+
Sbjct: 175 TDNIPISSASFPSNWELSTARATNVLQYLTKQEDFDPARISAAGYGEYRPVADNGDEEGR 234
Query: 144 AKNRRAIVFL 153
KNRR + L
Sbjct: 235 GKNRRVDIVL 244
>gi|77361745|ref|YP_341320.1| lipoprotein [Pseudoalteromonas haloplanktis TAC125]
gi|76876656|emb|CAI87878.1| putative lipoprotein [Pseudoalteromonas haloplanktis TAC125]
Length = 209
Score = 86.0 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHA 89
+ + + + ++ F T I LS + + K++ +EGH
Sbjct: 81 AGSGVEVVREGDNLRLVMPSNITFATDQSYISSGFHNTLSAIAKVMNKYEKTYLSVEGHT 140
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G + +++L +RA +V NY V + I A R+ T YG+ P + A+NRR
Sbjct: 141 DSTGKDSYNMSLSQQRAQSVKNYLVNQQIMAERISTTGYGETRPISSNDSANGRAQNRRV 200
Query: 150 IVFL 153
+ +
Sbjct: 201 EIQI 204
>gi|49081460|gb|AAT50132.1| PA0973 [synthetic construct]
Length = 169
Score = 86.0 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/139 (28%), Positives = 71/139 (51%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+ ++ + SL ++ + + +F+ S ++P ++ L
Sbjct: 29 ASGEGANGGVDPNAGYGANSGAVDGSLSDEAALRAITTFYFEYDSSDLKPEAMRALDVHA 88
Query: 74 SWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
L+ ++EGH DE G+R ++ALG RRA AV Y V +G+S +++++ SYGKE P
Sbjct: 89 KDLKGSGQRVVLEGHTDERGTREYNMALGERRAKAVQRYLVLQGVSPAQLELVSYGKERP 148
Query: 134 SVYGHDEDAYAKNRRAIVF 152
GHDE ++A+NRR +
Sbjct: 149 VATGHDEQSWAQNRRVELK 167
>gi|4580970|gb|AAD24557.1|AF117965_1 OprF [Pseudomonas marginalis pv. marginalis]
Length = 321
Score = 86.0 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 1/108 (0%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALG 102
V V FD ++P + NL ++ + + + GH D +G + L
Sbjct: 211 QVVRVELDVKFDFDKAVVKPNSYGDVKNLADFMAQYPATNVEVAGHTDSVGPDAYNQKLS 270
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
RRA AV V G++ SR+ YG+ P E A NRR
Sbjct: 271 QRRADAVKQVLVKDGVAPSRVTAVGYGESRPVADNATEAGRAVNRRVE 318
>gi|89092082|ref|ZP_01165037.1| hypothetical protein MED92_07941 [Oceanospirillum sp. MED92]
gi|89083817|gb|EAR63034.1| hypothetical protein MED92_07941 [Oceanospirillum sp. MED92]
Length = 218
Score = 86.0 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 1/127 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
T + + + + ++ F +S I P+ VL ++ ++ + ++G D
Sbjct: 91 GTGVRVERIGDSIRLIMPGNITFALNSDQIAPSFYSVLDSVAKVLVKFDQTELNVDGFTD 150
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + L RRA V +Y V+ GIS R+ YG+ P A+NRR
Sbjct: 151 STGSFEYNQQLSERRAARVGDYLVSSGISRLRINAKGYGERYPIADNKTAAGRAQNRRVE 210
Query: 151 VFLKGCR 157
+ + G R
Sbjct: 211 INISGTR 217
>gi|189347037|ref|YP_001943566.1| OmpA/MotB domain protein [Chlorobium limicola DSM 245]
gi|189341184|gb|ACD90587.1| OmpA/MotB domain protein [Chlorobium limicola DSM 245]
Length = 229
Score = 86.0 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 48/133 (36%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
D +I + E + F T S +I + L D
Sbjct: 80 DKQAAEIDRDVEGATVERMGEGIRVVFDSGILFSTGSATITATSRDNIERLARIINRYDD 139
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ +IEGH D +G+ S+ L RA AV N A G+ SR+ YG+ P E
Sbjct: 140 TNVVIEGHTDTVGNEESNQLLSEHRAEAVSNLLKAYGVYGSRLSPVGYGESRPVASNETE 199
Query: 141 DAYAKNRRAIVFL 153
NRR + +
Sbjct: 200 SGRRLNRRVEILI 212
>gi|22126930|ref|NP_670353.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
pestis KIM 10]
gi|45440865|ref|NP_992404.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
pestis biovar Microtus str. 91001]
gi|108806600|ref|YP_650516.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
pestis Antiqua]
gi|108813033|ref|YP_648800.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
pestis Nepal516]
gi|145599836|ref|YP_001163912.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
pestis Pestoides F]
gi|149366875|ref|ZP_01888909.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis
CA88-4125]
gi|162418864|ref|YP_001605923.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
pestis Angola]
gi|165924580|ref|ZP_02220412.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165938361|ref|ZP_02226919.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar
Orientalis str. IP275]
gi|166011606|ref|ZP_02232504.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166211496|ref|ZP_02237531.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar
Antiqua str. B42003004]
gi|167400048|ref|ZP_02305566.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167419890|ref|ZP_02311643.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167424166|ref|ZP_02315919.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|218928293|ref|YP_002346168.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
pestis CO92]
gi|229841062|ref|ZP_04461221.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
pestis biovar Orientalis str. PEXU2]
gi|229843166|ref|ZP_04463312.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
pestis biovar Orientalis str. India 195]
gi|229894003|ref|ZP_04509189.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
pestis Pestoides A]
gi|229903473|ref|ZP_04518586.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
pestis Nepal516]
gi|270487253|ref|ZP_06204327.1| peptidoglycan-associated lipoprotein [Yersinia pestis KIM D27]
gi|294503130|ref|YP_003567192.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis Z176003]
gi|21959969|gb|AAM86604.1|AE013906_8 peptidoglycan-associated lipoprotein [Yersinia pestis KIM 10]
gi|45435723|gb|AAS61281.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis biovar
Microtus str. 91001]
gi|108776681|gb|ABG19200.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis Nepal516]
gi|108778513|gb|ABG12571.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis Antiqua]
gi|115346904|emb|CAL19791.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis CO92]
gi|145211532|gb|ABP40939.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis Pestoides
F]
gi|149291249|gb|EDM41324.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis
CA88-4125]
gi|162351679|gb|ABX85627.1| peptidoglycan-associated lipoprotein [Yersinia pestis Angola]
gi|165913739|gb|EDR32358.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar
Orientalis str. IP275]
gi|165923640|gb|EDR40772.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar
Orientalis str. F1991016]
gi|165989554|gb|EDR41855.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar
Antiqua str. E1979001]
gi|166207267|gb|EDR51747.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar
Antiqua str. B42003004]
gi|166962631|gb|EDR58652.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar
Orientalis str. MG05-1020]
gi|167050756|gb|EDR62164.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar
Antiqua str. UG05-0454]
gi|167057015|gb|EDR66778.1| peptidoglycan-associated lipoprotein [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|229679243|gb|EEO75346.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
pestis Nepal516]
gi|229689513|gb|EEO81574.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
pestis biovar Orientalis str. India 195]
gi|229697428|gb|EEO87475.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
pestis biovar Orientalis str. PEXU2]
gi|229703888|gb|EEO90901.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
pestis Pestoides A]
gi|262361166|gb|ACY57887.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis D106004]
gi|262365277|gb|ACY61834.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis D182038]
gi|270335757|gb|EFA46534.1| peptidoglycan-associated lipoprotein [Yersinia pestis KIM D27]
gi|294353589|gb|ADE63930.1| peptidoglycan-associated lipoprotein Pal [Yersinia pestis Z176003]
gi|320014265|gb|ADV97836.1| peptidoglycan-associated outer membrane lipoprotein [Yersinia
pestis biovar Medievalis str. Harbin 35]
Length = 168
Score = 86.0 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 15/167 (8%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDT----------VLNESSLQEQFSS 46
MQ + + + L + + + S + + S E + +
Sbjct: 1 MQLNKVLKGLMLALPVLAVAACSSNKSANNDQSGMGAGTGTENGSNLSSEEQARLQMQEL 60
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRR 105
+ V+F Y I Q+L ++L + ++EGHADE G+ +IALG RR
Sbjct: 61 QKNNIVYFGFDKYDIGSDFAQMLDAHAAFLRSNPSDKVVVEGHADERGTPEYNIALGERR 120
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
A AV Y +G+SA ++ + SYGKE P+V GHDE A+AKNRRA++
Sbjct: 121 ASAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAFAKNRRAVLV 167
>gi|257470361|ref|ZP_05634452.1| Outer membrane porin F [Fusobacterium ulcerans ATCC 49185]
gi|317064570|ref|ZP_07929055.1| outer membrane porin F [Fusobacterium ulcerans ATCC 49185]
gi|313690246|gb|EFS27081.1| outer membrane porin F [Fusobacterium ulcerans ATCC 49185]
Length = 186
Score = 86.0 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALG 102
S+ + V FD + Y ++ L+ L E D I+G+ D +GS ++ L
Sbjct: 71 LVLSMPELVLFDFNKYEVKNKIKGSLNALAKALEENPDIRIKIDGYTDFIGSEGYNLELS 130
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
++RA A+ +Y +G+ AS + + YGK+ P E AKNRR + +
Sbjct: 131 VKRADAIKDYLTNKGVKASNISIEGYGKQNPIASNQTETGRAKNRRVEFIISRDK 185
>gi|169123287|gb|ACA47115.1| OmpF [Pseudomonas putida]
Length = 343
Score = 86.0 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 57/138 (41%), Gaps = 4/138 (2%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD ++P + NL ++++
Sbjct: 202 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQ 261
Query: 79 HDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVY 136
+ +EGH D +G + L RRA AV + + +SR++ YG+ P
Sbjct: 262 YPSTSTTVEGHTDSVGPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSVGYGESRPVAD 321
Query: 137 GHDEDAYAKNRRAIVFLK 154
E A NRR ++
Sbjct: 322 NKTEAGRAVNRRVEAQVE 339
>gi|124267424|ref|YP_001021428.1| putative signal peptide protein [Methylibium petroleiphilum PM1]
gi|124260199|gb|ABM95193.1| putative signal peptide protein [Methylibium petroleiphilum PM1]
Length = 219
Score = 86.0 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FFD +++P L +L S + + + +I GH D +GS + L LR
Sbjct: 104 VTYAADAFFDFDKATLKPEAKSKLDDLASKIAGLNLEVVIAVGHTDSVGSDAYNQKLSLR 163
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
R+ AV Y ++GI +R+ G++ P D AKNRR + + G R
Sbjct: 164 RSEAVKAYLESKGIEKNRIYTEGKGEKQPVADNKTADGRAKNRRTEIEVVGTR 216
>gi|71275795|ref|ZP_00652079.1| OmpA/MotB [Xylella fastidiosa Dixon]
gi|71900394|ref|ZP_00682527.1| OmpA/MotB [Xylella fastidiosa Ann-1]
gi|170730225|ref|YP_001775658.1| outer membrane protein P6 [Xylella fastidiosa M12]
gi|71163373|gb|EAO13091.1| OmpA/MotB [Xylella fastidiosa Dixon]
gi|71729826|gb|EAO31924.1| OmpA/MotB [Xylella fastidiosa Ann-1]
gi|167965018|gb|ACA12028.1| outer membrane protein P6 precursor [Xylella fastidiosa M12]
Length = 178
Score = 86.0 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 69/174 (39%), Gaps = 22/174 (12%)
Query: 1 MQYSTIFIILSAITMMSISGIDNL---------------------DTKISSPDTVLNESS 39
M T F+++S ++ ++ T + + + ++
Sbjct: 1 MNNYTRFLLISLLSTSALVACSKKVKEQPHVPVKPMAPTVSTPTPTTTAPTDSSGIYTAA 60
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSS 98
+ + V+FD ++ VLS + + ++G+ DE GSR +
Sbjct: 61 DLDTDACLRQRVVYFDFDKDDVKKEFQTVLSCHAKYLRNRPSAHITLQGNTDERGSREYN 120
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
IALG RR +V A G S+ ++ V SYG+E P E +++NRR +
Sbjct: 121 IALGERRGNSVLYSLQANGASSGQLNVVSYGEERPVCTESTESCWSRNRRVEIV 174
>gi|320352974|ref|YP_004194313.1| OmpA/MotB domain-containing protein [Desulfobulbus propionicus DSM
2032]
gi|320121476|gb|ADW17022.1| OmpA/MotB domain protein [Desulfobulbus propionicus DSM 2032]
Length = 359
Score = 86.0 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/110 (29%), Positives = 46/110 (41%), Gaps = 2/110 (1%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
+++ FD IRP L LG + ++ G D LGS +I L RRA +
Sbjct: 250 NNILFDFDKAFIRPEHHAQLDQLGRLLVANPHVYVVLSGFCDSLGSEAYNIRLSQRRAES 309
Query: 109 VFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
V Y + I R+ + YG P E+ NRR + L+G R
Sbjct: 310 VRRYLQKKFTIKKDRILLYWYGYANPVASNATEEGRQLNRRVTIVLRGTR 359
>gi|238752234|ref|ZP_04613714.1| Outer membrane protein and peptidoglycan-associated (lipo)protein
[Yersinia rohdei ATCC 43380]
gi|238709502|gb|EEQ01740.1| Outer membrane protein and peptidoglycan-associated (lipo)protein
[Yersinia rohdei ATCC 43380]
Length = 153
Score = 86.0 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 58/149 (38%), Gaps = 5/149 (3%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESS----LQEQFSSSVGDSVFFDTSSYSIRPAD 65
A+ +++++G + +++ + + + + V FDT +
Sbjct: 3 FIALCLLALAGCQAKPSGLTAEQIAALQEQGFKLTDNGWEFGLANKVLFDTDIRELNSTG 62
Query: 66 IQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
Q + ++G ++GH D G + L +RA AV + A GI +R+
Sbjct: 63 KQTVESIGRALHNVGINHLRVDGHTDSTGEDGYNQQLSYQRAAAVADSLSASGIPRARID 122
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V G+ P+ A+NRR + +
Sbjct: 123 VRGRGELEPAADNKTAQGRAENRRVAIIV 151
>gi|290474098|ref|YP_003466974.1| outer membrane integrity protein [Xenorhabdus bovienii SS-2004]
gi|289173407|emb|CBJ80184.1| required for outer membrane integrity, uptake of group A colicins,
and translocation of phage DNA [Xenorhabdus bovienii
SS-2004]
Length = 167
Score = 86.0 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 56/166 (33%), Positives = 82/166 (49%), Gaps = 14/166 (8%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDTVLNES---------SLQEQFSSS 47
MQ + + + L + + + S N + S TV N + + Q+
Sbjct: 1 MQLNKVLKGLMLALPIMAVAACSTNKNGNNDQSGVGTVDNSAKAGLSAEELARQQMQELQ 60
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRA 106
+ V+F Y I Q+L +L + IEGHADE G+ +IALG RRA
Sbjct: 61 NNNIVYFGFDKYDINSDFAQMLDAHAVFLRSNPSIKVTIEGHADERGTPEYNIALGERRA 120
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
AV Y +G+SA ++ + SYGKE P+V GHDE AY+KNRRA++
Sbjct: 121 NAVKMYLQGKGVSADQLAIVSYGKEKPAVLGHDEAAYSKNRRAVIV 166
>gi|240851216|ref|YP_002972619.1| peptidoglycan-associated lipoprotein [Bartonella grahamii as4aup]
gi|240268339|gb|ACS51927.1| peptidoglycan-associated lipoprotein [Bartonella grahamii as4aup]
Length = 173
Score = 86.0 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 51/163 (31%), Positives = 82/163 (50%), Gaps = 8/163 (4%)
Query: 5 TIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQE-------QFSSSVGDSVFFDTS 57
++ ++ ++ G N+ +N++ L + +F+ +VGD VFF
Sbjct: 11 SLAVLFFFALCLAGCGKKNVGALNGMNGAYMNDAGLNQVPPGSGQEFTVNVGDRVFFSLD 70
Query: 58 SYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
S S+ ++L+ WL +IEGHADE G+R ++ALG RRA AV NY V+
Sbjct: 71 SSSLDADAERILTRQAEWLLHYPYYSIMIEGHADERGTREYNLALGQRRAVAVRNYLVSL 130
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
G+S R++ SYGKE P D + +NRRA+ L ++
Sbjct: 131 GVSEQRIQTISYGKERPVAVCDDISCWNQNRRAVTTLSDMNSH 173
>gi|83719210|ref|YP_441918.1| OmpA family outer membrane protein [Burkholderia thailandensis
E264]
gi|167580762|ref|ZP_02373636.1| outer membrane protein, OmpA family [Burkholderia thailandensis
TXDOH]
gi|167618865|ref|ZP_02387496.1| outer membrane protein, OmpA family [Burkholderia thailandensis
Bt4]
gi|257138089|ref|ZP_05586351.1| OmpA family outer membrane protein [Burkholderia thailandensis
E264]
gi|83653035|gb|ABC37098.1| outer membrane protein, OmpA family [Burkholderia thailandensis
E264]
Length = 170
Score = 86.0 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 15/167 (8%)
Query: 1 MQYSTIFIILSAITMMSISGIDN-------------LDTKISSPDTV-LNESSLQEQFSS 46
M + + + + + +++ + + T+ + + + L + S
Sbjct: 1 MMSKKLRLAFAMLMIGALAACKSGVKLDEHANQGGAVSTQPNPENVAQVTVDPLNDPNSP 60
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRR 105
SV+FD SYS++ +L +L+ H LI+G+ DE G+ ++ALG +R
Sbjct: 61 LAKRSVYFDFDSYSVQDQYQPLLQQHAQYLKSHPQRHILIQGNTDERGTSEYNLALGQKR 120
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
A AV G+ S+M+ S GKE P GHDE ++A+NRRA +
Sbjct: 121 AEAVRRALSLLGVGDSQMEAVSLGKEKPVALGHDEASWAQNRRADLV 167
>gi|86131069|ref|ZP_01049668.1| OmpA family protein [Dokdonia donghaensis MED134]
gi|85818480|gb|EAQ39640.1| OmpA family protein [Dokdonia donghaensis MED134]
Length = 470
Score = 86.0 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/138 (26%), Positives = 55/138 (39%), Gaps = 6/138 (4%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSS-----VGDSVFFDTSSYSIRPADIQVLSNLGS-W 75
D D TV N + V FD + SIR L + S
Sbjct: 330 DKDDECPDVAGTVANNGCPEVSVEVLNDLNVETKKVLFDYNKASIRTESYATLDKVASVM 389
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+E FLIEGH D+ G ++ L +RA +V +Y +GI ASR++ +G+ P
Sbjct: 390 MEYPTTRFLIEGHTDDRGRDAYNLDLSDQRAASVRSYLTGKGIPASRLESKGFGEARPVA 449
Query: 136 YGHDEDAYAKNRRAIVFL 153
+NRR + +
Sbjct: 450 SNKTAAGRQENRRVELSI 467
>gi|260574860|ref|ZP_05842862.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
gi|259022865|gb|EEW26159.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
Length = 218
Score = 86.0 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 48/126 (38%), Gaps = 1/126 (0%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEG 87
S ++ ++ + F S ++RP L + + L + D + G
Sbjct: 88 SQMSNSTMVTNTGNSLVVTMPQDILFALDSANLRPDLQADLRAVSNNLLDYPDSTIEVVG 147
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
H D+ GS + L RRA AV G+ R+ G++ P + A+NR
Sbjct: 148 HTDDSGSAAYNQDLSERRARAVAAVLRNGGVPGGRISAYGRGEDQPIASNQTVNGRAQNR 207
Query: 148 RAIVFL 153
R + +
Sbjct: 208 RVEIII 213
>gi|27366989|ref|NP_762516.1| outer membrane protein A [Vibrio vulnificus CMCP6]
gi|37676767|ref|NP_937163.1| outer membrane protein [Vibrio vulnificus YJ016]
gi|27358557|gb|AAO07506.1| Outer membrane protein A precursor [Vibrio vulnificus CMCP6]
gi|37201310|dbj|BAC97133.1| outer membrane protein [Vibrio vulnificus YJ016]
Length = 357
Score = 86.0 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIAL 101
+FS+ + F T S + Q L+ L ++ D + I GH D GS + +
Sbjct: 233 KFSNQQYNQELFATGSSKLSAGGKQALTPLAEVLIKYPDAEAEIVGHTDSTGSEKVNQRI 292
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+RA AV +Y V +G+ A ++KV G+ P + A+NRR V +
Sbjct: 293 SEQRAQAVADYLVEQGVKAEQLKVRGAGESQPIASNKTAEGRAQNRRVEVTI 344
>gi|15596170|ref|NP_249664.1| Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas
aeruginosa PAO1]
gi|107100429|ref|ZP_01364347.1| hypothetical protein PaerPA_01001454 [Pseudomonas aeruginosa PACS2]
gi|116048898|ref|YP_792301.1| peptidoglycan associated lipoprotein OprL precursor [Pseudomonas
aeruginosa UCBPP-PA14]
gi|218893056|ref|YP_002441925.1| Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas
aeruginosa LESB58]
gi|254239321|ref|ZP_04932644.1| Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas
aeruginosa C3719]
gi|254245256|ref|ZP_04938578.1| Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas
aeruginosa 2192]
gi|296390668|ref|ZP_06880143.1| peptidoglycan-associated lipoprotein [Pseudomonas aeruginosa PAb1]
gi|81622520|sp|Q9I4Z4|PAL_PSEAE RecName: Full=Peptidoglycan-associated lipoprotein; Flags:
Precursor
gi|9946880|gb|AAG04362.1|AE004530_15 Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas
aeruginosa PAO1]
gi|115584119|gb|ABJ10134.1| Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas
aeruginosa UCBPP-PA14]
gi|126171252|gb|EAZ56763.1| Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas
aeruginosa C3719]
gi|126198634|gb|EAZ62697.1| Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas
aeruginosa 2192]
gi|218773284|emb|CAW29096.1| Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas
aeruginosa LESB58]
Length = 168
Score = 86.0 bits (211), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/139 (28%), Positives = 71/139 (51%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+ ++ + SL ++ + + +F+ S ++P ++ L
Sbjct: 29 ASGEGANGGVDPNAGYGANSGAVDGSLSDEAALRAITTFYFEYDSSDLKPEAMRALDVHA 88
Query: 74 SWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
L+ ++EGH DE G+R ++ALG RRA AV Y V +G+S +++++ SYGKE P
Sbjct: 89 KDLKGSGQRVVLEGHTDERGTREYNMALGERRAKAVQRYLVLQGVSPAQLELVSYGKERP 148
Query: 134 SVYGHDEDAYAKNRRAIVF 152
GHDE ++A+NRR +
Sbjct: 149 VATGHDEQSWAQNRRVELK 167
>gi|189475074|gb|ACE00211.1| OmpA [Vibrio alginolyticus]
Length = 330
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 1/101 (0%)
Query: 54 FDTSSYSIRPADIQVL-SNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F+ S + + + L + + E I G+ D G + L RRA +V +Y
Sbjct: 218 FEFDSAKLTESVSERLDNFVSFLNEYPQAQVEITGYTDSSGPAAYNQKLSERRAQSVADY 277
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
A GI + R+ V G+E P + KNRR V +
Sbjct: 278 LTAAGIGSDRLTVKGMGEENPVADNSTREGREKNRRVEVVV 318
>gi|167563920|ref|ZP_02356836.1| outer membrane protein, OmpA family [Burkholderia oklahomensis
EO147]
gi|167571055|ref|ZP_02363929.1| outer membrane protein, OmpA family [Burkholderia oklahomensis
C6786]
Length = 170
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 15/167 (8%)
Query: 1 MQYSTIFIILSAITMMSISGIDN-------------LDTKISSPDTV-LNESSLQEQFSS 46
M + + + + + +++ + + T+ + + + L + S
Sbjct: 1 MMSKKLRLAFAVLMIGALAACKSGVKLDEHANQGGAVSTQPNPENVAQVTVDPLNDPNSP 60
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRR 105
SV+FD SYS++ +L +L+ H LI+G+ DE G+ ++ALG +R
Sbjct: 61 LAKRSVYFDFDSYSVQDQYQALLQQHAQYLKGHPQRHILIQGNTDERGTSEYNLALGQKR 120
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
A AV G++ S+M+ S GKE P GHDE ++A+NRRA +
Sbjct: 121 AEAVRRALSLLGVTDSQMEAVSLGKEKPVALGHDEASWAQNRRADLV 167
>gi|145628739|ref|ZP_01784539.1| scaffold protein [Haemophilus influenzae 22.1-21]
gi|144979209|gb|EDJ88895.1| scaffold protein [Haemophilus influenzae 22.1-21]
Length = 153
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 3/151 (1%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSI 61
++ ++ ++ ++ N D + S+ + ++V+F Y I
Sbjct: 3 KFVKSLLVAGSVAALAACSSSNNDAAGNGAAQTFGGYSVAD--LQQRYNTVYFGFDKYDI 60
Query: 62 RPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA 120
+Q+L ++L L+EG+ DE G+ +IALG RRA AV Y +G+ A
Sbjct: 61 TGEYVQILDAHAAYLNATPATKVLVEGNTDERGTPEYNIALGQRRADAVKGYLAGKGVDA 120
Query: 121 SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
++ SYG+E P+V GHDE AY+KNRRA++
Sbjct: 121 GKLGTVSYGEEKPAVLGHDEAAYSKNRRAVL 151
>gi|16272329|ref|NP_438542.1| peptidoglycan-associated outer membrane lipoprotein [Haemophilus
influenzae Rd KW20]
gi|68248984|ref|YP_248096.1| outer membrane protein P6 [Haemophilus influenzae 86-028NP]
gi|145630448|ref|ZP_01786229.1| outer membrane protein P6 precursor [Haemophilus influenzae R3021]
gi|145632628|ref|ZP_01788362.1| scaffold protein [Haemophilus influenzae 3655]
gi|145634623|ref|ZP_01790332.1| outer membrane protein P6 precursor [Haemophilus influenzae PittAA]
gi|145638710|ref|ZP_01794319.1| outer membrane protein P6 precursor [Haemophilus influenzae PittII]
gi|148825337|ref|YP_001290090.1| outer membrane protein P6 [Haemophilus influenzae PittEE]
gi|229844456|ref|ZP_04464596.1| outer membrane protein P6 precursor [Haemophilus influenzae 6P18H1]
gi|229846468|ref|ZP_04466576.1| outer membrane protein P6 precursor [Haemophilus influenzae 7P49H1]
gi|260580556|ref|ZP_05848384.1| peptidoglycan-associated lipoprotein [Haemophilus influenzae RdAW]
gi|260582355|ref|ZP_05850148.1| peptidoglycan-associated lipoprotein [Haemophilus influenzae NT127]
gi|319775690|ref|YP_004138178.1| peptidoglycan-associated outer membrane lipoprotein [Haemophilus
influenzae F3047]
gi|319898097|ref|YP_004136294.1| peptidoglycan-associated outer membrane lipoprotein [Haemophilus
influenzae F3031]
gi|329122256|ref|ZP_08250844.1| peptidoglycan-associated lipoprotein [Haemophilus aegyptius ATCC
11116]
gi|129596|sp|P10324|PAL_HAEIN RecName: Full=Outer membrane protein P6; Short=OMP P6; AltName:
Full=15 kDa peptidoglycan-associated lipoprotein;
Short=PC protein; Flags: Precursor
gi|148860|gb|AAA24940.1| PC protein precursor [Haemophilus influenzae]
gi|148961|gb|AAA24994.1| outer membrane protein P6 precursor [Haemophilus influenzae]
gi|1573351|gb|AAC22039.1| peptidoglycan-associated outer membrane lipoprotein (pal)
[Haemophilus influenzae Rd KW20]
gi|68057183|gb|AAX87436.1| outer membrane protein P6 precursor [Haemophilus influenzae
86-028NP]
gi|144984183|gb|EDJ91620.1| outer membrane protein P6 precursor [Haemophilus influenzae R3021]
gi|144986823|gb|EDJ93375.1| scaffold protein [Haemophilus influenzae 3655]
gi|145268168|gb|EDK08163.1| outer membrane protein P6 precursor [Haemophilus influenzae PittAA]
gi|145272305|gb|EDK12213.1| outer membrane protein P6 precursor [Haemophilus influenzae PittII]
gi|148715497|gb|ABQ97707.1| outer membrane protein P6 precursor [Haemophilus influenzae PittEE]
gi|229810561|gb|EEP46279.1| outer membrane protein P6 precursor [Haemophilus influenzae 7P49H1]
gi|229812705|gb|EEP48394.1| outer membrane protein P6 precursor [Haemophilus influenzae 6P18H1]
gi|260092898|gb|EEW76833.1| peptidoglycan-associated lipoprotein [Haemophilus influenzae RdAW]
gi|260094723|gb|EEW78618.1| peptidoglycan-associated lipoprotein [Haemophilus influenzae NT127]
gi|301169083|emb|CBW28680.1| peptidoglycan-associated outer membrane lipoprotein [Haemophilus
influenzae 10810]
gi|309750200|gb|ADO80184.1| Peptidoglycan-associated outer membrane lipoprotein [Haemophilus
influenzae R2866]
gi|309972460|gb|ADO95661.1| Peptidoglycan-associated outer membrane lipoprotein [Haemophilus
influenzae R2846]
gi|317433603|emb|CBY81987.1| peptidoglycan-associated outer membrane lipoprotein [Haemophilus
influenzae F3031]
gi|317450281|emb|CBY86497.1| peptidoglycan-associated outer membrane lipoprotein [Haemophilus
influenzae F3047]
gi|327473817|gb|EGF19234.1| peptidoglycan-associated lipoprotein [Haemophilus aegyptius ATCC
11116]
Length = 153
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 3/151 (1%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSI 61
++ ++ ++ ++ N D + S+ + ++V+F Y I
Sbjct: 3 KFVKSLLVAGSVAALAACSSSNNDAAGNGAAQTFGGYSVAD--LQQRYNTVYFGFDKYDI 60
Query: 62 RPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA 120
+Q+L + L+EG+ DE G+ +IALG RRA AV Y +G+ A
Sbjct: 61 TGEYVQILDAHAAYLNATPAAKVLVEGNTDERGTPEYNIALGQRRADAVKGYLAGKGVDA 120
Query: 121 SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
++ SYG+E P+V GHDE AY+KNRRA++
Sbjct: 121 GKLGTVSYGEEKPAVLGHDEAAYSKNRRAVL 151
>gi|310823400|ref|YP_003955758.1| OmpA domain-containing protein [Stigmatella aurantiaca DW4/3-1]
gi|309396472|gb|ADO73931.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 611
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNS 97
L E + ++ F+T I+ ++L + S L ++ LIEGH D +GSRN
Sbjct: 460 LVESDRIRIKGNILFETGQAKIQKQSFKLLDEVASVLRRNPTLGPVLIEGHTDNVGSRNY 519
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L RRA AV +Y +GI R+ +G + P AKNRR L
Sbjct: 520 NVDLSQRRAKAVLDYLAGKGIDRKRLSSKGFGFDQPIATNDTPLGRAKNRRVEFRL 575
>gi|115372712|ref|ZP_01460018.1| hypothetical protein STIAU_6203 [Stigmatella aurantiaca DW4/3-1]
gi|115370193|gb|EAU69122.1| hypothetical protein STIAU_6203 [Stigmatella aurantiaca DW4/3-1]
Length = 334
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNS 97
L E + ++ F+T I+ ++L + S L ++ LIEGH D +GSRN
Sbjct: 183 LVESDRIRIKGNILFETGQAKIQKQSFKLLDEVASVLRRNPTLGPVLIEGHTDNVGSRNY 242
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L RRA AV +Y +GI R+ +G + P AKNRR L
Sbjct: 243 NVDLSQRRAKAVLDYLAGKGIDRKRLSSKGFGFDQPIATNDTPLGRAKNRRVEFRL 298
>gi|304312902|ref|YP_003812500.1| Bacterial outer membrane protein, OmpA [gamma proteobacterium HdN1]
gi|301798635|emb|CBL46867.1| Bacterial outer membrane protein, OmpA [gamma proteobacterium HdN1]
Length = 169
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 8/155 (5%)
Query: 6 IFIILSAITMMSISGIDNLDTKISS------PDTVLNESSLQEQFSSSVGDSV-FFDTSS 58
+F +++A+ + S T + V + + SS + V +FD
Sbjct: 9 LFGLIAAVAIAGCSSSAEDTTAVDEGAGTAVVAPVTSTTDTGASTSSILSQRVVYFDFDK 68
Query: 59 YSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG 117
++R ++L +L H IEGHADE G+R ++ALG RRA AV ++ A G
Sbjct: 69 SAVRADAYEILQAHAQYLSSHAGARIRIEGHADERGTREYNMALGERRAKAVQSFLNANG 128
Query: 118 ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
A +++V SYG+E P GHDE ++A+NRR+ +
Sbjct: 129 AGAGQLEVVSYGEENPIALGHDEASWAQNRRSELV 163
>gi|258544708|ref|ZP_05704942.1| outer membrane protein A [Cardiobacterium hominis ATCC 15826]
gi|258520045|gb|EEV88904.1| outer membrane protein A [Cardiobacterium hominis ATCC 15826]
Length = 201
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 56/135 (41%), Gaps = 4/135 (2%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-- 81
D + +P+ +Q + ++G +FD +++PA Q L +L L +
Sbjct: 54 RDCGVQAPEPAPPVMEMQRE-VITLGTDTYFDFDKSNLKPAGKQALQDLAGQLNQRGANI 112
Query: 82 -DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ GH D G+ + L RRA V NY G+ + ++ G+ P
Sbjct: 113 QKITVVGHTDSKGTDAYNQKLSERRASTVANYLAENGVPSQLIEAYGQGESHPVATNKTA 172
Query: 141 DAYAKNRRAIVFLKG 155
+ A+NRR V + G
Sbjct: 173 EGRAQNRRVEVNVDG 187
>gi|91224878|ref|ZP_01260138.1| outer membrane protein OmpA [Vibrio alginolyticus 12G01]
gi|91190424|gb|EAS76693.1| outer membrane protein OmpA [Vibrio alginolyticus 12G01]
Length = 330
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 1/101 (0%)
Query: 54 FDTSSYSIRPADIQVL-SNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F+ S + + + L + + E I G+ D G + L RRA +V +Y
Sbjct: 218 FEFDSAKLTESVSERLDNFVSFLNEYPQAQVEITGYTDSSGPAAYNQKLSERRAQSVADY 277
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
A GI + R+ V G+E P + KNRR V +
Sbjct: 278 LTAAGIGSDRLTVKGMGEENPVADNSTREGREKNRRVEVVV 318
>gi|307944546|ref|ZP_07659886.1| outer membrane lipoprotein Omp16 [Roseibium sp. TrichSKD4]
gi|307772295|gb|EFO31516.1| outer membrane lipoprotein Omp16 [Roseibium sp. TrichSKD4]
Length = 163
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 4/150 (2%)
Query: 5 TIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPA 64
+F ++ + ++ D + + F +VGD ++F ++
Sbjct: 12 KLFATVAILMFLAACAQTKPD---LAGGAGNVAPGSGQDFVVNVGDRIYFAEDQSTLSSQ 68
Query: 65 DIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
L W +EGHADE G+R ++ALG RRA + +Y V+RGIS +R+
Sbjct: 69 ARATLDKQVQWLNRYSQYTVTVEGHADERGTRQYNLALGARRANSARDYLVSRGISTTRI 128
Query: 124 KVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
K SYGKE P +++ + +NRRA+ L
Sbjct: 129 KTISYGKERPVAVCNNDSCWTQNRRAVTVL 158
>gi|94496180|ref|ZP_01302758.1| OmpA/MotB [Sphingomonas sp. SKA58]
gi|94424359|gb|EAT09382.1| OmpA/MotB [Sphingomonas sp. SKA58]
Length = 172
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 53/136 (38%), Positives = 69/136 (50%), Gaps = 3/136 (2%)
Query: 20 GIDNLDTKISSPD-TVLNESSLQEQFSSSVG-DSVFFDTSSYSIRPADIQVLSNLGSW-L 76
G D T + P QE F +SV D +FF Y + D L + +W
Sbjct: 33 GTDAGSTMPTGPATPAGPRKGSQEDFVASVASDRIFFGLDQYDVDAEDQATLQSQAAWLQ 92
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ IEGHADE G+R+ +IALG RRA A NY + GI R+ SYGKE P+
Sbjct: 93 QNPSVRVTIEGHADERGTRDYNIALGERRANAAKNYLASLGIDPGRITTVSYGKERPAAL 152
Query: 137 GHDEDAYAKNRRAIVF 152
G DE A+A+NRRA+
Sbjct: 153 GSDEAAWAQNRRAVTV 168
>gi|116253010|ref|YP_768848.1| OmpA family outer membrane protein [Rhizobium leguminosarum bv.
viciae 3841]
gi|115257658|emb|CAK08755.1| putative OmpA family outer membrane protein [Rhizobium
leguminosarum bv. viciae 3841]
Length = 221
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++ FD +++P L+++ L K + + GH D
Sbjct: 93 GTGISVTRNGDNIILNMPSNITFDVDQDAVKPGFYPTLNSVAIVLRKFNRTLIDVNGHTD 152
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + L RRA +V +Y +GI R+ +G P E A+NRR
Sbjct: 153 STGSLQHNQDLSQRRALSVADYLGGQGIDQRRVSAVGFGPSQPVASNASEAGRAQNRRVE 212
Query: 151 VFL 153
+ +
Sbjct: 213 IQI 215
>gi|332291754|ref|YP_004430363.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332169840|gb|AEE19095.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 471
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/138 (26%), Positives = 55/138 (39%), Gaps = 6/138 (4%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSS-----VGDSVFFDTSSYSIRPADIQVLSNLGS-W 75
D D TV N + V FD + SIR L + S
Sbjct: 331 DKDDECPDVAGTVANNGCPEVSVEVLNELNLETKKVLFDYNKASIRTESYATLDKVASVM 390
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+E FLIEGH D+ G ++ L +RA +V +Y +GI A+R++ +G+ P
Sbjct: 391 MEYPTTRFLIEGHTDDRGRDAYNLDLSDQRAASVRSYLTGKGIPAARLESKGFGEARPVA 450
Query: 136 YGHDEDAYAKNRRAIVFL 153
+NRR + +
Sbjct: 451 SNKTAAGRQENRRVELSI 468
>gi|298372474|ref|ZP_06982464.1| OmpA family outer membrane protein [Bacteroidetes oral taxon 274
str. F0058]
gi|298275378|gb|EFI16929.1| OmpA family outer membrane protein [Bacteroidetes oral taxon 274
str. F0058]
Length = 633
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
+++FF +SY + P + + L S+ + D I GH D +G N + L RA A
Sbjct: 528 NNIFFAFNSYELEPKSEREIMQLYSFLRKNPDVSIEIVGHTDNIGGENFNQTLSENRALA 587
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
V + +GI A R+ G P + E+ KNRR +K
Sbjct: 588 VMMALIEKGIDAGRLYYRGMGLSQPIASNNTEEGREKNRRVEFVIK 633
>gi|94496613|ref|ZP_01303189.1| OmpA/MotB [Sphingomonas sp. SKA58]
gi|94423973|gb|EAT08998.1| OmpA/MotB [Sphingomonas sp. SKA58]
Length = 226
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 1/125 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGH 88
+ T ++ + + + F ++P L+++ S L ++ + GH
Sbjct: 92 TAGTGVDVIRDGDNLLLRMPSGITFGYDRADVQPQFQPTLNDVASVLAQYPKTYIDVYGH 151
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D GS + L RRA AV NY V RG+ ++R+ +G+ P E+ A NRR
Sbjct: 152 TDSDGSDAYNQTLSERRAQAVANYLVGRGVQSARIGTRGFGETQPIASNATEEGKAANRR 211
Query: 149 AIVFL 153
+ +
Sbjct: 212 VEIKI 216
>gi|149925042|ref|ZP_01913359.1| outer membrane protein, OmpA/MotB family [Plesiocystis pacifica
SIR-1]
gi|149814084|gb|EDM73711.1| outer membrane protein, OmpA/MotB family [Plesiocystis pacifica
SIR-1]
Length = 233
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 56/151 (37%), Gaps = 2/151 (1%)
Query: 5 TIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPA 64
TIF A+T++ P+ + + + + + F+ IR
Sbjct: 25 TIFADADALTVVGEPPPPPPPPPEPEPEPEPPKRVEVTASAIVINEKILFEVDKAEIRSE 84
Query: 65 DIQVLSNL--GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASR 122
++ + +EGH D GS + L +RA +V Y V G++ R
Sbjct: 85 SFSLMDEITKVFIDNPRIKKVSVEGHTDSDGSSRYNKKLSQKRADSVMAYLVEHGVAQER 144
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ +G+E P ++ KNRR +
Sbjct: 145 LEAVGHGEEKPIADNDTDEGKEKNRRVEFII 175
>gi|308271290|emb|CBX27898.1| hypothetical protein N47_G32220 [uncultured Desulfobacterium sp.]
Length = 310
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 53/133 (39%), Gaps = 1/133 (0%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD 82
+ + + ++ V F ++ ++ P+ L + L
Sbjct: 177 RTAAAQAELAKLAAVKEEERGLVVTLSGGVLFQSAKSTLLPSAQVKLDQVAKALLSIPAR 236
Query: 83 -FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
++EGH D +GS + + L RRA AV +Y V +G A R++ G+ P +
Sbjct: 237 NLIVEGHTDSIGSESYNQGLSQRRADAVRDYLVQKGYPADRIQARGKGEGSPIADNTSPE 296
Query: 142 AYAKNRRAIVFLK 154
A NRR + ++
Sbjct: 297 GRANNRRVEIVIE 309
>gi|296536906|ref|ZP_06898945.1| peptidoglycan-associated lipoprotein [Roseomonas cervicalis ATCC
49957]
gi|296262766|gb|EFH09352.1| peptidoglycan-associated lipoprotein [Roseomonas cervicalis ATCC
49957]
Length = 130
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 47/124 (37%), Positives = 70/124 (56%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
QE ++VGD VFFDT S S+R L +W + L+EGHAD
Sbjct: 7 AAGSVRPGSQEDLVANVGDRVFFDTDSSSVRGDQRATLERQAAWLAQYPQVQVLMEGHAD 66
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
E G+R ++ALG RRA + + VA+G++ +R+ SYGK+ P+ G DA+A+NRRA+
Sbjct: 67 ERGTREYNLALGQRRANSARDVLVAQGVAPARISTISYGKDRPAALGSTPDAWAQNRRAV 126
Query: 151 VFLK 154
++
Sbjct: 127 TVVR 130
>gi|104782672|ref|YP_609170.1| OmpA family outer membrane protein [Pseudomonas entomophila L48]
gi|95111659|emb|CAK16380.1| putative outer membrane protein; OmpA family [Pseudomonas
entomophila L48]
Length = 269
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 58/144 (40%), Gaps = 2/144 (1%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
++ + + + L ++GD V FDT ++ + + L +
Sbjct: 121 AKLASVQQQGKWVEAQIVALASEQTDRGLVMTLGD-VLFDTGEADLKNSASRTALKLVQF 179
Query: 76 LEKHDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
L+ + + IEG+ D G+ ++ L RA AV + V G+ R++V YG + P
Sbjct: 180 LQLNPRRVVRIEGYTDSTGNPEDNLKLSRDRAQAVADMLVDLGVDEKRIQVEGYGDQYPV 239
Query: 135 VYGHDEDAYAKNRRAIVFLKGCRA 158
E A+NRR + +
Sbjct: 240 EANASERGRAQNRRVEIVFSDDKG 263
>gi|299532464|ref|ZP_07045855.1| OmpA/MotB [Comamonas testosteroni S44]
gi|298719549|gb|EFI60515.1| OmpA/MotB [Comamonas testosteroni S44]
Length = 214
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FFD ++PA L +L ++ + + +I GH D +GS + L +R
Sbjct: 99 VTYSADAFFDFDKSVLKPAGKAKLDDLTGKIKDINLEVIIAVGHTDSVGSDAYNQKLSVR 158
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
RA AV Y V++GI SR+ G++ P A+NRR + + G +A
Sbjct: 159 RAEAVKAYLVSKGIEKSRVYTEGKGEKQPVADNKTAAGRAQNRRVEIEVVGTKA 212
>gi|224417733|ref|ZP_03655739.1| CADF precursor [Helicobacter canadensis MIT 98-5491]
gi|253827077|ref|ZP_04869962.1| outer membrane protein OprF [Helicobacter canadensis MIT 98-5491]
gi|313141275|ref|ZP_07803468.1| cadf [Helicobacter canadensis MIT 98-5491]
gi|253510483|gb|EES89142.1| outer membrane protein OprF [Helicobacter canadensis MIT 98-5491]
gi|313130306|gb|EFR47923.1| cadf [Helicobacter canadensis MIT 98-5491]
Length = 306
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 1/104 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
+V F T S + P + + ++ + D +I GH D GS + L +RA +V
Sbjct: 199 NVEFPTDSAVVDPVYYPEIQDFAKYMDQNPDKTAVINGHTDSTGSAAYNQKLSEKRAQSV 258
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
N V +GIS+ R++ YG+E P + KNRR +
Sbjct: 259 KNEIVKQGISSERLEAKGYGEEKPIASNKTREGRQKNRRVEAEV 302
>gi|83746716|ref|ZP_00943765.1| Hypothetical Protein RRSL_03628 [Ralstonia solanacearum UW551]
gi|207721381|ref|YP_002251822.1| bacterial outer membrane protein [Ralstonia solanacearum MolK2]
gi|207742640|ref|YP_002259032.1| bacterial outer membrane protein [Ralstonia solanacearum IPO1609]
gi|83726669|gb|EAP73798.1| Hypothetical Protein RRSL_03628 [Ralstonia solanacearum UW551]
gi|206586540|emb|CAQ17127.1| bacterial outer membrane protein [Ralstonia solanacearum MolK2]
gi|206594034|emb|CAQ60961.1| bacterial outer membrane protein [Ralstonia solanacearum IPO1609]
Length = 209
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 60/140 (42%), Gaps = 1/140 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
I + T ++ ++ V FDT S I+P+ L ++ +
Sbjct: 70 AIKSKLTGDTAGTGTQISEQPDGSLKLNIPSQVSFDTDSAMIKPSFRGPLDSVAETLTQH 129
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ + GH D G+ N +++L RRA +V +Y RG++ +R+ G+ P
Sbjct: 130 PELAASVVGHTDSTGNPNYNMSLSQRRAQSVTSYLTDRGVARNRLTAEGRGQTQPVGDNA 189
Query: 139 DEDAYAKNRRAIVFLKGCRA 158
E A+NRR ++LK +
Sbjct: 190 TEAGRAQNRRVEIYLKPIQG 209
>gi|262197216|ref|YP_003268425.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
gi|262080563|gb|ACY16532.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
Length = 374
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLR 104
+ +++F+T +I+P +L+ + + + + + IEGH D GS ++ L
Sbjct: 263 IEIKQTIYFETGKNTIKPVSFALLNEVATVLTDNPEIEVRIEGHTDSRGSAEFNMELSQS 322
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA +V ++ + +G+ R++ YG+ P + A+NRR +
Sbjct: 323 RAESVRSFLIDKGVDGDRLEAKGYGESAPIANNNTRAGQAQNRRVEFVI 371
>gi|255264641|ref|ZP_05343983.1| inner membrane lipoprotein YiaD [Thalassiobium sp. R2A62]
gi|255106976|gb|EET49650.1| inner membrane lipoprotein YiaD [Thalassiobium sp. R2A62]
Length = 223
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 52/126 (41%), Gaps = 1/126 (0%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEG 87
S + ++ + S+ + F T S ++ L+ L + + + + G
Sbjct: 95 QSLGGNVGITNTGSELIVSLPQDILFATDSSTLTGGLQSDLNALANNLNQYPNTTVNVIG 154
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
H D +G + L RRA AV N + G+S+ R+ G+ P ++ A+NR
Sbjct: 155 HTDNVGDAGYNDGLSTRRATAVANVLLNAGVSSGRINAFGRGEAQPIATNLTDEGRAQNR 214
Query: 148 RAIVFL 153
R + +
Sbjct: 215 RVEIVI 220
>gi|221640500|ref|YP_002526762.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides KD131]
gi|221161281|gb|ACM02261.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides KD131]
Length = 652
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 44/131 (33%), Gaps = 1/131 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGH 88
+ + G + F+ S I + L L + I GH
Sbjct: 475 EAALPTPQECMSRIRRVLAGQKITFEPGSAEIDRSARGTLDGLAEVFKVCKAMPLEISGH 534
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D GS + AL RA AV R + RMK YG+E P +E+ NRR
Sbjct: 535 TDSQGSEGGNKALSQARAEAVLLALQGRRVDVGRMKAVGYGEERPIADNGNEEGREANRR 594
Query: 149 AIVFLKGCRAN 159
L G N
Sbjct: 595 IEFTLLGEDGN 605
>gi|85711329|ref|ZP_01042388.1| Outer membrane protein and related
peptidoglycan-associated(lipo)proteins [Idiomarina
baltica OS145]
gi|85694830|gb|EAQ32769.1| Outer membrane protein and related
peptidoglycan-associated(lipo)proteins [Idiomarina
baltica OS145]
Length = 188
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/157 (21%), Positives = 64/157 (40%), Gaps = 7/157 (4%)
Query: 4 STIFIILSAITMMSISGIDNLDTKISSP------DTVLNESSLQEQFSSSVGDSVFFDTS 57
+ ++ +A+ ++ S I N K + + + + ++ F +
Sbjct: 27 KSRYLWGAAVGALAGSAIGNYMDKQEEAFRDELSGSGVQVIRDGDNIRLQLPGNITFASE 86
Query: 58 SYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
S +I VL ++ + + + +IEGH D GS + + L L RA AV NY V
Sbjct: 87 SANISQNFYPVLEDVAAVLNKYNKTTMMIEGHTDSTGSADYNQQLSLNRANAVRNYLVGY 146
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G+ + R+ +G+ P +NRR + +
Sbjct: 147 GVDSRRVTTQGFGESQPIATNDTAQGRQQNRRVELRI 183
>gi|171060845|ref|YP_001793194.1| OmpA/MotB domain-containing protein [Leptothrix cholodnii SP-6]
gi|170778290|gb|ACB36429.1| OmpA/MotB domain protein [Leptothrix cholodnii SP-6]
Length = 229
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 1/132 (0%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD 82
+ + + Q ++ FD +++P + VL L L+
Sbjct: 94 KAMEAATQGTGIDVVRTTDNQLKVNIPADFSFDVGRSAVKPVMVPVLDKLAQGLDA-TVQ 152
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
+ GH D GS + L L RA AV +Y G+ A+R++V G+ P D
Sbjct: 153 VQVIGHTDSSGSDAVNNPLSLDRAEAVRDYLSRHGVPAARIQVEGRGEREPVADNATPDG 212
Query: 143 YAKNRRAIVFLK 154
A+NRR +FL+
Sbjct: 213 RAQNRRVEIFLR 224
>gi|312962752|ref|ZP_07777240.1| peptidoglycan-associated lipoprotein [Pseudomonas fluorescens WH6]
gi|311282969|gb|EFQ61562.1| peptidoglycan-associated lipoprotein [Pseudomonas fluorescens WH6]
Length = 166
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/135 (29%), Positives = 72/135 (53%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+ G ++ + SL E+ + + +F+ S ++P ++ L L
Sbjct: 30 AGEGAAVDPNAGYGANSGAVDGSLSEEAALRAITTFYFEYDSSDLKPEAMRALDVHAKDL 89
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ + ++EG+ DE G+R ++ALG RRA AV Y V +G++ ++++ SYGKE P
Sbjct: 90 KANGARVVLEGNTDERGTREYNMALGERRAKAVQRYLVLQGVAPGQLELVSYGKERPVAT 149
Query: 137 GHDEDAYAKNRRAIV 151
GHDE ++A+NRR +
Sbjct: 150 GHDEQSWAQNRRVEL 164
>gi|108757927|ref|YP_633347.1| OmpA domain-containing protein [Myxococcus xanthus DK 1622]
gi|108461807|gb|ABF86992.1| OmpA domain protein [Myxococcus xanthus DK 1622]
Length = 476
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 51/143 (35%), Gaps = 10/143 (6%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDS-------VFFDTSSYS-IRPADIQVLSNL 72
+D LD P ++ + + F + S+ VL ++
Sbjct: 332 VDRLDACPEEPGVQEERGCAKQYKMVVIKRDRIEIKKQILFSSGSHKIYGKQSTAVLDDV 391
Query: 73 GS--WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
IEGH D +G+ S++ L RRA AV + RGI R++ +G+
Sbjct: 392 AQALRDAPWIKRIRIEGHTDSMGNDASNLRLSQRRADAVMAQLLRRGIDPGRIQAVGFGE 451
Query: 131 EMPSVYGHDEDAYAKNRRAIVFL 153
P + A NRR +
Sbjct: 452 TQPIAPNSTKTGRAMNRRTEFKV 474
>gi|70729207|ref|YP_258943.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
gi|68343506|gb|AAY91112.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
Length = 270
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 58/140 (41%), Gaps = 2/140 (1%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ + L + ++GD V FDT ++ + + + + +L+ +
Sbjct: 126 SVQQQGKWLEEQIISLATTQTDRGLVMTLGD-VLFDTGEAELKNSANRTVLKVVQFLQLN 184
Query: 80 DCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ IEG+ D G R S++ L RA AV + V GI R++V YG + P
Sbjct: 185 PKRVVRIEGYTDNTGERQSNLQLSKDRAQAVADVLVDLGIDEKRIQVEGYGDDYPVEANA 244
Query: 139 DEDAYAKNRRAIVFLKGCRA 158
E A+NRR + +
Sbjct: 245 SERGRAQNRRVEIVFSDEKG 264
>gi|330951777|gb|EGH52037.1| thrombospondin type 3 repeat-containing OmpA/MotB protein
[Pseudomonas syringae Cit 7]
Length = 344
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 56/138 (40%), Gaps = 4/138 (2%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD ++P + NL ++++
Sbjct: 203 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMQQ 262
Query: 79 H-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVY 136
+ +EGH D +G + L RRA AV V + A+R+ YG+ P
Sbjct: 263 YPQTTTTVEGHTDSVGPDAYNQKLSERRANAVKQVLVNQYGVGANRVNSVGYGESRPVAD 322
Query: 137 GHDEDAYAKNRRAIVFLK 154
E A NRR ++
Sbjct: 323 NATEAGRAVNRRVEAEVE 340
>gi|258543662|ref|YP_003189095.1| peptidoglycan-associated lipoprotein [Acetobacter pasteurianus IFO
3283-01]
gi|256634740|dbj|BAI00716.1| peptidoglycan-associated lipoprotein [Acetobacter pasteurianus IFO
3283-01]
gi|256637796|dbj|BAI03765.1| peptidoglycan-associated lipoprotein [Acetobacter pasteurianus IFO
3283-03]
gi|256640850|dbj|BAI06812.1| peptidoglycan-associated lipoprotein [Acetobacter pasteurianus IFO
3283-07]
gi|256643905|dbj|BAI09860.1| peptidoglycan-associated lipoprotein [Acetobacter pasteurianus IFO
3283-22]
gi|256646960|dbj|BAI12908.1| peptidoglycan-associated lipoprotein [Acetobacter pasteurianus IFO
3283-26]
gi|256650013|dbj|BAI15954.1| peptidoglycan-associated lipoprotein [Acetobacter pasteurianus IFO
3283-32]
gi|256653003|dbj|BAI18937.1| peptidoglycan-associated lipoprotein [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256656057|dbj|BAI21984.1| peptidoglycan-associated lipoprotein [Acetobacter pasteurianus IFO
3283-12]
Length = 160
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 8/154 (5%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDT------KISSPDTVLNESSLQEQFSSSVGDSVFF 54
M+ + L + ++S DN +T + P + ++VGD VF+
Sbjct: 1 MRLK-VVAALGMVALLSACAHDNANTGASNSAASTQPTISGPVPGSEADLVANVGDRVFY 59
Query: 55 DTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYF 113
D + +R L W + + + G+ D+ G+ +IALG RRA A +Y
Sbjct: 60 DLNKSGLRDDAKDTLQKQADWLAKYPQVNVEVAGNCDDRGTEEYNIALGQRRANAARDYL 119
Query: 114 VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
VA+G+++SR+ SYGK+ P+ G DEDA+A+NR
Sbjct: 120 VAKGVASSRISTISYGKDRPTALGDDEDAWAQNR 153
>gi|163732619|ref|ZP_02140064.1| OmpA family domain protein [Roseobacter litoralis Och 149]
gi|161393979|gb|EDQ18303.1| OmpA family domain protein [Roseobacter litoralis Och 149]
Length = 210
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 55/124 (44%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHA 89
+ + ++ ++ S+ + F T S+S+RP L + L+ + + GH
Sbjct: 83 GNDDVQITNTGDRLIVSLPQDLLFATDSFSVRPDLQNDLYTVAGSLQNYPASTIQVIGHT 142
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G + L RRA +V + G+++SR++ G+ P +E A+NRR
Sbjct: 143 DSDGDAAYNQQLSERRAGSVAGILMNAGVTSSRLQTIGRGESQPVASNLNETGKAQNRRV 202
Query: 150 IVFL 153
+ +
Sbjct: 203 EIVI 206
>gi|163869125|ref|YP_001610364.1| peptidoglycan-associated lipoprotein [Bartonella tribocorum CIP
105476]
gi|161018811|emb|CAK02369.1| peptidoglycan-associated lipoprotein [Bartonella tribocorum CIP
105476]
Length = 172
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 54/157 (34%), Positives = 81/157 (51%), Gaps = 7/157 (4%)
Query: 5 TIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQ------FSSSVGDSVFFDTSS 58
++ I+L + G N+ +N+++L + F+ +VGD VFF S
Sbjct: 11 SLAILLFFSLCLGGCGKKNIGALDGMHGAYMNDAALNQGPGSGQEFTVNVGDRVFFSLDS 70
Query: 59 YSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG 117
S+ ++L+ WL +IEGHADE G+R ++ALG RRA AV NY V+ G
Sbjct: 71 SSLDADAERILTRQAEWLLHYPYYSIMIEGHADERGTREYNLALGQRRAVAVRNYLVSLG 130
Query: 118 ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+SA R++ SYGKE P D + +NRRA+ L
Sbjct: 131 VSAQRIQTISYGKERPVAVCDDISCWNQNRRAVTTLS 167
>gi|26990890|ref|NP_746315.1| OmpA/MotB domain protein [Pseudomonas putida KT2440]
gi|148546893|ref|YP_001266995.1| OmpA/MotB domain-containing protein [Pseudomonas putida F1]
gi|24985904|gb|AAN69779.1|AE016614_5 OmpA family protein [Pseudomonas putida KT2440]
gi|148510951|gb|ABQ77811.1| OmpA/MotB domain protein [Pseudomonas putida F1]
gi|313497955|gb|ADR59321.1| OmpA/MotB domain protein [Pseudomonas putida BIRD-1]
Length = 270
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 60/144 (41%), Gaps = 2/144 (1%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
++ + + S L ++GD V FDT S ++ + + + L +
Sbjct: 122 AKLASVQQQGKWVESQIAALASEQADRGLVMTLGD-VLFDTGSADLKNSASRTVLKLVQF 180
Query: 76 LEKHDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
L+ + + IEG+ D G+ ++ L RA +V + V GI R++V YG + P
Sbjct: 181 LQLNPRRVVRIEGYTDSTGAGEENLKLSRDRAQSVADMLVDLGIDEKRLQVEGYGDQYPI 240
Query: 135 VYGHDEDAYAKNRRAIVFLKGCRA 158
E A+NRR + +
Sbjct: 241 EANASERGRAQNRRVEIVFSDDKG 264
>gi|254282997|ref|ZP_04957965.1| outer membrane fibronectin-binding protein [gamma proteobacterium
NOR51-B]
gi|219679200|gb|EED35549.1| outer membrane fibronectin-binding protein [gamma proteobacterium
NOR51-B]
Length = 227
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 52/132 (39%), Gaps = 2/132 (1%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
D+ D +P + GD + F S + VL++ +++
Sbjct: 93 TDDRDKCPGTPAGQAVD-DNGCALIVFSGDVLRFAFDSAELPADAASVLADAVEFVDAMG 151
Query: 81 -CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
++ GHAD G + +L RRA AV + V GI +++ YG+ MP
Sbjct: 152 GKKLIVSGHADSSGPDAYNQSLSQRRADAVKAFLVESGIPERQLEAVGYGETMPVADNAT 211
Query: 140 EDAYAKNRRAIV 151
A+NRR +
Sbjct: 212 ASGRAQNRRVEI 223
>gi|325914015|ref|ZP_08176371.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Xanthomonas vesicatoria ATCC 35937]
gi|325539784|gb|EGD11424.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Xanthomonas vesicatoria ATCC 35937]
Length = 241
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 1/130 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGH 88
+ +T ++ + + ++ D + FD +++P L+ + S E + + GH
Sbjct: 102 TANTGIDVQRQGDNITLNLPDGITFDFGKSALKPQFYSALNGVASTLREYNQTMVEVVGH 161
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D +GS + L RA AV Y A+G+ RM+ GK P + A+NRR
Sbjct: 162 TDSVGSDAVNQRLSEERAGAVAQYLTAQGVQRERMETMGAGKRYPIADNSTDAGRAQNRR 221
Query: 149 AIVFLKGCRA 158
+ L RA
Sbjct: 222 VEIRLIPLRA 231
>gi|300770792|ref|ZP_07080670.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33861]
gi|300762349|gb|EFK59167.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33861]
Length = 438
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 54/137 (39%), Gaps = 3/137 (2%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+ + +TK+ V E + ++ FD +IR L + S L
Sbjct: 304 AGCPLPVAETKVVEKIVVTEE---DRKVVDEAIKNLEFDLGKSTIRSTSYPSLDRVASLL 360
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ + + GH D GS +++ L RA AV Y +G + SR++ T YG P
Sbjct: 361 IEKNFSLKLAGHTDNTGSMKTNLRLSKERAEAVKAYLSGKGANPSRIEATGYGPNQPIAS 420
Query: 137 GHDEDAYAKNRRAIVFL 153
+ +NRR L
Sbjct: 421 NATAEGRQQNRRVEFTL 437
>gi|146306310|ref|YP_001186775.1| OmpA domain-containing protein [Pseudomonas mendocina ymp]
gi|330502226|ref|YP_004379095.1| OmpA domain-containing protein [Pseudomonas mendocina NK-01]
gi|145574511|gb|ABP84043.1| OmpA domain protein [Pseudomonas mendocina ymp]
gi|328916512|gb|AEB57343.1| OmpA domain-containing protein [Pseudomonas mendocina NK-01]
Length = 166
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/135 (29%), Positives = 72/135 (53%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+ +T + SL E+ + + +F+ S ++ ++ L L
Sbjct: 30 AAGEGAVDPNAGYGANTGAVDGSLSEEAALRAITTFYFEYDSSDLKAEAMRALDVHAKDL 89
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ + ++EGHADE G+R ++ALG RRA AV Y V +G+S +++++ SYG+E P
Sbjct: 90 KGNGARVVLEGHADERGTREYNMALGERRAKAVQRYLVLQGVSPAQLELVSYGEERPVAT 149
Query: 137 GHDEDAYAKNRRAIV 151
G+DE ++A+NRR +
Sbjct: 150 GNDEQSWAQNRRVEL 164
>gi|49476137|ref|YP_034178.1| peptidoglycan-associated lipoprotein [Bartonella henselae str.
Houston-1]
gi|49238945|emb|CAF28242.1| Peptidoglycan-associated lipoprotein [Bartonella henselae str.
Houston-1]
Length = 174
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 52/168 (30%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 1 MQYST------IFIILSAITMMSISGIDNLDTKISSPDTV--------LNESSLQEQFSS 46
M++ + ++L + G +S + + F+
Sbjct: 1 MRFLKNIIFQPLTVVLFFSLSLVGCGDKKNVGALSGINGAFLNNAGFNQATLGSSQDFTV 60
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRR 105
+VGD VFF S SI P +L WL +IEGHADE G+R ++ALG RR
Sbjct: 61 NVGDRVFFSLDSSSIEPDAEAILMRQAEWLLRYPFYSIVIEGHADERGTREYNLALGQRR 120
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
A AV NY ++ G+SA R++ SYGKE P D + +NRRA+ +
Sbjct: 121 AVAVRNYLISLGVSAQRIQTISYGKERPVAVCDDISCWNQNRRAVTTI 168
>gi|307293986|ref|ZP_07573830.1| OmpA/MotB domain protein [Sphingobium chlorophenolicum L-1]
gi|306880137|gb|EFN11354.1| OmpA/MotB domain protein [Sphingobium chlorophenolicum L-1]
Length = 226
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 56/133 (42%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ + + ++ + + + F T S +++P L+++ S L ++
Sbjct: 84 QEKKLREQTAGSGVDVIRDGDNLVLRMPSGITFATDSSAVQPQFQPTLNDVASVLAQYPK 143
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ GH D G+ + L RRA AV +Y + G+ ++R+ +G+ P
Sbjct: 144 TYIDVYGHTDSDGTDVYNQGLSERRAQAVGDYLTSHGVQSARIATRGFGETQPIASNATA 203
Query: 141 DAYAKNRRAIVFL 153
+ A NRR + +
Sbjct: 204 EGKASNRRVEIKI 216
>gi|120610159|ref|YP_969837.1| hypothetical protein Aave_1472 [Acidovorax citrulli AAC00-1]
gi|120588623|gb|ABM32063.1| OmpA/MotB domain protein [Acidovorax citrulli AAC00-1]
Length = 452
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 48/127 (37%), Gaps = 4/127 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ ++ + ++ ++ FD +S ++P + V+ + S L + ++ G++D
Sbjct: 297 EGLVEVNDQADRSIVTLRGDGLFDPASTEVKPRYVAVIQRIASALNEVSGKVVVNGYSDN 356
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
S+ L RA AV SR++ + P + A NR
Sbjct: 357 QPIRTARFPSNWHLSQERAQAVAAMLQRTIADGSRLRAEGRAESDPIAPNSTPEGRALNR 416
Query: 148 RAIVFLK 154
R + L
Sbjct: 417 RVEIVLM 423
>gi|56698398|ref|YP_168771.1| OmpA domain-containing protein [Ruegeria pomeroyi DSS-3]
gi|56680135|gb|AAV96801.1| OmpA domain protein [Ruegeria pomeroyi DSS-3]
Length = 221
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHA 89
+ + ++ ++ SV + + FDT S ++RP L + + + + GH
Sbjct: 94 ANDGITITNTGDRLIVSVPNDITFDTDSSTVRPGLRSDLQKVAAHLVRYPQSSVQVIGHT 153
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G + L RRA AV + A G++ R+ G+ P + A+NRR
Sbjct: 154 DSDGEAAYNQGLSERRAGAVADILQAGGVTYDRISTLGMGENSPIASNLTPEGKARNRRV 213
Query: 150 IVFL 153
+ +
Sbjct: 214 EIVV 217
>gi|77457448|ref|YP_346953.1| OmpA/MotB [Pseudomonas fluorescens Pf0-1]
gi|77381451|gb|ABA72964.1| putative OmpA family protein [Pseudomonas fluorescens Pf0-1]
Length = 240
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 53/126 (42%), Gaps = 3/126 (2%)
Query: 31 PDTVLNESSLQEQFSSSVGD--SVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEG 87
P T + ++ D +V FD ++PA L L + G
Sbjct: 113 PVTEKPAEPAPQTEVITLNDAGNVLFDFDKSDLKPAAKSQLDTLMDKLRNADVVSIKVIG 172
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
H D GS + AL RRA +V Y +++G++ +++ G+ P + ++ A+NR
Sbjct: 173 HTDSKGSDAYNQALSERRASSVAEYLLSQGLAPNKLTSEGRGESEPVADNNTDEGRAQNR 232
Query: 148 RAIVFL 153
R + +
Sbjct: 233 RVELHI 238
>gi|171320878|ref|ZP_02909877.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
gi|171093863|gb|EDT38995.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
Length = 214
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 54/136 (39%), Gaps = 1/136 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
I N ++ +V SV F T+ Y+I PA +L++L + +
Sbjct: 74 AIKNKLAPSAAQTGTQVTEQPDGSLKLNVPSSVTFATNQYAITPAFTPLLNDLATTLNQN 133
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ G+ D GS + L RA +V N RG++ R+ G P
Sbjct: 134 PQLTGSVVGYTDSTGSAQLNQTLSQNRAQSVVNALGQRGVAGGRLSAQGMGASNPIADNA 193
Query: 139 DEDAYAKNRRAIVFLK 154
+ A+NRR ++L+
Sbjct: 194 TDAGRAQNRRVEIYLR 209
>gi|332294873|ref|YP_004436796.1| OmpA/MotB domain protein [Thermodesulfobium narugense DSM 14796]
gi|332177976|gb|AEE13665.1| OmpA/MotB domain protein [Thermodesulfobium narugense DSM 14796]
Length = 243
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 4/131 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ +P+ + + S + D + FD+ +++P +L+ + + L+K D + +E
Sbjct: 110 QSLNPNQFSVIQTERGYLISILTDKILFDSGKANLKPDAFPLLTKIAAVLKKIDNEVYVE 169
Query: 87 GHADELGSR----NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
GH D + S+ L RA +V YF+ +GIS SR+ + Y P
Sbjct: 170 GHTDNVPIHTVEFPSNWELSAARAASVAKYFIEQGISPSRLVIAGYADTRPVASNDTPQG 229
Query: 143 YAKNRRAIVFL 153
KNRR + +
Sbjct: 230 RQKNRRIDILI 240
>gi|319790576|ref|YP_004152209.1| OmpA/MotB domain protein [Thermovibrio ammonificans HB-1]
gi|317115078|gb|ADU97568.1| OmpA/MotB domain protein [Thermovibrio ammonificans HB-1]
Length = 251
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/145 (20%), Positives = 60/145 (41%), Gaps = 7/145 (4%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQE------QFSSSVGDSVFFDTSSYSIRPADIQVL 69
+ + +D+ + + V+++ + + + DSV F +S ++P ++ L
Sbjct: 95 LGVQPVDHTNPAVKPQAPVISDKRPKAVVKEPGRVKVVLKDSVLFGLNSAELKPEAVKEL 154
Query: 70 SNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
+ L+++ ++ G+ D GS ++ L RA AV V G+ R+ V
Sbjct: 155 QRIAQTLKENPKTTVVVVGYTDNTGSLKYNLKLSKERAEAVKKVLVEAGVRPERILVFGC 214
Query: 129 GKEMPSVYGHDEDAYAKNRRAIVFL 153
G + P A NRR + +
Sbjct: 215 GPKNPIAPNDTPQHRALNRRVEILI 239
>gi|300703368|ref|YP_003744970.1| outer membrane lipoprotein [Ralstonia solanacearum CFBP2957]
gi|299071031|emb|CBJ42340.1| putative outer membrane lipoprotein [Ralstonia solanacearum
CFBP2957]
Length = 209
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 60/140 (42%), Gaps = 1/140 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
I + T ++ ++ V FDT S I+P+ L ++ +
Sbjct: 70 AIKSKLTGDTAGTGTQISEQPDGSLKLNIPSQVSFDTDSAMIKPSFRGPLDSVAETLTQH 129
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ + GH D G+ N +++L RRA +V +Y RG++ +R+ G+ P
Sbjct: 130 PELAASVVGHTDSTGNPNYNMSLSQRRAQSVTSYLTDRGVARTRLTAEGRGQTQPVGDNA 189
Query: 139 DEDAYAKNRRAIVFLKGCRA 158
E A+NRR ++LK +
Sbjct: 190 TEAGRAQNRRVEIYLKPIQG 209
>gi|218673547|ref|ZP_03523216.1| outer membrane lipoprotein [Rhizobium etli GR56]
Length = 180
Score = 85.6 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++ FD +++P L+++ L K + + GH D
Sbjct: 52 GTGISVTRNGDNIILNMPSNITFDVDQDAVKPGFYPTLNSVAIVLRKFNRTLIDVNGHTD 111
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + L RRA +V +Y +GI R+ +G P E A+NRR
Sbjct: 112 STGSLQHNQDLSQRRALSVADYLGGQGIDQRRVSAVGFGPSQPVASNASEAGRAQNRRVE 171
Query: 151 VFL 153
+ +
Sbjct: 172 IQI 174
>gi|297544067|ref|YP_003676369.1| OmpA/MotB domain-containing protein [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296841842|gb|ADH60358.1| OmpA/MotB domain protein [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 239
Score = 85.2 bits (209), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 52/133 (39%), Gaps = 5/133 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
++ + S+ D++ FD S + P + VL +G+ L+ +EG D+
Sbjct: 99 QGMVTSYIDERGLVISLQDTLLFDLGSADVHPEEKDVLIKIGNMLKTLPNHIRVEGFTDD 158
Query: 92 LGSRNS----SIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
L N+ + L + RA V G+ ++ YG+ P V E+ N
Sbjct: 159 LPIHNNKFDSNWELSVIRATNVVKILVHEAGVDPKKISAVGYGEYRPVVPNDSEEHRRLN 218
Query: 147 RRAIVFLKGCRAN 159
RR + + +
Sbjct: 219 RRVDIVIMNAEYD 231
>gi|217978498|ref|YP_002362645.1| type IV / VI secretion system protein, DotU family [Methylocella
silvestris BL2]
gi|217503874|gb|ACK51283.1| type IV / VI secretion system protein, DotU family [Methylocella
silvestris BL2]
Length = 494
Score = 85.2 bits (209), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 46/132 (34%), Gaps = 5/132 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
++ + + VGD V F + +++P + + LEK I
Sbjct: 359 APEIAAKKVDATQTATKIRIIVGDLVLFPSGQANVKPQFEPIAKRIAQTLEKEPGAITIV 418
Query: 87 GHADE-----LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
GH D +S+ L + RA AV +R++V E P
Sbjct: 419 GHTDNVKLQATSPFDSNWTLSMARAKAVAAVLKPGLSEPARIEVDGKADEQPIAPNDTPA 478
Query: 142 AYAKNRRAIVFL 153
A+NRR + L
Sbjct: 479 GRAQNRRVEIML 490
>gi|169831941|ref|YP_001717923.1| OmpA/MotB domain-containing protein [Candidatus Desulforudis
audaxviator MP104C]
gi|169638785|gb|ACA60291.1| OmpA/MotB domain protein [Candidatus Desulforudis audaxviator
MP104C]
Length = 257
Score = 85.2 bits (209), Expect = 2e-15, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 49/121 (40%), Gaps = 5/121 (4%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS--- 94
++ + S+ D+V F T S + P +++ LG L + IEGH D +
Sbjct: 124 TTEERGLVISIQDTVLFATGSADLTPTAREIMDKLGLILLQTPNYIRIEGHTDNVPINTP 183
Query: 95 -RNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
S+ L R+ +V Y +AR R+ T YG+ P +NRR
Sbjct: 184 RFPSNWELSAARSTSVVRYLIARHNFPPERLSATGYGEYRPRDTNDTAQGRQRNRRVDFV 243
Query: 153 L 153
+
Sbjct: 244 V 244
>gi|330811386|ref|YP_004355848.1| OmpA family lipoprotein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327379494|gb|AEA70844.1| Putative OmpA family lipoprotein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 165
Score = 85.2 bits (209), Expect = 2e-15, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 71/130 (54%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+T + SL E+ + + +F+ S ++P ++ L L+ +
Sbjct: 34 AVDPNAGYGANTGAVDGSLSEEAALRAITTFYFEYDSSDLKPEAMRALDVHAKDLKSNGA 93
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
++EG+ DE G+R ++ALG RRA AV Y V +G+S +++++ SYG+E P G+DE
Sbjct: 94 RVVLEGNTDERGTREYNMALGERRAKAVQRYLVLQGVSPAQLELVSYGEERPVATGNDEQ 153
Query: 142 AYAKNRRAIV 151
++A+NRR +
Sbjct: 154 SWAQNRRVEL 163
>gi|313105860|ref|ZP_07792123.1| Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas
aeruginosa 39016]
gi|310878625|gb|EFQ37219.1| Peptidoglycan associated lipoprotein OprL precursor [Pseudomonas
aeruginosa 39016]
Length = 169
Score = 85.2 bits (209), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/139 (28%), Positives = 71/139 (51%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+ ++ + SL ++ + + +F+ S ++P ++ L
Sbjct: 30 ASGEGANGGVDPNAGYGANSGAVDGSLSDEAALRAITTFYFEYDSSDLKPEAMRALDVHA 89
Query: 74 SWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
L+ ++EGH DE G+R ++ALG RRA AV Y V +G+S +++++ SYGKE P
Sbjct: 90 KDLKGSGQRVVLEGHTDERGTREYNMALGERRAKAVQRYLVLQGVSPAQLELVSYGKERP 149
Query: 134 SVYGHDEDAYAKNRRAIVF 152
GHDE ++A+NRR +
Sbjct: 150 VATGHDEQSWAQNRRVELK 168
>gi|148827586|ref|YP_001292339.1| hypothetical protein CGSHiGG_05065 [Haemophilus influenzae PittGG]
gi|148718828|gb|ABQ99955.1| hypothetical protein CGSHiGG_05065 [Haemophilus influenzae PittGG]
Length = 153
Score = 85.2 bits (209), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 3/151 (1%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSI 61
++ ++ ++ ++ N D + S+ + ++V+F Y I
Sbjct: 3 KFVKSLLVAGSVAALAACSSSNNDAAGNGVAQTFGGYSVAD--LQQRYNTVYFGFDKYDI 60
Query: 62 RPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA 120
+Q+L + L+EG+ DE G+ +IALG RRA AV Y +G+ A
Sbjct: 61 TGEYVQILDAHAAYLNATPAAKVLVEGNTDERGTPEYNIALGQRRADAVKGYLAGKGVDA 120
Query: 121 SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
++ SYG+E P+V GHDE AY+KNRRA++
Sbjct: 121 GKLGTVSYGEEKPAVLGHDEAAYSKNRRAVL 151
>gi|332968653|gb|EGK07706.1| OmpA family protein [Psychrobacter sp. 1501(2011)]
Length = 217
Score = 85.2 bits (209), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 57/146 (39%), Gaps = 1/146 (0%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
+L + + + V + Q + ++ F S +I P+
Sbjct: 65 VLGGAVGTYMENQKRQLEQQMAGTGVEVKHDGQGNIDLIMPGNITFAHDSTNINPSFYNT 124
Query: 69 LSNLG-SWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
L L + + + + GH D +G+ + L RRA +V Y V RG+S +R++
Sbjct: 125 LDKLASTMNQYNQTTVTVMGHTDSVGNPTYNQGLSQRRAQSVAGYLVNRGVSGARIQTLG 184
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFL 153
YG+ P E +NRR + L
Sbjct: 185 YGQSQPIADNSTEQGRMQNRRVEIKL 210
>gi|241764375|ref|ZP_04762401.1| OmpA/MotB domain protein [Acidovorax delafieldii 2AN]
gi|241366218|gb|EER60782.1| OmpA/MotB domain protein [Acidovorax delafieldii 2AN]
Length = 215
Score = 85.2 bits (209), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 51/134 (38%), Gaps = 2/134 (1%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FL 84
+ + + + Q + + F I+P VL L H
Sbjct: 81 EQATRGTGIAVSQTQDNQLKLDIPSDISFAVGRADIQPNFAPVLDRFAEGLRAHPETDVR 140
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
I GH D GS + L + RA + NY + RG+ R+ V G+ P + +
Sbjct: 141 IVGHTDNTGSDAVNDPLSVNRASSTRNYLMNRGVDGRRISVEGMGERQPIATNATAEGRS 200
Query: 145 KNRRAIVFLKGCRA 158
+NRR +F+ G R+
Sbjct: 201 RNRRVEIFV-GERS 213
>gi|197106554|ref|YP_002131931.1| OmpA family protein [Phenylobacterium zucineum HLK1]
gi|196479974|gb|ACG79502.1| OmpA family protein [Phenylobacterium zucineum HLK1]
Length = 186
Score = 85.2 bits (209), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 67/138 (48%), Gaps = 4/138 (2%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDC 81
+ + + F +VGD V+FD + +R +L W
Sbjct: 49 APTQPPVAQQPLAPVPGSAQDFVVNVGDRVYFDLDQHDVRTDARPLLDAQAEWLRRYPQV 108
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
IEG+ADE G+R ++ALG RRA +V +Y V RG+++ R+ S+GKE P G E+
Sbjct: 109 RVRIEGNADERGTREYNLALGARRANSVRDYLVNRGVTSDRISTISFGKEQPLDPGTTEE 168
Query: 142 AYAKNR--RAIVFLKGCR 157
AY KNR R + + G R
Sbjct: 169 AYQKNRNARTAI-VSGAR 185
>gi|170735277|ref|YP_001774391.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
MC0-3]
gi|169821315|gb|ACA95896.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3]
Length = 228
Score = 85.2 bits (209), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 56/144 (38%), Gaps = 1/144 (0%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS 70
A + + + + + ++ FD + + PA +Q L
Sbjct: 82 PATLVFQCGDGNAQASTVDTGAPPPAAVGAPIPKRVTLSGDANFDFNQAILTPAAMQQLD 141
Query: 71 NLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
+ + + I G+ D LG+ + L +RA AV +Y A G++A R ++ YG
Sbjct: 142 KVIANGKGMTFGTVGISGYTDGLGTDTYNRRLSEQRAQAVASYLQAHGLNARRFEIHGYG 201
Query: 130 KEMPSVYGHDEDAYAKNRRAIVFL 153
E P + A+NRR + L
Sbjct: 202 AERPVALNNTALGRAQNRRVEIVL 225
>gi|84501653|ref|ZP_00999825.1| peptidoglycan-associated lipoprotein [Oceanicola batsensis
HTCC2597]
gi|84390274|gb|EAQ02833.1| peptidoglycan-associated lipoprotein [Oceanicola batsensis
HTCC2597]
Length = 171
Score = 85.2 bits (209), Expect = 2e-15, Method: Composition-based stats.
Identities = 54/165 (32%), Positives = 83/165 (50%), Gaps = 12/165 (7%)
Query: 1 MQYST-IFIILSAITMMSISGIDNLDTKISSPDTV----------LNESSLQEQFSSSVG 49
M++ T +++SA+ + + S + D ++ T N+ + F S+VG
Sbjct: 1 MKHLTRAMLVVSALALAACSQSERFDNDVALGGTAGADGAVVPGSANDPTSPLYFQSAVG 60
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
D V F ++ L+ W + D +IEGHADE G+R ++ALG RRA A
Sbjct: 61 DRVLFAVDQSTLSDEARATLNAQAQWLMTNSDYTAVIEGHADEQGTREYNLALGARRANA 120
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
Y + +G++ASR+K +YGKE P E YAKNRRA+ L
Sbjct: 121 AREYLITQGVAASRLKTVTYGKERPIEICSTESCYAKNRRAVTVL 165
>gi|4580972|gb|AAD24559.1|AF117967_1 OprF [Pseudomonas putida]
Length = 338
Score = 85.2 bits (209), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 4/134 (2%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD ++P + NL ++++
Sbjct: 203 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQ 262
Query: 79 H-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVY 136
+ ++EGH D +G + L RRA AV + + ++R+ YG+ P
Sbjct: 263 YPQTTTVVEGHTDSVGPDAYNQKLSERRANAVKQVLTQQYGVESTRVDSVGYGETRPVAD 322
Query: 137 GHDEDAYAKNRRAI 150
E+ A NRR
Sbjct: 323 NATEEGRAVNRRVE 336
>gi|298372336|ref|ZP_06982326.1| OmpA domain protein [Bacteroidetes oral taxon 274 str. F0058]
gi|298275240|gb|EFI16791.1| OmpA domain protein [Bacteroidetes oral taxon 274 str. F0058]
Length = 705
Score = 85.2 bits (209), Expect = 2e-15, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 50/109 (45%), Gaps = 1/109 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLR 104
+ FDT +I+ VL+ + ++ + + +I GH D G+ + ++ L +
Sbjct: 587 KQALHGIQFDTGKSTIKSVSYGVLNMVVDIMKNNPDYNLVIAGHTDSQGNDDFNMTLSDK 646
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA AV Y + +G+ +R++ YG+ P A+NRR +
Sbjct: 647 RAAAVRQYLIDKGVEDARLQSIGYGETKPVATNKTAKGRAQNRRVEFTV 695
>gi|271499765|ref|YP_003332790.1| peptidoglycan-associated lipoprotein [Dickeya dadantii Ech586]
gi|270343320|gb|ACZ76085.1| peptidoglycan-associated lipoprotein [Dickeya dadantii Ech586]
Length = 168
Score = 85.2 bits (209), Expect = 2e-15, Method: Composition-based stats.
Identities = 56/167 (33%), Positives = 85/167 (50%), Gaps = 15/167 (8%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDT----------VLNESSLQEQFSS 46
MQ++ + + L + + + S + + SS + E + +
Sbjct: 1 MQFNKVLKGLMLALPVLAVAACSSNKHANNDQSSLNGGAGMENSGNMSSAEQARLQMQEL 60
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRR 105
+ V+FD Y IRP Q+L ++L + IEGHADE G+ +IALG RR
Sbjct: 61 QRNNIVYFDLDKYDIRPDFAQMLDAHAAFLRSNPSYKVTIEGHADERGTPEYNIALGERR 120
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
A AV Y +G+SA ++ V SYGKE P+V GHDE A++KNRRA++
Sbjct: 121 ANAVQMYLQGKGVSADQISVVSYGKEKPAVLGHDEAAWSKNRRAVLV 167
>gi|330943087|gb|EGH45518.1| thrombospondin type 3 repeat-containing OmpA/MotB protein
[Pseudomonas syringae pv. pisi str. 1704B]
Length = 344
Score = 85.2 bits (209), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 56/138 (40%), Gaps = 4/138 (2%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD ++P + NL ++++
Sbjct: 203 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMQQ 262
Query: 79 H-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVY 136
+ +EGH D +G + L RRA AV V + ASR+ YG+ P
Sbjct: 263 YPQTTTTVEGHTDSVGPDAYNQKLSERRANAVKQVLVNQYGVGASRVNSVGYGESRPVAD 322
Query: 137 GHDEDAYAKNRRAIVFLK 154
E A NRR ++
Sbjct: 323 NATEAGRAVNRRVEAEVE 340
>gi|329848731|ref|ZP_08263759.1| peptidoglycan-associated lipoprotein [Asticcacaulis biprosthecum
C19]
gi|328843794|gb|EGF93363.1| peptidoglycan-associated lipoprotein [Asticcacaulis biprosthecum
C19]
Length = 177
Score = 85.2 bits (209), Expect = 2e-15, Method: Composition-based stats.
Identities = 52/165 (31%), Positives = 75/165 (45%), Gaps = 22/165 (13%)
Query: 5 TIFIILSAITMMSISGIDNLDTKISSPD---------------------TVLNESSLQEQ 43
+ ++ +T ++ +PD V Q+
Sbjct: 2 KVALVAFVMTSVAACTKKAEPVVPKTPDVVTTQPQPTQPTVPPKQTALPPVGVTPGSQQD 61
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALG 102
F +VGD V+FDT SIR VLS +W + IEG+ADE G+R + ALG
Sbjct: 62 FVVNVGDRVYFDTDQSSIRADAQAVLSAQAAWLVRYPAVKIRIEGNADERGTREYNFALG 121
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
RRA AV ++ ++G+ SR+ SYGKE P G DEDA+ +NR
Sbjct: 122 ARRAQAVADFLTSKGVVPSRISTISYGKEQPIATGADEDAWQQNR 166
>gi|237742260|ref|ZP_04572741.1| outer membrane protein [Fusobacterium sp. 4_1_13]
gi|256845531|ref|ZP_05550989.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_36A2]
gi|294785172|ref|ZP_06750460.1| OmpA family protein [Fusobacterium sp. 3_1_27]
gi|229429908|gb|EEO40120.1| outer membrane protein [Fusobacterium sp. 4_1_13]
gi|256719090|gb|EEU32645.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_36A2]
gi|294486886|gb|EFG34248.1| OmpA family protein [Fusobacterium sp. 3_1_27]
Length = 212
Score = 85.2 bits (209), Expect = 2e-15, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHA 89
T ++ V F + S +I L+ + + + G+
Sbjct: 85 QGTQAQVRKDGNALVINLPGGVTFASDSANISSGFYSALNGIAQSLNNYPETRIQVNGYT 144
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G + L RRA AV Y +A+G++++R+ +G P ++ +NRR
Sbjct: 145 DNTGKDAHNQELSQRRANAVAQYLIAQGVASNRIVANGFGSSNPVASNSTQEGRLQNRRV 204
Query: 150 IVFL 153
+ +
Sbjct: 205 EIKI 208
>gi|71736714|ref|YP_274287.1| OprF [Pseudomonas syringae pv. phaseolicola 1448A]
gi|257486264|ref|ZP_05640305.1| OprF [Pseudomonas syringae pv. tabaci ATCC 11528]
gi|289627226|ref|ZP_06460180.1| OprF [Pseudomonas syringae pv. aesculi str. NCPPB3681]
gi|289650179|ref|ZP_06481522.1| OprF [Pseudomonas syringae pv. aesculi str. 2250]
gi|298486585|ref|ZP_07004644.1| outer membrane protein [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|71557267|gb|AAZ36478.1| OprF [Pseudomonas syringae pv. phaseolicola 1448A]
gi|298158911|gb|EFH99972.1| outer membrane protein [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|320324974|gb|EFW81046.1| OprF [Pseudomonas syringae pv. glycinea str. B076]
gi|320329128|gb|EFW85126.1| OprF [Pseudomonas syringae pv. glycinea str. race 4]
gi|330867622|gb|EGH02331.1| OprF [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330881064|gb|EGH15213.1| OprF [Pseudomonas syringae pv. glycinea str. race 4]
gi|330888250|gb|EGH20911.1| OprF [Pseudomonas syringae pv. mori str. 301020]
gi|330988403|gb|EGH86506.1| OprF [Pseudomonas syringae pv. lachrymans str. M301315]
gi|331010567|gb|EGH90623.1| OprF [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 344
Score = 85.2 bits (209), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 56/138 (40%), Gaps = 4/138 (2%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD ++P + NL ++++
Sbjct: 203 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMQQ 262
Query: 79 H-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVY 136
+ +EGH D +G + L RRA AV V + ASR+ YG+ P
Sbjct: 263 YPQTTTTVEGHTDSVGPDAYNQKLSERRANAVKQVLVNQYGVGASRVNSVGYGESRPVAD 322
Query: 137 GHDEDAYAKNRRAIVFLK 154
E A NRR ++
Sbjct: 323 NATEAGRAVNRRVEAEVE 340
>gi|251790481|ref|YP_003005202.1| peptidoglycan-associated outer membrane lipoprotein [Dickeya zeae
Ech1591]
gi|247539102|gb|ACT07723.1| peptidoglycan-associated lipoprotein [Dickeya zeae Ech1591]
Length = 168
Score = 85.2 bits (209), Expect = 2e-15, Method: Composition-based stats.
Identities = 55/167 (32%), Positives = 85/167 (50%), Gaps = 15/167 (8%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDT----------VLNESSLQEQFSS 46
MQ++ + + L + + + S + + SS + E + +
Sbjct: 1 MQFNKVLKGLMLALPVLAIAACSSNKHANNDQSSLNGGAGMENGGNMSSAEQARLQMQEL 60
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRR 105
+ V+FD Y IRP Q+L ++L + +EGHADE G+ +IALG RR
Sbjct: 61 QRNNIVYFDLDKYDIRPDFAQMLDAHAAFLRSNPSYKVTVEGHADERGTPEYNIALGERR 120
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
A AV Y +G+SA ++ V SYGKE P+V GHDE A++KNRRA++
Sbjct: 121 ANAVQMYLQGKGVSADQISVVSYGKEKPAVLGHDEAAWSKNRRAVLV 167
>gi|289662994|ref|ZP_06484575.1| OmpA family outer membrane lipoprotein [Xanthomonas campestris pv.
vasculorum NCPPB702]
Length = 241
Score = 85.2 bits (209), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 1/130 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGH 88
+ +T + + S ++ D + FD +++P L+ + S E + + GH
Sbjct: 102 TANTGIEVQRQGDNISLNLPDGITFDFGKSALKPEFYTALNGVASTLREYNQTMVEVVGH 161
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D +GS + L RA AV Y A+G+ RM GK P + + AKNRR
Sbjct: 162 TDSVGSDAVNQRLSEERAGAVAQYLTAQGVQRERMDTMGAGKRYPIADNNTDAGRAKNRR 221
Query: 149 AIVFLKGCRA 158
+ L RA
Sbjct: 222 VEIRLIPLRA 231
>gi|145636351|ref|ZP_01792020.1| outer membrane protein P6 precursor [Haemophilus influenzae PittHH]
gi|145270516|gb|EDK10450.1| outer membrane protein P6 precursor [Haemophilus influenzae PittHH]
Length = 153
Score = 85.2 bits (209), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/151 (29%), Positives = 74/151 (49%), Gaps = 3/151 (1%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSI 61
++ ++ ++ ++ N D + S+ + ++V+F Y I
Sbjct: 3 KFVKSLLVTGSVAALAACSSSNNDAAGNGAAQTFGGYSVAD--LQQRYNTVYFGFDKYDI 60
Query: 62 RPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA 120
+Q+L + L+EG+ DE G+ +IALG RRA AV Y +G+ A
Sbjct: 61 TGEYVQILDAHAAYLNATPAAKVLVEGNTDERGTPEYNIALGQRRADAVKGYLAGKGVDA 120
Query: 121 SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
++ SYG+E P+V GHDE AY+KNRRA++
Sbjct: 121 GKLGTVSYGEEKPAVLGHDEAAYSKNRRAVL 151
>gi|317121531|ref|YP_004101534.1| OmpA/MotB domain protein [Thermaerobacter marianensis DSM 12885]
gi|315591511|gb|ADU50807.1| OmpA/MotB domain protein [Thermaerobacter marianensis DSM 12885]
Length = 343
Score = 85.2 bits (209), Expect = 2e-15, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 46/130 (35%), Gaps = 5/130 (3%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGH 88
+ + + D VFFD +RP ++L L L + L+EGH
Sbjct: 199 AGLGGRASAQLTDRGVAIIFEDQVFFDLGRADLRPEGRELLRRLAPILARVPGTILVEGH 258
Query: 89 ADELGSR----NSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAY 143
D L S+ L RA V + + R+ YG+ P E
Sbjct: 259 TDNLPIHSDRFPSNWELSTARATTVVRFLAEQAGLDPRRLAAAGYGEWRPRFPNTSEANR 318
Query: 144 AKNRRAIVFL 153
A+NRR + +
Sbjct: 319 ARNRRVEIVV 328
>gi|190573806|ref|YP_001971651.1| putative outer membrane lipoprotein [Stenotrophomonas maltophilia
K279a]
gi|190011728|emb|CAQ45347.1| putative outer membrane lipoprotein [Stenotrophomonas maltophilia
K279a]
Length = 231
Score = 85.2 bits (209), Expect = 2e-15, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 54/125 (43%), Gaps = 1/125 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGH 88
+ +T ++ + ++ D + FD +++P L+ + L + + GH
Sbjct: 102 TANTGIDVQRQGDNIMLNLPDGITFDFGKSTLKPQFYGALNGVAGTLRDYNQTMIEVVGH 161
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D +GS + L RA +V Y + +G+ + R++ GK P + AKNRR
Sbjct: 162 TDSIGSDAVNNRLSKERADSVAQYLIGQGVQSVRIETLGAGKSYPIADNSTDAGRAKNRR 221
Query: 149 AIVFL 153
+ +
Sbjct: 222 VEIRV 226
>gi|319779310|ref|YP_004130223.1| Outer membrane protein A precursor [Taylorella equigenitalis MCE9]
gi|317109334|gb|ADU92080.1| Outer membrane protein A precursor [Taylorella equigenitalis MCE9]
Length = 188
Score = 85.2 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 54/139 (38%), Gaps = 1/139 (0%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+ L + + + FFD S++P VL + ++
Sbjct: 48 TPATALPECGGVTEPSAPAAQPITANKVTFNADTFFDFDKSSLKPEGRTVLDQIAEQVKL 107
Query: 79 HDCDFLIE-GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+ LI GH D +G+ + L RRA V NY + +G+ A ++ + G+ P
Sbjct: 108 LTLESLITVGHTDSIGTNAYNQKLSERRAATVKNYLIDKGVPAEQIIASGRGETQPIADN 167
Query: 138 HDEDAYAKNRRAIVFLKGC 156
+ A+NRR + + G
Sbjct: 168 RTREGRAQNRRVDIEMVGT 186
>gi|188532760|ref|YP_001906557.1| hypothetical protein ETA_06130 [Erwinia tasmaniensis Et1/99]
gi|188027802|emb|CAO95659.1| OmpA family protein [Erwinia tasmaniensis Et1/99]
Length = 413
Score = 85.2 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 51/138 (36%), Gaps = 4/138 (2%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
K ++ ++ ++ F ++S +R +VL + + + L+
Sbjct: 265 KPEIEQGLVAVRDEADRSVVTLKGDGLFTSASTEVRGRYAEVLDRVAAAMNNVSGRILVV 324
Query: 87 GHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
G++D + S+ L L RA +V R+K G+ P + +
Sbjct: 325 GYSDNVPIRSARFASNYELSLARAQSVSGQLRQHLSQPQRVKAEGRGESSPLAPNNSAEN 384
Query: 143 YAKNRRAIVFLKGCRANT 160
A+NRR + L NT
Sbjct: 385 RARNRRVEITLLVSPGNT 402
>gi|325297323|ref|YP_004257240.1| OmpA/MotB domain-containing protein [Bacteroides salanitronis DSM
18170]
gi|324316876|gb|ADY34767.1| OmpA/MotB domain protein [Bacteroides salanitronis DSM 18170]
Length = 398
Score = 85.2 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 43/104 (41%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
D + F+ +I+ L + ++ ++ GH D +G + ++ L +RA AV
Sbjct: 293 DIINFEFDKSTIKKESYPYLDKIVRLMKNTPIHVVVRGHTDNVGDADYNMELSKKRAEAV 352
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+NY + G+ S + YG P + NRR +
Sbjct: 353 YNYLLKAGVEPSHLSYEYYGMTRPISTNDTPEGRLMNRRVEFEI 396
>gi|170723153|ref|YP_001750841.1| peptidoglycan-associated lipoprotein [Pseudomonas putida W619]
gi|169761156|gb|ACA74472.1| peptidoglycan-associated lipoprotein [Pseudomonas putida W619]
Length = 165
Score = 85.2 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 71/130 (54%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+T + SL E+ + + +F+ S ++P ++ L L+ +
Sbjct: 34 AVDPNAGYGANTGAVDGSLSEEAALRAITTFYFEYDSSDLKPEAMRALDVHAKDLKSNGN 93
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
++EG+ DE G+R ++ALG RRA AV Y V +G+S +++++ SYG+E P G+DE
Sbjct: 94 RVVLEGNTDERGTREYNMALGERRAKAVQRYLVLQGVSPAQLELVSYGEERPVATGNDEQ 153
Query: 142 AYAKNRRAIV 151
++A+NRR +
Sbjct: 154 SWAQNRRVEL 163
>gi|307130110|ref|YP_003882126.1| peptidoglycan-associated outer membrane lipoprotein [Dickeya
dadantii 3937]
gi|16116638|emb|CAC82710.1| peptidoglycan-associated lipoprotein [Erwinia chrysanthemi]
gi|306527639|gb|ADM97569.1| peptidoglycan-associated outer membrane lipoprotein [Dickeya
dadantii 3937]
Length = 168
Score = 85.2 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 55/167 (32%), Positives = 85/167 (50%), Gaps = 15/167 (8%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDT----------VLNESSLQEQFSS 46
MQ++ + + L + + + S + + SS + E + +
Sbjct: 1 MQFNKVLKGLMLALPVLAVAACSSNKHANNDQSSLNGGAGMENGGNMSSAEQARLQMQEL 60
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRR 105
+ V+FD Y IRP Q+L ++L + +EGHADE G+ +IALG RR
Sbjct: 61 QRNNIVYFDLDKYDIRPDFAQMLDAHAAFLRSNPSYKVTVEGHADERGTPEYNIALGERR 120
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
A AV Y +G+SA ++ V SYGKE P+V GHDE A++KNRRA++
Sbjct: 121 ANAVQMYLQGKGVSADQISVVSYGKEKPAVLGHDEAAWSKNRRAVLV 167
>gi|77460622|ref|YP_350129.1| OmpA/MotB [Pseudomonas fluorescens Pf0-1]
gi|77384625|gb|ABA76138.1| putative OmpA family lipoprotein [Pseudomonas fluorescens Pf0-1]
Length = 165
Score = 85.2 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 71/130 (54%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+T + SL E+ + + +F+ S ++P ++ L L+ +
Sbjct: 34 AVDPNAGYGANTGAVDGSLSEEAALRAITTFYFEYDSSDLKPEAMRALDVHAKDLKANGA 93
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
++EG+ DE G+R ++ALG RRA AV Y V +G+S +++++ SYG+E P G+DE
Sbjct: 94 RVVLEGNTDERGTREYNMALGERRAKAVQRYLVLQGVSPAQLELVSYGEERPVATGNDEQ 153
Query: 142 AYAKNRRAIV 151
++A+NRR +
Sbjct: 154 SWAQNRRVEL 163
>gi|330808432|ref|YP_004352894.1| Outer membrane porin F [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327376540|gb|AEA67890.1| Outer membrane porin F [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 344
Score = 85.2 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 57/138 (41%), Gaps = 4/138 (2%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD ++P + NL ++++
Sbjct: 203 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQ 262
Query: 79 HDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVY 136
+ +EGH D +G + L RRA AV + + +SR++ YG+ P
Sbjct: 263 YPSTSTTVEGHTDSVGPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSVGYGESRPVAD 322
Query: 137 GHDEDAYAKNRRAIVFLK 154
E A NRR ++
Sbjct: 323 NATEAGRAVNRRVEAQVE 340
>gi|285019182|ref|YP_003376893.1| pal family outer membrane lipoprotein [Xanthomonas albilineans GPE
PC73]
gi|283474400|emb|CBA16901.1| probable pal family outer membrane lipoprotein [Xanthomonas
albilineans]
Length = 172
Score = 85.2 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 38/168 (22%), Positives = 75/168 (44%), Gaps = 16/168 (9%)
Query: 1 MQYSTIFIILSAITMMSISGIDNL---------------DTKISSPDTVLNESSLQEQFS 45
M +T +++S +++ +++G T S + L +
Sbjct: 1 MNKTTRVLLVSLLSVAALAGCSKKVKEHPQTDTTGTTGSTTPSGSSTSGLYGPGDLNTDA 60
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLR 104
V+FD +++P +++ +L ++G+ DE GSR ++ LG R
Sbjct: 61 CLRQRVVYFDLDKDTVKPEFQAIMACHAKYLRDRPSSRITLQGNTDERGSREYNMGLGER 120
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
RA +VF+ A G SA+++ V S+G+E P +E +++NRR +
Sbjct: 121 RANSVFSALQANGGSAAQLTVVSFGEEHPVCTESNESCWSQNRRVEIV 168
>gi|268316295|ref|YP_003290014.1| OmpA/MotB domain-containing protein [Rhodothermus marinus DSM 4252]
gi|262333829|gb|ACY47626.1| OmpA/MotB domain protein [Rhodothermus marinus DSM 4252]
Length = 209
Score = 85.2 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 4/141 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQ---EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+D + + L ++ ++ E + + FD S ++RP + L L L+K
Sbjct: 60 QRMDRQAAEMQQELPDARIERVGEGILVTFDSGILFDFDSATLRPEAREKLRRLAESLKK 119
Query: 79 HDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+ LI GH D G + L RRA A + + +GI SR++ G+ P
Sbjct: 120 YPETEVLIVGHTDSTGPEEYNQRLSERRAEAAAAFLMQQGIRPSRIRTMGKGETEPIASN 179
Query: 138 HDEDAYAKNRRAIVFLKGCRA 158
E+ NRR + + A
Sbjct: 180 ATEEGRQLNRRVEIAIFASEA 200
>gi|260772528|ref|ZP_05881444.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
metschnikovii CIP 69.14]
gi|260611667|gb|EEX36870.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
metschnikovii CIP 69.14]
Length = 179
Score = 85.2 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 48/141 (34%), Positives = 75/141 (53%), Gaps = 2/141 (1%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS-N 71
T S G+D L+E L+EQ + +++F + +I + ++L+ +
Sbjct: 39 TTSGSAGGVDTTVVSPIGEYGQLSEQELKEQ-ALRETQTIYFAFDNATIARSYEEMLAAH 97
Query: 72 LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
+ +EGHADE G+ +IALG RRA AV Y A G+ A+++ + SYG+E
Sbjct: 98 AAYLSKNPSLKVTVEGHADERGTPEYNIALGERRANAVAKYLEALGVQANQISIVSYGEE 157
Query: 132 MPSVYGHDEDAYAKNRRAIVF 152
P V G E+AYAKNRRA++
Sbjct: 158 KPLVLGQTEEAYAKNRRAVLV 178
>gi|114778645|ref|ZP_01453461.1| OmpA/MotB [Mariprofundus ferrooxydans PV-1]
gi|114551110|gb|EAU53671.1| OmpA/MotB [Mariprofundus ferrooxydans PV-1]
Length = 226
Score = 85.2 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 47/114 (41%), Gaps = 1/114 (0%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSI 99
E ++ + FD +S ++PA L+ + L+++ I GH D GS +
Sbjct: 106 NENLKITMNSEISFDYNSAQLKPAFTDTLNKVADILKRYPRSTIRITGHTDNRGSTQYNQ 165
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L +RA AV Y RG+ R+ G+ P E NRR + +
Sbjct: 166 QLSEQRAQAVKWYLSDRGVDPRRIIAEGRGELQPRATNDTEAGRQLNRRVEMLI 219
>gi|154147928|ref|YP_001407122.1| outer membrane fibronectin-binding protein [Campylobacter hominis
ATCC BAA-381]
gi|153803937|gb|ABS50944.1| outer membrane fibronectin-binding protein [Campylobacter hominis
ATCC BAA-381]
Length = 333
Score = 85.2 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 2/131 (1%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH- 79
DN+D +P V+ + E+ + V F S I P L + S +++H
Sbjct: 199 CDNVDKCPGTPAGVVVDEFGCEK-VIRLDLGVNFAFDSAEISPKYYSELEKVSSIMKEHA 257
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ +EG+ D +G + L RRA AV V G+ A ++ G++ P
Sbjct: 258 EYSVRLEGNTDSIGKEAYNQKLSERRANAVSKALVKLGVPAEKITTVGLGEKNPVATNDT 317
Query: 140 EDAYAKNRRAI 150
+ A+NRR
Sbjct: 318 AEGRAQNRRVD 328
>gi|148266090|ref|YP_001232796.1| OmpA/MotB domain-containing protein [Geobacter uraniireducens Rf4]
gi|146399590|gb|ABQ28223.1| OmpA/MotB domain protein [Geobacter uraniireducens Rf4]
Length = 258
Score = 85.2 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 51/130 (39%), Gaps = 5/130 (3%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGH 88
+ ++ + S+ + FFD+ S +++ +L+++ + + +EGH
Sbjct: 119 NDAQNKVSVEITRRGLVVSLKEVGFFDSGSATVQQNSYGLLAHVAESVSNYTNPIRVEGH 178
Query: 89 ADEL----GSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAY 143
D + + S+ L RA + Y + ++ T +G+ P +
Sbjct: 179 TDNVPISSHTFPSNWELSTARATNLVQYLIRYYEFQPDKISATGFGEHRPIADNSTAEGR 238
Query: 144 AKNRRAIVFL 153
KNRR + L
Sbjct: 239 GKNRRVDIVL 248
>gi|84685261|ref|ZP_01013160.1| OmpA family protein [Maritimibacter alkaliphilus HTCC2654]
gi|84666993|gb|EAQ13464.1| OmpA family protein [Rhodobacterales bacterium HTCC2654]
Length = 225
Score = 85.2 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 51/133 (38%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
D + S ++ + + + + F T S + PA L L E +
Sbjct: 89 QAGDLRSSLSNSSIQVINTGSYLKVVMPQGILFPTDSADVSPALYPDLRALAENLREYPN 148
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ GH D G + ++ L RRA AV + G+ A+R++ G P
Sbjct: 149 SSVQVVGHTDNTGQASYNLTLSQRRAQAVLGVIQSNGVGAARLQAVGKGDSEPVATNLTP 208
Query: 141 DAYAKNRRAIVFL 153
+ A+NRR V +
Sbjct: 209 EGRAQNRRVEVLI 221
>gi|270263877|ref|ZP_06192145.1| OmpA/MotB domain-containing protein [Serratia odorifera 4Rx13]
gi|270042070|gb|EFA15166.1| OmpA/MotB domain-containing protein [Serratia odorifera 4Rx13]
Length = 165
Score = 85.2 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 62/157 (39%), Gaps = 5/157 (3%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESS----LQEQFSSSVGDSVFFDTS 57
+ + + + +++++G + ++ L +S + + D V F +
Sbjct: 7 KNRFSLLAMMFVALLALAGCQSKPQGLTPEQVALLQSQGFKLTDNGWEFGLSDKVLFGNN 66
Query: 58 SYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
+ P + + +G + F ++GH D G + + L LRRA AV + +
Sbjct: 67 IGKLNPESTETVQKMGRALMSVGITKFRLDGHTDNYGEDSYNDQLSLRRANAVADLLASV 126
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
GI + ++ GK P A+NRR + +
Sbjct: 127 GIPRANIETRGMGKRDPVADNRTSSGRAENRRVAIVV 163
>gi|237745869|ref|ZP_04576349.1| OmpA/MotB domain-containing protein [Oxalobacter formigenes HOxBLS]
gi|229377220|gb|EEO27311.1| OmpA/MotB domain-containing protein [Oxalobacter formigenes HOxBLS]
Length = 218
Score = 85.2 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 36/134 (26%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FL 84
+ V + Q S+ V F T+S +I P +L +L + L+ +
Sbjct: 85 QTATQGTGVEVVQTSDNQIKVSIPSDVSFATNSATISPQFKTILRDLATTLKNNPSTSIT 144
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+ G+ D GS + L RA +V NY V++G++A+R V G P A
Sbjct: 145 VIGYTDNTGSDAINQPLSRERAMSVRNYLVSQGVAANRFTVEGRGSSDPIASNLTAAGRA 204
Query: 145 KNRRAIVFLKGCRA 158
+NRR +++ G RA
Sbjct: 205 ENRRVEIYV-GERA 217
>gi|108759406|ref|YP_634375.1| OmpA domain-containing protein [Myxococcus xanthus DK 1622]
gi|108463286|gb|ABF88471.1| OmpA domain protein [Myxococcus xanthus DK 1622]
Length = 538
Score = 85.2 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 44/118 (37%), Gaps = 1/118 (0%)
Query: 36 NESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGS 94
+ + V F ++ ++ + L + +L+ + IEGH D G
Sbjct: 415 QAPTTEAPTRLPTEHHVQFPVGQSTLSDSERRNLDAIADYLKANPGVSLRIEGHTDNTGP 474
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ L RA AV Y + +GI +SR+ YG P + + NRR
Sbjct: 475 EELNRTLSQDRADAVRQYLIQQGIESSRLTAKGYGPAQPIASNDTPEGRSANRRVEFV 532
>gi|302339235|ref|YP_003804441.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293]
gi|301636420|gb|ADK81847.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293]
Length = 340
Score = 85.2 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 53/116 (45%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSS 98
SL + V ++ F S + P + LS + S L+K + I GH ++G R S
Sbjct: 225 SLHNEVVVLVTSTLSFKPDSAELTPESGEELSRIASILKKKRIEVEIAGHTADVGDRASQ 284
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L L+RA +V V+ G+ R+ V YG P ++ A+NRR ++
Sbjct: 285 YTLSLQRAESVKRTLVSLGVKERRLSVKGYGGSRPIASNDSQEGRAQNRRVEFLVR 340
>gi|56697940|ref|YP_168311.1| peptidoglycan-associated lipoprotein [Ruegeria pomeroyi DSS-3]
gi|56679677|gb|AAV96343.1| peptidoglycan-associated lipoprotein [Ruegeria pomeroyi DSS-3]
Length = 181
Score = 85.2 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 50/162 (30%), Positives = 75/162 (46%), Gaps = 9/162 (5%)
Query: 1 MQYSTIFIILSAITMMSIS--------GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV 52
M + + A+ ++ G + ++ + + FS ++GD V
Sbjct: 14 MNVLSKLAAMGALVALAACTNPEDLGDGNSVDLNGAGAGSGLVGDPTSPAYFSQAIGDRV 73
Query: 53 FFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
F ++ P L WL D IEGHADE G+R ++ALG RRA A
Sbjct: 74 LFAVDQSTLGPEAQATLGAQAQWLLTNTDYTATIEGHADEQGTREYNLALGARRANAARE 133
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ ++RG++ SR+K SYGKE P DE Y+KNRRA+ L
Sbjct: 134 FLISRGVAGSRLKTVSYGKERPIEICSDEACYSKNRRAVTVL 175
>gi|77458004|ref|YP_347509.1| OmpF [Pseudomonas fluorescens Pf0-1]
gi|77382007|gb|ABA73520.1| outer membrane fibronectin-binding protein [Pseudomonas fluorescens
Pf0-1]
Length = 344
Score = 85.2 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 57/138 (41%), Gaps = 4/138 (2%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD ++P + NL ++++
Sbjct: 203 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQ 262
Query: 79 HDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVY 136
+ +EGH D +G + L RRA AV + + +SR++ YG+ P
Sbjct: 263 YPSTTTTVEGHTDSVGPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSIGYGESRPVAD 322
Query: 137 GHDEDAYAKNRRAIVFLK 154
E A NRR ++
Sbjct: 323 NKTEAGRAVNRRVEAQVE 340
>gi|255533611|ref|YP_003093983.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366]
gi|255346595|gb|ACU05921.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366]
Length = 440
Score = 85.2 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 59/143 (41%), Gaps = 3/143 (2%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS 70
A ++ SG K+ +P + + + + ++ FD +IR L+
Sbjct: 300 PAGVVVDGSGC---PLKVPAPVEKIIITEADRKVVADAIKNLEFDLGKATIRQKSYATLN 356
Query: 71 NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
+ L + + + GH D GS ++ L RA +V Y V++G +ASR++ T YG
Sbjct: 357 RVAELLIQKNFSLKLAGHTDNTGSAALNMRLSKDRAESVKAYLVSQGANASRIEATGYGM 416
Query: 131 EMPSVYGHDEDAYAKNRRAIVFL 153
P +NRR L
Sbjct: 417 NQPIASNKTAAGRQQNRRVEFTL 439
>gi|4530365|gb|AAD22005.1| major outer membrane protein [Pseudomonas fluorescens]
Length = 343
Score = 85.2 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 57/138 (41%), Gaps = 4/138 (2%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD ++P + NL ++++
Sbjct: 202 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQ 261
Query: 79 HDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVY 136
+ +EGH D +G + L RRA AV + + +SR++ YG+ P
Sbjct: 262 YPSTSTTVEGHTDSVGPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSVGYGESRPVAD 321
Query: 137 GHDEDAYAKNRRAIVFLK 154
E A NRR ++
Sbjct: 322 NATEAGRAVNRRVEAQVE 339
>gi|114764072|ref|ZP_01443311.1| OmpA domain protein [Pelagibaca bermudensis HTCC2601]
gi|114543430|gb|EAU46445.1| OmpA domain protein [Roseovarius sp. HTCC2601]
Length = 221
Score = 85.2 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 50/115 (43%), Gaps = 1/115 (0%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSS 98
++ ++ + F S ++R + +GS L + + + GH D G +
Sbjct: 103 TGDRLIVTMPQDILFGFDSDTLRNDLQADIRTVGSSLLQYPNTSVQVVGHTDSDGDAGYN 162
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RRA +V N V+ G+ +SR+ V G+ P + A+NRR + +
Sbjct: 163 QGLSQRRAQSVANVLVSSGVPSSRISVIGRGEAAPVASNLTPEGKAQNRRVEIVI 217
>gi|93006911|ref|YP_581348.1| OmpA/MotB [Psychrobacter cryohalolentis K5]
gi|92394589|gb|ABE75864.1| OmpA/MotB [Psychrobacter cryohalolentis K5]
Length = 217
Score = 85.2 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 1/129 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG-SWLEKHDCDFL 84
+ + V + + + S+ F ++ + L L + E +
Sbjct: 82 EQQMAGTGVTVKPNANGNIDLVMPGSITFSFDDATLNNSFKPTLDKLAATMNEYNQNTIT 141
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
I GH D G+ ++ L RAYAV NY ARG++++R+ V +YG+ P + E
Sbjct: 142 IAGHTDSKGTDAYNMKLSRDRAYAVANYLSARGVASNRINVVAYGESRPVADNNSEFGRQ 201
Query: 145 KNRRAIVFL 153
+NRR + +
Sbjct: 202 QNRRVELTV 210
>gi|307728928|ref|YP_003906152.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003]
gi|307583463|gb|ADN56861.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003]
Length = 217
Score = 85.2 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 1/132 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF-L 84
+ + ++ SV FDT+SY+I+P+ VL L L+++
Sbjct: 80 SGATKGTGTQITEQPDGSLKLNIPSSVTFDTNSYAIKPSFAPVLDQLTQTLQQNPEVIAQ 139
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+ GH D G + L + RA +V ++ RG++A R+ G+ P + E A
Sbjct: 140 VVGHTDSTGQPAYNQTLSVNRAQSVVSFLEQRGVAAQRLSAQGMGQNQPIADNNTEAGRA 199
Query: 145 KNRRAIVFLKGC 156
NRR ++L+
Sbjct: 200 ANRRVEIYLRAT 211
>gi|291326447|ref|ZP_06124556.2| peptidoglycan-associated lipoprotein [Providencia rettgeri DSM
1131]
gi|291314244|gb|EFE54697.1| peptidoglycan-associated lipoprotein [Providencia rettgeri DSM
1131]
Length = 180
Score = 85.2 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 54/163 (33%), Positives = 87/163 (53%), Gaps = 12/163 (7%)
Query: 1 MQYSTIF----IILSAITMMSISG-----IDNLDTKISSPDTVLNESSLQEQFSSSV--G 49
MQ + + I L + + + S D +DT + +T L+ L Q +
Sbjct: 16 MQLNKVLKGLMIALPIMAVAACSSNKNNDQDGVDTSTNQTNTGLSAEELARQQMEQLQQN 75
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYA 108
++V+F Y++ P ++L ++L + ++EGHADE G+ +IALG RRA A
Sbjct: 76 NTVYFGFDKYNVSPEYAEMLDAHAAFLRSNPSVRVVVEGHADERGTPEYNIALGERRANA 135
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
V Y ++G+S ++ + SYGKE P+V GH E YAKNRRA++
Sbjct: 136 VKMYLQSKGVSGDQVSLVSYGKEKPAVLGHTEADYAKNRRAVI 178
>gi|170717596|ref|YP_001783489.1| peptidoglycan-associated lipoprotein [Haemophilus somnus 2336]
gi|168825725|gb|ACA31096.1| Peptidoglycan-associated lipoprotein [Haemophilus somnus 2336]
Length = 151
Score = 85.2 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 48/154 (31%), Positives = 87/154 (56%), Gaps = 8/154 (5%)
Query: 1 MQ-YSTIFIILSAIT-MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSS 58
M+ ++ + ++ ++ + + S DN + + + LQ+++ ++V+F+ S
Sbjct: 1 MKNFAKLLVVAGSVAVLAACSSSDNASKTNAQMFGGYSVTDLQQRY-----NTVYFEFDS 55
Query: 59 YSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG 117
Y ++ Q+L + L+EGHADE G+ ++ALGLRRA AV N+ + +G
Sbjct: 56 YDVQGEYAQILDAHSAYLKSTPASKVLVEGHADERGTPEYNMALGLRRADAVKNFLLNKG 115
Query: 118 ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ AS++ SYG+E P+ GH+E AY+KNRRA+
Sbjct: 116 VQASQLSTLSYGEEKPAELGHNEAAYSKNRRAVF 149
>gi|329888410|ref|ZP_08267008.1| peptidoglycan-associated lipoprotein [Brevundimonas diminuta ATCC
11568]
gi|328846966|gb|EGF96528.1| peptidoglycan-associated lipoprotein [Brevundimonas diminuta ATCC
11568]
Length = 184
Score = 85.2 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 52/179 (29%), Positives = 81/179 (45%), Gaps = 27/179 (15%)
Query: 1 MQYSTIF-IILSAITMMSISGIDNLDTKISSP-----------------------DTVLN 36
M ST+ + + M S++ + + P +
Sbjct: 1 MNTSTLIRLAAVGVAMASLAACTKPKVEPAVPVETPPPAVGPQYPTAPTGPVSGGNVGAP 60
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
++ F +VGD V+FD SYS+R L +W IEG+ADE G+R
Sbjct: 61 APGSEQDFVVNVGDRVYFDLDSYSVRAEAQPRLDAQAAWLARYPQVTVRIEGNADERGTR 120
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR--RAIVF 152
++ALG RRA AV +Y ++RG+ A+R+ S+GKE P G +E A+A+NR R +
Sbjct: 121 EYNLALGARRAEAVRSYLISRGVPAARIDTISFGKERPIAEGSNESAWAQNRNARTAIV 179
>gi|255527289|ref|ZP_05394169.1| OmpA/MotB domain protein [Clostridium carboxidivorans P7]
gi|255509027|gb|EET85387.1| OmpA/MotB domain protein [Clostridium carboxidivorans P7]
Length = 182
Score = 85.2 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 55/137 (40%), Gaps = 4/137 (2%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
K + + + S+ D++FF+T + A L +G L + D IE
Sbjct: 6 KKNGMQNSVTTEVDERGLVVSLRDTLFFETGKAEVIAASQGKLVEIGKILNQLDNTMRIE 65
Query: 87 GHADELGSRNSS----IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
GH D + N L RA V +A G+ ++ +YG+ P + ED
Sbjct: 66 GHTDNVPIHNEQFSDNWQLSSARALNVTELLIANGVPPKKLSSVAYGEYRPVLDNSTEDG 125
Query: 143 YAKNRRAIVFLKGCRAN 159
A+NRR + + + N
Sbjct: 126 RARNRRVDIIVVSNKYN 142
>gi|332978389|gb|EGK15109.1| peptidoglycan-associated lipoprotein [Psychrobacter sp. 1501(2011)]
Length = 170
Score = 85.2 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 13/163 (7%)
Query: 2 QYSTIFIILSAITMMSISGIDNLD------------TKISSPDTVLNESSLQEQFSSSVG 49
+ S I ++ +A+ + ++N S+ + + +V
Sbjct: 6 KISAITLVSAALLSTVGCATKPKNSEFVVAPMAVPGNAAYQTGPLVNNSAEVQAAAQNVR 65
Query: 50 DSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
V F S I +L+ + D L+ GH DE GSR + ALG RRA A
Sbjct: 66 SIVRFPFDSSEIDAEAASILNEQVAFLASHPDARVLVAGHTDERGSREYNHALGERRAQA 125
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
V NY ++G++ +R++ SYG++ P G DE ++A+NRRA +
Sbjct: 126 VRNYLASQGVTDARVETISYGEDRPVAAGTDEASHAQNRRAEL 168
>gi|77164341|ref|YP_342866.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707]
gi|254434085|ref|ZP_05047593.1| Rickettsia 17 kDa surface antigen family [Nitrosococcus oceani
AFC27]
gi|76882655|gb|ABA57336.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707]
gi|207090418|gb|EDZ67689.1| Rickettsia 17 kDa surface antigen family [Nitrosococcus oceani
AFC27]
Length = 248
Score = 85.2 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADELGSRNSSI 99
E + + FD S ++PA + L + L+K++ + + GH D GS ++
Sbjct: 108 DESLKLDIPSEISFDHDSDVLKPAFLPTLDKIAEVLKKYNKTVVHVIGHTDSTGSEKYNL 167
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L LRRA V YF +G+ + R+ + G+ P NRR + LK
Sbjct: 168 DLSLRRAGNVAVYFERKGVPSQRLSIYGRGESEPRASNATAAGRQLNRRVEIILK 222
>gi|78221681|ref|YP_383428.1| OmpA/MotB [Geobacter metallireducens GS-15]
gi|78192936|gb|ABB30703.1| OmpA/MotB [Geobacter metallireducens GS-15]
Length = 267
Score = 85.2 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 53/138 (38%), Gaps = 8/138 (5%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGH 88
++ Q S+ ++ FFD+ S +R + +L+ + L + +EGH
Sbjct: 122 QGAQAKVSVGITQRGLVVSLKEAGFFDSGSAIVRESAYPLLAKVAESLAGYSNAVRVEGH 181
Query: 89 ADELGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAY 143
D + S+ L RA + ++ S + +G+ P +
Sbjct: 182 TDTMPISSPLFPSNWELSTARATNIVHFLTKSYDFQPSAISAAGFGEYRPIADNATAEGR 241
Query: 144 AKNRRAIVFL---KGCRA 158
+KNRR + L +G +A
Sbjct: 242 SKNRRVDIVLLSGEGEKA 259
>gi|254524462|ref|ZP_05136517.1| outer membrane protein [Stenotrophomonas sp. SKA14]
gi|219722053|gb|EED40578.1| outer membrane protein [Stenotrophomonas sp. SKA14]
Length = 231
Score = 85.2 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 54/125 (43%), Gaps = 1/125 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGH 88
+ +T ++ + ++ D + FD +++P L+ + L + + GH
Sbjct: 102 TANTGIDVQRQGDNIMLNLPDGITFDFGKATLKPQFYGSLNGVAGTLRDYNQTMIEVVGH 161
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D +GS + L RA +V Y + +G+ + R++ GK P + AKNRR
Sbjct: 162 TDSIGSDAVNNRLSKERADSVAQYLIGQGVQSVRIETLGAGKSYPIADNSTDAGRAKNRR 221
Query: 149 AIVFL 153
+ +
Sbjct: 222 VEIRV 226
>gi|186477205|ref|YP_001858675.1| peptidoglycan-associated lipoprotein [Burkholderia phymatum STM815]
gi|184193664|gb|ACC71629.1| peptidoglycan-associated lipoprotein [Burkholderia phymatum STM815]
Length = 169
Score = 85.2 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 13/165 (7%)
Query: 1 MQYSTIFIILSAITMMSIS--------GIDNLDTKISSPDT----VLNESSLQEQFSSSV 48
M I + ++ + ++ + P+ +N L + S
Sbjct: 2 MSKLRIALAVAMVGTLAACHSGVKLDENAGKGGATGAQPNPNDVATVNVDPLNDPNSPLA 61
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAY 107
S++FD SYS++ +L +L+ H LI+G+ DE G+ ++ALG +RA
Sbjct: 62 KRSIYFDFDSYSVKDDYQPLLQQHAQYLKSHPQRHVLIQGNTDERGTSEYNLALGQKRAE 121
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
AV G+ S M+ S GKE P GHDE ++A+NRRA +
Sbjct: 122 AVRRSLSLLGVPDSEMEAVSLGKEKPQATGHDEASWAQNRRADLV 166
>gi|119357472|ref|YP_912116.1| OmpA/MotB domain-containing protein [Chlorobium phaeobacteroides
DSM 266]
gi|119354821|gb|ABL65692.1| OmpA/MotB domain protein [Chlorobium phaeobacteroides DSM 266]
Length = 229
Score = 85.2 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 52/133 (39%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
D +I + E + F+T S +I + L + D
Sbjct: 80 DKQAAEIDRNVEGAEVERIGEGIRVVFDSGILFNTGSSAITSTSRYNIEKLAGILAKYDD 139
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ +IEGH D +GS + + L RA +V N A G+S+SR+ YG+ P E
Sbjct: 140 TNLIIEGHTDSVGSDSMNQTLSENRAQSVANLLKAYGVSSSRLSAIGYGESRPIASNETE 199
Query: 141 DAYAKNRRAIVFL 153
NRR V +
Sbjct: 200 SGRRLNRRVEVLI 212
>gi|167035287|ref|YP_001670518.1| OmpA/MotB domain-containing protein [Pseudomonas putida GB-1]
gi|166861775|gb|ABZ00183.1| OmpA/MotB domain protein [Pseudomonas putida GB-1]
Length = 239
Score = 84.9 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 1/125 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGH 88
+ E +V F S + PA Q L + + GH
Sbjct: 114 AAPPATVAEPSPEVIILDDNGAVMFAFDSADLTPAAQQRLQGLVAKLDSPTVAKVRVIGH 173
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D +GS + + AL RRA +V Y + +G+ A ++ G+ P E+ A+NRR
Sbjct: 174 TDNVGSDSYNQALSERRASSVAEYLIGQGLEAGKVTSQGRGESEPVTDNETEEGRARNRR 233
Query: 149 AIVFL 153
+ L
Sbjct: 234 VELHL 238
>gi|4580975|gb|AAD24562.1|AF117970_1 OprF [Pseudomonas viridiflava]
Length = 344
Score = 84.9 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 4/138 (2%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD ++P+ + NL ++++
Sbjct: 203 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPSSYGDIKNLADFMQQ 262
Query: 79 H-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVY 136
+ +EGH D +G + L RRA AV V + ASR+ YG+ P
Sbjct: 263 YPQTSTTVEGHTDSVGPDAYNQKLSERRANAVKQVLVNQYGVGASRVNSVGYGESRPVAD 322
Query: 137 GHDEDAYAKNRRAIVFLK 154
E A NRR ++
Sbjct: 323 NATESGRAVNRRVEAEVE 340
>gi|149195189|ref|ZP_01872279.1| OmpA domain protein [Caminibacter mediatlanticus TB-2]
gi|149134622|gb|EDM23108.1| OmpA domain protein [Caminibacter mediatlanticus TB-2]
Length = 383
Score = 84.9 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHA 89
P+T Q + + + FDT+S I+P + + +L+ H I+G+
Sbjct: 258 PNTPKGFKVDQNGCAITYNFEINFDTNSAKIKPEYMPKIEKFAEFLKNHPDVKAEIQGYT 317
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GS ++ L +RA AV+ + G++ ++ YG+ P + AKNRR
Sbjct: 318 DNRGSATYNMILSEKRAKAVYEALLKLGVNKDQITFVGYGEANPIASNDTPEGRAKNRRV 377
Query: 150 IVFL 153
+ +
Sbjct: 378 VAKI 381
>gi|104783066|ref|YP_609564.1| peptidoglycan-associated lipoprotein [Pseudomonas entomophila L48]
gi|95112053|emb|CAK16780.1| peptidoglycan-associated lipoprotein precursor [Pseudomonas
entomophila L48]
Length = 165
Score = 84.9 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 71/130 (54%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+T + SL E+ + + +F+ S ++P ++ L L+ +
Sbjct: 34 AVDPNAGYGANTGAVDGSLSEEAALRAITTFYFEYDSSDLKPEAMRSLDVHAKDLKSNGN 93
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
++EG+ DE G+R ++ALG RRA AV Y V +G+S +++++ SYG+E P G+DE
Sbjct: 94 RVVLEGNTDERGTREYNMALGERRAKAVQRYLVLQGVSPAQLELVSYGEERPVATGNDEQ 153
Query: 142 AYAKNRRAIV 151
++A+NRR +
Sbjct: 154 SWAQNRRVEL 163
>gi|162450713|ref|YP_001613080.1| ompA family outer membrane protein [Sorangium cellulosum 'So ce
56']
gi|161161295|emb|CAN92600.1| omp A family outer membrane protein [Sorangium cellulosum 'So ce
56']
Length = 578
Score = 84.9 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/146 (22%), Positives = 53/146 (36%), Gaps = 13/146 (8%)
Query: 22 DNLDTKISSPDTVLNESSLQEQ-----------FSSSVGDSVFFDTSSYSIRPADIQVLS 70
D D P V+ E + + V F+ S I P +L
Sbjct: 426 DAEDKCPKEPGQVVVEDPEKNGCPFYIRRITGSAEIEIMKQVEFEFDSSRILPQSYPILD 485
Query: 71 NLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
+ L+ + IEGH D G+ + + L RA AV Y + +G+ + R+ Y
Sbjct: 486 EVVRLLKANPEIKLLSIEGHTDNQGTIDYNDRLAHNRAIAVRVYLINKGVQSERLTSIGY 545
Query: 129 GKEMPSVYGHDEDAYAKNRRAIVFLK 154
G P + + +NRR +K
Sbjct: 546 GSRRPLLSNDTPEGRQRNRRVEFHIK 571
>gi|152986859|ref|YP_001349884.1| peptidoglycan associated lipoprotein OprL precursor [Pseudomonas
aeruginosa PA7]
gi|150962017|gb|ABR84042.1| peptidoglycan associated lipoprotein OprL [Pseudomonas aeruginosa
PA7]
Length = 169
Score = 84.9 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 71/138 (51%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+ ++ + SL ++ + + +F+ S ++P ++ L
Sbjct: 30 ASGEGANGGVDPNAGYGANSGAVDGSLSDEAALRAITTFYFEYDSSDLKPEAMRALDVHA 89
Query: 74 SWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
L+ ++EGH DE G+R ++ALG RRA AV Y V +G+S +++++ SYGKE P
Sbjct: 90 KDLKGSGQRVVLEGHTDERGTREYNMALGERRAKAVQRYLVLQGVSPAQLELVSYGKERP 149
Query: 134 SVYGHDEDAYAKNRRAIV 151
GHDE ++A+NRR +
Sbjct: 150 VATGHDEQSWAQNRRVEL 167
>gi|94970975|ref|YP_593023.1| OmpA/MotB family outer membrane protein [Candidatus Koribacter
versatilis Ellin345]
gi|94553025|gb|ABF42949.1| outer membrane protein, OmpA/MotB family [Candidatus Koribacter
versatilis Ellin345]
Length = 407
Score = 84.9 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 1/101 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
V FD + +++P L + + ++GH D +G+ + L RA +V
Sbjct: 298 VLFDFNKATLQPESDGPLGQVGALLTANSSLNVEVQGHTDNVGTDAYNQTLSEARAKSVM 357
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ G++ RM YGK MP +D KNRR +
Sbjct: 358 TWLTQHGVAPGRMTAKGYGKTMPVADNKTDDGRMKNRRVEI 398
>gi|330810957|ref|YP_004355419.1| lipoprotein [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|327379065|gb|AEA70415.1| putative lipoprotein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 269
Score = 84.9 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 58/140 (41%), Gaps = 2/140 (1%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ + + + ++GD V FDT ++ + +V+ + +L+ +
Sbjct: 125 SVQQQGKWLEEQIMAMATTQTDRGLVMTLGD-VLFDTGEAELKNSANRVVLKIVQFLQLN 183
Query: 80 DCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ IEG+ D G + ++ L RA AV + V G+ R++V YG + P
Sbjct: 184 PKRVVRIEGYTDSTGGKQENLKLSRDRAQAVADVLVDLGVDEKRIQVEGYGDQYPVDVNA 243
Query: 139 DEDAYAKNRRAIVFLKGCRA 158
E A+NRR + +
Sbjct: 244 SERGRAQNRRVEIVFSDEKG 263
>gi|237747593|ref|ZP_04578073.1| outer membrane protein A [Oxalobacter formigenes OXCC13]
gi|229378955|gb|EEO29046.1| outer membrane protein A [Oxalobacter formigenes OXCC13]
Length = 207
Score = 84.9 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 2/143 (1%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
++ G D T+ ++ V + + D+ FFD ++P L L L
Sbjct: 63 AVPGCDGPLTQPAAAAPVAVAPVPTAEKVTYAADA-FFDFDKSIVKPEGKAKLDELIKAL 121
Query: 77 EKHDCDFLI-EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
D + ++ GH D +G+ + L RRA AV Y V++G+ A+++ GK+ P
Sbjct: 122 SGMDTEVIVAVGHTDWIGTDKYNQKLSERRANAVKAYLVSKGVPANKIFTEGKGKKQPIA 181
Query: 136 YGHDEDAYAKNRRAIVFLKGCRA 158
+ AKNRR V + R
Sbjct: 182 SNKTREGRAKNRRVEVEVVANRG 204
>gi|115379068|ref|ZP_01466194.1| hypothetical protein STIAU_2752 [Stigmatella aurantiaca DW4/3-1]
gi|115363928|gb|EAU63037.1| hypothetical protein STIAU_2752 [Stigmatella aurantiaca DW4/3-1]
Length = 831
Score = 84.9 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 44/127 (34%), Gaps = 3/127 (2%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS--WLEKHDCDFLIEGHAD 90
+ E + V+F T+ I +L + + +EGH D
Sbjct: 702 DQGEVNVRVEGKKILILQKVYFATNKDIILDRSFSLLKQVAAVLRANPQLTKIRVEGHTD 761
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
GS ++ L RRA +V Y + + A R++ YG+ P NRR
Sbjct: 762 SQGSDAFNLDLSDRRAKSVRTYLIEKEGIAADRLEAVGYGETKPVDTNDTVAGRENNRRV 821
Query: 150 IVFLKGC 156
+ G
Sbjct: 822 EFIIVGA 828
>gi|66045337|ref|YP_235178.1| thrombospondin type 3 repeat-containing OmpA/MotB protein
[Pseudomonas syringae pv. syringae B728a]
gi|63256044|gb|AAY37140.1| Thrombospondin type 3 repeat:OmpA/MotB:OmpF [Pseudomonas syringae
pv. syringae B728a]
gi|330973748|gb|EGH73814.1| thrombospondin type 3 repeat-containing OmpA/MotB protein
[Pseudomonas syringae pv. aceris str. M302273PT]
Length = 344
Score = 84.9 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 4/138 (2%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD ++P+ + NL ++++
Sbjct: 203 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPSSYGDIKNLADFMQQ 262
Query: 79 H-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVY 136
+ +EGH D +G + L RRA AV V + ASR+ YG+ P
Sbjct: 263 YPQTTTTVEGHTDSVGPDAYNQKLSERRANAVKQVLVNQYGVGASRVNSVGYGETKPVAD 322
Query: 137 GHDEDAYAKNRRAIVFLK 154
E A NRR ++
Sbjct: 323 NATEAGRAVNRRVEAEVE 340
>gi|222054197|ref|YP_002536559.1| peptidoglycan-associated lipoprotein [Geobacter sp. FRC-32]
gi|221563486|gb|ACM19458.1| peptidoglycan-associated lipoprotein [Geobacter sp. FRC-32]
Length = 194
Score = 84.9 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 47/141 (33%), Positives = 70/141 (49%), Gaps = 6/141 (4%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSV-----GDSVFFDTSSYSIRPADIQVLSNLG 73
+ + + + S ++ + +V + V FD S+ + PA LS
Sbjct: 52 APSETVKEQPIQEAPTTTAESTVKEQAPTVIAATELEKVLFDFDSFVLSPAARDTLSKNA 111
Query: 74 SW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
W + IEGH DE GS ++ALG +RA + NY V GI AS++ V S+GKE
Sbjct: 112 QWLEKNKQVKVQIEGHCDERGSDEYNLALGEKRAKSAVNYLVTLGIPASQLSVISFGKEK 171
Query: 133 PSVYGHDEDAYAKNRRAIVFL 153
P+ GHDE A+A+NRRA +
Sbjct: 172 PADPGHDEAAWAQNRRAEFVI 192
>gi|49474668|ref|YP_032710.1| peptidoglycan-associated lipoprotein [Bartonella quintana str.
Toulouse]
gi|49240172|emb|CAF26636.1| Peptidoglycan-associated lipoprotein [Bartonella quintana str.
Toulouse]
Length = 172
Score = 84.9 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 53/155 (34%), Positives = 75/155 (48%), Gaps = 9/155 (5%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTVLNESS--------LQEQFSSSVGDSVFFDTSSY 59
+ L +S+ G + +S+ + F+ +VGD VFF S
Sbjct: 12 LALVLFFSLSLVGCGRKYVGADGMNGSSLKSAGFNQALLASGQDFTVNVGDRVFFSLDSS 71
Query: 60 SIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI 118
SI P VL WL +IEGHADE G+R ++ALG RRA AV NY ++ G+
Sbjct: 72 SIEPDAEAVLIRQAQWLLRHPSYSIVIEGHADERGTREYNLALGQRRAVAVRNYLISLGV 131
Query: 119 SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ RM+ SYGKE P D + +NRRA+ +
Sbjct: 132 SSQRMQTISYGKERPVAVCDDISCWNQNRRAVTKI 166
>gi|322833830|ref|YP_004213857.1| peptidoglycan-associated lipoprotein [Rahnella sp. Y9602]
gi|321169031|gb|ADW74730.1| peptidoglycan-associated lipoprotein [Rahnella sp. Y9602]
Length = 170
Score = 84.9 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 52/169 (30%), Positives = 80/169 (47%), Gaps = 17/169 (10%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDT------------KISSPDTVLNESSLQEQF 44
MQ + + + L + + + S N D + + E + +
Sbjct: 1 MQLNKVLKGLMLALPVLAVAACSSHKNADNDQSNGMGLNSGAGTENANMSSEEQARLQMQ 60
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGL 103
+ V+F Y + Q+L ++L + +EGHADE G+ +IALG
Sbjct: 61 ELQKNNIVYFGLDKYDVSSEFAQMLDAHAAFLRSNPSYKVTVEGHADERGTPEYNIALGE 120
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
RRA AV Y +G+SA ++ + SYGKE P+V GHDE AYAKNRRA++
Sbjct: 121 RRATAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYAKNRRAVLV 169
>gi|91201036|emb|CAJ74094.1| hypothetical protein kuste3333 [Candidatus Kuenenia
stuttgartiensis]
Length = 395
Score = 84.9 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 37/132 (28%), Positives = 58/132 (43%), Gaps = 6/132 (4%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
D D +P+ + + V + F+ + I+ L+N+ + D
Sbjct: 266 DEDDECPDTPEGA-----IVDSRGCWVVKGIAFEYKKWDIKEEFESNLTNIVDVLEKNPD 320
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
IEGH D +GS +I L +RA AV +Y V +GI SR+ T +G + P E
Sbjct: 321 LQIRIEGHTDNIGSMKYNIDLSQKRALAVKDYLVEKGIHESRISTTGFGFKHPIAPNVTE 380
Query: 141 DAYAKNRRAIVF 152
+ A NRRA +
Sbjct: 381 EGRALNRRAEIV 392
>gi|218662996|ref|ZP_03518926.1| OmpA family peptidoglycan-associated lipoprotein precursor
[Rhizobium etli IE4771]
Length = 169
Score = 84.9 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 7/156 (4%)
Query: 8 IILSAITMMSISGIDNLDT------KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSI 61
++++ + ++++ + + + F+ +VGD +FFDT S SI
Sbjct: 12 VMIALVAGLALASCAKKPPNSAGDLGLGAGAGGAATPGSAQDFTVNVGDRIFFDTDSSSI 71
Query: 62 RPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA 120
R Q L W + +EGHADE G+R ++ALG RRA A +Y +RG+ A
Sbjct: 72 RADASQTLDRQAQWLGRYPNYQITVEGHADERGTREYNLALGARRAAAAKDYLASRGVPA 131
Query: 121 SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
RMK SYGKE P D +++NRRA+ L G
Sbjct: 132 QRMKTISYGKERPVAVCDDISCWSQNRRAVTVLGGA 167
>gi|312962530|ref|ZP_07777021.1| OmpA/MotB [Pseudomonas fluorescens WH6]
gi|311283457|gb|EFQ62047.1| OmpA/MotB [Pseudomonas fluorescens WH6]
Length = 271
Score = 84.9 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 58/140 (41%), Gaps = 2/140 (1%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ + L + ++GD V FDT ++ + + + + +L+ +
Sbjct: 127 SVQQQGKWLEEQIASLTTTQTDRGLVMTLGD-VLFDTGEAELKNSANRTVLKIVQFLQLN 185
Query: 80 DCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ IEG+AD G + ++ L RA +V + V GI R++V YG + P
Sbjct: 186 PKRVVRIEGYADNTGGQQENLKLSRDRAQSVADVLVDLGIDEKRIQVEGYGDQYPVEANA 245
Query: 139 DEDAYAKNRRAIVFLKGCRA 158
E A+NRR + +
Sbjct: 246 SERGRAQNRRVEIVFSDEKG 265
>gi|225024888|ref|ZP_03714080.1| hypothetical protein EIKCOROL_01776 [Eikenella corrodens ATCC
23834]
gi|224942346|gb|EEG23555.1| hypothetical protein EIKCOROL_01776 [Eikenella corrodens ATCC
23834]
Length = 219
Score = 84.9 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHA 89
+T + +Q ++ V F T+S S+ P + L+ + + + + + GH
Sbjct: 87 ANTPVEVQRQGDQIKLTMPSGVTFATNSSSLSPDAVNSLNTVANVLTQYPETTITVAGHT 146
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G+ + L RA +V Y RG++ASR+ YG P E A+NRR
Sbjct: 147 DNTGNDRINNPLSKNRARSVAGYLTGRGVAASRISTVGYGSRSPVADNSTESGRAQNRRV 206
Query: 150 IVFL 153
+ +
Sbjct: 207 EILI 210
>gi|289675211|ref|ZP_06496101.1| OmpA/MotB [Pseudomonas syringae pv. syringae FF5]
gi|330896025|gb|EGH28248.1| OmpA/MotB [Pseudomonas syringae pv. japonica str. M301072PT]
gi|330936859|gb|EGH41006.1| OmpA/MotB [Pseudomonas syringae pv. pisi str. 1704B]
gi|330975430|gb|EGH75496.1| OmpA/MotB [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 260
Score = 84.9 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 2/140 (1%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW- 75
+ + ++ D +I++ LN + + GD V FD + ++P + L +
Sbjct: 110 AKARLEARDAQIAALKNSLNAKQTERGTLVTFGD-VLFDYNKAELKPTAQGDIGKLAGFL 168
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
E D ++EG+ D GS + + +L RRA +V V G+ +R+ YGKE P
Sbjct: 169 QENPDRKVIVEGYTDSTGSASYNQSLSERRANSVRMALVRMGVDPARIVTMGYGKEYPVA 228
Query: 136 YGHDEDAYAKNRRAIVFLKG 155
A NRR V +
Sbjct: 229 DNSSNSGRAMNRRVEVTISN 248
>gi|269139917|ref|YP_003296618.1| peptidoglycan-associated outer membrane lipoprotein [Edwardsiella
tarda EIB202]
gi|267985578|gb|ACY85407.1| peptidoglycan-associated outer membrane lipoprotein [Edwardsiella
tarda EIB202]
gi|304559752|gb|ADM42416.1| Peptidoglycan-associated lipoprotein precursor; Outer membrane
protein P6; OmpA/MotB precursor [Edwardsiella tarda
FL6-60]
Length = 170
Score = 84.9 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 53/169 (31%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDTVLN------------ESSLQEQF 44
MQ + + ++L + + + S N + S N E + +
Sbjct: 1 MQLNKVLKGLMLVLPIMAVAACSSKKNTNDDQSGMGMGANGMENSSSNLSSDEQARLQMQ 60
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGL 103
+ V+F Y + P +Q L ++L + +EGH DE G+ +IALG
Sbjct: 61 ELQKNNIVYFGLDKYDVTPDYMQELDAHAAFLRSNPSYKVTVEGHTDERGTPEYNIALGE 120
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
RRA AV Y +G+SA ++ + SYGKE P+V GHDE AYAKNRRA++
Sbjct: 121 RRANAVKMYLQGKGVSADQIDIVSYGKEKPAVLGHDEAAYAKNRRAVLV 169
>gi|229592294|ref|YP_002874413.1| putative OmpA family lipoprotein [Pseudomonas fluorescens SBW25]
gi|126214996|emb|CAM35533.1| OprL protein [Pseudomonas fluorescens]
gi|229364160|emb|CAY51808.1| putative OmpA family lipoprotein [Pseudomonas fluorescens SBW25]
Length = 166
Score = 84.9 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 39/135 (28%), Positives = 71/135 (52%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+ G +T + SL E+ + + +F+ S ++P ++ L L
Sbjct: 30 AGEGAAVDPNAGYGANTGAVDGSLSEEAALRAITTFYFEYDSSDLKPEAMRALDVHAKDL 89
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ + ++EG+ D G+R ++ALG RRA AV Y V +G++ ++++ SYGKE P
Sbjct: 90 KANGARVVLEGNTDARGTREYNMALGERRAKAVQRYLVLQGVAPGQLELVSYGKERPVAT 149
Query: 137 GHDEDAYAKNRRAIV 151
G+DE ++A+NRR +
Sbjct: 150 GNDEQSWAQNRRVEL 164
>gi|5081414|gb|AAD39369.1|AF117974_1 outer membrane protein OprF [Pseudomonas sp. DC]
Length = 343
Score = 84.9 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 57/138 (41%), Gaps = 4/138 (2%)
Query: 21 IDNLDTKISSPDTVLNES--SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D ++P V ++ V V FD ++P + + NL ++++
Sbjct: 202 CDNVDKCPNTPANVTVDANGCPAVAEVVRVQLDVKFDFDKSVVKPNSYRDIKNLADFMKQ 261
Query: 79 H-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVY 136
+ +EGH D +G + L RRA AV V + A+R+ YG+ P
Sbjct: 262 YPQTTTTVEGHTDSVGPDAYNQKLSERRANAVKQVLVNQYGVGANRVSSVGYGETRPVAD 321
Query: 137 GHDEDAYAKNRRAIVFLK 154
+ A NRR ++
Sbjct: 322 NATDAGRAVNRRVEAEVE 339
>gi|294012887|ref|YP_003546347.1| OmpA-family protein [Sphingobium japonicum UT26S]
gi|292676217|dbj|BAI97735.1| OmpA-family protein [Sphingobium japonicum UT26S]
Length = 226
Score = 84.9 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 55/125 (44%), Gaps = 1/125 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGH 88
+ + ++ + + + F T S +++P L+++ S L ++ + GH
Sbjct: 92 TAGSGVDVIRDGDNLVLRMPSGITFATDSSAVQPQFQPTLNDVASVLAQYPKTYIDVYGH 151
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D G+ + AL RRA AV +Y G+ ++R+ +G+ P + A NRR
Sbjct: 152 TDSDGTDTYNQALSERRAQAVGDYLTTHGVQSARIATRGFGETQPIASNATAEGKASNRR 211
Query: 149 AIVFL 153
+ +
Sbjct: 212 VEIKI 216
>gi|238026336|ref|YP_002910567.1| OmpA domain-containing protein [Burkholderia glumae BGR1]
gi|237875530|gb|ACR27863.1| OmpA domain protein [Burkholderia glumae BGR1]
Length = 170
Score = 84.9 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 15/167 (8%)
Query: 1 MQYSTIFIILSAITMMSISGIDNL---DTKISSPDTVLNESSLQEQFSSSV--------- 48
M + + L+ + + +++ + D K + + + + + + SV
Sbjct: 1 MMTNKARLALAVMMISALAACKSGVKLDDKANQGNAISTQPNPNDVAQVSVDPLNDPNSP 60
Query: 49 --GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRR 105
SV+FD SYS+ +L +L+ H LI+G+ DE G+ ++ALG +R
Sbjct: 61 LAKRSVYFDFDSYSVSDQYQPLLQAHAQYLKSHPARHILIQGNTDERGTSEYNLALGQKR 120
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
A AV G+ S+M+ S GKE P GHDE A+A+NRRA +
Sbjct: 121 AEAVRRGLSLLGVPDSQMEAVSLGKEKPQATGHDEAAWAQNRRADIV 167
>gi|146329003|ref|YP_001209240.1| OmpA family protein [Dichelobacter nodosus VCS1703A]
gi|146232473|gb|ABQ13451.1| OmpA family protein [Dichelobacter nodosus VCS1703A]
Length = 202
Score = 84.9 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 51/138 (36%), Gaps = 3/138 (2%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK-- 78
+ + + E + +FD S++P + L L +
Sbjct: 54 TGCGEQPVVEQAPAQQVEQVLETEVKTFSADTYFDFDKSSLKPEGKAAIQQLAQELNQRG 113
Query: 79 -HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+ + G+ D GS + L RRA AV NY + G+ AS ++ G+ P
Sbjct: 114 ANVRKITVIGNTDSKGSDAYNQKLSERRARAVSNYLIENGVPASIIEAYGNGERQPVASN 173
Query: 138 HDEDAYAKNRRAIVFLKG 155
E A+NRR + + G
Sbjct: 174 DTEAGRAQNRRVDIAVDG 191
>gi|78047093|ref|YP_363268.1| OmpA family outer membrane lipoprotein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|294626580|ref|ZP_06705178.1| OmpA family outer membrane lipoprotein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|294665669|ref|ZP_06730945.1| OmpA family outer membrane lipoprotein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|78035523|emb|CAJ23169.1| OmpA family outer membrane lipoprotein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|292599147|gb|EFF43286.1| OmpA family outer membrane lipoprotein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292604564|gb|EFF47939.1| OmpA family outer membrane lipoprotein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 241
Score = 84.9 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 1/130 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGH 88
+ +T + + S ++ D + FD +++P L+ + S E + + GH
Sbjct: 102 TANTGIEVQRQGDNISLNLPDGITFDFGKSALKPQFYTALNGVASTLREYNQTMVEVVGH 161
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D +GS + L RA AV Y A+G+ RM+ GK P + AKNRR
Sbjct: 162 TDSVGSDAVNQRLSEERASAVAQYLTAQGVQRERMETMGAGKRYPIADNTTDAGRAKNRR 221
Query: 149 AIVFLKGCRA 158
+ L RA
Sbjct: 222 VEIRLIPLRA 231
>gi|255654793|ref|ZP_05400202.1| putative chemotaxis protein [Clostridium difficile QCD-23m63]
gi|296449538|ref|ZP_06891315.1| chemotaxis protein MotB [Clostridium difficile NAP08]
gi|296261602|gb|EFH08420.1| chemotaxis protein MotB [Clostridium difficile NAP08]
Length = 246
Score = 84.9 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 51/136 (37%), Gaps = 5/136 (3%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGH 88
+ ++ S+ D++ FDT ++ + + +G L + + +EGH
Sbjct: 102 NGMANSVSLRVQDRGLVISLKDTILFDTGKAVVKDNSREKIIQIGKMLNEMNSYIRVEGH 161
Query: 89 ADELGS----RNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVYGHDEDAY 143
D + S+ L + RA V + ++ YG+ P E+
Sbjct: 162 TDNMSIKNSEFKSNWDLSVMRATNVVQLLIDNAGIAPDKLSAVGYGEFRPIAENSSEEGR 221
Query: 144 AKNRRAIVFLKGCRAN 159
+KNRR + L + +
Sbjct: 222 SKNRRVDIVLVDSKYD 237
>gi|194365341|ref|YP_002027951.1| OmpA/MotB domain-containing protein [Stenotrophomonas maltophilia
R551-3]
gi|194348145|gb|ACF51268.1| OmpA/MotB domain protein [Stenotrophomonas maltophilia R551-3]
Length = 231
Score = 84.9 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 54/125 (43%), Gaps = 1/125 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGH 88
+ +T ++ + ++ D + FD +++P L+ + L + + GH
Sbjct: 102 TANTGIDVQRQGDNIMLNLPDGITFDFGKATLKPQFYGSLNGVAGTLRDYNQTMIEVVGH 161
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D +GS + L RA +V Y V +G+ + R++ GK P + AKNRR
Sbjct: 162 TDSIGSDAVNNRLSKERADSVAQYLVGQGVQSVRIETLGAGKSYPIADNSTDAGRAKNRR 221
Query: 149 AIVFL 153
+ +
Sbjct: 222 VEIRV 226
>gi|329847657|ref|ZP_08262685.1| inner membrane lipoprotein yiaD [Asticcacaulis biprosthecum C19]
gi|328842720|gb|EGF92289.1| inner membrane lipoprotein yiaD [Asticcacaulis biprosthecum C19]
Length = 208
Score = 84.9 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIA 100
+ S+ V F + S + + VL+++ + L ++ + GHAD G+ ++
Sbjct: 91 DNIILSMPGDVTFSSGSADLNGGFMPVLNDVATILNQYPSTYIDVVGHADSQGTDAFNMD 150
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L RRA AV Y V + + + R+ V G+ P D A+NRR + L+
Sbjct: 151 LSERRANAVAGYLVGQKVKSERIYVAGAGESSPIASNDTADGRARNRRVEITLR 204
>gi|327480660|gb|AEA83970.1| outer membrane protein OprF precursor [Pseudomonas stutzeri DSM
4166]
Length = 299
Score = 84.9 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 2/122 (1%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELG 93
++ V V FD +R + NL +++++ ++EGH D +G
Sbjct: 174 VDTEPEPAPEVVRVELDVKFDFDKSRVREESYSDIKNLADFMQQYPQTTTVVEGHTDSVG 233
Query: 94 SRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ + L RRA AV N V G+ +R+ YG+ P E+ NRR
Sbjct: 234 TDQYNQRLSERRAEAVRNVLVNEYGVQGNRVNSVGYGESRPVADNSTEEGRQINRRVEAE 293
Query: 153 LK 154
++
Sbjct: 294 VE 295
>gi|304321111|ref|YP_003854754.1| hypothetical protein PB2503_07784 [Parvularcula bermudensis
HTCC2503]
gi|303300013|gb|ADM09612.1| hypothetical protein PB2503_07784 [Parvularcula bermudensis
HTCC2503]
Length = 231
Score = 84.9 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 61/128 (47%), Gaps = 1/128 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHA 89
T + + + ++ F T S+RP L+++ +E++ L+EGH
Sbjct: 103 ASTGVRVQRVGNDIRLIMPGNITFATGQASVRPEFYATLNSVAKVIERYQQTAVLVEGHT 162
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D +G+ +S++ L + RA +V NY A+G++ R++ YG+ P + +NRR
Sbjct: 163 DSVGTEDSNVQLSIARAESVGNYLAAQGVAVPRIRAIGYGESQPVASNGTDSGRQQNRRV 222
Query: 150 IVFLKGCR 157
+ L +
Sbjct: 223 EIQLSPTQ 230
>gi|326562151|gb|EGE12479.1| OmpA/MotB domain protein [Moraxella catarrhalis 7169]
gi|326565667|gb|EGE15830.1| OmpA/MotB domain protein [Moraxella catarrhalis 12P80B1]
gi|326566236|gb|EGE16388.1| OmpA/MotB domain protein [Moraxella catarrhalis 103P14B1]
gi|326567112|gb|EGE17234.1| OmpA/MotB domain protein [Moraxella catarrhalis BC1]
gi|326576199|gb|EGE26114.1| OmpA/MotB domain protein [Moraxella catarrhalis CO72]
Length = 224
Score = 84.9 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 55/133 (41%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHD 80
++ ++ + + + ++ ++ F ++ A + L+ L + + H+
Sbjct: 86 KQIEQQMQGTGVTVTHDTDTGNINLTMPGNITFAHDDDTLNSAFLGRLNQLANTMNQYHE 145
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+I GH D G + L RRA +V Y + +G+ R++ YG P E
Sbjct: 146 TTIVIVGHTDSTGQAAYNQELSERRADSVRYYLINQGVDPYRIQTVGYGMRQPIASNATE 205
Query: 141 DAYAKNRRAIVFL 153
A+NRR + +
Sbjct: 206 AGRAQNRRVELMI 218
>gi|296283270|ref|ZP_06861268.1| hypothetical protein CbatJ_06596 [Citromicrobium bathyomarinum
JL354]
Length = 168
Score = 84.9 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 12/158 (7%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQF-----------SSSVGDSVFFDT 56
I+LSA ++ + P + + + + ++FDT
Sbjct: 9 IVLSATVSLAACKSPAPEQLPPEPGVSQPTTGGNTGGPGVGTQEHFVRAVNGQNVIYFDT 68
Query: 57 SSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA 115
Y+I AD L ++ + + IEGHADE G+R ++ALG RRA + NY V+
Sbjct: 69 DRYNIDTADAAALQTQAQYMSQYPNITVTIEGHADERGTREYNLALGERRANSAKNYLVS 128
Query: 116 RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
GI+A+R++ SYG+E P +A+AKNRRA+ +
Sbjct: 129 LGIAANRIRTVSYGEERPVATASTPEAWAKNRRAVTVV 166
>gi|237740939|ref|ZP_04571420.1| outer membrane protein [Fusobacterium sp. 4_1_13]
gi|229430983|gb|EEO41195.1| outer membrane protein [Fusobacterium sp. 4_1_13]
Length = 147
Score = 84.9 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 32/123 (26%), Positives = 59/123 (47%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+LN + +E S+ FD +++P +L N+ ++E+++ + I GH D
Sbjct: 6 GDILNSEAPKEMTIVLDERSLNFDFDKSNVKPQYYDLLKNIKEFVEQNNYEITIVGHTDS 65
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAI 150
+GS + L RRA +V + G+S R+ + + G+E P ++ A+NRR
Sbjct: 66 IGSNAYNFKLSRRRAESVKAKLLEFGLSEDRIVGIEAMGEEQPIATNATKEGRAQNRRVE 125
Query: 151 VFL 153
L
Sbjct: 126 FKL 128
>gi|227824113|ref|YP_002828086.1| putative outer membrane protein, OmpA/MotB domain protein
[Sinorhizobium fredii NGR234]
gi|227343115|gb|ACP27333.1| putative outer membrane protein, OmpA/MotB domain protein
[Sinorhizobium fredii NGR234]
Length = 221
Score = 84.9 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHA 89
T ++ + ++ ++ ++ F T + P L ++ L K++ ++GH
Sbjct: 92 QGTGISVTRQGDRIILNMPSNITFATDRDQVIPPFYPTLDSVAIVLRKYNKTLIDVDGHT 151
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GS + L RRA +V NY +RGI R+ YG E P E A+NRR
Sbjct: 152 DSTGSAAHNQDLSERRAASVANYLGSRGIDQRRISTMGYGMERPVASNSSEAGRAQNRRV 211
Query: 150 IVFL 153
+ +
Sbjct: 212 EISI 215
>gi|222086409|ref|YP_002544943.1| outer membrane lipoprotein [Agrobacterium radiobacter K84]
gi|221723857|gb|ACM27013.1| outer membrane lipoprotein [Agrobacterium radiobacter K84]
Length = 222
Score = 84.9 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 56/124 (45%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHA 89
T ++ + + ++ ++ ++ FD I+P L+++ L K + + GH
Sbjct: 92 QGTGVSVTRVGDRIILNMPSAITFDIDRDEIKPEFFATLNSVAIVLRKFNRTLIDVNGHT 151
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GS + L RRA +V +Y ++GI R+ +G P +E A+NRR
Sbjct: 152 DSTGSLQHNQDLSERRAGSVASYLGSQGIDQRRVSAVGFGPTQPVASNANESGRAQNRRV 211
Query: 150 IVFL 153
+ +
Sbjct: 212 EIQI 215
>gi|149279062|ref|ZP_01885196.1| outer membrane protein, OmpA/MotB family [Pedobacter sp. BAL39]
gi|149230341|gb|EDM35726.1| outer membrane protein, OmpA/MotB family [Pedobacter sp. BAL39]
Length = 439
Score = 84.9 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 53/143 (37%), Gaps = 3/143 (2%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS 70
A T++ SG + + ++ FD IR L+
Sbjct: 299 PAGTVVDGSGCPLKTPAPVEKVIITEA---DRRVVDEAIKNLEFDLGKAVIRQKSYATLN 355
Query: 71 NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
+ + L + + + GH D GS ++ L RA +V Y V++G +ASR++ T YG
Sbjct: 356 RVAALLIEKNFSLKLAGHTDNTGSMALNLRLSKDRAESVKAYLVSQGANASRIEATGYGP 415
Query: 131 EMPSVYGHDEDAYAKNRRAIVFL 153
P NRR L
Sbjct: 416 NQPIATNKTAAGRQANRRVEFTL 438
>gi|311109539|ref|YP_003982392.1| type VI secretion system OmpA/MotB family protein [Achromobacter
xylosoxidans A8]
gi|310764228|gb|ADP19677.1| type VI secretion system OmpA/MotB family protein [Achromobacter
xylosoxidans A8]
Length = 425
Score = 84.9 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 46/124 (37%), Gaps = 5/124 (4%)
Query: 34 VLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG 93
V + GD VF ++ + S+R + VLS + L + L+ G++D
Sbjct: 290 VSVRDEVDRSVVVLRGDGVF-ESGASSVRDQYLPVLSRVADALRETQGSILVRGYSDNTP 348
Query: 94 S----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
S+ L RA AV + R +R++ G P A NRR
Sbjct: 349 MRSARFPSNWHLSQARADAVKDMLEQRLGQTARVRAEGRGDADPVAPNDTAAGRALNRRV 408
Query: 150 IVFL 153
+ +
Sbjct: 409 EITV 412
>gi|114777177|ref|ZP_01452188.1| outer membrane protein [Mariprofundus ferrooxydans PV-1]
gi|114552322|gb|EAU54805.1| outer membrane protein [Mariprofundus ferrooxydans PV-1]
Length = 212
Score = 84.9 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
V+FD S +RPA + L + + + + H D GS +++L RRA +V
Sbjct: 108 VYFDNDSAKLRPASVATLDKAVATLNRRATIKVEVAAHTDSSGSDAYNLSLSERRAASVR 167
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+Y VA GI A+R+ YG+ P ++ AKNRR + +
Sbjct: 168 DYLVAHGIDAARLTSKGYGETQPIASNATKEGRAKNRRVELRVMN 212
>gi|121596298|ref|YP_988194.1| OmpA/MotB domain-containing protein [Acidovorax sp. JS42]
gi|222112527|ref|YP_002554791.1| ompa/motb domain-containing protein [Acidovorax ebreus TPSY]
gi|120608378|gb|ABM44118.1| OmpA/MotB domain protein [Acidovorax sp. JS42]
gi|221731971|gb|ACM34791.1| OmpA/MotB domain protein [Acidovorax ebreus TPSY]
Length = 216
Score = 84.9 bits (208), Expect = 3e-15, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 3/138 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQE-QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
D + ++ T + + + Q + + F T+ I+P +L L +
Sbjct: 76 QKQDMQAATQGTGVTVTQTPDNQLKLDIPSDISFATNRSDIQPNFRPILDRFAEGLRNNP 135
Query: 81 CD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
I GH D GS + L L RA + NY ARG++ +R+ V G P
Sbjct: 136 NTEVRIVGHTDSTGSDAINNPLSLDRAESTRNYLTARGVNGNRIHVEGRGSREPVASNDT 195
Query: 140 EDAYAKNRRAIVFLKGCR 157
D A+NRR +++ G R
Sbjct: 196 SDGRARNRRVEIYV-GER 212
>gi|254450850|ref|ZP_05064287.1| peptidoglycan-associated lipoprotein [Octadecabacter antarcticus
238]
gi|198265256|gb|EDY89526.1| peptidoglycan-associated lipoprotein [Octadecabacter antarcticus
238]
Length = 175
Score = 84.9 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 50/170 (29%), Positives = 85/170 (50%), Gaps = 16/170 (9%)
Query: 1 MQ-YSTIFIILSAITMMSISGIDNLDTKIS--------------SPDTVLNESSLQEQFS 45
M+ + +++ +T+ + + D + + S +N S + FS
Sbjct: 1 MKHFIKFALLIGILTLSACTNADRFNNSDAVDLNGANGANDINQSALDGVNNPSSPQFFS 60
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIALGLR 104
++GD V F+ + ++ L WL + +IEGHADE G+R ++ALG R
Sbjct: 61 QTIGDRVLFEVDTSTLTAVGRNTLDGQAGWLSTNSDYLAVIEGHADEQGTREYNLALGAR 120
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RA AV Y ++RG+++SR++ SYGKE P +E YA+NRRA+ +
Sbjct: 121 RANAVREYLISRGLASSRIRTVSYGKERPLAVCSEESCYAQNRRAVTIIS 170
>gi|171057646|ref|YP_001789995.1| OmpA/MotB domain-containing protein [Leptothrix cholodnii SP-6]
gi|170775091|gb|ACB33230.1| OmpA/MotB domain protein [Leptothrix cholodnii SP-6]
Length = 243
Score = 84.9 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 1/113 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FFDT + ++P L +L S ++ + + +I GH D GS + LG+
Sbjct: 127 VTFAADAFFDTGKFVLKPDAASKLDDLVSKVKDINLEVIIAVGHTDSDGSDAYNQKLGVN 186
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
RA AV Y V++G+ +R+ G++ P ++ AKNRR + + G R
Sbjct: 187 RAEAVKKYLVSKGVEQNRVYTEGKGEKQPVADNGTKEGKAKNRRVEIEVVGTR 239
>gi|59713771|ref|YP_206546.1| OmpA family domain-containing protein [Vibrio fischeri ES114]
gi|197337822|ref|YP_002158145.1| OmpA family protein [Vibrio fischeri MJ11]
gi|59482019|gb|AAW87658.1| OmpA family domain protein [Vibrio fischeri ES114]
gi|197315074|gb|ACH64523.1| OmpA family protein [Vibrio fischeri MJ11]
Length = 184
Score = 84.9 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 34/174 (19%), Positives = 66/174 (37%), Gaps = 21/174 (12%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVL--------------------NESSL 40
M+ + II+SA +M + + + + + +
Sbjct: 1 MKKQLLGIIISASLLMGCQSTSDDEMADIAETPTVASFVDYHNEQLQQFVTEDIGSVAQT 60
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSI 99
E+ + FD+ S I+ VLS L +K + + I GH D GS+ ++
Sbjct: 61 NEEIIILLNGDKSFDSGSIEIKNESKLVLSQLAKLLNDKPESEVFIAGHTDSRGSKKFNM 120
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+L +RA +V G+ +R+ +G+ P + + KNRR + +
Sbjct: 121 SLSNQRADSVLALLEENGVDGNRINTYGFGESEPIATNINAEGRKKNRRIEIRI 174
>gi|21673470|ref|NP_661535.1| peptidoglycan-associated lipoprotein [Chlorobium tepidum TLS]
gi|21646575|gb|AAM71877.1| peptidoglycan-associated lipoprotein [Chlorobium tepidum TLS]
Length = 170
Score = 84.9 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 51/159 (32%), Positives = 75/159 (47%), Gaps = 10/159 (6%)
Query: 6 IFIILSAITMMSISGIDNLD---------TKISSPDTVLNESSLQEQFSSSVGDSVFFDT 56
IIL+ + S D + V E Q + S+ +FFD
Sbjct: 12 AMIILAGCSSKSAVSTDETSRAGYGSGMGGGTGAGAGVSVEDIGQGGKAGSIIGDIFFDF 71
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVA 115
S ++ + L+ +W++K+ +IEGH DE G+ +IALG RRA A Y V
Sbjct: 72 DSSALSSEAQEQLNQNAAWMQKNPTSAVIIEGHCDERGTDEYNIALGERRAEAARMYLVN 131
Query: 116 RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G+S R+ SYG+E P GH+E+A+AKNRR +K
Sbjct: 132 LGVSGGRLSTVSYGEEKPFDPGHNEEAWAKNRRDHFVVK 170
>gi|15889974|ref|NP_355655.1| porin [Agrobacterium tumefaciens str. C58]
gi|15157937|gb|AAK88440.1| porin [Agrobacterium tumefaciens str. C58]
Length = 220
Score = 84.9 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 56/138 (40%), Gaps = 1/138 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ + T ++ + + ++ ++ F T + P Q L ++ L K +
Sbjct: 83 QEAELRAQLQGTGVSVTRRGDSIVLNMPSNITFATDQDQVIPPFYQTLDSVAIVLNKFNR 142
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
I GH D GS + AL RRA +V NY ARG+ R+ +G P
Sbjct: 143 TLIDINGHTDSTGSLQHNQALSERRAASVANYLGARGVDQRRISTLGFGPSQPIASNATS 202
Query: 141 DAYAKNRRAIVFLKGCRA 158
D A+NRR V + +
Sbjct: 203 DGRAQNRRVEVLISPLKG 220
>gi|325923199|ref|ZP_08184883.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Xanthomonas gardneri ATCC 19865]
gi|325546323|gb|EGD17493.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Xanthomonas gardneri ATCC 19865]
Length = 249
Score = 84.9 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 1/130 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGH 88
+ +T + + + ++ D + FD +++P L+ + S E + + GH
Sbjct: 110 TANTGIEVQRQGDNITLNLPDGITFDFGKSALKPQFYSALNGVASTLREYNQTMVEVVGH 169
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D +GS + L RA AV Y A+G+ RM+ GK P + + A+NRR
Sbjct: 170 TDSVGSDAVNQRLSEERAGAVAQYLTAQGVQRERMETMGAGKRYPIADNNTDAGRAQNRR 229
Query: 149 AIVFLKGCRA 158
+ L R+
Sbjct: 230 VEIRLIPLRS 239
>gi|254299066|ref|ZP_04966516.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei 406e]
gi|157809033|gb|EDO86203.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
pseudomallei 406e]
Length = 169
Score = 84.9 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 12/163 (7%)
Query: 2 QYSTIFIILSAITMMSISG-------IDNLDTKISSPDTVLNESSLQEQFSSS----VGD 50
+ F +L + + + D + P+ + +
Sbjct: 4 KLRLAFAMLMIGALAACKSGVKLDEHANQGDAVSTQPNPENVAQVTVDPLNDPNSPLAKR 63
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAV 109
SV+FD SYS++ +L +L+ H LI+G+ DE G+ ++ALG +RA AV
Sbjct: 64 SVYFDFDSYSVQDQYQALLQQHAQYLKSHPQRHILIQGNTDERGTSEYNLALGQKRAEAV 123
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
G+ ++M+ S GKE P GHDE ++A+NRRA +
Sbjct: 124 RRALSLLGVGDAQMEAVSLGKEKPVALGHDEASWAQNRRADLV 166
>gi|170722686|ref|YP_001750374.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619]
gi|169760689|gb|ACA74005.1| OmpA/MotB domain protein [Pseudomonas putida W619]
Length = 270
Score = 84.9 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 32/144 (22%), Positives = 60/144 (41%), Gaps = 2/144 (1%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
++ + + + L ++GD V FDT ++ + + + L +
Sbjct: 122 AKLASVQQQGEWVEAQIAALASQQADRGLVMTLGD-VLFDTGRADLKNSASRTVLKLVQF 180
Query: 76 LEKHDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
L+ + + IEG+AD G+ ++ L RA AV + V G+ R++V YG + P
Sbjct: 181 LQLNPRRVVRIEGYADNTGAPEDNLKLSRDRAQAVADMLVDLGVDEKRLQVEGYGDQYPI 240
Query: 135 VYGHDEDAYAKNRRAIVFLKGCRA 158
E A+NRR + +
Sbjct: 241 EANASERGRAQNRRVEIVFSDDKG 264
>gi|325279770|ref|YP_004252312.1| OmpA/MotB domain-containing protein [Odoribacter splanchnicus DSM
20712]
gi|324311579|gb|ADY32132.1| OmpA/MotB domain protein [Odoribacter splanchnicus DSM 20712]
Length = 625
Score = 84.9 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 1/104 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+FFD Y +RP L L + + + I GH D GS + L RA+ V+
Sbjct: 522 IFFDVDDYRLRPESYPELRQLVVFLKQNPEVKIEISGHTDNTGSDQHNYRLSENRAFEVY 581
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
Y I RM+ YGK+ P E+ +NRR + ++
Sbjct: 582 KYLFLNHIQKERMEYKGYGKDRPLRTNDTEEGRKENRRTEIRVR 625
>gi|332716442|ref|YP_004443908.1| outer membrane lipoprotein omp16 [Agrobacterium sp. H13-3]
gi|325063127|gb|ADY66817.1| outer membrane lipoprotein omp16 [Agrobacterium sp. H13-3]
Length = 177
Score = 84.9 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 53/155 (34%), Positives = 79/155 (50%), Gaps = 7/155 (4%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTV------LNESSLQEQFSSSVGDSVFFDTSSYSIR 62
+++ ++++G N +S + Q+ F+ +VGD +FFDT S SIR
Sbjct: 21 VIAMTLALALAGCANKKNMPNSAGELGLGGAGSATPGSQQDFTVNVGDRIFFDTDSTSIR 80
Query: 63 PADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS 121
Q L W +EGHADE G+R ++ALG RRA A ++ ++G+ AS
Sbjct: 81 ADAQQTLQRQAQWLARYPKYAITVEGHADERGTREYNLALGARRAAATRDFLASQGVPAS 140
Query: 122 RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
RMK SYGKE P D +++NRRA+ L G
Sbjct: 141 RMKTISYGKEKPVAVCDDISCWSQNRRAVTVLGGA 175
>gi|296878139|ref|ZP_06902154.1| chemotaxis protein MotB [Clostridium difficile NAP07]
gi|296430892|gb|EFH16724.1| chemotaxis protein MotB [Clostridium difficile NAP07]
Length = 248
Score = 84.9 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 51/136 (37%), Gaps = 5/136 (3%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGH 88
+ ++ S+ D++ FDT ++ + + +G L + + +EGH
Sbjct: 104 NGMANSVSLRVQDRGLVISLKDTILFDTGKAVVKDNSREKIIQIGKMLNEMNSYIRVEGH 163
Query: 89 ADELGS----RNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVYGHDEDAY 143
D + S+ L + RA V + ++ YG+ P E+
Sbjct: 164 TDNMSIKNSEFKSNWDLSVMRATNVVQLLIDNAGIAPDKLSAVGYGEFRPIAENSSEEGR 223
Query: 144 AKNRRAIVFLKGCRAN 159
+KNRR + L + +
Sbjct: 224 SKNRRVDIVLVDSKYD 239
>gi|153956379|ref|YP_001397144.1| hypothetical protein CKL_3788 [Clostridium kluyveri DSM 555]
gi|219856692|ref|YP_002473814.1| hypothetical protein CKR_3349 [Clostridium kluyveri NBRC 12016]
gi|146349237|gb|EDK35773.1| MotB [Clostridium kluyveri DSM 555]
gi|219570416|dbj|BAH08400.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 254
Score = 84.9 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 5/138 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ S ++ S + S+ DS+ FDT I+P Q L +G L + IE
Sbjct: 103 QNSEMSGSVSTSINERGLIVSMNDSLLFDTGKADIKPEFQQKLVEIGKILNQLGNYMRIE 162
Query: 87 GHADELGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDED 141
GH D + +S+ L RA V + + GI ++ YG+ P ++
Sbjct: 163 GHTDNIPISNNQYSSNWKLSCDRASNVTEFLIKSAGIEPEKLSAIGYGEYRPVGDNSTDE 222
Query: 142 AYAKNRRAIVFLKGCRAN 159
AKNRR + + + N
Sbjct: 223 GKAKNRRVDIVILNSKFN 240
>gi|49083000|gb|AAT50900.1| PA3692 [synthetic construct]
Length = 262
Score = 84.9 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 61/145 (42%), Gaps = 2/145 (1%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
A + + +D ++ + LN + GD V FD ++P ++ +
Sbjct: 105 ASAQRAQARLDARTAQLDKLRSQLNAKQTSRGTMVTFGD-VLFDLDKSDLKPGAMRNIQQ 163
Query: 72 LGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
L + + + ++EG+ D GS N + L RRA +V ++RGIS R+ YGK
Sbjct: 164 LAEFLQQNPERQVIVEGYTDSTGSANYNQRLSERRADSVRMALLSRGISPERVATRGYGK 223
Query: 131 EMPSVYGHDEDAYAKNRRAIVFLKG 155
E P A NRR V +
Sbjct: 224 EYPVASNGTSSGRAMNRRVEVTISN 248
>gi|153213818|ref|ZP_01949026.1| outer membrane protein OmpA [Vibrio cholerae 1587]
gi|229524210|ref|ZP_04413615.1| outer membrane protein A precursor [Vibrio cholerae bv. albensis
VL426]
gi|124115742|gb|EAY34562.1| outer membrane protein OmpA [Vibrio cholerae 1587]
gi|229337791|gb|EEO02808.1| outer membrane protein A precursor [Vibrio cholerae bv. albensis
VL426]
Length = 321
Score = 84.9 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
DS F T+S ++PA +Q L + + + + GH D GS + L RRA A
Sbjct: 208 DSSTFATASAELKPATVQKLDKIVGYLNQYPQAKVEVVGHTDSTGSEAYNQKLSERRAQA 267
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V A+GI ASR+ G+ P + KNRR + +
Sbjct: 268 VAKALEAQGIDASRISAKGLGESSPIASNATAEGREKNRRVELVI 312
>gi|4580968|gb|AAD24555.1|AF117963_1 OprF [Pseudomonas cichorii]
Length = 346
Score = 84.9 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 57/138 (41%), Gaps = 4/138 (2%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D ++P V ++ + V V FD ++P + NL ++++
Sbjct: 205 CDNVDKCPNTPANVTVDADGCPAVAEVVRVELDVKFDFDKAVVKPNSYGDIKNLADFMQQ 264
Query: 79 H-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVY 136
+ +EGH D +G + L RRA AV V + A+R+ YG+ P
Sbjct: 265 YPQTTTTVEGHTDSVGPDAYNQKLSERRASAVKQVLVNQYGVGANRVNSVGYGETRPVAD 324
Query: 137 GHDEDAYAKNRRAIVFLK 154
E A NRR ++
Sbjct: 325 NATEAGRAVNRRVEAEVE 342
>gi|229513857|ref|ZP_04403319.1| outer membrane protein A precursor [Vibrio cholerae TMA 21]
gi|262192122|ref|ZP_06050283.1| outer membrane protein A precursor [Vibrio cholerae CT 5369-93]
gi|297580859|ref|ZP_06942784.1| outer membrane protein OmpA [Vibrio cholerae RC385]
gi|229349038|gb|EEO13995.1| outer membrane protein A precursor [Vibrio cholerae TMA 21]
gi|262031971|gb|EEY50548.1| outer membrane protein A precursor [Vibrio cholerae CT 5369-93]
gi|297534685|gb|EFH73521.1| outer membrane protein OmpA [Vibrio cholerae RC385]
Length = 321
Score = 84.9 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
DS F T+S ++PA +Q L + + + + GH D GS + L RRA A
Sbjct: 208 DSSTFATASAELKPATVQKLDKIVGYLNQYPQAKVEVVGHTDSTGSEAYNQKLSERRAQA 267
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V A+GI ASR+ G+ P + KNRR + +
Sbjct: 268 VAKALEAQGIDASRISAKGLGESSPIASNATAEGREKNRRVELVI 312
>gi|124267239|ref|YP_001021243.1| outer membrane protein [Methylibium petroleiphilum PM1]
gi|124260014|gb|ABM95008.1| outer membrane protein [Methylibium petroleiphilum PM1]
Length = 235
Score = 84.9 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 33/130 (25%), Positives = 53/130 (40%), Gaps = 1/130 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFL 84
+ + V + Q +V + FDT +I+P VL + +
Sbjct: 93 EQSTQGTGVDVTRTADNQLKLNVPSDISFDTGKSAIKPELRTVLDSFANGLANDPALQVR 152
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+ GH D GS + L + RA +V +Y RGI +R++ + G P E A
Sbjct: 153 VIGHTDSTGSDAINNPLSVDRAQSVRDYLAGRGILPTRIETSGRGSHEPIADNTSEAGRA 212
Query: 145 KNRRAIVFLK 154
KNRR + L+
Sbjct: 213 KNRRVEILLR 222
>gi|300690749|ref|YP_003751744.1| outer membrane lipoprotein [Ralstonia solanacearum PSI07]
gi|299077809|emb|CBJ50447.1| putative outer membrane lipoprotein [Ralstonia solanacearum PSI07]
Length = 209
Score = 84.9 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 60/140 (42%), Gaps = 1/140 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
I + T ++ ++ V FDT S I+P+ L ++ +
Sbjct: 70 AIKSKLTGDTAGTGTQISEQPDGSLKLNIPSQVSFDTDSAVIKPSFRGPLDSVAETLTQH 129
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ + GH D G+ N +++L RRA +V +Y RG++ +R+ G+ P
Sbjct: 130 PELAANVVGHTDSTGNPNYNMSLSQRRAQSVTSYLTDRGVARNRLTAEGRGQTQPVGDNA 189
Query: 139 DEDAYAKNRRAIVFLKGCRA 158
E ++NRR ++LK +
Sbjct: 190 TEAGRSQNRRVEIYLKPIQG 209
>gi|326316328|ref|YP_004234000.1| type IV / VI secretion system protein, DotU family [Acidovorax
avenae subsp. avenae ATCC 19860]
gi|323373164|gb|ADX45433.1| type IV / VI secretion system protein, DotU family [Acidovorax
avenae subsp. avenae ATCC 19860]
Length = 450
Score = 84.9 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 49/126 (38%), Gaps = 4/126 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ ++ + ++ + ++ F+ +S ++P + V+ + S L + ++ G++D
Sbjct: 295 EGLVEVNDQADRSTVTLRGDGLFEPASTEVKPRYVAVIQRVASALNEVSGKVVVNGYSDN 354
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
S+ L RA AV SR+K + P + A NR
Sbjct: 355 QPIRTARFPSNWHLSQERAQAVAAMLQRTITDGSRVKAEGRAESDPIAPNSTPEGRALNR 414
Query: 148 RAIVFL 153
R + L
Sbjct: 415 RVEIVL 420
>gi|118474477|ref|YP_891591.1| outer membrane fibronectin-binding protein [Campylobacter fetus
subsp. fetus 82-40]
gi|118413703|gb|ABK82123.1| outer membrane fibronectin-binding protein [Campylobacter fetus
subsp. fetus 82-40]
Length = 345
Score = 84.9 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 54/130 (41%), Gaps = 2/130 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHD 80
DN+D +P V+ + E+ + F S + P + + + +
Sbjct: 211 DNVDRCPGTPKGVVVDEYGCEK-VIRLSLKANFAFDSAKVTPEYEAKIKEVADVMVANPE 269
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++EGH D G + + L ++RA AV G+S +++ +G+E P +
Sbjct: 270 YRVILEGHTDSTGPEDYNKKLSVKRADAVAATLEKMGVSKNKITTVGFGEEQPIASNATK 329
Query: 141 DAYAKNRRAI 150
+ A+NRR
Sbjct: 330 EGRAENRRVE 339
>gi|167837695|ref|ZP_02464578.1| outer membrane protein, OmpA family [Burkholderia thailandensis
MSMB43]
Length = 170
Score = 84.9 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 78/167 (46%), Gaps = 15/167 (8%)
Query: 1 MQYSTIFIILSAITMMSISGIDN-------------LDTKISSPDTV-LNESSLQEQFSS 46
M + + + + + +++ + + T+ + + + L + S
Sbjct: 1 MMSKKLRLAFAMLMIGALAACKSGVKLDEHANQGGAVSTQPNPENVAQVTVDPLNDPNSP 60
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRR 105
SV+FD SYS++ +L +L+ H LI+G+ DE G+ ++ALG +R
Sbjct: 61 LAKRSVYFDFDSYSVQDQYQSLLQQHAQYLKSHPQRHILIQGNTDERGTSEYNLALGQKR 120
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
A AV G+ ++M+ S GKE P GHDE ++A+NRRA +
Sbjct: 121 AEAVRRALSLLGVGDAQMEAVSLGKEKPVALGHDEASWAQNRRADLV 167
>gi|254473994|ref|ZP_05087387.1| OmpA family protein [Pseudovibrio sp. JE062]
gi|211956883|gb|EEA92090.1| OmpA family protein [Pseudovibrio sp. JE062]
Length = 220
Score = 84.9 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 55/125 (44%), Gaps = 1/125 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHA 89
+ ++ + Q ++ + V F ++ +QVL+++ ++ + GH
Sbjct: 93 QSSGVSVTRNGNQIVLNMPNDVTFAVGQATLSSRAMQVLNSVALVAKEFPQTRLNVYGHT 152
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GS ++ L RRA +V NY +G++ +R+ YG P E A+NRR
Sbjct: 153 DNTGSAQFNLQLSQRRADSVSNYLFNQGVNGARISAAGYGLTSPIASNATEAGRAQNRRV 212
Query: 150 IVFLK 154
+ L
Sbjct: 213 EIILS 217
>gi|26987509|ref|NP_742934.1| OmpA/MotB domain protein [Pseudomonas putida KT2440]
gi|24982176|gb|AAN66398.1|AE016267_7 OmpA family protein [Pseudomonas putida KT2440]
Length = 236
Score = 84.9 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 1/134 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG-SWLEKHD 80
+ + +T + +Q + ++ F T S +I P+ L+NL S+ + +
Sbjct: 86 QEAELRAQMANTGVEVQRQGDQIKLIMPGNITFATDSANIAPSFYSPLNNLAGSFKQFNQ 145
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ G D GSR ++ L RRA AV Y ++G+ ASR+ V G + P D
Sbjct: 146 NTIEVVGFTDSTGSRQHNMDLSQRRAQAVSTYLTSQGVDASRISVRGMGPDQPIASNADA 205
Query: 141 DAYAKNRRAIVFLK 154
+ A+NRR V LK
Sbjct: 206 NGRAQNRRVEVNLK 219
>gi|130681|sp|P22263|PORF_PSESY RecName: Full=Outer membrane porin F; Flags: Precursor
gi|151407|gb|AAA25910.1| oprF [Pseudomonas syringae]
Length = 344
Score = 84.9 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 56/138 (40%), Gaps = 4/138 (2%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD ++P + NL ++++
Sbjct: 203 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMQQ 262
Query: 79 H-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVY 136
+ +EGH D +G + L RRA AV V + ASR+ YG+ P
Sbjct: 263 YPQTTTTVEGHTDSVGPDAYNQKLSERRANAVKQVLVNQYGVGASRVNSVGYGESKPVAD 322
Query: 137 GHDEDAYAKNRRAIVFLK 154
E A NRR ++
Sbjct: 323 NATEAGRAVNRRVEAEVE 340
>gi|332975535|gb|EGK12425.1| OmpA domain protein [Desmospora sp. 8437]
Length = 243
Score = 84.9 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 1/114 (0%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIA 100
++ V + FDT +IR L LG L+++ I G+ D+ GS +
Sbjct: 127 AKKVVIHVPGHILFDTDQSTIRAKARPELDKLGKSLKEYKGTVRIYGYTDDRGSAAYNQK 186
Query: 101 LGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA AV Y V A +K+ +GK+ P V + + KNRR + +
Sbjct: 187 LSQERAEAVKAYLVKECGIAGDHLKIKGFGKKHPVVPNNSDSNRQKNRRVEIIV 240
>gi|284035694|ref|YP_003385624.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
gi|283814987|gb|ADB36825.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
Length = 236
Score = 84.9 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
D +I + E S+G + FD SY+++P Q L + D
Sbjct: 87 DKQAEEIKRQMPNAQVERVGEGIKVSLGSDILFDVDSYALKPETKQQLIEFAKSLNKYED 146
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
D IEGHAD GS + ++ L +RA AV ++ ++G+ SR+ YG+ P E
Sbjct: 147 TDVRIEGHADATGSDSHNLELSKQRAKAVGSFLESQGVKTSRVDEIGYGEAQPVADNSTE 206
Query: 141 DAYAKNRRAIVFL 153
KNRR V +
Sbjct: 207 AGRRKNRRVDVAV 219
>gi|150397824|ref|YP_001328291.1| peptidoglycan-associated lipoprotein [Sinorhizobium medicae WSM419]
gi|150029339|gb|ABR61456.1| Peptidoglycan-associated lipoprotein [Sinorhizobium medicae WSM419]
Length = 176
Score = 84.9 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 52/155 (33%), Positives = 81/155 (52%), Gaps = 6/155 (3%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTVLN-----ESSLQEQFSSSVGDSVFFDTSSYSIR 62
I+++ + ++++G + + + Q+ F+ +VGD +FFDT S SIR
Sbjct: 20 IMIALVMTLALAGCASKKNLPNDAAGLGLGAGAATPGSQQDFTVNVGDRIFFDTDSTSIR 79
Query: 63 PADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS 121
L W + + IEGHADE G+R ++ALG RRA A +Y V+RG+ +
Sbjct: 80 ADAQTTLDRQAQWLAKYPNYAVTIEGHADERGTREYNLALGARRAAATRDYLVSRGVPGN 139
Query: 122 RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
RM+ SYGKE P D +++NRRA+ L G
Sbjct: 140 RMRTISYGKEKPVAVCDDISCWSQNRRAVTVLGGA 174
>gi|99082204|ref|YP_614358.1| OmpA/MotB [Ruegeria sp. TM1040]
gi|99038484|gb|ABF65096.1| OmpA/MotB [Ruegeria sp. TM1040]
Length = 167
Score = 84.9 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 51/159 (32%), Positives = 79/159 (49%), Gaps = 7/159 (4%)
Query: 4 STIFIILSAITMMSISGIDNLDTKI------SSPDTVLNESSLQEQFSSSVGDSVFFDTS 57
T ++++ + + + S DT D L + S F +VGD V F
Sbjct: 5 KTAILLVAGLALSACSDTRWDDTSAGNGGSGIGVDGGLGDPSSPAYFREAVGDRVLFLVD 64
Query: 58 SYSIRPADIQVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
SI P +L WL+ + IEGHADE G+R ++ALG RA + +Y +++
Sbjct: 65 QSSISPEAQVILDGQARWLQANPAYVVTIEGHADERGTREYNLALGASRANSARDYLISK 124
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
G++ASR++ S+GKE P ++ Y KNRRA+ L G
Sbjct: 125 GVAASRIQTVSFGKERPIEICSEQSCYEKNRRAVTVLAG 163
>gi|332533226|ref|ZP_08409093.1| putative lipoprotein [Pseudoalteromonas haloplanktis ANT/505]
gi|332037305|gb|EGI73760.1| putative lipoprotein [Pseudoalteromonas haloplanktis ANT/505]
Length = 210
Score = 84.9 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 49/124 (39%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHA 89
+ + + + ++ F T I L + + K++ IEGH
Sbjct: 81 AGSGVEVVREGDNLRLVMPSNITFATDQSYISSGFNDTLDAIAKVMNKYEKTYLSIEGHT 140
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G + ++ L RA +V NY V + I A R+ YG+ P + A+NRR
Sbjct: 141 DSTGKDSYNMNLSRERAQSVKNYLVNQQIMAERVSTMGYGETRPIATNDSANGRAQNRRV 200
Query: 150 IVFL 153
+ +
Sbjct: 201 EIQI 204
>gi|330975320|gb|EGH75386.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
aptata str. DSM 50252]
Length = 167
Score = 84.9 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 38/127 (29%), Positives = 71/127 (55%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL 84
++ + SL E+ + + +F+ S ++P ++ L L+ + +
Sbjct: 39 PNAGYGANSGAVDGSLSEEAALRAITTFYFEYDSSDLKPEAMRSLDVHAKDLKANGARVV 98
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+EG+ DE G+R ++ALG RRA AV Y V +G+S +++++ SYG+E P G+DE ++A
Sbjct: 99 LEGNTDERGTREYNMALGERRAKAVQRYLVLQGVSPAQLELVSYGEERPVATGNDEQSWA 158
Query: 145 KNRRAIV 151
+NRR +
Sbjct: 159 QNRRVEL 165
>gi|327481242|gb|AEA84552.1| flagellar motor protein MotD [Pseudomonas stutzeri DSM 4166]
Length = 278
Score = 84.9 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 44/115 (38%), Gaps = 4/115 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ S+ F + Q++ + L D +EG D L ++
Sbjct: 128 IEIELSSSLLFPSGDALPNNQAFQLIDKVAGILAPFDNPVHVEGFTDNLPISTDKFPTNW 187
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L RA +V A+G++ SR+ YG+ P + A+NRR ++ +
Sbjct: 188 ELSAARAGSVVRMLAAQGVNPSRLAAVGYGEFQPVADNATAEGRARNRRVVLVVS 242
>gi|258625264|ref|ZP_05720172.1| outer membrane protein OmpA [Vibrio mimicus VM603]
gi|258582437|gb|EEW07278.1| outer membrane protein OmpA [Vibrio mimicus VM603]
Length = 328
Score = 84.9 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 55/138 (39%), Gaps = 1/138 (0%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW- 75
+ + + + V+ + ++ + F+ DS F +S ++P+ L L +
Sbjct: 182 AAVEQRPAEPAPVAEEPVVEKVAVTKTFTFQHLDSGTFANNSAELKPSMETKLDKLVGYL 241
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+ + GH D GS + L +RA AV A+G+ A+R+ + P
Sbjct: 242 NQYPQAKVEVVGHTDSNGSEAYNQKLSEKRAQAVAKALEAQGVDAARITAKGQDESNPIA 301
Query: 136 YGHDEDAYAKNRRAIVFL 153
+ KNRR + +
Sbjct: 302 SNATAEGREKNRRVELVI 319
>gi|116253708|ref|YP_769546.1| OmpA family peptidoglycan-associated lipoprotein precursor
[Rhizobium leguminosarum bv. viciae 3841]
gi|115258356|emb|CAK09458.1| putative OmpA family peptidoglycan-associated lipoprotein precursor
[Rhizobium leguminosarum bv. viciae 3841]
Length = 177
Score = 84.9 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 50/155 (32%), Positives = 77/155 (49%), Gaps = 4/155 (2%)
Query: 6 IFIILSAITMMSISGIDNLDTKISSPDTVLN---ESSLQEQFSSSVGDSVFFDTSSYSIR 62
+ +++ + + S + + ++ + F+ +VGD +FFDT S SIR
Sbjct: 21 MIALIAGLALASCAKKNVPNSAGDLGLGAGAGAATPGSAQDFTVNVGDRIFFDTDSSSIR 80
Query: 63 PADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS 121
Q L W + +EGHADE G+R ++ALG RRA A +Y +RG+ A
Sbjct: 81 ADASQTLDRQAQWLGRYPNYQITVEGHADERGTREYNLALGARRAAAAKDYLASRGVPAQ 140
Query: 122 RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
R+K SYGKE P D +++NRRA+ L G
Sbjct: 141 RLKTISYGKERPVAVCDDISCWSQNRRAVTVLGGA 175
>gi|15966491|ref|NP_386844.1| peptidoglycan-associated lipoprotein precursor [Sinorhizobium
meliloti 1021]
gi|307300472|ref|ZP_07580252.1| peptidoglycan-associated lipoprotein [Sinorhizobium meliloti
BL225C]
gi|307318337|ref|ZP_07597772.1| peptidoglycan-associated lipoprotein [Sinorhizobium meliloti AK83]
gi|22653891|sp|Q926C3|OMP16_RHIME RecName: Full=Outer membrane lipoprotein omp16 homolog; Flags:
Precursor
gi|15075762|emb|CAC47317.1| Peptidoglycan-associated lipoprotein [Sinorhizobium meliloti 1021]
gi|306896019|gb|EFN26770.1| peptidoglycan-associated lipoprotein [Sinorhizobium meliloti AK83]
gi|306904638|gb|EFN35222.1| peptidoglycan-associated lipoprotein [Sinorhizobium meliloti
BL225C]
Length = 176
Score = 84.9 bits (208), Expect = 4e-15, Method: Composition-based stats.
Identities = 51/155 (32%), Positives = 81/155 (52%), Gaps = 6/155 (3%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTVLN-----ESSLQEQFSSSVGDSVFFDTSSYSIR 62
++++ + ++++G + + + Q+ F+ +VGD +FFDT S SIR
Sbjct: 20 VMIALVMTLALAGCASKKNLPNDAAGLGLGAGAATPGSQQDFTVNVGDRIFFDTDSTSIR 79
Query: 63 PADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS 121
L W + + IEGHADE G+R ++ALG RRA A +Y V+RG+ +
Sbjct: 80 ADAQATLDRQAQWLAKYPNYGITIEGHADERGTREYNLALGARRAAATRDYLVSRGVPGN 139
Query: 122 RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
RM+ SYGKE P D +++NRRA+ L G
Sbjct: 140 RMRTISYGKEKPVAVCDDISCWSQNRRAVTVLGGA 174
>gi|313144174|ref|ZP_07806367.1| OmpA family protein [Helicobacter cinaedi CCUG 18818]
gi|313129205|gb|EFR46822.1| OmpA family protein [Helicobacter cinaedi CCUG 18818]
Length = 156
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 48/123 (39%), Gaps = 1/123 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
T ++ S + ++ + F + S + +VL+ + + G D
Sbjct: 22 QGTGVSVSREGDGIILNMPGDITFKSGSDDLSSDFYKVLNKKVLN-KYDKTIVTVVGFTD 80
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS +++AL +RA +V Y + + R V G+ P + AKNRR
Sbjct: 81 NTGSDKTNLALSKKRAESVAAYLQNQKVKTERFVVDGLGESEPIASNKTAEGRAKNRRVE 140
Query: 151 VFL 153
+ L
Sbjct: 141 ISL 143
>gi|262275699|ref|ZP_06053508.1| outer membrane protein A precursor [Grimontia hollisae CIP 101886]
gi|262219507|gb|EEY70823.1| outer membrane protein A precursor [Grimontia hollisae CIP 101886]
Length = 331
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 2/113 (1%)
Query: 41 QEQFSSSVGDSV-FFDTSSYSIRPADIQVL-SNLGSWLEKHDCDFLIEGHADELGSRNSS 98
Q+++ S D+V F + P Q L L + I GH D +GS +
Sbjct: 210 QKKYVFSEADNVELFAFGKAELSPNASQQLGPMLKRLQNFDEATATIIGHTDSVGSEAFN 269
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
L +RA +V NYF++ GISA R+ + G+ P ++ AKNRR +
Sbjct: 270 QKLSEQRAQSVANYFISNGISAERLTIIGKGETSPIASNKTKEGRAKNRRVEI 322
>gi|332534220|ref|ZP_08410065.1| 18K peptidoglycan-associated outer membrane lipoprotein
[Pseudoalteromonas haloplanktis ANT/505]
gi|332036300|gb|EGI72771.1| 18K peptidoglycan-associated outer membrane lipoprotein
[Pseudoalteromonas haloplanktis ANT/505]
Length = 180
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 51/179 (28%), Positives = 79/179 (44%), Gaps = 27/179 (15%)
Query: 1 MQYSTIF---------IILSAITMMS-----------------ISGIDNLDTKISSPDTV 34
MQ + I + L+A + S + D ++ SP+
Sbjct: 1 MQLNKILKGLLIAVPVMTLAACSSSSDIDEGAANQSNQGVVEQSTNTDTVEVATISPEQQ 60
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELG 93
E Q+ + ++FD ++ +L + ++ LIEGHADE G
Sbjct: 61 AEEQLRQKYEALRQEQVIYFDFDKATVEGKYADLLRAHAEFLVQNPSVKVLIEGHADERG 120
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ +IALG R AV Y ++ G+SAS+M V SYG+E P V E A+AKNRRA++
Sbjct: 121 TPEYNIALGEHRGQAVEKYLLSLGVSASQMSVVSYGEEKPMVKSRTESAFAKNRRAVLV 179
>gi|302185648|ref|ZP_07262321.1| thrombospondin type 3 repeat-containing OmpA/MotB protein
[Pseudomonas syringae pv. syringae 642]
Length = 344
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 56/138 (40%), Gaps = 4/138 (2%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD ++P + NL ++++
Sbjct: 203 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMQQ 262
Query: 79 H-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVY 136
+ +EGH D +G + L RRA AV V + ASR+ YG+ P
Sbjct: 263 YPQTTTTVEGHTDSVGPDAYNQKLSERRANAVKQVLVNQYGVGASRVNSVGYGETKPVAD 322
Query: 137 GHDEDAYAKNRRAIVFLK 154
E A NRR ++
Sbjct: 323 NATEAGRAVNRRVEAEVE 340
>gi|289673277|ref|ZP_06494167.1| thrombospondin type 3 repeat-containing OmpA/MotB protein
[Pseudomonas syringae pv. syringae FF5]
gi|330977632|gb|EGH77539.1| thrombospondin type 3 repeat-containing OmpA/MotB protein
[Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 344
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 56/138 (40%), Gaps = 4/138 (2%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD ++P + NL ++++
Sbjct: 203 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMQQ 262
Query: 79 H-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVY 136
+ +EGH D +G + L RRA AV V + ASR+ YG+ P
Sbjct: 263 YPQTTTTVEGHTDSVGPDAYNQKLSERRANAVKQVLVNQYGVGASRVNSVGYGESKPVAD 322
Query: 137 GHDEDAYAKNRRAIVFLK 154
E A NRR ++
Sbjct: 323 NATEAGRAVNRRVEAEVE 340
>gi|218462392|ref|ZP_03502483.1| OmpA family peptidoglycan-associated lipoprotein precursor
[Rhizobium etli Kim 5]
Length = 177
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 50/156 (32%), Positives = 77/156 (49%), Gaps = 7/156 (4%)
Query: 8 IILSAITMMSISGIDNLDT------KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSI 61
++++ + ++++ + + + F+ +VGD +FFDT S SI
Sbjct: 20 VMIALVAGLALASCAKKPPNSAGDLGLGAGAGGAATPGSAQDFTVNVGDRIFFDTDSSSI 79
Query: 62 RPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA 120
R Q L W + +EGHADE G+R ++ALG RRA A +Y +RG+ A
Sbjct: 80 RADASQTLDRQAQWLGRYPNYQITVEGHADERGTREYNLALGARRAAAAKDYLASRGVPA 139
Query: 121 SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
RMK SYGKE P D +++NRRA+ L G
Sbjct: 140 QRMKTISYGKERPVAVCDDISCWSQNRRAVTVLGGA 175
>gi|325928737|ref|ZP_08189907.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Xanthomonas perforans 91-118]
gi|325540905|gb|EGD12477.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Xanthomonas perforans 91-118]
Length = 229
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 1/130 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGH 88
+ +T + + S ++ D + FD +++P L+ + S E + + GH
Sbjct: 90 TANTGIEVQRQGDNISLNLPDGITFDFGKSALKPQFYTALNGVASTLREYNQTMVEVVGH 149
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D +GS + L RA AV Y A+G+ RM+ GK P + AKNRR
Sbjct: 150 TDSVGSDAVNQRLSEERASAVAQYLTAQGVQRERMETMGAGKRYPIADNTTDAGRAKNRR 209
Query: 149 AIVFLKGCRA 158
+ L RA
Sbjct: 210 VEIRLIPLRA 219
>gi|294787848|ref|ZP_06753092.1| OmpA family protein [Simonsiella muelleri ATCC 29453]
gi|294484141|gb|EFG31824.1| OmpA family protein [Simonsiella muelleri ATCC 29453]
Length = 217
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHA 89
DT + Q ++ ++V F T Y + L+ L ++ I GH
Sbjct: 89 ADTGVEVQREGNQIKLTMPENVTFATGRYDLSVNAQNSLNGAAQTLATYNETTISIIGHT 148
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G+ + +I L RA AV Y +++G+S+SR+ +G P + A+NRR
Sbjct: 149 DSTGNDSINIPLSQNRANAVAQYLISKGVSSSRISTAGHGASQPIASNSTAEGRAQNRRV 208
Query: 150 IVFL 153
+ +
Sbjct: 209 EILI 212
>gi|237800227|ref|ZP_04588688.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|237806415|ref|ZP_04593119.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|331023084|gb|EGI03141.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
oryzae str. 1_6]
gi|331027528|gb|EGI07583.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 167
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 38/127 (29%), Positives = 71/127 (55%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL 84
++ + SL E+ + + +F+ S ++P ++ L L+ + +
Sbjct: 39 PNAGYGANSGAVDGSLSEEAALRAITTFYFEYDSSDLKPEAMRALDVHAKDLKANGARVV 98
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+EG+ DE G+R ++ALG RRA AV Y V +G+S +++++ SYG+E P G+DE ++A
Sbjct: 99 LEGNTDERGTREYNMALGERRAKAVQRYLVLQGVSPAQLELVSYGEERPVATGNDEQSWA 158
Query: 145 KNRRAIV 151
+NRR +
Sbjct: 159 QNRRVEL 165
>gi|34763583|ref|ZP_00144517.1| Outer membrane protein [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|27886747|gb|EAA23886.1| Outer membrane protein [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
Length = 157
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 32/123 (26%), Positives = 59/123 (47%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+LN + +E S+ FD +++P +L N+ ++E+++ + I GH D
Sbjct: 16 GDILNSEAPKEMTIVLDERSLHFDFDKSNVKPQYYDLLKNIQEFVEQNNYEITIVGHTDS 75
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAI 150
+GS + L RRA +V + G+S R+ + + G+E P ++ A+NRR
Sbjct: 76 IGSNAYNFKLSRRRAESVKAKLLEFGLSEDRIVGIEAMGEEQPIATNATKEGRAQNRRVE 135
Query: 151 VFL 153
L
Sbjct: 136 FKL 138
>gi|332879337|ref|ZP_08447034.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332682757|gb|EGJ55657.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 422
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 53/122 (43%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ ++ + + D++ FD +I+ L+ L + L + ++GH D
Sbjct: 299 NDMMQKGEPVAGKTICAIDAINFDFGKSTIKTESYAYLNRLANTLVRTHARIEVKGHTDN 358
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+G+ ++ L +RA AV +Y + RG+ ++ + YG P E+ NRR
Sbjct: 359 VGTEEFNMKLSHKRAQAVVDYLIGRGVDKDKLSYSYYGMSKPLTTNDTEEGRTMNRRVEF 418
Query: 152 FL 153
+
Sbjct: 419 EI 420
>gi|264677568|ref|YP_003277474.1| OmpA/MotB [Comamonas testosteroni CNB-2]
gi|262208080|gb|ACY32178.1| OmpA/MotB [Comamonas testosteroni CNB-2]
Length = 214
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FFD ++PA L +L ++ + + +I GH D +GS + L +R
Sbjct: 99 VTYSADAFFDFDKSVLKPAGKAKLDDLTGKIKDINLEVIIAVGHTDSIGSDAYNQKLSVR 158
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
RA AV Y V++GI SR+ GK+ P A+NRR + + G +A
Sbjct: 159 RAEAVKAYLVSKGIEKSRVYTEGKGKKQPVADNKTAAGRAQNRRVEIEVVGTKA 212
>gi|197105040|ref|YP_002130417.1| outer membrane protein [Phenylobacterium zucineum HLK1]
gi|196478460|gb|ACG77988.1| outer membrane protein [Phenylobacterium zucineum HLK1]
Length = 190
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 69/167 (41%), Gaps = 21/167 (12%)
Query: 8 IILSAITMMSISG-------IDNLDTKISSPDTVLNESSLQEQFSSSVG----------- 49
++L+ + + + + +DT+++ + E+ + + +
Sbjct: 22 LLLAGVAVSGCASHRFVRDQVAVVDTRVTGVEGTAGEALARANAAHKLAEGKFLYQVVLS 81
Query: 50 -DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--LIEGHADELGSRNSSIALGLRRA 106
DSV F +++ P L+ L L+ + + I+GH D G + LG RA
Sbjct: 82 DDSVKFPVDRHALSPEAEARLNELAERLKSENRNVYLEIQGHTDSTGPEAYNDQLGEARA 141
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV + G++ +RM SYG+E P + A+NRR + +
Sbjct: 142 EAVRKHLAKAGVALNRMGTISYGEEAPVASNDTAEGRAQNRRVEIIV 188
>gi|2251192|emb|CAA90573.1| outer membrane protein [Pseudomonas aeruginosa]
gi|162319694|gb|ABX84373.1| OprL [Pseudomonas aeruginosa]
Length = 168
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 40/139 (28%), Positives = 70/139 (50%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+ ++ + SL ++ + + +F+ S ++P ++ L
Sbjct: 29 ASGEGANGGVDPNAGYGANSGAVDGSLSDEAALRAITTFYFEYDSSDLKPEAMRALDVHA 88
Query: 74 SWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
L+ ++EGH DE G+R ++ALG RRA AV Y V +G+S + +++ SYGKE P
Sbjct: 89 KDLKGSGQRVVLEGHTDERGTREYNMALGERRAKAVQRYLVLQGVSPATLELVSYGKERP 148
Query: 134 SVYGHDEDAYAKNRRAIVF 152
GHDE ++A+NRR +
Sbjct: 149 VATGHDEQSWAQNRRVELK 167
>gi|194335385|ref|YP_002017179.1| peptidoglycan-associated lipoprotein [Pelodictyon
phaeoclathratiforme BU-1]
gi|194307862|gb|ACF42562.1| peptidoglycan-associated lipoprotein [Pelodictyon
phaeoclathratiforme BU-1]
Length = 154
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 2/153 (1%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ + + A+ + + + +GD +F+D
Sbjct: 1 MKSLMRSLFIPAMLFLGACCCGEDVVVAPAAAPPPPPPPPIQIILPGLGD-LFYDFDKSD 59
Query: 61 IRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
+R ++ L +W++ + +IEGH DE G+ ++ALG RRA + NY + GI
Sbjct: 60 LRADAVEQLKTNANWMQVFKNNSVIIEGHCDERGTNEYNLALGERRANSARNYTINLGID 119
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
R+K SYG+E P G E+A+A+NRRA
Sbjct: 120 PVRLKTVSYGEEKPFATGSTEEAWAQNRRAHFV 152
>gi|320158865|ref|YP_004191243.1| outer membrane protein A [Vibrio vulnificus MO6-24/O]
gi|319934177|gb|ADV89040.1| outer membrane protein A precursor [Vibrio vulnificus MO6-24/O]
Length = 357
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIAL 101
+FS+ + F T S + Q L+ L ++ D + I GH D GS + +
Sbjct: 233 KFSNQQYNQELFATGSSKLSAGGKQALTPLAEVLIKYPDAEAEIVGHTDSTGSEKVNQRI 292
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+RA AV +Y V +G+ A ++KV+ G+ P + A+NRR V +
Sbjct: 293 SEQRAQAVADYLVEQGVKAEQLKVSGAGESQPIASNKTAEGRAQNRRVEVTI 344
>gi|304391383|ref|ZP_07373325.1| inner membrane lipoprotein YiaD [Ahrensia sp. R2A130]
gi|303295612|gb|EFL89970.1| inner membrane lipoprotein YiaD [Ahrensia sp. R2A130]
Length = 219
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 56/125 (44%), Gaps = 1/125 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHA 89
+T ++ S + ++ ++ F++ S ++ +VL+++ L++++ + GH
Sbjct: 92 QNTGVSVSRVGNDIVLNMPSNITFNSGSADLKAQFFRVLNSVALVLKEYNKTLVNVSGHT 151
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GS + L RR V Y V +G + R V YG+E P +NRR
Sbjct: 152 DSDGSDQFNQQLSERRGVNVAQYLVQQGTDSRRYYVVGYGEERPIASNASAAGKEQNRRV 211
Query: 150 IVFLK 154
+ L
Sbjct: 212 EIRLS 216
>gi|302343856|ref|YP_003808385.1| peptidoglycan-associated lipoprotein [Desulfarculus baarsii DSM
2075]
gi|301640469|gb|ADK85791.1| peptidoglycan-associated lipoprotein [Desulfarculus baarsii DSM
2075]
Length = 179
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 25/179 (13%)
Query: 1 MQYSTIFIILSAI--TMMSISGIDNLDTKISSPDTVLNES-------------------- 38
M+ IF +++A+ +M ++G + ++
Sbjct: 1 MKKFAIFAMVAALCFSMAMVAGCSKQKVAGPGELSAEEQARLAAERERRLREARLAEEQA 60
Query: 39 --SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
Q V FD Y + Q+L++ + + + ++EGH DE GS
Sbjct: 61 RGGEQTMREIFENQDVHFDYDRYDLSAEAKQILNDKAQFLSQHPEVTVIVEGHCDERGSN 120
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ ++ALG +RA A Y +A G+++ R++V SYG+E P V G+ E+AYA NRR +K
Sbjct: 121 SYNMALGEKRARACEQYLMAMGVASDRLEVVSYGEERPLVPGNTEEAYAANRRGHFVIK 179
>gi|229592075|ref|YP_002874194.1| hypothetical protein PFLU4673 [Pseudomonas fluorescens SBW25]
gi|229363941|emb|CAY51462.1| putative outer membrane protein [Pseudomonas fluorescens SBW25]
Length = 271
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 57/140 (40%), Gaps = 2/140 (1%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ + L + ++GD V FDT ++ + + + + +L+ +
Sbjct: 127 SVQQQGKWLEEQIASLATTQTDRGLVMTLGD-VLFDTGEAELKNSANRTVLKIVQFLQLN 185
Query: 80 DCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ IEG+AD G ++ L RA +V + V GI R++V YG + P
Sbjct: 186 PKRVVRIEGYADNTGGERENLKLSRDRAQSVADVLVDLGIDEKRIQVEGYGDQYPVEANA 245
Query: 139 DEDAYAKNRRAIVFLKGCRA 158
E A+NRR + +
Sbjct: 246 SERGRAQNRRVEIVFSDAKG 265
>gi|229528782|ref|ZP_04418172.1| outer membrane protein A precursor [Vibrio cholerae 12129(1)]
gi|229332556|gb|EEN98042.1| outer membrane protein A precursor [Vibrio cholerae 12129(1)]
gi|327484732|gb|AEA79139.1| Outer membrane protein A precursor [Vibrio cholerae LMA3894-4]
Length = 321
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
DS F T+S ++PA +Q L + + + + GH D GS + L RRA A
Sbjct: 208 DSSTFATASAELKPATVQKLDKIVGYLNQYPQAKVEVVGHTDSTGSEAYNQKLSERRAQA 267
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V A+GI ASR+ G+ P + KNRR + +
Sbjct: 268 VAKALEAQGIDASRISAKGLGESSPIASNATAEGREKNRRVELVI 312
>gi|254286478|ref|ZP_04961435.1| outer membrane protein OmpA [Vibrio cholerae AM-19226]
gi|150423427|gb|EDN15371.1| outer membrane protein OmpA [Vibrio cholerae AM-19226]
Length = 321
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
DS F T+S ++PA +Q L + + + + GH D GS + L RRA A
Sbjct: 208 DSSTFATASAELKPATVQKLDKIVGYLNQYPQAKVEVVGHTDSTGSEAYNQKLSERRAQA 267
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V A+GI ASR+ G+ P + KNRR + +
Sbjct: 268 VAKALEAQGIDASRISAKGLGESSPIASNATAEGREKNRRVELVI 312
>gi|260431631|ref|ZP_05785602.1| OmpA domain protein [Silicibacter lacuscaerulensis ITI-1157]
gi|260415459|gb|EEX08718.1| OmpA domain protein [Silicibacter lacuscaerulensis ITI-1157]
Length = 643
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 52/139 (37%), Gaps = 4/139 (2%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
+SI+ + + PD E+ + E G + F+ S ++ L+ +
Sbjct: 464 LSITYQPVPEPAETRPDPDACEARIVE---VQSGGKITFEPGSATVSADSRDSLNQIAEI 520
Query: 76 LEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
L + I+GH D G + L RA ++ N AR + S YG+ P
Sbjct: 521 LRECGPIRMEIQGHTDSQGREEMNQQLSQARAQSILNELRARRVPTSSFSAVGYGETQPI 580
Query: 135 VYGHDEDAYAKNRRAIVFL 153
E+ +NRR L
Sbjct: 581 ADNGTEEGREENRRIEFRL 599
>gi|238920737|ref|YP_002934252.1| peptidoglycan-associated outer membrane lipoprotein [Edwardsiella
ictaluri 93-146]
gi|238870306|gb|ACR70017.1| peptidoglycan-associated lipoprotein, putative [Edwardsiella
ictaluri 93-146]
Length = 170
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDT------------VLNESSLQEQF 44
MQ + + ++L + + + S N + S +E + +
Sbjct: 1 MQLNKVLKGLMLVLPIMAVAACSSKKNTNDDQSGMGMGAKGMENSSSNLSSDEQARLQMQ 60
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGL 103
+ V+F Y + P +Q L ++L + +EGH DE G+ +IALG
Sbjct: 61 ELQKNNIVYFGLDKYDVTPDYMQELDAHAAFLRSNPSYKVTVEGHTDERGTPEYNIALGE 120
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
RRA AV Y +G+SA ++ + SYGKE P+V GHDE AYAKNRRA++
Sbjct: 121 RRANAVKMYLQGKGVSADQIDIVSYGKEKPAVLGHDEAAYAKNRRAVLV 169
>gi|163754618|ref|ZP_02161740.1| phosphoglycerate kinase [Kordia algicida OT-1]
gi|161325559|gb|EDP96886.1| phosphoglycerate kinase [Kordia algicida OT-1]
Length = 457
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 60/137 (43%), Gaps = 7/137 (5%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
++G+ D P E + + + +V+F++ S + ++L+ + ++
Sbjct: 324 VAGVAENDGCPPIPRMTEIEITELDNLA----RTVYFNSGKDSFKQETYEILNKIVELIK 379
Query: 78 KHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ F I GH D +GS + + L +RA AV +Y ++ +++ YG+ P
Sbjct: 380 GFPAEEFTIGGHTDSVGSDSLNQKLSEKRANAVKSYLESKL--SNKFTAIGYGENEPIAS 437
Query: 137 GHDEDAYAKNRRAIVFL 153
A+NRR + L
Sbjct: 438 NRTRKGRAQNRRVEIKL 454
>gi|153007835|ref|YP_001369050.1| OmpA/MotB domain-containing protein [Ochrobactrum anthropi ATCC
49188]
gi|151559723|gb|ABS13221.1| OmpA/MotB domain protein [Ochrobactrum anthropi ATCC 49188]
Length = 200
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 53/140 (37%), Gaps = 6/140 (4%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
G+ +I + ++ SV V FD S + L+++ LE
Sbjct: 58 GLSGAAQEIVEKSGNITMRETEDSIVLSVTSDVLFDFDSAKLTGKAKATLTDIAKILESM 117
Query: 80 DCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG- 137
+ G+ D G+ + + L RA AV + V G+ ++R+K G+ P
Sbjct: 118 PDSAVRVVGYTDSKGADSYNDKLSKSRADAVTKFLVNNGVQSARLKPEGRGESEPVAPNE 177
Query: 138 ----HDEDAYAKNRRAIVFL 153
+ D A+NRR L
Sbjct: 178 IKGKDNPDGRAQNRRVEFVL 197
>gi|326801229|ref|YP_004319048.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
gi|326551993|gb|ADZ80378.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
Length = 177
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 35/176 (19%), Positives = 62/176 (35%), Gaps = 22/176 (12%)
Query: 1 MQYST---IFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD------- 50
M I+L+ M + + ++ + + ++
Sbjct: 1 MNIKKTYPFVILLAVFVSMQACKSKKMAVQPNAVVETVKKEEPVKEKEPEPAPVEEKEEE 60
Query: 51 -----------SVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSS 98
++ F+ S ++ A VL + ++K F I GHA GS +
Sbjct: 61 PVVEKPNYNFKNILFEFDSGVLKTASYSVLDQIVREMKKDPSVKFTINGHASLEGSAEHN 120
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+AL + RA AV Y V GIS + +G P E+ ++NRR + L
Sbjct: 121 MALSVDRANAVKLYLVNAGISPDNLTAQGFGATKPVATNETEEGRSQNRRVEIKLS 176
>gi|224812457|gb|ACN64871.1| OmpA family lipoprotein [Burkholderia pseudomallei]
Length = 177
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 15/167 (8%)
Query: 1 MQYSTIFIILSAITMMSISGIDNL----------DTKISSPDTVLNESSLQEQFSSS--- 47
M + + + + + +++ + D + P+ + +
Sbjct: 8 MMSKKLRLAFAMLMIGALAACKSGVKLDEHANQGDAVSTQPNPENVAQVTVDPLNDPNSP 67
Query: 48 -VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRR 105
SV+FD SYS++ +L +L+ H LI+G+ DE G+ ++ALG +R
Sbjct: 68 LAKRSVYFDFDSYSVQDQYQALLQQHAQYLKSHPQRHILIQGNTDERGTSEYNLALGQKR 127
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
A AV G+ ++M+ S GKE P GHDE ++A+NRRA +
Sbjct: 128 AEAVRRALSLLGVGDAQMEAVSLGKEKPVALGHDEASWAQNRRADLV 174
>gi|15642211|ref|NP_231844.1| outer membrane protein OmpA [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121586239|ref|ZP_01676029.1| outer membrane protein OmpA [Vibrio cholerae 2740-80]
gi|121726579|ref|ZP_01679828.1| outer membrane protein OmpA [Vibrio cholerae V52]
gi|147673624|ref|YP_001217730.1| outer membrane protein OmpA [Vibrio cholerae O395]
gi|153817076|ref|ZP_01969743.1| outer membrane protein OmpA [Vibrio cholerae NCTC 8457]
gi|153820798|ref|ZP_01973465.1| outer membrane protein OmpA [Vibrio cholerae B33]
gi|153825329|ref|ZP_01977996.1| outer membrane protein OmpA [Vibrio cholerae MZO-2]
gi|153829325|ref|ZP_01981992.1| outer membrane protein OmpA [Vibrio cholerae 623-39]
gi|227082337|ref|YP_002810888.1| outer membrane protein OmpA [Vibrio cholerae M66-2]
gi|229507710|ref|ZP_04397215.1| outer membrane protein A precursor [Vibrio cholerae BX 330286]
gi|229512095|ref|ZP_04401574.1| outer membrane protein A precursor [Vibrio cholerae B33]
gi|229519230|ref|ZP_04408673.1| outer membrane protein A precursor [Vibrio cholerae RC9]
gi|229607214|ref|YP_002877862.1| outer membrane protein A precursor [Vibrio cholerae MJ-1236]
gi|254225790|ref|ZP_04919395.1| outer membrane protein OmpA [Vibrio cholerae V51]
gi|254849343|ref|ZP_05238693.1| outer membrane protein OmpA [Vibrio cholerae MO10]
gi|255747088|ref|ZP_05421033.1| outer membrane protein A precursor [Vibrio cholera CIRS 101]
gi|262161368|ref|ZP_06030478.1| outer membrane protein A precursor [Vibrio cholerae INDRE 91/1]
gi|262167761|ref|ZP_06035463.1| outer membrane protein A precursor [Vibrio cholerae RC27]
gi|298500409|ref|ZP_07010214.1| outer membrane protein OmpA [Vibrio cholerae MAK 757]
gi|2641145|gb|AAB86826.1| putative outer membrane porin [Vibrio cholerae O395]
gi|9656770|gb|AAF95357.1| outer membrane protein OmpA [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121549505|gb|EAX59531.1| outer membrane protein OmpA [Vibrio cholerae 2740-80]
gi|121631032|gb|EAX63411.1| outer membrane protein OmpA [Vibrio cholerae V52]
gi|125621696|gb|EAZ50025.1| outer membrane protein OmpA [Vibrio cholerae V51]
gi|126512344|gb|EAZ74938.1| outer membrane protein OmpA [Vibrio cholerae NCTC 8457]
gi|126521590|gb|EAZ78813.1| outer membrane protein OmpA [Vibrio cholerae B33]
gi|146315507|gb|ABQ20046.1| outer membrane protein OmpA [Vibrio cholerae O395]
gi|148875166|gb|EDL73301.1| outer membrane protein OmpA [Vibrio cholerae 623-39]
gi|149741013|gb|EDM55082.1| outer membrane protein OmpA [Vibrio cholerae MZO-2]
gi|227010225|gb|ACP06437.1| outer membrane protein OmpA [Vibrio cholerae M66-2]
gi|227014109|gb|ACP10319.1| outer membrane protein OmpA [Vibrio cholerae O395]
gi|229343919|gb|EEO08894.1| outer membrane protein A precursor [Vibrio cholerae RC9]
gi|229352060|gb|EEO17001.1| outer membrane protein A precursor [Vibrio cholerae B33]
gi|229355215|gb|EEO20136.1| outer membrane protein A precursor [Vibrio cholerae BX 330286]
gi|229369869|gb|ACQ60292.1| outer membrane protein A precursor [Vibrio cholerae MJ-1236]
gi|254845048|gb|EET23462.1| outer membrane protein OmpA [Vibrio cholerae MO10]
gi|255735490|gb|EET90890.1| outer membrane protein A precursor [Vibrio cholera CIRS 101]
gi|262023826|gb|EEY42525.1| outer membrane protein A precursor [Vibrio cholerae RC27]
gi|262028679|gb|EEY47333.1| outer membrane protein A precursor [Vibrio cholerae INDRE 91/1]
gi|297541102|gb|EFH77156.1| outer membrane protein OmpA [Vibrio cholerae MAK 757]
Length = 321
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
DS F T+S ++PA +Q L + + + + GH D GS + L RRA A
Sbjct: 208 DSSTFATASAELKPATVQKLDKIVGYLNQYPQAKVEVVGHTDSTGSEAYNQKLSERRAQA 267
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V A+GI ASR+ G+ P + KNRR + +
Sbjct: 268 VAKALEAQGIDASRISAKGLGESSPIASNATAEGREKNRRVELVI 312
>gi|302187874|ref|ZP_07264547.1| ompA family protein [Pseudomonas syringae pv. syringae 642]
Length = 260
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 2/140 (1%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW- 75
+ + ++ D +I++ LN + + GD V FD + ++P + L +
Sbjct: 110 AKARLEARDAQIAALKNSLNAKQTERGTLVTFGD-VLFDYNKAELKPTAQGDIGKLAGFL 168
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
E D ++EG+ D GS + + +L RRA +V V G+ +R+ YGKE P
Sbjct: 169 QENPDRKVIVEGYTDSTGSASYNQSLSERRADSVRMALVRMGVDPARIVTMGYGKEYPVA 228
Query: 136 YGHDEDAYAKNRRAIVFLKG 155
A NRR V +
Sbjct: 229 DNSSNSGRAMNRRVEVTISN 248
>gi|262373433|ref|ZP_06066711.1| peptidoglycan-associated lipoprotein [Acinetobacter junii SH205]
gi|262311186|gb|EEY92272.1| peptidoglycan-associated lipoprotein [Acinetobacter junii SH205]
Length = 159
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 33/157 (21%), Positives = 65/157 (41%), Gaps = 4/157 (2%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESS---LQEQFSSSVGDSVFFDTS 57
M+ TI I A+ ++++G + +L + +E +S + + + FD +
Sbjct: 1 MRAQTIKISFIALLCLTLAGCLSFGPLKYRQVKMLKKEGFVLTEEGWSLGLPERLLFDFN 60
Query: 58 SYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
I+P + + + L + I GH D++G+ + L RA +V F+
Sbjct: 61 KSDIKPENGKEIIRLAKQLNKYDLQKLKIVGHTDDIGNPEYNQKLSEERAQSVAGIFLNE 120
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G + + V G P V ++ A NRR + +
Sbjct: 121 GFKQTNLNVIGRGSNQPFVPNTSDENRASNRRVAIII 157
>gi|295675611|ref|YP_003604135.1| peptidoglycan-associated lipoprotein [Burkholderia sp. CCGE1002]
gi|295435454|gb|ADG14624.1| peptidoglycan-associated lipoprotein [Burkholderia sp. CCGE1002]
Length = 168
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 11/161 (6%)
Query: 2 QYSTIFIILSAITMMSI---------SGIDNLDTKISSPD-TVLNESSLQEQFSSSVGDS 51
+ F ++ + + +G + + D +N L + S S
Sbjct: 4 KLRFAFAVVMVGALAACHSGVKLDENAGKGAGSGQPNPNDVATVNVDPLNDPNSPLAKRS 63
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVF 110
++FD SYS++ +L +L+ H LI+G+ DE G+ ++ALG +RA AV
Sbjct: 64 IYFDFDSYSVKDDYQPLLQQHAQYLKGHPQRHVLIQGNTDERGTSEYNLALGQKRAEAVR 123
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
G+S S+M+ S GKE P GHDE ++A+NRRA +
Sbjct: 124 RSLSLMGVSDSQMEAVSLGKEKPLATGHDEASWAQNRRADL 164
>gi|146281506|ref|YP_001171659.1| OmpA family protein [Pseudomonas stutzeri A1501]
gi|145569711|gb|ABP78817.1| OmpA family protein [Pseudomonas stutzeri A1501]
gi|327479683|gb|AEA82993.1| OmpA family protein [Pseudomonas stutzeri DSM 4166]
Length = 217
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 56/135 (41%), Gaps = 1/135 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
+ + T + + + + ++ F ++S I + L++L ++ +
Sbjct: 81 TQEAKLRQTLQGTGVQVQRNGDNLTLIMPGNITFASNSADISSSFYPTLNSLVQVFKEFN 140
Query: 81 CD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ I GH D GS + L RRA +V +Y +A G++ +R+ G P
Sbjct: 141 KNGVDIVGHTDSTGSLQLNQDLSNRRAQSVASYLIANGVAPARISSYGAGPSQPIASNDT 200
Query: 140 EDAYAKNRRAIVFLK 154
A+NRR + L+
Sbjct: 201 AAGRAQNRRVEINLR 215
>gi|315179386|gb|ADT86300.1| outer membrane protein OmpA [Vibrio furnissii NCTC 11218]
Length = 332
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 45/132 (34%), Gaps = 1/132 (0%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDC 81
++ + + + DS F +S + L + + E
Sbjct: 192 VVEQAPVQEPVAAEPKMVTKTVAFQKLDSKSFAHNSAKMSEEGKAQLGDLVAFLNEHPQA 251
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
+ I GH D G+ + L +RA V + +GI A+R+ G+ P
Sbjct: 252 NVEITGHTDSTGAEAYNQKLSEKRAQGVSDALQEKGIDAARITAKGEGESNPIASNATAA 311
Query: 142 AYAKNRRAIVFL 153
+NRR + +
Sbjct: 312 GREQNRRVEIVI 323
>gi|268679162|ref|YP_003303593.1| OmpA/MotB domain protein [Sulfurospirillum deleyianum DSM 6946]
gi|268617193|gb|ACZ11558.1| OmpA/MotB domain protein [Sulfurospirillum deleyianum DSM 6946]
Length = 166
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 79/162 (48%), Gaps = 13/162 (8%)
Query: 5 TIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD----------SVFF 54
+ + A+ ++ ++G ++ + + S + S++ +++F
Sbjct: 3 KLALTSLAVAVLVLTGCSQKSPEVDMTKSTADTQSSVDDGMSALQKLIASLEANSKTIYF 62
Query: 55 DTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGLRRAYAVFN 111
D Y++R + + + +EG+ DE G+ + ALGL+RA +V +
Sbjct: 63 DFDKYNVRKDQQTNIDANAALFNSAEAKNFSIKVEGNCDEFGTDEYNYALGLKRAKSVKD 122
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
VA+G++A R+ V SYG+ P+V H++DA+AKNRRA +
Sbjct: 123 GLVAKGMNADRLTVVSYGESNPAVNEHNKDAWAKNRRAEFKV 164
>gi|255594982|ref|XP_002536202.1| conserved hypothetical protein [Ricinus communis]
gi|223520472|gb|EEF26178.1| conserved hypothetical protein [Ricinus communis]
Length = 113
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 52/105 (49%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
V F+ + S+RP ++ + L + ++EGH D +G+R + L RA +V N
Sbjct: 1 VLFNFNESSLRPDAGPAIARVVVVLSRTQKPMIVEGHTDNVGTREYNQQLSEARAKSVAN 60
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
RGISASR+ + Y + P + A+NRR + +KG
Sbjct: 61 ELERRGISASRITLVGYAFDRPVADNDTPEGRARNRRTEIVVKGE 105
>gi|217979014|ref|YP_002363161.1| type VI secretion system OmpA/MotB family protein [Methylocella
silvestris BL2]
gi|217504390|gb|ACK51799.1| type VI secretion system OmpA/MotB family protein [Methylocella
silvestris BL2]
Length = 493
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 41/131 (31%), Gaps = 4/131 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ L+ + Q + D F ++ ++ + L+ +
Sbjct: 359 APNIQSGALSVDATANQIVIRIIDRALFQPGKSTMLDDVKPLMMYIAMALDDDRGAVKVI 418
Query: 87 GHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
GH+D S+ L L RA V R++ G + P +
Sbjct: 419 GHSDNTPISNARFASNFELSLERANVVGALLKQSLSHPERVETEGKGADAPIAPNDTPEG 478
Query: 143 YAKNRRAIVFL 153
AKNRR + +
Sbjct: 479 RAKNRRVEIVV 489
>gi|154247009|ref|YP_001417967.1| peptidoglycan-associated lipoprotein [Xanthobacter autotrophicus
Py2]
gi|154161094|gb|ABS68310.1| Peptidoglycan-associated lipoprotein [Xanthobacter autotrophicus
Py2]
Length = 164
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 51/159 (32%), Positives = 80/159 (50%), Gaps = 6/159 (3%)
Query: 1 MQYSTI-----FIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFD 55
M++ + F L + + +N + + ++F +VGD VFF+
Sbjct: 1 MRFLRLARGFRFAALFGFALALAACANNPNQNAAGAGGAGGPPGSPQEFVVAVGDRVFFE 60
Query: 56 TSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
+ + P L WL++ + F IEGHADE G+R +IALG +RA +V +Y
Sbjct: 61 SDQTDLTPQARATLDRQAQWLQQWNRYTFTIEGHADERGTREYNIALGAKRAQSVRDYLA 120
Query: 115 ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
ARGI +RM+ SYGKE P +D +++NRRA+ L
Sbjct: 121 ARGIDPARMRTISYGKERPVAVCNDISCWSQNRRAVTVL 159
>gi|332283607|ref|YP_004415518.1| hypothetical protein PT7_0354 [Pusillimonas sp. T7-7]
gi|330427560|gb|AEC18894.1| hypothetical protein PT7_0354 [Pusillimonas sp. T7-7]
Length = 443
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 40/105 (38%), Gaps = 4/105 (3%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSIALGLRRAYA 108
F + S +R I VLS + L + L+ G++D + S+ L RA A
Sbjct: 320 LFTSGSDELRSEYIPVLSRVADALNQSRGSILVSGYSDNVPIRTVRFPSNWELSQARADA 379
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V R R++ G P + A+NRR + L
Sbjct: 380 VKALLQDRLTQPERVRAEGRGDANPVAPNNTPANRARNRRVEITL 424
>gi|325272915|ref|ZP_08139241.1| OmpA/MotB domain protein [Pseudomonas sp. TJI-51]
gi|324101950|gb|EGB99470.1| OmpA/MotB domain protein [Pseudomonas sp. TJI-51]
Length = 145
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHA 89
+T + +Q + ++ F T S +I P+ Q L+NL S + + + + G
Sbjct: 3 ANTGVEVQRQGDQIKLIMPGNITFATDSANIAPSFYQPLNNLASSFKQFNQNTIEVVGFT 62
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GSR ++ L RRA AV Y ++G+ +SR+ V G + P D + A+NRR
Sbjct: 63 DSTGSRQHNMDLSQRRAQAVSTYLTSQGVDSSRLSVRGMGPDQPIASNADANGRAQNRRV 122
Query: 150 IVFLK 154
V LK
Sbjct: 123 EVNLK 127
>gi|312793260|ref|YP_004026183.1| OmpA/MotB domain-containing protein [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312180400|gb|ADQ40570.1| OmpA/MotB domain protein [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 257
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 45/121 (37%), Gaps = 7/121 (5%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR-- 95
+ S + D V FDT S + P +V+ + + + + IEGH D +
Sbjct: 126 QEERGLSILLKD-VLFDTGSAKLTPQAKEVVHEIAKILEKVPNNNIRIEGHTDNVPIHNK 184
Query: 96 --NSSIALGLRRAYAV-FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
S+ L RA +V + R V YG+ P + A NRR +
Sbjct: 185 YFYSNWELSTARATSVLQEILRVSKVRPERFSVVGYGEYRPIASNKTPEGRALNRRVTIV 244
Query: 153 L 153
+
Sbjct: 245 I 245
>gi|146282902|ref|YP_001173055.1| flagellar motor protein MotD [Pseudomonas stutzeri A1501]
gi|145571107|gb|ABP80213.1| flagellar motor protein MotB [Pseudomonas stutzeri A1501]
Length = 278
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 44/115 (38%), Gaps = 4/115 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ S+ F + Q++ + L D +EG D L ++
Sbjct: 128 IEIELSSSLLFPSGDALPNDQAFQLIDKVAGILAPFDNPVHVEGFTDNLPISTDKFPTNW 187
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L RA +V A+G++ SR+ YG+ P + A+NRR ++ +
Sbjct: 188 ELSAARAGSVVRMLAAQGVNPSRLAAVGYGEFQPVADNATAEGRARNRRVVLVVS 242
>gi|293392950|ref|ZP_06637267.1| OmpA family protein [Serratia odorifera DSM 4582]
gi|291424484|gb|EFE97696.1| OmpA family protein [Serratia odorifera DSM 4582]
Length = 165
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 31/153 (20%), Positives = 63/153 (41%), Gaps = 5/153 (3%)
Query: 6 IFIILSAITMMSISGIDNLDTKISSPDTVLNESS----LQEQFSSSVGDSVFFDTSSYSI 61
+ + I +++++G + +++ L ++ + + D V F + +
Sbjct: 11 ALLAMMFIAVLALAGCQSKPQGLTAEQVALLQAQGFKLTDNGWEFGMSDKVLFGNNIGKL 70
Query: 62 RPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA 120
PA + + +G L F ++GH D G + + L LRRA AV + + GI
Sbjct: 71 NPASTETVQKMGRALLSVDIVKFRLDGHTDNYGEDSYNDRLSLRRANAVADLLASVGIPR 130
Query: 121 SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ ++ GK P A+NRR + +
Sbjct: 131 ANIETRGRGKRDPVADNRTASGRAENRRVSIIV 163
>gi|237740687|ref|ZP_04571168.1| outer membrane protein [Fusobacterium sp. 2_1_31]
gi|229422704|gb|EEO37751.1| outer membrane protein [Fusobacterium sp. 2_1_31]
Length = 212
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
T + ++ V F + S +I L+ + + + + G+ D
Sbjct: 86 GTQAEVRNDGNALVVNLPGGVTFASDSANISSGFYSALNGVAQTLVRYPETRIQVNGYTD 145
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + L RRA +V Y +++G+S+SR+ +G P + NRR
Sbjct: 146 STGGDAHNQELSQRRANSVAQYLISQGVSSSRIVANGFGSSNPIASNATPEGRQANRRVE 205
Query: 151 VFL 153
V +
Sbjct: 206 VRI 208
>gi|294782159|ref|ZP_06747485.1| OmpA family protein [Fusobacterium sp. 1_1_41FAA]
gi|294480800|gb|EFG28575.1| OmpA family protein [Fusobacterium sp. 1_1_41FAA]
Length = 212
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 50/133 (37%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
+ K + T + ++ V F + S +I L+ + + +
Sbjct: 76 QARELKAALKGTQAEVRNDGNALVVNLPGGVTFASDSANISSGFYSALNGVAQTLVRYPE 135
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ G+ D G + L RRA +V Y +++G+S++R+ +G P
Sbjct: 136 TRIQVNGYTDSTGGDAHNQELSQRRANSVAQYLISQGVSSNRIVANGFGSLNPIASNATP 195
Query: 141 DAYAKNRRAIVFL 153
+ NRR V +
Sbjct: 196 EGRQANRRVEVRI 208
>gi|262068012|ref|ZP_06027624.1| OmpA family protein [Fusobacterium periodonticum ATCC 33693]
gi|291378280|gb|EFE85798.1| OmpA family protein [Fusobacterium periodonticum ATCC 33693]
Length = 212
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 53/133 (39%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
+ K + T + ++ V F + S +I L+ + ++ +
Sbjct: 76 QARELKAALKGTQAEVRNDGNALVVNLPGGVTFASDSANISSGFYSALNGVAQTLVKYPE 135
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ G+ D G ++ L RRA AV YF+A+G+S++R+ +G P
Sbjct: 136 TRIQVNGYTDSTGGDAHNLDLSQRRANAVAQYFIAQGVSSNRIVANGFGSSNPIASNATP 195
Query: 141 DAYAKNRRAIVFL 153
+ NRR V +
Sbjct: 196 EGRQANRRVEVRI 208
>gi|257092877|ref|YP_003166518.1| OmpA/MotB domain-containing protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257045401|gb|ACV34589.1| OmpA/MotB domain protein [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 189
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 27/184 (14%), Positives = 58/184 (31%), Gaps = 30/184 (16%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNE----------------------S 38
M +F +L ++ + ++ DT+ +
Sbjct: 1 MNARIVFPLLLVASLSACVSQSTYKQEVQQVDTLSVQNKAYAQLTQQLQTEIQADQVKIK 60
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGS--- 94
L+ + + ++ D + F + S + + + ++EG+ D
Sbjct: 61 QLEGRLTVTLVDEIVFSSGSAEMNMKGRATIDKIVGTLQNAAGKRIVVEGYTDNTPIGPG 120
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
++ L RA V Y A GI R++ +G+ P ++NRR
Sbjct: 121 LRSRYPTNWELSTARACDVVRYLQAAGIDPVRLEAAGFGEYQPVAANDTPAGRSQNRRID 180
Query: 151 VFLK 154
+ L
Sbjct: 181 IVLM 184
>gi|227823307|ref|YP_002827279.1| putative outer membrane lipoprotein Omp16-like protein precursor
[Sinorhizobium fredii NGR234]
gi|227342308|gb|ACP26526.1| putative outer membrane lipoprotein Omp16-like protein precursor
[Sinorhizobium fredii NGR234]
Length = 176
Score = 84.5 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 51/155 (32%), Positives = 80/155 (51%), Gaps = 6/155 (3%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTVLN-----ESSLQEQFSSSVGDSVFFDTSSYSIR 62
++L+ + ++++G + + + Q+ F+ +VGD +FFDT S SIR
Sbjct: 20 VMLALVMTLAVAGCASKKNLPNDAAGLGLGAGAATPGSQQDFTVNVGDRIFFDTDSSSIR 79
Query: 63 PADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS 121
L+ W + + IEGHADE G+R ++ALG RRA A Y +G+ A+
Sbjct: 80 ADAQATLARQAQWLAKYPNYAITIEGHADERGTREYNLALGARRAAATREYLAGQGVPAN 139
Query: 122 RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
RM+ SYGKE P D +++NRRA+ L G
Sbjct: 140 RMRTISYGKEKPVAVCDDISCWSQNRRAVTVLGGA 174
>gi|330898192|gb|EGH29611.1| outer membrane porin OprF [Pseudomonas syringae pv. japonica str.
M301072PT]
Length = 344
Score = 84.5 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 56/138 (40%), Gaps = 4/138 (2%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD ++P + NL ++++
Sbjct: 203 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMQQ 262
Query: 79 H-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVY 136
+ +EGH D +G + L RRA AV V + ASR+ YG+ P
Sbjct: 263 YPQTTTTVEGHTDSVGPDAYNQKLSERRANAVKQVLVNQYGVGASRVNSVGYGESKPVAD 322
Query: 137 GHDEDAYAKNRRAIVFLK 154
E A NRR ++
Sbjct: 323 NATEAGRAVNRRVEAEVE 340
>gi|330817987|ref|YP_004361692.1| OmpA family protein [Burkholderia gladioli BSR3]
gi|327370380|gb|AEA61736.1| OmpA family protein [Burkholderia gladioli BSR3]
Length = 216
Score = 84.5 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 52/136 (38%), Gaps = 1/136 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
I N + +V SV F T Y+I PA +L++L S +
Sbjct: 74 AIKNRLAPSAQKTGTQVTEQPDGSLKLNVPSSVTFATDQYAITPAFAPLLNDLASTLNQN 133
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ G+ D GS + L RA +V V RG++ R+ G P
Sbjct: 134 PQITASVVGYTDSTGSAAHNQTLSQNRAQSVVTALVQRGVAGGRLGAQGMGASNPVADNA 193
Query: 139 DEDAYAKNRRAIVFLK 154
E A+NRR ++L+
Sbjct: 194 TEAGRAQNRRVEIYLR 209
>gi|77457293|ref|YP_346798.1| OmpA/MotB [Pseudomonas fluorescens Pf0-1]
gi|77381296|gb|ABA72809.1| putative lipoprotein [Pseudomonas fluorescens Pf0-1]
Length = 264
Score = 84.5 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 37/135 (27%), Positives = 58/135 (42%), Gaps = 2/135 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
D D +I LN + GD V F T+ ++ + + ++ L + E D
Sbjct: 115 DARDQQIKQLQDSLNAKQTDRGTLVTFGD-VLFATNKADLKSSGLVNINKLAQFLQENPD 173
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++EG+ D GS + + +L RRA +V + G+ SR+ V YGKE P
Sbjct: 174 RKVIVEGYTDSTGSASYNQSLSERRATSVQVALIKMGVDPSRIVVQGYGKEYPVADNGSV 233
Query: 141 DAYAKNRRAIVFLKG 155
A NRR V +
Sbjct: 234 SGRAMNRRVEVTISN 248
>gi|325286304|ref|YP_004262094.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
gi|324321758|gb|ADY29223.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
Length = 372
Score = 84.5 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 48/130 (36%), Gaps = 1/130 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+ E V + F + SY I L L + I GH+D
Sbjct: 232 QVSVVEDEGINLDEIYVIKDLLFTSDSYVINKEAKGQLRELVRHLKRNPRLNVTIYGHSD 291
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + L L RA +V + + G++ R+K YG E+P + E KNRR
Sbjct: 292 NEGDAKYNKLLSLNRAKSVGEFLLDNGLTFDRIKWQGYGDEIPLATNNSETGRLKNRRVE 351
Query: 151 VFLKGCRANT 160
+ + NT
Sbjct: 352 FVVSESKYNT 361
>gi|261343491|ref|ZP_05971136.1| peptidoglycan-associated lipoprotein [Providencia rustigianii DSM
4541]
gi|282568637|gb|EFB74172.1| peptidoglycan-associated lipoprotein [Providencia rustigianii DSM
4541]
Length = 165
Score = 84.5 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 12/163 (7%)
Query: 1 MQYSTIF----IILSAITMMSISG-----IDNLDTKISSPDTVLNESSLQEQFSSSV--G 49
MQ + + I L + + + S + D+ + +T L+ L Q +
Sbjct: 1 MQLNKVLKGLMIALPIMAVAACSSNKNNDQNGADSAVDQTNTGLSAEELARQQMEQLQQN 60
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYA 108
++V+F Y++ P ++L ++L + ++EGHADE G+ +IALG RRA A
Sbjct: 61 NTVYFGFDKYNVSPEYAEMLDAHAAFLRSNPSVRVVVEGHADERGTPEYNIALGERRANA 120
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
V Y ++G+S ++ + SYGKE P+V GH E YAKNRRA++
Sbjct: 121 VKMYLQSKGVSGDQVSLVSYGKEKPAVLGHTEADYAKNRRAVI 163
>gi|152983975|ref|YP_001346830.1| outer membrane protein [Pseudomonas aeruginosa PA7]
gi|150959133|gb|ABR81158.1| probable outer membrane protein [Pseudomonas aeruginosa PA7]
Length = 261
Score = 84.5 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 61/145 (42%), Gaps = 2/145 (1%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
A + + +D ++ + LN + GD V FD ++P ++ +
Sbjct: 105 ASAQRAQARLDARTAQLDKLRSQLNAKQTSRGTMVTFGD-VLFDLDKSDLKPGAMRNIQQ 163
Query: 72 LGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
L + + + ++EG+ D GS N + L RRA +V ++RGIS R+ YGK
Sbjct: 164 LAEFLQQNPERQVIVEGYTDSTGSANYNQRLSERRADSVRMALLSRGISPERVATRGYGK 223
Query: 131 EMPSVYGHDEDAYAKNRRAIVFLKG 155
E P A NRR V +
Sbjct: 224 EYPVASNGTSSGRAMNRRVEVTISN 248
>gi|313497139|gb|ADR58505.1| OmpA/MotB domain-containing protein [Pseudomonas putida BIRD-1]
Length = 239
Score = 84.5 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 1/134 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG-SWLEKHD 80
+ + +T + +Q + ++ F T S +I P+ L+NL S+ + +
Sbjct: 89 QEAELRAQMANTGVEVQRQGDQIKLIMPGNITFATDSANIAPSFYSPLNNLAGSFKQFNQ 148
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ G D GSR ++ L RRA AV Y ++G+ ASR+ V G + P D
Sbjct: 149 NTIEVVGFTDSTGSRQHNMDLSQRRAQAVSTYLTSQGVDASRISVRGMGPDQPIASNADA 208
Query: 141 DAYAKNRRAIVFLK 154
+ A+NRR V LK
Sbjct: 209 NGRAQNRRVEVNLK 222
>gi|13470497|ref|NP_102066.1| hypothetical protein mlr0220 [Mesorhizobium loti MAFF303099]
gi|14021239|dbj|BAB47852.1| mlr0220 [Mesorhizobium loti MAFF303099]
Length = 216
Score = 84.5 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
T ++ + +Q ++ + F+ +++P VL+++ + + GH D
Sbjct: 90 GTGVSVTRSGDQIILNMPSDITFNVDQDAVKPGFYPVLNSVALVLKKFKQTTVDVFGHTD 149
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + L RRA AV NY +G+ R VT +GK P +NRR
Sbjct: 150 STGGDQHNFDLSQRRALAVANYLSGQGVDQRRFAVTGFGKTRPIASNATAAGREQNRRVE 209
Query: 151 VFLK 154
+ L
Sbjct: 210 IQLS 213
>gi|15598888|ref|NP_252382.1| Lipotoxon F, LptF [Pseudomonas aeruginosa PAO1]
gi|107103206|ref|ZP_01367124.1| hypothetical protein PaerPA_01004275 [Pseudomonas aeruginosa PACS2]
gi|116051689|ref|YP_789472.1| putative outer membrane protein, OmpA [Pseudomonas aeruginosa
UCBPP-PA14]
gi|218890031|ref|YP_002438895.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
LESB58]
gi|254236602|ref|ZP_04929925.1| hypothetical protein PACG_02605 [Pseudomonas aeruginosa C3719]
gi|254242387|ref|ZP_04935709.1| hypothetical protein PA2G_03131 [Pseudomonas aeruginosa 2192]
gi|296387801|ref|ZP_06877276.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
PAb1]
gi|313109098|ref|ZP_07795070.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
39016]
gi|9949856|gb|AAG07080.1|AE004788_10 Lipotoxon F, LptF [Pseudomonas aeruginosa PAO1]
gi|115586910|gb|ABJ12925.1| putative outer membrane protein, OmpA [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126168533|gb|EAZ54044.1| hypothetical protein PACG_02605 [Pseudomonas aeruginosa C3719]
gi|126195765|gb|EAZ59828.1| hypothetical protein PA2G_03131 [Pseudomonas aeruginosa 2192]
gi|218770254|emb|CAW26019.1| probable outer membrane protein precursor [Pseudomonas aeruginosa
LESB58]
gi|310881572|gb|EFQ40166.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
39016]
Length = 261
Score = 84.5 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 61/145 (42%), Gaps = 2/145 (1%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
A + + +D ++ + LN + GD V FD ++P ++ +
Sbjct: 105 ASAQRAQARLDARTAQLDKLRSQLNAKQTSRGTMVTFGD-VLFDLDKSDLKPGAMRNIQQ 163
Query: 72 LGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
L + + + ++EG+ D GS N + L RRA +V ++RGIS R+ YGK
Sbjct: 164 LAEFLQQNPERQVIVEGYTDSTGSANYNQRLSERRADSVRMALLSRGISPERVATRGYGK 223
Query: 131 EMPSVYGHDEDAYAKNRRAIVFLKG 155
E P A NRR V +
Sbjct: 224 EYPVASNGTSSGRAMNRRVEVTISN 248
>gi|327404889|ref|YP_004345727.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
16823]
gi|327320397|gb|AEA44889.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
Length = 688
Score = 84.5 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEK-HDCDFLIEGHADELGSRNSSIALGLRRAYA 108
++FFD + ++RP + L ++ I GH D GS + L +RA A
Sbjct: 581 RNIFFDVNKATLRPESNAEMERLVQLMKDVPRLKIEISGHTDNTGSATLNETLSQQRAEA 640
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
V Y V++GI+A+RM YG P + ED +NRR +KG
Sbjct: 641 VVAYLVSKGIAANRMIAKGYGSSQPIASNNSEDGKQQNRRTEFEIKGN 688
>gi|298368928|ref|ZP_06980246.1| OmpA family protein [Neisseria sp. oral taxon 014 str. F0314]
gi|298282931|gb|EFI24418.1| OmpA family protein [Neisseria sp. oral taxon 014 str. F0314]
Length = 216
Score = 84.5 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 55/146 (37%), Gaps = 8/146 (5%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
S + +++ + L+ + ++ V FD ++P + L + +
Sbjct: 68 SSAAAQGSSLTAQSSSLSGTETGFNIQINLSSDVLFDFDKAELKPEADRELQKAADIIRQ 127
Query: 79 H-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
LI G+ D G+ + L L RA AV N+F A+G+ + G P
Sbjct: 128 KGKGLILISGYTDSKGTDAYNKRLSLVRAQAVKNWFEAQGLH-QNYQTEGLGAANPVAPN 186
Query: 138 ------HDEDAYAKNRRAIVFLKGCR 157
+ + AKNRR + + +
Sbjct: 187 TNDDGSDNPEGRAKNRRVEIIVNKTK 212
>gi|158422149|ref|YP_001523441.1| OmpA/MotB precursor [Azorhizobium caulinodans ORS 571]
gi|158329038|dbj|BAF86523.1| OmpA/MotB precursor [Azorhizobium caulinodans ORS 571]
Length = 164
Score = 84.5 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 48/117 (41%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRN 96
++F SVGD VFFDT + P +L W + + F IEGHADE G+R
Sbjct: 44 PGSPQEFVVSVGDRVFFDTDQTDLSPEARAILDRQAQWLQQYNRYTFTIEGHADERGTRE 103
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+IALG +RA V +Y +RGI +RM+ SYGKE P +D +++NRRA+ L
Sbjct: 104 YNIALGAKRAQNVRDYLASRGIDPARMRTISYGKERPVAVCNDISCWSQNRRAVTVL 160
>gi|66044664|ref|YP_234505.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
gi|289674679|ref|ZP_06495569.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
syringae FF5]
gi|302187150|ref|ZP_07263823.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
syringae 642]
gi|63255371|gb|AAY36467.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
gi|330896136|gb|EGH28357.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
japonica str. M301072PT]
gi|330936710|gb|EGH40898.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv. pisi
str. 1704B]
gi|330959272|gb|EGH59532.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
maculicola str. ES4326]
gi|330968884|gb|EGH68950.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
aceris str. M302273PT]
Length = 167
Score = 84.5 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 38/127 (29%), Positives = 71/127 (55%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL 84
++ + SL E+ + + +F+ S ++P ++ L L+ + +
Sbjct: 39 PNAGYGANSGAVDGSLSEEAALRAITTFYFEYDSSDLKPEAMRSLDVHAKDLKANGARVV 98
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+EG+ DE G+R ++ALG RRA AV Y V +G+S +++++ SYG+E P G+DE ++A
Sbjct: 99 LEGNTDERGTREYNMALGERRAKAVQRYLVLQGVSPAQLELVSYGEERPVATGNDEQSWA 158
Query: 145 KNRRAIV 151
+NRR +
Sbjct: 159 QNRRVEL 165
>gi|291280094|ref|YP_003496929.1| flagellar motor protein MotB [Deferribacter desulfuricans SSM1]
gi|290754796|dbj|BAI81173.1| flagellar motor protein MotB [Deferribacter desulfuricans SSM1]
Length = 249
Score = 84.5 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 4/129 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ ++ + ++ + S + DSV F S I P+ I +L L + + + L+E
Sbjct: 98 EQANLSSQISVVKTDKGISVRIMDSVLFAPGSAEILPSAIPILEKLAAVMRDTPYNILVE 157
Query: 87 GHAD----ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
GH D S+ L RA AV + ++RG+ ++ Y + P V +
Sbjct: 158 GHTDDIPISTPKYPSNWELSTARAVAVVKFLISRGVKPEKLSAAGYAQYHPLVPNITPEN 217
Query: 143 YAKNRRAIV 151
AKNRR +
Sbjct: 218 RAKNRRVEI 226
>gi|170720793|ref|YP_001748481.1| OmpF family protein [Pseudomonas putida W619]
gi|169758796|gb|ACA72112.1| OmpF family protein [Pseudomonas putida W619]
Length = 345
Score = 84.5 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 4/138 (2%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD ++P + NL ++++
Sbjct: 204 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQ 263
Query: 79 H-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVY 136
+ ++EGH D +G + L RRA AV + + ++R+ YG+ P
Sbjct: 264 YPQTTTVVEGHTDSVGPDAYNQKLSERRANAVKEVLTQQYGVESTRVDSVGYGETRPVAD 323
Query: 137 GHDEDAYAKNRRAIVFLK 154
ED A NRR ++
Sbjct: 324 NATEDGRAVNRRVEAQVE 341
>gi|260220860|emb|CBA28849.1| Outer membrane protein A [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 203
Score = 84.5 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 1/114 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FFD ++ L +L S ++ + + +I GH D G + + L +
Sbjct: 89 VTYAADAFFDFDKSVLKAEGKAKLDDLVSKVKAINLEVIIAVGHTDATGDDSYNQKLSVA 148
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
R+ AV Y V++GI +R+ G++ P ++ AKNRR + + G R+
Sbjct: 149 RSEAVKAYLVSKGIEKNRVYTEGKGEKQPVADNKTKEGRAKNRRVEIEVVGTRS 202
>gi|224437727|ref|ZP_03658674.1| OmpA family protein [Helicobacter cinaedi CCUG 18818]
Length = 147
Score = 84.5 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 48/123 (39%), Gaps = 1/123 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
T ++ S + ++ + F + S + +VL+ + + G D
Sbjct: 13 QGTGVSVSREGDGIILNMPGDITFKSGSDDLSSDFYKVLNKKVLN-KYDKTIVTVVGFTD 71
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS +++AL +RA +V Y + + R V G+ P + AKNRR
Sbjct: 72 NTGSDKTNLALSKKRAESVAAYLQNQKVKTERFVVDGLGESEPIASNKTAEGRAKNRRVE 131
Query: 151 VFL 153
+ L
Sbjct: 132 ISL 134
>gi|124007829|ref|ZP_01692531.1| outer membrane protein [Microscilla marina ATCC 23134]
gi|123986775|gb|EAY26556.1| outer membrane protein [Microscilla marina ATCC 23134]
Length = 715
Score = 84.5 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYA 108
+++FFD +++ + L+ L + ++ + + GH D GS ++ L RA A
Sbjct: 608 NNLFFDVGKSALKSSSFAELNRLVNSMKNYPNMTIEVSGHTDAQGSPAKNLQLSKDRANA 667
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V NY ++GI ASRM+ YG+ P A+NRR +
Sbjct: 668 VLNYLKSKGIPASRMQAKGYGQTKPLATNGTAQGRARNRRVEFMI 712
>gi|157368917|ref|YP_001476906.1| OmpA/MotB domain-containing protein [Serratia proteamaculans 568]
gi|157320681|gb|ABV39778.1| OmpA/MotB domain protein [Serratia proteamaculans 568]
Length = 165
Score = 84.5 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 61/157 (38%), Gaps = 5/157 (3%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESS----LQEQFSSSVGDSVFFDTS 57
+ + + I +++++G + ++ L +S + + D V F +
Sbjct: 7 KNRFSLLAMMFIALLALTGCQSKPQGLTPEQIALLQSQGFKLTDNGWEFGLSDKVLFGNN 66
Query: 58 SYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
+ P + +G + F ++GH D G + + L LRRA AV + +
Sbjct: 67 IGKLNPESTDTVQKMGRALMSVGITQFRLDGHTDNYGEDSYNDQLSLRRANAVADLLASV 126
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
GI + ++ GK P A+NRR + +
Sbjct: 127 GIPRANIETRGMGKRDPVADNRTSSGRAENRRVAIVV 163
>gi|28871116|ref|NP_793735.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
tomato str. DC3000]
gi|71736967|ref|YP_275906.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|257487003|ref|ZP_05641044.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
tabaci ATCC 11528]
gi|289626503|ref|ZP_06459457.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|289650949|ref|ZP_06482292.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
aesculi str. 2250]
gi|298488202|ref|ZP_07006238.1| peptidoglycan-associated outer membrane lipoprotein [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|301384813|ref|ZP_07233231.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
tomato Max13]
gi|302063533|ref|ZP_07255074.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
tomato K40]
gi|302130603|ref|ZP_07256593.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
tomato NCPPB 1108]
gi|28854366|gb|AAO57430.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
tomato str. DC3000]
gi|71557520|gb|AAZ36731.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|298157260|gb|EFH98344.1| peptidoglycan-associated outer membrane lipoprotein [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|320323045|gb|EFW79134.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
glycinea str. B076]
gi|320329683|gb|EFW85672.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330868619|gb|EGH03328.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
aesculi str. 0893_23]
gi|330872646|gb|EGH06795.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
gi|330877972|gb|EGH12121.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330964831|gb|EGH65091.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
actinidiae str. M302091]
gi|330988976|gb|EGH87079.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331009355|gb|EGH89411.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
tabaci ATCC 11528]
gi|331016446|gb|EGH96502.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 166
Score = 84.5 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 39/127 (30%), Positives = 71/127 (55%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL 84
+T + SL E+ + + +F+ S ++P ++ L L+ + +
Sbjct: 38 PNAGYGANTGAVDGSLSEEAALRAITTFYFEYDSSDLKPEAMRSLDVHAKDLKANGARVV 97
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+EG+ DE G+R ++ALG RRA AV Y V +G+S +++++ SYG+E P G+DE ++A
Sbjct: 98 LEGNTDERGTREYNMALGERRAKAVQRYLVLQGVSPAQLELVSYGEERPVATGNDEQSWA 157
Query: 145 KNRRAIV 151
+NRR +
Sbjct: 158 QNRRVEL 164
>gi|296101897|ref|YP_003612043.1| type VI secretion system protein ImpK [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295056356|gb|ADF61094.1| type VI secretion system protein ImpK [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 412
Score = 84.5 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 49/138 (35%), Gaps = 4/138 (2%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
K ++ ++ + F ++S +R V++ + + L+
Sbjct: 264 KPEIDAGLVAVKDEADRSVVILKGDGLFASASTVVRDRYEPVINRIAQAMNNVSGKILVV 323
Query: 87 GHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
G++D + S+ L L RA +V R+K G+ P + +
Sbjct: 324 GYSDNVPIRSARFASNYELSLDRARSVQKMLQGSLSQPDRVKAEGRGEINPVAPNNTPEN 383
Query: 143 YAKNRRAIVFLKGCRANT 160
A+NRR + L NT
Sbjct: 384 RARNRRVEITLLVSPENT 401
>gi|15891235|ref|NP_356907.1| omp16 protein [Agrobacterium tumefaciens str. C58]
gi|22653886|sp|Q8U9L5|OMP16_AGRT5 RecName: Full=Outer membrane lipoprotein omp16 homolog; Flags:
Precursor
gi|15159600|gb|AAK89692.1| omp16 protein [Agrobacterium tumefaciens str. C58]
Length = 177
Score = 84.1 bits (206), Expect = 5e-15, Method: Composition-based stats.
Identities = 53/155 (34%), Positives = 80/155 (51%), Gaps = 7/155 (4%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTV------LNESSLQEQFSSSVGDSVFFDTSSYSIR 62
+++ ++++G N +S + Q+ F+ +VGD +FFDT S SIR
Sbjct: 21 VIAMTLALALAGCANKKNMPNSAGELGLGGAGSATPGSQQDFTVNVGDRIFFDTDSTSIR 80
Query: 63 PADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS 121
Q L W + +EGHADE G+R ++ALG RRA A ++ ++G+ AS
Sbjct: 81 ADAQQTLQRQAQWLSRYPNYAITVEGHADERGTREYNLALGARRAAATRDFLASQGVPAS 140
Query: 122 RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
RMK SYGKE P D +++NRRA+ L G
Sbjct: 141 RMKTISYGKEKPVAVCDDISCWSQNRRAVTVLGGA 175
>gi|291617923|ref|YP_003520665.1| YtxE [Pantoea ananatis LMG 20103]
gi|291152953|gb|ADD77537.1| YtxE [Pantoea ananatis LMG 20103]
gi|327394329|dbj|BAK11751.1| flagellar motor protein YtxE [Pantoea ananatis AJ13355]
Length = 413
Score = 84.1 bits (206), Expect = 5e-15, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 50/132 (37%), Gaps = 4/132 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
K + ++ +Q ++ F + S +R V+ + + L+
Sbjct: 265 KPEIDEGLVAVRDEADQSVVTLKGDGLFASGSTEVRGRYDAVIQRVAEAMNNVSGKILVV 324
Query: 87 GHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
G++D + S+ L L RA +V + SR+K G+ P V +
Sbjct: 325 GYSDNVPIRSARFASNYELSLARAQSVQTLLQKQLAKPSRVKAEGRGETHPLVPNTSAEN 384
Query: 143 YAKNRRAIVFLK 154
A+NRR + L+
Sbjct: 385 RARNRRVEITLQ 396
>gi|218510314|ref|ZP_03508192.1| peptidoglycan-associated lipoprotein [Rhizobium etli Brasil 5]
gi|327193465|gb|EGE60361.1| peptidoglycan-associated lipoprotein [Rhizobium etli CNPAF512]
Length = 177
Score = 84.1 bits (206), Expect = 5e-15, Method: Composition-based stats.
Identities = 50/156 (32%), Positives = 76/156 (48%), Gaps = 7/156 (4%)
Query: 8 IILSAITMMSISGIDNLDT------KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSI 61
++++ + ++++ + + F+ +VGD +FFDT S SI
Sbjct: 20 VMIALVAGLALASCAKKPPNSAGELGLGGGAGGAATPGSAQDFTVNVGDRIFFDTDSSSI 79
Query: 62 RPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA 120
R Q L W + +EGHADE G+R ++ALG RRA A +Y +RG+ A
Sbjct: 80 RADASQTLDRQAQWLARYPNYQITVEGHADERGTREYNLALGARRAAAAKDYLASRGVPA 139
Query: 121 SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
RMK SYGKE P D +++NRRA+ L G
Sbjct: 140 QRMKTISYGKERPVAVCDDISCWSQNRRAVTVLGGA 175
>gi|312134920|ref|YP_004002258.1| OmpA/MotB domain-containing protein [Caldicellulosiruptor
owensensis OL]
gi|311774971|gb|ADQ04458.1| OmpA/MotB domain protein [Caldicellulosiruptor owensensis OL]
Length = 257
Score = 84.1 bits (206), Expect = 5e-15, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 45/121 (37%), Gaps = 7/121 (5%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR-- 95
+ S + D V F+T S + P +V+ + + D + IEGH D +
Sbjct: 126 QEERGLSILLKD-VLFNTGSAKLTPQAKEVVHEIAKILEKVPDNNIRIEGHTDNVPIHNK 184
Query: 96 --NSSIALGLRRAYAV-FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
S+ L RA +V + R V YG+ P + A NRR +
Sbjct: 185 YFYSNWELSTARATSVLQEILRVSKVRPERFSVVGYGEYRPIASNKTPEGRALNRRVTIV 244
Query: 153 L 153
+
Sbjct: 245 I 245
>gi|294678012|ref|YP_003578627.1| OmpA family protein [Rhodobacter capsulatus SB 1003]
gi|294476832|gb|ADE86220.1| OmpA family protein [Rhodobacter capsulatus SB 1003]
Length = 224
Score = 84.1 bits (206), Expect = 5e-15, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 43/117 (36%), Gaps = 1/117 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIA 100
Q ++ V F S ++RP + L L D + GH D G +
Sbjct: 108 NQLIVTMPQDVLFAVDSAAVRPDLQRDLYTLSGSLNRYPDTTVDVVGHTDSDGDAAYNQR 167
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA AV + G+ + R+ G+E P A+NRR ++ R
Sbjct: 168 LSQDRANAVARILIGAGVPSYRVVAYGRGEEQPVASNLSAAGKAQNRRVEFIIRPNR 224
>gi|222529065|ref|YP_002572947.1| OmpA/MotB domain-containing protein [Caldicellulosiruptor bescii
DSM 6725]
gi|312622679|ref|YP_004024292.1| OmpA/MotB domain-containing protein [Caldicellulosiruptor
kronotskyensis 2002]
gi|222455912|gb|ACM60174.1| OmpA/MotB domain protein [Caldicellulosiruptor bescii DSM 6725]
gi|312203146|gb|ADQ46473.1| OmpA/MotB domain protein [Caldicellulosiruptor kronotskyensis 2002]
Length = 257
Score = 84.1 bits (206), Expect = 5e-15, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 45/121 (37%), Gaps = 7/121 (5%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR-- 95
+ S + D V FDT S + P +V+ + + + + IEGH D +
Sbjct: 126 QEERGLSILLKD-VLFDTGSAKLTPQAKEVVHEIAKILEKVPNNNIRIEGHTDNVPIHNK 184
Query: 96 --NSSIALGLRRAYAV-FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
S+ L RA +V + R V YG+ P + A NRR +
Sbjct: 185 YFYSNWELSTARATSVLQEILRVSKVRPERFSVVGYGEYRPIASNKTPEGRALNRRVTIV 244
Query: 153 L 153
+
Sbjct: 245 I 245
>gi|114765730|ref|ZP_01444828.1| peptidoglycan-associated lipoprotein [Pelagibaca bermudensis
HTCC2601]
gi|114541947|gb|EAU44982.1| peptidoglycan-associated lipoprotein [Roseovarius sp. HTCC2601]
Length = 174
Score = 84.1 bits (206), Expect = 5e-15, Method: Composition-based stats.
Identities = 49/169 (28%), Positives = 77/169 (45%), Gaps = 15/169 (8%)
Query: 1 MQYSTIFIILSAITMMSISGIDNL--------------DTKISSPDTVLNESSLQEQFSS 46
M Y + ++++A ++ + N+ F+
Sbjct: 1 MTYLSKALMIAAALGLAACTSGDRFGAGSGADGYGAGAGANAGIVPGSANDPQSPAYFNQ 60
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRR 105
++GD V F S+ P L W + D +IEGHADE G+R +IALG RR
Sbjct: 61 TIGDRVLFLVDQSSLTPEAQATLDAQAGWLMTNSDYLAVIEGHADEQGTREYNIALGARR 120
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
A A Y +++G++ +R+K+ SYGKE P +E YAKNRRA+ +
Sbjct: 121 ANATMEYLISKGVAPNRLKIISYGKERPVEICSEESCYAKNRRAVTVIS 169
>gi|296113807|ref|YP_003627745.1| OmpA/MotB domain protein [Moraxella catarrhalis RH4]
gi|295921501|gb|ADG61852.1| OmpA/MotB domain protein [Moraxella catarrhalis RH4]
Length = 224
Score = 84.1 bits (206), Expect = 5e-15, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 55/133 (41%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHD 80
++ ++ + + + ++ ++ F ++ A + L+ L + + H+
Sbjct: 86 KQIEQQMQGTGVTVTHDTDTGNINLTMPGNITFAHDDDTLNSAFLGRLNQLANTMNQYHE 145
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+I GH D G + L RRA +V Y + +G+ R++ YG P E
Sbjct: 146 TTIVIVGHTDSTGQAAYNQELSERRADSVRYYLINQGVDPYRIQTVGYGIRQPIASNATE 205
Query: 141 DAYAKNRRAIVFL 153
A+NRR + +
Sbjct: 206 AGRAQNRRVELMI 218
>gi|260767782|ref|ZP_05876717.1| outer membrane protein A precursor [Vibrio furnissii CIP 102972]
gi|260617291|gb|EEX42475.1| outer membrane protein A precursor [Vibrio furnissii CIP 102972]
Length = 332
Score = 84.1 bits (206), Expect = 5e-15, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 45/132 (34%), Gaps = 1/132 (0%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDC 81
++ + + + DS F +S + L + + E
Sbjct: 192 VVEQAPVQEPVAAAPKMVTKTVAFQKLDSKSFAHNSAKMSEEGKAQLGDLVAFLNEHPQA 251
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
+ I GH D G+ + L +RA V + +GI A+R+ G+ P
Sbjct: 252 NVEITGHTDSTGAEAYNQKLSEKRAQGVSDALQEQGIDAARITAKGEGESNPIASNATAA 311
Query: 142 AYAKNRRAIVFL 153
+NRR + +
Sbjct: 312 GREQNRRVEIVI 323
>gi|146283137|ref|YP_001173290.1| peptidoglycan-associated lipoprotein OprL [Pseudomonas stutzeri
A1501]
gi|145571342|gb|ABP80448.1| peptidoglycan-associated lipoprotein OprL [Pseudomonas stutzeri
A1501]
gi|327481490|gb|AEA84800.1| peptidoglycan-associated lipoprotein OprL [Pseudomonas stutzeri DSM
4166]
Length = 167
Score = 84.1 bits (206), Expect = 5e-15, Method: Composition-based stats.
Identities = 38/127 (29%), Positives = 71/127 (55%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL 84
D+ + S+ E+ + + +F+ S ++P ++ L L+ + +
Sbjct: 39 PNAGYGADSGAIDGSMSEEAALRAITTFYFEYDSSDLKPEAMRALDVHAKDLKGNGARVV 98
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+EGH DE G+R ++ALG RR+ AV Y V +G+S +++++ SYG+E P G+DE ++A
Sbjct: 99 LEGHTDERGTREYNMALGERRSKAVQRYLVLQGVSPAQLELVSYGEERPVAMGNDEQSWA 158
Query: 145 KNRRAIV 151
+NRR +
Sbjct: 159 QNRRVEL 165
>gi|302872092|ref|YP_003840728.1| OmpA/MotB domain protein [Caldicellulosiruptor obsidiansis OB47]
gi|302574951|gb|ADL42742.1| OmpA/MotB domain protein [Caldicellulosiruptor obsidiansis OB47]
Length = 257
Score = 84.1 bits (206), Expect = 5e-15, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 45/121 (37%), Gaps = 7/121 (5%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR-- 95
+ S + D V FDT S + P +V+ + + + + IEGH D +
Sbjct: 126 QEERGLSILLKD-VLFDTGSAKLTPQAKEVVHEIAKILEKVPNNNIRIEGHTDNVPIHNK 184
Query: 96 --NSSIALGLRRAYAV-FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
S+ L RA +V + R V YG+ P + A NRR +
Sbjct: 185 YFYSNWELSTARATSVLQEILRVSKVKPERFSVVGYGEYRPIASNKTPEGRALNRRVTIV 244
Query: 153 L 153
+
Sbjct: 245 I 245
>gi|254487455|ref|ZP_05100660.1| OmpA family domain protein [Roseobacter sp. GAI101]
gi|214044324|gb|EEB84962.1| OmpA family domain protein [Roseobacter sp. GAI101]
Length = 221
Score = 84.1 bits (206), Expect = 5e-15, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 54/123 (43%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHAD 90
D+ + ++ ++ ++ + F T S +++ L+ L + + + + GH D
Sbjct: 95 DSNVIITNTGDRLIVTLPQDILFATDSTTVQSGMQSDLAALARNVNVYSNSTLQVIGHTD 154
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
+G + + L RA AV N + G+ +R++ G+ P + A+NRR
Sbjct: 155 SVGDASYNQQLSEGRANAVANVLIGNGVPRNRIQAVGRGESQPVASNLNASGKAQNRRVE 214
Query: 151 VFL 153
+ +
Sbjct: 215 IVI 217
>gi|209883793|ref|YP_002287650.1| OmpA/MotB [Oligotropha carboxidovorans OM5]
gi|209871989|gb|ACI91785.1| OmpA/MotB [Oligotropha carboxidovorans OM5]
Length = 464
Score = 84.1 bits (206), Expect = 5e-15, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 49/125 (39%), Gaps = 1/125 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHA 89
V Q ++ F+T I P + +L L + I GH
Sbjct: 340 AAPVNATICQQLLGGLLGKGTIRFETGKAVIDPDSVGLLDRLVEVVLRCSTSQIEITGHT 399
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G S++AL RRA +V +Y + G+ + R+ +G P E+ A+NRR
Sbjct: 400 DSNGDAESNLALSNRRAQSVADYLIKAGVPSERITAIGFGSGRPIAPNDTEEGKAQNRRI 459
Query: 150 IVFLK 154
+K
Sbjct: 460 EFLVK 464
>gi|326564485|gb|EGE14711.1| OmpA/MotB domain protein [Moraxella catarrhalis 46P47B1]
gi|326568376|gb|EGE18456.1| OmpA/MotB domain protein [Moraxella catarrhalis BC7]
gi|326572277|gb|EGE22272.1| OmpA/MotB domain protein [Moraxella catarrhalis BC8]
gi|326574291|gb|EGE24238.1| OmpA/MotB domain protein [Moraxella catarrhalis O35E]
gi|326574875|gb|EGE24805.1| OmpA/MotB domain protein [Moraxella catarrhalis 101P30B1]
Length = 224
Score = 84.1 bits (206), Expect = 5e-15, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 55/133 (41%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHD 80
++ ++ + + + ++ ++ F ++ A + L+ L + + H+
Sbjct: 86 KQIEQQMQGTGVTVTHDTDTGNINLTMPGNITFAHDDDTLNSAFLGRLNQLANTMNQYHE 145
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+I GH D G + L RRA +V Y + +G+ R++ YG P E
Sbjct: 146 TTIVIVGHTDSTGQAAYNQELSERRADSVRYYLINQGVDPYRIQTVGYGIRQPIASNATE 205
Query: 141 DAYAKNRRAIVFL 153
A+NRR + +
Sbjct: 206 AGRAQNRRVELMI 218
>gi|254787924|ref|YP_003075353.1| OmpA/MotB domain-containing protein [Teredinibacter turnerae T7901]
gi|237683974|gb|ACR11238.1| OmpA/MotB domain protein [Teredinibacter turnerae T7901]
Length = 304
Score = 84.1 bits (206), Expect = 5e-15, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 61/142 (42%), Gaps = 2/142 (1%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL 72
+ + + ++ ++++S + + ++GD + F T ++P ++ L +
Sbjct: 149 MAVARANSMEEKASQMASKLESVTTKLDKRGLVITMGD-ILFATDESEVKPGAVRTLEKV 207
Query: 73 GSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
E D + L+EG D G+ + + L RRA AV V G++ R+ YG+E
Sbjct: 208 SDLLAEYPDREILVEGFTDSTGAADYNKNLSERRAEAVVKQLVDNGLAEDRLSAKGYGEE 267
Query: 132 MPSVYGHDEDAYAKNRRAIVFL 153
P +NRR + +
Sbjct: 268 YPVASNDTAAGRQQNRRVELVV 289
>gi|296410010|gb|ADH15781.1| OmpP6 [Haemophilus haemolyticus]
Length = 149
Score = 84.1 bits (206), Expect = 5e-15, Method: Composition-based stats.
Identities = 44/150 (29%), Positives = 74/150 (49%), Gaps = 3/150 (2%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIR 62
+ ++ ++ ++ N D + S+ + ++V+F Y+I
Sbjct: 1 FVKSLLVAGSVAALAACSSSNNDAAGNGAGQTFGGYSVSD--LQQRYNTVYFGFDKYNIE 58
Query: 63 PADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS 121
+Q+L + L+EG+ DE G+ +IALG RRA AV Y +G+ A
Sbjct: 59 GEYVQILDAHAAYLNATPAAKVLVEGNTDERGTPEYNIALGQRRADAVKGYLAGKGVDAG 118
Query: 122 RMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
++ SYG+E P+V GHDE AY+KNRRA++
Sbjct: 119 KLGTVSYGEEKPAVLGHDEAAYSKNRRAVL 148
>gi|269139251|ref|YP_003295952.1| OmpA/MotB domain protein [Edwardsiella tarda EIB202]
gi|267984912|gb|ACY84741.1| OmpA/MotB domain protein [Edwardsiella tarda EIB202]
Length = 162
Score = 84.1 bits (206), Expect = 5e-15, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 55/148 (37%), Gaps = 2/148 (1%)
Query: 9 ILSAITMMSISGIDNL-DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQ 67
I ++S + + + E +S + + V F + ++RP
Sbjct: 13 ITLGCALLSGCQHQATFSPQQIAVLQQQGFTPTPEGWSFGMSEKVLFGNNQATLRPESQA 72
Query: 68 VLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT 126
++ LG + ++G+ D G+ + L L+RA V + + G+ + +
Sbjct: 73 HVAELGHALSQVAILHARLDGYTDNYGTDQYNQQLSLKRADKVADAMASGGMPRANLTTR 132
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
GK P A+NRR + ++
Sbjct: 133 GMGKSNPIADNATRQGRAENRRVAIVIQ 160
>gi|152980803|ref|YP_001354158.1| peptidoglycan-associated lipoprotein [Janthinobacterium sp.
Marseille]
gi|151280880|gb|ABR89290.1| peptidoglycan-associated lipoprotein [Janthinobacterium sp.
Marseille]
Length = 169
Score = 84.1 bits (206), Expect = 5e-15, Method: Composition-based stats.
Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISS--------------PDTVLNESSLQEQFSSSV 48
+++FI+ SA+ M + S D + L +
Sbjct: 4 LTSVFILSSALLMAACSSTKLDDKAPVEDRTGSSAAADPRSVGTVNASSDPLNDPQGVLA 63
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAY 107
S++FD SY ++P QV+ N +L+ + +I+G+ D+ G ++ALG +RA
Sbjct: 64 KRSIYFDFDSYIVKPEFQQVVENHAKYLKSNQGRKIIIQGNTDDRGGAEYNLALGQKRAE 123
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
AV G+ ++M+ S GKE P G DE A+A+NRRA +
Sbjct: 124 AVRKSLSLLGVPETQMEAVSLGKEKPKALGSDEAAWAENRRADIV 168
>gi|302389670|ref|YP_003825491.1| OmpA/MotB domain protein [Thermosediminibacter oceani DSM 16646]
gi|302200298|gb|ADL07868.1| OmpA/MotB domain protein [Thermosediminibacter oceani DSM 16646]
Length = 248
Score = 84.1 bits (206), Expect = 5e-15, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 44/121 (36%), Gaps = 5/121 (4%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNS--- 97
+ + + FD+ +R QVL + L+K +EGH D + NS
Sbjct: 120 ERGLAIRFIEGALFDSGKAYLREDARQVLDKIAPILKKIQRPIRVEGHTDNVPIHNSEFP 179
Query: 98 -SIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+ L RA V YF+ + + YG+ P E A NRR + +
Sbjct: 180 SNWELSTTRAVNVVRYFIEKHNISPHMISAAGYGEYHPIAPNDSEKNRALNRRVDIIILN 239
Query: 156 C 156
Sbjct: 240 S 240
>gi|237803660|ref|ZP_04591245.1| OprF [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331025642|gb|EGI05698.1| OprF [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 344
Score = 84.1 bits (206), Expect = 5e-15, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 56/138 (40%), Gaps = 4/138 (2%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD + ++P + NL ++++
Sbjct: 203 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFNKSVVKPNSYGDIKNLADFMQQ 262
Query: 79 HDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVY 136
+ +EGH D +G + L RRA AV V + A R+ YG+ P
Sbjct: 263 YPSTTTTVEGHTDSVGPDAYNQKLSERRANAVKQVLVNQYGVGAGRVNSVGYGESRPVAD 322
Query: 137 GHDEDAYAKNRRAIVFLK 154
E A NRR ++
Sbjct: 323 NATEAGRAVNRRVEAQVE 340
>gi|226953967|ref|ZP_03824431.1| OmpA family outer membrane protein [Acinetobacter sp. ATCC 27244]
gi|226835321|gb|EEH67704.1| OmpA family outer membrane protein [Acinetobacter sp. ATCC 27244]
Length = 159
Score = 84.1 bits (206), Expect = 5e-15, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 63/157 (40%), Gaps = 4/157 (2%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESS---LQEQFSSSVGDSVFFDTS 57
M+ T+ I A+ ++++G + +L + E +S + + + FD +
Sbjct: 1 MRTHTLKISFIALLCLTLAGCLSFGPLKYRQVKMLKQEGFVLTDEGWSLGLPERLLFDFN 60
Query: 58 SYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
I+P ++ L + I GH D++G+ + L RA +V FV
Sbjct: 61 KSDIKPEHATEIARLAKQLNKYDLQKLKIVGHTDDVGNPEYNQKLSEERAQSVSMIFVNE 120
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G + + V G P + E+ A NRR V +
Sbjct: 121 GFKQNNLTVIGRGSSQPYLPNTSEENRASNRRVAVII 157
>gi|253702421|ref|YP_003023610.1| OmpA/MotB domain protein [Geobacter sp. M21]
gi|251777271|gb|ACT19852.1| OmpA/MotB domain protein [Geobacter sp. M21]
Length = 253
Score = 84.1 bits (206), Expect = 5e-15, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 5/130 (3%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGH 88
++ S Q S+ ++ FFD+ S +++ +L ++ S L + +EGH
Sbjct: 114 VGAQAKVSVSVTQRGLVVSLKEAGFFDSGSATLKQDSYALLKDVVSSLSSYSNGLRVEGH 173
Query: 89 ADELG----SRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAY 143
D + S S+ L RA V Y + ++ YG+ P + +
Sbjct: 174 TDNMPISSASFPSNWELSTARATNVLQYLTKQSDFDPYKISAAGYGEYRPVADNSEAEGR 233
Query: 144 AKNRRAIVFL 153
KNRR + L
Sbjct: 234 GKNRRVDIVL 243
>gi|167031827|ref|YP_001667058.1| OmpA/MotB domain-containing protein [Pseudomonas putida GB-1]
gi|166858315|gb|ABY96722.1| OmpA/MotB domain protein [Pseudomonas putida GB-1]
Length = 240
Score = 84.1 bits (206), Expect = 5e-15, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 1/134 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG-SWLEKHD 80
+ + +T + +Q + ++ F T S +I P+ L+NL S+ + +
Sbjct: 89 QEAELRAQMANTGVEVQRQGDQIKLIMPGNITFATDSANIAPSFYSPLNNLAGSFKQFNQ 148
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ G D GSR ++ L RRA AV Y ++G+ ASR+ V G + P D
Sbjct: 149 NTIEVVGFTDSTGSRQHNMDLSQRRAQAVSTYLTSQGVDASRISVRGMGPDQPIASNADA 208
Query: 141 DAYAKNRRAIVFLK 154
+ A+NRR V LK
Sbjct: 209 NGRAQNRRVEVNLK 222
>gi|163786823|ref|ZP_02181271.1| peptidoglycan-associated lipoprotein [Flavobacteriales bacterium
ALC-1]
gi|159878683|gb|EDP72739.1| peptidoglycan-associated lipoprotein [Flavobacteriales bacterium
ALC-1]
Length = 367
Score = 84.1 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 55/135 (40%), Gaps = 1/135 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
I++++ K P E + +V FD + L+ L L+++
Sbjct: 230 SIESVEKKEMKPIKEKIEEPEIKVNEVYTFKNVLFDFDKSELLDVSKGELNQLYKHLKEN 289
Query: 80 -DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
D I GH D +G + L +RA AV +Y +++G+ SR++ +G P
Sbjct: 290 KDLKVKIFGHTDNVGLEARNKELSKQRAKAVVDYLISQGLDVSRIQFIGFGSSKPISDND 349
Query: 139 DEDAYAKNRRAIVFL 153
++ NRR L
Sbjct: 350 TDEGRQLNRRVEFKL 364
>gi|328470939|gb|EGF41850.1| outer membrane protein OmpA [Vibrio parahaemolyticus 10329]
Length = 329
Score = 84.1 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 1/101 (0%)
Query: 54 FDTSSYSIRPADIQVL-SNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F+ S + + + L + + E I G+ D G + L RRA AV +Y
Sbjct: 218 FEFDSAKLTESVSERLDNFVSFLNEYPQAQVEITGYTDSSGPAAYNQKLSERRAQAVADY 277
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ GI A R+ V G+E P + KNRR V +
Sbjct: 278 ITSAGIDADRLTVKGMGEENPVADNSTREGREKNRRVEVVV 318
>gi|162448339|ref|YP_001610706.1| outer membrane porin precursor [Sorangium cellulosum 'So ce 56']
gi|161158921|emb|CAN90226.1| outer membrane porin precursor [Sorangium cellulosum 'So ce 56']
Length = 608
Score = 84.1 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 54/138 (39%), Gaps = 2/138 (1%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
+ + + + V FDT +IRP ++L + L+
Sbjct: 463 ACPNEKGKPNEDPTQNGCPVAVRVTETEIVILQQVQFDTGKATIRPVSNELLDEVAGVLK 522
Query: 78 KHD--CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
H ++GH D+ G+R + L RA +V V RGI+A R++ YG ++P
Sbjct: 523 DHPEILKIEVQGHTDDRGTRQFNTKLSQARAESVLKALVERGIAAQRLQAKGYGPDVPIA 582
Query: 136 YGHDEDAYAKNRRAIVFL 153
E KNRR +
Sbjct: 583 ENKTEAGRQKNRRVQFNI 600
>gi|304559160|gb|ADM41824.1| Outer membrane protein [Edwardsiella tarda FL6-60]
Length = 152
Score = 84.1 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 55/148 (37%), Gaps = 2/148 (1%)
Query: 9 ILSAITMMSISGIDNL-DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQ 67
I ++S + + + E +S + + V F + ++RP
Sbjct: 3 ITLGCALLSGCQHQATFSPQQIAVLQQQGFTPTPEGWSFGMSEKVLFGNNQATLRPESQA 62
Query: 68 VLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT 126
++ LG + ++G+ D G+ + L L+RA V + + G+ + +
Sbjct: 63 HVAELGHALSQVAILHARLDGYTDNYGTDQYNQQLSLKRADKVADAMASGGMPRANLTTR 122
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
GK P A+NRR + ++
Sbjct: 123 GMGKSNPIADNATRQGRAENRRVAIVIQ 150
>gi|170703354|ref|ZP_02894140.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
gi|170131738|gb|EDT00280.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
Length = 243
Score = 84.1 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 48/130 (36%), Gaps = 1/130 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFL 84
+ ++ Q + S F S ++ P+ Q L+ L + +
Sbjct: 112 AQPQPVVQTQPVAAPVAQRQVLLQGSANFTFDSAALTPSARQELNRFLDANRDARFSRVT 171
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+ G+ D G+ ++ L RA AV Y G+ A R G P V + A
Sbjct: 172 VTGYTDSQGAHAHNVRLSEARARAVATYLRTGGLRAERFTTVGKGAAEPVVSNATAEGRA 231
Query: 145 KNRRAIVFLK 154
+NRR + L+
Sbjct: 232 QNRRVEIELE 241
>gi|110834388|ref|YP_693247.1| OmpA family protein [Alcanivorax borkumensis SK2]
gi|110647499|emb|CAL16975.1| OmpA family protein [Alcanivorax borkumensis SK2]
Length = 362
Score = 84.1 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYA 108
+++ F+ S +I + +L L L+ + D I GH D GS + L RRA A
Sbjct: 255 NNIGFELDSANITASSRPILDRLVKALKSQTNFDVEIAGHTDSSGSAEYNEGLSDRRAKA 314
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
V Y + +GIS+ R+ YG+ +P A NRR +
Sbjct: 315 VRQYLIDQGISSERLTARGYGEVVPVASNETASGRAMNRRVEFRVS 360
>gi|114565809|ref|YP_752963.1| hypothetical protein Swol_0240 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|114336744|gb|ABI67592.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 281
Score = 84.1 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 53/150 (35%), Gaps = 5/150 (3%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
+ + T + L + S D++ F + S + P +++ +G
Sbjct: 114 LTADEAQKGGSTSTTRLSDNLIVYEQERGLVISFKDTMLFASGSDELTPRAREIIQQIGG 173
Query: 75 WLEKHDCDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYG 129
L K +EGH D S+ L + RA V + R+ + YG
Sbjct: 174 ALLKLPNFIRVEGHTDNRPINTAKFPSNWELSVLRASNVVHVLNENARIPAERLSIIGYG 233
Query: 130 KEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
+ P V ++ A NRR + + + +
Sbjct: 234 ENRPLVANDSDEGRAMNRRVDIVILKKKYD 263
>gi|332879143|ref|ZP_08446844.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332682943|gb|EGJ55839.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 454
Score = 84.1 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 6/136 (4%)
Query: 22 DNLDTKISSPDTVLN-----ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW- 75
D D N + + +S ++ FD +IRP VL+N+ +
Sbjct: 315 DKDDECPEEAGPASNKGCPEVTQEVQTQLNSFAKTILFDVGKSTIRPESATVLNNIVNVL 374
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+ + F +EG+ D G+++ + L RAY+V Y V +GI+ +R+ +G E P
Sbjct: 375 NKYKNSKFSVEGYTDTSGNKDKNQRLSEDRAYSVKAYLVDKGINPARLSAKGFGPEKPIA 434
Query: 136 YGHDEDAYAKNRRAIV 151
+ NRR +
Sbjct: 435 SNKTKKGRELNRRVEI 450
>gi|187932715|ref|YP_001887659.1| chemotaxis protein MotB [Clostridium botulinum B str. Eklund 17B]
gi|187720868|gb|ACD22089.1| putative chemotaxis MotB protein [Clostridium botulinum B str.
Eklund 17B]
Length = 244
Score = 84.1 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 53/133 (39%), Gaps = 5/133 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ ++ + S D+VFF++ +I+ Q L ++ L D +EG+ D
Sbjct: 104 EGRVSTQIQERGLIISFNDNVFFNSGDATIKSEYKQKLISISKILNDIDNYIRVEGNTDN 163
Query: 92 ----LGSRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ +S+ L RA V V I++ ++ YG+ P E+ A N
Sbjct: 164 VAINTENFHSNWQLSAIRAANVVELLVKEGNINSDKLSAIGYGEYRPVKSNDTEEGRAAN 223
Query: 147 RRAIVFLKGCRAN 159
RR + + N
Sbjct: 224 RRVDIVILNNEYN 236
>gi|330959066|gb|EGH59326.1| OmpA/MotB [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 271
Score = 84.1 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 58/144 (40%), Gaps = 2/144 (1%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
++ + L + ++GD V FD ++ + + + + +
Sbjct: 123 AKLASAQQQGRWLEDQILSLATTQTDRGLVMTLGD-VLFDAGHAELKNSASRTILKVVQF 181
Query: 76 LEKHDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
L+ + + IEG+ D G R ++ L RA AV + + GI R++V YG++ P
Sbjct: 182 LQINPRRVVRIEGYTDSTGDRQENLNLSKDRAQAVADMLMDLGIDEKRIQVQGYGQQFPV 241
Query: 135 VYGHDEDAYAKNRRAIVFLKGCRA 158
E A+NRR + +
Sbjct: 242 DGNASERGRAQNRRVEIVFSDEKG 265
>gi|222149664|ref|YP_002550621.1| peptidoglycan-associated lipoprotein [Agrobacterium vitis S4]
gi|221736646|gb|ACM37609.1| peptidoglycan-associated lipoprotein [Agrobacterium vitis S4]
Length = 177
Score = 84.1 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 52/143 (36%), Positives = 70/143 (48%), Gaps = 4/143 (2%)
Query: 18 ISGIDNLDTKISS---PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
+ N+ S + F+ +VGD +FFDT S SIR Q L
Sbjct: 33 CASKKNMPNSASELGLGGAGAATPGSTQDFTVNVGDRIFFDTDSTSIRADAQQTLDRQAQ 92
Query: 75 W-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
W +EGHADE G+R ++ALG RRA + Y V+RGI A+R+K SYGKE P
Sbjct: 93 WLQRYSQYPITVEGHADERGTREYNLALGARRAASTKAYLVSRGIPANRIKTISYGKERP 152
Query: 134 SVYGHDEDAYAKNRRAIVFLKGC 156
D +++NRRA+ L G
Sbjct: 153 VATCDDISCWSQNRRAVTVLGGS 175
>gi|269102083|ref|ZP_06154780.1| outer membrane protein A precursor [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268161981|gb|EEZ40477.1| outer membrane protein A precursor [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 317
Score = 84.1 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 45/129 (34%), Gaps = 3/129 (2%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFL 84
+ V + E + +V F S + D L+ L+ D
Sbjct: 173 PAPVVAEPVYVDQVSVETLEE-LKLAVPFAFDSTELSAGDRAKLAPFEQRLQAQDAAQIY 231
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAY 143
+ G+ D GS + L ++RA AV + + SR+ G+ P +
Sbjct: 232 VVGYTDSRGSEAYNQKLSVKRADAVAEALRSVMNVDGSRIIAEGRGESNPVASNDTAEGR 291
Query: 144 AKNRRAIVF 152
A+NRR +
Sbjct: 292 AQNRRVEII 300
>gi|148252339|ref|YP_001236924.1| OmpA domain-containing protein [Bradyrhizobium sp. BTAi1]
gi|146404512|gb|ABQ33018.1| putative outer membrane protein with ompA domain [Bradyrhizobium
sp. BTAi1]
Length = 464
Score = 84.1 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 53/134 (39%), Gaps = 2/134 (1%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVG-DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
D + ++ + Q+ F+ +G + F+T + +L L +
Sbjct: 331 KADITVKPAAAPVDPTVCQQLFADLLGKARIRFETGRSDLDRDSTGLLDRLVEIAMRCPA 390
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ I GH D G ++ AL +RA AV +Y V G+ A R YG P
Sbjct: 391 ANVEIAGHTDAEGDAAANQALSEKRAQAVVDYLVKAGLPAERFTAVGYGSAQPVASNDTG 450
Query: 141 DAYAKNRRAIVFLK 154
D A+NRR ++
Sbjct: 451 DGRAQNRRIEFLVR 464
>gi|57168718|ref|ZP_00367850.1| omp18 [Campylobacter coli RM2228]
gi|305432654|ref|ZP_07401815.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter coli
JV20]
gi|1245150|gb|AAC35420.1| omp18 [Campylobacter coli]
gi|4454089|emb|CAA10786.1| PAL protein, putative [Campylobacter jejuni]
gi|57019999|gb|EAL56679.1| omp18 [Campylobacter coli RM2228]
gi|304444365|gb|EFM37017.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter coli
JV20]
Length = 165
Score = 84.1 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 66/164 (40%), Gaps = 10/164 (6%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG--------DSV 52
M+ I + ++S + + + + + V
Sbjct: 1 MKKILFSSIAAFALVISGCSTKSTSVSGDTSVDSNRGTGGSDGWDIDSKISQLNDTLGKV 60
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHD--CDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+FD ++IRP V++ + +EG+ DE G+ + ALGL+RA AV
Sbjct: 61 YFDFDKFNIRPDMQNVVNTNANIFNNEVSGVSITVEGNCDEWGTDEYNQALGLKRAKAVK 120
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+A+G+++ R+ V SYG+ P + A+NRRA L
Sbjct: 121 EALIAQGVNSDRIAVKSYGETNPVCTEKTKACDAQNRRAEFKLS 164
>gi|312877226|ref|ZP_07737195.1| OmpA/MotB domain protein [Caldicellulosiruptor lactoaceticus 6A]
gi|311796035|gb|EFR12395.1| OmpA/MotB domain protein [Caldicellulosiruptor lactoaceticus 6A]
Length = 257
Score = 84.1 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 45/121 (37%), Gaps = 7/121 (5%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR-- 95
+ S + D V FDT S + P +V+ + + + + IEGH D +
Sbjct: 126 QEERGLSILLKD-VLFDTGSAKLTPQAKEVVHEIAKILEKVPNNNIRIEGHTDNVPIHNK 184
Query: 96 --NSSIALGLRRAYAV-FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
S+ L RA +V + R V YG+ P + A NRR +
Sbjct: 185 YFYSNWELSTARATSVLQEILRVSKVRPERFSVVGYGEYRPIASNKTPEGRALNRRVTIV 244
Query: 153 L 153
+
Sbjct: 245 I 245
>gi|262404181|ref|ZP_06080736.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio sp.
RC586]
gi|262349213|gb|EEY98351.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio sp.
RC586]
Length = 172
Score = 84.1 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 21/172 (12%)
Query: 1 MQYSTIF----IILSAITMMSIS---------------GIDNLDTKISSPDTVLNESSLQ 41
MQ + + I L + + + S + +D+ + L E L+
Sbjct: 1 MQLNKVLKGLMIALPVLAVTACSSSNDAANSGSETNQSAVSTVDSNALNAQGQLTEQELK 60
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIA 100
EQ + +++F + +I +L+ + ++ IEGHADE G+ +IA
Sbjct: 61 EQ-ALRENQTIYFAFDNATIASDYEAMLAAHAAYLVKNPSLKVTIEGHADERGTPEYNIA 119
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
LG RRA AV Y A G+ A ++ + SYG+E P V G ++AYAKNRRA++
Sbjct: 120 LGERRAQAVAKYLEALGVQADQVSIVSYGEEKPLVLGQSDEAYAKNRRAVLV 171
>gi|148546044|ref|YP_001266146.1| OmpA/MotB domain-containing protein [Pseudomonas putida F1]
gi|148510102|gb|ABQ76962.1| OmpA/MotB domain protein [Pseudomonas putida F1]
Length = 247
Score = 84.1 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 1/134 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG-SWLEKHD 80
+ + +T + +Q + ++ F T S +I P+ L+NL S+ + +
Sbjct: 97 QEAELRAQMANTGVEVQRQGDQIKLIMPGNITFATDSANIAPSFYSPLNNLAGSFKQFNQ 156
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ G D GSR ++ L RRA AV Y ++G+ ASR+ V G + P D
Sbjct: 157 NTIEVVGFTDSTGSRQHNMDLSQRRAQAVSTYLTSQGVDASRISVRGMGPDQPIASNADA 216
Query: 141 DAYAKNRRAIVFLK 154
+ A+NRR V LK
Sbjct: 217 NGRAQNRRVEVNLK 230
>gi|21230892|ref|NP_636809.1| outer membrane protein [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gi|66769109|ref|YP_243871.1| outer membrane protein [Xanthomonas campestris pv. campestris str.
8004]
gi|188992257|ref|YP_001904267.1| OmpA family outer membrane lipoprotein [Xanthomonas campestris pv.
campestris str. B100]
gi|21112502|gb|AAM40733.1| outer membrane protein [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gi|66574441|gb|AAY49851.1| outer membrane protein [Xanthomonas campestris pv. campestris str.
8004]
gi|167734017|emb|CAP52223.1| OmpA family outer membrane lipoprotein [Xanthomonas campestris pv.
campestris]
Length = 241
Score = 84.1 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 1/129 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGH 88
+ +T ++ + + ++ D + FD +++P L+ + S E + + GH
Sbjct: 102 TANTGIDVQRQGDNITLNLPDGITFDFGKSALKPQFYTALNGVASTLREYNQTMVEVVGH 161
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D +GS + L RA AV Y A+G+ RM+ GK P + A+NRR
Sbjct: 162 TDSVGSDAVNQRLSEERANAVAQYLTAQGVQRERMETMGAGKRYPIADNSTDAGRAQNRR 221
Query: 149 AIVFLKGCR 157
+ L R
Sbjct: 222 VEIRLIPLR 230
>gi|332519379|ref|ZP_08395846.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
gi|332045227|gb|EGI81420.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
Length = 476
Score = 84.1 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 42/125 (33%), Positives = 63/125 (50%), Gaps = 1/125 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHA 89
P+ V + +S ++ FDT S + +VL N+ E D +F IEGH
Sbjct: 351 PEVVAQPTQEVIDQLNSYARTILFDTGKSSFKEQTKEVLKNITAILKEYPDSNFTIEGHT 410
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D +GS++S+ L RRA AV +Y +A GISASR+ +G++ P + NRR
Sbjct: 411 DSVGSKSSNQKLSERRANAVRDYLIANGISASRLSAYGFGEDYPVDSNATRNGRKNNRRT 470
Query: 150 IVFLK 154
+ LK
Sbjct: 471 EIKLK 475
>gi|254000099|ref|YP_003052162.1| peptidoglycan-associated lipoprotein [Methylovorus sp. SIP3-4]
gi|313202058|ref|YP_004040716.1| peptidoglycan-associated lipoprotein [Methylovorus sp. MP688]
gi|253986778|gb|ACT51635.1| peptidoglycan-associated lipoprotein [Methylovorus sp. SIP3-4]
gi|312441374|gb|ADQ85480.1| peptidoglycan-associated lipoprotein [Methylovorus sp. MP688]
Length = 178
Score = 84.1 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 44/178 (24%), Positives = 82/178 (46%), Gaps = 22/178 (12%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISS---------------------PDTVLNESS 39
M S + +L A+ + + S + + ++ ++ +
Sbjct: 1 MNKSLVTSVLLAMMLAACSSKPVKNAPVVEDKSPAQTTTSQSSDSASTSGVQNSSMSVNP 60
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSS 98
L + + SV+FD ++P +++ + +E D +++G+ DE G+R +
Sbjct: 61 LTDPNNILSKRSVYFDFDKDEVKPEYRDLVNAHAKYLVEHPDAKVILQGNTDERGTREYN 120
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
+ALG RRA AV +G+S +++ SYG+E P G DE AY+KNRRA + +G
Sbjct: 121 LALGQRRAVAVKQVLNLQGVSDKQIETISYGEEKPQAAGSDEAAYSKNRRADIVYQGE 178
>gi|212283809|gb|ACJ23322.1| outer membrane protein OmpA [Vibrio parahaemolyticus]
Length = 301
Score = 84.1 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 41/101 (40%), Gaps = 1/101 (0%)
Query: 54 FDTSSYSIRPADIQVL-SNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F+ S + + + L + + E I G+ D G + L RRA AV +Y
Sbjct: 190 FEFDSAKLTESVSERLDNFVSFLNEYPQAQVEITGYTDSSGPAAYNQKLSERRAQAVADY 249
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
GI A R+ V G+E P + KNRR V +
Sbjct: 250 ITGAGIDADRLTVKGMGEENPVADNSTREGREKNRRVEVVV 290
>gi|70732082|ref|YP_261838.1| peptidoglycan-associated lipoprotein [Pseudomonas fluorescens Pf-5]
gi|68346381|gb|AAY93987.1| peptidoglycan-associated lipoprotein [Pseudomonas fluorescens Pf-5]
Length = 165
Score = 84.1 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 41/130 (31%), Positives = 71/130 (54%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+T + SL E+ + + +F+ S ++P ++ L L+ +
Sbjct: 34 AVDPNAGYGANTGAVDGSLSEEAALRAITTFYFEYDSSDLKPEAMRALDVHAKDLKANGA 93
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
++EG+ DE G+R ++ALG RRA AV Y V +G+S +++++ SYGKE P GHDE
Sbjct: 94 RVVLEGNTDERGTREYNMALGERRAKAVQRYLVLQGVSPAQLELVSYGKERPVATGHDEQ 153
Query: 142 AYAKNRRAIV 151
++A+NRR +
Sbjct: 154 SWAQNRRVEL 163
>gi|26991353|ref|NP_746778.1| OmpA/MotB domain protein [Pseudomonas putida KT2440]
gi|24986416|gb|AAN70242.1|AE016663_10 OmpA family protein [Pseudomonas putida KT2440]
Length = 172
Score = 84.1 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 29/159 (18%), Positives = 57/159 (35%), Gaps = 6/159 (3%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLN-----ESSLQEQFSSSVGDSVFFD 55
M + M++++G + K +P+ + + E ++ + V F
Sbjct: 11 MHALRFPLWALLFAMLALTGCQSAPQKGLTPEQIAVLKREGFTPTDEGWAYDLSGKVLFG 70
Query: 56 TSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
+ S+ ++ +G L ++GHAD G + L RRA +V V
Sbjct: 71 SDLDSLNGQSQAIVERIGKALLGVGIQGVRVDGHADSSGKAAYNQQLSERRAQSVTKALV 130
Query: 115 ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G+ A ++ G P +NRR + +
Sbjct: 131 GIGMQAQNIQSRGLGSSQPVADNRTSAGRTENRRVSIVV 169
>gi|197119876|ref|YP_002140303.1| OmpA family outer membrane lipoprotein [Geobacter bemidjiensis Bem]
gi|197089236|gb|ACH40507.1| OmpA family outer membrane lipoprotein [Geobacter bemidjiensis Bem]
Length = 199
Score = 84.1 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 4/140 (2%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVG---DSVFFDTSSYSIRPADIQVLSNLGS 74
+ +T S V E+ + V V+F+ S + LS
Sbjct: 58 AAQQPITETTPSREQPVAQETPKDAGKAQEVQAELQKVYFNFDSSDLSEEARASLSKNAE 117
Query: 75 W-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
+ + IEG+ DE GS + ++ALG RRA + +Y V GI++ R+ SYG+E P
Sbjct: 118 YLSRQAGTKVRIEGNCDERGSDDYNMALGERRAKSAKDYLVNLGIASDRLSTISYGEEKP 177
Query: 134 SVYGHDEDAYAKNRRAIVFL 153
+ GHDE A+AKNRR +
Sbjct: 178 ADPGHDEAAWAKNRRDEFVI 197
>gi|226943639|ref|YP_002798712.1| outer membrane protein, OmpA/MotB family [Azotobacter vinelandii
DJ]
gi|226718566|gb|ACO77737.1| outer membrane protein, OmpA/MotB family [Azotobacter vinelandii
DJ]
Length = 270
Score = 84.1 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 2/124 (1%)
Query: 36 NESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADELGS 94
+ + ++GD V FDT +R A + + + +L + + IEG+ D G
Sbjct: 142 TTTETERGLVMTLGD-VLFDTGREELRSAATRTVVQVARFLRLNQRRVVRIEGYTDSQGD 200
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
++ L RA +V + V G+ A R++V YG+ P A+NRR +
Sbjct: 201 DQLNLELSRGRAQSVKDMLVDLGVDAGRVQVAGYGEAYPVAENASSQGRARNRRVEIVFS 260
Query: 155 GCRA 158
Sbjct: 261 DEEG 264
>gi|238761919|ref|ZP_04622893.1| Outer membrane protein and peptidoglycan-associated (lipo)protein
[Yersinia kristensenii ATCC 33638]
gi|238700033|gb|EEP92776.1| Outer membrane protein and peptidoglycan-associated (lipo)protein
[Yersinia kristensenii ATCC 33638]
Length = 169
Score = 84.1 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 61/158 (38%), Gaps = 6/158 (3%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESS-----LQEQFSSSVGDSVFFDT 56
Q + ++ A+ ++ + G + +P+ + + + + V FD+
Sbjct: 9 QKNPLWFSFFALCLLVLVGCQAKPHQGLTPEQIAALQEQGFKLTDNGWEFGLANKVLFDS 68
Query: 57 SSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA 115
+ + +Q + ++G ++GH D +G + L RA AV + A
Sbjct: 69 DVRKLNASGVQTVQHIGRALHNVGINHMRVDGHTDAMGEDGYNQKLSYERASAVADSLAA 128
Query: 116 RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
GI + ++V GK P A+NRR + +
Sbjct: 129 IGIPRANIEVHGRGKLEPVADNRTSKGRAENRRVAMIV 166
>gi|118588324|ref|ZP_01545733.1| omp16 protein [Stappia aggregata IAM 12614]
gi|118439030|gb|EAV45662.1| omp16 protein [Stappia aggregata IAM 12614]
Length = 161
Score = 84.1 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 47/146 (32%), Positives = 71/146 (48%), Gaps = 4/146 (2%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
I ++ + S + + + F +VGD VFF+ +
Sbjct: 14 IAVCFAVLFAAACAQTKPDGLSSNV---KPGTGQDFVVNVGDRVFFEEDQSVLNAQGQAT 70
Query: 69 LSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
L+N W +EGHADE G+R +IALG RRA + +Y VA+G++ASR+K S
Sbjct: 71 LANQAKWLNRYSQYTITVEGHADERGTRQYNIALGARRAQSARDYLVAQGVNASRIKTIS 130
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFL 153
YGKE P +D +++NRRA+ L
Sbjct: 131 YGKERPVAVCNDNSCWSQNRRAVTVL 156
>gi|256830358|ref|YP_003159086.1| peptidoglycan-associated lipoprotein [Desulfomicrobium baculatum
DSM 4028]
gi|256579534|gb|ACU90670.1| peptidoglycan-associated lipoprotein [Desulfomicrobium baculatum
DSM 4028]
Length = 176
Score = 84.1 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 20/172 (11%)
Query: 1 MQYSTIF-IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSV----------- 48
M+ ++F +I+ A ++ G + + + + S SS+
Sbjct: 1 MRKLSMFVLIVLAFSLAMAGGCSKKVSSTPAGTSAASSSPDAGGLSSAQLEAQRLAELQR 60
Query: 49 -------GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIA 100
D ++F + QVL+ L+ H LIEGH DE G+ ++A
Sbjct: 61 QAIDKIGADRIYFAFDRSELSDQSRQVLAEKAELLKTHAALSLLIEGHCDERGTNEYNMA 120
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
LG RRA A + Y V GI++ R+ + SYG+E P+V G +E+A+AKNRR
Sbjct: 121 LGERRARAAYEYLVLMGIASDRITIISYGEEYPAVPGSNEEAWAKNRRDEFK 172
>gi|330958963|gb|EGH59223.1| OprF [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 344
Score = 84.1 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 56/138 (40%), Gaps = 4/138 (2%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD + ++P + NL ++++
Sbjct: 203 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFNKSVVKPNSYGDIKNLADFMQQ 262
Query: 79 HDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVY 136
+ +EGH D +G + L RRA AV V + A R+ YG+ P
Sbjct: 263 YPSTTTTVEGHTDSVGPDAYNQKLSERRANAVKQVLVNQYGVGAGRVNSVGYGESRPVAD 322
Query: 137 GHDEDAYAKNRRAIVFLK 154
E A NRR ++
Sbjct: 323 NATEAGRAVNRRVEAQVE 340
>gi|16262781|ref|NP_435574.1| outer membrane protein [Sinorhizobium meliloti 1021]
gi|307315940|ref|ZP_07595434.1| Protein of unknown function DUF2092, periplasmic [Sinorhizobium
meliloti BL225C]
gi|14523413|gb|AAK64986.1| outer membrane protein [Sinorhizobium meliloti 1021]
gi|306898414|gb|EFN29107.1| Protein of unknown function DUF2092, periplasmic [Sinorhizobium
meliloti BL225C]
Length = 420
Score = 84.1 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 63/147 (42%), Gaps = 4/147 (2%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVF---FDTSSYSIRPAD 65
+L A +++ + + ++ P ++ S+Q+ + V FDT +++P
Sbjct: 35 LLMAGALVAATNVPCWSQSVADPVKQYSKESMQQALQTREQYDVHGLSFDTGQSTLQPGA 94
Query: 66 IQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L ++ + L+ I GH D GS S+ L L RA + V RGI A ++
Sbjct: 95 KPLLDDIATALKNFPDWSLRIVGHTDASGSAESNERLSLERANTIKAALVERGIDAGKLL 154
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIV 151
G+ P ++ A NRR +
Sbjct: 155 AAGAGQSRPIASNETDEGKALNRRVEL 181
>gi|322509420|gb|ADX04874.1| Outer membrane protein [Acinetobacter baumannii 1656-2]
gi|323519441|gb|ADX93822.1| putative lipoprotein precursor [Acinetobacter baumannii
TCDC-AB0715]
Length = 154
Score = 84.1 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 32/154 (20%), Positives = 58/154 (37%), Gaps = 3/154 (1%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ S FI L I + L + E ++ + + + FD + +
Sbjct: 1 MKLS--FIALLCIALAGCLSFGPLKYRQVKMLKKEGFVLTNEGWTLGLPERLLFDFNDAT 58
Query: 61 IRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
++ + L+ L + + I GH D++G+ + L RA +V N F+ G
Sbjct: 59 LKQSHEAELTRLANQLNKYDLNKLKIVGHTDDVGNPEYNQKLSEERAQSVANLFLTHGFK 118
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ V G P V + A NRR + +
Sbjct: 119 KENIYVIGRGSTQPYVPNTTNENRAINRRVAIVI 152
>gi|90021803|ref|YP_527630.1| Fis family transcriptional regulator [Saccharophagus degradans
2-40]
gi|89951403|gb|ABD81418.1| OmpA/MotB [Saccharophagus degradans 2-40]
Length = 288
Score = 84.1 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 46/133 (34%), Gaps = 4/133 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
+ + Q + + FF + + VL+ + + D + GH D
Sbjct: 95 ATGEVTLNGNQNWVEIVIDANSFFSSGQATPSDEARTVLNKVADIISPFDNAVAVGGHTD 154
Query: 91 ----ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
++ L RA V N G+S RM YG+ P + + N
Sbjct: 155 DTPINNAQFKNNWELSSARAVTVVNLLAFAGVSPERMSAVGYGEYRPIADNQTPEGRSAN 214
Query: 147 RRAIVFLKGCRAN 159
RR ++ + RA+
Sbjct: 215 RRVVLRVARDRAD 227
>gi|295399258|ref|ZP_06809240.1| OmpA/MotB domain protein [Geobacillus thermoglucosidasius C56-YS93]
gi|312110141|ref|YP_003988457.1| OmpA/MotB domain protein [Geobacillus sp. Y4.1MC1]
gi|294978724|gb|EFG54320.1| OmpA/MotB domain protein [Geobacillus thermoglucosidasius C56-YS93]
gi|311215242|gb|ADP73846.1| OmpA/MotB domain protein [Geobacillus sp. Y4.1MC1]
Length = 254
Score = 84.1 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 47/120 (39%), Gaps = 6/120 (5%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRN-- 96
+E + ++ + + FD+ S +RP D Q+ + + + +I GH D + N
Sbjct: 126 TEEGLAITILNDILFDSGSAEVRPQDRQLAKEISQMLVMNPPRNIIISGHTDNVPIHNAQ 185
Query: 97 --SSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L + RA + R+ YG+ P + KNRR + +
Sbjct: 186 FSSNWELSVMRAVNFMKLLLENPKLDPRLFSAKGYGEFKPVASNDTPEGRMKNRRVEILI 245
>gi|1000844|gb|AAA78948.1| 18.5 kDa protein [Bartonella bacilliformis]
Length = 171
Score = 84.1 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 45/119 (37%), Positives = 64/119 (53%), Gaps = 1/119 (0%)
Query: 36 NESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGS 94
++ F+ +VGD VFF S I ++L WL +IEGHAD+ G+
Sbjct: 17 ATPGSEQDFAITVGDRVFFSLDSSVIEADAQRILVRQAEWLLLYPHHTIMIEGHADDRGT 76
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
R ++ALG RRA AV +Y V+ G+S RMK SYGKE P D + +NRR ++ +
Sbjct: 77 REYNLALGQRRAIAVRDYLVSLGVSPQRMKTMSYGKERPVAVCDDISCWNQNRRVVISI 135
>gi|92113921|ref|YP_573849.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043]
gi|91797011|gb|ABE59150.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043]
Length = 294
Score = 84.1 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 3/131 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
D D +P E + + V V F+ S ++ +L ++ +
Sbjct: 162 DYQDQCPDTPAGA--EVNALGCAADLVLKDVNFEFDSATLTSEAENILDDVAAKLSSNES 219
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
D +EG+ D +GS + + L RRA +V Y V++G++A + YG++ P
Sbjct: 220 VDVRLEGYTDSVGSASYNKDLSQRRADSVKEYLVSKGVNADSITTYGYGEQNPIATNETA 279
Query: 141 DAYAKNRRAIV 151
+ A+NRR +
Sbjct: 280 EGRAENRRVEL 290
>gi|86606634|ref|YP_475397.1| OmpA family protein [Synechococcus sp. JA-3-3Ab]
gi|86555176|gb|ABD00134.1| OmpA family protein [Synechococcus sp. JA-3-3Ab]
Length = 273
Score = 84.1 bits (206), Expect = 7e-15, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 3/111 (2%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLR 104
S+ + FD IRP +L+ + L + + GH D +GS N ++ L LR
Sbjct: 161 ISLPGDLLFDFDKAEIRPEAASLLAEVAKSLREMPGARVQVNGHTDNIGSLNYNLDLSLR 220
Query: 105 RAYAVFNYFVAR--GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA AV +Y + +G +P E+ +NRR + +
Sbjct: 221 RANAVKDYLANLLPEDHPISWTTSGFGPTLPVADNDTEEGRQRNRRVDLII 271
>gi|221068229|ref|ZP_03544334.1| OmpA/MotB domain protein [Comamonas testosteroni KF-1]
gi|220713252|gb|EED68620.1| OmpA/MotB domain protein [Comamonas testosteroni KF-1]
Length = 215
Score = 83.7 bits (205), Expect = 7e-15, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FFD ++PA L +L ++ + + +I GH D +GS + L +R
Sbjct: 100 VTYSADAFFDFDKSVLKPAGKAKLDDLTGKIKDINLEVIIAVGHTDSIGSDAYNQKLSVR 159
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
RA AV Y V++GI SR+ GK+ P A+NRR + + G +A
Sbjct: 160 RAEAVKAYLVSKGIEKSRVYTEGKGKKQPVASNATAAGRAQNRRVEIEVVGTKA 213
>gi|145299366|ref|YP_001142207.1| OmpA family protein [Aeromonas salmonicida subsp. salmonicida A449]
gi|142852138|gb|ABO90459.1| OmpA family protein [Aeromonas salmonicida subsp. salmonicida A449]
Length = 162
Score = 83.7 bits (205), Expect = 7e-15, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 61/162 (37%), Gaps = 6/162 (3%)
Query: 1 MQYSTIFII-LSAITMMSISGIDNLDTKISSPDTVLNESS----LQEQFSSSVGDSVFFD 55
M+ + + L + + ++G + + + + + E ++ + V F
Sbjct: 1 MKITVLMKTGLIGLLLSVLAGCQSAPRGLMAEQIGVLKEQGFRLTDEGWTLDFSNRVLFA 60
Query: 56 TSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
S ++ P ++ LG L I+GH D G + L L+RA +V + V
Sbjct: 61 NDSEALNPDTRVLVEKLGMTLLGVGLNKARIDGHTDSNGPEAYNDQLSLKRAKSVADVLV 120
Query: 115 ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
G+ + + + G+ P A+NRR + +
Sbjct: 121 PVGMQPANLDIRGRGERDPVADNKTAAGRAENRRVGIIISNE 162
>gi|104780138|ref|YP_606636.1| OmpA family outer membrane protein [Pseudomonas entomophila L48]
gi|95109125|emb|CAK13822.1| putative outer membrane protein, OmpA family [Pseudomonas
entomophila L48]
Length = 239
Score = 83.7 bits (205), Expect = 7e-15, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 1/125 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHA 89
+T + +Q + ++ F T S +I P+ L+NL + + + + + G
Sbjct: 98 ANTGVEVQRQGDQIKLIMPGNITFATDSANISPSFYSPLNNLANSFKQFNQNTIEVVGFT 157
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GSR ++ L RRA AV Y ++G+ ASR+ V G + P D + A+NRR
Sbjct: 158 DSTGSRQHNMDLSQRRAQAVSTYLTSQGVDASRVTVRGMGPDQPIASNADANGRAQNRRV 217
Query: 150 IVFLK 154
V LK
Sbjct: 218 EVNLK 222
>gi|328542545|ref|YP_004302654.1| Omp16 protein [polymorphum gilvum SL003B-26A1]
gi|326412291|gb|ADZ69354.1| Omp16 protein [Polymorphum gilvum SL003B-26A1]
Length = 161
Score = 83.7 bits (205), Expect = 7e-15, Method: Composition-based stats.
Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 4/154 (2%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M I ++++ + + F +VGD VFF +
Sbjct: 6 MMARGARIAAIIGLTLALAACAQTKPDGLDGNVT---PGSGQDFVVNVGDRVFFAEDQST 62
Query: 61 IRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
+ L WL + +EGHADE G+R +IALG RRA + +Y V+RG++
Sbjct: 63 LSTQARATLDKQAQWLNLYSRYTITLEGHADERGTREYNIALGARRANSARDYLVSRGVA 122
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
ASR++ SYGKE P +D+ +++NRRA+ L
Sbjct: 123 ASRIRTISYGKERPVAVCNDDSCWSQNRRAVTVL 156
>gi|261378300|ref|ZP_05982873.1| OmpA family protein [Neisseria cinerea ATCC 14685]
gi|269145394|gb|EEZ71812.1| OmpA family protein [Neisseria cinerea ATCC 14685]
Length = 225
Score = 83.7 bits (205), Expect = 7e-15, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 50/124 (40%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHA 89
T + Q + ++V F T S + L+ ++ D I GH
Sbjct: 89 AGTQVQVQRQGNQIKLVMPENVTFATGSAVLSDNAQFALNTAAQTLVQYPDTTLTINGHT 148
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GS + L RA V Y +RG++ASR+ V YG MP + A+NRR
Sbjct: 149 DNTGSDAVNNPLSQHRAQTVAYYLQSRGVAASRLAVYGYGSHMPVASNATAEGRAQNRRV 208
Query: 150 IVFL 153
+ +
Sbjct: 209 EILI 212
>gi|172065635|ref|YP_001816347.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6]
gi|171997877|gb|ACB68794.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6]
Length = 231
Score = 83.7 bits (205), Expect = 7e-15, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 42/110 (38%), Gaps = 1/110 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLR 104
++ FDT +++ L L I G+ D G+ + L R
Sbjct: 122 ITLDSDANFDTDKSTLKTDARDKLDVLIEAAHGTPFKTVTISGYTDSTGTAEHNQQLSQR 181
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RA +V Y G+SA + V YG+ P AKNRR + L+
Sbjct: 182 RAQSVAQYLREHGLSAQKFDVRGYGENNPVASNATPAGRAKNRRVDITLE 231
>gi|326319363|ref|YP_004237035.1| OmpA/MotB domain-containing protein [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323376199|gb|ADX48468.1| OmpA/MotB domain protein [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 217
Score = 83.7 bits (205), Expect = 7e-15, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 55/129 (42%), Gaps = 1/129 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFL 84
+++ V+ + Q + + F T+ I+P VL + +
Sbjct: 82 QQVTQGTGVVVTQTQDNQLKLDIPSDISFATNRSDIQPNFAPVLDRFAEGLRNNPNAEVR 141
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
I G+ D G+ + + L L RA + NY +RG+S +R++V G P + A
Sbjct: 142 IVGYTDSTGNDSINNPLSLDRATSTRNYLTSRGVSGARIQVEGRGAREPVATNDTAEGRA 201
Query: 145 KNRRAIVFL 153
+NRR +++
Sbjct: 202 RNRRVEIYV 210
>gi|261253627|ref|ZP_05946200.1| outer membrane protein A precursor [Vibrio orientalis CIP 102891]
gi|260937018|gb|EEX93007.1| outer membrane protein A precursor [Vibrio orientalis CIP 102891]
Length = 320
Score = 83.7 bits (205), Expect = 7e-15, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
DS F +S ++P +LS L ++ + + I G+ D G+ + L +RA A
Sbjct: 208 DSGNFALNSTELKPESKSLLSELVQFMEQYPQANVEITGYTDSSGAAEYNQMLSEKRAQA 267
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
V N ++G+ +SR+ V+ G+ P A+NRR + + G
Sbjct: 268 VANELESQGVESSRITVSGEGENNPIASNDTRGGRAQNRRVEITVPG 314
>gi|317047358|ref|YP_004115006.1| peptidoglycan-associated lipoprotein [Pantoea sp. At-9b]
gi|316948975|gb|ADU68450.1| peptidoglycan-associated lipoprotein [Pantoea sp. At-9b]
Length = 170
Score = 83.7 bits (205), Expect = 7e-15, Method: Composition-based stats.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDT------------VLNESSLQEQF 44
MQ + + + L I + + S N + + +E + +
Sbjct: 1 MQLNKVLKGLMLALPVIAVAACSSHKNNNNDQTGMGADGAYGSGQNGNMSSDEQARLQMQ 60
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGL 103
+ V+F Y ++ Q+L ++L + IEGHADE G+ +IALG
Sbjct: 61 QLQQNNIVYFGLDKYDVQSEYAQMLDQHAAFLRSNPSYKVTIEGHADERGTPEYNIALGE 120
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
RRA AV Y +G+SA +M + SYGKE P+V GHDE AYAKNRRA++
Sbjct: 121 RRANAVKMYLQGKGVSADQMSIVSYGKEKPAVLGHDEAAYAKNRRAVLV 169
>gi|254463375|ref|ZP_05076791.1| OmpA family domain protein [Rhodobacterales bacterium HTCC2083]
gi|206679964|gb|EDZ44451.1| OmpA family domain protein [Rhodobacteraceae bacterium HTCC2083]
Length = 222
Score = 83.7 bits (205), Expect = 7e-15, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 58/133 (43%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD- 80
+ + S + + ++ ++ S+ + F + S ++ L+ + + L+ +
Sbjct: 86 QAAELQKSLGNDRVTITNTGDRLIVSLPQDITFASDSATLSSGIQSDLNAVATNLQSYPN 145
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ GH D G + L ++RA +V N G+S +R++ G++ P E
Sbjct: 146 STVQVIGHTDSTGEAGYNQNLSVQRANSVVNVLAGAGVSFTRLQGIGRGEDQPVASNLTE 205
Query: 141 DAYAKNRRAIVFL 153
+ A+NRR + +
Sbjct: 206 EGKAQNRRVEIVI 218
>gi|120556561|ref|YP_960912.1| OmpA/MotB domain-containing protein [Marinobacter aquaeolei VT8]
gi|120326410|gb|ABM20725.1| OmpA/MotB domain protein [Marinobacter aquaeolei VT8]
Length = 401
Score = 83.7 bits (205), Expect = 7e-15, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 49/143 (34%), Gaps = 2/143 (1%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
++ D + + ++ V F T+S I A + + ++
Sbjct: 259 VVNSQDQCPDTTAGATVDETGCEGITETVETIELRVQFPTNSSVIDNAYDNEIRRVADFM 318
Query: 77 EKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPS 134
E++ I GH D G + L RRA AV G+ R+ YG+ P
Sbjct: 319 EEYPETTVEIAGHTDSAGEAGYNQFLSQRRAEAVAGRLTGPLGVDPDRVSAVGYGEAEPV 378
Query: 135 VYGHDEDAYAKNRRAIVFLKGCR 157
A+NRR ++ R
Sbjct: 379 ATNDTPAGRAQNRRVEARIQVRR 401
>gi|290475121|ref|YP_003468005.1| hypothetical protein XBJ1_2106 [Xenorhabdus bovienii SS-2004]
gi|289174438|emb|CBJ81232.1| Conserved hypothetical protein with OmpA/MotB domains (probable
component of SST VI cluster) [Xenorhabdus bovienii
SS-2004]
Length = 403
Score = 83.7 bits (205), Expect = 7e-15, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 56/128 (43%), Gaps = 4/128 (3%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHA 89
S +LN ++L ++ ++ F+T S I+ ++ V+ ++ + + L+ G+
Sbjct: 267 SAAGLLNVTNLADRSIVTLRGDGLFNTGSTQIKNNELPVIKHIAETINNIKGEILVIGYT 326
Query: 90 DELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
D++ +S+ AL L RA +V F R++ G+ P AK
Sbjct: 327 DDVPINSSGFSSNYALSLARAKSVKREFEKYLDHPERVRTEGRGESDPLFPNDTPSHRAK 386
Query: 146 NRRAIVFL 153
NRR + L
Sbjct: 387 NRRVEIVL 394
>gi|146282405|ref|YP_001172558.1| outer membrane protein OprF precursor [Pseudomonas stutzeri A1501]
gi|145570610|gb|ABP79716.1| outer membrane protein OprF precursor [Pseudomonas stutzeri A1501]
Length = 315
Score = 83.7 bits (205), Expect = 7e-15, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 2/122 (1%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELG 93
++ V V FD +R + NL +++++ ++EGH D +G
Sbjct: 190 VDNEPEPAPEVVRVELDVKFDFDKSRVREESYSDIKNLADFMQQYPQTTTVVEGHTDSVG 249
Query: 94 SRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ + L RRA AV N V G+ +R+ YG+ P E+ NRR
Sbjct: 250 TDQYNQRLSERRAEAVRNVLVNEYGVQGNRVNSVGYGESRPVADNSTEEGRQINRRVEAE 309
Query: 153 LK 154
++
Sbjct: 310 VE 311
>gi|254785154|ref|YP_003072582.1| OmpA family protein [Teredinibacter turnerae T7901]
gi|237683675|gb|ACR10939.1| OmpA family protein [Teredinibacter turnerae T7901]
Length = 216
Score = 83.7 bits (205), Expect = 7e-15, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 54/127 (42%), Gaps = 1/127 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHA 89
+ + + + ++ F T S+ I+P VL ++ L++ ++ GH
Sbjct: 89 QGSGVQVQRDGNTINLIMPGNITFATDSFDIKPEFHSVLDSVAQVLKEFKKTVIVVSGHT 148
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GS + L RA +V +Y + R +++ R++ YG MP +NRR
Sbjct: 149 DSTGSATYNQQLSENRANSVRSYLLNRSVASGRVQAVGYGPRMPIASNKTAQGRQQNRRV 208
Query: 150 IVFLKGC 156
+ L+
Sbjct: 209 ELKLEPT 215
>gi|254302656|ref|ZP_04970014.1| hypothetical protein FNP_0283 [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148322848|gb|EDK88098.1| hypothetical protein FNP_0283 [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 157
Score = 83.7 bits (205), Expect = 7e-15, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+LN + +E ++ FD +++P +L N+ ++E+++ + I GH D +
Sbjct: 17 DILNSEAPKEMTIVLDERALNFDFDKSNVKPEYYDLLKNIKEFVEQNNYEITIVGHTDSI 76
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIV 151
GS + L RRA +V + G++ R+ + + G+E P ++ A+NRR
Sbjct: 77 GSNAYNFKLSRRRAESVKAKLLEFGLTEDRIVGIEAMGEEQPIATNETKEGRAQNRRVEF 136
Query: 152 FL 153
L
Sbjct: 137 KL 138
>gi|189349521|ref|YP_001945149.1| peptidoglycan-associated lipoprotein [Burkholderia multivorans ATCC
17616]
gi|221201005|ref|ZP_03574045.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
multivorans CGD2M]
gi|221206543|ref|ZP_03579556.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
multivorans CGD2]
gi|221214397|ref|ZP_03587368.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
multivorans CGD1]
gi|189333543|dbj|BAG42613.1| peptidoglycan-associated lipoprotein [Burkholderia multivorans ATCC
17616]
gi|221165654|gb|EED98129.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
multivorans CGD1]
gi|221173852|gb|EEE06286.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
multivorans CGD2]
gi|221178855|gb|EEE11262.1| peptidoglycan-associated outer-membrane lipoprotein [Burkholderia
multivorans CGD2M]
Length = 169
Score = 83.7 bits (205), Expect = 7e-15, Method: Composition-based stats.
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 14/166 (8%)
Query: 1 MQYSTIFIILSAITMMSISGI-------DNLDTKISSPDTV------LNESSLQEQFSSS 47
M + + L+ + + +++ D + S +N L + S
Sbjct: 1 MMSKKVRLALAVMMIGALAACKSGVKLDDKANAGAMSTQPSADNVAQVNVDPLNDPNSPL 60
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRA 106
S++FD SYS++ +L +L+ H LI+G+ DE G+ ++ALG +RA
Sbjct: 61 AKRSIYFDFDSYSVKDEYQPLLQQHAQYLKSHPQRHVLIQGNTDERGTSEYNLALGQKRA 120
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
AV G++ S+M+ S GKE P GHDE ++A+NRRA +
Sbjct: 121 EAVRRALALLGVADSQMEAVSLGKEKPQATGHDEASWAQNRRADLV 166
>gi|88798562|ref|ZP_01114146.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Reinekea sp. MED297]
gi|88778662|gb|EAR09853.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Reinekea sp. MED297]
Length = 224
Score = 83.7 bits (205), Expect = 7e-15, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHA 89
V + + + Q + ++ FD +S ++ I L ++ L++++ I GH
Sbjct: 95 GTGVQVKRTEEGQIDLIMPGNITFDVNSSTVADGFIPTLRSVAKVLKEYENTLVTISGHT 154
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GS + + L +RA +V N + GI R+ YG+ P + A+NRR
Sbjct: 155 DSSGSEDYNQLLSEQRATSVANIILQEGIVVERVAAAGYGELQPIASNDTPEGRAENRRV 214
Query: 150 IVFL 153
+ L
Sbjct: 215 EITL 218
>gi|4530367|gb|AAD22006.1| major outer membrane protein [Pseudomonas fluorescens]
Length = 344
Score = 83.7 bits (205), Expect = 7e-15, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 56/138 (40%), Gaps = 4/138 (2%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD ++ + NL ++++
Sbjct: 203 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKENSYGDIKNLADFMKQ 262
Query: 79 HDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVY 136
+ +EGH D +G + L RRA AV + + +SR++ YG+ P
Sbjct: 263 YPSTSTTVEGHTDSVGPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSVGYGESRPVAD 322
Query: 137 GHDEDAYAKNRRAIVFLK 154
+ A NRR ++
Sbjct: 323 NATDAGRAVNRRVEAQVE 340
>gi|260428759|ref|ZP_05782736.1| inner membrane lipoprotein YiaD [Citreicella sp. SE45]
gi|260419382|gb|EEX12635.1| inner membrane lipoprotein YiaD [Citreicella sp. SE45]
Length = 221
Score = 83.7 bits (205), Expect = 7e-15, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 54/126 (42%), Gaps = 1/126 (0%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEG 87
++ ++ ++ ++ + F S ++R + +G L + + + G
Sbjct: 92 QQLGNNVSINNTGDRLVVTMPQDILFPFDSAALRSDLQADIRTVGRSLLQYPNTTVQVLG 151
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
H D G + L LRRA AV + +A G+ +SR++ G++ P + +NR
Sbjct: 152 HTDSDGDAAYNQKLSLRRAQAVSSVLIAEGVPSSRIQSIGRGEDQPIASNLTAEGKQQNR 211
Query: 148 RAIVFL 153
R + +
Sbjct: 212 RVEIVI 217
>gi|212638649|ref|YP_002315169.1| flagellar motor protein MotB [Anoxybacillus flavithermus WK1]
gi|212560129|gb|ACJ33184.1| Flagellar motor protein B [Anoxybacillus flavithermus WK1]
Length = 251
Score = 83.7 bits (205), Expect = 7e-15, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 47/135 (34%), Gaps = 6/135 (4%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFL 84
K + L+ + +E ++ + V FD+ S I+P V + + + + +
Sbjct: 111 VKTNQLSGELSVAMTEEGLLVTIANDVLFDSGSADIKPQYRNVAKKISNLLVMNPPRNIV 170
Query: 85 IEGHADELGSRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
I GH D + N+ A R + + YG+ P
Sbjct: 171 ISGHTDNVPINNAKFASNWELSVMRAVNFMKLLLENTKLDPQLFSAKGYGEFKPIASNAT 230
Query: 140 EDAYAKNRRAIVFLK 154
+ AKNRR + +
Sbjct: 231 PEGRAKNRRVEILIM 245
>gi|156973901|ref|YP_001444808.1| hypothetical protein VIBHAR_01611 [Vibrio harveyi ATCC BAA-1116]
gi|156525495|gb|ABU70581.1| hypothetical protein VIBHAR_01611 [Vibrio harveyi ATCC BAA-1116]
Length = 173
Score = 83.7 bits (205), Expect = 7e-15, Method: Composition-based stats.
Identities = 52/173 (30%), Positives = 83/173 (47%), Gaps = 22/173 (12%)
Query: 1 MQYST----IFIILSAITMMSISGIDNLDT----------------KISSPDTVLNESSL 40
MQ + + I + + M + S D+ + P+ L E L
Sbjct: 1 MQLNKVLKGLLIAIPVMAMTACSSSDDAASNTGAETNTGASETTVVTPIDPNGQLTEQEL 60
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSI 99
+EQ + +++F + +I ++L+ S+ + IEGHADE G+ +I
Sbjct: 61 KEQ-ALRETQTIYFAFDNSTIAGDYEEMLAAHASYLSKNPALKVTIEGHADERGTPEYNI 119
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
ALG RRA AV NY A G+ A ++ + SYG+E P + G E+ YAKNRRA++
Sbjct: 120 ALGERRAEAVSNYLQALGVQAEQISIVSYGEEKPLLLGQSEEVYAKNRRAVLV 172
>gi|153832533|ref|ZP_01985200.1| peptidoglycan-associated lipoprotein [Vibrio harveyi HY01]
gi|148871328|gb|EDL70200.1| peptidoglycan-associated lipoprotein [Vibrio harveyi HY01]
Length = 173
Score = 83.7 bits (205), Expect = 7e-15, Method: Composition-based stats.
Identities = 52/173 (30%), Positives = 83/173 (47%), Gaps = 22/173 (12%)
Query: 1 MQYST----IFIILSAITMMSISGIDNLDT----------------KISSPDTVLNESSL 40
MQ + + I + + M + S D+ + P+ L E L
Sbjct: 1 MQLNKVLKGLLIAIPVMAMTACSSSDDAASNTGAETNTGASETTVVTPIDPNGQLTEQEL 60
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSI 99
+EQ + +++F + +I ++L+ S+ + IEGHADE G+ +I
Sbjct: 61 KEQ-ALRETQTIYFAFDNSTIAGDYEEMLAAHASYLSKNPALKVTIEGHADERGTPEYNI 119
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
ALG RRA AV NY A G+ A ++ + SYG+E P + G E+ YAKNRRA++
Sbjct: 120 ALGERRAEAVSNYLQALGVQADQISIVSYGEEKPLLLGQSEEVYAKNRRAVLV 172
>gi|124008054|ref|ZP_01692753.1| peptidoglycan-associated cytoplasmic membrane protein, putative
[Microscilla marina ATCC 23134]
gi|123986468|gb|EAY26274.1| peptidoglycan-associated cytoplasmic membrane protein, putative
[Microscilla marina ATCC 23134]
Length = 563
Score = 83.7 bits (205), Expect = 7e-15, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 45/116 (38%), Gaps = 1/116 (0%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNS 97
+ + + + FD +S + + L + ++ I H D G+ +
Sbjct: 447 ESLKAYKKLIFSHLLFDYNSAKLDDKTLGYLQTIAQLLKKEPQLKLEISAHTDNHGTHDD 506
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L +RA AV + V G+ R+ YG+ P V +NRR + +
Sbjct: 507 NMNLSKQRAQAVKEFLVKAGVDVKRLSAKGYGETRPLVPNTTVANRERNRRVELKV 562
>gi|114800290|ref|YP_762003.1| OmpA family protein [Hyphomonas neptunium ATCC 15444]
gi|114740464|gb|ABI78589.1| OmpA family protein [Hyphomonas neptunium ATCC 15444]
Length = 211
Score = 83.7 bits (205), Expect = 7e-15, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 1/126 (0%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEG 87
+ T + +Q + ++ + F S I+PA Q L+++ + L ++ I G
Sbjct: 81 QTAGTGIEVERQGDQIALTMPSGISFQQGSAQIQPAFYQTLNDVAATLNEYPSTAVDIRG 140
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
HA G+R+ + L +RA AV +Y +G+ RM G + P E ++NR
Sbjct: 141 HASSEGARDFNQRLSQQRADAVRSYLTNQGVQGVRMSAVGMGIDYPVADNSTEAGRSQNR 200
Query: 148 RAIVFL 153
R + L
Sbjct: 201 RVEIIL 206
>gi|330951673|gb|EGH51933.1| OmpA/MotB [Pseudomonas syringae Cit 7]
Length = 271
Score = 83.7 bits (205), Expect = 7e-15, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 58/144 (40%), Gaps = 2/144 (1%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
++ + L + ++GD V FD ++ + + + + +
Sbjct: 123 AKLASAQQQGRWLEDQILSLATTETDRGLVMTLGD-VLFDAGHAELKNSASRTILKVVQF 181
Query: 76 LEKHDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
L+ + + IEG+ D G R ++ L RA AV + + GI R++V YG+E P
Sbjct: 182 LQINPRRVVRIEGYTDSTGDRQENLTLSKDRAQAVADVLMDLGIDEKRIQVEGYGQEFPV 241
Query: 135 VYGHDEDAYAKNRRAIVFLKGCRA 158
E A+NRR + +
Sbjct: 242 NANTSERGRAQNRRVEIVFSDEKG 265
>gi|149374667|ref|ZP_01892441.1| outer membrane protein; OmpA family [Marinobacter algicola DG893]
gi|149361370|gb|EDM49820.1| outer membrane protein; OmpA family [Marinobacter algicola DG893]
Length = 271
Score = 83.7 bits (205), Expect = 7e-15, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 52/127 (40%), Gaps = 2/127 (1%)
Query: 34 VLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADEL 92
+ ++GD V FD ++ + + L ++ E + +EG+ D
Sbjct: 140 AMQAEQTDRGMVLTLGD-VLFDLDKAELKSSGEATVRRLAEFMAEYENRRVRVEGYTDST 198
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
G + + L RRA AV + + GIS +R++ +G++ P +NRR +
Sbjct: 199 GEASYNQGLSERRAQAVSDTLIEMGISRTRVETKGFGEQFPVASNDTSGGRQQNRRVEIV 258
Query: 153 LKGCRAN 159
+ N
Sbjct: 259 ISDEEGN 265
>gi|298369467|ref|ZP_06980784.1| OmpA family protein [Neisseria sp. oral taxon 014 str. F0314]
gi|298282024|gb|EFI23512.1| OmpA family protein [Neisseria sp. oral taxon 014 str. F0314]
Length = 224
Score = 83.7 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 52/124 (41%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHA 89
+T + Q + ++V F T+S ++ L+ ++ D I GH
Sbjct: 89 ANTDVKVEQQGNQIKLVMPENVTFATNSATLSANARDALTAASKTLVQYPDTTLTINGHT 148
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GS + L RA +V ++ ++G++ SR+ +G P + A+NRR
Sbjct: 149 DNTGSDAINDPLSRNRAQSVASFLQSQGVAGSRLTTAGHGSRQPVASNATPEGRAQNRRV 208
Query: 150 IVFL 153
+ +
Sbjct: 209 EILI 212
>gi|237752179|ref|ZP_04582659.1| cadF [Helicobacter winghamensis ATCC BAA-430]
gi|229376421|gb|EEO26512.1| cadF [Helicobacter winghamensis ATCC BAA-430]
Length = 307
Score = 83.7 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 1/109 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVF 110
V F S + P + + ++++ +I GH D G+ + L RRA AV
Sbjct: 199 VQFPFDSSVVAPEYNAEIKDFAQSMKENPSQTAIISGHTDSTGNDEYNQKLSERRANAVK 258
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
+ + G+ A R++ YG+ P ++ +NRR + +N
Sbjct: 259 DAIIEEGVQAERLQAKGYGESKPIADNATKEGRQENRRVEAEIYTNSSN 307
>gi|146276274|ref|YP_001166433.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
17025]
gi|145554515|gb|ABP69128.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17025]
Length = 642
Score = 83.7 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 44/131 (33%), Gaps = 1/131 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGH 88
+ + G + F+ S I P+ L L + I GH
Sbjct: 475 EAALPTPQECMTRIRRVLAGQKITFEPGSAEIDPSARGTLDGLAEVFKDCKGMPLEISGH 534
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D GS + AL RA AV R + RMK YG+E P DE NRR
Sbjct: 535 TDSQGSEGGNKALSQARAEAVLMALQGRRVDVGRMKAVGYGEERPIADNRDEAGREANRR 594
Query: 149 AIVFLKGCRAN 159
L G N
Sbjct: 595 IEFTLLGDDGN 605
>gi|269119617|ref|YP_003307794.1| OmpA/MotB domain protein [Sebaldella termitidis ATCC 33386]
gi|268613495|gb|ACZ07863.1| OmpA/MotB domain protein [Sebaldella termitidis ATCC 33386]
Length = 179
Score = 83.7 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 33/178 (18%), Positives = 68/178 (38%), Gaps = 26/178 (14%)
Query: 1 MQYSTIFIILSAITMMSIS------------------GIDNLDTKISSPDTVLNESSLQE 42
M+ I ++L + + S + ++ ++ K + + N S +
Sbjct: 1 MK-KKIILLLFVLAVFSTARPFTTKQMRNDTIRINALEVEFVEEKAAVQEVKQNGSGEVK 59
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALG 102
+ + ++FD I+P +L + ++ D D +I G+ D G+ + L
Sbjct: 60 KIIRLNENKLYFDFDDSRIKPEYYGLLREMVEEIKAMDSDVIIRGYTDSKGTDEYNNRLS 119
Query: 103 LRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYG------HDEDAYAKNRRAIVFL 153
RRA +V + + G+ + R +K G+ P + A NRR + L
Sbjct: 120 QRRAESVRDKLIEFGLESGRVLKTEGMGERNPIAPNTNKDGSDNPAGRALNRRIELEL 177
>gi|126214998|emb|CAM35534.1| hypothetical protein [Pseudomonas fluorescens]
Length = 254
Score = 83.7 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 2/135 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD- 80
D D +I LN + GD V F T+ ++ + + ++ L +L +
Sbjct: 110 DARDAQIKQLQDSLNAKQTDRGTLVTFGD-VLFATNKSDLKSSGLVNITKLAQFLRDNPD 168
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++EG+ D GS + + +L RRA +V +G+ SR+ YGKE P
Sbjct: 169 RKVIVEGYTDSTGSDSYNQSLSERRAASVQRALAQQGVDISRIVTQGYGKEYPVADNGSV 228
Query: 141 DAYAKNRRAIVFLKG 155
A NRR V +
Sbjct: 229 SGRAMNRRVEVTISN 243
>gi|330973477|gb|EGH73543.1| OmpA/MotB [Pseudomonas syringae pv. aceris str. M302273PT]
Length = 271
Score = 83.7 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 57/144 (39%), Gaps = 2/144 (1%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
++ + L + ++GD V FD ++ + + + + +
Sbjct: 123 AKLASAQQQGRWLEDQILSLATTETDRGLVMTLGD-VLFDAGHAELKNSASRTILKVVQF 181
Query: 76 LEKHDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
L+ + + IEG+ D G R ++ L RA AV + + GI R+ V YG+E P
Sbjct: 182 LQINPRRVVRIEGYTDSTGDRQENLKLSKDRAQAVADVLMDLGIDEKRIHVEGYGQEFPV 241
Query: 135 VYGHDEDAYAKNRRAIVFLKGCRA 158
E A+NRR + +
Sbjct: 242 NANTSERGRAQNRRVEIVFSDEKG 265
>gi|126090250|ref|YP_001041705.1| OmpA/MotB domain-containing protein [Shewanella baltica OS155]
gi|125999881|gb|ABN63950.1| OmpA/MotB domain protein [Shewanella baltica OS155]
Length = 333
Score = 83.7 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 60/140 (42%), Gaps = 3/140 (2%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+ + + TV+ E+S Q SS +V + + + I+ L+ + L
Sbjct: 182 AAQPTLIKELSTPATKTVIVETSPQTLTFSSKSMNVIWGFDATKLSHDFIEQLAEVVEVL 241
Query: 77 EKHD---CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
+ L GHAD +GS + AL +RA V N + G+S ++++V G+ P
Sbjct: 242 NTYPQARVAVLAVGHADSIGSEAYNQALSEKRAQTVANKLLELGVSPAQIEVQGEGESHP 301
Query: 134 SVYGHDEDAYAKNRRAIVFL 153
D AKNRR V +
Sbjct: 302 VANNQTADGRAKNRRVEVSI 321
>gi|317491198|ref|ZP_07949634.1| peptidoglycan-associated lipoprotein [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316920745|gb|EFV42068.1| peptidoglycan-associated lipoprotein [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 171
Score = 83.7 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 50/170 (29%), Positives = 76/170 (44%), Gaps = 18/170 (10%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDT-------------VLNESSLQEQ 43
MQ + + + L + + + S N + S+ E + +
Sbjct: 1 MQLNKVLKGLMLALPIMAVAACSSHKNANDDQSAMGANAGNGMENGSSNLSSEEQARLQM 60
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIALG 102
+ V+F Y + Q+L + +EGHADE G+ +IALG
Sbjct: 61 QELQKNNIVYFGLDKYDVSSDYAQMLDAHAAFLRNNPSYKVTVEGHADERGTPEYNIALG 120
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
RRA AV Y +G+ A ++ + SYGKE P+V GHDE AYAKNRRA++
Sbjct: 121 ERRANAVKMYLQGKGVGADQISIVSYGKEKPAVLGHDEAAYAKNRRAVLV 170
>gi|220935190|ref|YP_002514089.1| OmpA/MotB domain-containing protein [Thioalkalivibrio sp. HL-EbGR7]
gi|219996500|gb|ACL73102.1| OmpA/MotB domain-containing protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 252
Score = 83.7 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 47/120 (39%), Gaps = 4/120 (3%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE----LGS 94
+ Q + + + F + S +R +LS+L L + +EGH D
Sbjct: 129 TTPGQVELRIKEGILFASGSAELRSDGRALLSSLMPVLNAAEGQITVEGHTDNVPIFTPI 188
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
S+ L RA V +A G++ R++ + P + A+NRR + ++
Sbjct: 189 FPSNWELSAARASGVVRQLIALGLAPERLQAVGFADTRPVAGNDTAEGRAENRRVSLVIQ 248
>gi|295675817|ref|YP_003604341.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
gi|295435660|gb|ADG14830.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
Length = 217
Score = 83.7 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 1/132 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF-L 84
+ + ++ SV FDTSSY+I+P VL L L+++
Sbjct: 80 SGATKGTGTQITEQPDGSLKLNIPSSVTFDTSSYAIKPTFAPVLDQLAQTLQQNPEVVAS 139
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+ GH D GS + L + RA +V Y RGI+ R+ T G P + E A
Sbjct: 140 VVGHTDNTGSLQYNQTLSVNRAQSVTGYLTQRGIAPQRLSATGMGPNQPIADNNTEAGRA 199
Query: 145 KNRRAIVFLKGC 156
NRR ++L+
Sbjct: 200 ANRRVEIYLRAT 211
>gi|28901041|ref|NP_800696.1| outer membrane protein OmpA [Vibrio parahaemolyticus RIMD 2210633]
gi|153837129|ref|ZP_01989796.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ3810]
gi|260362470|ref|ZP_05775403.1| outer membrane protein OmpA [Vibrio parahaemolyticus K5030]
gi|260879890|ref|ZP_05892245.1| outer membrane protein OmpA [Vibrio parahaemolyticus AN-5034]
gi|260894565|ref|ZP_05903061.1| outer membrane protein OmpA [Vibrio parahaemolyticus Peru-466]
gi|260900439|ref|ZP_05908834.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ4037]
gi|28809554|dbj|BAC62529.1| outer membrane protein OmpA [Vibrio parahaemolyticus RIMD 2210633]
gi|149749546|gb|EDM60292.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ3810]
gi|308086367|gb|EFO36062.1| outer membrane protein OmpA [Vibrio parahaemolyticus Peru-466]
gi|308092443|gb|EFO42138.1| outer membrane protein OmpA [Vibrio parahaemolyticus AN-5034]
gi|308107064|gb|EFO44604.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ4037]
gi|308113361|gb|EFO50901.1| outer membrane protein OmpA [Vibrio parahaemolyticus K5030]
Length = 329
Score = 83.7 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 41/101 (40%), Gaps = 1/101 (0%)
Query: 54 FDTSSYSIRPADIQVL-SNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F+ S + + + L + + E I G+ D G + L RRA AV +Y
Sbjct: 218 FEFDSAKLTESVSERLDNFVSFLNEYPQAQVEITGYTDSSGPAAYNQKLSERRAQAVADY 277
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
GI A R+ V G+E P + KNRR V +
Sbjct: 278 ITGAGIDADRLTVKGMGEENPVADNSTREGREKNRRVEVVV 318
>gi|315497454|ref|YP_004086258.1| ompa/motb domain protein [Asticcacaulis excentricus CB 48]
gi|315415466|gb|ADU12107.1| OmpA/MotB domain protein [Asticcacaulis excentricus CB 48]
Length = 222
Score = 83.7 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 53/125 (42%), Gaps = 1/125 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHA 89
T + + + ++ V F + S SI + VL+++ S L K+ I GHA
Sbjct: 94 AGTNVTVTRNGDNIILNMPSDVTFGSGSASIDASFYPVLNDVASILNKYPSTYVDIVGHA 153
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GS + L RA + Y +RG+ R+ V G P + AKNRR
Sbjct: 154 DSTGSDAINEPLSEDRANSTAAYLTSRGVVNQRLFVAGMGSRQPIASNATPEGRAKNRRV 213
Query: 150 IVFLK 154
+ L+
Sbjct: 214 EITLR 218
>gi|86609769|ref|YP_478531.1| OmpA family protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86558311|gb|ABD03268.1| OmpA family protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 243
Score = 83.7 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 54/142 (38%), Gaps = 4/142 (2%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
+ + I + +P L + Q S+ + FD IRP +L+ +
Sbjct: 101 SSTAAEIVPGEESTPAPTKTLTSFQVGTQT-ISLPGDLLFDFDKAEIRPEAASLLAQVAK 159
Query: 75 WLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI--SASRMKVTSYGKE 131
LE + GH D +G N ++AL LRRA AV +Y + +G
Sbjct: 160 SLEAMPGARVQVNGHTDNIGPLNYNLALSLRRANAVKDYLTKLLPEGHPISWTTSGFGPT 219
Query: 132 MPSVYGHDEDAYAKNRRAIVFL 153
+P E +NRR + +
Sbjct: 220 LPVADNDTEAGRQRNRRVDLVI 241
>gi|28897835|ref|NP_797440.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus RIMD
2210633]
gi|153838023|ref|ZP_01990690.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus
AQ3810]
gi|260361766|ref|ZP_05774791.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus
K5030]
gi|260876995|ref|ZP_05889350.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus
AN-5034]
gi|260899066|ref|ZP_05907507.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus
Peru-466]
gi|260900753|ref|ZP_05909148.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus
AQ4037]
gi|28806048|dbj|BAC59324.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus RIMD
2210633]
gi|149748557|gb|EDM59416.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus
AQ3810]
gi|308089146|gb|EFO38841.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus
Peru-466]
gi|308093872|gb|EFO43567.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus
AN-5034]
gi|308110189|gb|EFO47729.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus
AQ4037]
gi|308113254|gb|EFO50794.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus
K5030]
gi|328473192|gb|EGF44040.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus
10329]
Length = 174
Score = 83.7 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 23/174 (13%)
Query: 1 MQYST----IFIILSAITMMSISGIDNLDT-----------------KISSPDTVLNESS 39
MQ + + I L + M + S D+ + L E
Sbjct: 1 MQLNKVLKGLLIALPVMAMTACSSSDDAASNTGAATNNNAAAETTVATPIDQSGQLTEQE 60
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSS 98
L+EQ + +++F + +I ++L+ S+ + IEGHADE G+ +
Sbjct: 61 LKEQ-ALRETQTIYFAFDNSTIAGDYEEMLAAHASYLSKNPALKVTIEGHADERGTPEYN 119
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
IALG RRA AV NY A G+ A ++ + SYG+E P + G ++ YAKNRRA++
Sbjct: 120 IALGERRAQAVANYLQALGVQADQISIVSYGEEKPLLLGQSDEVYAKNRRAVLV 173
>gi|323706054|ref|ZP_08117624.1| OmpA/MotB domain protein [Thermoanaerobacterium xylanolyticum
LX-11]
gi|323534668|gb|EGB24449.1| OmpA/MotB domain protein [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 241
Score = 83.7 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 54/133 (40%), Gaps = 5/133 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
++ + F S+ D++ FDT S ++P + L +G+ L+ +EG+ D
Sbjct: 103 QNMVTYKVDERGFVISLNDTLLFDTGSADVKPDQKETLIKIGNILKSMPNYIRVEGYTDN 162
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ +S+ L + RA V V + +++ YG+ P V + N
Sbjct: 163 VPINNNQFHSNWELSVIRATNVVEILVNDVKMDPAKISAVGYGEYRPIVPNDSDKNRQLN 222
Query: 147 RRAIVFLKGCRAN 159
RR + + N
Sbjct: 223 RRVDIVIMNIDYN 235
>gi|146338272|ref|YP_001203320.1| Outer membrane lipoprotein omp16 [Bradyrhizobium sp. ORS278]
gi|146191078|emb|CAL75083.1| Outer membrane lipoprotein omp16 precursor
(peptidoglycan-associated lipoprotein) [Bradyrhizobium
sp. ORS278]
Length = 149
Score = 83.7 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 54/147 (36%), Positives = 79/147 (53%), Gaps = 3/147 (2%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQ 67
++ A++M + + D + Q+ F +VGD VFF++ + P I
Sbjct: 1 MLAVALSMGACANKSLTDANAMA--GGAAAPGSQQDFVVNVGDRVFFESDQTDLTPQAIA 58
Query: 68 VLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT 126
L WL+ + F IEGHADE G+R +IALG RRA +V N+ V+RGI SRM+
Sbjct: 59 TLEKQAQWLQSYPRYSFTIEGHADERGTREYNIALGARRAQSVRNFLVSRGIDQSRMRTI 118
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVFL 153
SYGKE P +D +++NRRA+ L
Sbjct: 119 SYGKERPVAVCNDISCWSQNRRAVTVL 145
>gi|124003367|ref|ZP_01688217.1| outer membrane protein [Microscilla marina ATCC 23134]
gi|123991465|gb|EAY30896.1| outer membrane protein [Microscilla marina ATCC 23134]
Length = 116
Score = 83.7 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYA 108
++VFF+ + Y+++ L NL +L+++ I GH D +G + + L +RA +
Sbjct: 6 NNVFFEYNKYALKDKSKVELDNLVKFLKENPEISGEISGHTDNIGDKARNRELSQQRANS 65
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V +Y V+ G+ ASR+ YG P+ E+ AKNRR +
Sbjct: 66 VRDYLVSHGVDASRLVYKGYGDSKPAATNDTEEGRAKNRRIEFKI 110
>gi|312127873|ref|YP_003992747.1| OmpA/MotB domain-containing protein [Caldicellulosiruptor
hydrothermalis 108]
gi|311777892|gb|ADQ07378.1| OmpA/MotB domain protein [Caldicellulosiruptor hydrothermalis 108]
Length = 257
Score = 83.7 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 44/121 (36%), Gaps = 7/121 (5%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR-- 95
+ S + D V FDT S + P V+ + + + + IEGH D +
Sbjct: 126 QEERGLSILLKD-VLFDTGSAKLTPQAKGVVHEIAKILEKVPNNNIRIEGHTDNVPIHNK 184
Query: 96 --NSSIALGLRRAYAV-FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
S+ L RA +V + R V YG+ P + A NRR +
Sbjct: 185 YFYSNWELSTARATSVLQEILRVSKVRPERFSVVGYGEYRPIASNKTPEGRALNRRVTIV 244
Query: 153 L 153
+
Sbjct: 245 I 245
>gi|296272285|ref|YP_003654916.1| OmpA/MotB domain-containing protein [Arcobacter nitrofigilis DSM
7299]
gi|296096460|gb|ADG92410.1| OmpA/MotB domain protein [Arcobacter nitrofigilis DSM 7299]
Length = 343
Score = 83.7 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 47/125 (37%), Gaps = 1/125 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHA 89
PDT+ + + + V F S I + + + IEGH
Sbjct: 218 PDTMRGANVDKVGCIKMLDLEVHFPIDSSIIDEKYKHRIKEFAEFLNKHPKLKATIEGHT 277
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G++ ++ L RRA + F + +R+K YG+ P ++ AKNRR
Sbjct: 278 DYTGTKKYNLWLSKRRANSAFEALKKYDVDPARLKTIGYGETRPIATNKTKEGRAKNRRI 337
Query: 150 IVFLK 154
+
Sbjct: 338 EATVS 342
>gi|83589323|ref|YP_429332.1| OmpA/MotB [Moorella thermoacetica ATCC 39073]
gi|83572237|gb|ABC18789.1| OmpA/MotB [Moorella thermoacetica ATCC 39073]
Length = 249
Score = 83.7 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 54/132 (40%), Gaps = 5/132 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ ++ + ++ + SV D+V F S + P +L +G L + +E
Sbjct: 103 QQEGLESQVTLNTEERGLVVSVADAVLFPKGSADLTPEARDLLRQVGRALARLPNYLRVE 162
Query: 87 GHADELGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDED 141
GH D L S+ L RA V ++ GI R+ T YG+ P + E
Sbjct: 163 GHTDNLPINTPAFPSNWELSTARATNVVKVLISEAGIKPERLSATGYGEYRPVAPNNSEA 222
Query: 142 AYAKNRRAIVFL 153
A+NRR + +
Sbjct: 223 DMARNRRVDIVV 234
>gi|308271860|emb|CBX28468.1| hypothetical protein N47_G37920 [uncultured Desulfobacterium sp.]
Length = 191
Score = 83.7 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 48/138 (34%), Positives = 76/138 (55%), Gaps = 3/138 (2%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
S++ D+L S+ + + E S E V + V FD S + + ++L ++L
Sbjct: 55 SLTDADSLKAGPSAQEKMAMEKS--EAMQKLVNEDVHFDYDSAVLSQSAQEILKKKAAYL 112
Query: 77 EKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
EK+ IEGH D+ G+ ++ALG +RA + N+ + GIS+SR+K SYG+E P
Sbjct: 113 EKYSAILVTIEGHCDDRGTNEYNLALGEKRAQSARNFLINLGISSSRIKTISYGEEKPLD 172
Query: 136 YGHDEDAYAKNRRAIVFL 153
++E A+AKNRRA L
Sbjct: 173 PANNEVAWAKNRRAHFIL 190
>gi|213963523|ref|ZP_03391776.1| inner membrane lipoprotein YiaD [Capnocytophaga sputigena Capno]
gi|213953803|gb|EEB65132.1| inner membrane lipoprotein YiaD [Capnocytophaga sputigena Capno]
Length = 229
Score = 83.7 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 4/136 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDS---VFFDTSSYSIRPADIQVLSNLGSWLEK 78
D KI + + + + ++ V+FDT+ Y+I Q L L + L++
Sbjct: 78 DKQAKKIEEEIPGADVKRVDDGIVVTFDENNGGVYFDTNKYNINEKSKQTLDKLAAILKE 137
Query: 79 HD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+ + L+ GH D +G ++ L RRA AV NYF ++G++ SR YG++ P
Sbjct: 138 YPDTNVLVAGHTDSVGKDEYNLGLSQRRAQAVTNYFKSKGLAGSRFTTKWYGEKNPIASN 197
Query: 138 HDEDAYAKNRRAIVFL 153
+ AKNRR V +
Sbjct: 198 DTAEGRAKNRRVNVVI 213
>gi|66045239|ref|YP_235080.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
gi|63255946|gb|AAY37042.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
Length = 271
Score = 83.7 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 57/144 (39%), Gaps = 2/144 (1%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
++ + L + ++GD V FD ++ + + + + +
Sbjct: 123 AKLASAQQQGRWLEDQILSLATTETDRGLVMTLGD-VLFDAGHAELKNSASRTILKVVQF 181
Query: 76 LEKHDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
L+ + + IEG+ D G R ++ L RA AV + + GI R+ V YG+E P
Sbjct: 182 LQINPRRVVRIEGYTDSTGDRQENLKLSKDRAQAVADVLMDLGIDEKRIHVEGYGQEFPV 241
Query: 135 VYGHDEDAYAKNRRAIVFLKGCRA 158
E A+NRR + +
Sbjct: 242 NANTSERGRAQNRRVEIVFSDEKG 265
>gi|330950708|gb|EGH50968.1| OmpA/MotB [Pseudomonas syringae Cit 7]
Length = 260
Score = 83.7 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 2/140 (1%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW- 75
+ + ++ D +I++ LN + + GD V FD + ++P + L +
Sbjct: 110 AKARLEARDAQIAALKNSLNAKQTERGTLVTFGD-VLFDYNKAELKPTAQGDIGKLAGFL 168
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
E D ++EG+ D GS + + +L RRA +V V G+ +R+ YGKE P
Sbjct: 169 QENPDRKVIVEGYTDSTGSASYNQSLSERRANSVRMALVRMGVDPARVVTMGYGKEYPVA 228
Query: 136 YGHDEDAYAKNRRAIVFLKG 155
A NRR V +
Sbjct: 229 DNSSNSGRAMNRRVEVTISN 248
>gi|149913423|ref|ZP_01901956.1| OmpA domain protein [Roseobacter sp. AzwK-3b]
gi|149812543|gb|EDM72372.1| OmpA domain protein [Roseobacter sp. AzwK-3b]
Length = 638
Score = 83.7 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 43/124 (34%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHA 89
E + S G + F+ S +I ++ ++ L + D I GH
Sbjct: 476 ASIPTPEKCEAKIASVQSGRKINFEPGSSTIDGNGAAIMDDIAEILRECGDIRIEIGGHT 535
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G + L RA AV N AR + S YG+ P E+ NRR
Sbjct: 536 DSQGREEMNERLSQERAQAVLNELRARRVLTSSFTAKGYGESQPIADNDTEEGREANRRI 595
Query: 150 IVFL 153
L
Sbjct: 596 EFRL 599
>gi|193212466|ref|YP_001998419.1| OmpA/MotB domain-containing protein [Chlorobaculum parvum NCIB
8327]
gi|193085943|gb|ACF11219.1| OmpA/MotB domain protein [Chlorobaculum parvum NCIB 8327]
Length = 232
Score = 83.7 bits (205), Expect = 9e-15, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 54/133 (40%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
D +I + + E + F T+S ++ P + NL D
Sbjct: 83 DKQAEEIRQEVGNADVERVGEGIRVVFDTGLLFSTNSSTLNPNSRYNIENLARVLNRYPD 142
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ ++EGH D +GS ++ L RRA +V + A G+ +R+ YG+ P E
Sbjct: 143 TNVVVEGHTDSIGSEATNQVLSERRAESVVSLLRAYGVYGNRLTAVGYGETRPVATNETE 202
Query: 141 DAYAKNRRAIVFL 153
+NRR V +
Sbjct: 203 MGRRQNRRVEVLI 215
>gi|169634041|ref|YP_001707777.1| putative outer membrane protein [Acinetobacter baumannii SDF]
gi|169152833|emb|CAP01862.1| putative outer membrane protein [Acinetobacter baumannii]
Length = 217
Score = 83.7 bits (205), Expect = 9e-15, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 59/146 (40%), Gaps = 1/146 (0%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
+L A + + + + + V + + S+ FDT+ +I+P
Sbjct: 68 VLGAAGGLYLDQKEKKLREQMAGTGVEVGRNPDGSVQLIMPGSITFDTNKSNIKPNFYAT 127
Query: 69 LSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
L + L + + L+ G+ D G+ + +I L RA +V NY +G+ +SR+
Sbjct: 128 LDKVAQTLAEDNKSAILVTGYTDNTGNDSINIPLSQARAQSVKNYLAGKGVPSSRIDAQG 187
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFL 153
YG P +NRR + +
Sbjct: 188 YGSSNPIADNSTASGREQNRRVEISI 213
>gi|242309709|ref|ZP_04808864.1| cadf [Helicobacter pullorum MIT 98-5489]
gi|239523710|gb|EEQ63576.1| cadf [Helicobacter pullorum MIT 98-5489]
Length = 308
Score = 83.7 bits (205), Expect = 9e-15, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVF 110
V F + S S+ P + + +++++ I GH D GS + L RRA +V
Sbjct: 202 VQFPSDSSSVNPEYYPEIQDFAEYMKQNPDKTATISGHTDSTGSEAYNQKLSERRAISVK 261
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V +GIS R+ YG+E P ++ NRR +
Sbjct: 262 EEIVKQGISPDRLDTKGYGEEKPIATNKTKEGRQANRRVEAEV 304
>gi|150019084|ref|YP_001311338.1| OmpA/MotB domain-containing protein [Clostridium beijerinckii NCIMB
8052]
gi|149905549|gb|ABR36382.1| OmpA/MotB domain protein [Clostridium beijerinckii NCIMB 8052]
Length = 251
Score = 83.3 bits (204), Expect = 9e-15, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 52/132 (39%), Gaps = 5/132 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE- 91
+ S + S DSVFF++ +I+P L ++ L D +EGH D
Sbjct: 113 GSVITSIQERGLIISFNDSVFFNSGQAAIKPDWQNKLISISKILNGIDNYIRVEGHTDNV 172
Query: 92 ---LGSRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+S+ L RA V + + + + R+ YG+ P E+ A NR
Sbjct: 173 VINTDYFHSNWQLSAVRASNVVEFLIYQGNVKPERLSSVGYGEYRPVKSNTTEEGKAANR 232
Query: 148 RAIVFLKGCRAN 159
R + + + N
Sbjct: 233 RVDIVILDTKFN 244
>gi|253575920|ref|ZP_04853254.1| OmpA/MotB domain-containing protein [Paenibacillus sp. oral taxon
786 str. D14]
gi|251844714|gb|EES72728.1| OmpA/MotB domain-containing protein [Paenibacillus sp. oral taxon
786 str. D14]
Length = 293
Score = 83.3 bits (204), Expect = 9e-15, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 53/133 (39%), Gaps = 6/133 (4%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
K +S + ++ + L + S ++ D FDT ++ + L+ L S + D IE
Sbjct: 155 KDNSLEDQIHVADLPQGISITLSDRFLFDTGKADLKSGSAKTLAKLASLFRQLDTVISIE 214
Query: 87 GHADELGSRN-----SSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDE 140
GH D L + L RA +V +FV + + + Y P+
Sbjct: 215 GHTDNLPIVYASEFKDNWELSGARALSVLRFFVDKEKLDPQQFQYAGYADTRPAADNDTP 274
Query: 141 DAYAKNRRAIVFL 153
+ KNRR + +
Sbjct: 275 EGRQKNRRVEITV 287
>gi|241206183|ref|YP_002977279.1| peptidoglycan-associated lipoprotein [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240860073|gb|ACS57740.1| peptidoglycan-associated lipoprotein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 177
Score = 83.3 bits (204), Expect = 9e-15, Method: Composition-based stats.
Identities = 50/156 (32%), Positives = 79/156 (50%), Gaps = 7/156 (4%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTVLNESSLQ------EQFSSSVGDSVFFDTSSYSI 61
++++ I ++++ + + + + + F+ +VGD +FFDT S SI
Sbjct: 20 VMIALIAGLALASCAKKPPNSAGDLGLGSGAGGAATPGSAQDFTVNVGDRIFFDTDSSSI 79
Query: 62 RPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA 120
R Q L W + +EGHADE G+R ++ALG RRA A +Y +RG+ A
Sbjct: 80 RADASQTLDRQAQWLGRYPNYQITVEGHADERGTREYNLALGARRAAAAKDYLASRGVPA 139
Query: 121 SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
R+K SYGKE P D +++NRRA+ L G
Sbjct: 140 QRLKTISYGKERPVAVCDDISCWSQNRRAVTVLGGA 175
>gi|254974362|ref|ZP_05270834.1| putative chemotaxis protein [Clostridium difficile QCD-66c26]
gi|255091756|ref|ZP_05321234.1| putative chemotaxis protein [Clostridium difficile CIP 107932]
gi|255313486|ref|ZP_05355069.1| putative chemotaxis protein [Clostridium difficile QCD-76w55]
gi|255516174|ref|ZP_05383850.1| putative chemotaxis protein [Clostridium difficile QCD-97b34]
gi|255649270|ref|ZP_05396172.1| putative chemotaxis protein [Clostridium difficile QCD-37x79]
gi|306519371|ref|ZP_07405718.1| putative chemotaxis protein [Clostridium difficile QCD-32g58]
Length = 246
Score = 83.3 bits (204), Expect = 9e-15, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 50/136 (36%), Gaps = 5/136 (3%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGH 88
+ ++ S+ D++ FDT ++ + +G L + + +EGH
Sbjct: 102 NGMANSVSLRVQDRGLVISLKDTILFDTGKAVVKDNSRDKIIQIGKMLNEMNSYMRVEGH 161
Query: 89 ADELGS----RNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVYGHDEDAY 143
D + S+ L + RA V + ++ YG+ P E+
Sbjct: 162 TDNMSIKNSEFKSNWDLSVMRATNVVQLLIDNAGIAPDKLSAVGYGEFRPIAENSSEEGR 221
Query: 144 AKNRRAIVFLKGCRAN 159
+KNRR + L + +
Sbjct: 222 SKNRRVDIVLVDSKYD 237
>gi|297568668|ref|YP_003690012.1| OmpA/MotB domain protein [Desulfurivibrio alkaliphilus AHT2]
gi|296924583|gb|ADH85393.1| OmpA/MotB domain protein [Desulfurivibrio alkaliphilus AHT2]
Length = 288
Score = 83.3 bits (204), Expect = 9e-15, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+ FD +++ A + L + + + D I+GH D GS ++ L RRA +V
Sbjct: 184 ILFDYDRATLQQASSKQLQGIVTLLHDHPDLRLEIQGHTDSDGSAAYNLQLSQRRAESVL 243
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
NY + GI SR+K YG+ MP + AKNRR +
Sbjct: 244 NYLLLFGIDPSRLKSKGYGETMPVAPNDTAENKAKNRRVELV 285
>gi|239908944|ref|YP_002955686.1| putative outer membrane protein [Desulfovibrio magneticus RS-1]
gi|239798811|dbj|BAH77800.1| putative outer membrane protein [Desulfovibrio magneticus RS-1]
Length = 345
Score = 83.3 bits (204), Expect = 9e-15, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 6/152 (3%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLN---ESSLQEQFSSSVG--DSVFFDTSSYSIRP 63
+L AI + L ++ + E +L E + S++FD Y+I+P
Sbjct: 192 VLKAIAALGKCNCIELGEELLRNEAAREKFLECALYEWIEDEIVVFRSIYFDFDKYNIKP 251
Query: 64 ADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASR 122
+ VL K ++EGH D +G+ ++ LG RRA +V +FV +GI ASR
Sbjct: 252 EFVPVLEEGTAIIKSKTGMKVILEGHTDSIGTEQYNMKLGQRRADSVKAFFVKKGIDASR 311
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
++ S+G+ P A NRR ++ K
Sbjct: 312 IETISFGESDPVATNKTAQGRALNRRCVIKFK 343
>gi|254253147|ref|ZP_04946465.1| Outer membrane protein [Burkholderia dolosa AUO158]
gi|124895756|gb|EAY69636.1| Outer membrane protein [Burkholderia dolosa AUO158]
Length = 182
Score = 83.3 bits (204), Expect = 9e-15, Method: Composition-based stats.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 14/166 (8%)
Query: 1 MQYSTIFIILSAITMMSISGI-------DNLDTKISSPDTV------LNESSLQEQFSSS 47
M + + + L+ + + +++ D + S +N L + S
Sbjct: 14 MMSNKVRLALAVMMIGALAACKSGVKLDDKANAGAVSTQPSADNVAQVNVDPLNDPNSPL 73
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRA 106
S++FD SYS++ +L +L+ H LI+G+ DE G+ ++ALG +RA
Sbjct: 74 AKRSIYFDFDSYSVKDEYQPLLQQHAQYLKSHPQRHVLIQGNTDERGTSEYNLALGQKRA 133
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
AV G++ S+M+ S GKE P GHDE ++A+NRRA +
Sbjct: 134 EAVRRALALLGVADSQMEAVSLGKEKPLATGHDEASWAQNRRADLV 179
>gi|126640934|ref|YP_001083918.1| putative outer membrane protein [Acinetobacter baumannii ATCC
17978]
gi|169796935|ref|YP_001714728.1| putative outer membrane protein [Acinetobacter baumannii AYE]
gi|184157155|ref|YP_001845494.1| outer membrane protein, related peptidoglycan-associated
(lipo)protein [Acinetobacter baumannii ACICU]
gi|213156662|ref|YP_002318323.1| OmpA/MotB domain protein [Acinetobacter baumannii AB0057]
gi|215484397|ref|YP_002326628.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter baumannii
AB307-0294]
gi|239503181|ref|ZP_04662491.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter baumannii
AB900]
gi|260555775|ref|ZP_05827995.1| type VI secretion system OmpA/MotB [Acinetobacter baumannii ATCC
19606]
gi|301347224|ref|ZP_07227965.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter baumannii
AB056]
gi|301512729|ref|ZP_07237966.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter baumannii
AB058]
gi|301597873|ref|ZP_07242881.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter baumannii
AB059]
gi|332853740|ref|ZP_08434952.1| OmpA family protein [Acinetobacter baumannii 6013150]
gi|332871140|ref|ZP_08439738.1| OmpA family protein [Acinetobacter baumannii 6013113]
gi|332874156|ref|ZP_08442080.1| OmpA family protein [Acinetobacter baumannii 6014059]
gi|126386818|gb|ABO11316.1| putative outer membrane protein [Acinetobacter baumannii ATCC
17978]
gi|169149862|emb|CAM87753.1| putative outer membrane protein [Acinetobacter baumannii AYE]
gi|183208749|gb|ACC56147.1| Outer membrane protein, related peptidoglycan-associated
(lipo)protein [Acinetobacter baumannii ACICU]
gi|213055822|gb|ACJ40724.1| OmpA/MotB domain protein [Acinetobacter baumannii AB0057]
gi|213988304|gb|ACJ58603.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter baumannii
AB307-0294]
gi|260410686|gb|EEX03984.1| type VI secretion system OmpA/MotB [Acinetobacter baumannii ATCC
19606]
gi|322507052|gb|ADX02506.1| Putative outer membrane protein [Acinetobacter baumannii 1656-2]
gi|323516919|gb|ADX91300.1| Outer membrane protein, related peptidoglycan-associated
(lipo)protein [Acinetobacter baumannii TCDC-AB0715]
gi|332728426|gb|EGJ59801.1| OmpA family protein [Acinetobacter baumannii 6013150]
gi|332731726|gb|EGJ63007.1| OmpA family protein [Acinetobacter baumannii 6013113]
gi|332737631|gb|EGJ68534.1| OmpA family protein [Acinetobacter baumannii 6014059]
Length = 217
Score = 83.3 bits (204), Expect = 9e-15, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 59/146 (40%), Gaps = 1/146 (0%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
+L A + + + + + V + + S+ FDT+ +I+P
Sbjct: 68 VLGAAGGLYLDQKEKKLREQMAGTGVEVGRNPDGSVQLIMPGSITFDTNKSNIKPNFYAT 127
Query: 69 LSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
L + L + + L+ G+ D G+ + +I L RA +V NY +G+ +SR+
Sbjct: 128 LDKVAQTLAEDNKSAILVTGYTDNTGNDSINIPLSQARAQSVKNYLAGKGVPSSRIDAQG 187
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFL 153
YG P +NRR + +
Sbjct: 188 YGSSNPIADNSTASGREQNRRVEISI 213
>gi|254475762|ref|ZP_05089148.1| OmpA/MotB [Ruegeria sp. R11]
gi|214030005|gb|EEB70840.1| OmpA/MotB [Ruegeria sp. R11]
Length = 219
Score = 83.3 bits (204), Expect = 9e-15, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 68/149 (45%), Gaps = 3/149 (2%)
Query: 8 IILSAITMMSISGIDNLDTKISSP--DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPAD 65
I+ +A + + +D + ++ + + + ++ S+ + + F T S +I PA
Sbjct: 67 IVGAAAGSVIGNQLDAQERELRQSISNDGITIVNTGDRLIVSLPNDLTFATDSSAISPAV 126
Query: 66 IQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
L+ + + + + + GH D GS + + AL RRA AV + A G+ +R+
Sbjct: 127 RSDLNKVAASLVRYPNSLVQVIGHTDSDGSASYNQALSERRANAVADQIQAGGVPYNRLA 186
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ G++ P + A+NRR + +
Sbjct: 187 IIGRGEDQPVASNLTPEGKARNRRVEIVV 215
>gi|156936052|ref|YP_001439968.1| hypothetical protein ESA_03946 [Cronobacter sakazakii ATCC BAA-894]
gi|156534306|gb|ABU79132.1| hypothetical protein ESA_03946 [Cronobacter sakazakii ATCC BAA-894]
Length = 411
Score = 83.3 bits (204), Expect = 9e-15, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 48/130 (36%), Gaps = 4/130 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+ ++ + F ++S +R V+ + + L+ G++D +
Sbjct: 271 VAVRDEADRSVVILKGDGLFASASTVVRGRYEPVIDRVAQAMNNVSGKILVVGYSDNVPI 330
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
S+ L L RA +V A +R+K G+ P + + A+NRR
Sbjct: 331 RSARFASNYELSLARAESVQKMLQAHLADPNRVKAQGRGEMDPIAPNNTPENRARNRRVE 390
Query: 151 VFLKGCRANT 160
+ L NT
Sbjct: 391 ITLLVSPDNT 400
>gi|313902670|ref|ZP_07836069.1| OmpA/MotB domain protein [Thermaerobacter subterraneus DSM 13965]
gi|313467108|gb|EFR62623.1| OmpA/MotB domain protein [Thermaerobacter subterraneus DSM 13965]
Length = 364
Score = 83.3 bits (204), Expect = 9e-15, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 45/130 (34%), Gaps = 5/130 (3%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGH 88
+ + + + D VFFD +RP +L L L + L+EGH
Sbjct: 214 AGLGGRASARLTERGVAIIFDDQVFFDLGRAELRPEGRDLLRRLAPILAQVPGTILVEGH 273
Query: 89 ADELGS----RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAY 143
D L S+ L RA V Y + R+ YG+ P
Sbjct: 274 TDNLPIRSGRYPSNWELSTARATTVVRYLAEQAGLDPRRLAAAGYGEWRPRYPNTSAANR 333
Query: 144 AKNRRAIVFL 153
A+NRR + L
Sbjct: 334 ARNRRVEIVL 343
>gi|188586029|ref|YP_001917574.1| OmpA/MotB domain protein [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179350716|gb|ACB84986.1| OmpA/MotB domain protein [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 269
Score = 83.3 bits (204), Expect = 9e-15, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 52/132 (39%), Gaps = 5/132 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ + V+ + + D + FD+ +R +++L ++ LE+ + +E
Sbjct: 111 EDADLAEVVMLETEERGIVIRFQDKILFDSGRAELRSESLEILGDIAEILEEIPNEIKVE 170
Query: 87 GHADELGS----RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDED 141
G D++ S+ L RA V Y G R++ T YG+ P V +
Sbjct: 171 GFTDDVPIDTPEFPSNWELSAARATTVLRYLSEEGGLDPGRLQATGYGEYRPMVPNDSPE 230
Query: 142 AYAKNRRAIVFL 153
NRR + +
Sbjct: 231 NRQLNRRVDITV 242
>gi|127511841|ref|YP_001093038.1| OmpA/MotB domain-containing protein [Shewanella loihica PV-4]
gi|126637136|gb|ABO22779.1| OmpA/MotB domain protein [Shewanella loihica PV-4]
Length = 224
Score = 83.3 bits (204), Expect = 9e-15, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 54/135 (40%), Gaps = 1/135 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
+ + + T ++ + + ++ + V F + VL ++ +++D
Sbjct: 85 VQEAELRKQLQSTGVSVTRNGDNIILNMPNEVTFGVDQSVLSSRAKNVLDSVALVAKEYD 144
Query: 81 -CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ G D GS + ++ L RA V NY ++R I + R+ G+ P
Sbjct: 145 ETMLNVMGFTDSSGSESYNLRLSQVRAAEVANYLMSREIKSQRISSVGMGESRPIADNST 204
Query: 140 EDAYAKNRRAIVFLK 154
+ A+NRR + L
Sbjct: 205 QQGRAQNRRVEIVLS 219
>gi|296137072|ref|YP_003644314.1| OmpA/MotB domain protein [Thiomonas intermedia K12]
gi|294341249|emb|CAZ89650.1| putative OmpA family protein [Thiomonas sp. 3As]
gi|295797194|gb|ADG31984.1| OmpA/MotB domain protein [Thiomonas intermedia K12]
Length = 226
Score = 83.3 bits (204), Expect = 9e-15, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 49/133 (36%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
D +S V + + +V F T S + P +L +L + +
Sbjct: 88 DLQAQAQASGTGVQVTQTQDNRLKMNVPADAGFATGSAQLNPRMYPILESLATGLNQNPS 147
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ G D G+ + L RA V N+ V+RG++ R+ G + P
Sbjct: 148 ETVQVFGFTDNTGTDAINYPLSENRALTVKNFLVSRGVAPQRVTTQGLGPQNPVASNATA 207
Query: 141 DAYAKNRRAIVFL 153
A NRR +++
Sbjct: 208 QGRAANRRVEIYV 220
>gi|237800117|ref|ZP_04588578.1| ompA family protein [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331022973|gb|EGI03030.1| ompA family protein [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 260
Score = 83.3 bits (204), Expect = 9e-15, Method: Composition-based stats.
Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 2/140 (1%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW- 75
+ + +D D +I++ LN + + GD V FD + ++P + L S+
Sbjct: 110 AKARLDARDAQIAALKNSLNAKQTERGTLVTFGD-VLFDYNKADLKPTAQGDIGKLASFL 168
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
E D ++EG+ D GS + + +L RRA +V V G+ +R+ YGKE P
Sbjct: 169 QENPDRKVIVEGYTDSTGSASYNQSLSERRANSVRMALVRMGVDPARVVTMGYGKEYPVA 228
Query: 136 YGHDEDAYAKNRRAIVFLKG 155
A NRR V +
Sbjct: 229 DNTSNSGRAMNRRVEVTISN 248
>gi|239827803|ref|YP_002950427.1| flagellar motor protein MotB [Geobacillus sp. WCH70]
gi|239808096|gb|ACS25161.1| OmpA/MotB domain protein [Geobacillus sp. WCH70]
Length = 251
Score = 83.3 bits (204), Expect = 9e-15, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 46/128 (35%), Gaps = 6/128 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+ L S E + ++ + + FD+ S +RP D ++ + + + +I GH D
Sbjct: 115 NGKLQTSLTDEGLAITILNDILFDSGSAEVRPKDRKLAKEISQLLVMNPPRNIIISGHTD 174
Query: 91 ELGSRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ N+ A R + + YG+ P + + K
Sbjct: 175 NVPIHNAQFASNWELSVMRAINFMKILLENPELDPRWFSAKGYGEFKPVAPNNTPEGRMK 234
Query: 146 NRRAIVFL 153
NRR + +
Sbjct: 235 NRRVEILI 242
>gi|260595859|ref|YP_003208430.1| hypothetical protein CTU_00670 [Cronobacter turicensis z3032]
gi|260215036|emb|CBA26725.1| hypothetical protein CTU_00670 [Cronobacter turicensis z3032]
Length = 380
Score = 83.3 bits (204), Expect = 9e-15, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 48/130 (36%), Gaps = 4/130 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+ ++ + F ++S +R V+ + + L+ G++D +
Sbjct: 240 VAVRDEADRSVVILKGDGLFASASTVVRDRYEPVIDRVAQAMNNVSGKILVVGYSDNVPI 299
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
S+ L L RA +V A SR++ G+ P + + A+NRR
Sbjct: 300 RSARFASNYELSLSRAESVQKMLQAHLADPSRVRAQGRGEMDPIAPNNTPENRARNRRVE 359
Query: 151 VFLKGCRANT 160
+ L NT
Sbjct: 360 ITLLVSPDNT 369
>gi|304317567|ref|YP_003852712.1| OmpA/MotB domain protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779069|gb|ADL69628.1| OmpA/MotB domain protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 240
Score = 83.3 bits (204), Expect = 9e-15, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 56/138 (40%), Gaps = 5/138 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
K ++ ++ + F S+ D++ FDT S ++P L +G+ L+ +E
Sbjct: 97 KQNNLQNMVTYKVDERGFVISLNDTLLFDTGSADVKPDQKATLIKIGNILKAMPNYIRVE 156
Query: 87 GHADELGS----RNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDED 141
G+ D + +S+ L + RA V V I +++ YG+ P V +
Sbjct: 157 GYTDNVPINNSQFHSNWELSVIRATNVVEILVNDVKIDPAKISAVGYGEYRPIVPNDSDK 216
Query: 142 AYAKNRRAIVFLKGCRAN 159
NRR + + N
Sbjct: 217 NRQLNRRVDIVIMNSDYN 234
>gi|268680520|ref|YP_003304951.1| OmpA/MotB domain protein [Sulfurospirillum deleyianum DSM 6946]
gi|268618551|gb|ACZ12916.1| OmpA/MotB domain protein [Sulfurospirillum deleyianum DSM 6946]
Length = 335
Score = 83.3 bits (204), Expect = 9e-15, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 58/130 (44%), Gaps = 4/130 (3%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD- 80
D+ D ++P + + + + + V FD ++PA + + + +++++
Sbjct: 204 DDKDKCPNTPKGTVVD---VDGCTKIIRLHVKFDFDKSVVKPAFMPEIQKVADFMKQNPG 260
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++EGH D GS + L RA AV G++A+++ +YG+ P E
Sbjct: 261 YSVVLEGHTDSKGSDAYNQKLSDSRAKAVAKALSNLGVAAAKVTTEAYGESKPVATNDTE 320
Query: 141 DAYAKNRRAI 150
A+NRR
Sbjct: 321 AGRAENRRVD 330
>gi|115375600|ref|ZP_01462857.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
gi|310823151|ref|YP_003955509.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
gi|115367376|gb|EAU66354.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
gi|309396223|gb|ADO73682.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
Length = 249
Score = 83.3 bits (204), Expect = 9e-15, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 48/102 (47%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
+ V F + S+ LS L ++ ++GHADE G+ ++ L RA AV
Sbjct: 146 EPVGFGFNEASLSSEAQSRLSALADCIKASSGRITLQGHADERGTEEYNLQLSNSRASAV 205
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
Y G+ A+R+ YG+ P DE+A+A+NRR
Sbjct: 206 KRYLTTLGVPANRLATVGYGETRPLNSASDEEAWAQNRRVEF 247
>gi|260682442|ref|YP_003213727.1| putative chemotaxis protein [Clostridium difficile CD196]
gi|260686041|ref|YP_003217174.1| putative chemotaxis protein [Clostridium difficile R20291]
gi|260208605|emb|CBA61322.1| putative chemotaxis protein [Clostridium difficile CD196]
gi|260212057|emb|CBE02637.1| putative chemotaxis protein [Clostridium difficile R20291]
Length = 248
Score = 83.3 bits (204), Expect = 9e-15, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 50/136 (36%), Gaps = 5/136 (3%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGH 88
+ ++ S+ D++ FDT ++ + +G L + + +EGH
Sbjct: 104 NGMANSVSLRVQDRGLVISLKDTILFDTGKAVVKDNSRDKIIQIGKMLNEMNSYMRVEGH 163
Query: 89 ADELGS----RNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVYGHDEDAY 143
D + S+ L + RA V + ++ YG+ P E+
Sbjct: 164 TDNMSIKNSEFKSNWDLSVMRATNVVQLLIDNAGIAPDKLSAVGYGEFRPIAENSSEEGR 223
Query: 144 AKNRRAIVFLKGCRAN 159
+KNRR + L + +
Sbjct: 224 SKNRRVDIVLVDSKYD 239
>gi|188025753|ref|ZP_02959682.2| hypothetical protein PROSTU_01567 [Providencia stuartii ATCC 25827]
gi|188020355|gb|EDU58395.1| hypothetical protein PROSTU_01567 [Providencia stuartii ATCC 25827]
Length = 175
Score = 83.3 bits (204), Expect = 9e-15, Method: Composition-based stats.
Identities = 49/163 (30%), Positives = 82/163 (50%), Gaps = 12/163 (7%)
Query: 1 MQYSTIF----IILSAITMMSISG-----IDNLDTKISSPDTVLNESSLQEQFSSSV--G 49
MQ + + I L + + + S + D+ ++ ++ L+ L Q +
Sbjct: 11 MQLNKVLKGLMIALPIMAVAACSSNKNNDQNGADSSMNQTNSGLSAEELARQQMQELQNN 70
Query: 50 DSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
+ V+F Y++ P +L + ++EGHADE G+ +IALG RRA A
Sbjct: 71 NIVYFGFDKYNVSPEYADMLDAHAAFLRNNPSVKVVVEGHADERGTPEYNIALGERRANA 130
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
V Y ++G++ ++ + SYGKE P+V GH E YAKNRRA++
Sbjct: 131 VKMYLQSKGVAGDQVSLVSYGKEKPAVLGHTEADYAKNRRAVI 173
>gi|77360808|ref|YP_340383.1| required for outer membrane integrity, uptake of group A colicins,
and translocation of phage DNA [Pseudoalteromonas
haloplanktis TAC125]
gi|76875719|emb|CAI86940.1| required for outer membrane integrity, uptake of group A colicins,
and translocation of phage DNA [Pseudoalteromonas
haloplanktis TAC125]
Length = 180
Score = 83.3 bits (204), Expect = 9e-15, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 77/179 (43%), Gaps = 27/179 (15%)
Query: 1 MQYSTIF----IILSAITMMSISG----------------------IDNLDTKISSPDTV 34
MQ + I I + + + + S D ++ SP+
Sbjct: 1 MQLNKILKGLLIAVPVMALAACSSSSDIDEGAANQSNQGMVEQSTNTDTVEVATISPEQR 60
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELG 93
E Q+ + ++FD ++ +L + ++ LIEGHADE G
Sbjct: 61 AEEQLRQKYEALRQEQVIYFDFDKATVEGKYADLLRAHAEFLVQNSSVKVLIEGHADERG 120
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ +IALG R AV Y + G+SAS+M V SYG+E P V E A+AKNRRA++
Sbjct: 121 TPEYNIALGEHRGQAVEKYLQSLGVSASQMSVVSYGEEKPMVKSRTESAFAKNRRAVLV 179
>gi|323495403|ref|ZP_08100480.1| outer membrane protein OmpA [Vibrio brasiliensis LMG 20546]
gi|323310326|gb|EGA63513.1| outer membrane protein OmpA [Vibrio brasiliensis LMG 20546]
Length = 322
Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 51/113 (45%), Gaps = 1/113 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIA 100
+ F + + DS F +S ++ +L L ++ + + I G+ D G+ +
Sbjct: 203 KTFETKLVDSGSFALNSSELKEESKSILDELVQFMNQYPQANVEITGYTDSSGAAAYNQK 262
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L +RA +V N + GI +SR+ V+ G+ P + +NRR + +
Sbjct: 263 LSEKRAQSVANALESEGIDSSRITVSGEGENNPIASNETREGREQNRRVEIVV 315
>gi|253996642|ref|YP_003048706.1| OmpA/MotB domain-containing protein [Methylotenera mobilis JLW8]
gi|253983321|gb|ACT48179.1| OmpA/MotB domain protein [Methylotenera mobilis JLW8]
Length = 271
Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 54/144 (37%), Gaps = 5/144 (3%)
Query: 15 MMSISGIDNLDT-KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
M+ +G++ + + + + D++ F S + P ++S +
Sbjct: 108 SMAKTGVEVSNKLAPMINEGKIQVIQTSRGIRIDIQDNLLFGAGSADLSPTANAIISEIV 167
Query: 74 SWLEKHDCDFLIEGHADELG----SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
++ + +EGH D + S+ L RA +V A GIS R+ T G
Sbjct: 168 PLIKDNQRKIQVEGHTDNTPIHNATFFSNWELSAVRASSVVRLLSALGISEQRLSATGLG 227
Query: 130 KEMPSVYGHDEDAYAKNRRAIVFL 153
P E AKNRR + +
Sbjct: 228 ASQPISENESEAGRAKNRRVSIII 251
>gi|229588770|ref|YP_002870889.1| putative lipoprotein [Pseudomonas fluorescens SBW25]
gi|229360636|emb|CAY47494.1| putative lipoprotein [Pseudomonas fluorescens SBW25]
Length = 261
Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 2/135 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD- 80
D D +I LN + GD V F T+ ++ + + ++ L +L +
Sbjct: 115 DARDAQIKQLQDSLNAKQTDRGTLVTFGD-VLFATNKSDLKSSGLVNITKLAQFLRDNPD 173
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++EG+ D GS + + +L RRA +V +G+ SR+ YGKE P
Sbjct: 174 RKVIVEGYTDSTGSDSYNQSLSERRAASVQRALAQQGVDISRIVTQGYGKEYPVADNGSV 233
Query: 141 DAYAKNRRAIVFLKG 155
A NRR V +
Sbjct: 234 SGRAMNRRVEVTISN 248
>gi|226951234|ref|ZP_03821698.1| OmpA/MotB domain-containing protein [Acinetobacter sp. ATCC 27244]
gi|226838028|gb|EEH70411.1| OmpA/MotB domain-containing protein [Acinetobacter sp. ATCC 27244]
Length = 213
Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 53/128 (41%), Gaps = 1/128 (0%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLI 85
+ V + + S+ FDT+ +I+P L+ + E + L+
Sbjct: 82 QQMQGTGVDVGRNPDGSVQLIMPGSITFDTNKSNIKPNFYATLNKVAQVLGEDNQSAILV 141
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
G+ D G+ + +I L RA +V NY +GI+++R+ YG P +
Sbjct: 142 TGYTDNTGNDSINIPLSQARAQSVKNYLAGKGIASNRIDAQGYGSSNPIADNSTAAGREQ 201
Query: 146 NRRAIVFL 153
NRR + +
Sbjct: 202 NRRVEISI 209
>gi|254488141|ref|ZP_05101346.1| peptidoglycan-associated lipoprotein [Roseobacter sp. GAI101]
gi|214045010|gb|EEB85648.1| peptidoglycan-associated lipoprotein [Roseobacter sp. GAI101]
Length = 171
Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 54/167 (32%), Positives = 83/167 (49%), Gaps = 12/167 (7%)
Query: 1 MQ-YSTIFIILSAITMMSISGIDNLDTKISSPDTV----------LNESSLQEQFSSSVG 49
M T ++++A+ + + + D + N+ S F +VG
Sbjct: 1 MNRILTSTLLIAALAVSACTNPDRFGADGMNGGGTMAPGGMIPGSANDPSSTAYFQQAVG 60
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
D V F+ + ++ PA L +W + D +IEGHADE G+R ++ALG RRA A
Sbjct: 61 DRVLFEVNQSNLTPAGQATLDGQATWLITNIDYQAIIEGHADEQGTREYNVALGARRANA 120
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
Y ++RG++ +R++V SYGKE P E YAKNRRA+ L G
Sbjct: 121 AREYLISRGVAGNRLRVVSYGKERPIEVCSAEACYAKNRRAVTVLAG 167
>gi|329935272|ref|ZP_08285238.1| hypothetical protein SGM_6755 [Streptomyces griseoaurantiacus M045]
gi|329305095|gb|EGG48954.1| hypothetical protein SGM_6755 [Streptomyces griseoaurantiacus M045]
Length = 218
Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 28/145 (19%), Positives = 54/145 (37%), Gaps = 1/145 (0%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQ 67
+ L+ ++ + + ++ + + E + ++ V F S + P
Sbjct: 55 LKLADGATLAAAKVLDIKSVVEDLGGEERREDTNENVTFALQAEVLFPKDSPKLNPEARS 114
Query: 68 VLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT 126
+ + ++K + + G D LGS + L RRA AV + +R +V
Sbjct: 115 RIDAIAEEIKKQNAQAVRVFGFTDNLGSYAHGLVLSKRRAEAVHDELASRLDGDVTFEVR 174
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIV 151
Y ++ P E KNRR V
Sbjct: 175 GYSEDYPIADNTSEQGRRKNRRVEV 199
>gi|251777807|ref|ZP_04820727.1| putative chemotaxis MotB protein [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|243082122|gb|EES48012.1| putative chemotaxis MotB protein [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 244
Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 53/133 (39%), Gaps = 5/133 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ ++ + S D+VFF++ +I+ Q L ++ L D +EG+ D
Sbjct: 104 EGSVSTQIQERGLIISFNDNVFFNSGDATIKNEYKQKLISISKILNNIDNYIRVEGNTDN 163
Query: 92 ----LGSRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ +S+ L RA V V IS+ ++ YG+ P ED A N
Sbjct: 164 VAINTENFHSNWQLSAIRAANVVELLVKEGNISSDKLSAIGYGEYRPVKSNDTEDGRAAN 223
Query: 147 RRAIVFLKGCRAN 159
RR + + N
Sbjct: 224 RRVDIVILNNEYN 236
>gi|213963452|ref|ZP_03391706.1| OmpA family protein [Capnocytophaga sputigena Capno]
gi|213953860|gb|EEB65188.1| OmpA family protein [Capnocytophaga sputigena Capno]
Length = 454
Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 58/128 (45%), Gaps = 1/128 (0%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDF 83
+ +S + + + +S ++ FD + +IRP VL+N+ + + + F
Sbjct: 323 EAGPASNNGCPEVTQEVQTQLNSFAKTILFDVNKATIRPESATVLNNIVNVLNKYKNAKF 382
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
IEG+ D G++ + L RAY+V Y + +GI +R+ +G E P +
Sbjct: 383 SIEGYTDTSGNKAKNQKLSEDRAYSVKAYLIDKGIDQARLTAKGFGPEKPIASNKTKKGR 442
Query: 144 AKNRRAIV 151
NRR +
Sbjct: 443 ELNRRVEI 450
>gi|254302748|ref|ZP_04970106.1| outer membrane protein OmpF [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148322940|gb|EDK88190.1| outer membrane protein OmpF [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 182
Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALG 102
S+ + + FD Y+++ LS L E D I+G+ D +G+ ++ L
Sbjct: 69 LILSMPELILFDFDKYAVKDGIKPSLSTLAKALGENKDIHIKIDGYTDFIGTEAYNLDLS 128
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
++RA A+ ++ +++G S + + YG++ P+ E +KNRR +
Sbjct: 129 VKRARAIKDFLISKGAIGSNISIEGYGEQNPAATNQTEAGRSKNRRVEFIIS 180
>gi|39998119|ref|NP_954070.1| chemotaxis MotB protein [Geobacter sulfurreducens PCA]
gi|39985064|gb|AAR36420.1| chemotaxis MotB protein [Geobacter sulfurreducens PCA]
Length = 266
Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 53/138 (38%), Gaps = 8/138 (5%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGH 88
+N + S+ ++ FFD+ S ++ + +L+ + L + +EGH
Sbjct: 123 QGAQDKVNVGINRRGLVVSLKEAGFFDSGSAIVKESAYPLLAKVAESLSAYSNPVRVEGH 182
Query: 89 ADELGS----RNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAY 143
D + S+ L RA + ++ + + +G+ P + +
Sbjct: 183 TDTMPISSVQFPSNWELSTARATNIVHFLTRSYDFDPGAISAAGFGEYRPIADNNTAEGR 242
Query: 144 AKNRRAIVFL---KGCRA 158
+KNRR + L +G R
Sbjct: 243 SKNRRVDIVLLSGEGERG 260
>gi|298507057|gb|ADI85780.1| chemotaxis MotB protein [Geobacter sulfurreducens KN400]
Length = 266
Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 53/138 (38%), Gaps = 8/138 (5%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGH 88
+N + S+ ++ FFD+ S ++ + +L+ + L + +EGH
Sbjct: 123 QGAQDKVNVGINRRGLVVSLKEAGFFDSGSAIVKESAYPLLAKVAESLSAYSNPVRVEGH 182
Query: 89 ADELGS----RNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAY 143
D + S+ L RA + ++ + + +G+ P + +
Sbjct: 183 TDTMPISSAQFPSNWELSTARATNIVHFLTRSYDFDPGAISAAGFGEYRPIADNNTAEGR 242
Query: 144 AKNRRAIVFL---KGCRA 158
+KNRR + L +G R
Sbjct: 243 SKNRRVDIVLLSGEGERG 260
>gi|262404553|ref|ZP_06081108.1| outer membrane protein A precursor [Vibrio sp. RC586]
gi|262349585|gb|EEY98723.1| outer membrane protein A precursor [Vibrio sp. RC586]
Length = 321
Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 1/105 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
DS F +S ++PA L L + + + GH D GS + L +RA A
Sbjct: 208 DSGTFANNSAQLKPAMESKLDKLVGYLKQYPQATVEVVGHTDSTGSDAYNQKLSEKRAQA 267
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V A+GI ASR+ G+ P + KNRR + +
Sbjct: 268 VAKALEAQGIEASRITAKGQGESNPIASNATAEGREKNRRVELVI 312
>gi|218778089|ref|YP_002429407.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01]
gi|218759473|gb|ACL01939.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01]
Length = 377
Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 47/121 (38%), Gaps = 1/121 (0%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADE 91
+ + + + + FD SY I+ + + ++EGH D
Sbjct: 254 PGTPKGADVNKVGCWIIKDLEFDFDSYEIKKEYQSCIKKIVAILRANPGLKLIVEGHTDN 313
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
GS+ + L L RA AV + V +GI R+ YG P E+ A+NRR +
Sbjct: 314 KGSKAYNDKLSLNRADAVIDSMVGKGIMPERLSAKGYGFSKPVASNDTEEGRARNRRVQL 373
Query: 152 F 152
Sbjct: 374 T 374
>gi|146283087|ref|YP_001173240.1| OmpA family protein [Pseudomonas stutzeri A1501]
gi|145571292|gb|ABP80398.1| OmpA family protein [Pseudomonas stutzeri A1501]
gi|327481439|gb|AEA84749.1| OmpA family protein [Pseudomonas stutzeri DSM 4166]
Length = 260
Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 54/134 (40%), Gaps = 2/134 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
+ + +I + + + GD V FD ++P ++ + L + + +
Sbjct: 115 EAREAQIRKLQEDMQAKQTERGTLVTFGD-VLFDYDRAELKPGGMRSVQKLADFLNDNPE 173
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++EG+ D GS + L RRA AV V G+ R+ YGKE P D
Sbjct: 174 RKVIVEGYTDSTGSAEYNQRLSERRADAVRMALVKMGVDPQRIVSQGYGKEYPVASNSDS 233
Query: 141 DAYAKNRRAIVFLK 154
A NRR V +
Sbjct: 234 AGRAMNRRVEVTIS 247
>gi|269104382|ref|ZP_06157078.1| outer membrane protein A precursor [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268161022|gb|EEZ39519.1| outer membrane protein A precursor [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 335
Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 46/124 (37%), Gaps = 3/124 (2%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHA 89
+ V + + +V F S SI D L L++ D + G+
Sbjct: 198 AEPVYVDQVSVATLEE-LKLAVPFAFDSSSISTGDAAKLVPFEQRLQEQDAAQIYVVGYT 256
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D GS + L RRA AV + A + SR+ G+ P E+ A+NRR
Sbjct: 257 DSKGSEAYNQKLSERRADAVADALRAHLNVDGSRIIAEGRGEADPVASNQTEEGRAQNRR 316
Query: 149 AIVF 152
+
Sbjct: 317 VEIV 320
>gi|163740474|ref|ZP_02147868.1| OmpA domain protein [Phaeobacter gallaeciensis 2.10]
gi|161386332|gb|EDQ10707.1| OmpA domain protein [Phaeobacter gallaeciensis 2.10]
Length = 216
Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 66/149 (44%), Gaps = 3/149 (2%)
Query: 8 IILSAITMMSISGIDNLDTKISSP--DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPAD 65
++ +A + + +D + ++ + ++ + ++ S+ + + F T S ++ PA
Sbjct: 63 LVGAAAGSVIGNQLDAQERELRQSISNDGISIVNTGDRLIVSLPNDLTFATDSAAVSPAV 122
Query: 66 IQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
L+ + S + + + GH D G + L RRA AV + A G+ +R++
Sbjct: 123 RSDLNKVASSLVRYPNSQVQVIGHTDSDGDAGYNQGLSERRANAVADQIQAGGVPYNRVQ 182
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ G+ P + A+NRR + +
Sbjct: 183 IIGRGESQPVASNLTAEGKARNRRVEIVV 211
>gi|78221563|ref|YP_383310.1| thrombospondin type 3 repeat-containing OmpA/MotB protein
[Geobacter metallireducens GS-15]
gi|78192818|gb|ABB30585.1| Thrombospondin type 3 repeat:OmpA/MotB [Geobacter metallireducens
GS-15]
Length = 447
Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 55/131 (41%), Gaps = 3/131 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD- 80
D LD +P + + + + V FD +I+P + + +L+++
Sbjct: 307 DYLDKCPDTPKNAAVDKNGCPEKVC-ITLKVEFDFDKANIKPEFRDEIKRVADFLKEYPD 365
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHD 139
+IEGH D G+ + L RRA AV GISA R+ YG+ P
Sbjct: 366 ATAVIEGHTDSKGTVKYNQKLSERRAKAVMKNLVDEFGISAKRLSAKGYGETKPVADNAT 425
Query: 140 EDAYAKNRRAI 150
E+ KNRR +
Sbjct: 426 EEGRQKNRRVV 436
>gi|322436615|ref|YP_004218827.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
gi|321164342|gb|ADW70047.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
Length = 531
Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 2/140 (1%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+ S + + + VL + ++ D++F DT Y+++ L+ + L
Sbjct: 379 AESAEQMRERLRAQLNEVLQTTETSRGVIVNLSDALF-DTGKYTLKTNTQVSLARVAGIL 437
Query: 77 EKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+ + +EG+ D +GS + L RA ++ V +G+ + YGK P
Sbjct: 438 QSYPGLKVQVEGYTDIVGSDALNQRLSENRANTTRDFMVKQGVPTDSISAAGYGKADPVA 497
Query: 136 YGHDEDAYAKNRRAIVFLKG 155
A+NRR + + G
Sbjct: 498 DNGTAAGRAQNRRVELVVSG 517
>gi|27462205|gb|AAO15380.1|AF330622_1 outer membrane protein [Helicobacter bizzozeronii]
Length = 172
Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 1/134 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFL 84
+ + + S + F +VGD VFF +S SI P VL WL
Sbjct: 38 SSMGDANFSSAVSGSTQDFMVNVGDRVFFSLNSSSIEPDAEHVLKRQAEWLLRYPHYFVT 97
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+EGHAD+ G+R ++ALG RR+ AV +Y V+ G+S+ RM+ SYGKE P D +
Sbjct: 98 VEGHADDRGTREYNLALGQRRSVAVRDYLVSLGVSSQRMRTISYGKERPVAVCDDNSCWN 157
Query: 145 KNRRAIVFLKGCRA 158
+NRR ++ + +
Sbjct: 158 QNRRVVLTINSVKG 171
>gi|322418107|ref|YP_004197330.1| peptidoglycan-associated lipoprotein [Geobacter sp. M18]
gi|320124494|gb|ADW12054.1| peptidoglycan-associated lipoprotein [Geobacter sp. M18]
Length = 196
Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/137 (31%), Positives = 68/137 (49%), Gaps = 2/137 (1%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-L 76
++ + + + D + S + V+F+ S + LS +
Sbjct: 59 VTEQTPVREPVVAQDLRETTKAPATDLQSQL-QKVYFNFDSSDLSEESRNTLSRNAEYLS 117
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
++ LIEG+ DE GS + ++ALG RRA A +Y V GI++ R+ SYG+E P+
Sbjct: 118 KQGSLKVLIEGNCDERGSDDYNMALGERRAKAAKDYLVNLGIASERISTISYGEEKPADP 177
Query: 137 GHDEDAYAKNRRAIVFL 153
GHDE A+AKNRRA +
Sbjct: 178 GHDEAAWAKNRRAEFVV 194
>gi|124006466|ref|ZP_01691299.1| outer membrane protein [Microscilla marina ATCC 23134]
gi|123987879|gb|EAY27559.1| outer membrane protein [Microscilla marina ATCC 23134]
Length = 693
Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
+++FFD + +++P+ L+ L + + I GH D GS + ++ L RA +
Sbjct: 586 NNLFFDYNQDTLKPSSYPELNRLIKILQKHPQMNIEISGHTDAHGSADKNLTLSQARANS 645
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V Y +GI+ R++ YG+ P A NRR +
Sbjct: 646 VLRYLTTQGIAKQRLRAKGYGQGRPVANNTTVAGRALNRRVEFLI 690
>gi|148555237|ref|YP_001262819.1| OmpA/MotB domain-containing protein [Sphingomonas wittichii RW1]
gi|148500427|gb|ABQ68681.1| OmpA/MotB domain protein [Sphingomonas wittichii RW1]
Length = 222
Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 53/133 (39%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ + T + ++ ++ + F T+SY ++P L + S L ++
Sbjct: 82 QEAKLREQTAGTGVEVERQGDELLLNMPAGITFATNSYEVQPQFRTTLDKVASTLSEYGK 141
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ GH D GS + L RA AV NY G++A+R+ +G P
Sbjct: 142 TYVDVYGHTDSTGSDAINEPLSRNRAEAVANYLSGHGVAAARIGTQGFGSRQPVASNATP 201
Query: 141 DAYAKNRRAIVFL 153
D NRR + +
Sbjct: 202 DGRQANRRVEIKI 214
>gi|71909465|ref|YP_287052.1| surface antigen protein [Dechloromonas aromatica RCB]
gi|71849086|gb|AAZ48582.1| OmpA/MotB:Rickettsia 17 kDa surface antigen [Dechloromonas
aromatica RCB]
Length = 221
Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 53/135 (39%), Gaps = 1/135 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
+ + + + Q + + FD+ Y I PA VL S ++
Sbjct: 82 EQKAAMEQATQGTGIGVTQTADNQLKLDIPSDLSFDSGHYDINPALHAVLDRFASTLIQN 141
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
I GH D +G + L + RA A +Y +RG++++R+ + G P
Sbjct: 142 PVTHVRIVGHTDNVGGDAINNPLSVNRAAATRDYLASRGVASNRISIDGRGSHEPIADNS 201
Query: 139 DEDAYAKNRRAIVFL 153
AKNRR +F+
Sbjct: 202 TPAGRAKNRRVEIFV 216
>gi|330899174|gb|EGH30593.1| OmpA/MotB [Pseudomonas syringae pv. japonica str. M301072PT]
Length = 271
Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 57/144 (39%), Gaps = 2/144 (1%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
++ + L + ++GD V FD ++ + + + + +
Sbjct: 123 AKLASAQQQGRWLEDQILSLATTETDRGLVMTLGD-VLFDAGHAELKNSASRTILKVVQF 181
Query: 76 LEKHDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
L+ + + IEG+ D G R ++ L RA AV + + G+ R+ V YG+E P
Sbjct: 182 LQINPRRVVRIEGYTDSTGDRQDNLKLSKDRAQAVADVLMDLGVDEKRIHVEGYGQEFPV 241
Query: 135 VYGHDEDAYAKNRRAIVFLKGCRA 158
E A+NRR + +
Sbjct: 242 NANTSERGRAQNRRVEIVFSDEKG 265
>gi|224824498|ref|ZP_03697605.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002]
gi|224602991|gb|EEG09167.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002]
Length = 218
Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHA 89
+T + + +Q ++ D++ F +S ++P+ L+++ + + D + GH
Sbjct: 90 ANTQVGVDRVGDQIKLTMPDNITFAVNSAELQPSVRTALTDVSNVLTQYPDTTITVAGHT 149
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G+ + L RRA +V + +RG++ SR+ YG+ P + AKNRR
Sbjct: 150 DNTGNVAYNQTLSQRRAQSVAGFLQSRGVAGSRINPVGYGQNQPIASNTTAEGRAKNRRV 209
Query: 150 IVFL 153
+ +
Sbjct: 210 EILI 213
>gi|330980720|gb|EGH78823.1| OmpA/MotB [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 271
Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 57/144 (39%), Gaps = 2/144 (1%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
++ + L + ++GD V FD ++ + + + + +
Sbjct: 123 AKLASAQQQGRWLEDQILSLATTETDRGLVMTLGD-VLFDAGHAELKNSASRTILKVVQF 181
Query: 76 LEKHDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
L+ + + IEG+ D G R ++ L RA AV + + G+ R+ V YG+E P
Sbjct: 182 LQINPRRVVRIEGYTDSTGDRQDNLKLSKDRAQAVADVLMDLGVDEKRIHVEGYGQEFPV 241
Query: 135 VYGHDEDAYAKNRRAIVFLKGCRA 158
E A+NRR + +
Sbjct: 242 NANTSERGRAQNRRVEIVFSDEKG 265
>gi|254500992|ref|ZP_05113143.1| peptidoglycan-associated lipoprotein, putative [Labrenzia
alexandrii DFL-11]
gi|222437063|gb|EEE43742.1| peptidoglycan-associated lipoprotein, putative [Labrenzia
alexandrii DFL-11]
Length = 158
Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 47/146 (32%), Positives = 72/146 (49%), Gaps = 4/146 (2%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
I ++ + + + + + F +VGD VFF+ ++
Sbjct: 11 IAVCFAVLFAAACAQTKPDGLATNV---KPGTGQDFVVNVGDRVFFEEDQSTLNSQGQAT 67
Query: 69 LSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
L+N W +EGHADE G+R +IALG RRA A +Y V++G+SASR+K S
Sbjct: 68 LANQAKWLSRYSKYTITVEGHADERGTRQYNIALGARRAQAARDYLVSQGVSASRIKTIS 127
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFL 153
YGKE P +D +++NRRA+ L
Sbjct: 128 YGKERPVAVCNDNSCWSQNRRAVTVL 153
>gi|330892247|gb|EGH24908.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv. mori
str. 301020]
Length = 150
Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 39/127 (30%), Positives = 71/127 (55%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL 84
+T + SL E+ + + +F+ S ++P ++ L L+ + +
Sbjct: 22 PNAGYGANTGAVDGSLSEEAALRAITTFYFEYDSSDLKPEAMRSLDVHAKDLKANGARVV 81
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+EG+ DE G+R ++ALG RRA AV Y V +G+S +++++ SYG+E P G+DE ++A
Sbjct: 82 LEGNTDERGTREYNMALGERRAKAVQRYLVLQGVSPAQLELVSYGEERPVATGNDEQSWA 141
Query: 145 KNRRAIV 151
+NRR +
Sbjct: 142 QNRRVEL 148
>gi|302187430|ref|ZP_07264103.1| OmpA/MotB [Pseudomonas syringae pv. syringae 642]
Length = 271
Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 57/144 (39%), Gaps = 2/144 (1%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
++ + L + ++GD V FD ++ + + + + +
Sbjct: 123 AKLASAQQQGRWLEDQILSLATTETDRGLVMTLGD-VLFDAGHAELKNSASRTILKVVQF 181
Query: 76 LEKHDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
L+ + + IEG+ D G R ++ L RA AV + + G+ R+ V YG+E P
Sbjct: 182 LQINPRRVVRIEGYTDSTGDRQENLKLSKDRAQAVADVLMDLGVDEKRIHVEGYGQEFPV 241
Query: 135 VYGHDEDAYAKNRRAIVFLKGCRA 158
E A+NRR + +
Sbjct: 242 NANTSERGRAQNRRVEIVFSDEKG 265
>gi|294782148|ref|ZP_06747474.1| outer membrane porin F [Fusobacterium sp. 1_1_41FAA]
gi|294480789|gb|EFG28564.1| outer membrane porin F [Fusobacterium sp. 1_1_41FAA]
Length = 396
Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 5/134 (3%)
Query: 24 LDTKISSPDTVLNESSLQEQ-FSSSVGDSVFFDTSSYSIR--PADIQVLSNLGSWLEKHD 80
K++ + V S++ ++ V FD Y +R P +VL NL L++ D
Sbjct: 261 KPGKLAKLEMVPPVPSIEANSLLINLDSEVLFDVDKYDVRVHPEAEEVLKNLAIVLKEMD 320
Query: 81 CD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
F I+GH D GS + L +RA +V N+ V++G++A + YG+ P
Sbjct: 321 VKNFEIDGHTDSDGSDEYNQVLSEKRANSVKNFLVSQGVTAE-ITTKGYGESKPVASNDT 379
Query: 140 EDAYAKNRRAIVFL 153
+ KNRR + +
Sbjct: 380 AEGKQKNRRVEIII 393
>gi|253702173|ref|YP_003023362.1| peptidoglycan-associated lipoprotein [Geobacter sp. M21]
gi|251777023|gb|ACT19604.1| peptidoglycan-associated lipoprotein [Geobacter sp. M21]
Length = 200
Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 1/144 (0%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS 70
S I+ + + +T + Q + V+F+ + + LS
Sbjct: 55 SGAAQQPITETTPSREQAVTQETAKEAGTGATQEVQAELQKVYFNFDAADLSEEARGSLS 114
Query: 71 NLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
+ + IEG+ DE GS + ++ALG RRA A +Y V GI++ R+ SYG
Sbjct: 115 KNAEYLSRQAGIKVRIEGNCDERGSDDYNMALGERRAKAARDYLVNLGIASDRLSTISYG 174
Query: 130 KEMPSVYGHDEDAYAKNRRAIVFL 153
+E P+ GHDE A+AKNRRA +
Sbjct: 175 EEKPADPGHDEAAWAKNRRAEFVI 198
>gi|254248380|ref|ZP_04941700.1| Outer membrane protein [Burkholderia cenocepacia PC184]
gi|124874881|gb|EAY64871.1| Outer membrane protein [Burkholderia cenocepacia PC184]
Length = 187
Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 9/163 (5%)
Query: 1 MQYSTIFIILSAITMMSIS--GIDNLDTKISSPDT------VLNESSLQEQFSSSVGDSV 52
M +L+ +++ + ++P+ + L S S+
Sbjct: 25 MSKMNRIAVLATFVLLAGCHHAAKTPENAAAAPEPSSETVATVTADDLNNPNSPLAKRSI 84
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFN 111
+FD YS++P +L +L H LI+G+ DE G+ ++ALG RR+ AV +
Sbjct: 85 YFDFDQYSVKPEFQSLLQAHADYLRSHPARRVLIQGNTDERGTSEYNLALGQRRSQAVAS 144
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G+ A++++ S GKE P GHDE+A+ +NRRA + +
Sbjct: 145 TLETLGVPATQLEAVSLGKEKPVALGHDEEAWTQNRRADLVYR 187
>gi|85706710|ref|ZP_01037802.1| peptidoglycan-associated lipoprotein [Roseovarius sp. 217]
gi|85668768|gb|EAQ23637.1| peptidoglycan-associated lipoprotein [Roseovarius sp. 217]
Length = 170
Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 49/164 (29%), Positives = 78/164 (47%), Gaps = 11/164 (6%)
Query: 1 MQYSTIFIILSAITMMSIS----------GIDNLDTKISSPDTVLNESSLQEQFSSSVGD 50
M Y + +IL A ++ +D + + + + F +VGD
Sbjct: 1 MTYLSKTLILCAGLALAACTNPDRFDNGNSVDLNNGAGAGLAGSAQDPTSAAYFQQAVGD 60
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
V F+ ++ L +W + D +IEGHADE G+R ++ALG RRA AV
Sbjct: 61 RVLFEVDQPTLNATAQSTLDGQANWLMTNRDFTAVIEGHADEQGTREYNLALGARRANAV 120
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
Y + +G++ +R++V S+GKE P +E Y KNRRA+ L
Sbjct: 121 QEYLITQGVAPNRLRVVSFGKERPIEICSNEACYTKNRRAVTVL 164
>gi|319940886|ref|ZP_08015225.1| OmpA domain-containing protein [Sutterella wadsworthensis 3_1_45B]
gi|319805768|gb|EFW02549.1| OmpA domain-containing protein [Sutterella wadsworthensis 3_1_45B]
Length = 176
Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 3/145 (2%)
Query: 11 SAITMMSISGIDNLDT--KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
S + +S+ + T S + + + SV+F SY + P V
Sbjct: 19 SGCSSVSLDEGNKAGTLAGEQSAAQTTAVNPFLDPANPLYHRSVYFAFDSYEVSPEYAAV 78
Query: 69 LSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
+ W + +I+G+ DE G R ++ALG +R+ AV GI +SR++ S
Sbjct: 79 VEAHAKWLAANPEVKIVIQGNTDERGGREYNLALGQKRSEAVLQRLQLLGIPSSRIEAVS 138
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVF 152
+GKE P GH E+A+A+NRRA +
Sbjct: 139 FGKEKPIALGHSEEAWAQNRRADIV 163
>gi|262068028|ref|ZP_06027640.1| outer membrane porin F [Fusobacterium periodonticum ATCC 33693]
gi|291378250|gb|EFE85768.1| outer membrane porin F [Fusobacterium periodonticum ATCC 33693]
Length = 403
Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 2/111 (1%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALG 102
++ + FD Y +RP L NL L++ D F I+GH D S + L
Sbjct: 291 LLITLDSGILFDVDKYDVRPEAEVALKNLAVVLKEADVKAFQIDGHTDSDASDEHNQVLS 350
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA AV ++ A+G++A + + YG+ P + KNRR + +
Sbjct: 351 ENRANAVKSFLAAQGLTAE-ISINGYGESRPIASNDTAEGKQKNRRVEIII 400
>gi|126733592|ref|ZP_01749339.1| peptidoglycan-associated lipoprotein, putative [Roseobacter sp.
CCS2]
gi|126716458|gb|EBA13322.1| peptidoglycan-associated lipoprotein, putative [Roseobacter sp.
CCS2]
Length = 173
Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 50/164 (30%), Positives = 80/164 (48%), Gaps = 12/164 (7%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKI-----------SSPDTVLNESSLQEQFSSSVGDS 51
+ I+ + + + D + ++ + F+ ++GD
Sbjct: 4 FKKAAIVALVLATAACTNPDRFGGGAGAGGADGAGLNTGAAGSASDPASPLFFNQTIGDR 63
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
V F + +I P +L WL + D +IEGHADE G+R ++ALG RRA AV
Sbjct: 64 VLFAVDTSTITPEGQTILDGQAQWLLTNADYRAVIEGHADEQGTREYNLALGQRRANAVR 123
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
Y V+RG+ ++R++VTS+GKE P +E YA+NRRA+ L
Sbjct: 124 EYLVSRGVPSTRLQVTSFGKERPIAICSEESCYAQNRRAVTVLS 167
>gi|170723577|ref|YP_001751265.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619]
gi|169761580|gb|ACA74896.1| OmpA/MotB domain protein [Pseudomonas putida W619]
Length = 240
Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 1/134 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHD 80
+ + +T + +Q + ++ F T S +I P+ L+NL + + + +
Sbjct: 90 QEAELRAQMANTGVEVQRQGDQIKLIMPGNITFATDSANIAPSFYSPLNNLATSFKQFNQ 149
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ G D GSR ++ L RRA AV Y ++G+ ASR+ V G + P D
Sbjct: 150 NTIEVVGFTDSTGSRQHNMDLSQRRAQAVSAYLTSQGVDASRVSVRGMGPDQPIASNADA 209
Query: 141 DAYAKNRRAIVFLK 154
+ A+NRR V LK
Sbjct: 210 NGRAQNRRVEVNLK 223
>gi|238782712|ref|ZP_04626742.1| OmpA family protein [Yersinia bercovieri ATCC 43970]
gi|238716372|gb|EEQ08354.1| OmpA family protein [Yersinia bercovieri ATCC 43970]
Length = 168
Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/155 (21%), Positives = 61/155 (39%), Gaps = 5/155 (3%)
Query: 4 STIFIILSAITMMSISGIDNLDTKISSPDTVLNESS----LQEQFSSSVGDSVFFDTSSY 59
S I++ AI ++ ++G +S+ + + + + V FD+
Sbjct: 11 SRIWLSFFAICLLVLAGCQTKPAGLSAEQIAALQEQGFKLTDNGWEFGLANKVLFDSDVR 70
Query: 60 SIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI 118
+ P+ Q + N+G F ++GH D +G + + L +RA AV + GI
Sbjct: 71 KLNPSGEQTVQNIGKALTAVGITHFRVDGHTDAMGEDSYNQQLSYQRAAAVADTLTTIGI 130
Query: 119 SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ V GK P A+NRR + +
Sbjct: 131 PRKNIDVRGRGKLEPVADNRTAKGRAENRRVAMIV 165
>gi|326559589|gb|EGE10003.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis 7169]
gi|326562671|gb|EGE12973.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis
103P14B1]
gi|326564691|gb|EGE14909.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis
46P47B1]
gi|326565509|gb|EGE15680.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis
12P80B1]
gi|326567731|gb|EGE17837.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis BC1]
gi|326568633|gb|EGE18704.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis BC7]
gi|326574224|gb|EGE24172.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis
101P30B1]
gi|326575009|gb|EGE24938.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis O35E]
Length = 171
Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 40/157 (25%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 4 STIFIILSAITMMSISGIDNLDTKISS--------PDTVLNESSLQEQFSSSVGDSVFFD 55
++ ++ S S + + +++ + +S++ V+FD
Sbjct: 13 LSVLTFMTGCANKSTSQVMVAPNAPTGYTGVIYTGVAPLVDNDETVKALASTLPSLVYFD 72
Query: 56 TSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
S I+P +L + L+ GH DE GSR +++LG RRA AV NY +
Sbjct: 73 FDSDEIKPQAAAILDEQAQFLTTNQTARVLVAGHTDERGSREYNMSLGERRAVAVRNYLL 132
Query: 115 ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+GI+ + +++ S+G+E P +G +E+A+++NRRA +
Sbjct: 133 GKGINQASVEIISFGEERPIAFGTNEEAWSQNRRAEL 169
>gi|83944251|ref|ZP_00956706.1| OmpA family protein [Sulfitobacter sp. EE-36]
gi|83953292|ref|ZP_00962014.1| OmpA family protein [Sulfitobacter sp. NAS-14.1]
gi|83842260|gb|EAP81428.1| OmpA family protein [Sulfitobacter sp. NAS-14.1]
gi|83844795|gb|EAP82677.1| OmpA family protein [Sulfitobacter sp. EE-36]
Length = 222
Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHAD 90
D+ + ++ ++ ++ + F T S ++ L+ L + + + I GH D
Sbjct: 95 DSDVIITNTGDRLIVTLPQDILFATDSTQVQAGMQNDLAALARNVNVYSNSTLQIVGHTD 154
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + + L RA AV N V+ G+ SR++ G+ P + A+NRR
Sbjct: 155 SDGEASYNQQLSEGRARAVANVLVSNGVPGSRIQSVGRGESQPVASNLNAAGKAQNRRVE 214
Query: 151 VFL 153
+ +
Sbjct: 215 IVI 217
>gi|319792464|ref|YP_004154104.1| ompa/motb domain protein [Variovorax paradoxus EPS]
gi|315594927|gb|ADU35993.1| OmpA/MotB domain protein [Variovorax paradoxus EPS]
Length = 216
Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Query: 58 SYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
++P L++L + + + +I GH D +G+ + L +RRA AV + V++
Sbjct: 114 KSVLKPEGRAKLTDLVEKIRGVNLEVIIAVGHTDSIGTDAYNQRLSVRRAEAVKAFLVSK 173
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
GI +R+ G++ P ++ AKNRR + + G RAN
Sbjct: 174 GIERNRVYTEGKGEKQPVADNRTKEGRAKNRRVEIEVVGTRAN 216
>gi|262274025|ref|ZP_06051837.1| Flagellar motor rotation protein MotB [Grimontia hollisae CIP
101886]
gi|262221835|gb|EEY73148.1| Flagellar motor rotation protein MotB [Grimontia hollisae CIP
101886]
Length = 208
Score = 83.3 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 55/129 (42%), Gaps = 1/129 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHA 89
+ + + + ++ F T+ I P Q L + + ++D IEGH
Sbjct: 80 AGSGIEVVREGDNIRLVMPSNITFGTNQSGISPGFYQSLDAVARVMNEYDKTFLSIEGHT 139
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G ++ L +RA +V +Y + ++A R+ VT YG+ P A+NRR
Sbjct: 140 DSTGDAAYNMTLSEKRAESVKSYLLRSAVNAKRLYVTGYGETQPIASNDTSTGRAQNRRV 199
Query: 150 IVFLKGCRA 158
+ + +A
Sbjct: 200 EIQIVPNQA 208
>gi|261417296|ref|YP_003250979.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261373752|gb|ACX76497.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302325429|gb|ADL24630.1| OmpA family protein [Fibrobacter succinogenes subsp. succinogenes
S85]
Length = 659
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRNSSIALGLR 104
+ + F T+S + + L ++ ++ + + ++GH D GS + L
Sbjct: 548 DQLKKGINFKTASARLTKSSYGTLDDIAELMIKIPEANLEVQGHTDNKGSEKRNKKLSED 607
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
RA AV Y V +G++ R++ YG E P D A+NRR +
Sbjct: 608 RAAAVVKYLVKKGVAKDRLRAAGYGSEKPIADNTDAAGRAQNRRVELV 655
>gi|212712432|ref|ZP_03320560.1| hypothetical protein PROVALCAL_03526 [Providencia alcalifaciens DSM
30120]
gi|212684889|gb|EEB44417.1| hypothetical protein PROVALCAL_03526 [Providencia alcalifaciens DSM
30120]
Length = 165
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 53/163 (32%), Positives = 87/163 (53%), Gaps = 12/163 (7%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLD-----TKISSPDTVLNESSLQEQFSSSV--G 49
MQ + + I L + + + S N D + ++ +T L+ L Q +
Sbjct: 1 MQLNKVLKGLMIALPIMAVAACSSNKNNDQTGDDSSMNQTNTGLSAEELARQQMEQLQQN 60
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYA 108
++V+F Y++ P ++L ++L + ++EGHADE G+ +IALG RRA A
Sbjct: 61 NTVYFGFDKYNVSPEYAEMLDAHAAFLRSNPSVRVVVEGHADERGTPEYNIALGERRANA 120
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
V Y ++G+S ++ + SYGKE P+V GH E YAKNRRA++
Sbjct: 121 VKMYLQSKGVSGDQVSLVSYGKEKPAVLGHTEADYAKNRRAVI 163
>gi|188587883|ref|YP_001922642.1| chemotaxis MotB protein [Clostridium botulinum E3 str. Alaska E43]
gi|188498164|gb|ACD51300.1| putative chemotaxis MotB protein [Clostridium botulinum E3 str.
Alaska E43]
Length = 244
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 53/133 (39%), Gaps = 5/133 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ ++ + S D+VFF++ +I+ Q L ++ L D +EG+ D
Sbjct: 104 EGSVSTQIQERGLIISFNDNVFFNSGDATIKNEYKQKLISISKILNNIDNYIRVEGNTDN 163
Query: 92 ----LGSRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ +S+ L RA V V IS+ ++ YG+ P ED A N
Sbjct: 164 VAINTENFHSNWQLSAIRAANVVELLVKEGNISSDKLSAIGYGEYRPVKSNDTEDGRAAN 223
Query: 147 RRAIVFLKGCRAN 159
RR + + N
Sbjct: 224 RRVDIVILNNEYN 236
>gi|110636904|ref|YP_677111.1| OmpA family outer membrane protein [Cytophaga hutchinsonii ATCC
33406]
gi|110279585|gb|ABG57771.1| outer membrane protein, OmpA family [Cytophaga hutchinsonii ATCC
33406]
Length = 620
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 1/107 (0%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRA 106
+ ++FFD+ +IR L L L+ + I GH D +G + L RA
Sbjct: 513 ILRNIFFDSGKATIRLESTAELLKLVDLLKNNPTLRIEIAGHTDNIGDETLNQKLSEERA 572
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V + A GISA R+ YG P + +NRR + +
Sbjct: 573 KNVVTFLTANGISAGRLVAKGYGSSQPVAPNTTDTGRQQNRRTEIKI 619
>gi|311696306|gb|ADP99179.1| OmpA/MotB domain protein [marine bacterium HP15]
Length = 402
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 58/143 (40%), Gaps = 2/143 (1%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
++ D + D + + + V F T+S I A + + + ++
Sbjct: 260 VVNSKDQCPDTTAGADVDASGCEGVTETIQTFTIEVQFPTNSSVIGNAYDEEIRRVADFM 319
Query: 77 EKHDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPS 134
+++ + I GH+D G + + L RRA AV G+ +R++ YG+E P
Sbjct: 320 QENPETIVEIAGHSDSRGDADYNQFLSQRRAEAVAGRLTGPLGVDPARVEAVGYGEEQPI 379
Query: 135 VYGHDEDAYAKNRRAIVFLKGCR 157
+ D A NRR ++ R
Sbjct: 380 ASNNTADGRAANRRVEARIQVRR 402
>gi|237654130|ref|YP_002890444.1| OmpA/MotB domain protein [Thauera sp. MZ1T]
gi|237625377|gb|ACR02067.1| OmpA/MotB domain protein [Thauera sp. MZ1T]
Length = 222
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/129 (28%), Positives = 54/129 (41%), Gaps = 1/129 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FL 84
+ ++ + + Q + V FD ++I+P VL L S L +H
Sbjct: 88 EQATAGTGIGISQTTDNQLKVDIPADVSFDVGRHAIKPNMRPVLDRLASTLNQHPVTTVT 147
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
I GH D GS + L + RA A +Y V RG+SA R+ V G P A
Sbjct: 148 IIGHTDSTGSDAVNDPLSINRAAATRDYLVQRGVSAQRIAVDGRGSRQPVADNSTASGRA 207
Query: 145 KNRRAIVFL 153
NRR +F+
Sbjct: 208 MNRRVEIFI 216
>gi|310817527|ref|YP_003949885.1| OmpA domain-containing protein [Stigmatella aurantiaca DW4/3-1]
gi|309390599|gb|ADO68058.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 1779
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 44/127 (34%), Gaps = 3/127 (2%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS--WLEKHDCDFLIEGHAD 90
+ E + V+F T+ I +L + + +EGH D
Sbjct: 1650 DQGEVNVRVEGKKILILQKVYFATNKDIILDRSFSLLKQVAAVLRANPQLTKIRVEGHTD 1709
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
GS ++ L RRA +V Y + + A R++ YG+ P NRR
Sbjct: 1710 SQGSDAFNLDLSDRRAKSVRTYLIEKEGIAADRLEAVGYGETKPVDTNDTVAGRENNRRV 1769
Query: 150 IVFLKGC 156
+ G
Sbjct: 1770 EFIIVGA 1776
>gi|253582681|ref|ZP_04859902.1| outer membrane protein [Fusobacterium varium ATCC 27725]
gi|251835551|gb|EES64091.1| outer membrane protein [Fusobacterium varium ATCC 27725]
Length = 216
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/123 (26%), Positives = 62/123 (50%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+T + S + + ++ V F T S +I P+ L+++ + ++ + ++ G+ D
Sbjct: 90 NTEVQVSQKGDNLNLNLPGGVTFATDSSNIVPSFYGPLNSIATVLVQYPETRIIVNGYTD 149
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
+GS + +I L +RA +V NY + +G+SA R+ YG E P A+NRR
Sbjct: 150 NVGSASYNITLSEKRAASVRNYLIQQGVSARRISYVGYGMENPRATNSTAAGRAENRRVE 209
Query: 151 VFL 153
+ +
Sbjct: 210 LEI 212
>gi|162454068|ref|YP_001616435.1| hypothetical protein sce5792 [Sorangium cellulosum 'So ce 56']
gi|161164650|emb|CAN95955.1| hypothetical protein sce5792 [Sorangium cellulosum 'So ce 56']
Length = 985
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 42/113 (37%), Gaps = 2/113 (1%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS--WLEKHDCDFLIEGHADELGSRNSSIA 100
+ + F+T S I ++ + + I+GH D G R +
Sbjct: 870 GNEIKISRQIHFETDSAKILGDSNALMEEIADVLQRNPNIRKVEIQGHTDNTGGREHNQT 929
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA AV + + G+ SR+ YG++ P AKNRR +
Sbjct: 930 LSEARANAVRAWLIRAGVDGSRLLAKGYGQDRPVAPNVTPANKAKNRRVQFII 982
>gi|332559482|ref|ZP_08413804.1| OmpA family outer membrane protein [Rhodobacter sphaeroides WS8N]
gi|332277194|gb|EGJ22509.1| OmpA family outer membrane protein [Rhodobacter sphaeroides WS8N]
Length = 652
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 43/131 (32%), Gaps = 1/131 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGH 88
+ + G + F+ S I + L L + I GH
Sbjct: 475 EAALPTAQECMSRIRRVLAGQKITFEPGSAEIDQSARGTLDGLAEVFKVCKAMPLEISGH 534
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D GS + AL RA AV R + RMK YG+E P E+ NRR
Sbjct: 535 TDSQGSEGGNKALSQARAEAVLLALQGRRVDVGRMKAVGYGEERPIADNGKEEGREANRR 594
Query: 149 AIVFLKGCRAN 159
L G N
Sbjct: 595 IEFTLLGEDGN 605
>gi|77464589|ref|YP_354093.1| OmpA family outer membrane protein [Rhodobacter sphaeroides 2.4.1]
gi|77389007|gb|ABA80192.1| possible outer membrane protein, OmpA family [Rhodobacter
sphaeroides 2.4.1]
Length = 652
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 43/131 (32%), Gaps = 1/131 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGH 88
+ + G + F+ S I + L L + I GH
Sbjct: 475 EAALPTAQECMSRIRRVLAGQKITFEPGSAEIDQSARGTLDGLAEVFKVCKAMPLEISGH 534
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D GS + AL RA AV R + RMK YG+E P E+ NRR
Sbjct: 535 TDSQGSEGGNKALSQARAEAVLLALQGRRVDVGRMKAVGYGEERPIADNGKEEGREANRR 594
Query: 149 AIVFLKGCRAN 159
L G N
Sbjct: 595 IEFTLLGEDGN 605
>gi|84499777|ref|ZP_00998065.1| OmpA domain protein [Oceanicola batsensis HTCC2597]
gi|84392921|gb|EAQ05132.1| OmpA domain protein [Oceanicola batsensis HTCC2597]
Length = 641
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 43/130 (33%), Gaps = 1/130 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGH 88
E + + S + F+ S ++ +L ++ L+ D I GH
Sbjct: 475 EAALPTPEECIADVKSIQESRKINFEPGSATVTGDSRAILDDIAEVLKFCGPVDLEIGGH 534
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D G + L RA V R + + T YG+ P E+ +NRR
Sbjct: 535 TDSQGREIMNEQLSQDRADTVLAELRQRRVKTAGFVATGYGETQPIADNDTEEGREENRR 594
Query: 149 AIVFLKGCRA 158
L A
Sbjct: 595 IEFSLIAAAA 604
>gi|327480138|gb|AEA83448.1| outer membrane protein [Pseudomonas stutzeri DSM 4166]
Length = 200
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 48/131 (36%), Gaps = 2/131 (1%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI 85
+ P V V FD ++ + NL +++++ +
Sbjct: 67 VETVEPMPQTQPEPEPAAAPVRVELDVKFDFDRDVVKQDSYSDIQNLADFMKEYRQTTTV 126
Query: 86 -EGHADELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAY 143
EGH D +G+ + L RRA AV G+ +R+ YG+ P E+
Sbjct: 127 LEGHTDSVGTDAYNQRLSERRANAVRRVLVDELGVEGNRVNAVGYGESRPVADNSTEEGR 186
Query: 144 AKNRRAIVFLK 154
A NRR ++
Sbjct: 187 AINRRVEAEVE 197
>gi|312887507|ref|ZP_07747103.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
gi|311299995|gb|EFQ77068.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
Length = 630
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
+ ++FFDT+ Y I+ L+ + + + GH D +G + L RA
Sbjct: 522 ILKNIFFDTNKYDIKDESKTELAKLIAFLNDNPSVKIEVSGHTDNVGVDAINQTLSQNRA 581
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV+ Y + + IS +R+ YGK P +E+ NRR +
Sbjct: 582 KAVYQYLIGQHISPNRLVYKGYGKAQPIAPNTNEEGRKLNRRTEFKI 628
>gi|117621166|ref|YP_856420.1| OmpA family protein [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
gi|117562573|gb|ABK39521.1| OmpA family protein [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
Length = 162
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 28/162 (17%), Positives = 66/162 (40%), Gaps = 6/162 (3%)
Query: 1 MQYSTIFII-LSAITMMSISGIDNLDTKISSPDTVLNESS----LQEQFSSSVGDSVFFD 55
M+ + L + + ++G + +++ + + E ++ + V F
Sbjct: 1 MKIHVLMKTGLIGLLLSVLAGCQSAPHGLTAEQIAVLKEQGFRLTDEGWTLDFSNRVLFA 60
Query: 56 TSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
++ ++ P V+ LG L++ I+GH D G+ + + L +RA +V + V
Sbjct: 61 NNADALTPKTRVVVEKLGKTLQEVGLNRARIDGHTDSNGAADYNDQLSYKRAQSVADVLV 120
Query: 115 ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
+ G+ + + + G+ P A+NRR + +
Sbjct: 121 SVGMPQANLDIRGRGERDPIADNKTAAGRAENRRVAIVISNE 162
>gi|187250732|ref|YP_001875214.1| outer membrane protein [Elusimicrobium minutum Pei191]
gi|186970892|gb|ACC97877.1| Outer membrane protein [Elusimicrobium minutum Pei191]
Length = 174
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 12/165 (7%)
Query: 1 MQYSTIFIILS-AITMMSISGIDNLDTKISSPDTV----------LNESSLQEQFSSSVG 49
M++ + ++L+ I + S D D + L + + +E F+S
Sbjct: 1 MKFIKVILVLALFIGVAGCSSEPKRDENGYVADPIIEKERKRNARLEKQTSEEMFASRQI 60
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
SV F+ S + + +L + ++ + ++EGH D +GS + L RA A
Sbjct: 61 PSVNFEFDSVHLAASAYPILDKVAGFMVGRQHIKLIVEGHTDNVGSDEYNDWLSEARAIA 120
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V +Y V+RG+ +KV +GK P + A NRR + +
Sbjct: 121 VKSYIVSRGVHPDSIKVYGFGKRRPLTLDDSIEGRATNRRIVFTV 165
>gi|163737113|ref|ZP_02144531.1| OmpA/MotB [Phaeobacter gallaeciensis BS107]
gi|161389717|gb|EDQ14068.1| OmpA/MotB [Phaeobacter gallaeciensis BS107]
Length = 219
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 66/149 (44%), Gaps = 3/149 (2%)
Query: 8 IILSAITMMSISGIDNLDTKISSP--DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPAD 65
++ +A + + +D + ++ + ++ + ++ S+ + + F T S ++ PA
Sbjct: 66 LVGAAAGSVIGNQLDAQERELRQSISNDGISIVNTGDRLIVSLPNDLTFATDSAAVSPAV 125
Query: 66 IQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
L+ + S + + + GH D G + L RRA AV + A G+ +R++
Sbjct: 126 RSDLNKVASSLVRYPNSQVQVIGHTDSDGDAGYNQGLSERRANAVADQIQAGGVPYNRVQ 185
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ G+ P + A+NRR + +
Sbjct: 186 IIGRGESQPVASNLTAEGKARNRRVEIVV 214
>gi|15964027|ref|NP_384380.1| hypothetical protein SMc00354 [Sinorhizobium meliloti 1021]
gi|15073203|emb|CAC41711.1| Probable porin [Sinorhizobium meliloti 1021]
Length = 221
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHA 89
T ++ + ++ ++ ++ F T + PA L ++ L K + ++GH
Sbjct: 92 QGTGVSVTRAGDRIILNMPSNITFATDRDQVIPAFYSTLDSVAIVLRKFNKTLIDVDGHT 151
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GS + + L RRA +V NY +RG+ RM YG E P E A+NRR
Sbjct: 152 DSTGSASYNQGLSERRAASVANYLASRGVDQRRMSAVGYGLERPIASNATEVGRAQNRRV 211
Query: 150 IVFL 153
+ +
Sbjct: 212 EISI 215
>gi|153005701|ref|YP_001380026.1| OmpA/MotB domain-containing protein [Anaeromyxobacter sp. Fw109-5]
gi|152029274|gb|ABS27042.1| OmpA/MotB domain protein [Anaeromyxobacter sp. Fw109-5]
Length = 256
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 4/120 (3%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADELG--- 93
+ L+ + + + D + F + S ++ A L + L + + +EGH D +
Sbjct: 121 TELRGKMTVKMKDKILFSSGSATLGRAGKDALRAVAEVLTGVEGKVIRVEGHTDNVPLGR 180
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L + RA AV + G+ SR+ YG+ P + ++NRR + L
Sbjct: 181 GFATNWDLSVARALAVVRFLQESGVQPSRLAAAGYGEHQPIASNDTPEGRSQNRRIEIVL 240
>gi|229592593|ref|YP_002874712.1| putative lipoprotein [Pseudomonas fluorescens SBW25]
gi|229364459|emb|CAY52284.1| putative putative lipoprotein [Pseudomonas fluorescens SBW25]
Length = 163
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 27/155 (17%), Positives = 55/155 (35%), Gaps = 6/155 (3%)
Query: 6 IFIILSAITMMSISGIDNLDTKISSPDTVLNESS-----LQEQFSSSVGDSVFFDTSSYS 60
I ++++++ G K +P V E ++ + V F + +
Sbjct: 7 FMFITLLVSLLALGGCQTAPPKGLTPAQVAVLKQQGFELTDEGWAFGLSGKVLFGSDVEA 66
Query: 61 IRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
+ ++ +G L I+GH D G + L LRRA +V ++ G+
Sbjct: 67 LNQPSTDIVQRIGKALLGVGIERVRIDGHTDASGKETYNQQLSLRRAKSVATVLMSVGMK 126
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+++ G P +NRR + +
Sbjct: 127 EENIQLRGLGSSEPVASNDTAAGRTENRRVSIVVM 161
>gi|83592431|ref|YP_426183.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170]
gi|83575345|gb|ABC21896.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170]
Length = 161
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 7/155 (4%)
Query: 1 MQYSTIFIILSAITMMSISGID------NLDTKISSPDTVLNESSLQEQFSSSVGDSVFF 54
M ++A +++ +S T + +F VGD VFF
Sbjct: 1 MMKFGFLGAVAATMLLAACSSTPDTGAGGAGAGGASSSTSGPTAGSVAEFQQVVGDRVFF 60
Query: 55 DTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYF 113
Y++ P L W + + +EGHADE G+R ++ALG RRA +V +
Sbjct: 61 GYDQYNLAPDARATLQRQAQWLNQYGNFSLTVEGHADERGTREYNLALGERRANSVREFL 120
Query: 114 VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
+++G+SA+R++V SYGKE P E YA+NRR
Sbjct: 121 ISQGVSANRLRVVSYGKERPVCTETAESCYARNRR 155
>gi|32033646|ref|ZP_00133957.1| COG2885: Outer membrane protein and related
peptidoglycan-associated (lipo)proteins [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126207788|ref|YP_001053013.1| outer membrane protein precursor PalA [Actinobacillus
pleuropneumoniae L20]
gi|307249520|ref|ZP_07531507.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|126096580|gb|ABN73408.1| outer membrane protein precursor PalA [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|306858375|gb|EFM90444.1| Outer membrane protein PalA [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
Length = 156
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 47/156 (30%), Positives = 77/156 (49%), Gaps = 7/156 (4%)
Query: 1 MQY--STIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG---DSVFFD 55
M+ + I A + + S + ++ + N + + ++V+F
Sbjct: 1 MKKLAKVLMIAAPAFVLAACSSSSDNANANANANANANAGQFGGMTAEDLQTRYNTVYFG 60
Query: 56 TSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA 115
SY++ Q+L ++L + + GHADE G+ +IALG RRA AV NY
Sbjct: 61 FDSYAVEGEYQQLLDAHAAYLTSANGKVTVAGHADERGTPEYNIALGQRRADAVKNYLAT 120
Query: 116 RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+G A+++ SYG+E P+V GH E YAKNRRA++
Sbjct: 121 KG--ANQVSTVSYGEEKPAVLGHTEADYAKNRRAVL 154
>gi|5081413|gb|AAD39368.1|AF117973_1 outer membrane protein OprF [Pseudomonas stutzeri DSM 4166]
Length = 323
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 48/118 (40%), Gaps = 2/118 (1%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELG 93
++ V V FD +R + NL +++++ ++EGH D +G
Sbjct: 205 VDTEPEPAPEVVRVELDVKFDFDKSRVREESYSDIKNLADFMQQYPQTTTVVEGHTDSVG 264
Query: 94 SRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
+ + L RRA AV N V G+ +R+ YG+ P E+ NRR
Sbjct: 265 TDQYNQRLSERRAEAVRNVLVNEYGVQGNRVNSVGYGESRPVADNSTEEGRQINRRVE 322
>gi|163745826|ref|ZP_02153185.1| peptidoglycan-associated lipoprotein, putative [Oceanibulbus
indolifex HEL-45]
gi|161380571|gb|EDQ04981.1| peptidoglycan-associated lipoprotein, putative [Oceanibulbus
indolifex HEL-45]
Length = 178
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 59/173 (34%), Positives = 83/173 (47%), Gaps = 18/173 (10%)
Query: 1 MQ-YSTIFIILSAITMMSISGIDN----------------LDTKISSPDTVLNESSLQEQ 43
M+ T +++SA+ + + + D N+ +
Sbjct: 1 MKRILTSTLLISALAVSACTNPDRFGADGMGGAGVGANGGAGVNAGVVPGSANDPTSTAY 60
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALG 102
F +VGD V F ++ L +WL+ + D +IEGHADE G+R +IALG
Sbjct: 61 FQQAVGDRVLFLVDQSTLTDVGRATLDGQVAWLQTNSDYQAVIEGHADEQGTREYNIALG 120
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
RRA AV Y ++RGI+ASR+K SYGKE P DE YAKNRRA+ L G
Sbjct: 121 GRRANAVREYMISRGIAASRLKTISYGKERPIEICSDEACYAKNRRAVTVLAG 173
>gi|255099860|ref|ZP_05328837.1| putative chemotaxis protein [Clostridium difficile QCD-63q42]
Length = 246
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 50/136 (36%), Gaps = 5/136 (3%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGH 88
+ ++ S+ D++ FDT ++ + +G L + + +EGH
Sbjct: 102 NGMANSVSLRVQDRGLVISLKDTILFDTGKAIVKDNSRDKIIQIGKMLNEMNSYMRVEGH 161
Query: 89 ADELGS----RNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVYGHDEDAY 143
D + S+ L + RA V + ++ YG+ P E+
Sbjct: 162 TDNMSIKNSEFKSNWDLSVMRATNVVQLLIDNAGIAPDKLSAVGYGEFRPIAENSSEEGR 221
Query: 144 AKNRRAIVFLKGCRAN 159
+KNRR + L + +
Sbjct: 222 SKNRRVDIVLVDSKYD 237
>gi|238797533|ref|ZP_04641031.1| OmpA family protein [Yersinia mollaretii ATCC 43969]
gi|238718674|gb|EEQ10492.1| OmpA family protein [Yersinia mollaretii ATCC 43969]
Length = 168
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/155 (20%), Positives = 60/155 (38%), Gaps = 5/155 (3%)
Query: 4 STIFIILSAITMMSISGIDNLDTKISSPDTVLNESS----LQEQFSSSVGDSVFFDTSSY 59
S I++ AI+++ + G +S+ + + + + V FD+
Sbjct: 11 SRIWLSFFAISLLVLVGCQAKPQGLSAEQIAALQEQGFKLTDNGWEFGLANKVLFDSDVK 70
Query: 60 SIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI 118
+ P ++ + N+G ++GH D G + + L +RA AV + GI
Sbjct: 71 KLNPDGVRTVQNIGKALTAVGITHLRVDGHTDSTGEDSYNQQLSYQRAAAVADTLALIGI 130
Query: 119 SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ + V GK P A+NRR + +
Sbjct: 131 PRANIDVRGRGKLDPVADNRTAKGRAENRRVSMIV 165
>gi|254516702|ref|ZP_05128761.1| OmpA/MotB [gamma proteobacterium NOR5-3]
gi|219675125|gb|EED31492.1| OmpA/MotB [gamma proteobacterium NOR5-3]
Length = 177
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 83/169 (49%), Gaps = 20/169 (11%)
Query: 4 STIFIILSAITMMSISGIDNLDTKISSPDTVLNESSL--------------------QEQ 43
+ ++ +AI +++ SG + + ++ ++ EQ
Sbjct: 9 KALTLLFAAIFLVACSGTSTKEDEAAAAAAAAEAAAADAAREAERQAQSAAAEAQRQMEQ 68
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGL 103
+ + G +F+ S ++ PA + + L+ +D ++GH DE G+R+ ++ALG
Sbjct: 69 AAMAAGTVFYFEFDSSTLTPAAQAAVDAHIALLKTNDRSVRLDGHTDERGTRDYNMALGE 128
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
RRA AV +Y V G+++ R++ SYG+E P YG E ++++NRR +
Sbjct: 129 RRANAVRDYMVVNGVASYRIETVSYGEEQPVAYGSGESSWSQNRRVELK 177
>gi|146343548|ref|YP_001208596.1| putative outer membrane protein (ompA-like) [Bradyrhizobium sp.
ORS278]
gi|146196354|emb|CAL80381.1| conserved hypothetical protein; putative outer membrane protein
(ompA-like) [Bradyrhizobium sp. ORS278]
Length = 464
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 48/138 (34%), Gaps = 3/138 (2%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSV--GDSVFFDTSSYSIRPADIQVLSNLGSW-L 76
G P + ++ +Q S + + F+T + +L L
Sbjct: 327 GWQVKAEITVKPAAAPVDPTVCQQLFSDLLGKAKIRFETGRSDLDRDSTGLLDRLVEIAF 386
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ I GH D G ++ L +RA AV +Y V G+ A R YG P
Sbjct: 387 RCPTANVDIIGHTDAEGDSAANQVLSQKRAQAVADYLVKAGLPADRFTPIGYGSTQPIAS 446
Query: 137 GHDEDAYAKNRRAIVFLK 154
+ +NRR ++
Sbjct: 447 NDTAEGRTQNRRIEFVVR 464
>gi|121998997|ref|YP_001003784.1| OmpA/MotB domain-containing protein [Halorhodospira halophila SL1]
gi|121590402|gb|ABM62982.1| OmpA/MotB domain protein [Halorhodospira halophila SL1]
Length = 208
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 51/131 (38%), Positives = 69/131 (52%), Gaps = 1/131 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD- 80
+ + PD L+ + L E S V F S +IR DI VL +L +H
Sbjct: 74 ERARAEGLDPDDPLDAAVLDEPESPLATRRVHFAFDSSNIRDDDIPVLEAHAEFLREHPD 133
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
IEGH DE GSR ++ALG RRA AV A G + +++V SYG+E P V +E
Sbjct: 134 ERMTIEGHTDERGSREYNLALGERRAEAVERLLRANGARSDQLEVVSYGEEDPLVDESNE 193
Query: 141 DAYAKNRRAIV 151
DA+A+NRRA +
Sbjct: 194 DAWAENRRAEL 204
>gi|269121368|ref|YP_003309545.1| OmpA/MotB domain protein [Sebaldella termitidis ATCC 33386]
gi|268615246|gb|ACZ09614.1| OmpA/MotB domain protein [Sebaldella termitidis ATCC 33386]
Length = 215
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHA 89
V + + + ++V F T+S +I L ++ S L+++ + + GH
Sbjct: 89 GTGVEVTRTAEGEIKLVAPENVTFATNSSTISSRFTNTLDSIASVLKEYPDSNITVSGHT 148
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G+ + L + RA +V NY GI++SR+ YG + P D A+NRR
Sbjct: 149 DSTGNDAINNPLSVNRANSVANYLKQEGIASSRITAVGYGSKQPVASNSTSDGRAQNRRV 208
Query: 150 IVFL 153
+ +
Sbjct: 209 EIKI 212
>gi|197364467|ref|YP_002144104.1| outer membrane lipoprotein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197095944|emb|CAR61525.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
Length = 205
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD+SS +++PA L+ + L+++ + G+ D
Sbjct: 79 GTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVVGYTD 138
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + ++ L +RA +V + + +G+ ASR++ + G P + A+NRR
Sbjct: 139 STGSHDLNMRLSQQRADSVASSLITQGVDASRIRTSGMGPANPIASNSTAEGKAQNRRVE 198
Query: 151 VFLK 154
+ L
Sbjct: 199 ITLS 202
>gi|312892404|ref|ZP_07751899.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
gi|311295188|gb|EFQ72362.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
Length = 452
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 51/142 (35%), Gaps = 7/142 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS 70
A T++ SG + V + ++ F+ S +R + +L
Sbjct: 317 PAGTVVDGSGCPIKFPTPDTTAKVAPVVATP-------YSNIQFEFDSSVLRTSSYPILD 369
Query: 71 NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
+ L + G+A G+ ++ L RA +V Y V G+ A R+KV G+
Sbjct: 370 ATSADLRTGKKSITVNGYASSEGTAAHNLQLSKDRANSVKTYLVNSGVDAKRIKVKGLGE 429
Query: 131 EMPSVYGHDEDAYAKNRRAIVF 152
P ED NRR
Sbjct: 430 THPIADNSTEDGRVLNRRVEFK 451
>gi|256820114|ref|YP_003141393.1| OmpA/MotB domain-containing protein [Capnocytophaga ochracea DSM
7271]
gi|256581697|gb|ACU92832.1| OmpA/MotB domain protein [Capnocytophaga ochracea DSM 7271]
Length = 456
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 54/127 (42%), Gaps = 1/127 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFL 84
+S + + ++ + ++ FD + +IRP VL+ + + + F
Sbjct: 326 PGPASNNGCPEVTEEVQKKLNDFARTILFDVNKATIRPQSATVLNQIVDVLNQYKNAKFS 385
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
IEG+ D G R+ + L RAY+V Y + +GI R+ +G + P +
Sbjct: 386 IEGYTDISGKRDKNQKLSENRAYSVKAYLIEKGIDEGRLTAKGFGPDKPIASNKTKKGRE 445
Query: 145 KNRRAIV 151
NRR +
Sbjct: 446 LNRRVEI 452
>gi|254473105|ref|ZP_05086503.1| OmpA/MotB [Pseudovibrio sp. JE062]
gi|211957826|gb|EEA93028.1| OmpA/MotB [Pseudovibrio sp. JE062]
Length = 160
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 52/127 (40%), Positives = 70/127 (55%), Gaps = 1/127 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGH 88
+ + + F +VGD VFF + S+ A VL WL+ + + IEGH
Sbjct: 33 TSGNSSVAAGSGQDFVVNVGDRVFFLNNQSSLDGAARGVLDKQAQWLQHYKNYSITIEGH 92
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
ADE G+R +IALG RRA AV Y VA+GIS SR+K SYGKE P + +++NRR
Sbjct: 93 ADERGTRQYNIALGARRAAAVREYLVAKGISPSRIKTISYGKERPVAVCNAASCWSQNRR 152
Query: 149 AIVFLKG 155
A+ L G
Sbjct: 153 AVTVLNG 159
>gi|126463429|ref|YP_001044543.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
17029]
gi|126105093|gb|ABN77771.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17029]
Length = 652
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 43/131 (32%), Gaps = 1/131 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGH 88
+ + G + F+ S I + L L + I GH
Sbjct: 475 EAALPTAQECMSRIRRVLAGQKITFEPGSAEIDQSARGTLDGLAEVFKVCKAMPLEISGH 534
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D GS + AL RA AV R + RMK YG+E P E+ NRR
Sbjct: 535 TDSQGSEGGNKALSQARAEAVLLALQGRRVDVGRMKAVGYGEERPIADNGKEEGREANRR 594
Query: 149 AIVFLKGCRAN 159
L G N
Sbjct: 595 IEFTLLGEDGN 605
>gi|310814625|ref|YP_003962589.1| OmpA family protein [Ketogulonicigenium vulgare Y25]
gi|308753360|gb|ADO41289.1| OmpA family protein [Ketogulonicigenium vulgare Y25]
Length = 227
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 46/113 (40%), Gaps = 1/113 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIA 100
+ + ++ V F T+S ++ L + + + + GH D GS + +
Sbjct: 111 QNLTVTMPQDVLFGTNSTAVSIQSQTDLRTVAASLNRYPNTSISVIGHTDSTGSASYNQD 170
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L +RRA AV + + G++ +R+ G P D NRR + +
Sbjct: 171 LSVRRAQAVASVLINGGVAPARVYTVGRGASQPIASNATPDGRQLNRRVEIII 223
>gi|295095609|emb|CBK84699.1| type IV / VI secretion system protein, DotU family [Enterobacter
cloacae subsp. cloacae NCTC 9394]
Length = 412
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 47/138 (34%), Gaps = 4/138 (2%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
K ++ ++ + F ++S +R V+ + + L+
Sbjct: 264 KPEIDAGLVAVKDEADRSVVILKGDGLFASASTVVRDRYEPVIDRIAQAMNNVSGKILVV 323
Query: 87 GHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
G++D + S+ L L RA +V R+K G+ P +
Sbjct: 324 GYSDNVPIRSARFASNYELSLERARSVQKQLQGSLSQPERVKAEGRGEINPVAPNTTPEN 383
Query: 143 YAKNRRAIVFLKGCRANT 160
A+NRR + L NT
Sbjct: 384 RARNRRVEITLLVSPDNT 401
>gi|283835926|ref|ZP_06355667.1| OmpA family protein [Citrobacter youngae ATCC 29220]
gi|291068103|gb|EFE06212.1| OmpA family protein [Citrobacter youngae ATCC 29220]
Length = 220
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 64/125 (51%), Gaps = 1/125 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHA 89
T ++ + + ++ ++V FD++S +++PA L+ + L+++D + G
Sbjct: 93 QGTGVSVTRSGDNIILNMPNNVTFDSNSSNLKPAGANTLTGVAMVLKEYDKTAVNVLGFT 152
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GS++ ++ L +RA +V + + +G++A+R++ G P + A+NRR
Sbjct: 153 DSTGSQDLNMRLSQQRADSVASALITQGVAANRIRTQGMGPANPIASNSTAEGKAQNRRV 212
Query: 150 IVFLK 154
+ L
Sbjct: 213 EITLS 217
>gi|315453876|ref|YP_004074146.1| peptidoglycan-associated lipoprotein [Helicobacter felis ATCC
49179]
gi|315132928|emb|CBY83556.1| peptidoglycan-associated lipoprotein [Helicobacter felis ATCC
49179]
Length = 227
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/135 (24%), Positives = 62/135 (45%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+ + T + P +S ++ S + V+FD Y++RP + ++
Sbjct: 91 AQKNANATSETVPAPQEPQSEQEQFKSGEIVGQVYFDFDKYNVRPDMQDAVDQGAQKIQD 150
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
L+EG+ DE G+ + ALG +RA +V V +GI+ ++ S+G+ P
Sbjct: 151 SKMKVLLEGNTDEFGTGEYNFALGNKRALSVKEALVVKGIAQDNIRTISFGESKPICLEK 210
Query: 139 DEDAYAKNRRAIVFL 153
++ Y KNRR + +
Sbjct: 211 TKECYQKNRRVDIKV 225
>gi|167584247|ref|ZP_02376635.1| outer membrane protein, OmpA/MotB family [Burkholderia ubonensis
Bu]
Length = 165
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 79/165 (47%), Gaps = 11/165 (6%)
Query: 1 MQYSTIFIILSAITMMSIS----------GIDNLDTKISSPDTVLNESSLQEQFSSSVGD 50
M + + ++ + ++ G++ + + L S
Sbjct: 1 MNKTNRYAVIVVLALLGGCHHAAKTPENAGMNQGAVGQAPGTPSVVTDELNNPNSPLAKR 60
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAV 109
S++FD +Y ++ + +L +L +H LI+G+ DE G+ ++ALG RR++AV
Sbjct: 61 SIYFDFDAYDVKSEYLTLLQAHADYLRRHPSQRVLIQGNTDERGTSEYNLALGQRRSHAV 120
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ V G+ ++++ S+GKE P GHDE ++++NRRA + +
Sbjct: 121 MSALVTLGVPETQLEAVSFGKEKPVALGHDEASWSQNRRADMVYR 165
>gi|162456085|ref|YP_001618452.1| OmpA domain-containing protein [Sorangium cellulosum 'So ce 56']
gi|161166667|emb|CAN97972.1| OmpA domain protein [Sorangium cellulosum 'So ce 56']
Length = 210
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/160 (21%), Positives = 60/160 (37%), Gaps = 14/160 (8%)
Query: 8 IILSAITMMSISGIDNLDTKIS------------SPDTVLNESSLQEQFSSSVGDSVFFD 55
+ A+ ++ G+ + + P E + + + + F+
Sbjct: 37 LTAMALGSIACGGVTTFEGGKALAVVGRPPAPPPPPPPPPPERVVVTDDKIIINEKIQFE 96
Query: 56 TSSYSIRPADIQVLSNLGSWLEKHD--CDFLIEGHADELGSRNSSIALGLRRAYAVFNYF 113
+IR +L + ++KH IEGHA GS + ++ L RRA AV Y
Sbjct: 97 YDQATIRTESHSLLDEVVGTIKKHTHIKKIAIEGHASAEGSEDHNLKLSDRRAKAVMKYL 156
Query: 114 VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V GI+A + +GK P + KNRR +
Sbjct: 157 VDHGIAAGMLTAKGFGKSKPIADNDTPEGREKNRRVEFNI 196
>gi|84684107|ref|ZP_01012009.1| OmpA/MotB domain protein [Maritimibacter alkaliphilus HTCC2654]
gi|84667860|gb|EAQ14328.1| OmpA/MotB domain protein [Rhodobacterales bacterium HTCC2654]
Length = 481
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 4/119 (3%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG----SWLEKHDCDFLIEGHADEL 92
++ G + F T S + A + +++++ +K I GH D
Sbjct: 359 QACNDAAAQVQAGRQIQFVTGSAELDTASMSIINDMAGLLLHCTDKIGMRVTIGGHTDSQ 418
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
G N + L + RA AV + VARG+ A RM+ +G+ P E+ A NRR
Sbjct: 419 GDDNENYRLSVARANAVRDALVARGVPAGRMQALGFGETEPIADNDTEEGRAANRRTTF 477
>gi|307301173|ref|ZP_07580935.1| OmpA/MotB domain protein [Sinorhizobium meliloti BL225C]
gi|307321074|ref|ZP_07600479.1| OmpA/MotB domain protein [Sinorhizobium meliloti AK83]
gi|306893246|gb|EFN24027.1| OmpA/MotB domain protein [Sinorhizobium meliloti AK83]
gi|306903629|gb|EFN34216.1| OmpA/MotB domain protein [Sinorhizobium meliloti BL225C]
Length = 227
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHA 89
T ++ + ++ ++ ++ F T + PA L ++ L K + ++GH
Sbjct: 98 QGTGVSVTRAGDRIILNMPSNITFATDRDQVIPAFYSTLDSVAIVLRKFNKTLIDVDGHT 157
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GS + + L RRA +V NY +RG+ RM YG E P E A+NRR
Sbjct: 158 DSTGSASYNQGLSERRAASVANYLASRGVDQRRMSAVGYGLERPIASNATEVGRAQNRRV 217
Query: 150 IVFL 153
+ +
Sbjct: 218 EISI 221
>gi|296313347|ref|ZP_06863288.1| OmpA family protein [Neisseria polysaccharea ATCC 43768]
gi|296840164|gb|EFH24102.1| OmpA family protein [Neisseria polysaccharea ATCC 43768]
Length = 225
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 51/124 (41%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHA 89
T + Q + ++V F T S + L+ ++ D I GH
Sbjct: 89 TGTQVQVQRQGNQIKLVMPENVTFATGSAVLSNNAQFALNTAAQTLVQYPDTTLTINGHT 148
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GS + L RA AV Y +RG++ASR+ V YG MP + A+NRR
Sbjct: 149 DNTGSDAVNNPLSQHRAQAVAYYLQSRGVAASRLAVYGYGSHMPVASNATAEGRAQNRRV 208
Query: 150 IVFL 153
+ +
Sbjct: 209 EILI 212
>gi|209522485|ref|ZP_03271080.1| type IV / VI secretion system protein, DotU family [Burkholderia
sp. H160]
gi|209497081|gb|EDZ97341.1| type IV / VI secretion system protein, DotU family [Burkholderia
sp. H160]
Length = 444
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 45/126 (35%), Gaps = 4/126 (3%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG----S 94
++ ++ F + S ++ PA ++ + L+ ++ GH D+
Sbjct: 319 ETADRSIVTITGDNLFASGSATLDPAYDALIGRIAEALKSVPGKIVVTGHTDDQRLVSAR 378
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
S+ L RA +V + + +R G P AKNRR + L
Sbjct: 379 FPSNWHLSQARAESVRAMLASLSGAPARFSAEGRGDAEPLASNETPAGRAKNRRVEITLL 438
Query: 155 GCRANT 160
A++
Sbjct: 439 APGASS 444
>gi|220925333|ref|YP_002500635.1| peptidoglycan-associated lipoprotein [Methylobacterium nodulans ORS
2060]
gi|219949940|gb|ACL60332.1| peptidoglycan-associated lipoprotein [Methylobacterium nodulans ORS
2060]
Length = 172
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 51/149 (34%), Positives = 72/149 (48%), Gaps = 5/149 (3%)
Query: 12 AITMMSISGIDN----LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQ 67
A+++ + S + + F +VGD VFF+T S + P
Sbjct: 20 ALSIAACSSNKDLADASAYAAGGGAGGAATPGSAQDFVVNVGDRVFFETDSTDLTPTATA 79
Query: 68 VLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT 126
L W FLIEGHADE G+R + +LG RRA V +Y +RGI+ SRM+
Sbjct: 80 TLDKQAQWLSRYPHYTFLIEGHADERGTREYNFSLGARRAQTVRDYLASRGIAGSRMRTV 139
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
SYGKE P +D +++NRRA+ L G
Sbjct: 140 SYGKERPVAVCNDISCWSQNRRAVTVLDG 168
>gi|149928286|ref|ZP_01916529.1| OmpA/MotB [Limnobacter sp. MED105]
gi|149823015|gb|EDM82257.1| OmpA/MotB [Limnobacter sp. MED105]
Length = 218
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLR 104
S+ +FD +++ + + + + GH D +GS + L R
Sbjct: 102 VSLEADAYFDFDKATLKQGGKDRIDSEIAKLGQVDLNSVIAIGHTDSIGSDAYNQKLSER 161
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA AV +Y V++G+SA R+++ G+ P + AKNRR +
Sbjct: 162 RAQAVKDYMVSKGVSADRIQIKGMGESQPVADNKTREGRAKNRRVEI 208
>gi|70734242|ref|YP_257882.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
gi|68348541|gb|AAY96147.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
Length = 164
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 60/154 (38%), Gaps = 6/154 (3%)
Query: 6 IFIILSAITMMSISGIDNLDTKISSPDTVLNESS-----LQEQFSSSVGDSVFFDTSSYS 60
+F L + +++++G ++ K +P + E ++ + V F + +
Sbjct: 8 LFSTLVFMALLALAGCQSVPPKGLTPKQIAVLKQEGFELTDEGWAFGLSGKVLFGSDVET 67
Query: 61 IRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
+ A +++ +G L ++GH D G ++ L +RRA +V G+
Sbjct: 68 LNQASTEIVQRIGKALLSVDIQKVRVDGHTDASGKEAYNVQLSVRRAKSVVKVLTQVGMR 127
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+++ G P +NRR + +
Sbjct: 128 EENIQLRGLGSSEPVASNSTVAGRTENRRVSIVV 161
>gi|126698325|ref|YP_001087222.1| putative chemotaxis protein [Clostridium difficile 630]
gi|115249762|emb|CAJ67579.1| putative OmpA/MotB proton channel [Clostridium difficile]
Length = 248
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 50/136 (36%), Gaps = 5/136 (3%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGH 88
+ ++ S+ D++ FDT ++ + +G L + + +EGH
Sbjct: 104 NGMANSVSLRVQDRGLVISLKDTILFDTGKAIVKDNSRDKIIQIGKMLNEMNSYMRVEGH 163
Query: 89 ADELGS----RNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVYGHDEDAY 143
D + S+ L + RA V + ++ YG+ P E+
Sbjct: 164 TDNMSIKNSEFKSNWDLSVMRATNVVQLLIDNAGIAPDKLSAVGYGEFRPIAENSSEEGR 223
Query: 144 AKNRRAIVFLKGCRAN 159
+KNRR + L + +
Sbjct: 224 SKNRRVDIVLVDSKYD 239
>gi|28868712|ref|NP_791331.1| ompA family protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213969090|ref|ZP_03397229.1| ompA family protein [Pseudomonas syringae pv. tomato T1]
gi|301384017|ref|ZP_07232435.1| ompA family protein [Pseudomonas syringae pv. tomato Max13]
gi|302058723|ref|ZP_07250264.1| ompA family protein [Pseudomonas syringae pv. tomato K40]
gi|302131685|ref|ZP_07257675.1| ompA family protein [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|28851951|gb|AAO55026.1| ompA family protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213926088|gb|EEB59644.1| ompA family protein [Pseudomonas syringae pv. tomato T1]
gi|331016335|gb|EGH96391.1| ompA family protein [Pseudomonas syringae pv. lachrymans str.
M302278PT]
Length = 260
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 2/140 (1%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW- 75
+ + ++ D +I++ LN + + GD V FD + ++P + L ++
Sbjct: 110 AKARLEARDAQIAALKNSLNAKQTERGTLVTFGD-VLFDYNKAELKPTAQGDIGKLAAFL 168
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
E D ++EG+ D GS + + +L RRA +V V G+ +R+ YGKE P
Sbjct: 169 QENTDRKVIVEGYTDSTGSASYNQSLSERRANSVRMALVRMGVDPARVVTMGYGKEYPVA 228
Query: 136 YGHDEDAYAKNRRAIVFLKG 155
A NRR V +
Sbjct: 229 DNSSNSGRAMNRRVEVTISN 248
>gi|19705338|ref|NP_602833.1| Outer membrane protein [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|19705349|ref|NP_602844.1| Outer membrane protein [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|19713317|gb|AAL94132.1| Outer membrane protein [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|19713330|gb|AAL94143.1| Outer membrane protein [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
Length = 151
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+LN + +E S+ FD +++P +L+N+ ++E+++ + I GH D +
Sbjct: 17 DILNSEAPKEMTIVLDERSLNFDFDKSNVKPQYYDLLNNIKEFVEQNNYEITIVGHTDSI 76
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIV 151
GS + L RRA +V + G+S R+ + + G+E P ++ A+NRR
Sbjct: 77 GSNAYNFKLSRRRAESVKAKLLEFGLSEDRIVGIEAMGEEQPIATNATKEGRAQNRRVEF 136
Query: 152 FL 153
L
Sbjct: 137 KL 138
>gi|322421034|ref|YP_004200257.1| OmpA/MotB domain-containing protein [Geobacter sp. M18]
gi|320127421|gb|ADW14981.1| OmpA/MotB domain protein [Geobacter sp. M18]
Length = 292
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 57/135 (42%), Gaps = 8/135 (5%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-I 85
K + S L+ + + ++ DSV FD+ ++P + VL + L+ + I
Sbjct: 154 KGEMAKGQVTISELKGKLTVNMVDSVLFDSGKAEVKPEGLVVLQKVIDILKNIKDKVVRI 213
Query: 86 EGHADELGS-------RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
EGH D + ++ L RA V Y +G+ + + +YG+ P
Sbjct: 214 EGHTDNVQIVGQLAKRYPTNWELSAARAINVTRYLQQQGLDPALLAAVAYGEHKPVAPND 273
Query: 139 DEDAYAKNRRAIVFL 153
++ AKNRR + L
Sbjct: 274 TDEGRAKNRRIEIVL 288
>gi|213969192|ref|ZP_03397331.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
tomato T1]
gi|213926190|gb|EEB59746.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae pv.
tomato T1]
Length = 151
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 39/127 (30%), Positives = 71/127 (55%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL 84
+T + SL E+ + + +F+ S ++P ++ L L+ + +
Sbjct: 23 PNAGYGANTGAVDGSLSEEAALRAITTFYFEYDSSDLKPEAMRSLDVHAKDLKANGARVV 82
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+EG+ DE G+R ++ALG RRA AV Y V +G+S +++++ SYG+E P G+DE ++A
Sbjct: 83 LEGNTDERGTREYNMALGERRAKAVQRYLVLQGVSPAQLELVSYGEERPVATGNDEQSWA 142
Query: 145 KNRRAIV 151
+NRR +
Sbjct: 143 QNRRVEL 149
>gi|49188511|ref|YP_025325.1| OmpA [Pseudomonas alcaligenes]
gi|5123490|gb|AAD40344.1|U88088_22 OmpA [Pseudomonas alcaligenes]
Length = 220
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHAD 90
+ + ++ + ++ F T I+P L+ L + ++ GH D
Sbjct: 88 GSGVQVERQGDEIVIVMPGAITFATGKAEIQPNFANTLNQLAGSFRNYPDSRLIVTGHTD 147
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
+GS ++ L RRA +V + G+ R++V G P + A+NRR
Sbjct: 148 SVGSYEANELLSQRRAQSVAQFLRGNGVQTDRIEVIGAGPNQPVASNATAEGRAQNRRVE 207
Query: 151 VFL 153
+ L
Sbjct: 208 IKL 210
>gi|319943060|ref|ZP_08017343.1| lipoprotein [Lautropia mirabilis ATCC 51599]
gi|319743602|gb|EFV96006.1| lipoprotein [Lautropia mirabilis ATCC 51599]
Length = 319
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 50/135 (37%), Gaps = 1/135 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
+ ++ V + + + + F +S +I P +L +
Sbjct: 103 EQKRAMEEATAGTGVQVTQTRENLLQLDIPSDISFRVNSAAILPNFQPILDRFAQTLVAN 162
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
I GH D G+ + L + RA + +Y VARG+ SR+ + G P
Sbjct: 163 PATTVQIIGHTDSTGTDAINNPLSVNRAASARDYLVARGVQVSRIMIDGRGSRDPIADNS 222
Query: 139 DEDAYAKNRRAIVFL 153
A+NRR +++
Sbjct: 223 TPAGRAQNRRVEIYV 237
>gi|237747505|ref|ZP_04577985.1| outer membrane protein A [Oxalobacter formigenes HOxBLS]
gi|229378856|gb|EEO28947.1| outer membrane protein A [Oxalobacter formigenes HOxBLS]
Length = 207
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 2/143 (1%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
++ G D T+ ++ V + + D+ FFD ++P L L + L
Sbjct: 63 AVPGCDGPLTQPAAAAPVAVAPVPTAEKVTYAADA-FFDFDKSIVKPEGKAKLDELVNAL 121
Query: 77 EKHDCDFLI-EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
D + ++ GH D +G+ + L RRA AV Y V++G+ A ++ GK+ P
Sbjct: 122 SGLDTEVIVAVGHTDWIGTDAYNQKLSERRANAVKAYLVSKGVPAEKIFTEGKGKKQPIA 181
Query: 136 YGHDEDAYAKNRRAIVFLKGCRA 158
AKNRR V + R
Sbjct: 182 DNKTRQGRAKNRRVEVEVVANRG 204
>gi|189220464|ref|YP_001941104.1| Outer membrane protein or related peptidoglycan-associated
(lipo)protein [Methylacidiphilum infernorum V4]
gi|189187322|gb|ACD84507.1| Outer membrane protein or related peptidoglycan-associated
(lipo)protein [Methylacidiphilum infernorum V4]
Length = 179
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 14/158 (8%)
Query: 7 FIILSAITMMSISGIDNLDTKISSPDTVLNE-------------SSLQEQFSSSVGDSVF 53
F++ + +++ +G P +S ++
Sbjct: 16 FLVFLFVLIIAAAGCAKHPKGKERPTPEEETLESSPLPSRGEFNPDFDVDYSPLKDQVIY 75
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F S +I ++ + + W+ +H L+ GH DE G+ + LG RRA AV Y
Sbjct: 76 FAFDSAAIPGSERGKIEKIADWMNQHPQLSILLAGHCDERGTEEYNRGLGERRAIAVREY 135
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
+ GISA ++ SYGK+ P GH E YAKNRR
Sbjct: 136 LIGLGISAEKIHTISYGKDRPIAIGHTEADYAKNRRVE 173
>gi|326568759|gb|EGE18829.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis BC8]
Length = 171
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 40/157 (25%), Positives = 76/157 (48%), Gaps = 9/157 (5%)
Query: 4 STIFIILSAITMMSISGIDNLDTKISS--------PDTVLNESSLQEQFSSSVGDSVFFD 55
++ ++ S S + + +++ + +S + V+FD
Sbjct: 13 LSVLTFMTGCANKSTSQVMVAPNAPTGYTGVIYTGVAPLVDNDETVKALASKLPSLVYFD 72
Query: 56 TSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
S I+P +L + L+ GH DE GSR +++LG RRA AV NY +
Sbjct: 73 FDSDEIKPQAAAILDEQAQFLTTNQTARVLVAGHTDERGSREYNMSLGERRAVAVRNYLL 132
Query: 115 ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+GI+ + +++ S+G+E P +G +E+A+++NRRA +
Sbjct: 133 GKGINQASVEIISFGEERPIAFGTNEEAWSQNRRAEL 169
>gi|300853354|ref|YP_003778338.1| putative flagellar motor protein MotB [Clostridium ljungdahlii DSM
13528]
gi|300433469|gb|ADK13236.1| predicted flagellar motor protein MotB [Clostridium ljungdahlii DSM
13528]
Length = 283
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 53/139 (38%), Gaps = 5/139 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ ++ + S+ +++FFDT I+P L +G + + +E
Sbjct: 111 AANGLSQSVSSQIDERGLVVSLSNTLFFDTGKAEIKPEIQNTLMGIGKMINQMGNSIRVE 170
Query: 87 GHADELGS----RNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDED 141
GH D + S+ L RA V + + I ++ YG+ +
Sbjct: 171 GHTDNVPISNNEYASNWQLSCARAANVTQFLQNKVGIKPEKLTSVGYGEYRSVTDNSTDA 230
Query: 142 AYAKNRRAIVFLKGCRANT 160
AKNRR + ++ + N+
Sbjct: 231 NRAKNRRVDIIIESNKFNS 249
>gi|150377808|ref|YP_001314403.1| OmpA/MotB domain-containing protein [Sinorhizobium medicae WSM419]
gi|150032355|gb|ABR64470.1| OmpA/MotB domain protein [Sinorhizobium medicae WSM419]
Length = 420
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 64/147 (43%), Gaps = 4/147 (2%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVF---FDTSSYSIRPAD 65
+L A +++ + + ++ P ++ S+Q+ + V FDT +++P+
Sbjct: 35 LLMAGALLAGTNTPSWSQSMTDPVNRYSKESMQQALQTREQYDVHGLSFDTGQSTLQPSA 94
Query: 66 IQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L ++ + L+ I GH D GS S+ L L RA + V RGI A ++
Sbjct: 95 KPLLDDIATALKNFPDWGLRIVGHTDASGSAESNERLSLERADTIKAALVERGIDAGKLL 154
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIV 151
G+ P ++ A NRR +
Sbjct: 155 AAGAGQNRPIASNETDEGRALNRRVEL 181
>gi|307578587|gb|ADN62556.1| OmpA family protein [Xylella fastidiosa subsp. fastidiosa GB514]
Length = 240
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 1/125 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGH 88
+ +T ++ + + ++ D + FD ++P L N+ S E + + G+
Sbjct: 102 TANTGIDVKRDGDNITLNLPDGITFDFGKSMLKPQFYGALKNVASTLREYNQTMIEVVGY 161
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D +GS + L RA AV +Y A+G+ RM+++ GK P E +KNRR
Sbjct: 162 TDSIGSDVVNQRLSEDRAGAVASYLAAQGVQRERMEISGMGKRYPIADNSTEAGRSKNRR 221
Query: 149 AIVFL 153
+ L
Sbjct: 222 VEIHL 226
>gi|317064862|ref|ZP_07929347.1| outer membrane protein [Fusobacterium ulcerans ATCC 49185]
gi|313690538|gb|EFS27373.1| outer membrane protein [Fusobacterium ulcerans ATCC 49185]
Length = 211
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 62/123 (50%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+T + S + + ++ V F T S +I + L+++ + ++ + ++ G+ D
Sbjct: 84 NTEVQVSQNGDNLNLNLPGGVTFATDSSNIVSSFYGPLNSIATVLVQYPETRIIVNGYTD 143
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
+GS + +++L RRA +V NY + +G+SA R+ YG E P A+NRR
Sbjct: 144 NVGSASYNVSLSERRAASVRNYLIQQGVSARRISYVGYGMENPRATNSTAAGRAENRRVE 203
Query: 151 VFL 153
+ +
Sbjct: 204 LEI 206
>gi|302135199|ref|ZP_07261189.1| outer membrane porin OprF [Pseudomonas syringae pv. tomato NCPPB
1108]
Length = 344
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 4/138 (2%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD + ++P + + NL ++++
Sbjct: 203 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFNKSVVKPNSMGDIKNLADFMQQ 262
Query: 79 H-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVY 136
+ +EGH D +G + L RRA AV V + ASR+ YG+ P
Sbjct: 263 YPQTTTTVEGHTDSVGPDAYNQKLSERRANAVKQVLVNQYGVGASRVNSVGYGESRPVAD 322
Query: 137 GHDEDAYAKNRRAIVFLK 154
+ A NRR ++
Sbjct: 323 NATDAGRAVNRRVEAEVE 340
>gi|257453597|ref|ZP_05618887.1| OmpA/MotB [Enhydrobacter aerosaccus SK60]
gi|257449055|gb|EEV24008.1| OmpA/MotB [Enhydrobacter aerosaccus SK60]
Length = 385
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 44/138 (31%), Gaps = 5/138 (3%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI 85
+ D E + + + VFFD I+ + + + ++
Sbjct: 240 NVVVDADGCPREIPIDDALRMEL--RVFFDNDKTVIKDQYKPEIQKVAEKMNEYPNSTAS 297
Query: 86 EGHADEL--GSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVYGHDEDA 142
S + L RA AV + V + R+ YG + P + +
Sbjct: 298 IEGHASKTGPSARYNQRLSEARANAVKSMLVNQFGVAPQRISTVGYGYDRPIADNNTAEG 357
Query: 143 YAKNRRAIVFLKGCRANT 160
A NRR + G ++ T
Sbjct: 358 RAMNRRVYAIITGNKSGT 375
>gi|256027094|ref|ZP_05440928.1| Outer membrane protein [Fusobacterium sp. D11]
gi|289765073|ref|ZP_06524451.1| outer membrane protein [Fusobacterium sp. D11]
gi|289716628|gb|EFD80640.1| outer membrane protein [Fusobacterium sp. D11]
Length = 151
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 3/128 (2%)
Query: 34 VLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG 93
L E +E ++ FD ++P ++L+NL ++EK+D + I GH D +
Sbjct: 3 ALKEEPPEEMTIVLDDRALNFDFDKSVVKPQYNEMLTNLKDFIEKNDYEVTIVGHTDYIA 62
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
S ++ L RRA AV + G+ SR+ + G+E P + AKNRR
Sbjct: 63 SNAYNMGLSKRRAEAVKAKLIELGLDPSRIVGIVPRGEEEPIADNATTEGRAKNRRVEFK 122
Query: 153 L--KGCRA 158
L +G +
Sbjct: 123 LVKRGSKG 130
>gi|4580973|gb|AAD24560.1|AF117968_1 OprF [Pseudomonas resinovorans]
Length = 340
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 53/133 (39%), Gaps = 4/133 (3%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD ++ + NL ++ +
Sbjct: 208 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKAKVKEESYGDIKNLADFMNQ 267
Query: 79 HDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVY 136
+ +EGH D +G+ + L RRA AV + V + + R+ YG+ P
Sbjct: 268 YPATTTTVEGHTDSVGTDAYNQKLSERRADAVRDVLVDQYGVGSERVNAVGYGETRPVAD 327
Query: 137 GHDEDAYAKNRRA 149
D A NRR
Sbjct: 328 NATADGRAVNRRV 340
>gi|54309710|ref|YP_130730.1| putative peptidoglycan-associated lipoprotein [Photobacterium
profundum SS9]
gi|46914148|emb|CAG20928.1| putative peptidoglycan-associated lipoprotein [Photobacterium
profundum SS9]
Length = 174
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 50/173 (28%), Positives = 74/173 (42%), Gaps = 21/173 (12%)
Query: 1 MQYSTIF----IILSAITMMSIS----------------GIDNLDTKISSPDTVLNESSL 40
MQ + I I L +T+ + S + T +
Sbjct: 1 MQLNKILKGLAIALPMMTLAACSSTDSTDSSAASETTDGSTQTVVTTPVDGGSAALSEQE 60
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSI 99
+V+F + I+ +L + D ++EGHADE G+ +I
Sbjct: 61 LRSQELRQEQTVYFKFDTAEIQADYQAMLEAHAEFLSNSSDVKVIVEGHADERGTPEYNI 120
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
ALG RRA AV Y A G+SAS++ + SYG+E P V GH + YAKNRRA++
Sbjct: 121 ALGERRANAVVQYLQALGVSASQISIVSYGEEKPLVLGHTDADYAKNRRAVLV 173
>gi|220932514|ref|YP_002509422.1| OmpA/MotB domain protein [Halothermothrix orenii H 168]
gi|219993824|gb|ACL70427.1| OmpA/MotB domain protein [Halothermothrix orenii H 168]
Length = 245
Score = 82.9 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 46/125 (36%), Gaps = 5/125 (4%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSS- 98
+ + V +D I+P ++L + +EK + +EGH D N
Sbjct: 115 TKRGLVVRLTGQVLYDIGKAEIKPGGKRLLDEIAGIIEKIPNEIAVEGHTDNWPIHNEQF 174
Query: 99 ---IALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L RA V YF+ R I SR+ Y + P + AKNRR + +
Sbjct: 175 PSNWELSTTRATNVIKYFIERHGIDPSRLSAAGYSEYRPLYPNDTVEHRAKNRRVEIVIL 234
Query: 155 GCRAN 159
N
Sbjct: 235 NTLHN 239
>gi|294649621|ref|ZP_06727038.1| OmpA family protein [Acinetobacter haemolyticus ATCC 19194]
gi|292824498|gb|EFF83284.1| OmpA family protein [Acinetobacter haemolyticus ATCC 19194]
Length = 217
Score = 82.5 bits (202), Expect = 1e-14, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 53/128 (41%), Gaps = 1/128 (0%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLI 85
+ V + + S+ FDT+ +I+P L+ + E + L+
Sbjct: 86 QQMQGTGVDVGRNPDGSVQLIMPGSITFDTNKSNIKPNFYATLNKVAQVLGEDNQSAILV 145
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
G+ D G+ + +I L RA +V NY +GI+++R+ YG P +
Sbjct: 146 TGYTDNTGNDSINIPLSQARAQSVKNYLAGKGIASNRIDAQGYGSSNPIADNSTAAGREQ 205
Query: 146 NRRAIVFL 153
NRR + +
Sbjct: 206 NRRVEISI 213
>gi|146339724|ref|YP_001204772.1| putative Outer membrane protein and related
peptidoglycan-associated (lipo)proteins [Bradyrhizobium
sp. ORS278]
gi|146192530|emb|CAL76535.1| Conserved hypothetical protein; Putative Outer membrane protein and
related peptidoglycan-associated (lipo)proteins
[Bradyrhizobium sp. ORS278]
Length = 707
Score = 82.5 bits (202), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 49/126 (38%), Gaps = 1/126 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGH 88
+ + F T S + + +L ++ ++ + IEGH
Sbjct: 582 ESPPLAVAECQPAFEGLLAKGRIRFATGSAELSRESLALLDHIVDVAQRCKEAEITIEGH 641
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D +G+ +I L RRA AV +Y GI SRM YG+ P + A+NRR
Sbjct: 642 TDNVGNEADNIDLSKRRAAAVVSYISEAGIDTSRMSSEGYGQNRPVASNDSAEGRAQNRR 701
Query: 149 AIVFLK 154
+K
Sbjct: 702 IEFVVK 707
>gi|238028341|ref|YP_002912572.1| OmpA family protein [Burkholderia glumae BGR1]
gi|237877535|gb|ACR29868.1| OmpA family protein [Burkholderia glumae BGR1]
Length = 219
Score = 82.5 bits (202), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 1/136 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
I N + +V SV F T Y+I PA +L+ L + +
Sbjct: 74 AIKNRLAPSAQSTGTQVTEQPDGSLKLNVPSSVTFATDQYAITPAFAPLLNELATSLNQN 133
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ G+ D GS ++ L RA +V V RG++ SR+ G P
Sbjct: 134 PQITASVVGYTDSTGSAAHNLTLSQNRAQSVVTALVQRGVAGSRLSAQGMGASNPVADNA 193
Query: 139 DEDAYAKNRRAIVFLK 154
+ A+NRR ++L+
Sbjct: 194 TDAGRAQNRRVEIYLR 209
>gi|149915621|ref|ZP_01904147.1| peptidoglycan-associated lipoprotein [Roseobacter sp. AzwK-3b]
gi|149810513|gb|EDM70356.1| peptidoglycan-associated lipoprotein [Roseobacter sp. AzwK-3b]
Length = 171
Score = 82.5 bits (202), Expect = 1e-14, Method: Composition-based stats.
Identities = 48/127 (37%), Positives = 68/127 (53%), Gaps = 1/127 (0%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEG 87
+ ++ + F ++GD V F ++ VL W + D +IEG
Sbjct: 40 AGMAGSASDPTSPLYFQQTIGDRVLFAVDQSTLSSEAQAVLDGQAQWLMTNIDYSAVIEG 99
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
HADE G+R ++ALG RRA AV Y V+RGI+ +R+KV SYGKE P +E YAKNR
Sbjct: 100 HADEQGTREYNLALGARRANAVQEYLVSRGIAGNRLKVVSYGKERPIELCSNEACYAKNR 159
Query: 148 RAIVFLK 154
RA+ +
Sbjct: 160 RAVTVIS 166
>gi|292489492|ref|YP_003532380.1| putative type VI secretion system core protein [Erwinia amylovora
CFBP1430]
gi|292898296|ref|YP_003537665.1| outer membrane protein [Erwinia amylovora ATCC 49946]
gi|291198144|emb|CBJ45249.1| putative outer membrane protein [Erwinia amylovora ATCC 49946]
gi|291554927|emb|CBA22885.1| putative type VI secretion system, core protein [Erwinia amylovora
CFBP1430]
gi|312173666|emb|CBX81920.1| putative type VI secretion system, core protein [Erwinia amylovora
ATCC BAA-2158]
Length = 413
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 48/130 (36%), Gaps = 4/130 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+ ++ ++ F ++S +R +VL + + + L+ G++D +
Sbjct: 273 VAVRDEADRSVVTLKGDGLFTSASTEVRGRYAEVLDRVAAAMNSVSGRILVVGYSDNVPI 332
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
S+ L L RA +V R+K G+ P + A+NRR
Sbjct: 333 RSARFASNYELSLARAQSVSEQLQQHLTQPQRVKAEGRGESNPLAPNNSAGNRARNRRVE 392
Query: 151 VFLKGCRANT 160
+ L +T
Sbjct: 393 ITLLVSPGST 402
>gi|153872253|ref|ZP_02001198.1| outer membrane protein OprF [Beggiatoa sp. PS]
gi|152071282|gb|EDN68803.1| outer membrane protein OprF [Beggiatoa sp. PS]
Length = 175
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/173 (19%), Positives = 62/173 (35%), Gaps = 20/173 (11%)
Query: 1 MQYSTIFIILSAITMMSIS----------GIDNLDTKISSPDTVLNESSLQEQFSSSVGD 50
M +T+ I+ +++ ++ + + P + V D
Sbjct: 1 MNNTTLSILFASLLILFGNIAYADEVLFPTTAAKIIEALQPTLQSKGLGSSKGLGDVVTD 60
Query: 51 S-------VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--LIEGHADELGSRNSSIAL 101
+ ++FDT +I+ +L L+ I GH D G ++ L
Sbjct: 61 APPKVAALIYFDTDCPAIKANSYTLLREYAEALKTGLASVKLEIGGHTDSSGPAYYNLTL 120
Query: 102 GLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+RA AV ++ A + +R+ V YG+ P D AKNRR +
Sbjct: 121 SKKRAQAVKDFLVFAYAVEDNRLIVKGYGETQPIASNRTRDGQAKNRRVEFKV 173
>gi|315225528|ref|ZP_07867338.1| OmpA-OmpF porin family protein [Capnocytophaga ochracea F0287]
gi|314944472|gb|EFS96511.1| OmpA-OmpF porin family protein [Capnocytophaga ochracea F0287]
Length = 456
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 54/127 (42%), Gaps = 1/127 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFL 84
+S + + ++ + ++ FD + +I+P VL+ + + + F
Sbjct: 326 PGPASNNGCPEVTEEVQKKLNDFARTILFDVNKATIKPQSATVLNQIVDVLNQYKNAKFS 385
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
IEG+ D G R+ + L RAY+V Y + +GI R+ +G + P +
Sbjct: 386 IEGYTDISGKRDKNQKLSEDRAYSVKAYLIEKGIDEGRLTAKGFGPDKPIASNKTKKGRE 445
Query: 145 KNRRAIV 151
NRR +
Sbjct: 446 LNRRVEI 452
>gi|296271167|ref|YP_003653799.1| OmpA/MotB domain-containing protein [Thermobispora bispora DSM
43833]
gi|296093954|gb|ADG89906.1| OmpA/MotB domain protein [Thermobispora bispora DSM 43833]
Length = 176
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 55/130 (42%), Gaps = 7/130 (5%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ + E+ + ++ + S+ V F + + ++ L L+ L+EGH D
Sbjct: 47 EPLEVETQVGDRTTVSISSDVLFAFDKADLTEVAKRRIAELAKRLQNVKGVVLVEGHTDA 106
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG------HDEDAYAK 145
LGS ++ L RA AV ++ + ++K YG+ P + + AK
Sbjct: 107 LGSAAYNLRLSRLRANAVKEEL-SKAVPGLQIKAVGYGETRPIAPNKTKDGKDNPEGRAK 165
Query: 146 NRRAIVFLKG 155
NRR + +G
Sbjct: 166 NRRVTISYRG 175
>gi|255305748|ref|ZP_05349920.1| putative chemotaxis protein [Clostridium difficile ATCC 43255]
Length = 246
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 50/136 (36%), Gaps = 5/136 (3%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGH 88
+ ++ S+ D++ FDT ++ + +G L + + +EGH
Sbjct: 102 NGMANSVSLRVQDRGLVISLKDTILFDTGKAIVKDNSRDKIIQIGKMLNEMNSYMRVEGH 161
Query: 89 ADELGS----RNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVYGHDEDAY 143
D + S+ L + RA V + ++ YG+ P E+
Sbjct: 162 TDNMSIKNSEFKSNWDLSVMRATNVVQLLIDNAGIAPDKLSAVGYGEFRPIAENSSEEGR 221
Query: 144 AKNRRAIVFLKGCRAN 159
+KNRR + L + +
Sbjct: 222 SKNRRVDIVLVDSKYD 237
>gi|298530630|ref|ZP_07018032.1| OmpA/MotB domain protein [Desulfonatronospira thiodismutans ASO3-1]
gi|298510004|gb|EFI33908.1| OmpA/MotB domain protein [Desulfonatronospira thiodismutans ASO3-1]
Length = 241
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 47/115 (40%), Gaps = 1/115 (0%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG-SRNSSI 99
E + + + F + ++P Q+L + ++ + G+ D + +
Sbjct: 120 PEGIALMMTGELLFPFAETRLQPQARQILDQVIPLVKAWPAPVNVAGYTDNIPGIHMDNY 179
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RA AV Y + + R+ V++YG+ P E+ A+NRR + LK
Sbjct: 180 EFAAERAMAVMEYLLINDVKQQRLSVSAYGEHFPVGDNETEEGRARNRRVEILLK 234
>gi|149203135|ref|ZP_01880106.1| OmpA/MotB [Roseovarius sp. TM1035]
gi|149143681|gb|EDM31717.1| OmpA/MotB [Roseovarius sp. TM1035]
Length = 210
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 48/115 (41%), Gaps = 1/115 (0%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSS 98
++ ++ + F ++ PA L + L+ + + GH D G +
Sbjct: 92 TGDRLILTMPQDILFPVDGATVAPALRDDLFKVSQSLQAYPNTTVQVVGHTDSDGDAGYN 151
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L LRRA AV + + G+ +R++ G++ P + A+NRR + +
Sbjct: 152 QGLSLRRANAVADVLASGGVPYARLRAIGRGEDQPVASNLTSEGKAQNRRVEIVI 206
>gi|126737228|ref|ZP_01752963.1| peptidoglycan-associated lipoprotein [Roseobacter sp. SK209-2-6]
gi|126721813|gb|EBA18516.1| peptidoglycan-associated lipoprotein [Roseobacter sp. SK209-2-6]
Length = 172
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 47/161 (29%), Positives = 70/161 (43%), Gaps = 6/161 (3%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLN-----ESSLQEQFSSSVGDSVFFD 55
M +L+ + +S D S + + F VGD V F
Sbjct: 8 MSGLKKATLLAVVLGLSACSNAVWDNAGGSGTGTSPGGSNLDPASPAYFQQEVGDRVLFP 67
Query: 56 TSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
++ +L W D I+GHADE G+R ++ALG RRA ++ +
Sbjct: 68 VDQSTLSAEATTILQGQARWLTANPDYVVTIQGHADEQGTREYNLALGARRANEARDFLI 127
Query: 115 ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+GI+ +R++V S+GKE P E YAKNRRA+ L G
Sbjct: 128 GQGIAGTRIQVVSFGKERPLEICSAESCYAKNRRAVTVLAG 168
>gi|124009612|ref|ZP_01694285.1| thrombospondin type 3 repeat:OmpA/MotB [Microscilla marina ATCC
23134]
gi|123984753|gb|EAY24733.1| thrombospondin type 3 repeat:OmpA/MotB [Microscilla marina ATCC
23134]
Length = 493
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 59/148 (39%), Gaps = 5/148 (3%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQE----QFSSSVGDSVFFDTSSYSIRPADI 66
+ + + + D D + +++ V F I P
Sbjct: 343 AGLAEFNGCPDRDKDGVPDKVDNCPDVPGVKDNRGCPEVLERASKVLFAPGKAIINPVSF 402
Query: 67 QVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
VL+ L L+K+ +EGH D G ++++ L RA AV +Y + +GI+ SR++
Sbjct: 403 PVLNELSELLKKYASTKIYLEGHTDNQGDDDANLKLSKDRAQAVADYLIKKGIAKSRIES 462
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
T +G+ P KNRR + L
Sbjct: 463 TGFGETKPIADNKTAAGRKKNRRVDMKL 490
>gi|66044564|ref|YP_234405.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
gi|63255271|gb|AAY36367.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
Length = 260
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 2/140 (1%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW- 75
+ + ++ D +I++ LN + + GD V FD + ++P + L ++
Sbjct: 110 AKARLEARDAQIAALKNSLNAKQTERGTLVTFGD-VLFDYNKAELKPTAQGDIGKLAAFL 168
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
E D ++EG+ D GS + + +L RRA +V V G+ +R+ YGKE P
Sbjct: 169 QENPDRKVIVEGYTDSTGSASYNQSLSERRANSVRMALVRMGVDPARVVTMGYGKEYPVA 228
Query: 136 YGHDEDAYAKNRRAIVFLKG 155
A NRR V +
Sbjct: 229 DNTSNSGRAMNRRVEVTISN 248
>gi|238020688|ref|ZP_04601114.1| hypothetical protein GCWU000324_00578 [Kingella oralis ATCC 51147]
gi|237867668|gb|EEP68674.1| hypothetical protein GCWU000324_00578 [Kingella oralis ATCC 51147]
Length = 224
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHA 89
+ + +Q ++ +V F T+S ++ LS L + D I GH
Sbjct: 89 QGSGVAVDRQGDQIKLTMPAAVTFATNSATLSAQAQNSLSQAAQTLATYTDTTITIVGHT 148
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G+ + L RA +V NY G++A+RM V+ G P E A+NRR
Sbjct: 149 DNTGNDAINNPLSYNRAQSVANYLNQHGVAANRMSVSGQGSRQPVADNSTEAGRAQNRRV 208
Query: 150 IVFL 153
+ +
Sbjct: 209 EILI 212
>gi|224369820|ref|YP_002603984.1| OmpA2 [Desulfobacterium autotrophicum HRM2]
gi|223692537|gb|ACN15820.1| OmpA2 [Desulfobacterium autotrophicum HRM2]
Length = 503
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADE 91
+ + + FD + I+P L N+ L+K+ ++GH D
Sbjct: 380 PGTPLGANVNDLGCWILAELLFDYNKADIKPTSFDELDNVAMILKKNPALKIDLQGHTDN 439
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+GS+N ++ L L+R+ AV Y V++G+ + R+K +G P ++ AKNRR +
Sbjct: 440 IGSKNFNMKLSLKRSAAVKTYLVSKGVPSERLKTEGFGFSRPVDTNKTKEGRAKNRRVEL 499
>gi|217415925|dbj|BAH03186.1| putative OmpA-family membrane protein [Edwardsiella tarda]
Length = 576
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 42/130 (32%), Gaps = 2/130 (1%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFL 84
+ P + FD+ ++ + L N L K +
Sbjct: 419 ESEAQPTPKRVSKPKPVPKIVRLDSMSLFDSGKSVLKTGSTKWLVNSLVGIKAKPGWLIV 478
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAY 143
+ GH D GS + L L+RA AV ++ G V YG P +
Sbjct: 479 VSGHTDNTGSPQLNQMLSLKRAEAVRDWMRDTGDVPESCFAVQGYGASRPVATNDTPEGR 538
Query: 144 AKNRRAIVFL 153
A NRR + L
Sbjct: 539 ALNRRVEISL 548
>gi|146307821|ref|YP_001188286.1| flagellar motor protein MotD [Pseudomonas mendocina ymp]
gi|145576022|gb|ABP85554.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp]
Length = 269
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 42/128 (32%), Gaps = 4/128 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
L + + S+ F + ++ + L + +EG D
Sbjct: 108 QSDQLTVRGNEMWIEIELSSSLLFPSGDALPNNQAFDIIEKVAKILAPYQNPVKVEGFTD 167
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
L ++ L RA ++ G+ SR+ YG+ P + A+N
Sbjct: 168 NLPIQTSQFPTNWELSSARAASIVRMLAMDGVDPSRLAAVGYGEFQPIADNATAEGRARN 227
Query: 147 RRAIVFLK 154
RR ++ +
Sbjct: 228 RRVVLVIS 235
>gi|225181601|ref|ZP_03735042.1| OmpA/MotB domain protein [Dethiobacter alkaliphilus AHT 1]
gi|225167709|gb|EEG76519.1| OmpA/MotB domain protein [Dethiobacter alkaliphilus AHT 1]
Length = 227
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 47/133 (35%), Gaps = 5/133 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ +++ + D + FDT IRP ++L + L ++E
Sbjct: 82 QEEGLANIIDVRIEDRGVVLEIQDRLLFDTGRAEIRPEARELLVKVAGILANVPNQIIVE 141
Query: 87 GHADELGS----RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDED 141
GH D + S+ L + RA V Y R R T YG+ P
Sbjct: 142 GHTDNVPIQTAQYPSNWELSVDRAVRVVRYLSERQDIDPERFLATGYGEFQPVASNETVQ 201
Query: 142 AYAKNRRAIVFLK 154
AKNRR + +
Sbjct: 202 GRAKNRRVNIVIS 214
>gi|21674175|ref|NP_662240.1| OmpA family protein [Chlorobium tepidum TLS]
gi|21647337|gb|AAM72582.1| OmpA family protein [Chlorobium tepidum TLS]
Length = 231
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 47/133 (35%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
D +I + E + F T S ++ + L +D
Sbjct: 82 DKQADEIRQEVQGAKVERVGEGIRVVFDTGLLFSTDSATLNANSRYNIEKLARILNRYND 141
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ +IEGH D G+ S+ L RRA +V G+S R+ YG+ P E
Sbjct: 142 TNVVIEGHTDNTGTEASNQILSERRAESVATLLRTYGVSGRRLTAIGYGETRPVATNETE 201
Query: 141 DAYAKNRRAIVFL 153
NRR V +
Sbjct: 202 AGRRLNRRVEVLI 214
>gi|85713385|ref|ZP_01044392.1| Peptidoglycan-associated lipoprotein [Idiomarina baltica OS145]
gi|85692791|gb|EAQ30782.1| Peptidoglycan-associated lipoprotein [Idiomarina baltica OS145]
Length = 180
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 27/179 (15%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG------- 49
MQ + + I + T+ + S D+ + S + Q VG
Sbjct: 1 MQLNKLLKALAIAVPMATLAACSSTSTTDSGMGSGQETGQTTESGSQSGVQVGAADRAKT 60
Query: 50 ---------------DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELG 93
++F S++ ++L+ + ++ + +IEGHADE G
Sbjct: 61 PEEVREEQMEALRKEHIIYFAFDRSSVQSEYAELLAAHADYLVKNPNVTIVIEGHADERG 120
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ +IALG RRA AV +Y V G+ S++ SYG+E P V +E AYAKNRRA++
Sbjct: 121 TPEYNIALGERRAKAVEDYLVNLGVQDSQISTVSYGEEKPLVNASNERAYAKNRRAVLV 179
>gi|293395553|ref|ZP_06639836.1| OmpA family protein [Serratia odorifera DSM 4582]
gi|291421872|gb|EFE95118.1| OmpA family protein [Serratia odorifera DSM 4582]
Length = 406
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 53/134 (39%), Gaps = 4/134 (2%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
+ ++ +Q + FD+++ ++RPA I V+ + + L+ G++D
Sbjct: 260 AEGLVVVRDEAQQSVVILKGDGLFDSAATTVRPAYIPVIDRIAKAMNGVSGKILVTGYSD 319
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
L S+ L L RA AV + + R+K G P ++ A N
Sbjct: 320 NLPIRSARFPSNWELSLARAEAVSERLQKQLDNPQRVKAEGRGDSNPVAPNDSKENRALN 379
Query: 147 RRAIVFLKGCRANT 160
RR + L NT
Sbjct: 380 RRVEITLLVAPENT 393
>gi|110636642|ref|YP_676849.1| outer membrane porin F [Cytophaga hutchinsonii ATCC 33406]
gi|110279323|gb|ABG57509.1| outer membrane protein, porin F precursor [Cytophaga hutchinsonii
ATCC 33406]
Length = 669
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIA 100
E V ++VFFD + Y ++ L L + L+ ++ I G+ D +G+++ +
Sbjct: 553 ETGQVVVLNNVFFDFNKYELKSESYPELDRLVTLLKNNNAMKIEISGYTDSIGTKSYNDK 612
Query: 101 LGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
L RRA AV Y + + I SR+ V ++G+E P NRR +
Sbjct: 613 LSGRRAQAVATYLITKSAIDKSRITVKAFGEENPVTSNKTAKGRELNRRVEFKITNK 669
>gi|83312309|ref|YP_422573.1| Outer membrane protein and related peptidoglycan-associated lipo
protein [Magnetospirillum magneticum AMB-1]
gi|82947150|dbj|BAE52014.1| Outer membrane protein and related peptidoglycan-associated lipo
protein [Magnetospirillum magneticum AMB-1]
Length = 161
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 51/160 (31%), Positives = 83/160 (51%), Gaps = 7/160 (4%)
Query: 1 MQYSTIFIILSAITMMSISGIDN------LDTKISSPDTVLNESSLQEQFSSSVGDSVFF 54
M+ + I+ +A + + + + + + +E F ++VGD VFF
Sbjct: 1 MKLRFLTIVAAAALLAACESAPSDTGNTGGTGQTTPAVSSGIVKGSKEDFVANVGDRVFF 60
Query: 55 DTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYF 113
D S+R L +WL+ + +EGHADE G+R ++ALG +RA AV +Y
Sbjct: 61 DFDKSSLRADAKATLDKQAAWLKAYPNYSLTVEGHADERGTREYNLALGEKRANAVASYL 120
Query: 114 VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ GI+A+R+K SYGKE P G +E A+++NRR + L
Sbjct: 121 KSAGIAAARVKTVSYGKERPVALGSNEAAWSQNRRGVTVL 160
>gi|146296538|ref|YP_001180309.1| OmpA/MotB domain-containing protein [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145410114|gb|ABP67118.1| OmpA/MotB domain protein [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 257
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 43/121 (35%), Gaps = 7/121 (5%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR-- 95
+ S + D V F++ S + P +V+ + + + + IEGH D +
Sbjct: 126 QEERGLSILLKD-VLFNSGSAQLTPQAKEVVHEIAKILEKVPNNNIRIEGHTDNVPIHNK 184
Query: 96 --NSSIALGLRRAYAV-FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
S+ L RA V + R V YG+ P A NRR +
Sbjct: 185 YFYSNWELSTARATTVLQEILRVSKVKPERFSVVGYGEYRPIASNKTPQGRALNRRVTIV 244
Query: 153 L 153
+
Sbjct: 245 I 245
>gi|298735871|ref|YP_003728396.1| peptidoglycan-associated lipoprotein [Helicobacter pylori B8]
gi|298355060|emb|CBI65932.1| peptidoglycan-associated lipoprotein [Helicobacter pylori B8]
Length = 179
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/177 (21%), Positives = 75/177 (42%), Gaps = 24/177 (13%)
Query: 1 MQYSTIFIILSAITMMSISG-------------IDNLDTKISSPDTVLNESSLQEQFSSS 47
M+ S++F L A +++ + T + + + +++ +
Sbjct: 1 MKRSSVFSFLVAFLLVAGCSHKMDNKTVAGDVSTKTVQTAPVTTEPAPEKEEPKQEPAPV 60
Query: 48 VGDS-----------VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRN 96
V + ++FD Y I+ +D + L + +++ L+EG+ DE GS
Sbjct: 61 VEEKPAIESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEFGSSE 120
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ ALG++R +V N V +G+ +K S+G+ P + Y +NRR V L
Sbjct: 121 YNQALGVKRTLSVKNALVIKGVEKDMIKTISFGETKPKCAQKTRECYKENRRVDVKL 177
>gi|296117356|ref|ZP_06835946.1| peptidoglycan-associated lipoprotein [Gluconacetobacter hansenii
ATCC 23769]
gi|295976122|gb|EFG82910.1| peptidoglycan-associated lipoprotein [Gluconacetobacter hansenii
ATCC 23769]
Length = 157
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/150 (26%), Positives = 74/150 (49%), Gaps = 3/150 (2%)
Query: 1 MQYSTIFIILSAITMMSIS--GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSS 58
M+ + A+ + + S ++T ++ + ++ GD VFF+ +
Sbjct: 1 MRLKLLGAAGMALFLAACSDHTNKAVNTGAATQQQTGPVPGSEADLVANAGDRVFFELNQ 60
Query: 59 YSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG 117
S+ L +W + + I G+ D+ G+ ++ALG RRA A +Y VA+G
Sbjct: 61 NSLSADAKATLDRQAAWLAKYPQVNIQIAGNCDDRGTEEYNLALGQRRANAAHDYLVAKG 120
Query: 118 ISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
++ASR+ SYGK+ P+ G DE ++++NR
Sbjct: 121 VAASRITTISYGKDRPTAPGDDEASWSQNR 150
>gi|120555732|ref|YP_960083.1| OmpA/MotB domain-containing protein [Marinobacter aquaeolei VT8]
gi|120325581|gb|ABM19896.1| OmpA/MotB domain protein [Marinobacter aquaeolei VT8]
Length = 236
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADELGSRNSSIA 100
+Q + ++ FDT +IR L ++ L++ D + IEGH D GS + +
Sbjct: 120 DQIDLIMPGNITFDTDQSTIRSGFTGTLESVALVLKEFDKTIIQIEGHTDSTGSDSYNQL 179
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RRA +V ++ + +GI R + T YG+ P +NRR + L
Sbjct: 180 LSERRASSVRDFLLNQGIEPRRTRATGYGERYPIASNDTAAGREQNRRVELTL 232
>gi|296113590|ref|YP_003627528.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis RH4]
gi|295921284|gb|ADG61635.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis RH4]
Length = 171
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/157 (25%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 4 STIFIILSAITMMSISGIDNLDTKISS--------PDTVLNESSLQEQFSSSVGDSVFFD 55
++ ++ S S + + +++ + +S++ V+FD
Sbjct: 13 LSVLTFMTGCANKSTSQVMVAPNAPTGYTGVIYTGVAPLVDNDETIKTLASTLPSLVYFD 72
Query: 56 TSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
S I+P +L + L+ GH DE GSR +++LG RRA AV NY +
Sbjct: 73 FDSDEIKPQAAAILDEQAQFLTTNQTARVLVAGHTDERGSREYNMSLGERRAVAVRNYLL 132
Query: 115 ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+GI+ + +++ S+G+E P +G +E+A+++NRRA +
Sbjct: 133 GKGINQASVEIISFGEERPIAFGTNEEAWSQNRRAEL 169
>gi|86608243|ref|YP_477005.1| OmpA family protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86556785|gb|ABD01742.1| OmpA family protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 357
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 58/146 (39%), Gaps = 9/146 (6%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDS-------VFFDTSSYSIRPADIQVLSNLG 73
+D +D K L ES + + ++ + F S I A L+ +
Sbjct: 210 VDVVDVKPRQQRLELVESITSGEINQAISRDGRIALYGILFAYDSDQIEAAAEPTLAEIA 269
Query: 74 S-WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
E+ D L+ GH D GS + ++ L RRA AV N V GI R+ G
Sbjct: 270 KLMRERTDLSILVVGHTDATGSFDYNLGLSRRRAEAVVNRLVQLGIEQRRLYPVGVGFSA 329
Query: 133 PSVYGHDEDAYAKNRRAIVF-LKGCR 157
P E+ AKNRR + L G R
Sbjct: 330 PVASNTTEEGRAKNRRVELVDLAGGR 355
>gi|5081411|gb|AAD39366.1|AF117971_1 outer membrane protein OprF [Pseudomonas stutzeri LMG 11199T]
Length = 328
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 48/118 (40%), Gaps = 2/118 (1%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELG 93
++ V V FD +R + NL +++++ ++EGH D +G
Sbjct: 205 VDTEPEPAPEVVRVELDVKFDFDKSRVREESYSDIKNLADFMQQYPQTTTVVEGHTDSVG 264
Query: 94 SRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
+ + L RRA AV N V G+ +R+ YG+ P E+ NRR
Sbjct: 265 TDQYNQRLSERRAEAVRNVLVNEYGVQGNRVNSVGYGESRPVADNSTEEGRQINRRVE 322
>gi|332799185|ref|YP_004460684.1| OmpA/MotB domain-containing protein [Tepidanaerobacter sp. Re1]
gi|332696920|gb|AEE91377.1| OmpA/MotB domain protein [Tepidanaerobacter sp. Re1]
Length = 226
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 41/118 (34%), Gaps = 5/118 (4%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR----N 96
+ + V FD+ IR ++L L L + IEGH D L
Sbjct: 98 ERGLVVRFVEGVLFDSGKADIRNDAKEILDKLAPLLIESHRQIRIEGHTDNLPIHTSEFP 157
Query: 97 SSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA V Y + R S + Y + P E A NRR + +
Sbjct: 158 SNWELSTARAVNVVKYMIERHNLSPYIISAAGYSEYRPIAPNDSEKNRALNRRVDIII 215
>gi|149190763|ref|ZP_01869029.1| outer membrane protein OmpA [Vibrio shilonii AK1]
gi|148835419|gb|EDL52390.1| outer membrane protein OmpA [Vibrio shilonii AK1]
Length = 338
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 51/129 (39%), Gaps = 1/129 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFL 84
+ S+ + + E+ + + V F+ +S + + + D
Sbjct: 195 QEASAEEPHVAEAVVMTKTFEQVSGQENFEFNSTKLNENTKSDYDPLIALMQDHPDSTVT 254
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
I G+ D G + + RA ++ Y ++GI SRM V+ G+ P ++ A
Sbjct: 255 ITGYTDSSGPEEVNQRISEERAESIAAYLESQGIDRSRMTVSGMGEANPIADNSTKEGRA 314
Query: 145 KNRRAIVFL 153
+NRR + +
Sbjct: 315 QNRRVEITV 323
>gi|313205587|ref|YP_004044764.1| ompa/motb domain protein [Riemerella anatipestifer DSM 15868]
gi|312444903|gb|ADQ81258.1| OmpA/MotB domain protein [Riemerella anatipestifer DSM 15868]
gi|315022683|gb|EFT35708.1| OmpA/MotB domain protein [Riemerella anatipestifer RA-YM]
gi|325334983|gb|ADZ11257.1| Outer membrane protein related peptidoglycan-associated
(lipo)protein [Riemerella anatipestifer RA-GD]
Length = 230
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 2/148 (1%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG-DSVFFDTSSYSIRPADI 66
II + S +D +I + E ++ ++V F S ++
Sbjct: 69 IIGGVAGNVIGSKMDKQAKEIKEALPGAEVERVNEGIKITLNENTVNFGFDSANLTSVAK 128
Query: 67 QVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
L L L+ + + + GH D G+ + ++ L RRA AV +Y + GI++SRM
Sbjct: 129 TNLDKLAQVLKNNPDTNINVYGHTDSRGADDYNLRLSERRANAVVSYLSSLGIASSRMIA 188
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G+ P ++ AKNRR +
Sbjct: 189 KGVGEAEPIASNDTDEGRAKNRRVEFAI 216
>gi|313674297|ref|YP_004052293.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
gi|312940995|gb|ADR20185.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
Length = 665
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 56/129 (43%), Gaps = 1/129 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFL 84
++ + + ++ + + F+ +S IR + +L + + ++++
Sbjct: 534 AGVADNNGCPEITEETKEVLKEALEGIEFELASDVIRAQSLPILDKVVTVMQENPDYKLK 593
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
I GH D G ++++ L +RA A Y + +GI+ R+ YG+ P + A
Sbjct: 594 ISGHTDNQGDDDANLLLSHKRAQATKKYLMDQGIAILRLDAVGYGEMQPIESNDTAEGRA 653
Query: 145 KNRRAIVFL 153
KNRR +
Sbjct: 654 KNRRVEFEI 662
>gi|308271281|emb|CBX27889.1| hypothetical protein N47_G32130 [uncultured Desulfobacterium sp.]
Length = 403
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/121 (25%), Positives = 53/121 (43%), Gaps = 1/121 (0%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADE 91
+ + + V V+FDT ++I VL N+ ++K+ I+GH D
Sbjct: 280 PDTPKGASVDSRGCWVLAGVYFDTEKWNIVSQYFPVLDNVVGIIKKNPDMKLEIQGHTDS 339
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
G+ + L RA +V Y +G+ S++ YG +P+ E+ AKNRR +
Sbjct: 340 RGTEKYNQKLSENRAKSVLEYLAGKGVVRSKLTAKGYGYSVPAAPNDTEEGMAKNRRVEL 399
Query: 152 F 152
Sbjct: 400 K 400
>gi|283853608|ref|ZP_06370844.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B]
gi|283570999|gb|EFC19023.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B]
Length = 345
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 69/152 (45%), Gaps = 6/152 (3%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLN---ESSLQEQFSSSVG--DSVFFDTSSYSIRP 63
+L AI M L ++ + E +L E + S++FD Y+I+P
Sbjct: 192 VLKAIAAMGKCNCYELGEELLRNEAAREKFLECALYEWIEDEIVVFRSIYFDFDKYNIKP 251
Query: 64 ADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASR 122
+ VL K ++EGH D +GS ++ LG RRA +V +FV +GI ASR
Sbjct: 252 EFVPVLEEGTAIIKSKTGMKVVLEGHTDSVGSDQYNMKLGQRRADSVKAFFVKKGIDASR 311
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
++ S+G+ P A NRR ++ K
Sbjct: 312 IETISFGESDPVATNKTAQGRALNRRCVIKFK 343
>gi|262280028|ref|ZP_06057813.1| OmpA/MotB domain-containing protein [Acinetobacter calcoaceticus
RUH2202]
gi|262260379|gb|EEY79112.1| OmpA/MotB domain-containing protein [Acinetobacter calcoaceticus
RUH2202]
Length = 217
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 60/146 (41%), Gaps = 1/146 (0%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
+L A + + + + + V + + S+ FDT+ +I+P
Sbjct: 68 VLGAAGGVYLDQKEKKLRQQMAGTGVDVGRNPDGSVQLIMPGSITFDTNKSNIKPNFYST 127
Query: 69 LSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
L + L + + L+ G+ D G+ + +I L RA +V NY +G+S+SR+
Sbjct: 128 LDKVAQTLAEDNKSAILVTGYTDNTGNDSINIPLSQSRAQSVKNYLAGKGLSSSRIDAQG 187
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFL 153
YG P +NRR + +
Sbjct: 188 YGSSNPIADNSTASGREQNRRVEISI 213
>gi|28869499|ref|NP_792118.1| outer membrane porin OprF [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213968086|ref|ZP_03396231.1| outer membrane porin OprF [Pseudomonas syringae pv. tomato T1]
gi|301384938|ref|ZP_07233356.1| outer membrane porin OprF [Pseudomonas syringae pv. tomato Max13]
gi|302061987|ref|ZP_07253528.1| outer membrane porin OprF [Pseudomonas syringae pv. tomato K40]
gi|28852741|gb|AAO55813.1| outer membrane porin OprF [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213927066|gb|EEB60616.1| outer membrane porin OprF [Pseudomonas syringae pv. tomato T1]
gi|330875557|gb|EGH09706.1| outer membrane porin OprF [Pseudomonas syringae pv. morsprunorum
str. M302280PT]
gi|330967341|gb|EGH67601.1| outer membrane porin OprF [Pseudomonas syringae pv. actinidiae str.
M302091]
gi|331016208|gb|EGH96264.1| outer membrane porin OprF [Pseudomonas syringae pv. lachrymans str.
M302278PT]
Length = 344
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 58/138 (42%), Gaps = 4/138 (2%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD + ++P + + NL ++++
Sbjct: 203 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFNKSVVKPNSMGDIKNLADFMQQ 262
Query: 79 H-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVY 136
+ +EGH D +G + L RRA AV V + ASR+ YG+ P
Sbjct: 263 YPQTTTTVEGHTDSVGPDAYNQKLSERRANAVKQVLVNQYGVGASRVNSVGYGESRPVAD 322
Query: 137 GHDEDAYAKNRRAIVFLK 154
+ A NRR ++
Sbjct: 323 NATDAGRAVNRRVEAEVE 340
>gi|323698024|ref|ZP_08109936.1| peptidoglycan-associated lipoprotein [Desulfovibrio sp. ND132]
gi|323457956|gb|EGB13821.1| peptidoglycan-associated lipoprotein [Desulfovibrio desulfuricans
ND132]
Length = 184
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 44/176 (25%), Positives = 73/176 (41%), Gaps = 28/176 (15%)
Query: 7 FIILSAITMMSISGIDNLDTKISSPDTVLNESSL-------------------------- 40
+ L A++++ +G T + +
Sbjct: 9 IVALMAVSLLLFAGCAKKSTTTEPTQSQVEVKDDTQWTPPQPAEPAVDEAALAAEQQARA 68
Query: 41 -QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSS 98
E ++ F +SY + +L+ + + D + +IEGH DE G+ +
Sbjct: 69 KAEAVQELTNVTIHFAFNSYELSDESRSILAQKATILRKFADVNVVIEGHCDERGTEEYN 128
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ALG RRA A + + V G+ RMK+ SYG+E P GH+E A+AKNRR +K
Sbjct: 129 LALGERRARAAYEHLVILGVEPERMKIVSYGEEYPVDPGHNETAWAKNRRDEFVIK 184
>gi|224823894|ref|ZP_03697003.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002]
gi|224604349|gb|EEG10523.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002]
Length = 221
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 51/135 (37%), Gaps = 1/135 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
+ + V + Q + V FD+ Y I+ +L + +
Sbjct: 82 EQKAAMEQATKGTGVSVSQTADNQLKLDIPSDVSFDSGRYDIKSNMRPILDRFATTLNQN 141
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
I GH D GS + L + RA A +Y VARG++ +R+ + G P
Sbjct: 142 PVTTVKIIGHTDSTGSDAINGPLSVNRASATRSYLVARGVAMNRISIDGRGSSEPIASNG 201
Query: 139 DEDAYAKNRRAIVFL 153
AKNRR +F+
Sbjct: 202 TAAGRAKNRRVEIFV 216
>gi|152972417|ref|YP_001337563.1| putative outer membrane lipoprotein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|206578997|ref|YP_002236080.1| OmpA family protein [Klebsiella pneumoniae 342]
gi|238897010|ref|YP_002921755.1| putative outer membrane lipoprotein [Klebsiella pneumoniae
NTUH-K2044]
gi|262040618|ref|ZP_06013856.1| OmpA family protein [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|288933077|ref|YP_003437136.1| OmpA/MotB domain protein [Klebsiella variicola At-22]
gi|290511871|ref|ZP_06551239.1| outer membrane lipoprotein [Klebsiella sp. 1_1_55]
gi|329999890|ref|ZP_08303557.1| OmpA family protein [Klebsiella sp. MS 92-3]
gi|150957266|gb|ABR79296.1| putative outer membrane protein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|206568055|gb|ACI09831.1| OmpA family protein [Klebsiella pneumoniae 342]
gi|238549337|dbj|BAH65688.1| putative outer membrane protein [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|259041982|gb|EEW43015.1| OmpA family protein [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|288887806|gb|ADC56124.1| OmpA/MotB domain protein [Klebsiella variicola At-22]
gi|289775661|gb|EFD83661.1| outer membrane lipoprotein [Klebsiella sp. 1_1_55]
gi|328538172|gb|EGF64327.1| OmpA family protein [Klebsiella sp. MS 92-3]
Length = 220
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 68/135 (50%), Gaps = 1/135 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
+ + T ++ + + ++ ++V FD++S +++PA L+ + L++++
Sbjct: 83 VQEAKLRDKMQGTGVSVTRNGDNIVLNMPNNVTFDSNSANLKPAGANTLTGVAMVLKEYE 142
Query: 81 CD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ G+ D GS++ ++ L +RA +V + + +G++A+R++ T G P
Sbjct: 143 KTAVNVVGYTDSTGSKDLNMRLSQQRADSVASALITQGVAANRIRTTGMGPANPIASNST 202
Query: 140 EDAYAKNRRAIVFLK 154
+ A+NRR + L
Sbjct: 203 AEGKAQNRRVEITLS 217
>gi|146328667|ref|YP_001209012.1| OmpA family protein [Dichelobacter nodosus VCS1703A]
gi|146232137|gb|ABQ13115.1| OmpA family protein [Dichelobacter nodosus VCS1703A]
Length = 225
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 53/120 (44%), Gaps = 1/120 (0%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADELGSRNSSI 99
Q ++ V F T Y IRP Q L+++ + ++ + I GH D G +
Sbjct: 96 QGTLQLNIPGDVLFATDEYQIRPNFYQTLNSVAQTMNQYPQTIVHIYGHTDSTGRAAYNQ 155
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
L RRA + Y + +G++ R+ YG+ P D A+NRR V++K N
Sbjct: 156 GLSERRANSAAQYLMQQGVNMQRILSKGYGQNYPRANNATPDGRAQNRRVEVYIKAIDQN 215
>gi|114706797|ref|ZP_01439697.1| outer membrane lipoprotein [Fulvimarina pelagi HTCC2506]
gi|114537745|gb|EAU40869.1| outer membrane lipoprotein [Fulvimarina pelagi HTCC2506]
Length = 176
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 15/164 (9%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTVL--------------NESSLQEQFSSSVGDSVF 53
+ + A+ + ++G N + L ++F+ SVGD +F
Sbjct: 11 LAILALAGLMVAGCANRQDALPDNAAGLGLSGAGMNGVGGAGGPPGSSQEFTVSVGDRIF 70
Query: 54 FDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F+T S +I Q L W + +EGH+DE G+R ++ALG RRA A +Y
Sbjct: 71 FETDSSAITADAQQTLQRQAQWLNQYPQYQITVEGHSDERGTREYNLALGARRAAATRDY 130
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
G++A RM+ SYGKE P + +++NRRA+ L G
Sbjct: 131 LAQLGVNAGRMRTISYGKERPVAVCDNISCWSQNRRAVTVLSGA 174
>gi|163801667|ref|ZP_02195565.1| Conserved hypothetical outer membrane protein [Vibrio sp. AND4]
gi|159174584|gb|EDP59386.1| Conserved hypothetical outer membrane protein [Vibrio sp. AND4]
Length = 216
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 49/114 (42%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLR 104
+ + F S+ P + L L S L K D ++GH D GS + LGLR
Sbjct: 98 GEGLVARLHFGFDHSSLTPMGKKALKQLASSLNKRDSAITVDGHTDNKGSDGYNQDLGLR 157
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
RA A N G+ + + V S+G+ P + A+NRR +++ A
Sbjct: 158 RALAASNGLTNAGVDNNNIVVRSFGESEPMASNATPEGRAQNRRVEIWVADKDA 211
>gi|56415540|ref|YP_152615.1| outer membrane lipoprotein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|56129797|gb|AAV79303.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
Length = 216
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD+SS +++PA L+ + L+++ + G+ D
Sbjct: 90 GTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVVGYTD 149
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + ++ L +RA +V + + +G+ ASR++ + G P + A+NRR
Sbjct: 150 STGSHDLNMRLSQQRADSVASSLITQGVDASRIRTSGMGPANPIASNSTAEGKAQNRRVE 209
Query: 151 VFLK 154
+ L
Sbjct: 210 ITLS 213
>gi|50083922|ref|YP_045432.1| putative Outer membrane protein precursor (OmpA-like)
[Acinetobacter sp. ADP1]
gi|49529898|emb|CAG67610.1| putative Outer membrane protein precursor (OmpA-like)
[Acinetobacter sp. ADP1]
Length = 355
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 3/144 (2%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSS-SVGDSVFFDTSSYSIRPADIQVLSNLGSW-LE 77
++ P V+ QE ++ VFFDT+ +I+ ++ + +E
Sbjct: 201 AAPVVEVAPVEPAPVVQPQQPQELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLVE 260
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVY 136
+ I+GH D G R + L L RA +V + V I +R+ + + P
Sbjct: 261 YPNATARIDGHTDNTGPRKLNERLSLARANSVKSALVNEYNIDPARLATQGFAWDQPIAD 320
Query: 137 GHDEDAYAKNRRAIVFLKGCRANT 160
++ A NRR + G R T
Sbjct: 321 NSTKEGRAMNRRVFATITGSRTVT 344
>gi|331002828|ref|ZP_08326342.1| hypothetical protein HMPREF0491_01204 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330413317|gb|EGG92685.1| hypothetical protein HMPREF0491_01204 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 409
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 2/123 (1%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
+ ++ V FD Y +R + L+NL L++ + F I+GH D
Sbjct: 285 SVPAVPAIEANSIMITMDAGVLFDVDKYDLRNESKETLNNLAKVLKEANISAFEIDGHTD 344
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
+ L RA +V Y V+ G++A + YG+ P + +NRR
Sbjct: 345 SDADDAYNQTLSENRANSVKEYLVSVGVTA-NITTNGYGESRPVASNDTPEGKQQNRRVE 403
Query: 151 VFL 153
+ +
Sbjct: 404 III 406
>gi|313675126|ref|YP_004053122.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
gi|312941824|gb|ADR21014.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
Length = 699
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 51/134 (38%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ + + S L L + + ++ D F SS + ++ +
Sbjct: 557 NEETGEIEEDSKGVELKLQPLAKDANLTLKDIYFESNSSALFESSFEELDRVIKLMKSYP 616
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
I H D++GS + L RA +V +Y I+ R+ YG+ P V
Sbjct: 617 SMKIEIAAHTDDVGSAAYNTRLSQERANSVISYITGNSIAEGRLISKGYGESKPVVANDS 676
Query: 140 EDAYAKNRRAIVFL 153
E+ AKNRR + +
Sbjct: 677 EENRAKNRRVELKI 690
>gi|311695446|gb|ADP98319.1| OmpA/MotB domain protein [marine bacterium HP15]
Length = 218
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADELGSRNSSIA 100
++ + ++ FD + SI+P+ L ++ L+++D + IEGH D GS + +
Sbjct: 102 DEIELVMPGNITFDLNESSIKPSFSGTLESVALVLKEYDKTIIQIEGHTDSSGSDSYNQL 161
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RRA +V ++ + +GI R + YG+ P +NRR + L
Sbjct: 162 LSERRASSVRDFLLNQGIEPKRTRAVGYGERYPVASNDTAAGREQNRRVELTL 214
>gi|317153134|ref|YP_004121182.1| peptidoglycan-associated lipoprotein [Desulfovibrio aespoeensis
Aspo-2]
gi|316943385|gb|ADU62436.1| peptidoglycan-associated lipoprotein [Desulfovibrio aespoeensis
Aspo-2]
Length = 183
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/174 (23%), Positives = 73/174 (41%), Gaps = 27/174 (15%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTVLNESSLQ-------------------------- 41
+IL + + +G T + P + +
Sbjct: 10 LILLVLALGVGAGCAKKKTTTTPPGAQVEVTDESQWKSSSSDSSMDEATLASEAERRAKT 69
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIA 100
E + ++ F SY + +L+ + + ++ D ++EGH DE G+ ++A
Sbjct: 70 EAVTELTSVTINFAFDSYELNSEARSILALKANIMRRYTDVRVVVEGHCDERGTEEYNLA 129
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
LG RRA A + + V G+ RM + S+G+E P H+E A+AKNRRA ++
Sbjct: 130 LGERRARAAYEHLVILGVDPGRMSIVSFGEEKPLDSAHNETAWAKNRRAEFVVR 183
>gi|5081415|gb|AAD39370.1|AF117975_1 outer membrane protein OprF [Pseudomonas stutzeri ZoBell]
Length = 321
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 46/118 (38%), Gaps = 2/118 (1%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELG 93
++ V V FD +R + NL +++++ +EGH D +G
Sbjct: 203 VDNEPEPAPEVVRVELDVKFDFDKSRVREESYSDIKNLADFMQQYPQTTTTVEGHTDSVG 262
Query: 94 SRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
+ + L RRA AV N V + +R+ YG+ P E+ NRR
Sbjct: 263 TDQYNQRLSERRAEAVRNVLVNEHGVQGNRVNSVGYGESRPVADNSTEEGRQINRRVE 320
>gi|303248654|ref|ZP_07334908.1| peptidoglycan-associated lipoprotein [Desulfovibrio fructosovorans
JJ]
gi|302489910|gb|EFL49836.1| peptidoglycan-associated lipoprotein [Desulfovibrio fructosovorans
JJ]
Length = 171
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 46/167 (27%), Positives = 70/167 (41%), Gaps = 16/167 (9%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQE---------------QFS 45
M S I + + M+S++G D QE Q +
Sbjct: 1 MTRSRILTLAVLVLMLSLTGFGCAKKAGGPGDGSGTSWEDQEKARLEQERALREKMGQAA 60
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLR 104
+ + + F S ++ Q+L+ + ++ ++EG+ D+ G+ ++ALG R
Sbjct: 61 NELAQMIHFAFDSSNLTAESRQILTRKAEIMRQYPQIKVIVEGNCDQRGTAEYNLALGER 120
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA A Y GI A R+ SYGKE P GH E AYAKNRR
Sbjct: 121 RAQAAAQYLSNLGIPADRLSTVSYGKERPLDPGHSEAAYAKNRRDEF 167
>gi|209517619|ref|ZP_03266457.1| peptidoglycan-associated lipoprotein [Burkholderia sp. H160]
gi|209501915|gb|EEA01933.1| peptidoglycan-associated lipoprotein [Burkholderia sp. H160]
Length = 168
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 11/162 (6%)
Query: 2 QYSTIFIILSAITMMSI-SGIDNLDTKISSPDTV---------LNESSLQEQFSSSVGDS 51
+ F ++ + + SG+ + + +N L + S S
Sbjct: 4 KLRFAFAVVMVGALAACHSGVKLDENANKGAGSAQPNPNDVATVNVDPLNDPNSPLAKRS 63
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVF 110
++FD SYS++ +L +L+ H LI+G+ DE G+ ++ALG +RA AV
Sbjct: 64 IYFDFDSYSVKDDYQTLLQQHAQYLKSHPQRHVLIQGNTDERGTSEYNLALGQKRAEAVR 123
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
G++ S+M+ S GKE P GHDE ++A+NRRA +
Sbjct: 124 RSLALMGVTDSQMEAVSLGKEKPLATGHDEASWAQNRRADLV 165
>gi|310816576|ref|YP_003964540.1| OmpA/MotB family protein [Ketogulonicigenium vulgare Y25]
gi|308755311|gb|ADO43240.1| OmpA/MotB family protein [Ketogulonicigenium vulgare Y25]
Length = 185
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 25/178 (14%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKIS------------------------SPDTVLNE 37
++ +++SA+ + + S D T S ++
Sbjct: 3 KFLIAGLLVSAVALSACSRPDRSATGDSNSPYGAGGYTSPYGAGGYGQGVGAGGAGSASD 62
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRN 96
+ Q F+ ++GD + F S+ Q+L+ WL+ + +IEGHADE G+R
Sbjct: 63 PTSQAYFNQTIGDRILFAVDQSSVSSEASQILNGQAQWLQTNSQYGIVIEGHADEQGTRE 122
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
++ALG RRA AV Y ++RGISA+R++ SYGKE P E Y +NRRA+ +
Sbjct: 123 YNVALGARRANAVREYLISRGISANRIRTVSYGKERPIAVCSAESCYTQNRRAVTVIS 180
>gi|161525757|ref|YP_001580769.1| peptidoglycan-associated lipoprotein [Burkholderia multivorans ATCC
17616]
gi|160343186|gb|ABX16272.1| peptidoglycan-associated lipoprotein [Burkholderia multivorans ATCC
17616]
Length = 176
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 14/166 (8%)
Query: 1 MQYSTIFIILSAITMMSISGI-------DNLDTKISSPDTV------LNESSLQEQFSSS 47
M + + L+ + + +++ D + S +N L + S
Sbjct: 8 MMSKKVRLALAVMMIGALAACKSGVKLDDKANAGAMSTQPSADNVAQVNVDPLNDPNSPL 67
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRA 106
S++FD SYS++ +L +L+ H LI+G+ DE G+ ++ALG +RA
Sbjct: 68 AKRSIYFDFDSYSVKDEYQPLLQQHAQYLKSHPQRHVLIQGNTDERGTSEYNLALGQKRA 127
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
AV G++ S+M+ S GKE P GHDE ++A+NRRA +
Sbjct: 128 EAVRRALALLGVADSQMEAVSLGKEKPQATGHDEASWAQNRRADLV 173
>gi|290957838|ref|YP_003489020.1| hypothetical protein SCAB_33721 [Streptomyces scabiei 87.22]
gi|260647364|emb|CBG70469.1| putative secreted protein [Streptomyces scabiei 87.22]
Length = 206
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 54/145 (37%), Gaps = 1/145 (0%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQ 67
+ L+ ++ + + ++ + + E + ++ V F +S + P
Sbjct: 57 LKLAQGATLAPAKVLDIKSVVEDLGGEERREDTNENVTFALQAEVLFPKNSAKLNPQARS 116
Query: 68 VLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT 126
+ + ++K D + G D LGS + L +RA AV + +V
Sbjct: 117 RIQTIAEEIKKQDAVKVRVFGFTDNLGSYAHGLTLSKKRAEAVHDLLATDLDGNVTFEVR 176
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIV 151
Y ++ P E+ KNRR V
Sbjct: 177 GYSEDYPIADNATEEGRKKNRRVEV 201
>gi|189423111|ref|YP_001950288.1| OmpA/MotB domain protein [Geobacter lovleyi SZ]
gi|189419370|gb|ACD93768.1| OmpA/MotB domain protein [Geobacter lovleyi SZ]
Length = 271
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 5/119 (4%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----R 95
+ S+ ++ FFD+ S I+PA Q+L+ + + ++ +EGH D +
Sbjct: 143 TRRGLVVSLKEAGFFDSGSAVIKPAGYQLLNTILEAMTQYSNPLRVEGHTDNIPISTPLF 202
Query: 96 NSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L + RA V Y ++ T YG+ P+ + +KNRR + L
Sbjct: 203 PSNWELSVSRATNVLRYLQKNYDVEPGKLSATGYGEFRPTAENSTPEGRSKNRRVDIVL 261
>gi|108759341|ref|YP_630319.1| OmpA domain-containing protein [Myxococcus xanthus DK 1622]
gi|108463221|gb|ABF88406.1| OmpA domain protein [Myxococcus xanthus DK 1622]
Length = 639
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNS 97
+ E + +V F+T S I+ +L + + L K+ LIEGH D GSR
Sbjct: 487 VVESDRIRIKGNVLFETGSAVIQKQSYPLLDEVATVLRKNPTLGPVLIEGHTDNRGSRAL 546
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L RRA +V Y VA+GI+ R+ +G + P AKNRR L
Sbjct: 547 NMGLSDRRAKSVLEYLVAKGIARKRLSSKGFGFDNPIATNDTALGRAKNRRVDFRL 602
>gi|78189119|ref|YP_379457.1| OmpA family protein [Chlorobium chlorochromatii CaD3]
gi|78171318|gb|ABB28414.1| OmpA family protein [Chlorobium chlorochromatii CaD3]
Length = 233
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 51/138 (36%), Gaps = 1/138 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-D 80
D I + E + F T S +I A + L L + D
Sbjct: 84 DKQAAAIDQNVEGAQVQRVGESIRVVFDSGLLFTTGSSTISAASRSNIEQLARILNTYGD 143
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ +IEGH D +G+ ++ L +RA +V G++ +RM YG+ P E
Sbjct: 144 TNVVIEGHTDSIGNEATNQVLSEKRAESVATLLKVYGVAPNRMSAVGYGETRPVATNETE 203
Query: 141 DAYAKNRRAIVFLKGCRA 158
NRR V + A
Sbjct: 204 AGRNLNRRVEVLIYATDA 221
>gi|257485486|ref|ZP_05639527.1| ompA family protein [Pseudomonas syringae pv. tabaci ATCC 11528]
gi|331010666|gb|EGH90722.1| ompA family protein [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 271
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 57/144 (39%), Gaps = 2/144 (1%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
++ + L + ++GD V FD ++ + + + + +
Sbjct: 123 AKLASAQQQGRWLEDQILSLATTETDRGLVMTLGD-VLFDAGRAELKSSASRTILKVVQF 181
Query: 76 LEKHDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
L+ + + IEG+ D G R ++ L RA AV + + G+ R+ V YG++ P
Sbjct: 182 LQINPRRVVRIEGYTDSTGDRQENLKLSKDRAQAVADVLMDLGVDEKRIHVEGYGQQFPV 241
Query: 135 VYGHDEDAYAKNRRAIVFLKGCRA 158
E A+NRR + +
Sbjct: 242 NANASERGRAQNRRVEIVFSDEKG 265
>gi|120613283|ref|YP_972961.1| OmpA/MotB domain-containing protein [Acidovorax citrulli AAC00-1]
gi|120591747|gb|ABM35187.1| OmpA/MotB domain protein [Acidovorax citrulli AAC00-1]
Length = 217
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 54/129 (41%), Gaps = 1/129 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFL 84
+++ V+ + Q + + F T+ I+P VL + +
Sbjct: 82 QQVTQGTGVVVTQTQDNQLKLDIPSDISFATNRSDIQPNFAPVLDRFAEGLRNNPNAEVR 141
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
I G+ D G+ + L L RA + NY ARG++ +R++V G P + A
Sbjct: 142 IVGYTDSTGNDAINNPLSLDRATSTRNYLTARGVNGARVQVEGRGAREPVATNDTAEGRA 201
Query: 145 KNRRAIVFL 153
+NRR +++
Sbjct: 202 RNRRVEIYV 210
>gi|19703598|ref|NP_603160.1| Outer membrane protein [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|19713702|gb|AAL94459.1| Outer membrane protein [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
Length = 157
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+LN + +E S+ FD +++P +L+N+ ++E+++ + I GH D +
Sbjct: 17 DILNSEAPKEMTIVLDERSLNFDFDKSNVKPQYYDLLNNIKEFVEQNNYEITIVGHTDSI 76
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIV 151
GS + L RRA +V + G+S R+ + + G+E P ++ A+NRR
Sbjct: 77 GSNAYNFKLSRRRAESVKAKLLEFGLSEDRIVGIEAMGEEQPIATNATKEGRAQNRRVEF 136
Query: 152 FL 153
L
Sbjct: 137 KL 138
>gi|71276562|ref|ZP_00652836.1| OmpA/MotB:Rickettsia 17 kDa surface antigen [Xylella fastidiosa
Dixon]
gi|71900206|ref|ZP_00682345.1| OmpA/MotB [Xylella fastidiosa Ann-1]
gi|170730945|ref|YP_001776378.1| OmpA family protein [Xylella fastidiosa M12]
gi|182682310|ref|YP_001830470.1| OmpA/MotB domain-containing protein [Xylella fastidiosa M23]
gi|71162633|gb|EAO12361.1| OmpA/MotB:Rickettsia 17 kDa surface antigen [Xylella fastidiosa
Dixon]
gi|71730039|gb|EAO32131.1| OmpA/MotB [Xylella fastidiosa Ann-1]
gi|167965738|gb|ACA12748.1| OmpA family protein [Xylella fastidiosa M12]
gi|182632420|gb|ACB93196.1| OmpA/MotB domain protein [Xylella fastidiosa M23]
Length = 241
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 1/125 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGH 88
+ +T ++ + + ++ D + FD ++P L N+ S E + + G+
Sbjct: 103 TANTGIDVKRDGDNITLNLPDGITFDFGKSMLKPQFYGALKNVASTLREYNQTMIEVVGY 162
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D +GS + L RA AV +Y A+G+ RM+++ GK P E +KNRR
Sbjct: 163 TDSIGSDVVNQRLSEDRAGAVASYLAAQGVQRERMEISGMGKRYPIADNSTEAGRSKNRR 222
Query: 149 AIVFL 153
+ L
Sbjct: 223 VEIHL 227
>gi|126736820|ref|ZP_01752555.1| OmpA domain protein [Roseobacter sp. SK209-2-6]
gi|126721405|gb|EBA18108.1| OmpA domain protein [Roseobacter sp. SK209-2-6]
Length = 205
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHA 89
+ ++ + ++ S + + F T S +I P L ++ + + + GH
Sbjct: 77 ANDSISIVNTGDRLILSFPNDLTFATDSAAISPVVQADLRSVAGSLVRYPNSTVQVIGHT 136
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G + + L RRA AV + A G+ R+++ G+E P + A+NRR
Sbjct: 137 DSDGDASYNQGLSERRANAVADQIQAGGVPYHRLRIIGLGEEQPVASNLTPEGKARNRRV 196
Query: 150 IVFL 153
V +
Sbjct: 197 EVVI 200
>gi|332978756|gb|EGK15448.1| outer membrane porin OprF [Psychrobacter sp. 1501(2011)]
Length = 304
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLR 104
++ V FD ++P ++ LS +++K+ D +IEGH D S +IAL R
Sbjct: 192 VTINLQVLFDNDKSVVKPQYLRDLSTAAEFMQKYSDTTVVIEGHTDSNASDAYNIALSKR 251
Query: 105 RAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RA+AV FV + IS +R++ YG+ P + NRR + ++
Sbjct: 252 RAHAVKEVFVNQYGISPARIQAVGYGESRPIASNATAEGRQMNRRVVAVIQ 302
>gi|330959172|gb|EGH59432.1| ompA family protein [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 260
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 2/140 (1%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW- 75
+ + ++ D +I++ LN + + GD V FD + ++P + L ++
Sbjct: 110 AKARLEARDAQIAALKNSLNAKQTERGTLVTFGD-VLFDYNKADLKPTAQGDIGKLAAFL 168
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
E D ++EG+ D GS + + +L RRA +V V G+ +R+ YGKE P
Sbjct: 169 QENPDRKVIVEGYTDSTGSASYNQSLSERRANSVRMALVRMGVDPARVVTMGYGKEYPVA 228
Query: 136 YGHDEDAYAKNRRAIVFLKG 155
A NRR V +
Sbjct: 229 DNTSNSGRAMNRRVEVTISN 248
>gi|257470656|ref|ZP_05634746.1| Outer membrane protein [Fusobacterium ulcerans ATCC 49185]
Length = 217
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 62/123 (50%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+T + S + + ++ V F T S +I + L+++ + ++ + ++ G+ D
Sbjct: 90 NTEVQVSQNGDNLNLNLPGGVTFATDSSNIVSSFYGPLNSIATVLVQYPETRIIVNGYTD 149
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
+GS + +++L RRA +V NY + +G+SA R+ YG E P A+NRR
Sbjct: 150 NVGSASYNVSLSERRAASVRNYLIQQGVSARRISYVGYGMENPRATNSTAAGRAENRRVE 209
Query: 151 VFL 153
+ +
Sbjct: 210 LEI 212
>gi|254455867|ref|ZP_05069296.1| OmpA family protein [Candidatus Pelagibacter sp. HTCC7211]
gi|207082869|gb|EDZ60295.1| OmpA family protein [Candidatus Pelagibacter sp. HTCC7211]
Length = 165
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 44/133 (33%), Positives = 68/133 (51%), Gaps = 1/133 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKH 79
+ D + V + E + V D VFF T+ + A + L +W +
Sbjct: 30 TTSTDIQGQMQSDVYTGTDTVEYLADGVPDRVFFATNESILTTASRETLRAQAAWLRKNS 89
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ ++EGHADE G+R ++ALG RRA + +Y + GIS+ R+ V SYGKE P G
Sbjct: 90 SINIVLEGHADERGTREYNLALGERRANSAKDYLMTYGISSDRISVLSYGKERPVDGGSS 149
Query: 140 EDAYAKNRRAIVF 152
A++KNRR++
Sbjct: 150 PLAWSKNRRSVTV 162
>gi|146281895|ref|YP_001172048.1| outer membrane protein [Pseudomonas stutzeri A1501]
gi|145570100|gb|ABP79206.1| outer membrane protein [Pseudomonas stutzeri A1501]
Length = 212
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 48/131 (36%), Gaps = 2/131 (1%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI 85
+ P V V FD ++ + NL +++++ +
Sbjct: 79 VETVEPMPQTQPEPEPAAAPVRVELDVKFDFDRDVVKQDSYSDIQNLADFMKEYRQTTTV 138
Query: 86 -EGHADELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAY 143
EGH D +G+ + L RRA AV G+ +R+ YG+ P E+
Sbjct: 139 LEGHTDSVGTDAYNQRLSERRANAVRRVLVDELGVEGNRVNAVGYGESRPVADNSTEEGR 198
Query: 144 AKNRRAIVFLK 154
A NRR ++
Sbjct: 199 AINRRVEAEVE 209
>gi|312959355|ref|ZP_07773872.1| OmpA family protein [Pseudomonas fluorescens WH6]
gi|311286072|gb|EFQ64636.1| OmpA family protein [Pseudomonas fluorescens WH6]
Length = 261
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 2/135 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD- 80
D D +I LN + GD V F T+ ++ + ++ L +L +
Sbjct: 115 DARDAQIKQLQDSLNAKQTDRGTLVTFGD-VLFATNKSDLKSTGLVNITKLAQFLRDNPD 173
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++EG+ D GS + + +L RRA +V +G+ SR+ YGKE P
Sbjct: 174 RKVIVEGYTDSTGSDSYNQSLSERRAASVQRALAQQGVDISRIVTQGYGKEYPVADNGSV 233
Query: 141 DAYAKNRRAIVFLKG 155
A NRR V +
Sbjct: 234 SGRAMNRRVEVTISN 248
>gi|296273863|ref|YP_003656494.1| OmpA/MotB domain-containing protein [Arcobacter nitrofigilis DSM
7299]
gi|296098037|gb|ADG93987.1| OmpA/MotB domain protein [Arcobacter nitrofigilis DSM 7299]
Length = 180
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/175 (22%), Positives = 76/175 (43%), Gaps = 25/175 (14%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQ------------------- 41
M+ + ++A + + ++ + ++P +ESSL
Sbjct: 1 MKKYGLLAFMAATLLFTGCSQKTVEMENTTPTPTNSESSLNTVETTDNSGMTADNMTTDG 60
Query: 42 --EQFSSS----VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR 95
F + +S++F + + +V S+ S L+ IEG+ DE G+
Sbjct: 61 KGNYFVVNGKKVFVESIYFGFDKFKLTEDQRKVASDNASKLKGLSGSVKIEGNCDEWGTD 120
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
+ ALGL+RA V + V+ GI+++ + + S+G+ P ++ +AKNRRA
Sbjct: 121 EYNYALGLKRAKVVKDALVSDGIASNSISIVSFGESNPVCSEKTKECWAKNRRAE 175
>gi|237803483|ref|ZP_04591068.1| OmpA/MotB [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331025465|gb|EGI05521.1| OmpA/MotB [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 271
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 58/144 (40%), Gaps = 2/144 (1%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
++ + L + ++GD V FD ++ + + + + +
Sbjct: 123 AKLASAQQQGRWLEDQILSLATTQTDRGLVMTLGD-VLFDAGHAELKNSASRTILKVVQF 181
Query: 76 LEKHDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
L+ + + IEG+ D G R ++ L RA AV + + G+ R++V YG++ P
Sbjct: 182 LQINPRRVVRIEGYTDSTGDRQENLKLSKDRAQAVADVLIDLGVDEKRIQVEGYGQQFPV 241
Query: 135 VYGHDEDAYAKNRRAIVFLKGCRA 158
E A+NRR + +
Sbjct: 242 DANTSERGRAQNRRVEIVFSDEKG 265
>gi|124008000|ref|ZP_01692700.1| peptidoglycan associated periplasmic protein, putative [Microscilla
marina ATCC 23134]
gi|123986584|gb|EAY26383.1| peptidoglycan associated periplasmic protein, putative [Microscilla
marina ATCC 23134]
Length = 472
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 67/136 (49%), Gaps = 2/136 (1%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+ + K +S + ++ + L+ ++ D ++FD +S +++ + L+ + L+
Sbjct: 333 TQTIKVQPKGASKNVMVKLTKLKTGAKIALND-IYFDFNSAALKDSSFIELNRVVKMLQT 391
Query: 79 HD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+ IE H D +GS+ ++ L RRA +V +Y + I +R+ +G++ P V
Sbjct: 392 NPKVKLSIEAHTDNVGSKAKNLKLSNRRAKSVADYLKEKKIDQNRLVTKGFGEDRPLVPN 451
Query: 138 HDEDAYAKNRRAIVFL 153
+ AKNRR + +
Sbjct: 452 TSKKNKAKNRRVELRV 467
>gi|284924249|emb|CBG37350.1| putative type VI secretion protein [Escherichia coli 042]
Length = 576
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 50/134 (37%), Gaps = 2/134 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHD 80
+ P + + Q + + FD ++++P + L N L K
Sbjct: 417 ATGEWVAPRPPRPVIQKVTQTPKTVRLNSLALFDAGKWTLKPGATKWLVNALVDIKAKAG 476
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHD 139
++ GH D G + AL L+RA AV ++ G V YG+ P
Sbjct: 477 WLIVVSGHTDNTGDPLRNQALSLKRAEAVRDWMRDTGDIPQSCFAVQGYGESRPVAPNDT 536
Query: 140 EDAYAKNRRAIVFL 153
+ A+NRR + L
Sbjct: 537 AEGRARNRRVEISL 550
>gi|218696635|ref|YP_002404302.1| hypothetical protein EC55989_3336 [Escherichia coli 55989]
gi|218353367|emb|CAU99387.1| conserved hypothetical protein; putative membrane protein
[Escherichia coli 55989]
Length = 608
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 50/134 (37%), Gaps = 2/134 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHD 80
+ P + + Q + + FD ++++P + L N L K
Sbjct: 449 ATGEWVAPRPPRPVIQKVTQTPKTVRLNSLALFDAGKWTLKPGATKWLVNALVDIKAKAG 508
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHD 139
++ GH D G + AL L+RA AV ++ G V YG+ P
Sbjct: 509 WLIVVSGHTDNTGDPLRNQALSLKRAEAVRDWMRDTGDIPQSCFAVQGYGESRPVAPNDT 568
Query: 140 EDAYAKNRRAIVFL 153
+ A+NRR + L
Sbjct: 569 AEGRARNRRVEISL 582
>gi|126732859|ref|ZP_01748650.1| OmpA family protein [Sagittula stellata E-37]
gi|126706635|gb|EBA05709.1| OmpA family protein [Sagittula stellata E-37]
Length = 227
Score = 82.5 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 56/126 (44%), Gaps = 1/126 (0%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEG 87
+ ++ + ++ ++ + F T S ++ + + ++ + + I G
Sbjct: 97 QQLGSQVDIRNTGDRLIVTMPQDILFATDSATLSGGLLGDIQDVAQSVLRYPNTTTQIIG 156
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
H D G +++L RRA AV N F+A+ + +SR++V G++ P +NR
Sbjct: 157 HTDSDGDAAYNLSLSQRRAQAVANVFLAQNVPSSRIQVIGRGEDQPIASNLTPQGKQQNR 216
Query: 148 RAIVFL 153
R + +
Sbjct: 217 RVEIVI 222
>gi|312130013|ref|YP_003997353.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132]
gi|311906559|gb|ADQ17000.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132]
Length = 622
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIA 100
E+ + D++FFDT S +IRP L + + L+++ I GH D++G+ +++
Sbjct: 509 EKENKETLDNIFFDTGSAAIRPESEIELKKVVTLLKENPDLKVEISGHTDDVGNDKANMN 568
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L ++RA AV Y +GI R+ YG+ P V + NRR + +
Sbjct: 569 LSIQRANAVVEYLKGKGIHTQRLVAKGYGESQPKVKNDSDKNRQLNRRIELKV 621
>gi|296130397|ref|YP_003637647.1| OmpA/MotB domain protein [Cellulomonas flavigena DSM 20109]
gi|296022212|gb|ADG75448.1| OmpA/MotB domain protein [Cellulomonas flavigena DSM 20109]
Length = 355
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 46/132 (34%), Gaps = 3/132 (2%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEG 87
S + EQ + SV F S + P L+ + + + + ++ G
Sbjct: 224 SDLAGDVQVEESPEQVGIVLDASVLFAFDSAELAPEAQSRLAEVAADIAARGTGEVVVTG 283
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+ D G R+ + L +RA +V A G+ P ++ NR
Sbjct: 284 YTDSDGDRSYNQTLSEQRAQSVVAALQPAAGGAVTFSAVGEGESDPVASNDTDEGKQANR 343
Query: 148 RAIVF--LKGCR 157
R + ++G R
Sbjct: 344 RVTIVYSVEGDR 355
>gi|257454195|ref|ZP_05619465.1| outer membrane protein, OmpA/MotB family [Enhydrobacter aerosaccus
SK60]
gi|257448368|gb|EEV23341.1| outer membrane protein, OmpA/MotB family [Enhydrobacter aerosaccus
SK60]
Length = 172
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 51/170 (30%), Positives = 82/170 (48%), Gaps = 19/170 (11%)
Query: 1 MQYSTIFIILSA--ITMMSISGIDNLDTKISSP----------------DTVLNESSLQE 42
M+ + + ++ +A + ++++G T S V+ S+
Sbjct: 1 MKLTILKVVSAAAMMATIALTGCSAKRTGTSEVVVAPMGVPGGVGYYNGGAVVTNSTSVI 60
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIAL 101
+ + ++V+F S I VL+ +L+ + I GH DE GSR ++AL
Sbjct: 61 TAAGANPNTVYFGFDSSEIDAQGQAVLNQQAQFLQANPSARVAIAGHTDERGSREYNLAL 120
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
G RRA A Y G+SASRM+ SYG++ P+ GHDE A+AKNRRA +
Sbjct: 121 GERRAQAAQAYLATSGVSASRMEAISYGEDQPADPGHDESAWAKNRRAEI 170
>gi|162146629|ref|YP_001601088.1| outer membrane lipoprotein omp16 [Gluconacetobacter diazotrophicus
PAl 5]
gi|209543379|ref|YP_002275608.1| peptidoglycan-associated lipoprotein [Gluconacetobacter
diazotrophicus PAl 5]
gi|161785204|emb|CAP54750.1| Outer membrane lipoprotein omp16 [Gluconacetobacter diazotrophicus
PAl 5]
gi|209531056|gb|ACI50993.1| peptidoglycan-associated lipoprotein [Gluconacetobacter
diazotrophicus PAl 5]
Length = 158
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/151 (27%), Positives = 74/151 (49%), Gaps = 4/151 (2%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSP---DTVLNESSLQEQFSSSVGDSVFFDTS 57
M+ + + A+ + + SG + + + + ++VGD VFF+ +
Sbjct: 1 MRLKLLGALGMAVLLAACSGENEKGATTGTGAAAQSTGVTPGSEADLVANVGDRVFFELN 60
Query: 58 SYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
++ L +W + + G+ D+ G+ +IALG RRA A +Y VA+
Sbjct: 61 KNNLSSDAQATLDRQAAWLAKYPQVTIQVAGNCDDRGTEEYNIALGERRANAARDYLVAK 120
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
G++ASR+ SYGK+ P+ G DE ++A+NR
Sbjct: 121 GVAASRITTISYGKDRPTATGDDEQSWAQNR 151
>gi|5081412|gb|AAD39367.1|AF117972_1 outer membrane protein OprF [Pseudomonas stutzeri A15]
Length = 321
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 48/118 (40%), Gaps = 2/118 (1%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELG 93
++ V V FD +R + NL +++++ ++EGH D +G
Sbjct: 203 VDNEPEPAPEVVRVELDVKFDFDKSRVREESYSDIKNLADFMQQYPQTTTVVEGHTDSVG 262
Query: 94 SRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
+ + L RRA AV N V G+ +R+ YG+ P E+ NRR
Sbjct: 263 TDQYNQRLSERRAEAVRNVLVNEYGVQGNRVNSVGYGESRPVADNSTEEGRQINRRVE 320
>gi|34763480|ref|ZP_00144424.1| Outer membrane protein [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|27886853|gb|EAA23981.1| Outer membrane protein [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
Length = 157
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+LN + +E S+ FD +++P +L N+ ++E+++ + I GH D +
Sbjct: 17 DILNSEAPKEMTIVLDERSLNFDFDKSNVKPQYYDLLKNIKEFVEQNNYEITIVGHTDSI 76
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIV 151
GS + L RRA +V + G+S R+ + + G+E P ++ A+NRR
Sbjct: 77 GSNAYNFKLSRRRAESVKAKLLEFGLSEDRIVGIEAMGEEQPIATNATKEGRAQNRRVEF 136
Query: 152 FL 153
L
Sbjct: 137 KL 138
>gi|300114861|ref|YP_003761436.1| OmpA/MotB domain-containing protein [Nitrosococcus watsonii C-113]
gi|299540798|gb|ADJ29115.1| OmpA/MotB domain protein [Nitrosococcus watsonii C-113]
Length = 249
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADELGSRNSSI 99
E + V FD S +++PA + L + L+K++ + + GH D G+ ++
Sbjct: 114 DESLKLDIPSEVSFDHDSDALKPAFLPTLDKIADVLKKYNKTVVHVIGHTDSTGAEKYNL 173
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L LRRA V Y +GI + R+ + G+ P NRR + LK
Sbjct: 174 DLSLRRAGNVALYLERQGIPSQRLSIYGRGENEPRASNATASGRQLNRRVEIILK 228
>gi|208435023|ref|YP_002266689.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
G27]
gi|208432952|gb|ACI27823.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
G27]
Length = 179
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/178 (21%), Positives = 75/178 (42%), Gaps = 24/178 (13%)
Query: 1 MQYSTIFIILSAITMMSISG-------------IDNLDTKISSPDTVLNESSLQEQFSSS 47
M+ S++F L A +++ + T + + + +++ +
Sbjct: 1 MKRSSVFSFLVAFLLVAGCSHKMDNKTVAGDVSAKTVQTAPVTTEPAPEKEEPKQEPAPV 60
Query: 48 VGDS-----------VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRN 96
V + ++FD Y I+ +D + L + +++ L+EG+ DE GS
Sbjct: 61 VEEKPAIESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEFGSSE 120
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ ALG++R +V N V +G+ +K S+G+ P + Y +NRR V L
Sbjct: 121 YNQALGVKRTLSVKNALVIKGVEKDMIKTISFGETKPKCTQKTRECYKENRRVDVKLM 178
>gi|117928060|ref|YP_872611.1| OmpA/MotB domain-containing protein [Acidothermus cellulolyticus
11B]
gi|117648523|gb|ABK52625.1| OmpA/MotB domain protein [Acidothermus cellulolyticus 11B]
Length = 290
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 48/128 (37%), Gaps = 5/128 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
D+V + S V D V FDT +RP QVL + L D +EGH D
Sbjct: 150 ADSVKFRVETRGLIVSIVTDQVLFDTGKADLRPIGRQVLDAIAPVLRGLPNDISVEGHTD 209
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAK 145
+ S+ L RA V Y V+ RM T Y P V + +
Sbjct: 210 NVPITGGPFASNWELSAIRATTVLRYLVSNDGLPEERMSATGYADTRPLVPNDTPEHRQQ 269
Query: 146 NRRAIVFL 153
NRR + +
Sbjct: 270 NRRVDIVV 277
>gi|319409315|emb|CBI82959.1| Outer membrane lipoprotein omp16 homolog [Bartonella
schoenbuchensis R1]
Length = 173
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 46/129 (35%), Positives = 68/129 (52%), Gaps = 1/129 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFL 84
+ + + S + F+ +VGD VFF +S SI VL WL
Sbjct: 38 SSMGDANFSSAASGSTQDFTVNVGDRVFFSLNSSSIELDAEYVLKRQAEWLLRYPHYFVT 97
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+EGHAD+ G+R ++ALG RR+ AV +Y V+ G+S+ RMK SYGKE P D +
Sbjct: 98 VEGHADDRGTREYNLALGQRRSIAVRDYLVSLGVSSQRMKTISYGKERPVAVCDDISCWN 157
Query: 145 KNRRAIVFL 153
+NRR ++ +
Sbjct: 158 QNRRVVLTI 166
>gi|332995852|gb|AEF05907.1| outer membrane protein and related peptidoglycan-associated
(lipo)protein [Alteromonas sp. SN2]
Length = 202
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF-LIEGHAD 90
DT + + + + F T S SI P VL ++ + ++ +I+GH D
Sbjct: 74 DTGVQVVREGDNLRLIMPGDITFATDSSSISPNFNPVLQDVAKVVNNYEKTVLMIKGHTD 133
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
+ GS + L RRA AV N + ++++R+ G+ P V + NRR
Sbjct: 134 DTGSEQYNQGLSERRAGAVRNVLLNYSVNSTRITTVGMGEYQPKVPNDTAANRSMNRRVE 193
Query: 151 VFLK 154
+ ++
Sbjct: 194 LEIQ 197
>gi|297569175|ref|YP_003690519.1| OmpA/MotB domain protein [Desulfurivibrio alkaliphilus AHT2]
gi|296925090|gb|ADH85900.1| OmpA/MotB domain protein [Desulfurivibrio alkaliphilus AHT2]
Length = 251
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 46/131 (35%), Gaps = 6/131 (4%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHA 89
V E + + + DSV F ++ +L LG L ++EGH
Sbjct: 101 DAGLVTVEEDEAGEVTVRIRDSVAFAFGRADLKEDFKALLDQLGEILVTSQATMVVEGHT 160
Query: 90 DELGSRN-----SSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAY 143
D + R S+ AL R+ AV Y + R+ +Y P +
Sbjct: 161 DNVPMRPGAPFSSNWALSAARSVAVVEYLLEHYEIPRDRLAAEAYADSRPVAPNDTAEGR 220
Query: 144 AKNRRAIVFLK 154
A NRR ++
Sbjct: 221 AANRRVEFRIR 231
>gi|326792989|ref|YP_004310810.1| OmpA/MotB domain protein [Clostridium lentocellum DSM 5427]
gi|326543753|gb|ADZ85612.1| OmpA/MotB domain protein [Clostridium lentocellum DSM 5427]
Length = 240
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIA 100
+ + S D++ FD+ I+ A + L + L+ D ++EGH D L S +
Sbjct: 110 PQGLTLSFDDNILFDSGKADIQSAYKKNLLEICDILKTFTNDVVVEGHTDNLPIHTSQFS 169
Query: 101 -----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+R V + + AS++ SYG+ P + AKNRR + L
Sbjct: 170 SNWELASIRAINVVHLFIDEGKLPASKLSAISYGEYRPIASNDTPEGRAKNRRIDIIL 227
>gi|317012903|gb|ADU83511.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
Lithuania75]
Length = 179
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/177 (21%), Positives = 75/177 (42%), Gaps = 24/177 (13%)
Query: 1 MQYSTIFIILSAITMMSISG-------------IDNLDTKISSPDTVLNESSLQEQFSSS 47
M+ S++F L A +++ + T + + + +++ +
Sbjct: 1 MKRSSVFSFLVAFLLVAGCSHKMDNKTVAGDVSAKTVQTAPVTTEPAPEKEEPKQEPAPV 60
Query: 48 VGDS-----------VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRN 96
V + ++FD Y I+ +D + L + +++ L+EG+ DE GS
Sbjct: 61 VEEKPAIESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEFGSSE 120
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ ALG++R +V N V +G+ +K S+G+ P + Y +NRR V L
Sbjct: 121 YNQALGVKRTLSVKNALVIKGVEKDMIKTISFGETKPKCTQKTRECYKENRRVDVKL 177
>gi|124004460|ref|ZP_01689305.1| OmpA family protein [Microscilla marina ATCC 23134]
gi|123990032|gb|EAY29546.1| OmpA family protein [Microscilla marina ATCC 23134]
Length = 350
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 2/116 (1%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADELGSRNSS 98
E D+V FD + + RP L L L+++ + I GH D +G+ +
Sbjct: 232 SVETGEVYRLDNVSFDFNKATFRPFSKVELDKLVKLLKQYPAIVILITGHTDNIGTDTKN 291
Query: 99 IALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RRA V NY + +G + R++ G+ P + + A NRR +
Sbjct: 292 FDLSQRRAQTVANYLLTKGGVDPDRIRTEGMGETQPVMSNNTNTGRALNRRVEFRV 347
>gi|347155|gb|AAC36900.1| protein F [Pseudomonas fluorescens]
Length = 317
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 50/133 (37%), Gaps = 1/133 (0%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+G + E V V FD ++P + NL ++++
Sbjct: 183 AGAVAPAPTPAPAPEPTPEPEAPVAQVVRVELDVKFDFDKSVVKPNSYGDVKNLADFMKQ 242
Query: 79 H-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+ ++EGH D +G + L RRA AV V GI+ +R+ YGK P
Sbjct: 243 YPQTTTVVEGHTDSVGPDAYNQKLSQRRADAVKQVLVKDGIAPNRVSSVGYGKSRPVADN 302
Query: 138 HDEDAYAKNRRAI 150
E A NRR
Sbjct: 303 ATEAGRAINRRVE 315
>gi|347161|gb|AAC36903.1| protein F [Pseudomonas tolaasii]
Length = 317
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 1/108 (0%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALG 102
V V FD ++P + NL +++++ ++EGH D +G + L
Sbjct: 208 QVVRVELDVKFDFDKSVVKPNSYGDVKNLADFMKQYPQTTTVVEGHTDSVGPDAYNQKLS 267
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
RRA AV V GI+ +R+ YGK P E A NRR
Sbjct: 268 QRRADAVKQVLVKDGIAPNRVSSVGYGKSRPVADNATEAGRAINRRVE 315
>gi|148926911|ref|ZP_01810589.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni
subsp. jejuni CG8486]
gi|145844488|gb|EDK21596.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni
subsp. jejuni CG8486]
gi|284925406|gb|ADC27758.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
subsp. jejuni IA3902]
Length = 165
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 10/164 (6%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG--------DSV 52
M+ I + ++S + S S + + + V
Sbjct: 1 MKKILFISIAALAVVISGCSTKSTSVSGDSSVDSNRGSGGSDGWDIDSKISQLNDTLNKV 60
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHD--CDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+FD ++IRP V+S + +EG+ DE G+ + ALGL+RA AV
Sbjct: 61 YFDFDKFNIRPDMQNVVSTNANIFNTEVSGVSITVEGNCDEWGTDEYNQALGLKRAKAVK 120
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+A+G++A R+ V SYG+ P + A+NRRA L
Sbjct: 121 EALIAKGVNADRIAVKSYGETNPVCTEKTKACDAQNRRAEFKLS 164
>gi|189426486|ref|YP_001953663.1| OmpA/MotB domain protein [Geobacter lovleyi SZ]
gi|189422745|gb|ACD97143.1| OmpA/MotB domain protein [Geobacter lovleyi SZ]
Length = 280
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/126 (26%), Positives = 53/126 (42%), Gaps = 5/126 (3%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS--- 94
S Q S+ ++ FFD+ S ++ IQ L + L ++ F +EGH D +
Sbjct: 142 SITQRGLVISLKEAGFFDSGSAKLKSESIQTLRGIADTLSRYANRFRVEGHTDSMPIRST 201
Query: 95 -RNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
S+ L RA V ++ + G S + YG+ P V + AKNRR +
Sbjct: 202 EFRSNWELSTARATNVIHFLIDSAGFSPESLSAVGYGEFQPVVDNSTAEQRAKNRRVDIV 261
Query: 153 LKGCRA 158
L A
Sbjct: 262 LLADEA 267
>gi|146307724|ref|YP_001188189.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp]
gi|145575925|gb|ABP85457.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp]
Length = 270
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 52/139 (37%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ + + L S + ++GD +F + A+ VL +
Sbjct: 126 SVQQHNGWLEEQMVSLATSETERGLVMTLGDMLFDAGRADLQPAANRTVLKLVQFLQINP 185
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
IEG+ D GS ++ L RA AV + V GI A R++V YG + P
Sbjct: 186 QRRVRIEGYTDNTGSAEENLELSRARAQAVADLLVDLGIDAKRIQVVGYGVDFPVAENAS 245
Query: 140 EDAYAKNRRAIVFLKGCRA 158
A+NRR + R
Sbjct: 246 ARGRAQNRRVEIVFSDERG 264
>gi|28199574|ref|NP_779888.1| OmpA family protein [Xylella fastidiosa Temecula1]
gi|28057689|gb|AAO29537.1| OmpA family protein [Xylella fastidiosa Temecula1]
Length = 242
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 1/125 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGH 88
+ +T ++ + + ++ D + FD ++P L N+ S E + + G+
Sbjct: 104 TANTGIDVKRDGDNITLNLPDGITFDFGKSMLKPQFYGALKNVASTLREYNQTMIEVVGY 163
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D +GS + L RA AV +Y A+G+ RM+++ GK P E +KNRR
Sbjct: 164 TDSIGSDVVNQRLSEDRAGAVASYLAAQGVQRERMEISGMGKRYPIADNSTEAGRSKNRR 223
Query: 149 AIVFL 153
+ L
Sbjct: 224 VEIHL 228
>gi|118578992|ref|YP_900242.1| OmpA/MotB domain-containing protein [Pelobacter propionicus DSM
2379]
gi|118501702|gb|ABK98184.1| OmpA/MotB domain protein [Pelobacter propionicus DSM 2379]
Length = 224
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 55/133 (41%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
D + E ++ + FDT ++ + + L+ + L+ +
Sbjct: 79 DRQAAALKKNMPEAEVVRDGENVYVALPSGILFDTGKDELKTSAKESLAKAAATLKSSET 138
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
+ +I+GH D GS + L RRA V ++ A G+ +SRM YG P+V E
Sbjct: 139 NIIIQGHTDSTGSDKINQPLSQRRANQVRDFLAANGVPSSRMTAIGYGSSRPAVPNDTEV 198
Query: 142 AYAKNRRAIVFLK 154
A NRR + +
Sbjct: 199 NRALNRRVQLEIS 211
>gi|331007788|ref|ZP_08330902.1| 18K peptidoglycan-associated outer membrane lipoprotein [gamma
proteobacterium IMCC1989]
gi|330418397|gb|EGG92949.1| 18K peptidoglycan-associated outer membrane lipoprotein [gamma
proteobacterium IMCC1989]
Length = 171
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 76/161 (47%), Gaps = 12/161 (7%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISSPDTV-----------LNESSLQEQFSSSVGDS 51
++ ++ +A + + S + S+ + N S + +
Sbjct: 12 KTSFIVLAAAAFLTACSSTGTQEDAGSTTNVANNDPAPVVTTGSNGSDVNSGSVAPKASV 71
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
+FD S ++R +L + L+ +EGHADE G+R +IALG RRA +V
Sbjct: 72 FYFDFDSSALRADSRSLLDAHAAALKAKPRAVRLEGHADERGTREYNIALGERRAQSVRA 131
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
Y ++RG+++ ++V SYG+E P+ ++ A+ +NRR +
Sbjct: 132 YLLSRGVTSP-IEVISYGEEKPAANASNDYAWQQNRRVEIK 171
>gi|330872771|gb|EGH06920.1| ompA family protein [Pseudomonas syringae pv. morsprunorum str.
M302280PT]
gi|330964108|gb|EGH64368.1| ompA family protein [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 260
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 2/140 (1%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW- 75
+ + ++ D +I++ LN + + GD V FD + ++P + L ++
Sbjct: 110 AKARLEARDAQIAALKNSLNAKQTERGTLVTFGD-VLFDYNKAELKPTAQGDIGKLAAFL 168
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
E D ++EG+ D GS + + +L RRA +V V G+ +R+ YGKE P
Sbjct: 169 QENTDRKVIVEGYTDSTGSASYNQSLSERRANSVRMALVRMGVDPARVVTMGYGKEYPVA 228
Query: 136 YGHDEDAYAKNRRAIVFLKG 155
A NRR V +
Sbjct: 229 DNTSNSGRAMNRRVEVTISN 248
>gi|88810246|ref|ZP_01125503.1| OmpA-OmpF family porin [Nitrococcus mobilis Nb-231]
gi|88791876|gb|EAR22986.1| OmpA-OmpF family porin [Nitrococcus mobilis Nb-231]
Length = 230
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHA 89
T ++ + + ++ ++V FD S S++PA L+ + L+++D + GH
Sbjct: 104 QGTGVSVTRQGDAIILNMPNNVTFDIDSSSLKPAGANTLTGVAMVLKEYDQTGVNVVGHT 163
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G ++ L +RA +V + + +G++A+R++ G + P + A+NRR
Sbjct: 164 DSTGGHAHNMKLSKKRADSVASSLIIQGVAANRIRTAGVGPDDPIASNSTAEGRAQNRRV 223
Query: 150 IVFL 153
+ L
Sbjct: 224 EITL 227
>gi|330812625|ref|YP_004357087.1| hypothetical protein PSEBR_a5553 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327380733|gb|AEA72083.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 436
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 42/123 (34%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+ ++ ++ F + S SI+ ++ + + K L+ GH+D
Sbjct: 308 IAVEDAVDRSVVTIRGDELFASGSASIKDDFQPLMLRIADAVRKVKGQVLVTGHSDNRPI 367
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
S+ AL RA +V A+ R P + A+NRR
Sbjct: 368 ATLRFPSNWALSEARAQSVLQILSAKTGQPERFSAEGRSDTEPLASNATTEGRARNRRVE 427
Query: 151 VFL 153
+ +
Sbjct: 428 ITV 430
>gi|149276320|ref|ZP_01882464.1| OmpA/MotB [Pedobacter sp. BAL39]
gi|149232840|gb|EDM38215.1| OmpA/MotB [Pedobacter sp. BAL39]
Length = 448
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 1/136 (0%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
+G + + V+ + + ++ + F D +IR L+ + + L
Sbjct: 313 GAGCPLKTPRPIVTEKVIVTEADRRVVDEAIKNLEF-DLGKATIRSTSFNTLNRVAALLV 371
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+ + + GH D GS ++ L RA +V Y V++G++ASR++ T YG P
Sbjct: 372 EKNFSLKLAGHTDNTGSMALNLRLSKERAESVKAYLVSQGVNASRVEATGYGPNQPIATN 431
Query: 138 HDEDAYAKNRRAIVFL 153
+NRR L
Sbjct: 432 KTAAGRQQNRRVEFTL 447
>gi|312130019|ref|YP_003997359.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132]
gi|311906565|gb|ADQ17006.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132]
Length = 412
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/102 (33%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYA 108
D V+F+ I P + LS L +L+ + IEGH D G +++ L RAY
Sbjct: 304 DKVYFNVGQAQILPESYEQLSQLVQYLKVNPTYKIQIEGHTDNQGDARANLQLSNDRAYN 363
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
V Y + +GI SR+K YG P E+ KNRR
Sbjct: 364 VRQYLIEQGIETSRIKFKGYGSSKPVSPNDTEENRRKNRRVE 405
>gi|308184866|ref|YP_003928999.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
SJM180]
gi|308060786|gb|ADO02682.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
SJM180]
Length = 179
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/177 (21%), Positives = 75/177 (42%), Gaps = 24/177 (13%)
Query: 1 MQYSTIFIILSAITMMSISG-------------IDNLDTKISSPDTVLNESSLQEQFSSS 47
M+ S++F L A +++ + T + + + +++ +
Sbjct: 1 MKRSSVFSFLVAFLLVAGCSHKMDNKTVAGDVSAKTVQTAPVTTEPAPEKEEPKQEPAPV 60
Query: 48 VGDS-----------VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRN 96
V + ++FD Y I+ +D + L + +++ L+EG+ DE GS
Sbjct: 61 VEEKPAVESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEFGSSE 120
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ ALG++R +V N V +G+ +K S+G+ P + Y +NRR V L
Sbjct: 121 YNQALGVKRTLSVKNALVIKGVEKDMIKTISFGETKPKCTQKTRECYKENRRVDVKL 177
>gi|39995135|ref|NP_951086.1| OmpA domain-containing protein [Geobacter sulfurreducens PCA]
gi|39981897|gb|AAR33359.1| OmpA domain protein [Geobacter sulfurreducens PCA]
gi|298504165|gb|ADI82888.1| OmpA family outer membrane lipoprotein [Geobacter sulfurreducens
KN400]
Length = 194
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/134 (26%), Positives = 67/134 (50%), Gaps = 2/134 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW--LEKH 79
+ + + ++++ + + + + + ++FD ++ + LS +
Sbjct: 59 QTITEAPVAVASQASDTAGRAEAAETSLERIYFDFDAFVLSQTARDTLSRNAEALLKKMP 118
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ IEGH DE GS ++ALG +RA NY + G+ A+R+ + SYG+E P GH
Sbjct: 119 NAKVSIEGHCDERGSDEYNLALGEKRAKTAMNYLITLGVPAARLSIISYGEEKPLDPGHT 178
Query: 140 EDAYAKNRRAIVFL 153
E+A+AKNRR +
Sbjct: 179 EEAWAKNRRDEFVI 192
>gi|71901865|ref|ZP_00683927.1| OmpA/MotB [Xylella fastidiosa Ann-1]
gi|71728370|gb|EAO30539.1| OmpA/MotB [Xylella fastidiosa Ann-1]
Length = 241
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 1/125 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGH 88
+ +T ++ + + ++ D + FD ++P L N+ S E + + G+
Sbjct: 103 TANTGIDVKRDGDNITLNLPDGITFDFGKSMLKPQFYGALKNVASTLREYNQTMIEVVGY 162
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D +GS + L RA AV +Y A+G+ RM+++ GK P E +KNRR
Sbjct: 163 TDSIGSDVVNQRLSEDRAGAVASYLAAQGVQRERMEISGMGKRYPIADNSTEAGRSKNRR 222
Query: 149 AIVFL 153
+ L
Sbjct: 223 VEIHL 227
>gi|296410006|gb|ADH15779.1| OmpP6 [Haemophilus influenzae]
Length = 145
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 3/147 (2%)
Query: 5 TIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPA 64
++ ++ ++ N D + S+ + ++V+F Y I
Sbjct: 1 KSLLVAGSVAALAACSSSNNDAAGNGAAQTFGGYSVAD--LQQRYNTVYFGFDKYDITGE 58
Query: 65 DIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
+Q+L + L+EG+ DE G+ +IALG RRA AV Y +G+ A ++
Sbjct: 59 YVQILDAHAAYLNATPAAKVLVEGNTDERGTPEYNIALGQRRADAVKGYLAGKGVDAGKL 118
Query: 124 KVTSYGKEMPSVYGHDEDAYAKNRRAI 150
SYG+E P+V GHDE AY+KNRRA+
Sbjct: 119 GTVSYGEEKPAVLGHDEAAYSKNRRAV 145
>gi|86139806|ref|ZP_01058372.1| OmpA domain protein [Roseobacter sp. MED193]
gi|85823435|gb|EAQ43644.1| OmpA domain protein [Roseobacter sp. MED193]
Length = 218
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 48/115 (41%), Gaps = 1/115 (0%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRNSS 98
++ S+ + + F + S +I PA L + + + + GH D G + +
Sbjct: 100 TGDRLIVSLPNDLTFASDSAAISPAVESDLRQVAQSIVRYPNSSVQVIGHTDSDGDASYN 159
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L +RA V + A G+ +R++ G+ P + A+NRR + +
Sbjct: 160 QTLSEQRANTVADQVQAGGVPYNRLQTFGRGESQPVASNLTAEGKAQNRRVEIVI 214
>gi|326572627|gb|EGE22616.1| peptidoglycan-associated lipoprotein [Moraxella catarrhalis CO72]
Length = 186
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/157 (25%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 4 STIFIILSAITMMSISGIDNLDTKISS--------PDTVLNESSLQEQFSSSVGDSVFFD 55
++ ++ S S + + +++ + +S++ V+FD
Sbjct: 28 LSVLTFMTGCANKSTSQVMVAPNAPTGYTGVIYTGVAPLVDNDETIKTLASTLPSLVYFD 87
Query: 56 TSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
S I+P +L + L+ GH DE GSR +++LG RRA AV NY +
Sbjct: 88 FDSDEIKPQAAAILDEQAQFLTTNQTARVLVAGHTDERGSREYNMSLGERRAVAVRNYLL 147
Query: 115 ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+GI+ + +++ S+G+E P +G +E+A+++NRRA +
Sbjct: 148 GKGINQASVEIISFGEERPIAFGTNEEAWSQNRRAEL 184
>gi|289624411|ref|ZP_06457365.1| ompA family protein [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289646675|ref|ZP_06478018.1| ompA family protein [Pseudomonas syringae pv. aesculi str. 2250]
gi|330867435|gb|EGH02144.1| ompA family protein [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330987431|gb|EGH85534.1| ompA family protein [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 271
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 57/144 (39%), Gaps = 2/144 (1%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
++ + L + ++GD V FD ++ + + + + +
Sbjct: 123 AKLASAQQQGRWLEDQILSLATTETDRGLVMTLGD-VLFDAGHAELKSSASRTILKVVQF 181
Query: 76 LEKHDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
L+ + + IEG+ D G R ++ L RA AV + + G+ R+ V YG++ P
Sbjct: 182 LQINPRRVVRIEGYTDSTGDRQENLKLSKDRAQAVADVLMDLGVDEKRIHVEGYGQQFPV 241
Query: 135 VYGHDEDAYAKNRRAIVFLKGCRA 158
E A+NRR + +
Sbjct: 242 NANASERGRAQNRRVEIVFSDEKG 265
>gi|192361715|ref|YP_001982600.1| hypothetical protein CJA_2135 [Cellvibrio japonicus Ueda107]
gi|190687880|gb|ACE85558.1| hypothetical protein CJA_2135 [Cellvibrio japonicus Ueda107]
Length = 294
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 44/114 (38%), Gaps = 4/114 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ DS+ F + + + + + L+ + +EG D + ++
Sbjct: 152 LQIELKDSILFASGNADPSAQAMVIFDEISRILKNYSNPIQVEGFTDNVPINSARYPTNW 211
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA A+ ++GI+ R+ YG+ P + A+NRR + +
Sbjct: 212 ELSSARASAIVKILASKGIAPERLAAVGYGEFQPVASNATPEGRAQNRRVAIMV 265
>gi|160896293|ref|YP_001561875.1| OmpA/MotB domain-containing protein [Delftia acidovorans SPH-1]
gi|160361877|gb|ABX33490.1| OmpA/MotB domain protein [Delftia acidovorans SPH-1]
Length = 244
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 47/129 (36%), Gaps = 1/129 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFL 84
+ + V + Q + + FDT+ I+ +L + +
Sbjct: 82 EQATQGTGVNVSQTADNQLKLDIPSDISFDTNRSDIKGNFAPILDRFAEGLRNNPNAEVR 141
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
I GH D GS + L L RA + NY RG+S +R+ G P A
Sbjct: 142 IIGHTDSTGSDAINNPLSLDRANSTRNYLTMRGVSGARIATEGRGSHQPVASNDSASGRA 201
Query: 145 KNRRAIVFL 153
NRR +F+
Sbjct: 202 MNRRVEIFV 210
>gi|90021493|ref|YP_527320.1| NAD-dependent DNA ligase [Saccharophagus degradans 2-40]
gi|89951093|gb|ABD81108.1| OmpA/MotB [Saccharophagus degradans 2-40]
Length = 195
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/186 (17%), Positives = 65/186 (34%), Gaps = 30/186 (16%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISSPDT---------------------------VL 35
+++ +I SA + N DT +
Sbjct: 6 LASLIVIASATSFTVGCSTANTDTAGTENQNDYELVSMKIDQDVYNATGGKSAVVSVETP 65
Query: 36 NESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADEL 92
E +Q + + D V+F+ S + Q L L + +K + + +++G AD
Sbjct: 66 AEQEQPKQEITHIEDVVYFEFDSKELTAEAEQKLEKLANEAKKSENENIVVVLKGFADAT 125
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
G + L RA V + + G+ A V + G+ P + A+NRR ++
Sbjct: 126 GPEEYNQELSKERAQNVKAFLESNGVEAREYNVVALGESNPVADNDTKQGRAQNRRVVLV 185
Query: 153 LKGCRA 158
++ +
Sbjct: 186 IEPTES 191
>gi|330815667|ref|YP_004359372.1| OmpA domain protein [Burkholderia gladioli BSR3]
gi|327368060|gb|AEA59416.1| OmpA domain protein [Burkholderia gladioli BSR3]
Length = 171
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 16/168 (9%)
Query: 1 MQYSTIFIILSAITMMSISGI-------DNLDTKISSPDTVLNESSLQEQFSSSVGD--- 50
M + + L+ + + +++ D + + ++ T N + + + + D
Sbjct: 1 MMTNKARLALAVMMISALAACKSGVKLDDKANQQGNALQTQPNPTDVAQVNVDPLNDPNS 60
Query: 51 -----SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLR 104
S++FD SYS+ +L+ +L+ H LI+G+ DE G+ ++ALG +
Sbjct: 61 PLAKRSIYFDFDSYSVSDQYQSLLAQHAQYLKSHPARHILIQGNTDERGTSEYNLALGQK 120
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
RA AV G+ S+M+ S GKE P GHDE ++A+NRRA +
Sbjct: 121 RAEAVRRGLSLLGVPDSQMESVSLGKEKPQALGHDEASWAQNRRADIV 168
>gi|226946867|ref|YP_002801940.1| OmpA/MotB family protein [Azotobacter vinelandii DJ]
gi|226721794|gb|ACO80965.1| OmpA/MotB family protein [Azotobacter vinelandii DJ]
Length = 261
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 51/134 (38%), Gaps = 2/134 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHD 80
D +I L S + + GD V FD + ++P + + L +L
Sbjct: 115 QARDAQIRQLQEELQASHTERGTLVTFGD-VLFDYNRAELKPGGMHNVQKLADFLRANPQ 173
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++EG+ D GS + L RRA AV + GI R+ +GK P
Sbjct: 174 RQVIVEGYTDSTGSDAYNRDLSERRAGAVRIALIKMGIDPRRIATQGHGKNYPVTSNASP 233
Query: 141 DAYAKNRRAIVFLK 154
A NRR V +
Sbjct: 234 AGRAMNRRVEVTIS 247
>gi|330946399|gb|EGH47480.1| OmpA/MotB [Pseudomonas syringae pv. pisi str. 1704B]
Length = 213
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 57/144 (39%), Gaps = 2/144 (1%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
++ + L + ++GD V FD ++ + + + + +
Sbjct: 65 AKLASAQQQGRWLEDQILSLATTETDRGLVMTLGD-VLFDAGHAELKNSASRTILKVVQF 123
Query: 76 LEKHDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
L+ + + IEG+ D G R ++ L RA AV + + G+ R+ V YG+E P
Sbjct: 124 LQINPRRVVRIEGYTDSTGDRQDNLKLSKDRAQAVADVLMDLGVDEKRIHVEGYGQEFPV 183
Query: 135 VYGHDEDAYAKNRRAIVFLKGCRA 158
E A+NRR + +
Sbjct: 184 NANTSERGRAQNRRVEIVFSDEKG 207
>gi|153870654|ref|ZP_02000009.1| conserved hypothetical protein, secreted [Beggiatoa sp. PS]
gi|152072883|gb|EDN69994.1| conserved hypothetical protein, secreted [Beggiatoa sp. PS]
Length = 187
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/173 (19%), Positives = 63/173 (36%), Gaps = 21/173 (12%)
Query: 1 MQYSTIFIILSAITMMSISGI-----DNLDTKISSPDTVLNESSLQEQFSSS-------- 47
M+ T+ +L A ++ + D I++ ++ F
Sbjct: 11 MKNITLITLLLASINLAYAETPLPFPTTADEIINALTPKPTYQRERKGFIRDDKGVKAIR 70
Query: 48 -----VGDSVFFDTSSYSIRPADIQVLSNLGSWLEK--HDCDFLIEGHADELGSRNSSIA 100
VG + FD S I+P +L L+ D +I GH D G+ ++
Sbjct: 71 ADDPKVGALILFDFDSAVIKPESYPLLREFAKALQSGLVDAQIIIAGHTDNSGTETYNLN 130
Query: 101 LGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
L +R+ +V + ++ A R+ + ++G+ P E KNRR
Sbjct: 131 LSEQRSQSVKAFLISAYGIADTRLTIKAHGESQPIEPNETESGRMKNRRVEFI 183
>gi|71735961|ref|YP_274192.1| ompA family protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|71556514|gb|AAZ35725.1| ompA family protein [Pseudomonas syringae pv. phaseolicola 1448A]
Length = 271
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 57/144 (39%), Gaps = 2/144 (1%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
++ + L + ++GD V FD ++ + + + + +
Sbjct: 123 AKLASAQQQGRWLEDQILSLATTETDRGLVMTLGD-VLFDAGHAELKSSASRTILKVVQF 181
Query: 76 LEKHDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
L+ + + IEG+ D G R ++ L RA AV + + G+ R+ V YG++ P
Sbjct: 182 LQINPRRVVRIEGYTDSTGDRQENLKLSKDRAQAVADVLMDLGVDEKRIHVEGYGQQFPV 241
Query: 135 VYGHDEDAYAKNRRAIVFLKGCRA 158
E A+NRR + +
Sbjct: 242 NANASERGRAQNRRVEIVFSDEKG 265
>gi|260768865|ref|ZP_05877799.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
furnissii CIP 102972]
gi|260616895|gb|EEX42080.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
furnissii CIP 102972]
gi|315180558|gb|ADT87472.1| Peptidoglycan-associated lipoprotein [Vibrio furnissii NCTC 11218]
Length = 179
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 49/179 (27%), Positives = 80/179 (44%), Gaps = 28/179 (15%)
Query: 1 MQYST----IFIILSAITMMSISG----------------------IDNLDTKISSPDTV 34
MQ + + I L + + + S +D +
Sbjct: 1 MQLNKVLKGLLIALPVLAVTACSSSDEAANASGSETNQTTSGTAGNVDTTVVSPMDENAQ 60
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELG 93
L+E L+EQ + +++F + +I ++L+ + + IEGHADE G
Sbjct: 61 LSEQELKEQ-ALRETQTIYFAFDNATIASDYEEMLAAHAVYLTKNPSLKVTIEGHADERG 119
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ +IALG RRA AV Y A G+ A ++ + SYG+E P + G E+ YAKNRRA++
Sbjct: 120 TPEYNIALGERRAQAVAKYLEALGVQADQIAIVSYGEEKPLLLGQTEEVYAKNRRAVLV 178
>gi|226310457|ref|YP_002770351.1| chemotaxis MotB protein [Brevibacillus brevis NBRC 100599]
gi|226093405|dbj|BAH41847.1| chemotaxis MotB protein [Brevibacillus brevis NBRC 100599]
Length = 269
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 46/132 (34%), Gaps = 5/132 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ + L E ++ D+ FD+ ++P ++ S + L H +
Sbjct: 124 QQNKLQDKLQTKLTDEGLLITILDNALFDSGKADLKPEARKLASEMAGMLVPHPKKVTVT 183
Query: 87 GHADELGSRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
GH D + R + R + + + ++ T G+ P ++
Sbjct: 184 GHTDNVPIRRAEFPSNWDLSAKRSVNFLKVLLENKNLDPTKFSATGLGEYHPVAPNTTDE 243
Query: 142 AYAKNRRAIVFL 153
AKNRR V +
Sbjct: 244 GRAKNRRVEVAI 255
>gi|225025598|ref|ZP_03714790.1| hypothetical protein EIKCOROL_02500 [Eikenella corrodens ATCC
23834]
gi|224941636|gb|EEG22845.1| hypothetical protein EIKCOROL_02500 [Eikenella corrodens ATCC
23834]
Length = 183
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 54/141 (38%), Gaps = 8/141 (5%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ + +SS + L+ + ++ V FD ++P L + +
Sbjct: 36 SLSAQGSNLSSQGSGLSATETGFNIEINLSSDVLFDFDKAELKPEADADLQKAADIIRQK 95
Query: 80 -DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG- 137
LI GH D GS + L L RA AV N+F A+G+ ++ G P
Sbjct: 96 GQGVILITGHTDSKGSDAYNQRLSLARAQAVKNWFEAKGLQ-QNYQLEGLGATRPIAPNT 154
Query: 138 -----HDEDAYAKNRRAIVFL 153
+ + A+NRR + +
Sbjct: 155 HPDGSDNPEGRAQNRRVEIIV 175
>gi|254482517|ref|ZP_05095756.1| peptidoglycan-associated lipoprotein, putative [marine gamma
proteobacterium HTCC2148]
gi|214037208|gb|EEB77876.1| peptidoglycan-associated lipoprotein, putative [marine gamma
proteobacterium HTCC2148]
Length = 174
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 66/111 (59%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIAL 101
+++ G+ +FD SY++ P + L S ++ ++ + +EGH DE G+R ++AL
Sbjct: 64 RDAAAAYGNVFYFDYDSYNLNPDAVSALDAHISAMQGNEANVRLEGHTDERGTREYNMAL 123
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
G RRA AV +Y V G+S+ R++ SYG+E P YG E +A+NRR +
Sbjct: 124 GERRANAVRDYMVVNGVSSYRIETVSYGEERPIAYGSGESNWAQNRRVELK 174
>gi|162456349|ref|YP_001618716.1| exported OmpA domain-containing protein [Sorangium cellulosum 'So
ce 56']
gi|161166931|emb|CAN98236.1| exported OmpA domain protein [Sorangium cellulosum 'So ce 56']
Length = 610
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 52/138 (37%), Gaps = 2/138 (1%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
+ ++ + + V FDT +I+P +L + L+
Sbjct: 456 ACPREKGFADPDPEKNGCPKAVRVTEKHVVILQQVQFDTDKATIKPVSDPLLDEVAEVLK 515
Query: 78 KHD--CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+H I+GH D G+ + L RA +V V RGI ++R+ YG+E P
Sbjct: 516 EHPEIVLIEIQGHTDNRGTVEHNRILSQNRANSVMAALVRRGIDSTRLTAQGYGREQPID 575
Query: 136 YGHDEDAYAKNRRAIVFL 153
E +NRR +
Sbjct: 576 DNATEAGRQRNRRVQFNI 593
>gi|262401486|ref|ZP_06078054.1| outer membrane protein A precursor [Vibrio sp. RC586]
gi|262352307|gb|EEZ01435.1| outer membrane protein A precursor [Vibrio sp. RC586]
Length = 109
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 40/102 (39%), Gaps = 1/102 (0%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
F S I L+ + S + + GH D GS + + RA AV N
Sbjct: 1 MFGFDSVEPSQEFIDQLTEISSVLISYPQAQAKVVGHTDSTGSALYNQNISEHRAQAVVN 60
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ G++ ++++ G+ P + + A NRR + +
Sbjct: 61 KLIELGVTPTQLEWRGEGEFQPVADNNTAEGRAANRRVEITI 102
>gi|237703321|ref|ZP_04533802.1| OmpA family protein [Escherichia sp. 3_2_53FAA]
gi|226902585|gb|EEH88844.1| OmpA family protein [Escherichia sp. 3_2_53FAA]
gi|315285303|gb|EFU44748.1| OmpA family protein [Escherichia coli MS 110-3]
gi|323954903|gb|EGB50683.1| OmpA family protein [Escherichia coli H263]
Length = 219
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD+SS +++PA L+ + L+++ + G+ D
Sbjct: 94 GTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + ++ L +RA +V + + +G+ ASR++ G P + A+NRR
Sbjct: 154 STGSHDLNMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVE 213
Query: 151 VFLK 154
+ L
Sbjct: 214 ITLS 217
>gi|71734248|ref|YP_276006.1| ompA family protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|257487118|ref|ZP_05641159.1| ompA family protein [Pseudomonas syringae pv. tabaci ATCC 11528]
gi|289626062|ref|ZP_06459016.1| ompA family protein [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289646239|ref|ZP_06477582.1| ompA family protein [Pseudomonas syringae pv. aesculi str. 2250]
gi|298488307|ref|ZP_07006339.1| Outer membrane lipoprotein omp16 precursor [Pseudomonas savastanoi
pv. savastanoi NCPPB 3335]
gi|71554801|gb|AAZ34012.1| ompA family protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|298157129|gb|EFH98217.1| Outer membrane lipoprotein omp16 precursor [Pseudomonas savastanoi
pv. savastanoi NCPPB 3335]
gi|320323146|gb|EFW79235.1| ompA family protein [Pseudomonas syringae pv. glycinea str. B076]
gi|320329582|gb|EFW85571.1| ompA family protein [Pseudomonas syringae pv. glycinea str. race 4]
gi|330867556|gb|EGH02265.1| ompA family protein [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330878322|gb|EGH12471.1| ompA family protein [Pseudomonas syringae pv. glycinea str. race 4]
gi|330892526|gb|EGH25187.1| ompA family protein [Pseudomonas syringae pv. mori str. 301020]
gi|330985082|gb|EGH83185.1| ompA family protein [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|331009256|gb|EGH89312.1| ompA family protein [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 260
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 2/140 (1%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW- 75
+ + ++ D +I++ LN + + GD V FD + ++P + L ++
Sbjct: 110 AKARLEARDAQIAALKNSLNAKQTERGTLVTFGD-VLFDYNKADLKPTAQGDIGKLAAFL 168
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
E D ++EG+ D GS + + +L RRA +V V G+ +R+ YGKE P
Sbjct: 169 QENPDRKVIVEGYTDSTGSASYNQSLSERRANSVRMALVRMGVDPARVVTMGYGKEYPVA 228
Query: 136 YGHDEDAYAKNRRAIVFLKG 155
A NRR V +
Sbjct: 229 DNTSNSGRAMNRRVEVTISN 248
>gi|39996116|ref|NP_952067.1| chemotaxis MotB protein [Geobacter sulfurreducens PCA]
gi|39982881|gb|AAR34340.1| chemotaxis MotB protein, putative [Geobacter sulfurreducens PCA]
Length = 289
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 57/131 (43%), Gaps = 8/131 (6%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHA 89
+ S L+ + + ++ D++ FD+ ++PA + +L + L+ IEGH
Sbjct: 153 AQGQVTISELKGKLTVNMVDAILFDSGKAEVKPAGMDLLQKVVEILKDVKDKAIRIEGHT 212
Query: 90 DELGS-------RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
D + ++ L RA V + +RGI + + +YG+ P ++
Sbjct: 213 DNVQIVGNLAKRFPTNWELSSARAINVTRFLQSRGIDPAVLSAVAYGEYHPVAPNDTDEG 272
Query: 143 YAKNRRAIVFL 153
AKNRR + L
Sbjct: 273 KAKNRRIEIIL 283
>gi|316935074|ref|YP_004110056.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
DX-1]
gi|315602788|gb|ADU45323.1| OmpA/MotB domain protein [Rhodopseudomonas palustris DX-1]
Length = 446
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 51/133 (38%), Gaps = 1/133 (0%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-C 81
+ + + + + + F+ S I A +L L + +++
Sbjct: 314 KTASATGELPVASTQDCQGRVTAVASAEKINFERRSAVIDKASQPLLGKLAAAIKQCPAV 373
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
+ G+ D G +++++AL RRA AV GI + ++ YG P +
Sbjct: 374 TIEVAGYTDAAGKKSTNLALSKRRAEAVVASLTKAGIGSVKLVAEGYGSAKPIASNDTAE 433
Query: 142 AYAKNRRAIVFLK 154
A+NRR +K
Sbjct: 434 GRAQNRRIEFVVK 446
>gi|225849649|ref|YP_002729883.1| flagellar motor protein MotB [Persephonella marina EX-H1]
gi|225645473|gb|ACO03659.1| flagellar motor protein MotB [Persephonella marina EX-H1]
Length = 231
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 1/102 (0%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSI-ALGLRRAYAVFN 111
F + S + + +L + L++ IEGH D R S L RA +V
Sbjct: 126 MFPSGSATPYKEVVPLLLEVCKRLKETQFPITIEGHTDNTPIRFKSNLELSAERALSVLK 185
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
F + G + YG+ P V + AKNRR + +
Sbjct: 186 LFKSCGYPDRLLSARGYGEYRPLVPNDTPENRAKNRRIEIVI 227
>gi|149277661|ref|ZP_01883801.1| possible outer membrane protein [Pedobacter sp. BAL39]
gi|149231349|gb|EDM36728.1| possible outer membrane protein [Pedobacter sp. BAL39]
Length = 174
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/172 (18%), Positives = 69/172 (40%), Gaps = 20/172 (11%)
Query: 1 MQYSTIFIILSAITMMSIS--GIDNLDTKISSPDTVLNESSLQEQFSSSVG--------- 49
M++ ++L+A+ + IS + V+ +
Sbjct: 1 MKFFKPQLLLAAVLLFGISLQSCKSKKVVAKPTPPVVAPKPEPVEEKQPEPEPAPEPAPV 60
Query: 50 --------DSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIA 100
+++ F+ +S ++ A ++L + ++K F++ G++ GS +++
Sbjct: 61 PEKASYNFNNIQFEFNSDVLKTASFEILDQVVREMKKDLTVGFVLNGNSSAEGSVEHNLS 120
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
L + RA +V +Y V GI A+ + + +G P E+ A NRR +
Sbjct: 121 LSVDRANSVKSYLVNAGIPAANLSIKGFGATKPITTNDSEEGRALNRRVEIK 172
>gi|28869391|ref|NP_792010.1| ompA family protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213968194|ref|ZP_03396339.1| ompA family protein [Pseudomonas syringae pv. tomato T1]
gi|301383801|ref|ZP_07232219.1| ompA family protein [Pseudomonas syringae pv. tomato Max13]
gi|302060757|ref|ZP_07252298.1| ompA family protein [Pseudomonas syringae pv. tomato K40]
gi|302131856|ref|ZP_07257846.1| ompA family protein [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|28852632|gb|AAO55705.1| ompA family protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213927174|gb|EEB60724.1| ompA family protein [Pseudomonas syringae pv. tomato T1]
gi|331018607|gb|EGH98663.1| ompA family protein [Pseudomonas syringae pv. lachrymans str.
M302278PT]
Length = 271
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/145 (20%), Positives = 59/145 (40%), Gaps = 2/145 (1%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
++ + L + ++GD V FD ++ + + + + +
Sbjct: 123 AKLASAQQQGRWLEDQILSLATTQTDRGLVMTLGD-VLFDAGHAELKSSASRTILKVVQF 181
Query: 76 LEKHDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
L+ + + IEG+ D G R ++ L RA AV + + G+ R++V YG++ P
Sbjct: 182 LQINPRRVVRIEGYTDSTGDREDNLTLSKDRAQAVADVLMDLGVDDKRIQVEGYGQQFPV 241
Query: 135 VYGHDEDAYAKNRRAIVFLKGCRAN 159
E A+NRR + + +
Sbjct: 242 DANASERGRAQNRRVEIVFSDEKGH 266
>gi|298505133|gb|ADI83856.1| OmpA family outer membrane lipoprotein [Geobacter sulfurreducens
KN400]
Length = 289
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 8/131 (6%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHA 89
+ S L+ + + ++ D++ FD+ ++PA + +L + L+ IEGH
Sbjct: 153 AQGQVTISELKGKLTVNMVDAILFDSGKAEVKPAGMDILQKVVEILKDVTDKAIRIEGHT 212
Query: 90 DELGS-------RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
D + S+ L RA V + +RGI + + +YG+ P ++
Sbjct: 213 DNVQIVGNLAKRFPSNWELSSARAINVTRFLQSRGIDPAVLSAVAYGEYHPVAPNDTDEG 272
Query: 143 YAKNRRAIVFL 153
AKNRR + L
Sbjct: 273 KAKNRRIEIIL 283
>gi|254510549|ref|ZP_05122616.1| OmpA domain protein [Rhodobacteraceae bacterium KLH11]
gi|221534260|gb|EEE37248.1| OmpA domain protein [Rhodobacteraceae bacterium KLH11]
Length = 223
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 57/133 (42%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
+ + + + ++ ++ +V + + F T S ++ PA L +G + +
Sbjct: 85 QAAELRQQLANDGIIITNAGDRLIVTVPNDITFATDSSTVNPALRADLVRVGQNLVRYPN 144
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ GH D G + + L RRA +V + A G++ +R+ G+ P+
Sbjct: 145 SSVQVIGHTDSTGEASYNQGLSERRARSVADILQANGVNGARLSTIGLGENRPAASNLTP 204
Query: 141 DAYAKNRRAIVFL 153
+ A+NRR + +
Sbjct: 205 EGRARNRRVDIEI 217
>gi|78187197|ref|YP_375240.1| OmpA family protein [Chlorobium luteolum DSM 273]
gi|78167099|gb|ABB24197.1| OmpA family protein [Chlorobium luteolum DSM 273]
Length = 229
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 49/133 (36%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
D +I + E + F T S +I + L D
Sbjct: 80 DKQAAEIDRDVDGARVERVGESIRVVFDSGILFTTGSATITSTSRYNIEKLARILNRYPD 139
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ +IEGH D +GS + L RRA +V G+S+SR+ YG+ P E
Sbjct: 140 TNMVIEGHTDSIGSETQNQLLSERRAESVATLLKTYGVSSSRLSPVGYGETRPVASNETE 199
Query: 141 DAYAKNRRAIVFL 153
+NRR V +
Sbjct: 200 TGRRQNRRVEVLI 212
>gi|74316145|ref|YP_313885.1| outer membrane protein [Thiobacillus denitrificans ATCC 25259]
gi|74055640|gb|AAZ96080.1| outer membrane protein [Thiobacillus denitrificans ATCC 25259]
Length = 415
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 52/126 (41%), Gaps = 1/126 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGH 88
+ Q + + V F S +RP + VL + + D + GH
Sbjct: 290 QTEQAAQLERSQAGDVVVLPEGVNFAFDSAELRPDAVTVLDEAVTVLNRRTDIKVDVVGH 349
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
+G + L RRA +V++YF+ G++A R+ YG+ P+ + KNRR
Sbjct: 350 TCNIGPEAYNQGLSERRAKSVYDYFIDNGVAADRLTTQGYGETRPAYSNDTREGREKNRR 409
Query: 149 AIVFLK 154
+ +K
Sbjct: 410 VELHVK 415
>gi|110638825|ref|YP_679034.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
gi|110281506|gb|ABG59692.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
Length = 320
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 6/138 (4%)
Query: 22 DNLDTKISSPDTVLNE-----SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
D D S+P N ++ D++ F+T S I + Q L +L L
Sbjct: 181 DYSDLCPSTPGPKTNRGCPELKPAEKAALQKAFDNLLFETGSDVIVSSSFQSLDDLAKVL 240
Query: 77 EKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+ + IEGH D +G +++ L RRA +V NY V++G+ A+R+ +G+ P
Sbjct: 241 RNNPLYNLYIEGHTDNVGDDEANLDLSKRRAISVKNYLVSKGVGAARLTTDGFGEARPVD 300
Query: 136 YGHDEDAYAKNRRAIVFL 153
+ KNRR + +
Sbjct: 301 TNDTPEGRKKNRRVEMHI 318
>gi|326576289|gb|EGE26204.1| outer membrane protein CD [Moraxella catarrhalis CO72]
Length = 453
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 49/149 (32%), Gaps = 9/149 (6%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+ G + P + +L E+ + VFFD I+P + ++ + + +
Sbjct: 299 ACPGTPV--NAVVDPRGCPVQVNLVEELRQEL--RVFFDYDKSIIKPQYREEVAKVAAQM 354
Query: 77 EKHD---CDFLIEGHADE-LGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKE 131
+ D S + L RA AV + +R+ YG +
Sbjct: 355 REFPNATATIEGHASRDSARSSARYNQRLSEARANAVKSMLSNEFGIAPNRLNAVGYGFD 414
Query: 132 MPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
P + A NRR + G + T
Sbjct: 415 RPIAPNTTAEGKAMNRRVEAVITGSKTTT 443
>gi|330991879|ref|ZP_08315828.1| Outer membrane lipoprotein omp16 [Gluconacetobacter sp. SXCC-1]
gi|329760900|gb|EGG77395.1| Outer membrane lipoprotein omp16 [Gluconacetobacter sp. SXCC-1]
Length = 156
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 2/149 (1%)
Query: 1 MQYSTIFIILSAITMMSISG-IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSY 59
M+ + A+ + + S D ++ V + ++ GD V F
Sbjct: 1 MKLKLLGAAGMALFLAACSDHADKNVNTGAATQQVGPAPGSEADLVATAGDRVLFALKQS 60
Query: 60 SIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI 118
++ L +W + I G+ D+ G+ +IALG RRA A +Y VA+G+
Sbjct: 61 TLSSDAKAELDKQAAWLAKYPQVHVQIAGNCDDRGTEEYNIALGERRANAAHDYLVAKGV 120
Query: 119 SASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
ASRM SYGK+ P+ G DE ++A+NR
Sbjct: 121 DASRMTTISYGKDRPTAVGDDEASWAQNR 149
>gi|255067217|ref|ZP_05319072.1| OmpA family protein [Neisseria sicca ATCC 29256]
gi|255048585|gb|EET44049.1| OmpA family protein [Neisseria sicca ATCC 29256]
Length = 261
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+T + Q + ++V F T S ++ L+ ++ D I GH D
Sbjct: 125 NTNIEVERQGNQIKLVMPENVTFATGSAALSDQARNALATASETLVQYPDTTLTINGHTD 184
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G+ + L RA AV +Y +RG++ SR+ YG P + A+NRR
Sbjct: 185 NTGNDAINEPLSRNRALAVADYLQSRGVNGSRLTTAGYGSRHPIASNATAEGRAQNRRVE 244
Query: 151 VFL 153
+ +
Sbjct: 245 ILI 247
>gi|163760609|ref|ZP_02167690.1| OmpA/MotB [Hoeflea phototrophica DFL-43]
gi|162282224|gb|EDQ32514.1| OmpA/MotB [Hoeflea phototrophica DFL-43]
Length = 588
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 51/138 (36%), Gaps = 1/138 (0%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW- 75
+ + ++ K + + S +++ FDT I+ L +
Sbjct: 449 AFAAQQSVALKPLPSEDLSGPSCQNVLNQLLAANTIRFDTGQAGIQHHSFGFLDRIAFAA 508
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+ D I GH D G ++ L RRA AV Y VA G+ R+ YG+ P
Sbjct: 509 RQCRDVRLEISGHTDADGDEGANQTLSERRAEAVVAYMVAAGVGPDRVVAIGYGESRPVA 568
Query: 136 YGHDEDAYAKNRRAIVFL 153
+ A NRR + +
Sbjct: 569 DNETDTGKAANRRIEIRV 586
>gi|116327052|ref|YP_796772.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
L550]
gi|116332289|ref|YP_802007.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
JB197]
gi|116119796|gb|ABJ77839.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
L550]
gi|116125978|gb|ABJ77249.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
JB197]
Length = 458
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 50/136 (36%), Gaps = 2/136 (1%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ + E E+ + +SV FD +S ++ L + S L+K+
Sbjct: 320 EENKTKQETMKVSGSPVEIRRTEEGIAISLNSVLFDYNSSQLKDEAKLELRRIASVLKKY 379
Query: 80 -DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV-ARGISASRMKVTSYGKEMPSVYG 137
D + I GH D G + L RA +V +G+ RM YGK P
Sbjct: 380 GDREIRISGHTDNSGGDEYNRKLSRERALSVLKELRDEQGLEEKRMSYEGYGKSKPIADN 439
Query: 138 HDEDAYAKNRRAIVFL 153
KNRR + +
Sbjct: 440 STAQGRQKNRRVDITI 455
>gi|300023765|ref|YP_003756376.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888]
gi|299525586|gb|ADJ24055.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888]
Length = 716
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 51/129 (39%), Gaps = 1/129 (0%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLI 85
+ + + +S +S ++ F+ + + Q L +L + I
Sbjct: 586 TVMTGEEKAADSCQTLMRQTSAKGTINFERAKADLTSDSTQTLRDLVEVANECPSFSIEI 645
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
EGH D G+ + L RRA AV ++ G+SA R+ YG P E AK
Sbjct: 646 EGHTDAEGTDERNQRLSDRRARAVADFLTQNGVSARRLSTIGYGATRPVADNATETGRAK 705
Query: 146 NRRAIVFLK 154
NRR +K
Sbjct: 706 NRRIEFNVK 714
>gi|70728526|ref|YP_258275.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
gi|68342825|gb|AAY90431.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
Length = 262
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 2/135 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
D D +I LN + GD V F T+ ++ + + ++ L + + D
Sbjct: 115 DARDAQIKQLQDSLNAKQTDRGTLVTFGD-VLFATNKSDLKSSGLVNINKLAQFLQQNPD 173
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++EG+ D GS + + +L RRA +V + GI +R+ YGKE P
Sbjct: 174 RKVIVEGYTDSTGSDSYNQSLSERRAGSVQMALIRMGIDPARIVSQGYGKEYPVADNGSV 233
Query: 141 DAYAKNRRAIVFLKG 155
A NRR V +
Sbjct: 234 SGRAMNRRVEVTISN 248
>gi|323498433|ref|ZP_08103429.1| outer membrane protein A precursor [Vibrio sinaloensis DSM 21326]
gi|323316506|gb|EGA69521.1| outer membrane protein A precursor [Vibrio sinaloensis DSM 21326]
Length = 322
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIA 100
+ F + V DS F +S ++P Q+L+ + E + + G+ D G+ +
Sbjct: 202 KTFETKVVDSGSFALNSTELKPESKQILNELVVFMNEYPQANVEVVGYTDTSGAAAYNQK 261
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L +RA +V + A GI ASR+ V G+ P ++ +NRR + +
Sbjct: 262 LSEKRAQSVSDALQAEGIDASRITVRGEGENNPIASNETKEGRVQNRRVEITV 314
>gi|162448390|ref|YP_001610757.1| putative ompA family protein [Sorangium cellulosum 'So ce 56']
gi|161158972|emb|CAN90277.1| putative ompA family protein [Sorangium cellulosum 'So ce 56']
Length = 617
Score = 82.2 bits (201), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 51/138 (36%), Gaps = 2/138 (1%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
+ + + + V FDT +I+ +L + L+
Sbjct: 468 ACPDEKGKPDPDPTKNGCPVAVRMTETEIVILQQVQFDTGKATIKKVSDPLLDEVAGVLK 527
Query: 78 KHD--CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+H ++GH D G R +I L RA +V V RGI A R+ YG ++P
Sbjct: 528 EHPEITKIEVQGHTDPRGGRAYNIKLSQARAESVTKALVQRGIEAERLASKGYGPDVPIA 587
Query: 136 YGHDEDAYAKNRRAIVFL 153
++ KNRR +
Sbjct: 588 ENDTDEGRQKNRRVQFKI 605
>gi|157736742|ref|YP_001489425.1| outer membrane fibronectin-binding protein [Arcobacter butzleri
RM4018]
gi|157698596|gb|ABV66756.1| outer membrane fibronectin-binding protein [Arcobacter butzleri
RM4018]
Length = 338
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 52/134 (38%), Gaps = 1/134 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-K 78
G +D P+T+ + V ++ FDT I+ + ++ ++
Sbjct: 202 GDGVIDNLDECPNTMKGAKVDNIGCMTLVNLNINFDTDKSVIKDSYNSRINEFAKVMKAD 261
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
IE H D +G+ + L RRA + N VA G+ R+K YG+ P
Sbjct: 262 PKLKANIEAHTDSVGTDAYNQKLSERRATSAVNALVAAGVEKDRIKAVGYGESRPIASND 321
Query: 139 DEDAYAKNRRAIVF 152
+ A+NRR
Sbjct: 322 TVEGRAENRRVEAV 335
>gi|329900833|ref|ZP_08272601.1| Outer membrane protein A precursor [Oxalobacteraceae bacterium
IMCC9480]
gi|327549361|gb|EGF33931.1| Outer membrane protein A precursor [Oxalobacteraceae bacterium
IMCC9480]
Length = 214
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query: 58 SYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
++P L +L S L+ + + +I GH D +GS + L +RR+ AV Y V++
Sbjct: 112 KSVLKPDGKAKLDDLASKLQGMNLEVIIAVGHTDSVGSDAYNQKLSVRRSEAVKAYLVSK 171
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
GI A+R+ G++ P AKNRR + + G R
Sbjct: 172 GIEANRVYTEGKGEKQPVADNKSAAGRAKNRRVEIEVVGTR 212
>gi|289208360|ref|YP_003460426.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
gi|288943991|gb|ADC71690.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
Length = 305
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 51/144 (35%), Gaps = 4/144 (2%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+ ++ + D L S + + F + S ++ P +L +G
Sbjct: 124 ALAEVADELEMAMAPLIEDGDLRVSREAYWLEIEITSRLLFGSGSATLNPEARSLLDEVG 183
Query: 74 SWLEKHDCDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
+ L +EGH D + S+ L RA AV + F GI + YG
Sbjct: 184 AILAPRVSRVHVEGHTDNVPIQTAVYPSNWELSSGRAAAVVSVFEDAGIEPKNLVALGYG 243
Query: 130 KEMPSVYGHDEDAYAKNRRAIVFL 153
+ P E A+NRR + +
Sbjct: 244 EHRPVASNDTEQGRAENRRVAIVV 267
>gi|149277299|ref|ZP_01883441.1| OmpA/MotB [Pedobacter sp. BAL39]
gi|149232176|gb|EDM37553.1| OmpA/MotB [Pedobacter sp. BAL39]
Length = 464
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 57/134 (42%), Gaps = 5/134 (3%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+ + +D + +T + ++S F +V F+ +S ++ L L S L
Sbjct: 332 AGTAVDGSGCPLPKMETAVADNSNLTGFE-----TVQFEFNSSVLKTESYPTLDKLSSVL 386
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
++ + G+A G+ ++ L RA +V Y V G+++S + +G+ P
Sbjct: 387 RENGGKVTLHGYASSEGTAAYNVKLSKDRANSVKTYLVNSGVNSSAVVTKGHGEANPIAS 446
Query: 137 GHDEDAYAKNRRAI 150
E+ +NRR
Sbjct: 447 NDTEEGRIQNRRVE 460
>gi|222869877|gb|EEF07008.1| predicted protein [Populus trichocarpa]
Length = 219
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 47/129 (36%), Gaps = 1/129 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFL 84
+ + V + Q + + FDT+ I+ +L + +
Sbjct: 60 EQATQGTGVNVSQTADNQLKLDIPSDISFDTNRSDIKGNFAPILDRFAEGLRNNPNAEVR 119
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
I GH D GS + L L RA + NY RG+S +R+ G P A
Sbjct: 120 IIGHTDSTGSDAINNPLSLDRANSTRNYLTMRGVSGARIATEGRGSHQPVASNDSASGRA 179
Query: 145 KNRRAIVFL 153
NRR +F+
Sbjct: 180 MNRRVEIFV 188
>gi|187922763|ref|YP_001894405.1| peptidoglycan-associated lipoprotein [Burkholderia phytofirmans
PsJN]
gi|187713957|gb|ACD15181.1| peptidoglycan-associated lipoprotein [Burkholderia phytofirmans
PsJN]
Length = 169
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 12/163 (7%)
Query: 2 QYSTIFIILSAITMMSI-------SGIDNLDTKISSPDT----VLNESSLQEQFSSSVGD 50
+ F +L + + + T + P+ +N L + S
Sbjct: 4 KLRFAFAVLMVGALAACHSGVKLDENANKGGTVSAQPNPNDVATVNVDPLNDPNSPLAKR 63
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAV 109
S++FD SYS++ +L +L+ H LI+G+ DE G+ ++ALG +RA AV
Sbjct: 64 SIYFDFDSYSVKDDYQSLLQQHAQYLKSHPQRHVLIQGNTDERGTSEYNLALGQKRAEAV 123
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
G++ S+M+ S GKE P GHDE ++A+NRRA +
Sbjct: 124 RRSLSLMGVTDSQMEAVSLGKEKPQATGHDESSWAQNRRADLV 166
>gi|330500929|ref|YP_004377798.1| hypothetical protein MDS_0015 [Pseudomonas mendocina NK-01]
gi|328915215|gb|AEB56046.1| hypothetical protein MDS_0015 [Pseudomonas mendocina NK-01]
Length = 443
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 41/123 (33%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+ ++ ++ F + S SIR +L + + K I GH+D
Sbjct: 315 VAVEDGVDRSVVTIRGDELFSSGSASIRDDFQPLLLRIAEAVAKVKGQVRITGHSDNQPI 374
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
S+ AL RA V AR A R P + AKNRR
Sbjct: 375 ATLRFPSNWALSRARAEEVLQILAARTGQAERFSAEGLSDTEPLASNATAEGRAKNRRVE 434
Query: 151 VFL 153
+ +
Sbjct: 435 ITV 437
>gi|307718975|ref|YP_003874507.1| hypothetical protein STHERM_c12930 [Spirochaeta thermophila DSM
6192]
gi|306532700|gb|ADN02234.1| hypothetical protein STHERM_c12930 [Spirochaeta thermophila DSM
6192]
Length = 395
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 55/134 (41%), Gaps = 2/134 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ ++ I E E+ + +++ F S + P + + L + L ++
Sbjct: 259 EEVEAAIEDLQIPDAEVETSEEGVTIRLENIQFPPDSALLLPEEQEKLRKIAQILSRYPE 318
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHD 139
L+EGH G+ +AL + RA AV ++ + ++ + YG P
Sbjct: 319 RDLLVEGHTALAGTPEGRLALSIERAKAVADFLMKLGVRRPEQIVIRGYGATRPIADNTT 378
Query: 140 EDAYAKNRRAIVFL 153
E+ ++NRR + +
Sbjct: 379 EEGRSRNRRVEITI 392
>gi|220935396|ref|YP_002514295.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein-like protein [Thioalkalivibrio sp.
HL-EbGR7]
gi|219996706|gb|ACL73308.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein-like protein [Thioalkalivibrio sp.
HL-EbGR7]
Length = 181
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 39/172 (22%), Positives = 74/172 (43%), Gaps = 22/172 (12%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG------------- 49
+ +IL ++ + +P T + + + ++
Sbjct: 4 MLRLAVILMLALVLGACARATKPGEEPAPGTDPSMRPVPDSGIEALPLDRDGMLGMDALS 63
Query: 50 --------DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIA 100
++F+ I+P +V+ G + + + EGH DE G+R ++
Sbjct: 64 DPASPLANRIIYFEFDRSDIKPEFEEVIIAHGRFLAQNPNMQVRAEGHTDERGTREYNLG 123
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
LG RRA AV + +G A +++V SYG+EMP +G DE+++A+NRR +
Sbjct: 124 LGERRAQAVQRMLMLQGARADQIQVVSYGEEMPVAFGRDEESWAQNRRVELV 175
>gi|254448733|ref|ZP_05062191.1| OmpA/MotB domain protein [gamma proteobacterium HTCC5015]
gi|198261741|gb|EDY86028.1| OmpA/MotB domain protein [gamma proteobacterium HTCC5015]
Length = 207
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 61/139 (43%), Gaps = 1/139 (0%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LE 77
SG + P+ +L S VFF S ++ VL +
Sbjct: 65 SGTETFALSDCEPECDYPREALDNPDSLLSKRMVFFAFDSDQVKEEFNDVLIAHAKYLAS 124
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
D +EGH DE G+R ++AL RRA AV + + G A + V +G+E+P G
Sbjct: 125 NPDVSVRLEGHTDERGTREYNLALSERRAKAVRQFLMLYGAPAESVNVYGFGEELPLALG 184
Query: 138 HDEDAYAKNRRAIVFLKGC 156
E+AYA+NRRA + G
Sbjct: 185 STEEAYAENRRAELVYDGN 203
>gi|108563489|ref|YP_627805.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
HPAG1]
gi|107837262|gb|ABF85131.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
HPAG1]
Length = 179
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 38/177 (21%), Positives = 75/177 (42%), Gaps = 24/177 (13%)
Query: 1 MQYSTIFIILSAITMMSISG-------------IDNLDTKISSPDTVLNESSLQEQFSSS 47
M+ S++F L A +++ + T + + + +++ +
Sbjct: 1 MKRSSVFSSLVAFLLVAGCSHKMDNKTVAGDVSAKTVQTAPVTTEPAPEKEEPKQEPAPV 60
Query: 48 VGDS-----------VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRN 96
V + ++FD Y I+ +D + L + +++ L+EG+ DE GS
Sbjct: 61 VEEKPAVESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEFGSSE 120
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ ALG++R +V N V +G+ +K S+G+ P + Y +NRR V L
Sbjct: 121 YNQALGVKRTLSVKNALVIKGVEKDMIKTISFGETKPKCTQKTRECYKENRRVDVKL 177
>gi|148653943|ref|YP_001281036.1| OmpA/MotB domain-containing protein [Psychrobacter sp. PRwf-1]
gi|148573027|gb|ABQ95086.1| OmpA/MotB domain protein [Psychrobacter sp. PRwf-1]
Length = 218
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHD 80
L +++ +N + + ++ F S +I + L L S + + D
Sbjct: 79 KQLKQQMAGTGVEVNRNPNTGNIDLVMPGNITFAHDSTNINGSFYNTLDKLASTMVQYGD 138
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ GH D +G+ + + L RRA AV +Y + RG+S++R++ YG+ P E
Sbjct: 139 TTVNVMGHTDSVGNPSYNQGLSERRAQAVASYLIQRGVSSNRIRTMGYGQNQPVASNSTE 198
Query: 141 DAYAKNRRAIVFL 153
+NRR + +
Sbjct: 199 SGRLQNRRVEIQI 211
>gi|38422322|emb|CAE45324.1| unnamed protein product [Magnetospirillum gryphiswaldense]
gi|144897900|emb|CAM74764.1| Outer membrane protein and related peptidoglycan-associated (lipo)
[Magnetospirillum gryphiswaldense MSR-1]
Length = 163
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 47/119 (39%), Positives = 67/119 (56%), Gaps = 1/119 (0%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
++ F ++VGD VFFD Y++R L +W + IEGHADE G+R
Sbjct: 44 VPGSEQDFIANVGDRVFFDFDKYALRADAKGSLDKQAAWLKKYPTYSLTIEGHADERGTR 103
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
++ALG RRA +V Y V G+ A+R+K SYGKE P G +E A+++NRR + L
Sbjct: 104 EYNLALGERRANSVKEYLVGAGVPAARVKTISYGKERPVALGSNEAAWSQNRRGVTVLS 162
>gi|119385600|ref|YP_916655.1| OmpA/MotB domain-containing protein [Paracoccus denitrificans
PD1222]
gi|119376195|gb|ABL70959.1| OmpA/MotB domain protein [Paracoccus denitrificans PD1222]
Length = 215
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 43/115 (37%), Gaps = 1/115 (0%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALG 102
S + +S F T S ++ L + + + I GH D GS + L
Sbjct: 101 LSVVMPESTLFATDSAAVGAQGQNDLYTIARNLTQYPNSRIQIVGHTDSTGSAAYNQDLS 160
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
RRA +V A G++ SR+ G P A+NRR + + R
Sbjct: 161 ERRARSVAGILTAGGVAQSRVTTLGRGATQPVASNDTAAGRAQNRRVEILITPTR 215
>gi|15836965|ref|NP_297653.1| hypothetical protein XF0363 [Xylella fastidiosa 9a5c]
gi|9105193|gb|AAF83173.1|AE003888_6 conserved hypothetical protein [Xylella fastidiosa 9a5c]
Length = 242
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 1/125 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGH 88
+ +T ++ + + ++ D + FD ++P L N+ S E + + G+
Sbjct: 104 TANTGIDVKRDGDNITLNLPDGITFDFGKSMLKPQFYGALKNVASTLREYNQTMIEVVGY 163
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D +GS + L RA AV +Y +G+ RM+++ GK P E +KNRR
Sbjct: 164 TDSIGSDVVNQRLSEDRAGAVASYLAGQGVQRERMEISGMGKRYPIADNSTEAGRSKNRR 223
Query: 149 AIVFL 153
+ L
Sbjct: 224 VEIHL 228
>gi|260772262|ref|ZP_05881178.1| outer membrane protein A precursor [Vibrio metschnikovii CIP 69.14]
gi|260611401|gb|EEX36604.1| outer membrane protein A precursor [Vibrio metschnikovii CIP 69.14]
Length = 327
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 45/115 (39%), Gaps = 1/115 (0%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSS 98
+ + + DS F S S+ Q L+ L + + +I GH D G +
Sbjct: 204 VNKTYDFQRLDSSSFAFDSVSLNQESKQQLTKLVRFLNQYPQAKVVITGHTDATGPAAYN 263
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L +RA AV + V +GI SR+ G+ P + NRR + +
Sbjct: 264 QTLSEKRAKAVADALVEQGIQRSRITWRGEGETNPIASNSTAEGRELNRRVDITI 318
>gi|237748606|ref|ZP_04579086.1| OmpA/MotB domain-containing protein [Oxalobacter formigenes OXCC13]
gi|229379968|gb|EEO30059.1| OmpA/MotB domain-containing protein [Oxalobacter formigenes OXCC13]
Length = 217
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 58/129 (44%), Gaps = 1/129 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FL 84
+ V + S+ V F T S ++ P +L +L + L+ +
Sbjct: 85 QAATQGTGVEVVQTENNMIRVSIPSDVSFATGSSTLSPQFKTILRDLATTLKNNPSSSIF 144
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+ G+ D GS + ++ L +RA +V Y V++G++A+R V G + P + A
Sbjct: 145 VVGYTDNTGSDSVNLPLSRKRAMSVMEYLVSQGVAANRFTVEGMGSKDPIASNATAEGRA 204
Query: 145 KNRRAIVFL 153
+NRR +++
Sbjct: 205 QNRRVEIYV 213
>gi|153871249|ref|ZP_02000470.1| outer membrane protein OprF [Beggiatoa sp. PS]
gi|152072284|gb|EDN69529.1| outer membrane protein OprF [Beggiatoa sp. PS]
Length = 188
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 5/144 (3%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD--SVFFDTSSYSIRPADIQVLSNL 72
M +IS + + L+ +SL +S ++ + V+F++ S I+ L
Sbjct: 42 MTNISKSTLISKSTLTLSKALSSNSLAPNYSGNIKEGIRVYFESDSTRIKAEFYPWLHQY 101
Query: 73 GSWLEKH--DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYG 129
L+ + I GH D +GS + L RRA AV N +++ + +R+ V YG
Sbjct: 102 AKTLQSELAETMIEIGGHTDNIGSDEYNKDLSQRRAQAVKNILLSKYKISANRLIVKGYG 161
Query: 130 KEMPSVYGHDEDAYAKNRRAIVFL 153
+ P + + A NRR + +
Sbjct: 162 ENQPLDVNENREGRAINRRVELKI 185
>gi|330502930|ref|YP_004379799.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
gi|328917216|gb|AEB58047.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
Length = 267
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 51/139 (36%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ + + L S + ++GD +F + A+ VL +
Sbjct: 123 SVQQHNGWLEEQMVSLATSETERGLVMTLGDMLFDAGRADLQPAANRTVLKLVQFLQINP 182
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
IEG+ D G ++ L RA AV + V G+ A R++V YG + P
Sbjct: 183 QRRVRIEGYTDNTGDAAENLELSRARAQAVADLLVDLGVDAKRIQVVGYGVDFPVAENAS 242
Query: 140 EDAYAKNRRAIVFLKGCRA 158
A+NRR + R
Sbjct: 243 ARGRAQNRRVEIVFSDERG 261
>gi|149188853|ref|ZP_01867143.1| Conserved hypothetical outer membrane protein [Vibrio shilonii AK1]
gi|148837273|gb|EDL54220.1| Conserved hypothetical outer membrane protein [Vibrio shilonii AK1]
Length = 217
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 51/108 (47%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
+ + F ++ P + L+ L L K + I+GH D G + ALGL+RA
Sbjct: 100 GLVARLHFGFDQANLTPMGDEALNRLADTLGKQASNITIDGHTDSTGPEGYNQALGLKRA 159
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ +++G+ + + V S+G+ P + A+NRR+ +++
Sbjct: 160 LTTSDGLISKGVDKNHIVVRSFGETKPIATNSTTEGRAQNRRSEIWVS 207
>gi|296410002|gb|ADH15777.1| OmpP6 [Haemophilus haemolyticus]
Length = 144
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 44/146 (30%), Positives = 71/146 (48%), Gaps = 3/146 (2%)
Query: 5 TIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPA 64
++ ++ ++ N D + S+ + ++V+F Y+I
Sbjct: 1 KSLLVAGSVAALAACSSSNNDAAGNGAGQTFGGYSVSD--LQQRYNTVYFGFDKYNIEGE 58
Query: 65 DIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
+Q+L + L+EG+ DE G+ +IALG RRA AV Y +G+ A ++
Sbjct: 59 YVQILDAHAAYLNATPAAKVLVEGNTDERGTPEYNIALGQRRADAVKGYLAGKGVDAGKL 118
Query: 124 KVTSYGKEMPSVYGHDEDAYAKNRRA 149
SYG+E P+V GHDE AY+KNRRA
Sbjct: 119 GTVSYGEEKPAVLGHDEAAYSKNRRA 144
>gi|162452747|ref|YP_001615114.1| outer membrane protein [Sorangium cellulosum 'So ce 56']
gi|161163329|emb|CAN94634.1| outer membrane protein [Sorangium cellulosum 'So ce 56']
Length = 386
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 53/142 (37%), Gaps = 10/142 (7%)
Query: 21 IDNLDTKISSPDTVLNESS---------LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+D D + P V + + + + + F+ IRP +L
Sbjct: 239 VDLEDQCPNEPGVVGGDKPGCPKKPSLVIVTEKEIKITQQIHFEFDKDKIRPESFPILDA 298
Query: 72 LGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
+ + I+GH D G+ + L RRA +V Y VA+GI +R+ YG
Sbjct: 299 VVDVLQQNPKIKIEIQGHTDNKGAAAYNKKLSDRRAASVKKYLVAKGIDEARLTSKGYGM 358
Query: 131 EMPSVYGHDEDAYAKNRRAIVF 152
E P V + A NRR
Sbjct: 359 EQPIVPNTSDQNRALNRRVQFV 380
>gi|90412130|ref|ZP_01220136.1| putative peptidoglycan-associated lipoprotein [Photobacterium
profundum 3TCK]
gi|90326854|gb|EAS43239.1| putative peptidoglycan-associated lipoprotein [Photobacterium
profundum 3TCK]
Length = 174
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 50/173 (28%), Positives = 74/173 (42%), Gaps = 21/173 (12%)
Query: 1 MQYSTIF----IILSAITMMSIS----------------GIDNLDTKISSPDTVLNESSL 40
MQ + I I L +T+ + S + T +
Sbjct: 1 MQLNKILKGLAIALPMMTLAACSSTDSTDSSAASETTDGSAQTVVTTPVDGGSAALSEQE 60
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSI 99
+V+F + I+ +L + D ++EGHADE G+ +I
Sbjct: 61 LRSQELRQEQTVYFKFDTAEIQADYQAMLEAHAEYLSNSSDVKVIVEGHADERGTPEYNI 120
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
ALG RRA AV Y A G+SAS++ + SYG+E P V GH + YAKNRRA++
Sbjct: 121 ALGERRANAVAQYLQALGVSASQISIVSYGEEKPLVLGHTDADYAKNRRAVLV 173
>gi|148262285|ref|YP_001228991.1| OmpA/MotB domain-containing protein [Geobacter uraniireducens Rf4]
gi|146395785|gb|ABQ24418.1| OmpA/MotB domain protein [Geobacter uraniireducens Rf4]
Length = 194
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 50/139 (35%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDS----VFFDTSSYSIRPADIQVLSNLGSW 75
+ + + T + E+S++EQ ++V + V+FD S+ + +LSN W
Sbjct: 54 TEEVVKEQPIKEATTIAEASIKEQPVTAVAATELGKVYFDFDSFVLTQTSRDILSNNAKW 113
Query: 76 L-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
L + IEGH DE GS ++ALG +RA + NY V G+ A ++ V SYGKE P+
Sbjct: 114 LLKTGRAKVQIEGHCDERGSDEYNLALGEKRAKSAMNYLVTLGVPADQLSVISYGKEKPA 173
Query: 135 VYGHDEDAYAKNRRAIVFL 153
GH+E A+AKNRRA +
Sbjct: 174 DPGHNEAAWAKNRRAEFVI 192
>gi|237707828|ref|ZP_04538309.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|229458156|gb|EEO63877.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
Length = 213
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 55/122 (45%), Gaps = 1/122 (0%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADE 91
+ + + +EQF ++ + F SY + ++LS+L + + E + I GH D
Sbjct: 87 SSYKDKNGKEQFKATAQSEILFKFDSYELNEEAQKMLSDLCNIITEIPNTKIKIIGHTDN 146
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+G + +I L RA AV NY GI + + G P E AKNRR +
Sbjct: 147 IGEKQYNIILSKNRAAAVGNYLRTAGIETNNITEDGKGYSEPIADNTSEAGRAKNRRVEI 206
Query: 152 FL 153
F+
Sbjct: 207 FI 208
>gi|254475683|ref|ZP_05089069.1| OmpA/MotB [Ruegeria sp. R11]
gi|214029926|gb|EEB70761.1| OmpA/MotB [Ruegeria sp. R11]
Length = 177
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 46/120 (38%), Positives = 62/120 (51%), Gaps = 1/120 (0%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
+ F VGD V F ++ A L W D IEGHADE G+R
Sbjct: 54 DPQSPAYFQQEVGDRVLFAVDQSTLSEAAKATLVGQARWLTSNPDYIVTIEGHADEQGTR 113
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
++ALG RRA A + +++G++ SR++V SYGKE P +E YAKNRRA+ L G
Sbjct: 114 EYNLALGARRANAAREFLISQGVAGSRLQVVSYGKERPLEICSNEACYAKNRRAVTVLAG 173
>gi|194290119|ref|YP_002006026.1| outer membrane protein, ompa family [Cupriavidus taiwanensis LMG
19424]
gi|193223954|emb|CAQ69963.1| putative outer membrane protein, ompA family [Cupriavidus
taiwanensis LMG 19424]
Length = 177
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 53/155 (34%), Gaps = 7/155 (4%)
Query: 7 FIILSAITMMSISGIDNLDTKISSPDTVLNESS------LQEQFSSSVGDSVFFDTSSYS 60
++ + ++++G + L E + + D V F +
Sbjct: 21 WLAAVMLAGLALAGCQTAPREGRLSPAQLAVLQQEGFTLTGEGWELGLTDKVLFGFNEDL 80
Query: 61 IRPA-DIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
I VL + ++GH D+ GS + +L +RRA AV G +
Sbjct: 81 IEGDRAANVLRIGRALSGVGIERLRVDGHTDDAGSAEYNQSLSVRRAEAVARLLADAGFT 140
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
++V GK P A+NRR + +
Sbjct: 141 RDNIEVRGLGKSRPVADNRTAAGRAENRRVAIIVS 175
>gi|45656490|ref|YP_000576.1| peptidoglycan-associated cytoplasmic membrane protein [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
gi|45599725|gb|AAS69213.1| peptidoglycan-associated cytoplasmic membrane protein [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
Length = 475
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 53/134 (39%), Gaps = 3/134 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ D + + + + +E + S+ +SV FD +S ++ L + S L+K+
Sbjct: 340 EEEDNQAAPEGSPVEIRRTEEGIAISL-NSVLFDHNSSELKQEAKLELKRIASVLKKYAD 398
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFV-ARGISASRMKVTSYGKEMPSVYGHD 139
I GH D G + L RA +V +G+ RM YGK P
Sbjct: 399 REIRISGHTDNSGGEEYNRKLSRERALSVLKELRDEQGLEEKRMSYEGYGKSKPIADNST 458
Query: 140 EDAYAKNRRAIVFL 153
KNRR + +
Sbjct: 459 IQGRQKNRRVDITI 472
>gi|332668433|ref|YP_004451221.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332337247|gb|AEE54348.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 501
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 59/138 (42%), Gaps = 6/138 (4%)
Query: 22 DNLDTKISSPDTVLNE-----SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
D+ D + P N + + + +V F+T S ++ +L + L
Sbjct: 361 DSADKCPNQPGPASNNGCPEIAQKDRETLTFAARNVQFETGSAVLKNTSNTILDQVVDIL 420
Query: 77 EKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+++ D + + GH D +GS ++ L RA A +Y V++GI A+R+ +G+ P
Sbjct: 421 KRYSDYNVRVSGHTDNVGSDELNLKLSKARAKACTDYLVSKGIPANRIVFDGFGESRPVA 480
Query: 136 YGHDEDAYAKNRRAIVFL 153
+NRR L
Sbjct: 481 NNATPQGRTQNRRTEFEL 498
>gi|253572950|ref|ZP_04850347.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|254885124|ref|ZP_05257834.1| lipoprotein PG3 [Bacteroides sp. 4_3_47FAA]
gi|251837477|gb|EES65571.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|254837917|gb|EET18226.1| lipoprotein PG3 [Bacteroides sp. 4_3_47FAA]
Length = 213
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 1/122 (0%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADE 91
+ + + +EQF ++ + F SY + ++LSNL + + E + I GH D
Sbjct: 87 SSYKDKNGKEQFKATAQSEILFKFDSYELNEEAQKMLSNLCNIITEIPNTKIKIIGHTDN 146
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+G + +I L RA AV NY GI + + G P E AKNRR +
Sbjct: 147 IGEKQYNIILSKNRAAAVGNYLRTAGIETNNITEDGKGYSEPIADNTSEAGRAKNRRVEI 206
Query: 152 FL 153
F+
Sbjct: 207 FI 208
>gi|269963139|ref|ZP_06177474.1| peptidoglycan-associated lipoprotein [Vibrio harveyi 1DA3]
gi|269832103|gb|EEZ86227.1| peptidoglycan-associated lipoprotein [Vibrio harveyi 1DA3]
Length = 173
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 53/173 (30%), Positives = 84/173 (48%), Gaps = 22/173 (12%)
Query: 1 MQYST----IFIILSAITMMSISGIDNLDT----------------KISSPDTVLNESSL 40
MQ + + I + + M + S D+ + P++ L E L
Sbjct: 1 MQLNKVLKGLLIAIPVMAMTACSSSDDAASNTGAETNTGAAETTVVTPIDPNSQLTEQEL 60
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSI 99
+EQ + +++F + +I ++L+ S+ + IEGHADE G+ +I
Sbjct: 61 KEQ-ALRETQTIYFAFDNSTIAGDYEEMLAAHASYLSKNPALKVTIEGHADERGTPEYNI 119
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
ALG RRA AV NY A G+ A ++ + SYG+E P + G ED YAKNRRA++
Sbjct: 120 ALGERRAEAVSNYLQALGVQADQISIVSYGEEKPLLLGQSEDVYAKNRRAVLV 172
>gi|254465245|ref|ZP_05078656.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
gi|206686153|gb|EDZ46635.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
Length = 219
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/149 (20%), Positives = 62/149 (41%), Gaps = 3/149 (2%)
Query: 8 IILSAITMMSISGIDNLDTKISS--PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPAD 65
++ +A + + +D + ++ + + + ++ S + + F T S ++ PA
Sbjct: 66 LVGAAAGSVIGNQLDAQERELRQTLANDSITIVNTGDRLILSFPNDLTFATDSAAVAPAV 125
Query: 66 IQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
L + + + + GH D G + L RRA AV ++ A G+ RM+
Sbjct: 126 QADLRRVADSLVRYPNSAIQVIGHTDSDGDAGYNQGLSERRANAVASHIQAGGVPYHRMR 185
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ G+ P + A+NRR V +
Sbjct: 186 IIGRGESQPVASNLTPEGKARNRRVEVVV 214
>gi|262039107|ref|ZP_06012440.1| inner membrane lipoprotein YiaD [Leptotrichia goodfellowii F0264]
gi|261746896|gb|EEY34402.1| inner membrane lipoprotein YiaD [Leptotrichia goodfellowii F0264]
Length = 164
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGH 88
V E + + + + +++ FDT+S I+ L+++ + D + ++ GH
Sbjct: 37 DGSGVKVERTGEGEIKLTAPENITFDTNSSVIKSRFTGSLNSVADVLKKYPDSNIIVSGH 96
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D G+ + + L + RA +V +Y V G+ +SR+ YG + P + A+NRR
Sbjct: 97 TDSTGNDSINNPLSVNRAASVKSYLVGAGVPSSRITSVGYGSKEPIASNSTANGRAQNRR 156
Query: 149 AIVFL 153
+ +
Sbjct: 157 VEIKI 161
>gi|167623623|ref|YP_001673917.1| peptidoglycan-associated lipoprotein [Shewanella halifaxensis
HAW-EB4]
gi|167353645|gb|ABZ76258.1| Peptidoglycan-associated lipoprotein [Shewanella halifaxensis
HAW-EB4]
Length = 179
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 22/172 (12%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKI---------------------SSPDTVLNESSLQ 41
+ + ++L + + + S +T +P E
Sbjct: 7 FKAMLVVLPIMAISACSSTSESETDATSSTESSSSSEYANNGVETGGVAPVLTPEEQQRL 66
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIA 100
+ ++FD S+ +VLS G + +E + +IEGHADE G+ +IA
Sbjct: 67 KYQELRKEHIIYFDFDRSSVSQQFAEVLSAHGDYLVEHPNVRVMIEGHADERGTPEYNIA 126
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
LG RRA AV Y G+ S+M V SYG+E P + ++ +AKNRRA++
Sbjct: 127 LGERRAKAVAKYLQGMGVQPSQMSVVSYGEEKPMDFTRSDEGFAKNRRAVLV 178
>gi|319764890|ref|YP_004128827.1| ompa/motb domain protein [Alicycliphilus denitrificans BC]
gi|330827094|ref|YP_004390397.1| OmpA/MotB domain-containing protein [Alicycliphilus denitrificans
K601]
gi|317119451|gb|ADV01940.1| OmpA/MotB domain protein [Alicycliphilus denitrificans BC]
gi|329312466|gb|AEB86881.1| OmpA/MotB domain protein [Alicycliphilus denitrificans K601]
Length = 214
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 52/133 (39%), Gaps = 2/133 (1%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFL 84
+ V + Q + + F T+ I+P+ +L + +
Sbjct: 81 QAATQGTGVTVTQTADNQLKLDIPSDISFATNRSDIQPSFRPILDRFAEGLRNNPNAEVR 140
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
I GH D G+ + L L RA + NY ARG+S +R+ V G P + A
Sbjct: 141 IIGHTDSTGNDAINDPLSLDRATSTRNYLTARGVSGARIHVDGRGSREPIASNDTAEGRA 200
Query: 145 KNRRAIVFLKGCR 157
+NRR +F G R
Sbjct: 201 RNRRVEIF-MGER 212
>gi|298504468|gb|ADI83191.1| OmpA family outer membrane protein [Geobacter sulfurreducens KN400]
Length = 429
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 5/135 (3%)
Query: 22 DNLDTKISSPDT-VLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
D LD +P ++ E+ ++G V FDT ++P + +L+++
Sbjct: 290 DYLDKCPDTPKDLAVDAKGCPERICITLG--VQFDTDKAVVKPQYNDEIKKAADFLKEYP 347
Query: 81 -CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGH 138
+IEGH D +GS + L RRA AV Y V + ISA R+ +G+ P
Sbjct: 348 DATAVIEGHTDSVGSDAYNQKLSERRAKAVMKYLVDKFGISAKRLSAKGFGESKPIADNA 407
Query: 139 DEDAYAKNRRAIVFL 153
E+ KNRR + +
Sbjct: 408 TEEGRYKNRRVVAVI 422
>gi|298372337|ref|ZP_06982327.1| OmpA domain protein [Bacteroidetes oral taxon 274 str. F0058]
gi|298275241|gb|EFI16792.1| OmpA domain protein [Bacteroidetes oral taxon 274 str. F0058]
Length = 700
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 1/109 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLR 104
+ FDT +I+P VL + + + + +I GH D G+ ++ L +
Sbjct: 583 KQALHGIQFDTGKATIKPVSRGVLKLIVDIMRNNPDYNLIIAGHTDSQGNDALNMTLSEK 642
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA AV Y RGI R++ YG+ +P A+NRR +
Sbjct: 643 RAAAVRKYLEDRGIDKRRLQSKGYGETLPVATNKTAKGRAQNRRVEFTV 691
>gi|39995468|ref|NP_951419.1| OmpA domain-containing protein [Geobacter sulfurreducens PCA]
gi|39982231|gb|AAR33692.1| OmpA domain protein [Geobacter sulfurreducens PCA]
Length = 429
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 5/135 (3%)
Query: 22 DNLDTKISSPDT-VLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
D LD +P ++ E+ ++G V FDT ++P + +L+++
Sbjct: 290 DYLDKCPDTPKDLAVDAKGCPERICITLG--VQFDTDKAVVKPQYNDEIKKAADFLKEYP 347
Query: 81 -CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGH 138
+IEGH D +GS + L RRA AV Y V + ISA R+ +G+ P
Sbjct: 348 DATAVIEGHTDSVGSDAYNQKLSERRAKAVMKYLVDKFGISAKRLSAKGFGESKPIADNA 407
Query: 139 DEDAYAKNRRAIVFL 153
E+ KNRR + +
Sbjct: 408 TEEGRYKNRRVVAVI 422
>gi|254255311|ref|ZP_04948627.1| Outer membrane protein [Burkholderia dolosa AUO158]
gi|124901048|gb|EAY71798.1| Outer membrane protein [Burkholderia dolosa AUO158]
Length = 232
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 42/110 (38%), Gaps = 1/110 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLR 104
++ FDT +++P L L I G+ D G+ + L R
Sbjct: 123 ITLDSDANFDTDRATLKPDARDRLDVLIDAARGTTFQTVAIAGYTDSTGTAEHNQRLSER 182
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RA AV Y G+ A + V YG+ P AKNRR + L+
Sbjct: 183 RAQAVAQYLREHGLRAQKFDVRGYGESNPVATNTTAAGRAKNRRVDITLE 232
>gi|238786643|ref|ZP_04630444.1| Outer membrane protein and peptidoglycan-associated (lipo)protein
[Yersinia frederiksenii ATCC 33641]
gi|238725011|gb|EEQ16650.1| Outer membrane protein and peptidoglycan-associated (lipo)protein
[Yersinia frederiksenii ATCC 33641]
Length = 168
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 58/157 (36%), Gaps = 5/157 (3%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESS----LQEQFSSSVGDSVFFDTS 57
Q + I++ AI ++ ++G ++ + + + + V FD+
Sbjct: 9 QRNPIWLSFFAICLLVLTGCQAKPQGLTPEQIAALQEQGFKLTDNGWEFGLTNKVLFDSD 68
Query: 58 SYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
+ + Q + N+G ++GH D G + + L RA AV +
Sbjct: 69 VRKLNSSGTQTVQNIGQALHNVGINHLRVDGHTDATGEDSYNQKLSYERAAAVADSLATI 128
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
GI + + V GK P A+NRR + +
Sbjct: 129 GIPRTNIDVRGRGKLEPVADNRSAKGRAENRRVAMIV 165
>gi|189464066|ref|ZP_03012851.1| hypothetical protein BACINT_00401 [Bacteroides intestinalis DSM
17393]
gi|198275155|ref|ZP_03207686.1| hypothetical protein BACPLE_01313 [Bacteroides plebeius DSM 17135]
gi|298482396|ref|ZP_07000582.1| outer membrane protein [Bacteroides sp. D22]
gi|189438400|gb|EDV07385.1| hypothetical protein BACINT_00401 [Bacteroides intestinalis DSM
17393]
gi|198271975|gb|EDY96245.1| hypothetical protein BACPLE_01313 [Bacteroides plebeius DSM 17135]
gi|298271375|gb|EFI12950.1| outer membrane protein [Bacteroides sp. D22]
Length = 213
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 55/122 (45%), Gaps = 1/122 (0%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADE 91
+ + + +EQF ++ + F SY + ++LS+L + + E + I GH D
Sbjct: 87 SSYKDKNGKEQFKATAQSEILFKFDSYELNEEAQKMLSDLCNIISEIPNTKIKIIGHTDN 146
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+G + +I L RA AV NY GI + + G P E AKNRR +
Sbjct: 147 IGEKQYNIILSKNRAAAVGNYLRTAGIETNNITEDGKGYSEPIADNTSEAGRAKNRRVEI 206
Query: 152 FL 153
F+
Sbjct: 207 FI 208
>gi|60650175|ref|YP_209728.1| putative outer membrane protein [Bacteroides fragilis NCTC 9343]
gi|255010962|ref|ZP_05283088.1| putative outer membrane protein [Bacteroides fragilis 3_1_12]
gi|313148766|ref|ZP_07810959.1| lipoprotein [Bacteroides fragilis 3_1_12]
gi|317477470|ref|ZP_07936697.1| OmpA family protein [Bacteroides eggerthii 1_2_48FAA]
gi|60495255|emb|CAH05749.1| putative outer membrane protein [Bacteroides fragilis NCTC 9343]
gi|313137533|gb|EFR54893.1| lipoprotein [Bacteroides fragilis 3_1_12]
gi|316906390|gb|EFV28117.1| OmpA family protein [Bacteroides eggerthii 1_2_48FAA]
Length = 213
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 55/122 (45%), Gaps = 1/122 (0%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADE 91
+ + + +EQF ++ + F SY + ++LS+L + + E + I GH D
Sbjct: 87 SSYKDKNGKEQFKATAQSEILFKFDSYELNEEAQKMLSDLCNIITEIPNTKIKIIGHTDN 146
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+G + +I L RA AV NY GI + + G P E AKNRR +
Sbjct: 147 IGEKQYNIILSKNRAAAVGNYLRTAGIETNNITEDGKGYSEPIADNTSEAGRAKNRRVEI 206
Query: 152 FL 153
F+
Sbjct: 207 FI 208
>gi|325982315|ref|YP_004294717.1| OmpA/MotB domain-containing protein [Nitrosomonas sp. AL212]
gi|325531834|gb|ADZ26555.1| OmpA/MotB domain protein [Nitrosomonas sp. AL212]
Length = 277
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 50/125 (40%), Gaps = 2/125 (1%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELG 93
LN + ++ D V F T+ + ++ + L + + LIEGH D G
Sbjct: 148 LNAKKTERGLVITLND-VLFRTNMAQLEANGVRTVQKLADFLRQYTQHKVLIEGHTDNTG 206
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + L RRA AV + GIS R+ YG+ +P + NRR + L
Sbjct: 207 SHHYNQELSERRANAVKMALLNSGISNDRVASRGYGETLPIAGNDTAEHRQLNRRVEIIL 266
Query: 154 KGCRA 158
Sbjct: 267 SDENG 271
>gi|240948556|ref|ZP_04752929.1| outer membrane protein precursor PalA [Actinobacillus minor NM305]
gi|240297064|gb|EER47635.1| outer membrane protein precursor PalA [Actinobacillus minor NM305]
Length = 156
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 47/156 (30%), Positives = 76/156 (48%), Gaps = 7/156 (4%)
Query: 1 MQYSTIFIILSA-ITMMSISGIDNLDTKISSPDTVLNESSL----QEQFSSSVGDSVFFD 55
M+ ++++A +++ + ++ +S Q + ++V+F
Sbjct: 1 MKKLAKVLMVAAPAFVLAACSSSTDNAAANANANAAADSQTFGGISAQDLQTRYNTVYFA 60
Query: 56 TSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA 115
SY+I Q+L L + + GHADE G+ +IALG RRA AV NY
Sbjct: 61 FDSYAIEGEYRQLLDAHAQLLNATKANVTVAGHADERGTPEYNIALGQRRANAVQNYLAQ 120
Query: 116 RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+G A+ + SYG+E P+V GH E YAKNRRA++
Sbjct: 121 QG--ATNVSTVSYGEEKPAVLGHTEADYAKNRRAVL 154
>gi|138896104|ref|YP_001126557.1| flagellar motor protein MotB [Geobacillus thermodenitrificans
NG80-2]
gi|134267617|gb|ABO67812.1| Chemotaxis MotB protein [Geobacillus thermodenitrificans NG80-2]
Length = 260
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 46/128 (35%), Gaps = 6/128 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
L S +E + ++ D + FD+ S +R D ++ S + + + + +I GH D
Sbjct: 119 GGKLQTSLTEEGLAITILDDILFDSGSAEVRMKDRRLASEVAALLVMNPPRNVIISGHTD 178
Query: 91 ELGSRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ N+ A R + + + YG+ P K
Sbjct: 179 NVPIHNAQFASNWELSVMRAVNFMKVLLENKQLDPRYFSAKGYGEYKPIASNETAAGRMK 238
Query: 146 NRRAIVFL 153
NRR + +
Sbjct: 239 NRRVEILI 246
>gi|306820525|ref|ZP_07454158.1| outer membrane porin F [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304551439|gb|EFM39397.1| outer membrane porin F [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 437
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 47/122 (38%), Gaps = 2/122 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADE 91
+ V FD + Y+IR VL L L+K F I GH D
Sbjct: 314 VPAVPPIEANSIMIKLDSGVLFDVNKYNIRADANDVLMKLIDVLKKGKIQKFEIYGHTDS 373
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ + L RA +V ++ V GI+A + +G++ P ++ NRR +
Sbjct: 374 DDTDEYNQVLSENRANSVKDFLVKNGITAD-ITTKGFGEKKPIATNSTKEGKQLNRRVEI 432
Query: 152 FL 153
+
Sbjct: 433 II 434
>gi|222053743|ref|YP_002536105.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
gi|221563032|gb|ACM19004.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
Length = 258
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 53/130 (40%), Gaps = 5/130 (3%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGH 88
+ ++ + S+ ++ FFD+ S ++ + +L+++ L + +EGH
Sbjct: 119 TGAQDKVSVEINRRGLVVSLKEAGFFDSGSAIVQQSAYSLLAHVAESLVNYTNPVRVEGH 178
Query: 89 ADELG----SRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVYGHDEDAY 143
D + + S+ L RA + Y + ++ T +G+ P D
Sbjct: 179 TDNVPINSRTFPSNWELSTARATNLVQYLIKYYEFEPEKISATGFGEYRPVADNTTVDGR 238
Query: 144 AKNRRAIVFL 153
+KNRR + L
Sbjct: 239 SKNRRVDIVL 248
>gi|188534419|ref|YP_001908216.1| peptidoglycan-associated outer membrane lipoprotein [Erwinia
tasmaniensis Et1/99]
gi|188029461|emb|CAO97338.1| Peptidoglycan-associated lipoprotein Pal, OmpA family of porins
[Erwinia tasmaniensis Et1/99]
Length = 172
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 51/171 (29%), Positives = 82/171 (47%), Gaps = 19/171 (11%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKIS--------------SPDTVLNESSLQE 42
MQ + + + L I + + S N + + S + +E + +
Sbjct: 1 MQLNKVLKGLMLALPVIAVAACSSHKNNNNDQTNGMGLDGSANGGMNSGNMSSDEQARLQ 60
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIAL 101
+ V+F Y I+ Q+L ++L + +EGHADE G+ +IAL
Sbjct: 61 MQELQKNNIVYFGLDKYDIQSDFAQMLDAHATFLRSNPSYKVTVEGHADERGTPEYNIAL 120
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
G RR+ AV Y +G++ ++ + SYGKE P+V GHDE AYAKNRRA++
Sbjct: 121 GERRSSAVKMYLQGKGVAEDQISIVSYGKEKPAVLGHDESAYAKNRRAVLV 171
>gi|171321509|ref|ZP_02910450.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria MEX-5]
gi|171093217|gb|EDT38424.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria MEX-5]
Length = 169
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 14/166 (8%)
Query: 1 MQYSTIFIILSAITMMSISGI-------DNLDTKISSPDTV------LNESSLQEQFSSS 47
M + + L+ + + +++ D + S +N L + S
Sbjct: 1 MMSNKARLALAVLMISALAACKSGVKLDDKANAGAVSTQPSADNVAQVNVDPLNDPNSPL 60
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRA 106
S++FD SYS++ ++ +L+ H LI+G+ DE G+ ++ALG +RA
Sbjct: 61 AKRSIYFDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNTDERGTSEYNLALGQKRA 120
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
AV G++ S+M+ S GKE P GHDE ++A+NRRA +
Sbjct: 121 EAVRRAMALLGVNDSQMEAVSLGKEKPQASGHDEASWAQNRRADLV 166
>gi|153006608|ref|YP_001380933.1| OmpA/MotB domain-containing protein [Anaeromyxobacter sp. Fw109-5]
gi|152030181|gb|ABS27949.1| OmpA/MotB domain protein [Anaeromyxobacter sp. Fw109-5]
Length = 440
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLR 104
+ V F T+ + + P +L+ + L IEGH D +G ++ L +
Sbjct: 328 IDIKQQVHFATAKFRVLPDSFPLLNQVVQVLRDFPNMQISIEGHTDSVGGEALNMRLSQQ 387
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA AV +Y +++G+S R++ +G P A+NRR +
Sbjct: 388 RAEAVLDYLISKGVSPERLEAIGFGPTKPIASNKTASGRARNRRTEFRI 436
>gi|50084108|ref|YP_045618.1| putative outer membrane protein [Acinetobacter sp. ADP1]
gi|49530084|emb|CAG67796.1| putative outer membrane protein [Acinetobacter sp. ADP1]
Length = 217
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 61/146 (41%), Gaps = 1/146 (0%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
IL + + + + + + V + + ++ FDT+ +I+P
Sbjct: 68 ILGGASGLYLDQKEKKLRQQMAGTGVEVNRNPDGSVGLVMPGNITFDTNKSNIKPNFYST 127
Query: 69 LSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
L+ + L + + L+ G+ D G+ + +I L RA +V NY +G+S+SR+
Sbjct: 128 LNKVAQTLAEDNKSAILVTGYTDNTGNDSINIPLSQARAQSVANYLSGQGVSSSRINAQG 187
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFL 153
YG P +NRR + +
Sbjct: 188 YGSSNPIASNATAQGREQNRRVEISI 213
>gi|330875706|gb|EGH09855.1| ompA family protein [Pseudomonas syringae pv. morsprunorum str.
M302280PT]
gi|330967020|gb|EGH67280.1| ompA family protein [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 271
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 29/145 (20%), Positives = 58/145 (40%), Gaps = 2/145 (1%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
++ + L + ++GD V FD ++ + + + + +
Sbjct: 123 AKLASAQQQGRWLEDQILSLATTQTDRGLVMTLGD-VLFDAGHAELKSSASRTILKVVQF 181
Query: 76 LEKHDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
L+ + + IEG+ D G R ++ L RA AV + G+ R++V YG++ P
Sbjct: 182 LQINPRRVVRIEGYTDSTGDREENLTLSKDRAQAVADVLTDLGVDEKRIQVEGYGQQFPV 241
Query: 135 VYGHDEDAYAKNRRAIVFLKGCRAN 159
E A+NRR + + +
Sbjct: 242 DANASERGRAQNRRVEIVFSDEKGH 266
>gi|296410004|gb|ADH15778.1| OmpP6 [Haemophilus influenzae]
Length = 141
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 3/143 (2%)
Query: 7 FIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADI 66
++ ++ ++ N D + S+ + ++V+F Y I +
Sbjct: 1 LLVAGSVAALAACSSSNNDAAGNGAGQTFGGYSVAD--LQQRYNTVYFGFDKYDITGEYV 58
Query: 67 QVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
Q+L + L+EG+ DE G+ +IALG RRA AV Y +G+ A ++
Sbjct: 59 QILDAHAAYLNATPAAKVLVEGNTDERGTPEYNIALGQRRADAVKGYLAGKGVDAGKLGT 118
Query: 126 TSYGKEMPSVYGHDEDAYAKNRR 148
SYG+E P+V GHDE AY+KNRR
Sbjct: 119 VSYGEEKPAVLGHDEAAYSKNRR 141
>gi|260552490|ref|ZP_05825866.1| inner membrane lipoprotein yiaD [Acinetobacter sp. RUH2624]
gi|260405297|gb|EEW98793.1| inner membrane lipoprotein yiaD [Acinetobacter sp. RUH2624]
Length = 217
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 59/146 (40%), Gaps = 1/146 (0%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
+L A + + + + + V + + S+ FDT+ +I+P
Sbjct: 68 VLGAAGGLYLDQKEKKLREQMAGTGVEVGRNPDGSVQLIMPGSITFDTNKSNIKPNFYAT 127
Query: 69 LSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
L + L + + L+ G+ D G+ + +I L RA +V Y +G+S+SR+
Sbjct: 128 LDKVAQTLAEDNKSAILVTGYTDNTGNDSINIPLSQARAQSVKIYLAGKGVSSSRIDAQG 187
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFL 153
YG P +NRR + +
Sbjct: 188 YGSSNPIADNSTASGREQNRRVEISI 213
>gi|323496601|ref|ZP_08101654.1| peptidoglycan-associated lipoprotein [Vibrio sinaloensis DSM 21326]
gi|323318347|gb|EGA71305.1| peptidoglycan-associated lipoprotein [Vibrio sinaloensis DSM 21326]
Length = 175
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 18/168 (10%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISSPDTVLNES-----------------SLQEQFS 45
+ I L + + + S D+ S +T +++ ++ +
Sbjct: 7 LKGLLIALPVLAITACSSSDDAANASGSTETNQSQTAEGTVVSPIDQNGLLTEQELKEQA 66
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLR 104
+++F + +I ++L+ + + IEGHADE G+ +IALG R
Sbjct: 67 LRETQTIYFAFDNATIAGDYEEMLAAHAAYLSKNPALKVTIEGHADERGTPEYNIALGER 126
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
RA AV Y A G+ A ++ + SYG+E P + G DED YAKNRRA++
Sbjct: 127 RATAVAKYLQALGVQADQISIVSYGEEKPLLLGQDEDVYAKNRRAVLV 174
>gi|300715890|ref|YP_003740693.1| peptidoglycan-associated lipoprotein Pal, OmpA family of porins
[Erwinia billingiae Eb661]
gi|299061726|emb|CAX58842.1| Peptidoglycan-associated lipoprotein Pal, OmpA family of porins
[Erwinia billingiae Eb661]
Length = 172
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 54/171 (31%), Positives = 85/171 (49%), Gaps = 19/171 (11%)
Query: 1 MQYSTIF----IILSAITMMSISGI--------------DNLDTKISSPDTVLNESSLQE 42
MQ + + + L I + + S N ++ ++S + +E + +
Sbjct: 1 MQLNKVLKGLMLALPVIAVAACSSHKNNNNDQTNGMGDGANANSGMNSGNMSSDEQARLQ 60
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIAL 101
+ V+F Y I+ Q+L ++L + +EGHADE G+ +IAL
Sbjct: 61 MQELQKNNIVYFGLDKYDIQSEFAQMLDAHANFLRSNPSYKVTVEGHADERGTPEYNIAL 120
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
G RRA AV Y +G+SA ++ + SYGKE P+V GHDE AYAKNRRA++
Sbjct: 121 GERRATAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDESAYAKNRRAVLV 171
>gi|241759693|ref|ZP_04757793.1| inner membrane lipoprotein YiaD [Neisseria flavescens SK114]
gi|241319701|gb|EER56097.1| inner membrane lipoprotein YiaD [Neisseria flavescens SK114]
Length = 226
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHA 89
+T + Q + ++V F T S ++ LS ++ D I GH
Sbjct: 89 ANTNIEVERQGNQIKLVMPENVTFATGSAALSGQAQSALSVAAQTLVQYPDTTLTINGHT 148
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G+ + L RA +V + +RG+S++R+ YG P + A+NRR
Sbjct: 149 DNTGNDAINEPLSRNRAESVAIFLQSRGVSSTRLSTFGYGSRQPIASNATVEGRAQNRRV 208
Query: 150 IVFL 153
+ +
Sbjct: 209 EILI 212
>gi|118419991|gb|ABK88265.1| outer membrane protein CD [Moraxella catarrhalis]
Length = 427
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 49/149 (32%), Gaps = 9/149 (6%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+ G + P + +L E+ + VFFD I+P + ++ + + +
Sbjct: 273 ACPGTPV--NTVVDPRGCPVQVNLVEELRQEL--RVFFDYDKSIIKPQYREEVAKVAAQM 328
Query: 77 EKHD---CDFLIEGHADE-LGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKE 131
+ D S + L RA AV + +R+ YG +
Sbjct: 329 REFPNATATIEGHASRDSARSSARYNQRLSEARANAVKSMLSNEFGIAPNRLNAVGYGFD 388
Query: 132 MPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
P + A NRR + G + T
Sbjct: 389 RPIAPNTTAEGKAMNRRVEAVITGSKTTT 417
>gi|30314422|gb|AAP15420.1| outer membrane lipoprotein precursor [Burkholderia multivorans]
gi|30314432|gb|AAP15425.1| outer membrane lipoprotein precursor [Burkholderia cepacia]
Length = 149
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 44/136 (32%), Positives = 72/136 (52%), Gaps = 2/136 (1%)
Query: 19 SGIDNLDTKISSPDTV-LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
+ + T+ S+ + +N L + S S++FD SYS++ +L +L+
Sbjct: 11 ANAGAVSTQPSADNVAQVNVDPLNDPNSPLAKRSIYFDFDSYSVKDEYQPLLQQHAQYLK 70
Query: 78 KHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
H LI+G+ DE G+ ++ALG +RA AV G++ S+M+ S GKE P
Sbjct: 71 SHPQRHVLIQGNTDERGTSEYNLALGQKRAEAVRRALALLGVADSQMEAVSLGKEKPLAT 130
Query: 137 GHDEDAYAKNRRAIVF 152
GHDE ++A+NRRA +
Sbjct: 131 GHDEASWAQNRRADLV 146
>gi|307822441|ref|ZP_07652673.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
gi|307737007|gb|EFO07852.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
Length = 363
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 40/102 (39%), Gaps = 3/102 (2%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYAVF 110
F +S + ++L + L + ++GH G+ ++ L RRA +V
Sbjct: 259 HFKYNSAELTLNAKEILDGVAGNLVSYPQKNDIEVQGHTSSEGTNKYNLKLSQRRAQSVV 318
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+Y +R+ YG+ P E A+NRR +
Sbjct: 319 DYL-KLKGVTNRLTAKGYGETQPIADNSTEAGKAENRRVELI 359
>gi|255020134|ref|ZP_05292204.1| peptidoglycan-associated outer membrane lipoprotein
[Acidithiobacillus caldus ATCC 51756]
gi|254970427|gb|EET27919.1| peptidoglycan-associated outer membrane lipoprotein
[Acidithiobacillus caldus ATCC 51756]
Length = 193
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 42/188 (22%), Positives = 76/188 (40%), Gaps = 33/188 (17%)
Query: 1 MQYSTIFIILSAITMMSISGIDN----LDTKISSPDTVLNESSLQEQFSSSVGD------ 50
M + + L+A +++++G + K + P ++ + +G
Sbjct: 1 MDRKYMLVALTAAGILALAGCASNVGSGAPKAAGPVAPAESANTAAYNGAGIGSQQLDAN 60
Query: 51 ----------------------SVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEG 87
V F +S S+ ++ S + +EG
Sbjct: 61 GPIGGANSGLTAAELAALPQHLRVHFGFNSDSLDARAQEIASQNAQFMMNHAHVKVRLEG 120
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+ D+ G++ ++ALG RRA AV Y A+G+SA+R+ S+GK+ P +DE +AKNR
Sbjct: 121 NTDDRGTQEYNLALGERRAEAVKRYLEAQGVSAARISTVSFGKDNPLCNQNDESCWAKNR 180
Query: 148 RAIVFLKG 155
R G
Sbjct: 181 RVDFVYSG 188
>gi|24374288|ref|NP_718331.1| peptidoglycan-associated lipoprotein [Shewanella oneidensis MR-1]
gi|24348826|gb|AAN55775.1|AE015714_2 peptidoglycan-associated lipoprotein [Shewanella oneidensis MR-1]
Length = 177
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 24/176 (13%)
Query: 1 MQYSTIF-IILSAITMMSISGIDNLDTKISSPDTVLNESSLQ------------------ 41
M + + +L A+ +M+IS + + + S +
Sbjct: 1 MDLNKLLKAMLVALPIMAISACSSTSESETDAMGSTSGSGSELNGGVQTGGIGGMLSPEE 60
Query: 42 ----EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRN 96
E ++FD ++ VL G++ +E LIEGHADE G+
Sbjct: 61 QQRQELEQLRKEHIIYFDFDRSEVQTEYAAVLEAHGTYLVEHPSVRVLIEGHADERGTPE 120
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+IALG RRA AV Y G+ S+M + SYG+E P + ++ +AKNRRA++
Sbjct: 121 YNIALGERRAKAVAKYLQGMGVQPSQMSIVSYGEEKPLDFTRTDEGFAKNRRAVLV 176
>gi|85858730|ref|YP_460932.1| outer membrane porin protein [Syntrophus aciditrophicus SB]
gi|85721821|gb|ABC76764.1| outer membrane porin protein [Syntrophus aciditrophicus SB]
Length = 435
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 53/134 (39%), Gaps = 5/134 (3%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-K 78
G ++ K P + + + + F + Y+I P + + +++
Sbjct: 302 GCPPVEEKRPEPAAAVEPKAEAPVMMTL---HILFASDKYNIEPKYDSEIQKVADYMKAN 358
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYG 137
D ++ GH D S + L RA AV V + I ASR++ YG++ P
Sbjct: 359 PDVTAVVAGHTDSTHSNAYNKKLSQNRANAVKTALVEKYGIDASRIEAVGYGEDKPIATN 418
Query: 138 HDEDAYAKNRRAIV 151
+ KNRR +V
Sbjct: 419 KTKAGRQKNRRVVV 432
>gi|89075798|ref|ZP_01162186.1| putative peptidoglycan-associated lipoprotein [Photobacterium sp.
SKA34]
gi|90580128|ref|ZP_01235936.1| putative peptidoglycan-associated lipoprotein [Vibrio angustum S14]
gi|89048530|gb|EAR54105.1| putative peptidoglycan-associated lipoprotein [Photobacterium sp.
SKA34]
gi|90439013|gb|EAS64196.1| putative peptidoglycan-associated lipoprotein [Vibrio angustum S14]
Length = 180
Score = 81.8 bits (200), Expect = 3e-14, Method: Composition-based stats.
Identities = 54/179 (30%), Positives = 85/179 (47%), Gaps = 27/179 (15%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD------ 50
MQ + I I L +T+ + S D+ D+ ++ + + +Q + D
Sbjct: 1 MQLNKILKSLAIALPMMTLAACSSTDSADSSAANQNGTNGGGTSPDQTIVTPVDPSGSMS 60
Query: 51 ----------------SVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELG 93
++FF + I+P +L ++L H ++EGHADE G
Sbjct: 61 EEQLLEQQLQQLRQEQTIFFKFDNSEIQPEYQAILEAHAAYLRDHPSIKVIVEGHADERG 120
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ +IALG RRA AV Y A G+ AS++ + SYG+E P V GH + YAKNRRA++
Sbjct: 121 TPEYNIALGERRANAVAQYLQALGVPASQLSIVSYGEEKPLVLGHTDADYAKNRRAVLV 179
>gi|326561460|gb|EGE11810.1| outer membrane protein CD [Moraxella catarrhalis 46P47B1]
gi|326562231|gb|EGE12559.1| outer membrane protein CD [Moraxella catarrhalis 7169]
gi|326567185|gb|EGE17307.1| outer membrane protein CD [Moraxella catarrhalis BC1]
gi|326568467|gb|EGE18547.1| outer membrane protein CD [Moraxella catarrhalis BC7]
gi|326572021|gb|EGE22023.1| outer membrane protein CD [Moraxella catarrhalis BC8]
gi|326574959|gb|EGE24889.1| outer membrane protein CD [Moraxella catarrhalis 101P30B1]
Length = 453
Score = 81.4 bits (199), Expect = 3e-14, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 49/149 (32%), Gaps = 9/149 (6%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+ G + P + +L E+ + VFFD I+P + ++ + + +
Sbjct: 299 ACPGTPV--NTVVDPRGCPVQVNLVEELRQEL--RVFFDYDKSIIKPQYREEVAKVAAQM 354
Query: 77 EKHD---CDFLIEGHADE-LGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKE 131
+ D S + L RA AV + +R+ YG +
Sbjct: 355 REFPNATATIEGHASRDSARSSARYNQRLSEARANAVKSMLSNEFGIAPNRLNAVGYGFD 414
Query: 132 MPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
P + A NRR + G + T
Sbjct: 415 RPIAPNTTAEGKAMNRRVEAVITGSKTTT 443
>gi|168260613|ref|ZP_02682586.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|205350258|gb|EDZ36889.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
Length = 220
Score = 81.4 bits (199), Expect = 3e-14, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD+SS +++PA L+ + L+++ + G+ D
Sbjct: 94 GTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGADTLTGVAMVLKEYPKTAVNVVGYTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + ++ L +RA +V + + +G+ ASR++ + G P + A+NRR
Sbjct: 154 STGSHDLNMRLSQQRADSVASSLITQGVDASRIRTSGMGPANPIASNSTAEGKAQNRRVE 213
Query: 151 VFLK 154
+ L
Sbjct: 214 ITLS 217
>gi|167644153|ref|YP_001681816.1| OmpA/MotB domain-containing protein [Caulobacter sp. K31]
gi|167346583|gb|ABZ69318.1| OmpA/MotB domain protein [Caulobacter sp. K31]
Length = 224
Score = 81.4 bits (199), Expect = 3e-14, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 45/115 (39%), Gaps = 2/115 (1%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIA 100
+Q + V F ++P +VL ++ I GHAD G + +
Sbjct: 106 DQIVLVMPSDVTFAVDKSEVQPQFTRVLDDVARTLNAYPQTTIDIVGHADSSGPDDYNQT 165
Query: 101 LGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L RRA +V +Y + R+ V G+ P + A+NRR + L+
Sbjct: 166 LSERRASSVASYLTNVGRVVPDRVFVAGQGERQPIASNDTPEGRAQNRRVEIILR 220
>gi|91213065|ref|YP_543051.1| putative outer membrane lipoprotein [Escherichia coli UTI89]
gi|117625836|ref|YP_859159.1| putative outer membrane lipoprotein [Escherichia coli APEC O1]
gi|218560629|ref|YP_002393542.1| outer membrane lipoprotein [Escherichia coli S88]
gi|306816094|ref|ZP_07450232.1| putative outer membrane lipoprotein [Escherichia coli NC101]
gi|331649382|ref|ZP_08350468.1| inner membrane lipoprotein YiaD [Escherichia coli M605]
gi|91074639|gb|ABE09520.1| putative outer membrane protein [Escherichia coli UTI89]
gi|115514960|gb|ABJ03035.1| conserved hypothetical protein [Escherichia coli APEC O1]
gi|218367398|emb|CAR05180.1| putative outer membrane lipoprotien [Escherichia coli S88]
gi|281180597|dbj|BAI56927.1| conserved hypothetical protein [Escherichia coli SE15]
gi|294489870|gb|ADE88626.1| OmpA family protein [Escherichia coli IHE3034]
gi|305850490|gb|EFM50947.1| putative outer membrane lipoprotein [Escherichia coli NC101]
gi|307628634|gb|ADN72938.1| putative outer membrane lipoprotein [Escherichia coli UM146]
gi|323949796|gb|EGB45680.1| OmpA family protein [Escherichia coli H252]
gi|330909615|gb|EGH38129.1| outer membrane protein A precursor [Escherichia coli AA86]
gi|331041880|gb|EGI14024.1| inner membrane lipoprotein YiaD [Escherichia coli M605]
Length = 219
Score = 81.4 bits (199), Expect = 3e-14, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD+SS +++PA L+ + L+++ + G+ D
Sbjct: 94 GTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + ++ L +RA +V + + +G+ ASR++ G P + A+NRR
Sbjct: 154 STGSHDLNMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVE 213
Query: 151 VFLK 154
+ L
Sbjct: 214 ITLS 217
>gi|329295949|ref|ZP_08253285.1| peptidoglycan-associated outer membrane lipoprotein [Plautia stali
symbiont]
Length = 172
Score = 81.4 bits (199), Expect = 3e-14, Method: Composition-based stats.
Identities = 54/171 (31%), Positives = 82/171 (47%), Gaps = 19/171 (11%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSP--------------DTVLNESSLQE 42
MQ + + + L I + + S N + + + +E + +
Sbjct: 1 MQLNKVLKGLMLALPVIAVAACSSHKNNNNDQTGMGADGAYGAGAGQNGNMSSDEQARLQ 60
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIAL 101
+ V+F Y ++ Q+L ++L + IEGHADE G+ +IAL
Sbjct: 61 MQQLQQNNIVYFGLDKYDVQSEYAQMLDQHAAFLRSNPSYKVTIEGHADERGTPEYNIAL 120
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
G RRA AV Y +G+SA +M + SYGKE P+V GHDE AYAKNRRA++
Sbjct: 121 GERRANAVKMYLQGKGVSAHQMSIVSYGKEKPAVLGHDEAAYAKNRRAVLV 171
>gi|328473467|gb|EGF44315.1| outer membrane protein OmpA [Vibrio parahaemolyticus 10329]
Length = 319
Score = 81.4 bits (199), Expect = 3e-14, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Query: 54 FDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FD +S +++P L N + E + G+ D G+ + + +RA +V N
Sbjct: 210 FDLNSTTLKPESASKLDNLVAFLNEHPQAKVEVVGYTDTSGAAAYNQKVSEKRAESVANA 269
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V +GI ASR++ G+ P + +NRR + +
Sbjct: 270 LVEKGIDASRIQARGEGENNPIASNDTREGRQQNRRVEIVV 310
>gi|307547058|ref|YP_003899537.1| OmpA/MotB domain protein [Halomonas elongata DSM 2581]
gi|307219082|emb|CBV44352.1| OmpA/MotB domain protein [Halomonas elongata DSM 2581]
Length = 223
Score = 81.4 bits (199), Expect = 3e-14, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 49/124 (39%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHA 89
T + ++ V F S + PA L+++ + + D I GH
Sbjct: 94 QGTGIGVERQGNDIVLNMPSEVTFGFDSSDLTPAATSALNDVSNVLTQYTDTRINIAGHT 153
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G + L RRA AV Y G+SA R+ + YG+ P E A+NRR
Sbjct: 154 DSTGDAGYNQRLSERRAQAVGQYLSQSGVSAGRLNMQGYGENQPVASNDTEAGRAQNRRV 213
Query: 150 IVFL 153
+ L
Sbjct: 214 EMTL 217
>gi|218888823|ref|YP_002437687.1| hypothetical protein PLES_00791 [Pseudomonas aeruginosa LESB58]
gi|218769046|emb|CAW24806.1| hypothetical protein PLES_00791 [Pseudomonas aeruginosa LESB58]
Length = 449
Score = 81.4 bits (199), Expect = 3e-14, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 43/123 (34%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+ ++ ++ F ++S S+R +L + L K L+ GH+D
Sbjct: 321 VAVEDAVDRSVVTIRGDELFASASASVRDEFQPLLLRIADALRKVKGQVLVTGHSDNRPI 380
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
S+ L RA V + A A R P + + A+NRR
Sbjct: 381 ATLRYPSNWKLSQARAQEVADLLGATTGDAGRFTAEGRSDTEPVASNANAEGRARNRRVE 440
Query: 151 VFL 153
+ +
Sbjct: 441 ITV 443
>gi|149921395|ref|ZP_01909848.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
gi|149817715|gb|EDM77180.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
Length = 224
Score = 81.4 bits (199), Expect = 3e-14, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 50/140 (35%), Gaps = 10/140 (7%)
Query: 22 DNLDTKISSPDTVLNESSLQ---------EQFSSSVGDSVFFDTSSYSIRPADIQVLSNL 72
D LD P+ V ++ + ++ + V+F +I P +L ++
Sbjct: 75 DTLDQCPEDPEDVDGDADEDGCPDLLCRLDPCEIAIFEKVYFAYDESTIEPRSFPLLKDI 134
Query: 73 GSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
I GH D G + L RR +V + ++ G++ ++ YG+
Sbjct: 135 AFVLGYSPQVTIQIAGHTDSKGRSEYNEGLSQRRVDSVREHLLSLGVNDQQLSSVGYGEM 194
Query: 132 MPSVYGHDEDAYAKNRRAIV 151
P E A NRR
Sbjct: 195 TPIDTNRTEAGRAHNRRVEF 214
>gi|117920971|ref|YP_870163.1| OmpA/MotB domain-containing protein [Shewanella sp. ANA-3]
gi|117613303|gb|ABK48757.1| OmpA/MotB domain protein [Shewanella sp. ANA-3]
Length = 178
Score = 81.4 bits (199), Expect = 3e-14, Method: Composition-based stats.
Identities = 47/177 (26%), Positives = 76/177 (42%), Gaps = 25/177 (14%)
Query: 1 MQYSTIF-IILSAITMMSISGIDNLDTKISSPDTVLNESSLQ------------------ 41
M + + +L A+ +M+IS + + N S +
Sbjct: 1 MDLNKLLKAMLVALPIMAISACSSTSESETDAMGSTNGSGSELNGGGVQTGGIGGMLSPE 60
Query: 42 -----EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
+ ++FD ++ VL G++ +E LIEGHADE G+
Sbjct: 61 EQQRQQLEQLRKEHIIYFDFDRSEVQTEFAAVLEAHGTYLVEHPSVRVLIEGHADERGTP 120
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+IALG RRA AV Y G+ S+M + SYG+E P + ++ +AKNRRA++
Sbjct: 121 EYNIALGERRAKAVAKYLQGMGVQPSQMSIVSYGEEKPLDFTRTDEGFAKNRRAVLV 177
>gi|110598626|ref|ZP_01386892.1| OmpA/MotB [Chlorobium ferrooxidans DSM 13031]
gi|110339738|gb|EAT58247.1| OmpA/MotB [Chlorobium ferrooxidans DSM 13031]
Length = 150
Score = 81.4 bits (199), Expect = 3e-14, Method: Composition-based stats.
Identities = 44/156 (28%), Positives = 71/156 (45%), Gaps = 12/156 (7%)
Query: 1 MQYSTIF---IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS 57
M+ + +I+ A+ ++ G + + + V VFFD
Sbjct: 1 MKTVSPLFKTLIIPAMLLLGACGSEK--------EVAVAPPPPPPPAVVPVLGDVFFDFD 52
Query: 58 SYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
IR + L WL+ + ++EGH D G+ ++ALG RRA A ++ V
Sbjct: 53 KSDIRTDAVDQLKTNAQWLQANPSQKVVVEGHCDNRGTAEYNLALGERRAAAARDFVVNL 112
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
G A+R+K SYG+E P G+ E+A+A+NRRA
Sbjct: 113 GTDAARVKTVSYGEERPFAQGNTEEAWAQNRRAHFI 148
>gi|75676898|ref|YP_319319.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255]
gi|74421768|gb|ABA05967.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255]
Length = 167
Score = 81.4 bits (199), Expect = 3e-14, Method: Composition-based stats.
Identities = 53/142 (37%), Positives = 76/142 (53%), Gaps = 2/142 (1%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNE-SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL 72
+M + + + +D Q+ F +VGD VFF++ S+ P I L
Sbjct: 22 SMGACANKNPMDGSGGRGGMAGMAAPGSQQDFVVNVGDRVFFESDQTSLSPQAITTLEKQ 81
Query: 73 GSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
WL+ H F IEGHADE G+R +IALG RRA +V ++ +RGI SRM+ SYGKE
Sbjct: 82 AHWLQTYHRYSFTIEGHADERGTREYNIALGARRAQSVRSFLASRGIDPSRMRTISYGKE 141
Query: 132 MPSVYGHDEDAYAKNRRAIVFL 153
P +D +++NRRA+ L
Sbjct: 142 RPVAVCNDISCWSQNRRAVTVL 163
>gi|323492645|ref|ZP_08097789.1| OmpA/MotB domain-containing protein [Vibrio brasiliensis LMG 20546]
gi|323313020|gb|EGA66140.1| OmpA/MotB domain-containing protein [Vibrio brasiliensis LMG 20546]
Length = 323
Score = 81.4 bits (199), Expect = 3e-14, Method: Composition-based stats.
Identities = 33/163 (20%), Positives = 65/163 (39%), Gaps = 6/163 (3%)
Query: 2 QYSTIFIILSAITMMSISG--IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSY 59
Y++ +++SA I D I+ + + ++++FDT SY
Sbjct: 158 NYNSHMLLVSAAFTFGAVNRPIPGADEVINQYELEPVVAKTSTVLQKPT-NAIYFDTDSY 216
Query: 60 SIRPADIQVL---SNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
+I + + + + + GH D G+ + + L RA AV N+ + +
Sbjct: 217 AIDGEWVVEKKAQRIICLLRKYPESKVDLIGHTDAEGTADYNQNLSEHRAQAVANWLMTK 276
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
I+ ++ + G P+ ++ A NRR + LKG N
Sbjct: 277 DIAQEQISLQGVGDTQPASSNLTPESRALNRRVEMELKGINDN 319
>gi|299137972|ref|ZP_07031152.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX8]
gi|298599902|gb|EFI56060.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX8]
Length = 513
Score = 81.4 bits (199), Expect = 3e-14, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
+ + ++VL S ++ D V FDT+ ++++P L+ + +
Sbjct: 363 SEADASAVREKLRAQLNSVLATSESARGLIVNMSD-VLFDTAKFTLKPDTKVSLAKVATI 421
Query: 76 LEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
L+ + +EG+ D +G + L RA AV ++ V G+ A+ + YGK P
Sbjct: 422 LQLYPGLKVQVEGYTDSVGGDEYNQKLSENRANAVHDFLVQNGVPAANVTAAGYGKNKPV 481
Query: 135 VYGHDEDAYAKNRRAIVFLKG 155
A+NRR + + G
Sbjct: 482 ADNGTAAGRAQNRRVNLVVSG 502
>gi|262038680|ref|ZP_06012041.1| outer membrane protein [Leptotrichia goodfellowii F0264]
gi|261747295|gb|EEY34773.1| outer membrane protein [Leptotrichia goodfellowii F0264]
Length = 147
Score = 81.4 bits (199), Expect = 3e-14, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 1/122 (0%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ +E S+ FD +++P +L NL ++E +D D I GH D
Sbjct: 22 DITKVKGPKEVTVVLDERSLLFDFDKSNVKPQYYGILQNLKEYIEVNDYDVTIIGHTDSK 81
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIV 151
G+ ++ LG+RRA +V + G+ ASR+ V S G+E P + A NRR
Sbjct: 82 GTNEYNMKLGMRRAESVKAKMIEFGVPASRIVGVESRGEEEPVATNDTAEGRALNRRIEF 141
Query: 152 FL 153
L
Sbjct: 142 KL 143
>gi|4580966|gb|AAD24553.1|AF117961_1 OprF [Pseudomonas chlororaphis subsp. aureofaciens]
Length = 325
Score = 81.4 bits (199), Expect = 3e-14, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 2/112 (1%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGL 103
V V FD ++P + NL +++++ ++EGH D +G + L
Sbjct: 210 VVRVELDVKFDFDKSVVKPNSYADIKNLADFMKQYPQTTTVVEGHTDSVGPDAYNQKLSE 269
Query: 104 RRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RRA AV ++ + +SR++ YG+ P E A NRR ++
Sbjct: 270 RRANAVKQVLTSQYGVESSRVQSVGYGESRPVADNATEAGRAVNRRVEAQVE 321
>gi|77163684|ref|YP_342209.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707]
gi|254435498|ref|ZP_05049005.1| peptidoglycan-associated lipoprotein, putative [Nitrosococcus
oceani AFC27]
gi|76881998|gb|ABA56679.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707]
gi|207088609|gb|EDZ65881.1| peptidoglycan-associated lipoprotein, putative [Nitrosococcus
oceani AFC27]
Length = 187
Score = 81.4 bits (199), Expect = 3e-14, Method: Composition-based stats.
Identities = 51/187 (27%), Positives = 78/187 (41%), Gaps = 31/187 (16%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNE----------------------- 37
M+ +F +L+ I + T+ PD V+ E
Sbjct: 1 MRLVILFFLLAGIYGLVGCAGGTATTQGGPPDVVVEERGASPYPEGEALEEESATTWGIG 60
Query: 38 -------SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHA 89
L + S V+F+ S I+ D ++ G + + D +EGH
Sbjct: 61 EGAAYQGDPLADPASPLASRVVYFEFDSSEIQQDDRPIVEAHGGYLAKHPDIKVTLEGHT 120
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
DE GSR ++ALG RRA AV + + G S +++V SYG+E P+V G DE A+ NRR
Sbjct: 121 DERGSREYNLALGERRANAVRSLILLMGASEDQVEVVSYGEERPAVDGQDEGAWQLNRRV 180
Query: 150 IVFLKGC 156
+ G
Sbjct: 181 EILYPGE 187
>gi|224367491|ref|YP_002601654.1| OmpA1 [Desulfobacterium autotrophicum HRM2]
gi|223690207|gb|ACN13490.1| OmpA1 [Desulfobacterium autotrophicum HRM2]
Length = 374
Score = 81.4 bits (199), Expect = 3e-14, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 53/130 (40%), Gaps = 1/130 (0%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD 82
+ +P ++ + V +FD I+PA + L + L+
Sbjct: 240 TKKPMVQAPAPTPIVATPPAVEKAWVVGEAYFDFDKSIIKPAGFEFLDKVVDVLKSRPAL 299
Query: 83 -FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
I+GH D +G+R + AL LRRA AV Y + +GI +R+ + P +
Sbjct: 300 FVKIQGHTDSIGTRKYNDALSLRRAKAVKTYLINKGIDKNRLSCEGFAFSKPVASNKTAE 359
Query: 142 AYAKNRRAIV 151
A NRR +
Sbjct: 360 GRAMNRRVEL 369
>gi|330503720|ref|YP_004380589.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
gi|328918006|gb|AEB58837.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
Length = 262
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 56/135 (41%), Gaps = 2/135 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
+ + LN + ++GD + F + + L+ L + +
Sbjct: 124 QQRNVDLQRQIDGLNAEETERGLLVTLGD-LLFASGRAELNGNANHNLATLTDFLNRHPE 182
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
IEGH D +GS +++ L RRA +V ++ ++GI+ASR+ + G+ P
Sbjct: 183 RTVTIEGHTDNVGSESANFGLSQRRADSVKSHLQSQGIAASRLLASGMGEGSPVAGNDSA 242
Query: 141 DAYAKNRRAIVFLKG 155
+ NRR + +
Sbjct: 243 EGRQLNRRVEIIISN 257
>gi|315186462|gb|EFU20222.1| OmpA/MotB domain protein [Spirochaeta thermophila DSM 6578]
Length = 395
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 54/134 (40%), Gaps = 2/134 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ ++ I E E+ + +++ F S + P + + L + L ++
Sbjct: 259 EEVEAAIEDLQIPDAEVETSEEGVTIRLENIQFPPDSAVLLPEEQEKLRKIAQILSRYPE 318
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHD 139
L+EGH G+ +AL + RA AV ++ + ++ + YG P
Sbjct: 319 RDLLVEGHTALAGTPEGRLALSIERAKAVADFLMKLGVRRPEQIVIQGYGATRPIADNAT 378
Query: 140 EDAYAKNRRAIVFL 153
E ++NRR + +
Sbjct: 379 EAGRSRNRRVEITI 392
>gi|291286826|ref|YP_003503642.1| OmpA/MotB domain protein [Denitrovibrio acetiphilus DSM 12809]
gi|290883986|gb|ADD67686.1| OmpA/MotB domain protein [Denitrovibrio acetiphilus DSM 12809]
Length = 368
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
Query: 51 SVFFDTSSYSIRPAD-IQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
V F T+S I + ++ + + + I+GHAD G+ + ++ L +RA +V
Sbjct: 263 DVRFKTNSSEIDESYVDDIILFVKFMKDSPAINIEIQGHADSRGTDDYNMVLSEKRAKSV 322
Query: 110 FNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ A +R+ V YG+ P + KNRR ++
Sbjct: 323 AKMLTEKYGIAENRISVIGYGETKPIAPNDSPENMRKNRRIDTVIR 368
>gi|296113910|ref|YP_003627848.1| outer membrane protein CD [Moraxella catarrhalis RH4]
gi|149757|gb|AAA66180.1| outer membrane protein CD [Moraxella catarrhalis]
gi|45685720|gb|AAS75593.1| OmpCD [Moraxella catarrhalis O35E]
gi|295921604|gb|ADG61955.1| outer membrane protein CD [Moraxella catarrhalis RH4]
gi|326560587|gb|EGE10968.1| outer membrane protein CD [Moraxella catarrhalis 103P14B1]
gi|326573968|gb|EGE23918.1| outer membrane protein CD [Moraxella catarrhalis O35E]
Length = 453
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 49/149 (32%), Gaps = 9/149 (6%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+ G + P + +L E+ + VFFD I+P + ++ + + +
Sbjct: 299 ACPGTPV--NTVVDPRGCPVQVNLVEELRQEL--RVFFDYDKSIIKPQYREEVAKVAAQM 354
Query: 77 EKHD---CDFLIEGHADE-LGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKE 131
+ D S + L RA AV + +R+ YG +
Sbjct: 355 REFPNATATIEGHASRDSARSSARYNQRLSEARANAVKSMLSNEFGIAPNRLNAVGYGFD 414
Query: 132 MPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
P + A NRR + G + T
Sbjct: 415 RPIAPNTTAEGKAMNRRVEAVITGSKTTT 443
>gi|70729258|ref|YP_258995.1| outer membrane protein OprF [Pseudomonas fluorescens Pf-5]
gi|68343557|gb|AAY91163.1| outer membrane protein OprF [Pseudomonas fluorescens Pf-5]
gi|154759407|gb|ABS85198.1| major outer membrane porin [Pseudomonas fluorescens]
Length = 325
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAV 109
V FD ++P + NL +++++ ++EGH D +G + L RRA AV
Sbjct: 216 DVKFDFDKSVVKPNSYADIKNLADFMKQYPQTTTVVEGHTDSVGPDAYNQKLSERRANAV 275
Query: 110 FNYFVARGIS-ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
V + A+R++ YG+ P E A NRR ++
Sbjct: 276 KQVLVNQYGVGANRVQSVGYGESRPVADNATEAGRAVNRRVEASVE 321
>gi|85058865|ref|YP_454567.1| peptidoglycan-associated outer membrane lipoprotein [Sodalis
glossinidius str. 'morsitans']
gi|84779385|dbj|BAE74162.1| peptidoglycan-associated lipoprotein [Sodalis glossinidius str.
'morsitans']
Length = 170
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSP------------DTVLNESSLQEQF 44
MQ + + + + + + + S + + S + +E + +
Sbjct: 1 MQLNKVLKGLMLAVPVMAIAACSSHKSANNGDESAMGAGTGMDMNGNNASSDEQARLQMQ 60
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGL 103
+ V+FD Y I Q+L ++L + +EGHADE G+ +IALG
Sbjct: 61 ELQRNNIVYFDLDKYDILSEFAQMLDAHANFLRSNPSYKVTVEGHADERGTPEYNIALGE 120
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
RRA AV Y +G+ A ++ + SYGKE P+V GHDE AYAKNRRA++
Sbjct: 121 RRANAVKMYLQGKGVYADQIAIVSYGKEKPAVLGHDESAYAKNRRAVLV 169
>gi|28897538|ref|NP_797143.1| outer membrane protein OmpA [Vibrio parahaemolyticus RIMD 2210633]
gi|153839084|ref|ZP_01991751.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ3810]
gi|260364598|ref|ZP_05777200.1| outer membrane protein OmpA [Vibrio parahaemolyticus K5030]
gi|260878297|ref|ZP_05890652.1| outer membrane protein OmpA [Vibrio parahaemolyticus AN-5034]
gi|260898127|ref|ZP_05906623.1| outer membrane protein OmpA [Vibrio parahaemolyticus Peru-466]
gi|260901940|ref|ZP_05910335.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ4037]
gi|28805750|dbj|BAC59027.1| outer membrane protein OmpA [Vibrio parahaemolyticus RIMD 2210633]
gi|149747422|gb|EDM58382.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ3810]
gi|308086135|gb|EFO35830.1| outer membrane protein OmpA [Vibrio parahaemolyticus Peru-466]
gi|308090168|gb|EFO39863.1| outer membrane protein OmpA [Vibrio parahaemolyticus AN-5034]
gi|308106787|gb|EFO44327.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ4037]
gi|308115125|gb|EFO52665.1| outer membrane protein OmpA [Vibrio parahaemolyticus K5030]
Length = 319
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Query: 54 FDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FD +S +++P L N + E + G+ D G+ + + +RA +V N
Sbjct: 210 FDLNSTTLKPESASKLDNLVAFLNEHPQAKVEVVGYTDTSGAAAYNQKVSEKRAESVANA 269
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V +GI ASR++ G+ P + +NRR + +
Sbjct: 270 LVEKGIDASRIQARGEGENNPIASNDTREGRQQNRRVEIVV 310
>gi|288957826|ref|YP_003448167.1| peptidoglycan-associated lipoprotein [Azospirillum sp. B510]
gi|288910134|dbj|BAI71623.1| peptidoglycan-associated lipoprotein [Azospirillum sp. B510]
Length = 155
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 50/136 (36%), Positives = 73/136 (53%), Gaps = 1/136 (0%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
S ++ ++ E F +VGD VFF + + P L WL+
Sbjct: 19 STPNDAANSAATGAQQSIRPGSAEDFVVNVGDRVFFGLDRFDLSPEARATLDRQAKWLQT 78
Query: 79 H-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+ +EGHADE G+R ++ALG RRA +V NY A+GI ASR+ V SYGKE P+V G
Sbjct: 79 YGSVTVTVEGHADERGTREYNLALGERRANSVKNYLAAKGIPASRVNVVSYGKERPAVVG 138
Query: 138 HDEDAYAKNRRAIVFL 153
+E A+++NRR + +
Sbjct: 139 SNEAAWSQNRRGVTVV 154
>gi|237740757|ref|ZP_04571238.1| outer membrane porin F [Fusobacterium sp. 2_1_31]
gi|229422774|gb|EEO37821.1| outer membrane porin F [Fusobacterium sp. 2_1_31]
Length = 173
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALG 102
S+ + + FD Y+++ L+ L E D I+G+ D +G+ ++ L
Sbjct: 60 LILSMPELILFDFDKYAVKDGIKPSLATLAKALGENKDIHIKIDGYTDFIGTEAYNLELS 119
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
++RA A+ ++ +++G S + + YG++ P+ E ++NRR +
Sbjct: 120 VKRARAIKDFLISKGAIGSNISIEGYGEQNPADTNKTEAGRSRNRRVEFIIS 171
>gi|30248243|ref|NP_840313.1| outer membrane protein [Nitrosomonas europaea ATCC 19718]
gi|30180128|emb|CAD84130.1| Bacterial outer membrane protein [Nitrosomonas europaea ATCC 19718]
Length = 171
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 16/170 (9%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKIS---------------SPDTVLNESSLQEQFSSS 47
IF +L + + + + T + + LQ+ +
Sbjct: 1 MRKIFAVLVICLLSACASDNAQQTSDVEDHSYSREGEGTRGGAGSDGFGMNPLQDPSNIL 60
Query: 48 VGDSVFFDTSSYSIRPADIQ-VLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
SV+FD SY+++ VL++ + + L++G+ DE GSR ++ALG RRA
Sbjct: 61 SRRSVYFDFDSYTVKSEYRDLVLAHAAYLRDNTNAQVLLQGNTDERGSREYNLALGQRRA 120
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
+V + + G +++ S G+E P G DE ++A+NRR + +G
Sbjct: 121 NSVKDILLLSGARDQQVEAVSLGEEKPRALGSDESSWAENRRTDILYQGE 170
>gi|327405084|ref|YP_004345922.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
16823]
gi|327320592|gb|AEA45084.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
Length = 681
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 2/130 (1%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLI 85
K + + L L+ + ++ D + +D +S + +L +L+ + ++
Sbjct: 552 KENRVNNNLEVKELKVGEAYTIND-ILYDYNSDFLSTKSKFILREFARFLKSNPTVKIMV 610
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+GH D G ++ L RRA V Y ++GI + R++ YG+ P V + AK
Sbjct: 611 QGHTDSDGDDAKNLDLSDRRAKGVKAYLQSQGIESDRLEAKGYGETKPKVENDTPENKAK 670
Query: 146 NRRAIVFLKG 155
NRR ++G
Sbjct: 671 NRRTDFLIQG 680
>gi|261210838|ref|ZP_05925129.1| outer membrane protein A precursor [Vibrio sp. RC341]
gi|260840088|gb|EEX66683.1| outer membrane protein A precursor [Vibrio sp. RC341]
Length = 309
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 45/100 (45%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYF 113
+++ S+ + + L + I GH D LGS + + RRA V +YF
Sbjct: 208 LFSNNSSLLMSTKSLEGPLDVLKKDPKLKVNIVGHTDSLGSDKYNQWMSERRAKTVADYF 267
Query: 114 VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+A GIS SR+ G+ P + E A+NRR + +
Sbjct: 268 IANGISPSRITALGRGESEPIANNNSELGRAQNRRVEINI 307
>gi|78224682|ref|YP_386429.1| OmpA/MotB [Geobacter metallireducens GS-15]
gi|78195937|gb|ABB33704.1| OmpA/MotB [Geobacter metallireducens GS-15]
Length = 194
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ +K S + + + Q +++ +FF+ S + + L L+
Sbjct: 61 KEVQSKDQSKEGAAKGTMTEAQLQAALT-KIFFNFDSSVLSSEGRETLVKNAELLKSASF 119
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
IEG+ DE GS ++ALG RRA A Y + G+ A R+ + SYG+E P+ GHDE
Sbjct: 120 KVRIEGNCDERGSDEYNLALGERRAQAAMKYLLTMGVPADRLSIISYGEEKPADPGHDEA 179
Query: 142 AYAKNRRAIVFLK 154
A+AKNRR +
Sbjct: 180 AWAKNRRDEFVVM 192
>gi|90581117|ref|ZP_01236916.1| Putative OmpA family protein [Vibrio angustum S14]
gi|90437638|gb|EAS62830.1| Putative OmpA family protein [Vibrio angustum S14]
Length = 229
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 56/135 (41%), Gaps = 1/135 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
+ + + + + + ++ + + F ++ + L N+ ++++
Sbjct: 92 VQEAKLRKQLSSSGITVTRNGDNIVLNMPNEITFGFDQANLNDRAMNALHNVAIVAKEYE 151
Query: 81 -CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ G D G+ + ++ L RA AV NY + +G++A+R+ G+ P
Sbjct: 152 KTQLNVLGFTDSKGAASYNLRLSQVRADAVANYLIRQGVNANRVVSQGRGESNPIASNST 211
Query: 140 EDAYAKNRRAIVFLK 154
+ A+NRR + L
Sbjct: 212 ANGRAQNRRVEIILS 226
>gi|294140562|ref|YP_003556540.1| peptidoglycan-associated lipoprotein [Shewanella violacea DSS12]
gi|293327031|dbj|BAJ01762.1| peptidoglycan-associated lipoprotein [Shewanella violacea DSS12]
Length = 178
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 50/177 (28%), Positives = 76/177 (42%), Gaps = 25/177 (14%)
Query: 1 MQYSTIF---------IILSAITMMSISGIDNL---------------DTKISSPDTVLN 36
M + +F I LSA + S S D +T +P
Sbjct: 1 MDLNKLFKAMLVALPIIALSACSSTSESETDATGSTTGSGSELVTGGVETGAVTPILTPE 60
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
E + ++FD S+ ++L G + +E + +IEGHADE G+
Sbjct: 61 EQQRLKYQELRKEHIIYFDFDRSSVSAHFAEILRAHGHYLVEHPNVRLMIEGHADERGTP 120
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+IALG RRA AV Y G+ S+M + SYG+E P + +D +A NRRA++
Sbjct: 121 EYNIALGERRAKAVAKYLQGMGVLPSQMSIVSYGEEKPLDFSRTDDGFAINRRAVLV 177
>gi|262149046|ref|ZP_06028189.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
cholerae INDRE 91/1]
gi|262031146|gb|EEY49767.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
cholerae INDRE 91/1]
Length = 133
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 46/132 (34%), Positives = 71/132 (53%), Gaps = 2/132 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHD 80
+D+ + L E L+EQ + +++F + +I +L+ + ++
Sbjct: 2 STVDSNGLNAQGQLTEQELKEQ-ALRENQTIYFAFDNATIASDYEAMLAAHAAYLVKNPS 60
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
IEGHADE G+ +IALG RRA AV Y A G+ A ++ + SYG+E P V G E
Sbjct: 61 LRVTIEGHADERGTPEYNIALGERRAQAVAKYLEALGVQAGQLSIVSYGEEKPLVLGQSE 120
Query: 141 DAYAKNRRAIVF 152
+AYAKNRRA++
Sbjct: 121 EAYAKNRRAVLV 132
>gi|146306454|ref|YP_001186919.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp]
gi|145574655|gb|ABP84187.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp]
Length = 210
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 50/137 (36%), Gaps = 2/137 (1%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ + V V FD ++ + L +++++
Sbjct: 71 ADAQQVAVAEEVVVEEVVVAEPRAEAVRVELDVKFDFDKSQVKQESYGDIKALADFMKQY 130
Query: 80 -DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYG 137
++EGH D +GS + L RRA AV V + + ++R++ YG+ P
Sbjct: 131 PQTSTVVEGHTDSVGSDAYNQGLSERRANAVREVLVNQYGVESNRVQAVGYGESRPVADN 190
Query: 138 HDEDAYAKNRRAIVFLK 154
+ A NRR ++
Sbjct: 191 ATAEGRAINRRVEAEVE 207
>gi|89068039|ref|ZP_01155456.1| OmpA/MotB family protein [Oceanicola granulosus HTCC2516]
gi|89046278|gb|EAR52335.1| OmpA/MotB family protein [Oceanicola granulosus HTCC2516]
Length = 173
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 49/138 (35%), Positives = 75/138 (54%), Gaps = 2/138 (1%)
Query: 18 ISGIDNLDTKISSPDT-VLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+G+ +++P + S F ++GD V F Y++ P VL WL
Sbjct: 28 GAGVPAAPAPVTNPGAGSAADPSSPAYFQQTIGDRVLFLVDQYTLTPEGRAVLDGQARWL 87
Query: 77 EKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+ + D +IEGHADE G+R ++ALG RRA AV Y V++G+ +SR++ +YGKE P
Sbjct: 88 QANADYRAVIEGHADEQGTREYNLALGSRRANAVREYLVSQGVPSSRLQTVTYGKERPLE 147
Query: 136 YGHDEDAYAKNRRAIVFL 153
E YA+NRRA+ +
Sbjct: 148 VCSAESCYAQNRRAVTVI 165
>gi|312892040|ref|ZP_07751540.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
gi|311295412|gb|EFQ72581.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
Length = 460
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 55/138 (39%), Gaps = 3/138 (2%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVF---FDTSSYSIRPADIQVLSNLGSW 75
SG+ P + + E+ V D++ FD +IR + L +
Sbjct: 322 SGVKVDGAGCPLPKAENVKVYITEEDKRVVKDAIANLEFDLGKATIRAHSLPSLDKVAEL 381
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
L + + GH D GS ++ L RA A+ Y V++G +ASR++ T YG P
Sbjct: 382 LVNKNFSLKLAGHTDNSGSAALNMRLSKERAEAIKTYLVSKGANASRIEATGYGMNQPIA 441
Query: 136 YGHDEDAYAKNRRAIVFL 153
+NRR L
Sbjct: 442 SNKTAAGRQQNRRVEFTL 459
>gi|326772523|ref|ZP_08231807.1| hypothetical protein HMPREF0059_00908 [Actinomyces viscosus C505]
gi|326637155|gb|EGE38057.1| hypothetical protein HMPREF0059_00908 [Actinomyces viscosus C505]
Length = 417
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 56/147 (38%), Gaps = 8/147 (5%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+ +S + + P + ++ DSV FD S +R L+NL
Sbjct: 269 STISAKPVPKAGKVGTFPSIDAAKPVQSCGTVITLEDSVLFDFGSSELRGEASTTLTNLA 328
Query: 74 SWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
+ ++ I+GH D + + L +RA AV + + G++A ++ YG+
Sbjct: 329 TVIKDSKAPKVQIQGHTDSVSDDAFNQKLSEQRAQAVSSALKSDGVAAD-LEAVGYGETK 387
Query: 133 PSVYG------HDEDAYAKNRRAIVFL 153
P + NRR VF+
Sbjct: 388 PVAPNENPDGSDNPAGRRLNRRVEVFV 414
>gi|134095751|ref|YP_001100826.1| putative outer membrane protein 3a (II*;G;d) [Herminiimonas
arsenicoxydans]
gi|133739654|emb|CAL62705.1| Putative outer membrane protein OmpA [Herminiimonas arsenicoxydans]
Length = 205
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Query: 58 SYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
++P L +L S L+ + + +I GH D +GS + L +RRA AV Y V +
Sbjct: 104 KAVLKPDGKAKLDDLASKLKDLNLEVIIAVGHTDSIGSDAYNQKLSIRRAEAVKGYLVGK 163
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
GI A R+ G++ P A+NRR + + G R
Sbjct: 164 GIDAKRVYTEGKGEKQPVATNKTAAGRAQNRRVEIEVVGTR 204
>gi|205354747|ref|YP_002228548.1| outer membrane lipoprotein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207858882|ref|YP_002245533.1| outer membrane lipoprotein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|205274528|emb|CAR39567.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|206710685|emb|CAR35045.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|261248795|emb|CBG26648.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|301160182|emb|CBW19704.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
Length = 209
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD+SS +++PA L+ + L+++ + G+ D
Sbjct: 83 GTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVVGYTD 142
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + ++ L +RA +V + + +G+ ASR++ + G P + A+NRR
Sbjct: 143 STGSHDLNMRLSQQRADSVASSLITQGVDASRIRTSGMGPANPIASNSTAEGKAQNRRVE 202
Query: 151 VFLK 154
+ L
Sbjct: 203 ITLS 206
>gi|24216314|ref|NP_713795.1| OmpA family protein [Leptospira interrogans serovar Lai str. 56601]
gi|24197586|gb|AAN50813.1| OmpA family protein [Leptospira interrogans serovar Lai str. 56601]
Length = 475
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 53/134 (39%), Gaps = 3/134 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ D + + + + +E + S+ +SV FD +S ++ L + S L+K+
Sbjct: 340 EEEDNQAAPESSPVEIRRTEEGIAISL-NSVLFDHNSSELKQEAKLELKRIASVLKKYAD 398
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFV-ARGISASRMKVTSYGKEMPSVYGHD 139
I GH D G + L RA +V +G+ RM YGK P
Sbjct: 399 REIRISGHTDNSGGEEYNRKLSRERALSVLKELRDEQGLEEKRMSYEGYGKSKPIADNST 458
Query: 140 EDAYAKNRRAIVFL 153
KNRR + +
Sbjct: 459 IQGRQKNRRVDITI 472
>gi|327334842|gb|EGE76553.1| putative outer membrane protein A [Propionibacterium acnes
HL097PA1]
Length = 368
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 49/136 (36%), Gaps = 2/136 (1%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW--LEK 78
++ L T E +E + SV FD S ++PA Q++ K
Sbjct: 231 VNALVTTTGDASDASRERVTKESMKIDLDASVLFDLDSDVVKPAGRQIIDRTAKQLVARK 290
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ G+ D GS + ++ L RRA +V ++ + G+ P
Sbjct: 291 VSGKIEVTGYTDSSGSASHNLDLSRRRAASVAKVLGSQLSKGITLVTAGKGEADPVASND 350
Query: 139 DEDAYAKNRRAIVFLK 154
E NRR + +K
Sbjct: 351 SEAGRRLNRRVTITVK 366
>gi|326565587|gb|EGE15750.1| outer membrane protein CD [Moraxella catarrhalis 12P80B1]
Length = 449
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 49/149 (32%), Gaps = 9/149 (6%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+ G + P + +L E+ + VFFD I+P + ++ + + +
Sbjct: 295 ACPGTPV--NTVVDPRGCPVQVNLVEELRQEL--RVFFDYDKSIIKPQYREEVAKVAAQM 350
Query: 77 EKHD---CDFLIEGHADE-LGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKE 131
+ D S + L RA AV + +R+ YG +
Sbjct: 351 REFPNATATIEGHASRDSARSSARYNQRLSEARANAVKSMLSNEFGIAPNRLNAVGYGFD 410
Query: 132 MPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
P + A NRR + G + T
Sbjct: 411 RPIAPNTTAEGKAMNRRVEAVITGSKTTT 439
>gi|163744900|ref|ZP_02152260.1| OmpA family domain protein [Oceanibulbus indolifex HEL-45]
gi|161381718|gb|EDQ06127.1| OmpA family domain protein [Oceanibulbus indolifex HEL-45]
Length = 221
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 53/126 (42%), Gaps = 1/126 (0%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEG 87
++ D+ + ++ ++ ++ + F T S S+ P L+ L + + + G
Sbjct: 91 AAMDSRVVITNTGDRLIVTLPQDILFATDSTSVAPGLRDDLAALAQNVNIYQNSTLQVVG 150
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
H D G + L RRA AV N ++ G+ R++ G+ P ++NR
Sbjct: 151 HTDSDGEAAYNQQLSERRAQAVGNILLSNGVPQQRLQTFGRGESQPVASNLSAAGKSQNR 210
Query: 148 RAIVFL 153
R + +
Sbjct: 211 RVEIVI 216
>gi|162453582|ref|YP_001615949.1| outer membrane protein [Sorangium cellulosum 'So ce 56']
gi|161164164|emb|CAN95469.1| probable outer membrane protein [Sorangium cellulosum 'So ce 56']
Length = 323
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 53/130 (40%), Gaps = 1/130 (0%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-F 83
+ ++S + + ++ +V F + + P + LS + + L+
Sbjct: 188 NAALASLKEIAAVKEEKRGVVITLSGAVLFASGKSELLPIAKEKLSQVAATLKDQGSPPI 247
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
IEGH D GS ++ L L RA AV + + G+ ++ +G + P +
Sbjct: 248 RIEGHTDSTGSAQANRKLSLERADAVKAHLITAGLPGDKIATVGHGPDRPVADNSSTEGR 307
Query: 144 AKNRRAIVFL 153
A NRR + +
Sbjct: 308 ANNRRVEIIV 317
>gi|57237120|ref|YP_178132.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
RM1221]
gi|86149517|ref|ZP_01067747.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
subsp. jejuni CF93-6]
gi|86151400|ref|ZP_01069615.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
subsp. jejuni 260.94]
gi|86153754|ref|ZP_01071957.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
subsp. jejuni HB93-13]
gi|88597159|ref|ZP_01100394.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
subsp. jejuni 84-25]
gi|121612869|ref|YP_999837.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
subsp. jejuni 81-176]
gi|157414426|ref|YP_001481682.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
subsp. jejuni 81116]
gi|167004808|ref|ZP_02270566.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni
subsp. jejuni 81-176]
gi|205356488|ref|ZP_03223252.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni
subsp. jejuni CG8421]
gi|218561794|ref|YP_002343573.1| peptidoglycan associated lipoprotein [Campylobacter jejuni subsp.
jejuni NCTC 11168]
gi|283955557|ref|ZP_06373052.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni
subsp. jejuni 1336]
gi|315123715|ref|YP_004065719.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni
subsp. jejuni ICDCCJ07001]
gi|1063274|emb|CAA58288.1| precursor of peptidoglycane associated lipoprotein [Campylobacter
jejuni]
gi|57165924|gb|AAW34703.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
RM1221]
gi|85839785|gb|EAQ57044.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
subsp. jejuni CF93-6]
gi|85841747|gb|EAQ58994.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
subsp. jejuni 260.94]
gi|85842715|gb|EAQ59927.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
subsp. jejuni HB93-13]
gi|87250340|gb|EAQ73298.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
subsp. jejuni 81-176]
gi|88190220|gb|EAQ94194.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
subsp. jejuni 84-25]
gi|112359500|emb|CAL34284.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni
subsp. jejuni NCTC 11168]
gi|157385390|gb|ABV51705.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni
subsp. jejuni 81116]
gi|205345675|gb|EDZ32314.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni
subsp. jejuni CG8421]
gi|283793018|gb|EFC31792.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni
subsp. jejuni 1336]
gi|307747070|gb|ADN90340.1| Peptidoglycan associated lipoprotein (Omp18) [Campylobacter jejuni
subsp. jejuni M1]
gi|315017437|gb|ADT65530.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni
subsp. jejuni ICDCCJ07001]
gi|315057553|gb|ADT71882.1| Outer membrane lipoprotein omp16 precursor [Campylobacter jejuni
subsp. jejuni S3]
gi|315926949|gb|EFV06311.1| peptidoglycan-associated lipoprotein [Campylobacter jejuni subsp.
jejuni DFVF1099]
gi|315929959|gb|EFV09113.1| peptidoglycan-associated lipoprotein [Campylobacter jejuni subsp.
jejuni 305]
gi|315931507|gb|EFV10474.1| peptidoglycan-associated lipoprotein [Campylobacter jejuni subsp.
jejuni 327]
Length = 165
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 10/164 (6%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG--------DSV 52
M+ I + ++S + S S + + + V
Sbjct: 1 MKKILFTSIAALAVVISGCSTKSTSVSGDSSVDSNRGSGGSDGWDIDSKISQLNDTLNKV 60
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHD--CDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+FD ++IRP V+S + +EG+ DE G+ + ALGL+RA AV
Sbjct: 61 YFDFDKFNIRPDMQNVVSTNANIFNTEVSGVSITVEGNCDEWGTDEYNQALGLKRAKAVK 120
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+A+G++A R+ V SYG+ P + A+NRRA L
Sbjct: 121 EALIAKGVNADRIAVKSYGETNPVCTEKTKACDAQNRRAEFKLS 164
>gi|297157602|gb|ADI07314.1| secreted protein [Streptomyces bingchenggensis BCW-1]
Length = 228
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 51/128 (39%), Gaps = 1/128 (0%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-F 83
+ + + D + ++ V FD +S + + + +EK +
Sbjct: 95 KSVVETDDGDERREDTNTKVKFALQAEVLFDKNSSKLGGEANARIRAIAQEIEKQNATSV 154
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
+ G D+LGS + L RA AV + A S+ + ++ YG++ P E+
Sbjct: 155 RVFGFTDDLGSALHGLKLSKERANAVQHALSANLDSSVQYQIRGYGEQYPIADNSTEEGR 214
Query: 144 AKNRRAIV 151
KNRR V
Sbjct: 215 KKNRRVEV 222
>gi|292669789|ref|ZP_06603215.1| chemotaxis protein MotB [Selenomonas noxia ATCC 43541]
gi|292648586|gb|EFF66558.1| chemotaxis protein MotB [Selenomonas noxia ATCC 43541]
Length = 304
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 46/128 (35%), Gaps = 6/128 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
++ +E + + F + S ++ Q++ + + L I GH D
Sbjct: 114 QDQVSTELSEEGLMIRLKERALFASGSAQLQGQAEQIVPVIAALLSSLPERVTISGHTDN 173
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARGI--SASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ S+ L RA ++ + + +R Y + P ++ A+
Sbjct: 174 VPISTAQFPSNWELSSARAVSLMRGLMTAQPTLNPARFSALGYSEYRPIASNDTDEGRAQ 233
Query: 146 NRRAIVFL 153
NRR VF+
Sbjct: 234 NRRVEVFI 241
>gi|162450796|ref|YP_001613163.1| hypothetical protein sce2524 [Sorangium cellulosum 'So ce 56']
gi|161161378|emb|CAN92683.1| putative membrane protein [Sorangium cellulosum 'So ce 56']
Length = 561
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 54/152 (35%), Gaps = 15/152 (9%)
Query: 22 DNLDTKISSPDTVLNESS----------LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
D D P E + + + V F T S I P +L
Sbjct: 396 DAKDACPKEPGQPSPEPTKNGCPQFIRRITGSSEIQILKQVQFATGSARILPNSYSILDE 455
Query: 72 LGS--WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSY 128
+ + IEGH D GS + L RA++V Y + RG I +R+ +
Sbjct: 456 VVRLLKVNPEITLVAIEGHTDNRGSDQLNEKLSNDRAHSVRTYLIERGGIDPARLTAAGF 515
Query: 129 GKEMPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
G + P + E KNRR ++ +NT
Sbjct: 516 GPKRPIDDNNTEAGRQKNRRVEFHIR--ESNT 545
>gi|91781922|ref|YP_557128.1| OmpA/MotB family outer membrane protein [Burkholderia xenovorans
LB400]
gi|296162179|ref|ZP_06844975.1| peptidoglycan-associated lipoprotein [Burkholderia sp. Ch1-1]
gi|91685876|gb|ABE29076.1| outer membrane protein, OmpA/MotB family [Burkholderia xenovorans
LB400]
gi|295887565|gb|EFG67387.1| peptidoglycan-associated lipoprotein [Burkholderia sp. Ch1-1]
Length = 169
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 12/163 (7%)
Query: 2 QYSTIFIILSAITMMSI-------SGIDNLDTKISSPDT----VLNESSLQEQFSSSVGD 50
+ F +L + + + + + P+ +N L + S
Sbjct: 4 KLRFAFAVLMVGALAACHSGVKLDENANKGGSVSAQPNPNDVATVNVDPLNDPNSPLAKR 63
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAV 109
S++FD SYS++ +L +L+ H LI+G+ DE G+ ++ALG +RA AV
Sbjct: 64 SIYFDFDSYSVKDDYQSLLQQHAQYLKSHPQRHVLIQGNTDERGTSEYNLALGQKRAEAV 123
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
G++ S+M+ S GKE P GHDE ++A+NRRA +
Sbjct: 124 RRSLSLMGVTDSQMEAVSLGKEKPQATGHDESSWAQNRRADLV 166
>gi|332085086|gb|EGI90266.1| inner membrane lipoprotein yiaD [Shigella boydii 5216-82]
Length = 238
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD+SS +++PA L+ + L+++ + G+ D
Sbjct: 113 GTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTD 172
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + ++ L +RA +V + + +G+ ASR++ G P + A+NRR
Sbjct: 173 STGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVE 232
Query: 151 VFLK 154
+ L
Sbjct: 233 ITLS 236
>gi|330807745|ref|YP_004352207.1| outer membrane protein OmpA [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327375853|gb|AEA67203.1| putative lipoprotein; putative outer membrane protein, OmpA
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 263
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 58/135 (42%), Gaps = 2/135 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
D + +I LN + + GD V F T+ +R + + +S L + E D
Sbjct: 116 DARNAQIKQLQDSLNAKQTERGTLVTFGD-VLFATNKSDLRASGMTNVSKLAQFLQENPD 174
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+IEG+ D GS + + +L RRA +V V G+ +R+ YGKE P
Sbjct: 175 RKVIIEGYTDSTGSDSYNQSLSERRASSVQLALVKMGVDPARIVTQGYGKEFPVADNTSV 234
Query: 141 DAYAKNRRAIVFLKG 155
A NRR V +
Sbjct: 235 SGRAMNRRVEVTISN 249
>gi|262404049|ref|ZP_06080604.1| outer membrane protein A precursor [Vibrio sp. RC586]
gi|262349081|gb|EEY98219.1| outer membrane protein A precursor [Vibrio sp. RC586]
Length = 335
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 58/142 (40%), Gaps = 2/142 (1%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD-SVFFDTSSYSIRPADIQVLSNL 72
++ + +D + +++ L + F S + FF+ S + I+ LSN+
Sbjct: 187 VLVDTNSTPVIDEYSVPAEELVSVELLPKTFIFSAKNMDGFFENDSSRLSHNVIEQLSNI 246
Query: 73 GSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
+ +I GH D GS + L RA N + G++ ++++ G+
Sbjct: 247 AATLNNHPQSRAVIVGHTDSTGSTAYNQLLSEDRAQEAANLLIELGVTPTQIEWRGLGES 306
Query: 132 MPSVYGHDEDAYAKNRRAIVFL 153
P H D A+NRR + +
Sbjct: 307 NPIADNHTADGRAQNRRIEITI 328
>gi|254302232|ref|ZP_04969590.1| outer membrane protein [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
gi|148322424|gb|EDK87674.1| outer membrane protein [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
Length = 196
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 3/127 (2%)
Query: 34 VLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG 93
L E +E ++ FD ++P ++L+NL ++ K+D + I GH D +
Sbjct: 49 ALKEEPPEEMTIVLDDRALNFDFDKSFVKPQYDEMLTNLKEFITKNDYEVTIVGHTDYIA 108
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
S ++ L RRA AV + G+ SR+ + + G+E P + AKNRR
Sbjct: 109 SNEYNMGLSKRRAEAVKAKLIELGLDPSRIVETVARGEEEPVADNSTTEGRAKNRRVEFK 168
Query: 153 L--KGCR 157
L +G +
Sbjct: 169 LVKRGAK 175
>gi|256419593|ref|YP_003120246.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
gi|256034501|gb|ACU58045.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
Length = 671
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 50/113 (44%), Gaps = 7/113 (6%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADELGSRNSSIALGLRRA 106
+ +++D ++RP + VL + S ++ + + + H D G ++ L +RA
Sbjct: 551 ILKDIYYDFDKATLRPQSLIVLDTVVSIMQDNPNIIIEMSAHTDSKGKDEYNMKLSQKRA 610
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYG------HDEDAYAKNRRAIVFL 153
+ +Y +++GIS+ RM YG+ P + + NRR +
Sbjct: 611 QSCVDYLISKGISSERMIAKGYGETRPIAPNTLPNGKDNPEGRQLNRRTEFKV 663
>gi|218550833|ref|YP_002384624.1| outer membrane lipoprotein [Escherichia fergusonii ATCC 35469]
gi|218358374|emb|CAQ91021.1| putative outer membrane lipoprotien [Escherichia fergusonii ATCC
35469]
gi|324111886|gb|EGC05866.1| OmpA family protein [Escherichia fergusonii B253]
gi|325499107|gb|EGC96966.1| outer membrane lipoprotein [Escherichia fergusonii ECD227]
Length = 219
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD++S +++PA L+ + L+++ + G+ D
Sbjct: 94 GTGVSVTRSGDNIILNMPNNVTFDSNSATLKPAGANTLTGVAMVLKEYPKTAVNVLGYTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + ++ L +RA +V + + +G++A+R+ G P + A+NRR
Sbjct: 154 STGGYDLNMRLSQQRADSVASALITQGVAANRINTRGMGPANPIASNSTAEGKAQNRRVE 213
Query: 151 VFLK 154
+ L
Sbjct: 214 ITLS 217
>gi|254428835|ref|ZP_05042542.1| Rickettsia 17 kDa surface antigen family [Alcanivorax sp. DG881]
gi|196195004|gb|EDX89963.1| Rickettsia 17 kDa surface antigen family [Alcanivorax sp. DG881]
Length = 221
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 50/123 (40%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
++ + E ++ ++ F T S +++ + VL + L ++ + GH D
Sbjct: 94 GAGVSVTRDGENIILNMPGNLTFATDSTNVKSSFDPVLDAVSEVLNEYKSTMIQVAGHTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G ++ L +RA AV N G+ R+ +G+ P + +NRR
Sbjct: 154 STGGDRYNLLLSQQRAQAVSNKLSGYGVEQVRLDTVGFGETQPIASNNTASGREQNRRVE 213
Query: 151 VFL 153
+ L
Sbjct: 214 LTL 216
>gi|330982864|gb|EGH80967.1| OmpA/MotB [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 137
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 52/124 (41%), Gaps = 2/124 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADE 91
LN + + GD V FD + ++P + L + E D ++EG+ D
Sbjct: 3 NSLNAKQTERGTLVTFGD-VLFDYNKAELKPTAQGDIGKLAGFLQENPDRKVIVEGYTDS 61
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
GS + + +L RRA +V V G+ +R+ YGKE P A NRR V
Sbjct: 62 TGSASYNQSLSERRANSVRMALVRMGVDPARIVTMGYGKEYPVADNSSNSGRAMNRRVEV 121
Query: 152 FLKG 155
+
Sbjct: 122 TISN 125
>gi|260891212|ref|ZP_05902475.1| OmpA family protein [Leptotrichia hofstadii F0254]
gi|260859239|gb|EEX73739.1| OmpA family protein [Leptotrichia hofstadii F0254]
Length = 172
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 64/167 (38%), Gaps = 17/167 (10%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVF-------- 53
+ S I +LS + + + + + T + + + + E ++V
Sbjct: 3 KKSKITAMLSVLLVSAPTTAKKITTSNLRDNAMRSTAIEVEGSELGELEAVKESADSDVV 62
Query: 54 --------FDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRR 105
FD +S +I+ L L ++E + I G+ D G+R + L LRR
Sbjct: 63 VLDANQLKFDFNSATIKEEYTPALKKLKDYIEAKNQKISIIGYTDSKGTREYNRELSLRR 122
Query: 106 AYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
A ++ + G+S R+ + G P E+ A NRR +
Sbjct: 123 AESLEEKLIDLGLSPERIIETKGNGDANPVATNDTEEGRAANRRIEI 169
>gi|108810029|ref|YP_653945.1| putative lipoprotein [Yersinia pestis Antiqua]
gi|108810484|ref|YP_646251.1| lipoprotein [Yersinia pestis Nepal516]
gi|145600441|ref|YP_001164517.1| lipoprotein [Yersinia pestis Pestoides F]
gi|165927314|ref|ZP_02223146.1| ompA family protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165936533|ref|ZP_02225101.1| ompA family protein [Yersinia pestis biovar Orientalis str. IP275]
gi|166009010|ref|ZP_02229908.1| ompA family protein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166212007|ref|ZP_02238042.1| ompA family protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|167418991|ref|ZP_02310744.1| ompA family protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167426023|ref|ZP_02317776.1| ompA family protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|270487963|ref|ZP_06205037.1| OmpA family protein [Yersinia pestis KIM D27]
gi|294502545|ref|YP_003566607.1| lipoprotein [Yersinia pestis Z176003]
gi|108774132|gb|ABG16651.1| lipoprotein [Yersinia pestis Nepal516]
gi|108781942|gb|ABG16000.1| putative lipoprotein [Yersinia pestis Antiqua]
gi|145212137|gb|ABP41544.1| lipoprotein [Yersinia pestis Pestoides F]
gi|165915649|gb|EDR34258.1| ompA family protein [Yersinia pestis biovar Orientalis str. IP275]
gi|165920776|gb|EDR38024.1| ompA family protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165992349|gb|EDR44650.1| ompA family protein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166206753|gb|EDR51233.1| ompA family protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|166962985|gb|EDR59006.1| ompA family protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167054946|gb|EDR64746.1| ompA family protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|270336467|gb|EFA47244.1| OmpA family protein [Yersinia pestis KIM D27]
gi|294353004|gb|ADE63345.1| lipoprotein [Yersinia pestis Z176003]
Length = 165
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 59/165 (35%), Gaps = 9/165 (5%)
Query: 1 MQYST----IFIILSAITMMSISGIDNLDTKISSPDTVLNESS----LQEQFSSSVGDSV 52
MQ I++ A+ +M + G ++ + + + + V
Sbjct: 1 MQNKRLIQRIWVSFLAMGLMLLVGCQAKPQGLTPDQIAALQEQGFKLTDNGWEFGLANKV 60
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFN 111
FD+ + +Q + +G L ++GH D +G + + L +RA AV +
Sbjct: 61 LFDSDVKKLNSEGMQTVQKIGRILSDVGIKHMRVDGHTDSVGKDDYNQQLSYQRALAVAD 120
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
GI S + V GK P A+NRR + +
Sbjct: 121 TLATVGIPKSNIDVRGRGKLEPVADNRTSKGRAENRRVAIIITAS 165
>gi|237744908|ref|ZP_04575389.1| outer membrane protein [Fusobacterium sp. 7_1]
gi|229432137|gb|EEO42349.1| outer membrane protein [Fusobacterium sp. 7_1]
Length = 166
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 3/128 (2%)
Query: 34 VLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG 93
L E +E ++ FD ++P ++L+NL ++EK+D + I GH D +
Sbjct: 18 ALKEEPPEEMTIVLDDRALNFDFDKSVVKPQYNEMLTNLKDFIEKNDYEVTIVGHTDYIA 77
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
S ++ L RRA AV + G+ SR+ + G+E P + AKNRR
Sbjct: 78 SNAYNMGLSKRRAEAVKAKLIELGLDPSRIVGIVPRGEEEPIADNATTEGRAKNRRVEFK 137
Query: 153 L--KGCRA 158
L +G +
Sbjct: 138 LVKRGSKG 145
>gi|259909069|ref|YP_002649425.1| peptidoglycan-associated outer membrane lipoprotein [Erwinia
pyrifoliae Ep1/96]
gi|292487662|ref|YP_003530535.1| peptidoglycan-associated lipoprotein [Erwinia amylovora CFBP1430]
gi|292898899|ref|YP_003538268.1| peptidoglycan-associated lipoprotein [Erwinia amylovora ATCC 49946]
gi|224964691|emb|CAX56208.1| Peptidoglycan-associated lipoprotein Pal, OmpA family of porins
[Erwinia pyrifoliae Ep1/96]
gi|283479095|emb|CAY75011.1| Peptidoglycan-associated lipoprotein precursor [Erwinia pyrifoliae
DSM 12163]
gi|291198747|emb|CBJ45856.1| peptidoglycan-associated lipoprotein precursor [Erwinia amylovora
ATCC 49946]
gi|291553082|emb|CBA20127.1| Peptidoglycan-associated lipoprotein precursor [Erwinia amylovora
CFBP1430]
gi|310767031|gb|ADP11981.1| peptidoglycan-associated outer membrane lipoprotein [Erwinia sp.
Ejp617]
gi|312171770|emb|CBX80028.1| Peptidoglycan-associated lipoprotein precursor [Erwinia amylovora
ATCC BAA-2158]
Length = 172
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 52/171 (30%), Positives = 84/171 (49%), Gaps = 19/171 (11%)
Query: 1 MQYSTIF----IILSAITMMSISGIDN--------------LDTKISSPDTVLNESSLQE 42
MQ + + + L I + + S N ++ ++S + +E + +
Sbjct: 1 MQLNKVLKGLMLALPVIAVAACSSHKNNNNDQTNGMGLDGSANSGMNSGNMSSDEQARLQ 60
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIAL 101
+ V+F Y I+ Q+L ++L + +EGHADE G+ +IAL
Sbjct: 61 MQELQKNNIVYFGLDKYDIQSDFAQMLDAHANFLRSNPSYKVTVEGHADERGTPEYNIAL 120
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
G RRA AV Y +G++ ++ + SYGKE P+V GHDE AYAKNRRA++
Sbjct: 121 GERRASAVKMYLQGKGVADDQISIVSYGKEKPAVLGHDESAYAKNRRAVLV 171
>gi|220933311|ref|YP_002512210.1| OmpA/MotB domain protein [Thioalkalivibrio sp. HL-EbGR7]
gi|219994621|gb|ACL71223.1| OmpA/MotB domain protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 218
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++ FD + ++ VL+++ L+K+D + GH D
Sbjct: 92 GTGVSVTRDGDNLILNMPGNITFDVNRDEVKSEFYPVLNSVAKVLKKYDKTAIEVAGHTD 151
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G+ ++AL LRRA +V Y + +GI R+ +G P + + NRR
Sbjct: 152 STGTVEHNMALSLRRADSVAGYLLGQGIQNVRIATIGFGPHRPIADNNTAQGRSLNRRVE 211
Query: 151 VFL 153
+ L
Sbjct: 212 LTL 214
>gi|330811620|ref|YP_004356082.1| lipoprotein [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|327379728|gb|AEA71078.1| Conserved hypothetical protein, putative lipoprotein [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 244
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 1/137 (0%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LE 77
+ + S +T + +Q + ++ F T S +I + Q L+NL + E
Sbjct: 87 ADQQEKKLRASMANTGVEVQRQGDQIKLIMPGNITFATDSANIASSFYQPLNNLANSLKE 146
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+ I G+ D GSR ++ L RRA +V Y ++G+S + + G + P
Sbjct: 147 FNQNQIEIVGYTDSTGSRQHNMDLSQRRAQSVATYLTSQGVSGANLSARGAGPDNPVASN 206
Query: 138 HDEDAYAKNRRAIVFLK 154
D + A+NRR V LK
Sbjct: 207 ADVNGRAQNRRVEVNLK 223
>gi|307826004|ref|ZP_07656218.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
gi|307732979|gb|EFO03842.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
Length = 266
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 36/120 (30%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELG 93
L + + ++GD V FDT+ ++ +Q + L +L+ H D IEGH D G
Sbjct: 131 LKAKKVPQGILVTLGD-VLFDTARSDLKAGSLQNIYPLVEYLKVHADTMVKIEGHTDNQG 189
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + L RRA AV N+ V G++ R+ GK+ P +NRR V +
Sbjct: 190 SSDYNAQLSQRRAEAVRNFLVTNGVAPERITAQGMGKDYPIATNSSAAGRQQNRRVEVTI 249
>gi|260494689|ref|ZP_05814819.1| peptidoglycan-associated lipoprotein [Fusobacterium sp. 3_1_33]
gi|260197851|gb|EEW95368.1| peptidoglycan-associated lipoprotein [Fusobacterium sp. 3_1_33]
Length = 166
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 3/128 (2%)
Query: 34 VLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG 93
L E +E ++ FD ++P ++L+NL ++EK+D + I GH D +
Sbjct: 18 ALKEEPPEEMTIVLDDRALNFDFDKSVVKPQYNEMLTNLKDFIEKNDYEVTIVGHTDYIA 77
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
S ++ L RRA AV + G+ SR+ + G+E P + AKNRR
Sbjct: 78 SNAYNMGLSKRRAEAVKTKLIELGLDPSRIVGIVPRGEEEPIADNATTEGRAKNRRVEFK 137
Query: 153 L--KGCRA 158
L +G +
Sbjct: 138 LVKRGSKG 145
>gi|261414988|ref|YP_003248671.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261371444|gb|ACX74189.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302326246|gb|ADL25447.1| ompA family protein [Fibrobacter succinogenes subsp. succinogenes
S85]
Length = 756
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
+ + F+ S + + L ++ + + ++GH D +G+ + + L RA
Sbjct: 541 LKKGIQFEFDSAKLLKSSYPTLDDIIALLEKIPEVKLEVQGHTDIVGTEDYNQKLSEDRA 600
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
++V +YF ++GI+A R++ +G MP ++ AKNRR +
Sbjct: 601 HSVTDYFQSKGIAADRLRAIGFGTRMPLADNVTDEGRAKNRRVELI 646
>gi|254483376|ref|ZP_05096606.1| OmpA family protein [marine gamma proteobacterium HTCC2148]
gi|214036360|gb|EEB77037.1| OmpA family protein [marine gamma proteobacterium HTCC2148]
Length = 214
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 1/134 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKH 79
+ K T + + + ++ F+T SY++R + VL+++G +
Sbjct: 76 VQEAKLKEELQGTGVQVVREGDNIRLIMPGNITFETDSYNLRSSFYSVLNSVGQVLSKYA 135
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
D + GH D GSR + L RRA +V +Y R + +RM V G + P
Sbjct: 136 DTTLRVSGHTDNTGSRQYNQTLSERRAGSVADYLATREVDRARMLVQGMGFDQPIADNGS 195
Query: 140 EDAYAKNRRAIVFL 153
A+NRR +++
Sbjct: 196 AAGRAQNRRVELYI 209
>gi|107099070|ref|ZP_01362988.1| hypothetical protein PaerPA_01000079 [Pseudomonas aeruginosa PACS2]
Length = 449
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 42/123 (34%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+ ++ ++ F ++S S+R +L + L K L+ GH+D
Sbjct: 321 VAVEDAVDRSVVTIRGDELFASASASVRDEFQPLLLRIADALRKVKGQVLVTGHSDNRPI 380
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
S+ L RA V + A A R P + A+NRR
Sbjct: 381 ATLRYPSNWKLSQARAQEVADLLGATTGDAGRFTAEGRSDTEPVASNASAEGRARNRRVE 440
Query: 151 VFL 153
+ +
Sbjct: 441 ITV 443
>gi|89070689|ref|ZP_01157958.1| OmpA family protein [Oceanicola granulosus HTCC2516]
gi|89043710|gb|EAR49914.1| OmpA family protein [Oceanicola granulosus HTCC2516]
Length = 229
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 1/115 (0%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSS 98
+ ++ + FDT S ++ + L+ L + GH D G + +
Sbjct: 111 TGDSLVVTLPQDILFDTDSATLSGSLQSDLNALARSLNNYPSTTITVIGHTDNTGEASYN 170
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RRA AV + ++ G+SA R+ G++ P ED +NRR + +
Sbjct: 171 QNLSRRRAQAVTSTLISSGVSAGRINTVGRGEDAPIATNLTEDGRRQNRRVEIII 225
>gi|254441790|ref|ZP_05055283.1| peptidoglycan-associated lipoprotein, putative [Octadecabacter
antarcticus 307]
gi|198251868|gb|EDY76183.1| peptidoglycan-associated lipoprotein, putative [Octadecabacter
antarcticus 307]
Length = 172
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 49/167 (29%), Positives = 83/167 (49%), Gaps = 13/167 (7%)
Query: 1 MQ-YSTIFIILSAITMMSIS-----------GIDNLDTKISSPDTVLNESSLQEQFSSSV 48
M+ + T + + + + + + G D + S ++ S + FS ++
Sbjct: 1 MKHFITAALFVGVLALSACTNADRFNNFNGDGQDGANNIDQSTLGGNDDPSSPQFFSQTI 60
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIALGLRRAY 107
GD V F + ++ L WL + +IEGHADE G+R ++ALG RRA
Sbjct: 61 GDRVMFAVDTSTLTAEGRNTLDGQSGWLSTNSDYLAVIEGHADEQGTREYNLALGARRAN 120
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
AV Y +++G+++SR++ SYGKE P +E YA+NRRA+ +
Sbjct: 121 AVREYLISKGLASSRIRTVSYGKERPIAVCSEESCYAQNRRALTIIS 167
>gi|261839857|gb|ACX99622.1| hypothetical protein HPKB_1056 [Helicobacter pylori 52]
Length = 179
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 38/177 (21%), Positives = 75/177 (42%), Gaps = 24/177 (13%)
Query: 1 MQYSTIFIILSAITMMSISG-------------IDNLDTKISSPDTVLNESSLQEQFSSS 47
M+ S++F L A +++ + T + + + +++ +
Sbjct: 1 MKRSSVFSFLVAFLLVAGCSHKMDNKTVAGDVSAKTVQTAPVTTEPAPEKEEPKQEPAPV 60
Query: 48 VGDS-----------VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRN 96
V + ++FD Y I+ +D + L + +++ L+EG+ DE GS
Sbjct: 61 VEEKPAIESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEFGSSE 120
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ ALG++R +V N V +G+ +K S+G+ P + Y +NRR V L
Sbjct: 121 YNQALGVKRTLSVKNALVIKGVEKDMIKTISFGETKPKCAQKTRECYKENRRVDVKL 177
>gi|119476294|ref|ZP_01616645.1| flagellar motor protein [marine gamma proteobacterium HTCC2143]
gi|119450158|gb|EAW31393.1| flagellar motor protein [marine gamma proteobacterium HTCC2143]
Length = 344
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 52/127 (40%), Gaps = 4/127 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ ++ + S+ F + ++ + VL ++ S L+ +EG D
Sbjct: 130 SNQVTVRGSEKWLEVELKSSLLFGSGDSTLSVPAVGVLESIASILKDQTNPIRVEGFTDN 189
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
S+ L RA AV +F+ G+SA R+ YG+ P E+ A+NR
Sbjct: 190 QPINSVRYPSNWELSAGRASAVVKFFIEEGLSADRLAAIGYGEHQPVTDNDSEEGRAENR 249
Query: 148 RAIVFLK 154
R ++ +
Sbjct: 250 RVVLMIS 256
>gi|299771293|ref|YP_003733319.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter sp. DR1]
gi|298701381|gb|ADI91946.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter sp. DR1]
Length = 217
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 62/146 (42%), Gaps = 1/146 (0%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
+L + + + + + + V + + S+ FDT+ +I+P
Sbjct: 68 VLGGASGLYLDQKEKKLRQQMAGTGVDVGRNPDGSVQLIMPGSITFDTNKSNIKPNFYST 127
Query: 69 LSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
L+ + L + + L+ G+ D G+ + +I L RA +V +Y ++G+SASR+
Sbjct: 128 LNKVAQTLAEDNKSAILVTGYTDNTGNDSINIPLSQARAQSVRSYLASQGVSASRIDAQG 187
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFL 153
+G P +NRR + +
Sbjct: 188 FGSSNPIADNSTATGREQNRRVEISI 213
>gi|114321225|ref|YP_742908.1| OmpA/MotB domain-containing protein [Alkalilimnicola ehrlichii
MLHE-1]
gi|114227619|gb|ABI57418.1| OmpA/MotB domain protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 251
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 54/137 (39%), Gaps = 4/137 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ ++ + ++ S + D + F + + +QVL L LE D
Sbjct: 111 QAMADELDALGDDIDVLVEAGSISFRISDEILFPSGEAELTDQGLQVLGQLIPVLEVSDH 170
Query: 82 DFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+EGH D + S+ L RA V + A GI+++R++ T P
Sbjct: 171 RITVEGHTDNVPIATERFPSNWELSTGRATRVLRFLEAEGIASTRLQATGLADTRPIAGN 230
Query: 138 HDEDAYAKNRRAIVFLK 154
+ A+NRR + L+
Sbjct: 231 ATAEGRAQNRRVELVLQ 247
>gi|332520949|ref|ZP_08397409.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
gi|332043479|gb|EGI79675.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
Length = 442
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
++ F+ S+ P + L + + + + F + GH D +GS+ +++AL +RA +V
Sbjct: 337 AIVFNYGKTSLSPEGKKALDEIYKIMNLQKNMKFHVTGHTDNVGSKATNLALSEKRAASV 396
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
NY + +GIS SR+ YG+E P + KNRR +++
Sbjct: 397 KNYLITKGISNSRVTSQGYGEENPIADNSTNEGRIKNRRIEIYI 440
>gi|325121211|gb|ADY80734.1| OmpA domain protein [Acinetobacter calcoaceticus PHEA-2]
Length = 217
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 62/146 (42%), Gaps = 1/146 (0%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
+L A + + + + + V + + S+ FDT+ +I+P
Sbjct: 68 VLGAAGGVYLDQKEKKLRQQMAGTGVDVGRNPDGSVQLIMPGSITFDTNKSNIKPNFYAT 127
Query: 69 LSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
L+ + L + + L+ G+ D G+ + +I L RA +V +Y ++G+SASR+
Sbjct: 128 LNKVAQTLAEDNKSAILVTGYTDNTGNDSINIPLSQARAQSVRSYLASQGVSASRIDAQG 187
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFL 153
YG P +NRR + +
Sbjct: 188 YGSSNPIADNSTASGREQNRRVEISI 213
>gi|304395720|ref|ZP_07377603.1| peptidoglycan-associated lipoprotein [Pantoea sp. aB]
gi|308186084|ref|YP_003930215.1| Peptidoglycan-associated lipoprotein precursor [Pantoea vagans
C9-1]
gi|304357014|gb|EFM21378.1| peptidoglycan-associated lipoprotein [Pantoea sp. aB]
gi|308056594|gb|ADO08766.1| Peptidoglycan-associated lipoprotein precursor [Pantoea vagans
C9-1]
Length = 175
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 52/174 (29%), Positives = 81/174 (46%), Gaps = 22/174 (12%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDT-----------------VLNESS 39
MQ + + + L + + + S N + + +E +
Sbjct: 1 MQLNKVLKGLMLALPVLAVAACSSHKNNNNDQTGMGADGAYGANSGMNGNGGNMSSDEQA 60
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSS 98
+ + V+F Y ++ Q+L ++L + IEGHADE G+ +
Sbjct: 61 RLQMQQLQQNNIVYFGLDKYDVQSDYAQMLDQHATFLRSNPSYKVTIEGHADERGTPEYN 120
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
IALG RRA AV Y +G+SA +M + SYGKE P+V GHDE AY+KNRRA++
Sbjct: 121 IALGERRANAVKMYLQGKGVSADQMSIVSYGKEKPAVLGHDEAAYSKNRRAVLV 174
>gi|304393352|ref|ZP_07375280.1| outer membrane lipoprotein Omp16 [Ahrensia sp. R2A130]
gi|303294359|gb|EFL88731.1| outer membrane lipoprotein Omp16 [Ahrensia sp. R2A130]
Length = 174
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 49/158 (31%), Positives = 81/158 (51%), Gaps = 9/158 (5%)
Query: 8 IILSAITMMSISGIDNLDTKISSPD--------TVLNESSLQEQFSSSVGDSVFFDTSSY 59
+I+S +++++G + + T + + F+ +VGD VFF T S
Sbjct: 15 LIVSLSALVAVTGCSRKKPLPDNANQLGLGNGNTNGAAAGSTQDFTVNVGDRVFFTTDST 74
Query: 60 SIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI 118
S+ L +W + ++EGHADE G+R ++ALG RRA A +Y VARG+
Sbjct: 75 SLTGDARATLDKQATWLSRYGNYSIVVEGHADERGTREYNLALGARRAAATRDYLVARGV 134
Query: 119 SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
+ R++ S+GKE P +D +++NRRA+ L G
Sbjct: 135 NRGRIRTISFGKERPVAVCNDISCFSQNRRAVTVLGGS 172
>gi|255530915|ref|YP_003091287.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366]
gi|255343899|gb|ACU03225.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366]
Length = 175
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 33/172 (19%), Positives = 70/172 (40%), Gaps = 20/172 (11%)
Query: 1 MQY--STIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG--------- 49
M++ +++F+ + + +S+ ++E+
Sbjct: 1 MKFLRTSLFLAVIGLLAISVQSCKTKKVIAKPVPVEKPAPVVEEKKPEPAPEPKPEPVPV 60
Query: 50 --------DSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIA 100
+V F+ +S ++ A +VL + + ++K F++ GH+ GS +++
Sbjct: 61 EEKPNYNFSNVQFEFNSGVLKTASFEVLDRIAAEMKKDPAVKFVLNGHSSIEGSAAHNMS 120
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
L + RA +V Y V G+SA+ + + YG P E+ A+NRR
Sbjct: 121 LSVDRANSVKLYLVNAGVSAANLSIKGYGATQPVASNSTEEGKAQNRRVEFK 172
>gi|262193395|ref|YP_003264604.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
gi|262076742|gb|ACY12711.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
Length = 458
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 51/138 (36%), Gaps = 2/138 (1%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIR-PADIQVLSNLGSW- 75
D D +E + V + + F + S IR ++L ++ +
Sbjct: 300 CPNRAETDNGFEDEDGCPDEVPTRVAEYIGVLEGIRFPSGSAKIRDRRSRRILGDVAATL 359
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
E I GH D+ G ++ L RA AV + V +GI +R+ YG E P
Sbjct: 360 AEYPSVRVRISGHTDDRGRAEKNVQLSRERADAVKWFLVDKGIEHTRIVTAGYGPERPLA 419
Query: 136 YGHDEDAYAKNRRAIVFL 153
AKNRR L
Sbjct: 420 DNGTRAGRAKNRRIEFEL 437
>gi|237728863|ref|ZP_04559344.1| OmpA/MotB domain-containing protein [Citrobacter sp. 30_2]
gi|226909485|gb|EEH95403.1| OmpA/MotB domain-containing protein [Citrobacter sp. 30_2]
Length = 220
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 64/125 (51%), Gaps = 1/125 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHA 89
T ++ + + ++ ++V FD+SS +++PA L+ + L++++ + G
Sbjct: 93 QGTGVSVTRSGDNIILNMPNNVTFDSSSANLKPAGANTLTGVAMVLKEYNKTAVNVLGFT 152
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GS++ ++ L +RA +V + + +G++A+R++ G P + A+NRR
Sbjct: 153 DSTGSQDLNMRLSQQRADSVASALITQGVAANRIRTQGMGPANPIASNSTAEGKAQNRRV 212
Query: 150 IVFLK 154
+ L
Sbjct: 213 EITLS 217
>gi|99082288|ref|YP_614442.1| OmpA/MotB [Ruegeria sp. TM1040]
gi|99038568|gb|ABF65180.1| OmpA/MotB [Ruegeria sp. TM1040]
Length = 221
Score = 81.4 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHAD 90
+ ++ + ++ S+ + + F T S +I L + L+++ + + GH D
Sbjct: 94 NDSISIVNTGDRLIVSLPNDLTFATDSAAISSVVRSDLRKVAGSLQRYPGSIVQVIGHTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G+ + + +L RRA AV + A G+S RM++ G++ P + A+NRR
Sbjct: 154 SDGAASYNYSLSERRANAVADEIAAGGVSYGRMRIIGRGEDQPVASNLTPEGKARNRRVE 213
Query: 151 VFL 153
+ +
Sbjct: 214 IVI 216
>gi|317014512|gb|ADU81948.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
Gambia94/24]
Length = 179
Score = 81.0 bits (198), Expect = 4e-14, Method: Composition-based stats.
Identities = 38/177 (21%), Positives = 75/177 (42%), Gaps = 24/177 (13%)
Query: 1 MQYSTIFIILSAITMMSISG-------------IDNLDTKISSPDTVLNESSLQEQFSSS 47
M+ S++F L A +++ + T + + + +++ +
Sbjct: 1 MKRSSVFSFLVAFLLVAGCSHKMDNKTVAGDVSAKTVQTAPVTTEPAPEKEEPKQEPAPV 60
Query: 48 VGDS-----------VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRN 96
V + ++FD Y I+ +D + L + +++ L+EG+ DE GS
Sbjct: 61 VEEKPAIESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEFGSSE 120
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ ALG++R +V N V +G+ +K S+G+ P + Y +NRR V L
Sbjct: 121 YNQALGVKRTLSVKNALVIKGVEKDMIKTISFGETKPKCVQKTRECYRENRRVDVKL 177
>gi|296390172|ref|ZP_06879647.1| flagellar motor protein MotD [Pseudomonas aeruginosa PAb1]
Length = 296
Score = 81.0 bits (198), Expect = 4e-14, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 46/128 (35%), Gaps = 4/128 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
L+ + ++ S+ F + A ++ + L + +EG D
Sbjct: 114 ASDQLSVRGNELWIEITLNSSLLFPSGDALPNDAAFDIVEKVAKILAPYKNPIHVEGFTD 173
Query: 91 ELGSR----NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
++ ++ L RA ++ G+ SRM YG+ P + AKN
Sbjct: 174 DVPIHSPRYPTNWELSAARAASIVRLLGNDGVEPSRMAAVGYGEFQPVADNASAEGRAKN 233
Query: 147 RRAIVFLK 154
RR ++ +
Sbjct: 234 RRVVLVIS 241
>gi|218892666|ref|YP_002441535.1| flagellar motor protein MotD [Pseudomonas aeruginosa LESB58]
gi|218772894|emb|CAW28706.1| MotD [Pseudomonas aeruginosa LESB58]
Length = 296
Score = 81.0 bits (198), Expect = 4e-14, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 46/128 (35%), Gaps = 4/128 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
L+ + ++ S+ F + A ++ + L + +EG D
Sbjct: 114 ASDQLSVRGNELWIEITLNSSLLFPSGDALPNDAAFDIVEKVAKILAPYKNPIHVEGFTD 173
Query: 91 ELGSR----NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
++ ++ L RA ++ G+ SRM YG+ P + AKN
Sbjct: 174 DVPIHSPRYPTNWELSAARAASIVRLLGNDGVEPSRMAAVGYGEFQPVADNASAEGRAKN 233
Query: 147 RRAIVFLK 154
RR ++ +
Sbjct: 234 RRVVLVIS 241
>gi|157373855|ref|YP_001472455.1| OmpA/MotB domain-containing protein [Shewanella sediminis HAW-EB3]
gi|157316229|gb|ABV35327.1| OmpA/MotB domain protein [Shewanella sediminis HAW-EB3]
Length = 226
Score = 81.0 bits (198), Expect = 4e-14, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 55/135 (40%), Gaps = 1/135 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH- 79
+ + T ++ + + ++ + V F + +VL+++ +++
Sbjct: 87 TQEAELRKQLQSTGVSVTRSGDNIVLNMPNEVTFGVDQTDLSSGAKRVLNSVALVAKEYD 146
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ G+ D G+ + ++ L RA V NY VA+ I R+K G+ P
Sbjct: 147 QTQLNVLGYTDSSGAESYNLRLSKIRAIEVGNYLVAQKIEYGRVKSEGLGESRPIATNAT 206
Query: 140 EDAYAKNRRAIVFLK 154
+ A+NRR + L
Sbjct: 207 AEGRAQNRRVEIVLS 221
>gi|86750700|ref|YP_487196.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
gi|86573728|gb|ABD08285.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
Length = 451
Score = 81.0 bits (198), Expect = 4e-14, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 47/124 (37%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHAD 90
E+ + + + F S I A + VL L + + GH D
Sbjct: 328 SIPSVEACQSKLSTLVAAQKINFMRGSAEIAQASLPVLKQLAEVIAHCPAATIEVAGHTD 387
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + ++ AL RRA AV + GI ++++ YG P D AKNRR
Sbjct: 388 AAGKKAANEALSKRRAEAVADNLTKAGIGSAKLTAVGYGASKPLAANDSADGRAKNRRIE 447
Query: 151 VFLK 154
+K
Sbjct: 448 FVVK 451
>gi|91227603|ref|ZP_01261907.1| peptidoglycan-associated lipoprotein [Vibrio alginolyticus 12G01]
gi|262394683|ref|YP_003286537.1| OmpA [Vibrio sp. Ex25]
gi|269967693|ref|ZP_06181743.1| peptidoglycan-associated lipoprotein [Vibrio alginolyticus 40B]
gi|91188496|gb|EAS74789.1| peptidoglycan-associated lipoprotein [Vibrio alginolyticus 12G01]
gi|262338277|gb|ACY52072.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio sp.
Ex25]
gi|269827780|gb|EEZ82064.1| peptidoglycan-associated lipoprotein [Vibrio alginolyticus 40B]
Length = 174
Score = 81.0 bits (198), Expect = 4e-14, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 84/173 (48%), Gaps = 21/173 (12%)
Query: 1 MQYSTIFI-ILSAITMMSISGIDNLDTKISSPDTVLNESSLQE----------------- 42
MQ + + +L A+ +M+++ + D S+ N + E
Sbjct: 1 MQLNKVLKGLLIALPVMAVTACSSSDDAASNTGAATNNNGAVETTVATPIDQSGQLTEQE 60
Query: 43 --QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSI 99
+ + +++F + +I ++L+ S+ + + IEGHADE G+ +I
Sbjct: 61 LKEQALRETQTIYFAFDNSTIAADYEEMLAAHASYLSKNPALNVTIEGHADERGTPEYNI 120
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
ALG RRA AV NY A G+ A ++ + SYG+E P + G ++ YAKNRRA++
Sbjct: 121 ALGERRAQAVANYLQALGVQADQISIVSYGEEKPLLLGQSDEVYAKNRRAVLV 173
>gi|15645739|ref|NP_207916.1| peptidoglycan associated lipoprotein precursor (omp18)
[Helicobacter pylori 26695]
gi|2314278|gb|AAD08169.1| peptidoglycan associated lipoprotein precursor (omp18)
[Helicobacter pylori 26695]
Length = 179
Score = 81.0 bits (198), Expect = 4e-14, Method: Composition-based stats.
Identities = 38/178 (21%), Positives = 75/178 (42%), Gaps = 24/178 (13%)
Query: 1 MQYSTIFIILSAITMMSISG-------------IDNLDTKISSPDTVLNESSLQEQFSSS 47
M+ S++F L A +++ + T + + + +++ +
Sbjct: 1 MKRSSVFSFLVAFLLVAGCSHKMDNKTVAGDVSAKTVQTAPVTTEPAPEKEEPKQEPAPV 60
Query: 48 VGDS-----------VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRN 96
V + ++FD Y I+ +D + L + +++ L+EG+ DE GS
Sbjct: 61 VEEKPAVESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEFGSSE 120
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ ALG++R +V N V +G+ +K S+G+ P + Y +NRR V L
Sbjct: 121 YNQALGVKRTLSVKNALVIKGVEKDMIKTISFGETKPKCAQKTRECYKENRRVDVKLM 178
>gi|15596658|ref|NP_250152.1| flagellar motor protein MotD [Pseudomonas aeruginosa PAO1]
gi|107100895|ref|ZP_01364813.1| hypothetical protein PaerPA_01001925 [Pseudomonas aeruginosa PACS2]
gi|116049406|ref|YP_791791.1| flagellar motor protein MotD [Pseudomonas aeruginosa UCBPP-PA14]
gi|254234559|ref|ZP_04927882.1| MotD [Pseudomonas aeruginosa C3719]
gi|254239810|ref|ZP_04933132.1| MotD [Pseudomonas aeruginosa 2192]
gi|313106460|ref|ZP_07792691.1| chemotaxis protein, MotD [Pseudomonas aeruginosa 39016]
gi|9947413|gb|AAG04850.1|AE004575_9 MotD [Pseudomonas aeruginosa PAO1]
gi|3721573|dbj|BAA33552.1| ORF2 [Pseudomonas aeruginosa]
gi|115584627|gb|ABJ10642.1| chemotaxis protein, MotD [Pseudomonas aeruginosa UCBPP-PA14]
gi|126166490|gb|EAZ52001.1| MotD [Pseudomonas aeruginosa C3719]
gi|126193188|gb|EAZ57251.1| MotD [Pseudomonas aeruginosa 2192]
gi|310879193|gb|EFQ37787.1| chemotaxis protein, MotD [Pseudomonas aeruginosa 39016]
Length = 296
Score = 81.0 bits (198), Expect = 4e-14, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 46/128 (35%), Gaps = 4/128 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
L+ + ++ S+ F + A ++ + L + +EG D
Sbjct: 114 ASDQLSVRGNELWIEITLNSSLLFPSGDALPNDAAFDIVEKVAKILAPYKNPIHVEGFTD 173
Query: 91 ELGSR----NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
++ ++ L RA ++ G+ SRM YG+ P + AKN
Sbjct: 174 DVPIHSPRYPTNWELSAARAASIVRLLGNDGVEPSRMAAVGYGEFQPVADNASAEGRAKN 233
Query: 147 RRAIVFLK 154
RR ++ +
Sbjct: 234 RRVVLVIS 241
>gi|332667773|ref|YP_004450561.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332336587|gb|AEE53688.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 603
Score = 81.0 bits (198), Expect = 4e-14, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 47/114 (41%), Gaps = 1/114 (0%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRNSSI 99
+ V F T S + P+ ++L + + I+GH D G + ++
Sbjct: 486 DQAVLLRAKKEVRFKTGSAILLPSSKKILDQVAALMNRYPAYKLDIQGHTDSQGKEDFNL 545
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+L +RA + ++Y + R I A R++ +G+ P +NRR L
Sbjct: 546 SLSKKRAKSCYDYLLLRSIDAKRIEHEGFGETKPIASNKTPQGRVQNRRVEFVL 599
>gi|306820526|ref|ZP_07454159.1| outer membrane porin F [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304551440|gb|EFM39398.1| outer membrane porin F [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 432
Score = 81.0 bits (198), Expect = 4e-14, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 51/140 (36%), Gaps = 2/140 (1%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
++ ++ + + V FD + Y IR VL L
Sbjct: 291 LVDAEPLEKAGKLPTLSPIPAVPPIEANSVMIKLDSGVLFDVNKYDIREDANDVLMKLID 350
Query: 75 WLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
L+K F I GH D + + L RA +V ++ V GI+A + +G++ P
Sbjct: 351 VLKKAKVEKFEIYGHTDSDDTDEYNQVLSENRANSVKDFLVKNGITA-NIATKGFGEKKP 409
Query: 134 SVYGHDEDAYAKNRRAIVFL 153
++ NRR + +
Sbjct: 410 IATNSTKEGKQLNRRVEIII 429
>gi|311106926|ref|YP_003979779.1| OmpA family protein 3 [Achromobacter xylosoxidans A8]
gi|310761615|gb|ADP17064.1| OmpA family protein 3 [Achromobacter xylosoxidans A8]
Length = 199
Score = 81.0 bits (198), Expect = 4e-14, Method: Composition-based stats.
Identities = 37/151 (24%), Positives = 62/151 (41%), Gaps = 7/151 (4%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVL 69
L + IS ++ +++ L+ + + ++ V FD +IRPA L
Sbjct: 46 LPSDASGGISDLNAQIDGLAARHDGLSVRQDKNAVTVAMLGDVLFDFDKTAIRPAAEPTL 105
Query: 70 SNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
++ S ++ IEGH D GS + + L LRRA AV + + G+ +R+ V
Sbjct: 106 RDIASLIKASSAGTVAIEGHTDSKGSASYNKDLSLRRAQAVAQWLTSHGVDKARLTVKGL 165
Query: 129 GKEMPSVYG------HDEDAYAKNRRAIVFL 153
G P + A+NRR L
Sbjct: 166 GDTQPIQSNRLANGADNPQGRAQNRRVEFVL 196
>gi|157962384|ref|YP_001502418.1| peptidoglycan-associated lipoprotein [Shewanella pealeana ATCC
700345]
gi|157847384|gb|ABV87883.1| Peptidoglycan-associated lipoprotein [Shewanella pealeana ATCC
700345]
Length = 179
Score = 81.0 bits (198), Expect = 4e-14, Method: Composition-based stats.
Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 22/172 (12%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKI---------------------SSPDTVLNESSLQ 41
+ + ++L + + + S +T +P E
Sbjct: 7 FKAMLVVLPIMAISACSSTSESETDATSSTESSSSSEYANNGVETGGVAPVLTPQEQQRL 66
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIA 100
+ ++FD S+ ++L G + +E + +IEGHADE G+ +IA
Sbjct: 67 KYQELRKEHIIYFDFDRSSVSQQFAEILDAHGDYLVEHPNVRVMIEGHADERGTPEYNIA 126
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
LG RRA AV Y G+ S+M + SYG+E P + +D +AKNRRA++
Sbjct: 127 LGERRAKAVAKYLQGMGVQPSQMSIVSYGEEKPLDFSRSDDGFAKNRRAVLV 178
>gi|114771185|ref|ZP_01448605.1| OmpA/MotB family protein [alpha proteobacterium HTCC2255]
gi|114548110|gb|EAU50997.1| OmpA/MotB family protein [alpha proteobacterium HTCC2255]
Length = 163
Score = 81.0 bits (198), Expect = 4e-14, Method: Composition-based stats.
Identities = 44/120 (36%), Positives = 68/120 (56%), Gaps = 1/120 (0%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSR 95
+ + E F+ +GD+V F S+ +L+ WL + IEGHADE G+R
Sbjct: 40 DPAGVEYFNQEIGDTVLFLVDQSSLTAEATDLLNKQAEWLLNNPNKSITIEGHADETGTR 99
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
++ALG RRA +V NY V+RG++ SR+ ++GKE P DE ++KNRR++ + G
Sbjct: 100 EYNLALGARRAASVQNYLVSRGLTDSRINTVTFGKERPLAICSDEACWSKNRRSVTLVAG 159
>gi|88798412|ref|ZP_01113997.1| OmpA/MotB [Reinekea sp. MED297]
gi|88778852|gb|EAR10042.1| OmpA/MotB [Reinekea sp. MED297]
Length = 373
Score = 81.0 bits (198), Expect = 4e-14, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 1/108 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
D++ F S + L + + D + IE H D S +++L +RA A
Sbjct: 251 DAIQFAVDSAQLNDTSRVRLQEAANTLRQFPDINIQIEAHTDSTASEAYNLSLSDQRAQA 310
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
+ +Y + GI R+ T YG+ P E+ + NRR ++
Sbjct: 311 IRDYLIELGIDEQRLTATGYGESQPRASNESEEGRSLNRRVEFRMEDT 358
>gi|330503542|ref|YP_004380411.1| OmpF family protein [Pseudomonas mendocina NK-01]
gi|328917828|gb|AEB58659.1| OmpF family protein [Pseudomonas mendocina NK-01]
Length = 326
Score = 81.0 bits (198), Expect = 4e-14, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 2/106 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
V FD ++ + NL ++ + +EGH D +GS + L RRA AV
Sbjct: 216 DVKFDFDKDRVKEESYGDIKNLADFMNQYPQTTTTVEGHTDSVGSDAYNQGLSERRANAV 275
Query: 110 FNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
N V + + SR+ YG+ P + A NRR ++
Sbjct: 276 RNVLVNQYGVDGSRVNAVGYGETRPVADNATDSGRAINRRVEAEVE 321
>gi|119944065|ref|YP_941745.1| OmpA/MotB domain-containing protein [Psychromonas ingrahamii 37]
gi|119862669|gb|ABM02146.1| OmpA/MotB domain protein [Psychromonas ingrahamii 37]
Length = 215
Score = 81.0 bits (198), Expect = 4e-14, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 1/112 (0%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIAL 101
+ + D + FDT +Y + + L+ + E I GH D +GS S++ L
Sbjct: 101 ELQLIMADGIGFDTGNYQLSGSIFSTLNGVAKVLNEYPKSSLRIIGHTDSVGSSESNLTL 160
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RRA +V NY + R + + R+ YG+ P A NRR + +
Sbjct: 161 SERRAESVSNYLMQRNVKSGRLSTLGYGERRPIATNDTPYGRAANRRVEINI 212
>gi|108524622|ref|YP_619844.1| hypothetical protein pQKH54_47 [Plasmid QKH54]
gi|99644193|emb|CAJ43326.1| hypothetical protein [Plasmid QKH54]
Length = 220
Score = 81.0 bits (198), Expect = 4e-14, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG-SWLEKHDCDFLIEGHAD 90
+ + +Q + S+ F T I+P+ L+ L S+ + D D ++ GH D
Sbjct: 88 GSGVEVEREGDQLKLVMPGSITFATGKSEIQPSFQYTLNQLAASFRQFQDSDLIVTGHTD 147
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
+GS ++ L RRA +V + + G+ SR++ G P + A+NRR
Sbjct: 148 SVGSYEANQVLSARRADSVSQFLRSNGVDPSRLQTFGAGSSSPIAPNDTTEGRAQNRRVE 207
Query: 151 VFL 153
+ L
Sbjct: 208 IKL 210
>gi|146276615|ref|YP_001166774.1| OmpA domain-containing protein [Rhodobacter sphaeroides ATCC 17025]
gi|145554856|gb|ABP69469.1| OmpA domain protein [Rhodobacter sphaeroides ATCC 17025]
Length = 182
Score = 81.0 bits (198), Expect = 4e-14, Method: Composition-based stats.
Identities = 47/123 (38%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADE 91
++ F ++GD VFF ++ + L W + D +IEGHADE
Sbjct: 55 GGPSDPRSIAYFQQTLGDRVFFLVDQSTLNDSARTTLDTQSQWLMANADYAIIIEGHADE 114
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
G+R ++ALG RRA AV +Y +++GI+ SRMK SYGKE P E+ Y+KNRRA+
Sbjct: 115 QGTREYNLALGARRASAVQDYLISKGIAPSRMKTVSYGKERPVEVCSTEECYSKNRRAVT 174
Query: 152 FLK 154
L
Sbjct: 175 VLS 177
>gi|196248997|ref|ZP_03147697.1| OmpA/MotB domain protein [Geobacillus sp. G11MC16]
gi|196211873|gb|EDY06632.1| OmpA/MotB domain protein [Geobacillus sp. G11MC16]
Length = 191
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 46/128 (35%), Gaps = 6/128 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
L S +E + ++ D + FD+ S +R D ++ S + + + + +I GH D
Sbjct: 50 GGKLQTSLTEEGLAITILDDILFDSGSAEVRMKDRRLASEVAALLVMNPPRNVIISGHTD 109
Query: 91 ELGSRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ N+ A R + + + YG+ P K
Sbjct: 110 NVPIHNAQFASNWELSVMRAVNFMKVLLENKQLDPRYFSAKGYGEYKPIASNETAAGRMK 169
Query: 146 NRRAIVFL 153
NRR + +
Sbjct: 170 NRRVEILI 177
>gi|58866398|gb|AAW82963.1| Omp52 [Leptospira santarosai serovar Shermani]
Length = 456
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 50/134 (37%), Gaps = 3/134 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
S + +E + S+ +SV FD +S ++ L + S L+K++
Sbjct: 321 KTKPETAKSSGPPVEIRRTEEGIAISL-NSVLFDHNSSQLKDEAKLELKKIASVLKKYED 379
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFV-ARGISASRMKVTSYGKEMPSVYGHD 139
I GH D G + L RA +V +G+ RM YGK P
Sbjct: 380 REIRISGHTDNSGGDEYNRKLSRERALSVLKELRDEQGLEEKRMSYEGYGKSKPIADNST 439
Query: 140 EDAYAKNRRAIVFL 153
KNRR + +
Sbjct: 440 IQGRQKNRRVDITI 453
>gi|307728550|ref|YP_003905774.1| peptidoglycan-associated lipoprotein [Burkholderia sp. CCGE1003]
gi|323524837|ref|YP_004226990.1| peptidoglycan-associated lipoprotein [Burkholderia sp. CCGE1001]
gi|307583085|gb|ADN56483.1| peptidoglycan-associated lipoprotein [Burkholderia sp. CCGE1003]
gi|323381839|gb|ADX53930.1| peptidoglycan-associated lipoprotein [Burkholderia sp. CCGE1001]
Length = 169
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 12/163 (7%)
Query: 2 QYSTIFIILSAITMMSI-------SGIDNLDTKISSPDT----VLNESSLQEQFSSSVGD 50
+ F +L + + + + P+ +N L + S
Sbjct: 4 KLRFAFAVLMVGALAACHSGVKLDENANKGGAVSTQPNPNDVAQVNVDPLNDPNSPLAKR 63
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAV 109
S++FD SYS++ +L +L+ H LI+G+ DE G+ ++ALG +RA AV
Sbjct: 64 SIYFDFDSYSVKDDYQSLLQQHAQYLKSHPQRHVLIQGNTDERGTSEYNLALGQKRAEAV 123
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
G++ S+M+ S GKE P GHDE ++A+NRRA +
Sbjct: 124 RRSLSLMGVTDSQMEAVSLGKEKPQATGHDESSWAQNRRADLV 166
>gi|22127605|ref|NP_671028.1| outer membrane protein [Yersinia pestis KIM 10]
gi|45443467|ref|NP_995006.1| putative lipoprotein [Yersinia pestis biovar Microtus str. 91001]
gi|150260516|ref|ZP_01917244.1| putative lipoprotein [Yersinia pestis CA88-4125]
gi|153949584|ref|YP_001402443.1| ompA family protein [Yersinia pseudotuberculosis IP 31758]
gi|162419496|ref|YP_001605396.1| ompA family protein [Yersinia pestis Angola]
gi|167401635|ref|ZP_02307129.1| ompA family protein [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167468843|ref|ZP_02333547.1| ompA family protein [Yersinia pestis FV-1]
gi|170025832|ref|YP_001722337.1| OmpA/MotB domain-containing protein [Yersinia pseudotuberculosis
YPIII]
gi|218927645|ref|YP_002345520.1| putative lipoprotein [Yersinia pestis CO92]
gi|229836972|ref|ZP_04457137.1| putative lipoprotein [Yersinia pestis Pestoides A]
gi|229840332|ref|ZP_04460491.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229842412|ref|ZP_04462567.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. India
195]
gi|229900672|ref|ZP_04515796.1| putative lipoprotein [Yersinia pestis Nepal516]
gi|21960714|gb|AAM87279.1|AE013976_7 putative outer membrane protein [Yersinia pestis KIM 10]
gi|45438336|gb|AAS63883.1| putative lipoprotein [Yersinia pestis biovar Microtus str. 91001]
gi|115346256|emb|CAL19127.1| putative lipoprotein [Yersinia pestis CO92]
gi|149289924|gb|EDM40001.1| putative lipoprotein [Yersinia pestis CA88-4125]
gi|152961079|gb|ABS48540.1| ompA family protein [Yersinia pseudotuberculosis IP 31758]
gi|162352311|gb|ABX86259.1| ompA family protein [Yersinia pestis Angola]
gi|167049017|gb|EDR60425.1| ompA family protein [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|169752366|gb|ACA69884.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis YPIII]
gi|229682011|gb|EEO78103.1| putative lipoprotein [Yersinia pestis Nepal516]
gi|229690722|gb|EEO82776.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. India
195]
gi|229696698|gb|EEO86745.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229705915|gb|EEO91924.1| putative lipoprotein [Yersinia pestis Pestoides A]
gi|262360575|gb|ACY57296.1| putative lipoprotein [Yersinia pestis D106004]
gi|262364521|gb|ACY61078.1| putative lipoprotein [Yersinia pestis D182038]
gi|320016989|gb|ADW00561.1| putative lipoprotein [Yersinia pestis biovar Medievalis str. Harbin
35]
Length = 168
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 59/165 (35%), Gaps = 9/165 (5%)
Query: 1 MQYST----IFIILSAITMMSISGIDNLDTKISSPDTVLNESS----LQEQFSSSVGDSV 52
MQ I++ A+ +M + G ++ + + + + V
Sbjct: 4 MQNKRLIQRIWVSFLAMGLMLLVGCQAKPQGLTPDQIAALQEQGFKLTDNGWEFGLANKV 63
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFN 111
FD+ + +Q + +G L ++GH D +G + + L +RA AV +
Sbjct: 64 LFDSDVKKLNSEGMQTVQKIGRILSDVGIKHMRVDGHTDSVGKDDYNQQLSYQRALAVAD 123
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
GI S + V GK P A+NRR + +
Sbjct: 124 TLATVGIPKSNIDVRGRGKLEPVADNRTSKGRAENRRVAIIITAS 168
>gi|260779147|ref|ZP_05888039.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
coralliilyticus ATCC BAA-450]
gi|260605311|gb|EEX31606.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
coralliilyticus ATCC BAA-450]
Length = 179
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 28/179 (15%)
Query: 1 MQYST----IFIILSAITMMSIS----------------------GIDNLDTKISSPDTV 34
MQ + + I L + + + S G+D +
Sbjct: 1 MQLNKVLKGLLIALPVLAVTACSSSDDAANASGSETNQSTSGSANGVDTTVVSPIGENGQ 60
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELG 93
L+E L+EQ + +++F + +I ++L+ + + IEGHADE G
Sbjct: 61 LSEQELKEQ-ALRESQTIYFAFDNATIAGDYEEMLAAHAAYLSKNPALKVTIEGHADERG 119
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ +IALG RRA AV Y A G+ A ++ + SYG+E P + G ED YAKNRRA++
Sbjct: 120 TPEYNIALGERRATAVAKYLQALGVQADQISIVSYGEEKPLLLGQSEDVYAKNRRAVLV 178
>gi|206580983|ref|YP_002237058.1| OmpA family protein [Klebsiella pneumoniae 342]
gi|288934021|ref|YP_003438080.1| OmpA/MotB domain protein [Klebsiella variicola At-22]
gi|290510919|ref|ZP_06550288.1| lipoprotein yfiB [Klebsiella sp. 1_1_55]
gi|206570041|gb|ACI11817.1| OmpA family protein [Klebsiella pneumoniae 342]
gi|288888750|gb|ADC57068.1| OmpA/MotB domain protein [Klebsiella variicola At-22]
gi|289775912|gb|EFD83911.1| lipoprotein yfiB [Klebsiella sp. 1_1_55]
Length = 160
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 33/158 (20%), Positives = 58/158 (36%), Gaps = 4/158 (2%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLD--TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSS 58
M L A +++ + + + +S + DS+ FD +
Sbjct: 1 MLRKYFVPALMAAALLTGCQAPQGKFTPEQVAAMKSYGFTESNGDWSLGLSDSILFDKND 60
Query: 59 YSIRPADIQVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARG 117
Y +RP Q ++ + S L +EGH D G + + AL L+RA +V + +
Sbjct: 61 YRLRPDSRQQITTMASRLAATGITHSRLEGHTDNYGEDSYNEALSLKRANSVADAWAEGA 120
Query: 118 ISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ GK+ P A+NRR V +
Sbjct: 121 HVPRSHLVTRGLGKKYPIASNDTAAGRAENRRVTVVIS 158
>gi|253701505|ref|YP_003022694.1| OmpA/MotB domain protein [Geobacter sp. M21]
gi|251776355|gb|ACT18936.1| OmpA/MotB domain protein [Geobacter sp. M21]
Length = 466
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 2/134 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ P V + + + FD IRP + ++ +G++++K+
Sbjct: 203 AAVTPAPEPPLEVPAAEPTPDHYKYCITLQGEFDIDKAIIRPEYKEEIAQVGNFMKKYPT 262
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHD 139
+IEGH D +GS N + L RRA AV N+ V + I SR+ YG P
Sbjct: 263 TTAVIEGHTDNVGSYNHNQDLSQRRAEAVVNHLVEQYGIERSRLSAKGYGFTRPIADNAT 322
Query: 140 EDAYAKNRRAIVFL 153
++ KNRR +
Sbjct: 323 DEGKQKNRRIEAII 336
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 2/102 (1%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FD ++ ++ + ++++++ +IEGH D GS ++ L +RA V N+
Sbjct: 359 FDPGKAEVKQQYRNEIAKVADYMKRYNTTTAVIEGHTDNTGSPEKNMKLSQQRAQNVVNH 418
Query: 113 FVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V I SR+ YG Y + + KNRR +
Sbjct: 419 LVDNFGIERSRLSAKGYGATRRISYNNTPEGRQKNRRINAVI 460
>gi|187233929|gb|ACD01211.1| peptidoglycan-associated lipoprotein [Vibrio alginolyticus]
Length = 174
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 84/173 (48%), Gaps = 21/173 (12%)
Query: 1 MQYSTIFI-ILSAITMMSISGIDNLDTKISSPDTVLNESSLQE----------------- 42
MQ + + +L A+ +M+++ + D S+ N + E
Sbjct: 1 MQLNKVLKGLLIALPVMAVTACSSSDDAASNTGAATNNNGAVETTVAAPIDQSGQLTEQE 60
Query: 43 --QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSI 99
+ + +++F + +I ++L+ S+ + + IEGHADE G+ +I
Sbjct: 61 LKEQALRETQTIYFAFDNSTIAADYEEMLAAHASYLSKNPALNVTIEGHADERGTPEYNI 120
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
ALG RRA AV NY A G+ A ++ + SYG+E P + G ++ YAKNRRA++
Sbjct: 121 ALGERRAQAVANYLQALGVQADQISIVSYGEEKPLLLGQSDEVYAKNRRAVLV 173
>gi|186893942|ref|YP_001871054.1| OmpA/MotB domain-containing protein [Yersinia pseudotuberculosis
PB1/+]
gi|186696968|gb|ACC87597.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis PB1/+]
Length = 168
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 59/165 (35%), Gaps = 9/165 (5%)
Query: 1 MQYST----IFIILSAITMMSISGIDNLDTKISSPDTVLNESS----LQEQFSSSVGDSV 52
MQ I++ A+ +M + G ++ + + + + V
Sbjct: 4 MQNKRLIQRIWVSFLAMGLMLLVGCQAKPQGLTPDQITALQEQGFKLTDNGWEFGLANKV 63
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFN 111
FD+ + +Q + +G L ++GH D +G + + L +RA AV +
Sbjct: 64 LFDSDVKKLNSEGMQTVQKIGRILSDVGIKHMRVDGHTDSVGKDDYNQQLSYQRALAVAD 123
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
GI S + V GK P A+NRR + +
Sbjct: 124 TLATVGIPKSNIDVRGRGKLEPVADNRTSKGRAENRRVAIIITAS 168
>gi|15608039|ref|NP_215414.1| outer membrane protein A OMPA [Mycobacterium tuberculosis H37Rv]
gi|15840318|ref|NP_335355.1| OmpA family protein [Mycobacterium tuberculosis CDC1551]
gi|31792087|ref|NP_854580.1| outer membrane protein A OMPA [Mycobacterium bovis AF2122/97]
gi|121636822|ref|YP_977045.1| putative outer membrane protein A ompA [Mycobacterium bovis BCG
str. Pasteur 1173P2]
gi|148660677|ref|YP_001282200.1| outer membrane protein A [Mycobacterium tuberculosis H37Ra]
gi|148822109|ref|YP_001286863.1| outer membrane protein A ompA [Mycobacterium tuberculosis F11]
gi|167967701|ref|ZP_02549978.1| outer membrane protein A ompA [Mycobacterium tuberculosis H37Ra]
gi|215402698|ref|ZP_03414879.1| outer membrane protein A ompA [Mycobacterium tuberculosis 02_1987]
gi|215426166|ref|ZP_03424085.1| outer membrane protein A ompA [Mycobacterium tuberculosis T92]
gi|215429757|ref|ZP_03427676.1| outer membrane protein A ompA [Mycobacterium tuberculosis EAS054]
gi|215445042|ref|ZP_03431794.1| outer membrane protein A ompA [Mycobacterium tuberculosis T85]
gi|219556764|ref|ZP_03535840.1| outer membrane protein A ompA [Mycobacterium tuberculosis T17]
gi|224989293|ref|YP_002643980.1| putative outer membrane protein A [Mycobacterium bovis BCG str.
Tokyo 172]
gi|253800076|ref|YP_003033077.1| hypothetical protein TBMG_03089 [Mycobacterium tuberculosis KZN
1435]
gi|254231205|ref|ZP_04924532.1| outer membrane protein A ompA [Mycobacterium tuberculosis C]
gi|254363830|ref|ZP_04979876.1| outer membrane protein A ompA [Mycobacterium tuberculosis str.
Haarlem]
gi|254549877|ref|ZP_05140324.1| hypothetical protein Mtube_05346 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|260185796|ref|ZP_05763270.1| hypothetical protein MtubCP_07170 [Mycobacterium tuberculosis
CPHL_A]
gi|260199919|ref|ZP_05767410.1| hypothetical protein MtubT4_07255 [Mycobacterium tuberculosis T46]
gi|260204103|ref|ZP_05771594.1| hypothetical protein MtubK8_07315 [Mycobacterium tuberculosis K85]
gi|289442311|ref|ZP_06432055.1| outer membrane protein A ompA [Mycobacterium tuberculosis T46]
gi|289446466|ref|ZP_06436210.1| outer membrane protein A ompA [Mycobacterium tuberculosis CPHL_A]
gi|289555318|ref|ZP_06444528.1| outer membrane protein A ompA [Mycobacterium tuberculosis KZN 605]
gi|289568867|ref|ZP_06449094.1| outer membrane protein A ompA [Mycobacterium tuberculosis T17]
gi|289573527|ref|ZP_06453754.1| outer membrane protein A ompA [Mycobacterium tuberculosis K85]
gi|289744630|ref|ZP_06504008.1| outer membrane protein A ompA [Mycobacterium tuberculosis 02_1987]
gi|289749421|ref|ZP_06508799.1| outer membrane protein A ompA [Mycobacterium tuberculosis T92]
gi|289752954|ref|ZP_06512332.1| outer membrane protein A ompA [Mycobacterium tuberculosis EAS054]
gi|289756985|ref|ZP_06516363.1| outer membrane protein A ompA [Mycobacterium tuberculosis T85]
gi|294996380|ref|ZP_06802071.1| hypothetical protein Mtub2_18234 [Mycobacterium tuberculosis 210]
gi|297633418|ref|ZP_06951198.1| hypothetical protein MtubK4_04816 [Mycobacterium tuberculosis KZN
4207]
gi|297730403|ref|ZP_06959521.1| hypothetical protein MtubKR_04896 [Mycobacterium tuberculosis KZN
R506]
gi|306775025|ref|ZP_07413362.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu001]
gi|306782060|ref|ZP_07420397.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu002]
gi|306783573|ref|ZP_07421895.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu003]
gi|306787937|ref|ZP_07426259.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu004]
gi|306792274|ref|ZP_07430576.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu005]
gi|306796673|ref|ZP_07434975.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu006]
gi|306806741|ref|ZP_07443409.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu007]
gi|306966938|ref|ZP_07479599.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu009]
gi|306971133|ref|ZP_07483794.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu010]
gi|307078861|ref|ZP_07488031.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu011]
gi|307083420|ref|ZP_07492533.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu012]
gi|313657730|ref|ZP_07814610.1| hypothetical protein MtubKV_04886 [Mycobacterium tuberculosis KZN
V2475]
gi|54040011|sp|P65594|Y923_MYCBO RecName: Full=Uncharacterized protein Mb0923
gi|54042590|sp|P65593|Y899_MYCTU RecName: Full=Uncharacterized protein Rv0899/MT0922
gi|1314039|emb|CAA97374.1| OUTER MEMBRANE PROTEIN A OMPA [Mycobacterium tuberculosis H37Rv]
gi|13880481|gb|AAK45169.1| OmpA family protein [Mycobacterium tuberculosis CDC1551]
gi|31617675|emb|CAD93784.1| PROBABLE OUTER MEMBRANE PROTEIN A OMPA [Mycobacterium bovis
AF2122/97]
gi|114199356|gb|ABI54278.1| outer membrane protein A [Mycobacterium bovis]
gi|121492469|emb|CAL70937.1| probable outer membrane protein A ompA [Mycobacterium bovis BCG
str. Pasteur 1173P2]
gi|124600264|gb|EAY59274.1| outer membrane protein A ompA [Mycobacterium tuberculosis C]
gi|134149344|gb|EBA41389.1| outer membrane protein A ompA [Mycobacterium tuberculosis str.
Haarlem]
gi|148504829|gb|ABQ72638.1| outer membrane protein A [Mycobacterium tuberculosis H37Ra]
gi|148720636|gb|ABR05261.1| outer membrane protein A ompA [Mycobacterium tuberculosis F11]
gi|224772406|dbj|BAH25212.1| putative outer membrane protein A [Mycobacterium bovis BCG str.
Tokyo 172]
gi|253321579|gb|ACT26182.1| outer membrane protein A ompA [Mycobacterium tuberculosis KZN 1435]
gi|289415230|gb|EFD12470.1| outer membrane protein A ompA [Mycobacterium tuberculosis T46]
gi|289419424|gb|EFD16625.1| outer membrane protein A ompA [Mycobacterium tuberculosis CPHL_A]
gi|289439950|gb|EFD22443.1| outer membrane protein A ompA [Mycobacterium tuberculosis KZN 605]
gi|289537958|gb|EFD42536.1| outer membrane protein A ompA [Mycobacterium tuberculosis K85]
gi|289542621|gb|EFD46269.1| outer membrane protein A ompA [Mycobacterium tuberculosis T17]
gi|289685158|gb|EFD52646.1| outer membrane protein A ompA [Mycobacterium tuberculosis 02_1987]
gi|289690008|gb|EFD57437.1| outer membrane protein A ompA [Mycobacterium tuberculosis T92]
gi|289693541|gb|EFD60970.1| outer membrane protein A ompA [Mycobacterium tuberculosis EAS054]
gi|289712549|gb|EFD76561.1| outer membrane protein A ompA [Mycobacterium tuberculosis T85]
gi|308216378|gb|EFO75777.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu001]
gi|308325291|gb|EFP14142.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu002]
gi|308331576|gb|EFP20427.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu003]
gi|308335389|gb|EFP24240.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu004]
gi|308339194|gb|EFP28045.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu005]
gi|308342931|gb|EFP31782.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu006]
gi|308346757|gb|EFP35608.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu007]
gi|308355333|gb|EFP44184.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu009]
gi|308359272|gb|EFP48123.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu010]
gi|308363182|gb|EFP52033.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu011]
gi|308366838|gb|EFP55689.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu012]
gi|326904881|gb|EGE51814.1| outer membrane protein A ompA [Mycobacterium tuberculosis W-148]
gi|328459815|gb|AEB05238.1| outer membrane protein A ompA [Mycobacterium tuberculosis KZN 4207]
Length = 326
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 1/140 (0%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
M ++ I+ P + LQ ++ G + F S+ PAD ++L+ +
Sbjct: 186 MKIVNNIEVTGQAPPGPPASGPCADLQSAINAVTGGPIAFGNDGASLIPADYEILNRVAD 245
Query: 75 WLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
L+ I G+ D GS +I L +RA V +Y VARG++ + G P
Sbjct: 246 KLKACPDARVTINGYTDNTGSEGINIPLSAQRAKIVADYLVARGVAGDHIATVGLGSVNP 305
Query: 134 SVYGHDEDAYAKNRRAIVFL 153
+ AKNRR + +
Sbjct: 306 IASNATPEGRAKNRRVEIVV 325
>gi|296134255|ref|YP_003641502.1| OmpA/MotB domain protein [Thermincola sp. JR]
gi|296032833|gb|ADG83601.1| OmpA/MotB domain protein [Thermincola potens JR]
Length = 296
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 52/132 (39%), Gaps = 5/132 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
K + + + + S+ +++FF S +I P + L +G L+ + IE
Sbjct: 102 KGQNLGGKVVVAYEERGLVISLKETMFFAIGSAAINPQAQETLIKIGQVLKNMPNNLRIE 161
Query: 87 GHADE----LGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDED 141
GH + S+ L RA V + + R R+ T YG+ P V E
Sbjct: 162 GHTCNLPIRTANFPSNWELSTARATNVVKFLIDRVGFDPKRLSATGYGEYRPLVPNTSEA 221
Query: 142 AYAKNRRAIVFL 153
A NRR + +
Sbjct: 222 NRAMNRRVDIVV 233
>gi|188577427|ref|YP_001914356.1| outer membrane protein P6 [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188521879|gb|ACD59824.1| outer membrane protein P6 [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 148
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 37/137 (27%), Positives = 63/137 (45%), Gaps = 2/137 (1%)
Query: 18 ISGIDNLDTKISSPDTV-LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+ + + P T L + + V+FD S++P +++ +L
Sbjct: 8 ATNTTAGSSVPTGPSTSGLYGPGDLDTDACLRQRVVYFDLDQDSLKPEFQAIMACHAKYL 67
Query: 77 EKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
++G+ADE GSR ++ LG RR AV + A G SAS++ V SYG+E P
Sbjct: 68 RDRPSSRITLQGNADERGSREYNMGLGERRGNAVSSSLQAAGGSASQLTVVSYGEERPVC 127
Query: 136 YGHDEDAYAKNRRAIVF 152
+E +++NRR +
Sbjct: 128 TESNESCWSQNRRVEIV 144
>gi|4580967|gb|AAD24554.1|AF117962_1 OprF [Pseudomonas chlororaphis subsp. chlororaphis]
Length = 325
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 2/112 (1%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGL 103
V V FD ++P + NL +++++ ++EGH D +G + L
Sbjct: 210 VVRVELDVKFDFDKSVVKPNSYADIKNLADFMKQNPQTTTVVEGHTDSVGPDAYNQKLSE 269
Query: 104 RRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RRA AV ++ + +SR++ YG+ P E A NRR ++
Sbjct: 270 RRANAVKQVLTSQYGVESSRVQSVGYGESRPVADNATEAGRAVNRRVEAQVE 321
>gi|56460187|ref|YP_155468.1| peptidoglycan-associated lipoprotein [Idiomarina loihiensis L2TR]
gi|56179197|gb|AAV81919.1| Peptidoglycan-associated lipoprotein [Idiomarina loihiensis L2TR]
Length = 178
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 46/177 (25%), Positives = 76/177 (42%), Gaps = 25/177 (14%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDS----- 51
MQ + + I++ T+ + S D+ + + + ++ D
Sbjct: 1 MQLNKLLKALAIVVPMATLAACSSNQETDSGMGAGQEINQQAEQDSGVEVGAADRAQRME 60
Query: 52 ---------------VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
V+F +++ +LS + ++ +IEGH DE G+
Sbjct: 61 EERQQKMEALRKEHIVYFAFDKSNVQSEYTDLLSAHADYLVKNPSVKVVIEGHTDERGTP 120
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+IALG RRA AV +Y G+ S+ SYG+E P V G +E AYAKNRRA++
Sbjct: 121 EYNIALGERRAKAVESYLHNLGVQDSQTSTVSYGEEKPMVNGSNERAYAKNRRAVLV 177
>gi|194337185|ref|YP_002018979.1| peptidoglycan-associated lipoprotein [Pelodictyon
phaeoclathratiforme BU-1]
gi|194309662|gb|ACF44362.1| peptidoglycan-associated lipoprotein [Pelodictyon
phaeoclathratiforme BU-1]
Length = 173
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 19/173 (10%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQ------------------E 42
M II+ A+ + + + T + + S +
Sbjct: 1 MTKKINGIIVLALMVTAGCSSKSAVTPDAGSAGSGSASLPSSSSPSLPLLPSSPSGYGFD 60
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIAL 101
Q+ + VFFD S ++ + L G W+ + LIEGH DE G+ ++AL
Sbjct: 61 QWQTGPLGDVFFDYDSATLSAEAQEQLHQNGVWMGSNARKGALIEGHCDERGTSEYNLAL 120
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G RRA + Y V G++ SR++ SYG+E P G +E+++AKNRRA +K
Sbjct: 121 GDRRAISAKEYLVRFGVAPSRLETVSYGEERPFAAGSNEESWAKNRRAHFVVK 173
>gi|254418180|ref|ZP_05031904.1| peptidoglycan-associated lipoprotein, putative [Brevundimonas sp.
BAL3]
gi|196184357|gb|EDX79333.1| peptidoglycan-associated lipoprotein, putative [Brevundimonas sp.
BAL3]
Length = 184
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 44/121 (36%), Positives = 64/121 (52%), Gaps = 1/121 (0%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIE 86
++ + ++ F +VGD ++FD SY +R + L W IE
Sbjct: 52 VTGGNMGAAAPGTEQDFVVNVGDRIYFDLDSYDVRSEAMPRLDAQAQWLQRYPQVTVRIE 111
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
G+ADE G+R ++ALG RRA AV Y + RG+ A R+ SYGKE P G ED++A+N
Sbjct: 112 GNADERGTREYNLALGARRAEAVRTYLINRGVPAGRIDTISYGKERPIAEGSSEDSWARN 171
Query: 147 R 147
R
Sbjct: 172 R 172
>gi|294651528|ref|ZP_06728837.1| OmpA family protein [Acinetobacter haemolyticus ATCC 19194]
gi|292822551|gb|EFF81445.1| OmpA family protein [Acinetobacter haemolyticus ATCC 19194]
Length = 160
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 33/153 (21%), Positives = 61/153 (39%), Gaps = 4/153 (2%)
Query: 5 TIFIILSAITMMSISGIDNLDTKISSPDTVLNESS---LQEQFSSSVGDSVFFDTSSYSI 61
T+ I A+ ++++G + +L + E +S + + + FD + I
Sbjct: 6 TLKISFIALLCLTLAGCLSFGPLKYRQVKMLKQEGFVLTDEGWSLGLPERLLFDFNKSDI 65
Query: 62 RPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA 120
+P ++ L + I GH D++G+ + L RA +V FV G
Sbjct: 66 KPEHANEIARLAKQLNKYDLQKLKIVGHTDDVGNPEYNQKLSEERAQSVSMIFVNEGFKQ 125
Query: 121 SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ + V G P + E+ A NRR V +
Sbjct: 126 NNLTVIGRGSSQPYLPNTSEENRASNRRVAVII 158
>gi|134095585|ref|YP_001100660.1| putative peptidoglycan-associated lipoprotein (pal) [Herminiimonas
arsenicoxydans]
gi|133739488|emb|CAL62539.1| putative peptidoglycan-associated lipoprotein precursor pal-like
[Herminiimonas arsenicoxydans]
Length = 167
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 50/166 (30%), Positives = 76/166 (45%), Gaps = 14/166 (8%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKI-------------SSPDTVLNESSLQEQFSSS 47
M+ T ILS +++ LD K S + L +
Sbjct: 1 MRTITSAFILSTAMLLAACSSTKLDDKAPIEDRTGSSVDPRSVGTVNASSDPLNDPQGVL 60
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRA 106
SV+FD SY ++P QV++N +L+ + +I+G+ DE G ++ALG +RA
Sbjct: 61 AKRSVYFDYDSYVVKPEYQQVVANHAKYLQSNRTRKIIIQGNTDERGGAEYNLALGQKRA 120
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
AV G+ S+M+ S GKE P G DE A+A+NRRA +
Sbjct: 121 EAVRKSLSLLGVPESQMEAVSLGKEKPKALGSDEAAWAENRRADIV 166
>gi|157371239|ref|YP_001479228.1| hypothetical protein Spro_2999 [Serratia proteamaculans 568]
gi|157323003|gb|ABV42100.1| OmpA/MotB domain protein [Serratia proteamaculans 568]
Length = 406
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 52/134 (38%), Gaps = 4/134 (2%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
+ ++ +Q + FD+++ ++R I V+ + + + L+ G++D
Sbjct: 260 AEGLVVVRDEAQQSVVILKGDGLFDSAATTVRGNYIPVIDRIAAAMNGVSGKILVTGYSD 319
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
L S+ L L RA AV + R+K G+ P + + A N
Sbjct: 320 NLPIRSARFASNWELSLARADAVSAQLQKHLDNPQRVKAEGRGESNPVAPNNSKVNRALN 379
Query: 147 RRAIVFLKGCRANT 160
RR + L NT
Sbjct: 380 RRVEITLLVAPENT 393
>gi|90416505|ref|ZP_01224436.1| ompA family protein [marine gamma proteobacterium HTCC2207]
gi|90331704|gb|EAS46932.1| ompA family protein [marine gamma proteobacterium HTCC2207]
Length = 220
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 54/123 (43%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
+ ++ + + + + ++ F ++S I + VL ++ LE++D ++ GH D
Sbjct: 93 GSGVSVERVGDNINLIMPGNITFASNSADINASFYSVLDSVALVLEEYDKTLVVVAGHTD 152
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + L RRA +V Y V++ I R++ +G+ P NRR
Sbjct: 153 SDGGAAFNEDLSERRAQSVSGYLVSQSILPIRLETVGFGERQPIAGNDSAAGKQLNRRVE 212
Query: 151 VFL 153
+ L
Sbjct: 213 ITL 215
>gi|256828886|ref|YP_003157614.1| OmpA/MotB domain-containing protein [Desulfomicrobium baculatum DSM
4028]
gi|256578062|gb|ACU89198.1| OmpA/MotB domain protein [Desulfomicrobium baculatum DSM 4028]
Length = 375
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 47/108 (43%), Gaps = 3/108 (2%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNSSIALGLRRAYA 108
V FD I+PA Q L++ +++++ I GH D G+ + L RRA A
Sbjct: 263 KVNFDFDKSDIKPAYHQELADFAAYMKQQQSFTVVEIAGHTDSKGADEYNQKLSERRAKA 322
Query: 109 VFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
V +Y V S YG+ P E+ A+NRR LKG
Sbjct: 323 VRDYLVTNFGLDGSLFSARGYGESKPVASNDTEEGRAENRRMEAELKG 370
>gi|261418451|ref|YP_003252133.1| flagellar motor protein MotB [Geobacillus sp. Y412MC61]
gi|319767588|ref|YP_004133089.1| OmpA/MotB domain protein [Geobacillus sp. Y412MC52]
gi|261374908|gb|ACX77651.1| OmpA/MotB domain protein [Geobacillus sp. Y412MC61]
gi|317112454|gb|ADU94946.1| OmpA/MotB domain protein [Geobacillus sp. Y412MC52]
Length = 259
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 43/125 (34%), Gaps = 6/125 (4%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELG 93
L S E + ++ D + FD+ S +R D ++ + + + + +I GH D +
Sbjct: 121 LQTSLTDEGLAITILDDILFDSGSAEVRMKDRRLAAEISALLVMNPPRNIIISGHTDNVP 180
Query: 94 SRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
N A R + + + YG+ P KNRR
Sbjct: 181 IHNEKFASNWELSVMRAVNFMKVLLENKQLDPRYFSAKGYGEYKPIASNATAAGRMKNRR 240
Query: 149 AIVFL 153
+ +
Sbjct: 241 VEILI 245
>gi|119897129|ref|YP_932342.1| outer membrane protein [Azoarcus sp. BH72]
gi|119669542|emb|CAL93455.1| conserved hypothetical outer membrane protein [Azoarcus sp. BH72]
Length = 224
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 55/135 (40%), Gaps = 1/135 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ ++ V + + + V FDT Y I+P VL + L +H
Sbjct: 83 AQKAEMERATAGTGVSVSQTADNRLKLDIPSDVSFDTGRYDIKPEMRPVLDRFANTLNQH 142
Query: 80 DCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
I GH D GS + L + RA A +Y VARG++ SR+ + G P
Sbjct: 143 TVTTVSIIGHTDSTGSDAVNNPLSVNRAAATRDYLVARGVAGSRIAIDGRGAREPIADNG 202
Query: 139 DEDAYAKNRRAIVFL 153
A+NRR +F+
Sbjct: 203 TVAGRAQNRRVEIFV 217
>gi|77464239|ref|YP_353743.1| OmpA/MotB family protein [Rhodobacter sphaeroides 2.4.1]
gi|126463081|ref|YP_001044195.1| OmpA domain-containing protein [Rhodobacter sphaeroides ATCC 17029]
gi|221640123|ref|YP_002526385.1| OmpA domain-containing protein [Rhodobacter sphaeroides KD131]
gi|332559128|ref|ZP_08413450.1| OmpA domain protein precursor [Rhodobacter sphaeroides WS8N]
gi|77388657|gb|ABA79842.1| OmpA/MotB family protein [Rhodobacter sphaeroides 2.4.1]
gi|126104745|gb|ABN77423.1| OmpA domain protein [Rhodobacter sphaeroides ATCC 17029]
gi|221160904|gb|ACM01884.1| OmpA domain protein precursor [Rhodobacter sphaeroides KD131]
gi|332276840|gb|EGJ22155.1| OmpA domain protein precursor [Rhodobacter sphaeroides WS8N]
Length = 182
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 49/123 (39%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADE 91
N+ F ++GD VFF ++ A L W + D +IEGHADE
Sbjct: 55 GGPNDPRSIAYFQQTLGDRVFFTVDQSTLNDAARATLDTQSQWLMSNADYAIIIEGHADE 114
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
G+R ++ALG RRA AV +Y +++GI+ SRMK SYGKE P E Y+KNRRA+
Sbjct: 115 QGTREYNLALGARRASAVQDYLISKGIAPSRMKTVSYGKERPVEVCSTEACYSKNRRAVT 174
Query: 152 FLK 154
L
Sbjct: 175 VLS 177
>gi|56421066|ref|YP_148384.1| flagellar motor protein MotB [Geobacillus kaustophilus HTA426]
gi|56380908|dbj|BAD76816.1| motility protein B (flagellar motor rotation) [Geobacillus
kaustophilus HTA426]
Length = 259
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 43/125 (34%), Gaps = 6/125 (4%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELG 93
L S E + ++ D + FD+ S +R D ++ + + + + +I GH D +
Sbjct: 121 LQTSLTDEGLAITILDDILFDSGSAEVRMKDRRLAAEISALLVMNPPRNIIISGHTDNVP 180
Query: 94 SRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
N A R + + + YG+ P KNRR
Sbjct: 181 IHNEKFASNWELSVMRAVNFMKVLLENKQLDPRYFSAKGYGEYKPIASNATAAGRMKNRR 240
Query: 149 AIVFL 153
+ +
Sbjct: 241 VEILI 245
>gi|74318359|ref|YP_316099.1| hypothetical protein Tbd_2341 [Thiobacillus denitrificans ATCC
25259]
gi|74057854|gb|AAZ98294.1| conserved hypothetical protein [Thiobacillus denitrificans ATCC
25259]
Length = 225
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 55/129 (42%), Gaps = 1/129 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFL 84
+I D + + + S+ S FD S +++ + L + +
Sbjct: 91 PEIEHGDISVEKRASDNALLVSMTASTGFDNDSAALKAGYLPTLDKISRVLNQYGKTTVT 150
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+ GH D +G+ + AL RRA +V +YF ++ ++ R++ G+ P ED
Sbjct: 151 VIGHTDSVGTTQYNQALSERRAQSVLDYFASQKVNPLRLESYGKGETEPRADNSTEDGRR 210
Query: 145 KNRRAIVFL 153
NRR +++
Sbjct: 211 LNRRVELWI 219
>gi|308376544|ref|ZP_07439229.2| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu008]
gi|308350673|gb|EFP39524.1| outer membrane protein A ompA [Mycobacterium tuberculosis SUMu008]
Length = 320
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 1/140 (0%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
M ++ I+ P + LQ ++ G + F S+ PAD ++L+ +
Sbjct: 180 MKIVNNIEVTGQAPPGPPASGPCADLQSAINAVTGGPIAFGNDGASLIPADYEILNRVAD 239
Query: 75 WLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
L+ I G+ D GS +I L +RA V +Y VARG++ + G P
Sbjct: 240 KLKACPDARVTINGYTDNTGSEGINIPLSAQRAKIVADYLVARGVAGDHIATVGLGSVNP 299
Query: 134 SVYGHDEDAYAKNRRAIVFL 153
+ AKNRR + +
Sbjct: 300 IASNATPEGRAKNRRVEIVV 319
>gi|256823578|ref|YP_003147541.1| OmpA/MotB domain-containing protein [Kangiella koreensis DSM 16069]
gi|256797117|gb|ACV27773.1| OmpA/MotB domain protein [Kangiella koreensis DSM 16069]
Length = 377
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
+ FDT+ Y ++P + ++ + + + + I+GH D +GS + L RRA +V
Sbjct: 267 RLNFDTNKYEVKPEMVAEIAKVAEFLRQYPSVNAEIQGHTDSVGSSAYNQGLSERRANSV 326
Query: 110 FNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
+Y V+ I+ASR+ YG+E P E+ A NRRA
Sbjct: 327 KDYLVSNFGINASRLSAKGYGEEEPIADNSTEEGRALNRRAE 368
>gi|148977417|ref|ZP_01814017.1| peptidoglycan-associated lipoprotein [Vibrionales bacterium SWAT-3]
gi|145963369|gb|EDK28634.1| peptidoglycan-associated lipoprotein [Vibrionales bacterium SWAT-3]
Length = 180
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 27/179 (15%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDTVLNESSLQ--------------- 41
MQ + + I L + + + S D + S ++ S +
Sbjct: 1 MQLNKVLKGLMIALPVMAVTACSSTDEATSATSGTESNQTTSGSEGNVDTTVVTPIDANG 60
Query: 42 -------EQFSSSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELG 93
++ + +++F + +I ++L+ + ++ D IEGHADE G
Sbjct: 61 QLSEQELKEQALRETQTIYFAFDNSTIAGDYEEMLAAHAAYLVKNVDMKVTIEGHADERG 120
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ +IALG RRA AV Y A G+ A ++ + SYG+E P + G ED YAKNRRA++
Sbjct: 121 TPEYNIALGERRAQAVAKYLQALGVQADQISIVSYGEEKPLLLGQSEDVYAKNRRAVLV 179
>gi|146307120|ref|YP_001187585.1| OmpF family protein [Pseudomonas mendocina ymp]
gi|145575321|gb|ABP84853.1| OmpF family protein [Pseudomonas mendocina ymp]
Length = 327
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 2/106 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
V FD ++ + NL ++ + +EGH D +GS + L RRA AV
Sbjct: 217 DVKFDFDKDRVKEESYGDIKNLADFMNQYPQTTTTVEGHTDSVGSDAYNQGLSERRANAV 276
Query: 110 FNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
N V + + +R+ YG+ P + A NRR ++
Sbjct: 277 RNVLVNQYGVDGNRVNAVGYGETRPVADNATDSGRAINRRVEAEVE 322
>gi|15612119|ref|NP_223771.1| putative Outer membrane protein [Helicobacter pylori J99]
gi|4155645|gb|AAD06633.1| putative Outer membrane protein [Helicobacter pylori J99]
Length = 179
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 38/177 (21%), Positives = 74/177 (41%), Gaps = 24/177 (13%)
Query: 1 MQYSTIFIILSAITMMSISG-------------IDNLDTKISSPDTVLNESSLQEQFSSS 47
M+ S++F L A ++ + T + + + +++ +
Sbjct: 1 MKRSSVFSFLVAFLLVVGCSHKMDNKTVAGDVSTKAVQTAPVTTEPAPEKEEPKQEPAPV 60
Query: 48 VGDS-----------VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRN 96
V + ++FD Y I+ +D + L + +++ L+EG+ DE GS
Sbjct: 61 VEEKPAIESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEFGSSE 120
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ ALG++R +V N V +G+ +K S+G+ P + Y +NRR V L
Sbjct: 121 YNQALGVKRTLSVKNALVIKGVEKDMIKTISFGESKPKCVQKTRECYRENRRVDVKL 177
>gi|134294843|ref|YP_001118578.1| OmpA domain-containing protein [Burkholderia vietnamiensis G4]
gi|134138000|gb|ABO53743.1| OmpA domain protein [Burkholderia vietnamiensis G4]
Length = 170
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 44/167 (26%), Positives = 77/167 (46%), Gaps = 15/167 (8%)
Query: 1 MQYSTIFIILSAITMMSISGIDN--------------LDTKISSPDTVLNESSLQEQFSS 46
M + + L+ + + +++ + + +N L + S
Sbjct: 1 MMSNKARLALAVMMISALAACKSGVKLDDKANNAGAVSTQPSADNVAQVNVDPLNDPNSP 60
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRR 105
S++FD SYS++ +L +L+ H LI+G+ DE G+ ++ALG +R
Sbjct: 61 LAKRSIYFDFDSYSVKDEYQPLLQQHAQYLKSHPQRHVLIQGNTDERGTSEYNLALGQKR 120
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
A AV G++ S+M+ S GKE P GHDE ++A+NRRA +
Sbjct: 121 AEAVRRAMALLGVNDSQMEAVSLGKEKPQATGHDEASWAQNRRADLV 167
>gi|113970702|ref|YP_734495.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-4]
gi|114047931|ref|YP_738481.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-7]
gi|113885386|gb|ABI39438.1| OmpA/MotB domain protein [Shewanella sp. MR-4]
gi|113889373|gb|ABI43424.1| OmpA/MotB domain protein [Shewanella sp. MR-7]
Length = 178
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 46/177 (25%), Positives = 76/177 (42%), Gaps = 25/177 (14%)
Query: 1 MQYSTIF-IILSAITMMSISGIDNLDTKISSPDTVLNESSLQ------------------ 41
M + + +L A+ +M+IS + + + S +
Sbjct: 1 MDLNKLLKAMLVALPIMAISACSSTSESETDAMGSTSGSGSELNGGGVQTGGIGGMLSPE 60
Query: 42 -----EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
+ ++FD ++ VL G++ +E LIEGHADE G+
Sbjct: 61 EQQRQQLEQLRKEHIIYFDFDRSEVQTEFAAVLEAHGTYLVEHPSVRVLIEGHADERGTP 120
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+IALG RRA AV Y G+ S+M + SYG+E P + ++ +AKNRRA++
Sbjct: 121 EYNIALGERRAKAVAKYLQGMGVQPSQMSIVSYGEEKPLDFTRTDEGFAKNRRAVLV 177
>gi|313203887|ref|YP_004042544.1| ompa/motb domain protein [Paludibacter propionicigenes WB4]
gi|312443203|gb|ADQ79559.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4]
Length = 506
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 52/129 (40%), Gaps = 1/129 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFL 84
I++ + ++ + + F++ I+ + +L+ + + + +
Sbjct: 376 PGIAANKGCPEVKAETKKIFAQALQGIQFESGKDVIKKSSFAILNKVVKVMNDNPSYNLE 435
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
I GH D G+ ++ L +RA AV Y G+ A ++ +G+ +P A
Sbjct: 436 INGHTDNQGAAAMNLTLSQKRADAVKAYLTKNGVDAGKLAAKGFGQTVPVADNATAAGRA 495
Query: 145 KNRRAIVFL 153
KNRR +
Sbjct: 496 KNRRVEFKV 504
>gi|256819127|ref|YP_003140406.1| OmpA/MotB domain-containing protein [Capnocytophaga ochracea DSM
7271]
gi|256580710|gb|ACU91845.1| OmpA/MotB domain protein [Capnocytophaga ochracea DSM 7271]
Length = 230
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 4/150 (2%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDS---VFFDTSSYSIRPA 64
++ A + + +D KI + + + + ++ V+FDT+ Y+I
Sbjct: 64 VVGGAAGAVIGNQMDKQAKKIEEEIPGADVKRVDDGIVVTFDENNGGVYFDTNKYNINNK 123
Query: 65 DIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
Q L L E D + ++ GH D +G ++ L RRA AV NYF ++G+ SR
Sbjct: 124 SRQTLDKLSAILKEYPDTNVIVAGHTDNVGKDEYNLGLSQRRAQAVTNYFKSKGLVGSRF 183
Query: 124 KVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
YG+ P D AKNRR V +
Sbjct: 184 TTKWYGERNPVASNETADGRAKNRRVNVVI 213
>gi|149277257|ref|ZP_01883399.1| lipoprotein PG3 [Pedobacter sp. BAL39]
gi|149232134|gb|EDM37511.1| lipoprotein PG3 [Pedobacter sp. BAL39]
Length = 226
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 46/133 (34%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
D +I + E + F + + +L +
Sbjct: 79 DKQAAEIQNAIPNAEVIREGEGIIVKFDSGILFGFDKADLTAQAKTNVKSLAGSLNQYPG 138
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
D + GH D G+ ++ L RRA AV Y V++G+ +SR+ G P E
Sbjct: 139 TDIKVIGHTDNKGTETYNMGLSERRAAAVKAYAVSQGVPSSRLITVGKGFSEPIDDNSTE 198
Query: 141 DAYAKNRRAIVFL 153
A NRR V +
Sbjct: 199 AGRAANRRVEVVI 211
>gi|16762663|ref|NP_458280.1| outer membrane lipoprotein [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|16766931|ref|NP_462546.1| outer membrane lipoprotein [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|29144150|ref|NP_807492.1| outer membrane lipoprotein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|62182147|ref|YP_218564.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|161505818|ref|YP_001572930.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|161616710|ref|YP_001590675.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167549121|ref|ZP_02342880.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|168232486|ref|ZP_02657544.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|168235246|ref|ZP_02660304.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|168241813|ref|ZP_02666745.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|168465059|ref|ZP_02698951.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|168818532|ref|ZP_02830532.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|194446335|ref|YP_002042894.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194450414|ref|YP_002047675.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194470919|ref|ZP_03076903.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194738075|ref|YP_002116578.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197250152|ref|YP_002148575.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197264832|ref|ZP_03164906.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|198245549|ref|YP_002217605.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|200387506|ref|ZP_03214118.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204928737|ref|ZP_03219936.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|213426937|ref|ZP_03359687.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|213580286|ref|ZP_03362112.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
gi|213622354|ref|ZP_03375137.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
gi|213646868|ref|ZP_03376921.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Typhi str. J185]
gi|213852846|ref|ZP_03382378.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
gi|224585444|ref|YP_002639243.1| outer membrane lipoprotein [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|238910327|ref|ZP_04654164.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|289811587|ref|ZP_06542216.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Typhi str. AG3]
gi|289824292|ref|ZP_06543885.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Typhi str. E98-3139]
gi|25512154|pir||AC0982 probable outer membrane protein STY4157 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16422210|gb|AAL22505.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|16504969|emb|CAD07983.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29139787|gb|AAO71352.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|62129780|gb|AAX67483.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|160867165|gb|ABX23788.1| hypothetical protein SARI_03994 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
gi|161366074|gb|ABX69842.1| hypothetical protein SPAB_04529 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194404998|gb|ACF65220.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194408718|gb|ACF68937.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194457283|gb|EDX46122.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|194713577|gb|ACF92798.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|195632363|gb|EDX50847.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197213855|gb|ACH51252.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|197243087|gb|EDY25707.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197291562|gb|EDY30914.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|197940065|gb|ACH77398.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|199604604|gb|EDZ03149.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204322170|gb|EDZ07368.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205325701|gb|EDZ13540.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205333235|gb|EDZ19999.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|205338706|gb|EDZ25470.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205344463|gb|EDZ31227.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|224469972|gb|ACN47802.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Paratyphi C strain RKS4594]
gi|267995894|gb|ACY90779.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|312914671|dbj|BAJ38645.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|320088065|emb|CBY97827.1| Inner membrane lipoprotein yiaD Flags: Precursor [Salmonella
enterica subsp. enterica serovar Weltevreden str.
2007-60-3289-1]
gi|321226700|gb|EFX51750.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|322613966|gb|EFY10902.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322620335|gb|EFY17203.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322625340|gb|EFY22167.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322629993|gb|EFY26766.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322634183|gb|EFY30918.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322635916|gb|EFY32625.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322643166|gb|EFY39740.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322644613|gb|EFY41149.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322650855|gb|EFY47247.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322652981|gb|EFY49316.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322659944|gb|EFY56184.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322663277|gb|EFY59481.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322668763|gb|EFY64916.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322674434|gb|EFY70527.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322678358|gb|EFY74419.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322680864|gb|EFY76898.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322687200|gb|EFY83173.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|322716635|gb|EFZ08206.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
gi|323132006|gb|ADX19436.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
gi|323192159|gb|EFZ77392.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323200663|gb|EFZ85737.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323201373|gb|EFZ86439.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323206773|gb|EFZ91727.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323211797|gb|EFZ96629.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323216156|gb|EGA00884.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323220379|gb|EGA04833.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323226236|gb|EGA10451.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323228356|gb|EGA12487.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323234177|gb|EGA18265.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323237162|gb|EGA21229.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323244681|gb|EGA28685.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323249162|gb|EGA33080.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323250719|gb|EGA34599.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323257594|gb|EGA41281.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323262303|gb|EGA45864.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323266142|gb|EGA49633.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323268777|gb|EGA52235.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
gi|326625391|gb|EGE31736.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Dublin str. 3246]
gi|326629887|gb|EGE36230.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Gallinarum str. 9]
gi|332990496|gb|AEF09479.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 220
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD+SS +++PA L+ + L+++ + G+ D
Sbjct: 94 GTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVVGYTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + ++ L +RA +V + + +G+ ASR++ + G P + A+NRR
Sbjct: 154 STGSHDLNMRLSQQRADSVASSLITQGVDASRIRTSGMGPANPIASNSTAEGKAQNRRVE 213
Query: 151 VFLK 154
+ L
Sbjct: 214 ITLS 217
>gi|305665009|ref|YP_003861296.1| OmpA/MotB protein [Maribacter sp. HTCC2170]
gi|88707423|gb|EAQ99668.1| OmpA/MotB [Maribacter sp. HTCC2170]
Length = 404
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 1/144 (0%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
M+ + + D + N+ +L + + ++V F Y + L +
Sbjct: 258 MVLLESAEPADFVQNPTAIRNNDRNLIVLNETHLFENVLFHFDKYDLLGQAKNELDRVYR 317
Query: 75 W-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
I GH D +G+ + ++ L RA +V NYFV G+S++R+K T G P
Sbjct: 318 ILENDSSLSISIYGHTDSVGAESYNLELSKLRAKSVANYFVELGLSSNRIKSTGKGSSEP 377
Query: 134 SVYGHDEDAYAKNRRAIVFLKGCR 157
E+ NRR L +
Sbjct: 378 IASNASENGRKMNRRVEFVLSNKK 401
>gi|167990874|ref|ZP_02571973.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205330659|gb|EDZ17423.1| inner membrane lipoprotein YiaD [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
Length = 220
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD+SS +++PA L+ + L+++ + G+ D
Sbjct: 94 GTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVVGYTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + ++ L +RA +V + + +G+ ASR++ + G P + A+NRR
Sbjct: 154 STGSHDLNMRLSQQRADSVASSLITQGVDASRIRTSGMGPANPIASNSTAEGKAQNRRVE 213
Query: 151 VFLK 154
+ L
Sbjct: 214 ITLS 217
>gi|124007678|ref|ZP_01692381.1| OmpA family protein [Microscilla marina ATCC 23134]
gi|123986800|gb|EAY26572.1| OmpA family protein [Microscilla marina ATCC 23134]
Length = 705
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 51/138 (36%), Gaps = 1/138 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-WLEK 78
+ K + + + + V + + F + S + L+ +
Sbjct: 564 EVKTDTLKPGDVIKLTVALEVLKMNAKIVLNHINFASGSSKLDEDSYVELAKVVQLMENN 623
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
D I H D +G + ++ L +RA +VFNY + G+ R+ YG P V
Sbjct: 624 KDIKLEISAHTDNVGVYSRNMRLSRQRAQSVFNYLIKTGVDKKRLVSKGYGSARPLVPNT 683
Query: 139 DEDAYAKNRRAIVFLKGC 156
+ AKNRR + G
Sbjct: 684 TKKNKAKNRRVEFKVIGT 701
>gi|313205096|ref|YP_004043753.1| ompa/motb domain protein [Paludibacter propionicigenes WB4]
gi|312444412|gb|ADQ80768.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4]
Length = 426
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 53/128 (41%), Gaps = 2/128 (1%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL--IE 86
D++ N S + S ++ F+ S + L + L+ +
Sbjct: 298 DDLDSISNSRSNEPGVLKSSFQNIEFEFGSDKLTTNSYATLDQIALTLKDKSAKVRLSVA 357
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
G+ D +G+ + L ++RA +V Y + +G+ AS + +T YG++ P + + N
Sbjct: 358 GYTDYIGTEEYNQILSVKRANSVRIYLLNKGVPASSVTITGYGEKDPVANNNTDKGRQAN 417
Query: 147 RRAIVFLK 154
RR +
Sbjct: 418 RRVEFQIS 425
>gi|260774919|ref|ZP_05883820.1| outer membrane protein A precursor [Vibrio coralliilyticus ATCC
BAA-450]
gi|260609174|gb|EEX35332.1| outer membrane protein A precursor [Vibrio coralliilyticus ATCC
BAA-450]
Length = 188
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 30/159 (18%), Positives = 55/159 (34%), Gaps = 7/159 (4%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQ------EQFSSSVGDSVFFD 55
++ + L I S + F + V DS F
Sbjct: 22 RFKGNALTLGFIAKFGGSDEPAAQPVQEELMVEEVVEEEVVVEPIVKTFETKVVDSSSFA 81
Query: 56 TSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
+S ++P +L+ + E + G+ D G+ + + L RRA +V +
Sbjct: 82 LNSAELKPESKAMLAELVAFMTEFPQSTVEVVGYTDSSGAASYNQKLSERRAQSVADALE 141
Query: 115 ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+GI ASR+ G+ P + +NRR + +
Sbjct: 142 EQGIDASRISARGEGENNPIASNETQQGREQNRRVEIMV 180
>gi|332977451|gb|EGK14226.1| outer membrane protein [Psychrobacter sp. 1501(2011)]
Length = 383
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 49/147 (33%), Gaps = 8/147 (5%)
Query: 22 DNLDTKISSPDTVLNES-----SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
D LD ++P V+ + +Q + VFFD I+ ++ + +
Sbjct: 227 DRLDQCPNTPANVVVDETGCPVQVQIDDELKMELRVFFDNDKSVIKEQYKPEIAKVAEKM 286
Query: 77 EKHDCDFLIEGHADEL--GSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMP 133
++ S + L RA AV +R+ YG + P
Sbjct: 287 REYPNSSASIEGHASKTGPSARYNQRLSEARAIAVKTMLTNEFGVAPNRLSTVGYGYDRP 346
Query: 134 SVYGHDEDAYAKNRRAIVFLKGCRANT 160
E+ A NRR + G ++ T
Sbjct: 347 IAPNDTEEGRAMNRRVYAVITGNKSMT 373
>gi|261252511|ref|ZP_05945084.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
orientalis CIP 102891]
gi|260935902|gb|EEX91891.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
orientalis CIP 102891]
Length = 176
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 50/176 (28%), Positives = 80/176 (45%), Gaps = 25/176 (14%)
Query: 1 MQYST----IFIILSAITMMSISGIDNLDTK-------------------ISSPDTVLNE 37
MQ + + I L + + + S D+ + L E
Sbjct: 1 MQLNKVLKGLLIALPVLAVTACSSSDDAANASGSTETNQTQVVDNNTAVTPIDANGQLTE 60
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRN 96
L+EQ + +++F + +I ++L+ + + + IEGHADE G+
Sbjct: 61 QELKEQ-ALRETQTIYFAFDNSTIAGDYEEMLAAHAAYLSKNPALEVTIEGHADERGTPE 119
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+IALG RRA AV Y A G+ A ++ + SYG+E P + G ED YAKNRRA++
Sbjct: 120 YNIALGERRANAVAKYLQALGVQADQISIVSYGEEKPLLLGQSEDVYAKNRRAVLV 175
>gi|159045565|ref|YP_001534359.1| OmpA/MotB domain-containing protein [Dinoroseobacter shibae DFL 12]
gi|157913325|gb|ABV94758.1| OmpA/MotB domain protein [Dinoroseobacter shibae DFL 12]
Length = 208
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 52/133 (39%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHD 80
D + + + + + ++ + F S ++ L+ L L + D
Sbjct: 73 QARDLQAELGNDAVQIVNTGSELVVTMPQDILFAVDSAVVQSTLQSDLAALSRNLLDYPD 132
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ GH D GS + L RRA AV + G+ +SR+ G++ P DE
Sbjct: 133 TTVQVVGHTDNTGSAGYNQELSQRRASAVAAILLQNGVPSSRVVAFGRGEDQPIASNLDE 192
Query: 141 DAYAKNRRAIVFL 153
A+NRR + +
Sbjct: 193 AGRAQNRRVEIII 205
>gi|89074695|ref|ZP_01161153.1| Putative OmpA family protein [Photobacterium sp. SKA34]
gi|89049459|gb|EAR55020.1| Putative OmpA family protein [Photobacterium sp. SKA34]
Length = 229
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 56/135 (41%), Gaps = 1/135 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
+ + + + + + ++ + + F ++ + L N+ ++++
Sbjct: 92 VQEAKLRKQLSSSGITVTRNGDNIVLNMPNEITFGFDQANLNDRAMNALHNVAIVAKEYE 151
Query: 81 -CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ G D G+ + ++ L RA AV NY + +G++A+R+ G+ P
Sbjct: 152 KTQLNVLGFTDSKGAESYNLRLSQVRADAVANYLIRQGVNANRVVSQGRGESNPIASNST 211
Query: 140 EDAYAKNRRAIVFLK 154
+ A+NRR + L
Sbjct: 212 SNGRAQNRRVEIILS 226
>gi|323495160|ref|ZP_08100245.1| peptidoglycan-associated lipoprotein [Vibrio brasiliensis LMG
20546]
gi|323310600|gb|EGA63779.1| peptidoglycan-associated lipoprotein [Vibrio brasiliensis LMG
20546]
Length = 175
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 47/174 (27%), Positives = 80/174 (45%), Gaps = 22/174 (12%)
Query: 1 MQYST----IFIILSAITMMSISGIDNLDTKISSPDTVLNES-----------------S 39
MQ + + I L + + + S D+ S +T ++
Sbjct: 1 MQLNKVLKGLLIALPVLAVTACSSSDDAANASGSTETNQTQTVDNTVVSPIDQNGQLSEQ 60
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSS 98
++ + +++F + +I ++L+ + + + IEGHADE G+ +
Sbjct: 61 ELKEQALRETQTIYFAFDNSTIAGDYEEMLAAHAAYLSKNPALNVTIEGHADERGTPEYN 120
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
IALG RRA AV Y A G+ A ++ + SYG+E P + G ED YAKNRRA++
Sbjct: 121 IALGERRATAVAKYLQALGVQADQISIVSYGEEKPLLLGQSEDVYAKNRRAVLV 174
>gi|319653376|ref|ZP_08007476.1| flagellar motor protein [Bacillus sp. 2_A_57_CT2]
gi|317394860|gb|EFV75598.1| flagellar motor protein [Bacillus sp. 2_A_57_CT2]
Length = 265
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 48/134 (35%), Gaps = 6/134 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
L S E S+ D+V F + S +R D+ + S + + + +I GH D
Sbjct: 130 ADKLETSLTTEGLLVSIRDNVLFGSGSAEVREQDLNMASEIAELLIMDPPRNIIISGHTD 189
Query: 91 ELGSRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ RNSS R + + +G+ P + ++ AK
Sbjct: 190 NVPIRNSSFESNWELSVMRAVNFMKIILKNDQLDPKWFSAKGFGEFQPVAGNNTKEGRAK 249
Query: 146 NRRAIVFLKGCRAN 159
NRR + + N
Sbjct: 250 NRRVEILILPRTGN 263
>gi|259907293|ref|YP_002647649.1| hypothetical protein EpC_06170 [Erwinia pyrifoliae Ep1/96]
gi|224962915|emb|CAX54396.1| Type VI secretion system, OmpA/MotB [Erwinia pyrifoliae Ep1/96]
gi|283477112|emb|CAY73012.1| putative type VI secretion system, core protein [Erwinia pyrifoliae
DSM 12163]
Length = 413
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 49/138 (35%), Gaps = 4/138 (2%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
K ++ ++ ++ F ++S +R +VL + + + L+
Sbjct: 265 KPEIEQGLVVVRDEADRSVVTLKGDGLFTSASTDVRGRYAEVLDRVAAAMNNVSGRILVV 324
Query: 87 GHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
G++D + S+ L L RA +V R+K G P +
Sbjct: 325 GYSDNVPIRSARFASNYELSLARAQSVSEQLQQHLTQPQRVKAEGRGDSNPLAPNNSAGN 384
Query: 143 YAKNRRAIVFLKGCRANT 160
A+NRR + L +T
Sbjct: 385 RARNRRVEITLLVSPGST 402
>gi|220934640|ref|YP_002513539.1| OmpA/MotB domain protein [Thioalkalivibrio sp. HL-EbGR7]
gi|219995950|gb|ACL72552.1| OmpA/MotB domain protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 227
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 2/116 (1%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK--HDCDFLIEGHADELGSRNSSIALGLR 104
++G + F +S +I P L L S L + + + + GH D G+ + ++ L R
Sbjct: 109 TLGAAALFAINSAAISPQGRAELDQLVSDLARLDNVQNIHVVGHTDNTGAADYNMDLSKR 168
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
RA +V Y V +GI A + G P + A+NRR + ++G T
Sbjct: 169 RAESVKAYLVEKGIRADLITTEGRGITQPVASNATTEGRAQNRRVEITIRGTETVT 224
>gi|148652725|ref|YP_001279818.1| peptidoglycan-associated lipoprotein [Psychrobacter sp. PRwf-1]
gi|148571809|gb|ABQ93868.1| Peptidoglycan-associated lipoprotein [Psychrobacter sp. PRwf-1]
Length = 170
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 43/164 (26%), Positives = 70/164 (42%), Gaps = 15/164 (9%)
Query: 3 YSTIFIILSAITMMSISGIDNLDT--------------KISSPDTVLNESSLQEQFSSSV 48
I L + ++ +G + +++ S + + +V
Sbjct: 5 LKISAISLVSAALLVTTGCASKSNTSEFVVAPMAVPGNAAYQTGPLVSNSEQVQADAQNV 64
Query: 49 GDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
V F SY I +L + D L+ GH DE GS + ALG RRA
Sbjct: 65 RSVVRFAFDSYDIDAEAANILDEQVAFLSSHPDARVLVAGHTDERGSSEYNHALGERRAQ 124
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
AV +Y ++GI +R++ SYG++ P G DE +Y++NRRA +
Sbjct: 125 AVRSYLASKGIMDARVETISYGEDRPVAAGSDEASYSQNRRAEL 168
>gi|310765213|gb|ADP10163.1| OmpA family protein [Erwinia sp. Ejp617]
Length = 413
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 49/138 (35%), Gaps = 4/138 (2%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
K ++ ++ ++ F ++S +R +VL + + + L+
Sbjct: 265 KPEIEQGLVVVRDEADRSVVTLKGDGLFTSASTDVRGRYAEVLDRVAAAMNNVSGRILVV 324
Query: 87 GHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
G++D + S+ L L RA +V R+K G P +
Sbjct: 325 GYSDNVPIRSARFASNYELSLARAQSVSEQLQQHLTQPQRVKAEGRGDSNPLAPNNSAGN 384
Query: 143 YAKNRRAIVFLKGCRANT 160
A+NRR + L +T
Sbjct: 385 RARNRRVEITLLVSPGST 402
>gi|264677754|ref|YP_003277660.1| OmpA/MotB [Comamonas testosteroni CNB-2]
gi|299529322|ref|ZP_07042761.1| OmpA/MotB [Comamonas testosteroni S44]
gi|262208266|gb|ACY32364.1| OmpA/MotB [Comamonas testosteroni CNB-2]
gi|298722700|gb|EFI63618.1| OmpA/MotB [Comamonas testosteroni S44]
Length = 175
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 2/139 (1%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+G S + ++ + V V+FD SYS++ +
Sbjct: 35 LSSQGAGTSGQGQSGVSGVDLTGSAASKAG-PQGVSRIVYFDFDSYSVKADAQPQIEAHA 93
Query: 74 SWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
+++ + +EGH DE G R ++ALG +RA AV G++ ++++ SYGKE
Sbjct: 94 KFIKANPAAKVQLEGHTDERGGREYNLALGQKRAEAVRRSLGLLGVNDAQVEAVSYGKEK 153
Query: 133 PSVYGHDEDAYAKNRRAIV 151
P+ GH EDAYA+NRR +
Sbjct: 154 PAAEGHSEDAYAQNRRVEI 172
>gi|289208562|ref|YP_003460628.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
gi|288944193|gb|ADC71892.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
Length = 238
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFN 111
F+T+S I P + L LG LE++D I GH D G+R + L +RA +V
Sbjct: 131 AFETNSAEIHPDMVSTLDALGQVLEEYDASLVTIAGHTDSAGARGYNQHLSEQRALSVGR 190
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
+ G+ +R+ YG + P A NRR + ++ A
Sbjct: 191 HLHDNGVGEARIIAIGYGPDRPIADNDTPHGRALNRRVELRVEPLTA 237
>gi|146307342|ref|YP_001187807.1| hypothetical protein Pmen_2317 [Pseudomonas mendocina ymp]
gi|145575543|gb|ABP85075.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp]
Length = 453
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 41/123 (33%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+ ++ ++ F + S SI +L + + + + L+ GH+D+
Sbjct: 325 VAVEDAVDRSVVTIRGDELFASGSASISDNLQPLLLRIAEAIRQVKGNVLVTGHSDDRPI 384
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
S+ L RA V + AR R P A+NRR
Sbjct: 385 ATLRYPSNWKLSQDRAQQVMDVLAARSGQPERFTAEGRSDTEPVASNESAAGRARNRRVE 444
Query: 151 VFL 153
+ +
Sbjct: 445 ITV 447
>gi|325279362|ref|YP_004251904.1| OmpA/MotB domain-containing protein [Odoribacter splanchnicus DSM
20712]
gi|324311171|gb|ADY31724.1| OmpA/MotB domain protein [Odoribacter splanchnicus DSM 20712]
Length = 235
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 57/135 (42%), Gaps = 3/135 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQ--EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK- 78
+ + V + + + + + + F T+ + PA + L+ + L+
Sbjct: 85 QKKELEAIEGAKVESVQDVNNLQAIKVTFDNGILFATNKSELSPASREALTKFATSLKNS 144
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
D D I GH D G+R + + RA AV N+ V +GIS SR+ + P
Sbjct: 145 PDTDVTIYGHTDNTGTRAVNERISKERADAVANFLVGQGISRSRLTTEGLAFDQPVADNS 204
Query: 139 DEDAYAKNRRAIVFL 153
+ A+NRR +++
Sbjct: 205 TAEGRAQNRRVEIYI 219
>gi|322834544|ref|YP_004214571.1| OmpA/MotB domain protein [Rahnella sp. Y9602]
gi|321169745|gb|ADW75444.1| OmpA/MotB domain protein [Rahnella sp. Y9602]
Length = 165
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 54/157 (34%), Gaps = 6/157 (3%)
Query: 3 YSTIF-IILSAITMMSISGIDNLDTKISSPDTVLNES----SLQEQFSSSVGDSVFFDTS 57
+ T F + ++ ++ ++ + + E + + V F +
Sbjct: 7 FKTWFQFAAMGLCILLLAACQTKPAGLTPEQIAVLQKNGFSQTAEGWELGLDAKVLFGNN 66
Query: 58 SYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
++ Q + L S L ++GH D G + L LRRA V F
Sbjct: 67 QATLSTESKQSVEKLASELLHVGLNKVNLDGHTDNYGDAGYNNDLSLRRANTVAAAFADA 126
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G+ + + G+ P + A+NRR V +
Sbjct: 127 GMPRANIHTRGLGQSQPVASNKTQAGRAQNRRVSVII 163
>gi|315224547|ref|ZP_07866374.1| OmpA family protein [Capnocytophaga ochracea F0287]
gi|314945568|gb|EFS97590.1| OmpA family protein [Capnocytophaga ochracea F0287]
Length = 230
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 4/150 (2%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDS---VFFDTSSYSIRPA 64
++ A + + +D KI + + + + ++ V+FDT+ Y+I
Sbjct: 64 VVGGAAGAVIGNQMDKQAKKIEEEIPGADVKRVDDGIVVTFDENNGGVYFDTNKYNINNK 123
Query: 65 DIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
Q L L E D + ++ GH D +G ++ L RRA AV NYF ++G++ SR
Sbjct: 124 SRQTLDKLSAILKEYPDTNVIVAGHTDNVGKDEYNLGLSQRRAQAVTNYFKSKGLAGSRF 183
Query: 124 KVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
YG+ P D AKNRR V +
Sbjct: 184 TTKWYGERNPVASNETADGRAKNRRVNVVI 213
>gi|149917241|ref|ZP_01905740.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
gi|149821848|gb|EDM81242.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
Length = 188
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 27/160 (16%), Positives = 60/160 (37%), Gaps = 14/160 (8%)
Query: 8 IILSAITMMSISG-----------IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDT 56
++++A+ +S G I+ + ++ + + + F+
Sbjct: 1 MLVAALVSLSACGPRVFEGESAKVIEATELPPPPEPPKVDARVEVTDDKIVIHEKIAFEY 60
Query: 57 SSYSIRPADIQVLSNLGSW--LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
+ I+ +L+ + +EGHA G + ++ L RRA AV + V
Sbjct: 61 DAAKIQRVSHDLLAEVAQVILDNPRIELIRVEGHASAEGEADHNLELSQRRAEAVRAHLV 120
Query: 115 ARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+G R++ +G++ P E+ +NRR +
Sbjct: 121 KKGGVPEARLEAEGFGEDRPIADNETEEGRGQNRRVEFVI 160
>gi|254465277|ref|ZP_05078688.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
gi|206686185|gb|EDZ46667.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
Length = 172
Score = 81.0 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 49/120 (40%), Positives = 66/120 (55%), Gaps = 1/120 (0%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
+ + F +VGD V F +++ PA L W + D IEGHADE G+R
Sbjct: 49 DPASPAYFQQTVGDRVLFAIDQHTLSPAAQATLQGQARWLAQNGDYAVTIEGHADEQGTR 108
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
++ LG +RA A Y +++GIS SR+KV SYGKE P DE Y+KNRRA+ L G
Sbjct: 109 EYNLGLGAKRANAAREYLISQGISGSRIKVVSYGKERPLEICSDETCYSKNRRAVTVLAG 168
>gi|294631150|ref|ZP_06709710.1| secreted protein [Streptomyces sp. e14]
gi|292834483|gb|EFF92832.1| secreted protein [Streptomyces sp. e14]
Length = 215
Score = 81.0 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 45/141 (31%), Gaps = 2/141 (1%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
++ + ++ + + + ++ V F S + + +
Sbjct: 69 ATLAAPKVLDIKSVVEDQGGEERREDTNTDVTFALQAEVLFPKDSAKLSDQAKSRIDAIA 128
Query: 74 SWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKE 131
++K + G D LGS + L +RA AV + V Y ++
Sbjct: 129 QEIKKQHATQVRVFGFTDNLGSHEHGVVLSKQRANAVQDVLSQELNDPDITFDVRGYAED 188
Query: 132 MPSVYGHDEDAYAKNRRAIVF 152
P ED KNRR V
Sbjct: 189 YPIADNSTEDGRKKNRRVEVT 209
>gi|171463937|ref|YP_001798050.1| OmpA/MotB domain protein [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171193475|gb|ACB44436.1| OmpA/MotB domain protein [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 188
Score = 81.0 bits (198), Expect = 6e-14, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 1/128 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE-GHAD 90
+ + +S Q ++ +D + ++P L + + L+K + +I G+ D
Sbjct: 60 GALTSAASDVSQSKITLQADTLYDFNKSDLKPEGKATLDKIAADLKKIKLEVIITVGNTD 119
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
+G+ ++ALG RRA +V Y V++ + SR+ S GK P + AKNRR
Sbjct: 120 SVGTDAYNMALGQRRAQSVKTYLVSKDVDGSRIYTESKGKSNPVASNATAEGRAKNRRTD 179
Query: 151 VFLKGCRA 158
+ + G A
Sbjct: 180 IEVVGTAA 187
>gi|262371451|ref|ZP_06064767.1| outer membrane protein A precursor [Acinetobacter johnsonii SH046]
gi|262313590|gb|EEY94641.1| outer membrane protein A precursor [Acinetobacter johnsonii SH046]
Length = 159
Score = 80.6 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 31/157 (19%), Positives = 61/157 (38%), Gaps = 4/157 (2%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESS---LQEQFSSSVGDSVFFDTS 57
M +L A + ++SG +L +L + +E ++ + + + F
Sbjct: 1 MLKHLCKFMLIAGLITALSGCLSLGHLNYKQARMLKKQGFTLTEEGWTLRLPEKLLFGFD 60
Query: 58 SYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
I+ + L L L++++ + GH D +G + + L +RA V F+
Sbjct: 61 QSDIQASQKPALEALSKQLQQYNLNKIKVVGHTDNIGDPSYNQTLSEKRASTVSQIFIET 120
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G ++ G P V E+ A NRR + +
Sbjct: 121 GFKTQNIQSMGRGASQPLVENSSEENRALNRRVNIII 157
>gi|88705612|ref|ZP_01103322.1| conserved hypothetical protein, secreted [Congregibacter litoralis
KT71]
gi|88700125|gb|EAQ97234.1| conserved hypothetical protein, secreted [Congregibacter litoralis
KT71]
Length = 181
Score = 80.6 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 41/173 (23%), Positives = 82/173 (47%), Gaps = 24/173 (13%)
Query: 4 STIFIILSAITMMSISGIDNLDTKISSPDTVLNESSL----------------------- 40
+ ++ +A+ +++ SG + + ++ +
Sbjct: 9 KALTLLFAAMFLVACSGTSTKEEEAAAAAAAAAAAEQAAAADAAREAERQAQAAAAEAQR 68
Query: 41 -QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSI 99
EQ + + G +F+ S ++ PA + + L+ +D ++GH DE G+R+ ++
Sbjct: 69 QMEQAAMAAGTVFYFEFDSATLTPAAQAAVDAHIALLKTNDRSVRLDGHTDERGTRDYNM 128
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
ALG RRA AV +Y V G+++ R++ SYG+E P YG E ++++NRR +
Sbjct: 129 ALGERRANAVRDYMVVNGVASYRIETVSYGEEQPVAYGSGESSWSQNRRVELK 181
>gi|237742848|ref|ZP_04573329.1| outer membrane protein [Fusobacterium sp. 4_1_13]
gi|229430496|gb|EEO40708.1| outer membrane protein [Fusobacterium sp. 4_1_13]
Length = 164
Score = 80.6 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 3/128 (2%)
Query: 34 VLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG 93
L E +E ++ FD ++P ++L+NL ++ K+D + IEGH D +
Sbjct: 18 ALKEEPPEEMTIVLDDRALNFDFDKSFVKPQYDEMLTNLKEFIMKNDYELTIEGHTDYIA 77
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKV-TSYGKEMPSVYGHDEDAYAKNRRAIVF 152
S ++ L RRA AV + G+ SR+ G+E P + AKNRR
Sbjct: 78 SNQYNMGLSKRRAEAVKAKLIELGLDPSRIVAIVPKGEEEPVADNKTTEGRAKNRRVEFK 137
Query: 153 L--KGCRA 158
L +G +
Sbjct: 138 LVKRGSKG 145
>gi|91792625|ref|YP_562276.1| OmpA/MotB [Shewanella denitrificans OS217]
gi|91714627|gb|ABE54553.1| OmpA/MotB [Shewanella denitrificans OS217]
Length = 223
Score = 80.6 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHAD 90
T ++ + + ++ + V F + +VL+++ ++ D I G+ D
Sbjct: 97 STGVSVTRSGDNIILNMPNDVTFGVDETVLSSRAKEVLASVALVAKEFDDTRLHITGYTD 156
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + ++ L RA V Y + + ++A+R+ + G+ P A+NRR
Sbjct: 157 SSGSDSYNLRLSQVRANEVGQYLMQQKVAANRVVSSGRGESSPIADNGTPAGRAQNRRVE 216
Query: 151 VFLK 154
+ L
Sbjct: 217 IVLS 220
>gi|254787356|ref|YP_003074785.1| thrombospondin type 3 repeat family protein [Teredinibacter turnerae
T7901]
gi|237685616|gb|ACR12880.1| thrombospondin type 3 repeat family protein [Teredinibacter turnerae
T7901]
Length = 3177
Score = 80.6 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 52/136 (38%), Gaps = 6/136 (4%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE--KH 79
D D +P+ V + S +V F +S + L L + +
Sbjct: 3045 DADDQCPQTPEGVAVNHFGCPEIS---PVTVHFAFNSAVLSAETQAQLDALAQGVAAANY 3101
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGH 138
D I GHAD +GS + L +RA AV NY R +A + YG+ P +
Sbjct: 3102 DFRVKIAGHADWVGSEAFNQGLSEKRANAVANYLSERLQLNAEKWDTRGYGEVKPVADNN 3161
Query: 139 DEDAYAKNRRAIVFLK 154
A+NRR + K
Sbjct: 3162 SAQGRAQNRRVEITFK 3177
>gi|197124706|ref|YP_002136657.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K]
gi|196174555|gb|ACG75528.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K]
Length = 206
Score = 80.6 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 53/130 (40%), Gaps = 1/130 (0%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDF 83
D + + + + + + FD+ S +++P I L +G + D
Sbjct: 71 DKQHKELEKIAETKRTENGLLVEMKGDILFDSGSSALKPEAISKLEQMGDVLAKYGDDRI 130
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
IEG+ D GS++ + L LRRA AV V RG+ ++ G P
Sbjct: 131 RIEGYTDATGSKSMNEELSLRRADAVKRVLVGRGVQEKQITALGMGPVRPVADNGTASGR 190
Query: 144 AKNRRAIVFL 153
A+NRR + +
Sbjct: 191 AQNRRVELHI 200
>gi|153870010|ref|ZP_01999498.1| OmpA/MotB [Beggiatoa sp. PS]
gi|152073520|gb|EDN70498.1| OmpA/MotB [Beggiatoa sp. PS]
Length = 296
Score = 80.6 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 42/109 (38%), Gaps = 1/109 (0%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRR 105
++ V F ++ P L L + + GH D +G + + L +R
Sbjct: 182 TLQGDVTFAFDKAALTPQAKTTLEGLINEFGLDFIKGIEVIGHTDSIGKDSYNQKLSEQR 241
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
A +V Y ++ S++ G+ P + A+NRR + ++
Sbjct: 242 AASVVRYLQVLNVNTSKINGWGEGERNPVAPNDTREGRAQNRRVEIKIE 290
>gi|108757075|ref|YP_633305.1| OmpA family protein [Myxococcus xanthus DK 1622]
gi|17863963|gb|AAL46989.1|AF448145_1 unknown [Myxococcus xanthus]
gi|108460955|gb|ABF86140.1| OmpA family protein [Myxococcus xanthus DK 1622]
Length = 249
Score = 80.6 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 57/134 (42%), Gaps = 5/134 (3%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
S D + + + S+ + +S V F + + Q LS+L ++
Sbjct: 119 ASSSDCGEGQECQAGQCVTASAERCDWSP-----VPFGFNESGLSADAQQRLSDLAQCMK 173
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+ GHADE G+ ++ L RRA +V Y G+ AS++ YG+ P
Sbjct: 174 TAPGRVTLAGHADERGTEEYNLQLSNRRAASVKRYLTDLGVPASQLGTVGYGETRPVNSA 233
Query: 138 HDEDAYAKNRRAIV 151
EDA+++NRR
Sbjct: 234 SSEDAWSENRRVEF 247
>gi|253771615|ref|YP_003034446.1| outer membrane lipoprotein [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254163475|ref|YP_003046583.1| putative outer membrane lipoprotein [Escherichia coli B str.
REL606]
gi|297520666|ref|ZP_06939052.1| putative outer membrane lipoprotein [Escherichia coli OP50]
gi|300928223|ref|ZP_07143762.1| OmpA family protein [Escherichia coli MS 187-1]
gi|242379069|emb|CAQ33870.1| predicted outer membrane lipoprotein [Escherichia coli BL21(DE3)]
gi|253322659|gb|ACT27261.1| OmpA/MotB domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|253975376|gb|ACT41047.1| predicted outer membrane lipoprotein [Escherichia coli B str.
REL606]
gi|253979532|gb|ACT45202.1| predicted outer membrane lipoprotein [Escherichia coli BL21(DE3)]
gi|300463768|gb|EFK27261.1| OmpA family protein [Escherichia coli MS 187-1]
Length = 219
Score = 80.6 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD+SS +++PA L+ + L+++ + G+ D
Sbjct: 94 GTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + ++ L +RA +V + + +G+ ASR++ G P + A+NRR
Sbjct: 154 STGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVE 213
Query: 151 VFLK 154
+ L
Sbjct: 214 ITLS 217
>gi|226952116|ref|ZP_03822580.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter sp.
ATCC 27244]
gi|294648350|ref|ZP_06725858.1| peptidoglycan-associated lipoprotein [Acinetobacter haemolyticus
ATCC 19194]
gi|226837144|gb|EEH69527.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter sp.
ATCC 27244]
gi|292825762|gb|EFF84457.1| peptidoglycan-associated lipoprotein [Acinetobacter haemolyticus
ATCC 19194]
Length = 187
Score = 80.6 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 44/176 (25%), Positives = 74/176 (42%), Gaps = 26/176 (14%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSV------------ 48
M+Y + +++A + + T I++ +T + E S
Sbjct: 3 MKYLS-LPLIAATLVFTGCASRKPATDITAGNTPTGTTVSTEGLSEDAALNAQNLAGASA 61
Query: 49 ------------GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
V FD S + D Q L + + + + GH DE G+R
Sbjct: 62 KGVTAANKAFLAKRVVHFDYDSSELSNEDYQTLQAHAQFLVANANSRVALTGHTDERGTR 121
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
++ALG RRA AV ++ V G++ +++ SYGKE P GH+E A+ +NRR +
Sbjct: 122 EYNMALGERRAKAVESFLVTNGVNPQQLEAVSYGKEAPVNPGHNEAAWKENRRVEI 177
>gi|330447262|ref|ZP_08310912.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328491453|dbj|GAA05409.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 223
Score = 80.6 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 56/135 (41%), Gaps = 1/135 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
+ + + ++ + ++ + + F ++ + L N+ +++
Sbjct: 86 VQEAKLRQQLASSGISVTRDGNNIILNMPNEITFGFDQANLNDRAMNALHNVALVAKEYP 145
Query: 81 -CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ G D G+ + ++ L RA AV NY + +G++A+R+ G+ P
Sbjct: 146 KTQLNVLGFTDSKGAASYNLRLSQVRADAVGNYLIRQGVNANRVISQGRGEANPIASNST 205
Query: 140 EDAYAKNRRAIVFLK 154
E+ A+NRR + L
Sbjct: 206 ENGRAQNRRVEIILS 220
>gi|149377133|ref|ZP_01894882.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Marinobacter algicola DG893]
gi|149358551|gb|EDM47024.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Marinobacter algicola DG893]
Length = 222
Score = 80.6 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 1/113 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADELGSRNSSIA 100
++ + ++ FD + SI+P+ L ++ L++ D + IEGH D GSR+ +
Sbjct: 106 DEIELVMPGNITFDVNQSSIKPSFSNTLESVALVLKEFDKTIIQIEGHTDSTGSRDYNQL 165
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RRA +V ++ + +GI R + T YG P E +NRR + L
Sbjct: 166 LSERRAGSVRDFLLNQGIEPKRTRATGYGPRYPIASNDTESGREQNRRVELTL 218
>gi|78189006|ref|YP_379344.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins-like [Chlorobium chlorochromatii CaD3]
gi|78171205|gb|ABB28301.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins-like protein [Chlorobium chlorochromatii
CaD3]
Length = 183
Score = 80.6 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAV 109
VFFD + + + L +W++ H + +IEGH DE G+ +IALG RRA +
Sbjct: 79 DVFFDFNKSELGTTRNEQLKRNANWIKAHPTSNIIIEGHCDERGTNEYNIALGERRANSA 138
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+Y V G+ +R+ SYG+E P G E+A+A+NRR
Sbjct: 139 KDYMVTLGVDPARLTTVSYGEEKPVAIGSTEEAWAQNRRVHFI 181
>gi|256419485|ref|YP_003120138.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
gi|256034393|gb|ACU57937.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
Length = 225
Score = 80.6 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
D +I + + E + + V F + Q + +L + + D
Sbjct: 77 DKQAQEIKTEVPNATVERVGEGINVTFASGVLFGFDKSDLTGQAQQNIKDLATILNKYPD 136
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+EGH D G+ + ++ L RRA AV Y ++G++ASR++ YG P V + +
Sbjct: 137 TYVRVEGHTDTTGTDSYNMGLSERRANAVATYLKSQGVAASRVQTFWYGARQPVVPNNSD 196
Query: 141 DAYAKNRRAIVFL 153
AKNRR +
Sbjct: 197 ANKAKNRRVEFSI 209
>gi|15595276|ref|NP_248768.1| hypothetical protein PA0078 [Pseudomonas aeruginosa PAO1]
gi|116054405|ref|YP_788234.1| hypothetical protein PA14_00925 [Pseudomonas aeruginosa UCBPP-PA14]
gi|254243187|ref|ZP_04936509.1| hypothetical protein PA2G_03990 [Pseudomonas aeruginosa 2192]
gi|296386560|ref|ZP_06876059.1| hypothetical protein PaerPAb_00450 [Pseudomonas aeruginosa PAb1]
gi|9945903|gb|AAG03468.1|AE004447_1 hypothetical protein PA0078 [Pseudomonas aeruginosa PAO1]
gi|115589626|gb|ABJ15641.1| hypothetical protein PA14_00925 [Pseudomonas aeruginosa UCBPP-PA14]
gi|126196565|gb|EAZ60628.1| hypothetical protein PA2G_03990 [Pseudomonas aeruginosa 2192]
Length = 449
Score = 80.6 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 42/123 (34%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+ ++ ++ F ++S S+R +L + L K L+ GH+D
Sbjct: 321 VAVEDAVDRSVVTIRGDELFASASASVRDEFQPLLLRIADALRKVKGQVLVTGHSDNRPI 380
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
S+ L RA V + A A R P + A+NRR
Sbjct: 381 ATLRYPSNWKLSQARAQEVADLLGATTGDAGRFTAEGRSDTEPVATNASAEGRARNRRVE 440
Query: 151 VFL 153
+ +
Sbjct: 441 ITV 443
>gi|206577657|ref|YP_002237882.1| OmpA domain protein [Klebsiella pneumoniae 342]
gi|206566715|gb|ACI08491.1| OmpA domain protein [Klebsiella pneumoniae 342]
Length = 565
Score = 80.6 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 52/125 (41%), Gaps = 2/125 (1%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELG 93
+ + +Q + + FDT +++P ++L N L K ++ GH D +G
Sbjct: 417 VIKQVVQGPQTIRLDSMALFDTGKSTLKPGSTKLLVNSLLGIKAKPGWLIVVAGHTDSIG 476
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ S+ L L+RA AV ++ G V YG P + AKNRR +
Sbjct: 477 NDKSNQQLSLKRAEAVRDWMRDTGDVPESCFAVQGYGASRPVASNETPEGRAKNRRVEIS 536
Query: 153 LKGCR 157
L +
Sbjct: 537 LVPQK 541
>gi|149377921|ref|ZP_01895649.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Marinobacter algicola DG893]
gi|149357811|gb|EDM46305.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Marinobacter algicola DG893]
Length = 402
Score = 80.6 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 2/143 (1%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
++ D + D + ++ +V F T+S I A + + +++
Sbjct: 260 VVNSADQCPGTTAGADVDAMGCEGVTETVETIELNVQFPTNSSVIGNAFDNEIRRVANFM 319
Query: 77 -EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPS 134
E + + I GH+D +G + L RRA AV A GIS R+ YG+ P
Sbjct: 320 LEYPETNVEIAGHSDSIGEAEYNRFLSQRRAEAVATRLTDALGISEDRVNAVGYGESEPV 379
Query: 135 VYGHDEDAYAKNRRAIVFLKGCR 157
A+NRR ++ R
Sbjct: 380 ASNDTAAGRAENRRVEARIQVRR 402
>gi|108759418|ref|YP_635012.1| OmpA domain-containing protein [Myxococcus xanthus DK 1622]
gi|108463298|gb|ABF88483.1| OmpA domain protein [Myxococcus xanthus DK 1622]
Length = 543
Score = 80.6 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 55/140 (39%), Gaps = 6/140 (4%)
Query: 21 IDNLDTKISSPDTVLNES----SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+D LD P + + ++ + + + F T I +L + +
Sbjct: 362 VDRLDRCPDQPAGSRGKDGCPLARRDGNRIVILEQLNFATDQDIILSESFPILEEVARVM 421
Query: 77 EKHDC--DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
++ +EGH D S ++ L RRA +V + V G++A R+ +G+ P
Sbjct: 422 NENTEADRVHVEGHTDSRASDAYNLDLSRRRAASVMRFLVESGVAAERLCSQGFGRSRPL 481
Query: 135 VYGHDEDAYAKNRRAIVFLK 154
E+ A NRR ++
Sbjct: 482 ADNATEEGMALNRRVDFTIQ 501
>gi|78223923|ref|YP_385670.1| OmpA/MotB [Geobacter metallireducens GS-15]
gi|78195178|gb|ABB32945.1| OmpA/MotB [Geobacter metallireducens GS-15]
Length = 398
Score = 80.6 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
D + F+T S ++P+ + L N+ + L+ I G+ D +G +++ L RA
Sbjct: 291 DRLQFETGSAVLKPSSQEQLGNIAAILKAFPQVAIKIGGYTDNVGDPQANLKLSRDRASN 350
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V GI SR++ YG+E P E+ +NRR V +
Sbjct: 351 TMQELVKLGIDPSRLESEGYGEEHPVADNATEEGRQQNRRIDVRV 395
>gi|27365501|ref|NP_761029.1| peptidoglycan-associated lipoprotein [Vibrio vulnificus CMCP6]
gi|37680458|ref|NP_935067.1| peptidoglycan-associated lipoprotein [Vibrio vulnificus YJ016]
gi|320155883|ref|YP_004188262.1| 18K peptidoglycan-associated outer membrane lipoprotein [Vibrio
vulnificus MO6-24/O]
gi|27361649|gb|AAO10556.1| peptidoglycan-associated lipoprotein [Vibrio vulnificus CMCP6]
gi|37199206|dbj|BAC95038.1| peptidoglycan-associated lipoprotein [Vibrio vulnificus YJ016]
gi|319931195|gb|ADV86059.1| 18K peptidoglycan-associated outer membrane lipoprotein/
Peptidoglycan-associated lipoprotein precursor/ Outer
membrane protein P6/ OmpA/MotB precursor [Vibrio
vulnificus MO6-24/O]
Length = 181
Score = 80.6 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 46/141 (32%), Positives = 73/141 (51%), Gaps = 2/141 (1%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS-N 71
T S + D + L+E L+EQ + +++F + +I ++L+ +
Sbjct: 41 TTSGSANTTDTTVVTPIDQNGQLSEQELKEQ-ALRETQTIYFAFDNATISSDYEEMLAAH 99
Query: 72 LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
+ + IEGHADE G+ +IALG RRA AV Y A G+ A ++ + SYG+E
Sbjct: 100 AAYLSKNVNLKVTIEGHADERGTPEYNIALGERRAQAVAKYLQALGVQADQIAIVSYGEE 159
Query: 132 MPSVYGHDEDAYAKNRRAIVF 152
P + G E+ YAKNRRA++
Sbjct: 160 KPLLLGQTEEVYAKNRRAVLV 180
>gi|99078059|ref|YP_611317.1| OmpA/MotB [Ruegeria sp. TM1040]
gi|99035197|gb|ABF62055.1| OmpA/MotB [Ruegeria sp. TM1040]
Length = 653
Score = 80.6 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 49/131 (37%), Gaps = 3/131 (2%)
Query: 26 TKISSPDTVLNESSL--QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCD 82
K P+ L L E + D + F+ S ++ +V+ + L++ +
Sbjct: 469 EKPPEPEDKLMAPQLCEAELAAIQRADKIAFEPGSATVAADSARVIDKIAKLLQQCGEIP 528
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
I+GH D G + L RA +V N AR I YG++ P E+
Sbjct: 529 LEIQGHTDSQGREEMNQNLSQARAQSVLNALRARRILTGSFVARGYGEDNPIASNDTEEG 588
Query: 143 YAKNRRAIVFL 153
NRR L
Sbjct: 589 REANRRIEFRL 599
>gi|299769114|ref|YP_003731140.1| peptidoglycan-associated lipoprotein [Acinetobacter sp. DR1]
gi|298699202|gb|ADI89767.1| peptidoglycan-associated lipoprotein [Acinetobacter sp. DR1]
Length = 186
Score = 80.6 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 17/166 (10%)
Query: 3 YSTIFIILSAITM-------MSISGIDNLDTKISSPDTVLNESS---------LQEQFSS 46
+ ++ ++++ + + ++T S D LN + + ++
Sbjct: 11 FLSVALVMTGCASRKPATTTATGTNPSTVNTSGLSEDAALNAQNLAGASSKGVTEANKAA 70
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRR 105
V FD S + D Q L + + + + GH DE G+R ++ALG RR
Sbjct: 71 LAKRVVHFDYDSSDLSTEDYQTLQAHAQFLMANANSKVALTGHTDERGTREYNMALGERR 130
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
A AV +Y + G++ +++ SYGKE P GHDE A+ +NRR +
Sbjct: 131 AKAVQSYLITNGVNPQQLEAVSYGKEAPVNAGHDESAWKENRRVEI 176
>gi|255532299|ref|YP_003092671.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366]
gi|255345283|gb|ACU04609.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366]
Length = 175
Score = 80.6 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 35/173 (20%), Positives = 67/173 (38%), Gaps = 22/173 (12%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSS-------------- 46
M+ TI + A+ + + SP+T +S+ E F+
Sbjct: 1 MRTRTI--VFLALLLPAAYSCKTKKILAKSPETAETKSTDNEIFNIQRELPGDQVERTAA 58
Query: 47 ----SVGDSVFFDTSSYSIRPADIQVLSNLGS--WLEKHDCDFLIEGHADELGSRNSSIA 100
+ + F T+S + + ++ + D L+EGH+D+ G+ ++
Sbjct: 59 GIRFTFSSEILFPTNSSYLNEKSKSRIDDVAKVIRNKYADRKVLVEGHSDKTGTPEYNLW 118
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L +RA +V Y V+ GI + +K + G P ++ NRR V +
Sbjct: 119 LSEKRAASVKTYLVSLGIPEANIKTSGLGDTRPVADNKTKEGRLINRRVEVTV 171
>gi|152970821|ref|YP_001335930.1| hypothetical protein KPN_02274 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|150955670|gb|ABR77700.1| putative exported protein [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
Length = 565
Score = 80.6 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 2/125 (1%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELG 93
+ + +Q + + FDT +++P ++L N L K ++ GH D +G
Sbjct: 417 VIKQVVQGPQTIRLDSMALFDTGKSTLKPGSTKLLVNSLLGIKAKPGWLIVVAGHTDSIG 476
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ S+ L L+RA AV ++ G V YG P + A+NRR +
Sbjct: 477 NDRSNQQLSLKRAEAVRDWMRDTGDVPESCFAVQGYGASRPVASNETPEGRAQNRRVEIS 536
Query: 153 LKGCR 157
L +
Sbjct: 537 LVPQK 541
>gi|148546771|ref|YP_001266873.1| flagellar motor protein MotD [Pseudomonas putida F1]
gi|148510829|gb|ABQ77689.1| OmpA/MotB domain protein [Pseudomonas putida F1]
gi|313497822|gb|ADR59188.1| Flagellar motor protein MotD [Pseudomonas putida BIRD-1]
Length = 285
Score = 80.6 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 24/152 (15%), Positives = 52/152 (34%), Gaps = 13/152 (8%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQF---------SSSVGDSVFFDTSSYSIRPADI 66
++ + +D L T + +Q + S+ F +
Sbjct: 93 LAATNVDPLKTISDDVRDAFGDLINSDQMTVRGNELWVEIELNSSLLFGSGDAMPSDKAF 152
Query: 67 QVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASR 122
++ + + L+ +EG D L ++ L RA ++ G++ +R
Sbjct: 153 AIIEKVANILKPFANPVHVEGFTDNLPIRTAQYPTNWELSSARAASIVRLLAMEGVNPAR 212
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
M YG+ P + A+NRR ++ +
Sbjct: 213 MASVGYGEYQPVASNDTAEGRARNRRVVLVIS 244
>gi|323720608|gb|EGB29686.1| outer membrane protein A ompA [Mycobacterium tuberculosis CDC1551A]
Length = 291
Score = 80.6 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 1/140 (0%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
M ++ I+ P + LQ ++ G + F S+ PAD ++L+ +
Sbjct: 151 MKIVNNIEVTGQAPPGPPASGPCADLQSAINAVTGGPIAFGNDGASLIPADYEILNRVAD 210
Query: 75 WLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
L+ I G+ D GS +I L +RA V +Y VARG++ + G P
Sbjct: 211 KLKACPDARVTINGYTDNTGSEGINIPLSAQRAKIVADYLVARGVAGDHIATVGLGSVNP 270
Query: 134 SVYGHDEDAYAKNRRAIVFL 153
+ AKNRR + +
Sbjct: 271 IASNATPEGRAKNRRVEIVV 290
>gi|297618036|ref|YP_003703195.1| OmpA/MotB domain protein [Syntrophothermus lipocalidus DSM 12680]
gi|297145873|gb|ADI02630.1| OmpA/MotB domain protein [Syntrophothermus lipocalidus DSM 12680]
Length = 258
Score = 80.6 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 48/126 (38%), Gaps = 5/126 (3%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD----ELGS 94
+ S+ D++ F S + P +++ +G L+ +EGH D
Sbjct: 124 EQERGLVISLKDTLLFPKGSDVLTPRAHEIIRKVGESLKTIPNYVRVEGHTDDLPINTPK 183
Query: 95 RNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L + RA V + I R+ T YG+ P + E A NRR + +
Sbjct: 184 FPSNWELSVLRATNVVHVLAGEVGIPPDRLSATGYGEYRPLMPNDSEPNRAMNRRVDIVI 243
Query: 154 KGCRAN 159
+ +
Sbjct: 244 LKQKYD 249
>gi|254420406|ref|ZP_05034130.1| OmpA family protein [Brevundimonas sp. BAL3]
gi|196186583|gb|EDX81559.1| OmpA family protein [Brevundimonas sp. BAL3]
Length = 183
Score = 80.6 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 2/113 (1%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--LIEGHADELGSRNSSIA 100
DSV F T + ++ P Q L+ L + + I+G+ D G +
Sbjct: 69 YQVVLSDDSVKFPTDASALSPEAEQRLAQFAQRLRDENKNVYLEIQGYTDATGPVEHNNQ 128
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
LG +RA AV + +G++ +RM SYG E P + ++NRR + +
Sbjct: 129 LGEQRAEAVRRFLNRQGVALNRMSTISYGPEEPVASNDTPEGRSQNRRVTIVV 181
>gi|332143465|ref|YP_004429203.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Alteromonas macleodii str. 'Deep
ecotype']
gi|327553487|gb|AEB00206.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Alteromonas macleodii str. 'Deep
ecotype']
Length = 213
Score = 80.6 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 2/131 (1%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF-LIEGHAD 90
DT + + + + F T S SI P VL ++ + ++ +I+GH D
Sbjct: 83 DTGVQVVREGDNLRLIMPGDITFATDSASISPNFNPVLQDVAKVVNNYEKTVLMIKGHTD 142
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
+ GS + +L RRA AV N + ++ +R+ G+ P V + + NRR
Sbjct: 143 DTGSEQYNQSLSERRAGAVKNLLINYSVNPTRITTVGMGEYSPKVPNNSAANRSMNRRVE 202
Query: 151 VFLKG-CRANT 160
+ ++ ++NT
Sbjct: 203 MEIQPLTQSNT 213
>gi|74317269|ref|YP_315009.1| flagellar motor protein MotD [Thiobacillus denitrificans ATCC
25259]
gi|74056764|gb|AAZ97204.1| outer membrane chemotaxis MotB protein [Thiobacillus denitrificans
ATCC 25259]
Length = 263
Score = 80.6 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 47/133 (35%), Gaps = 4/133 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD- 90
+ + + + S + +V F+ + P + VL + + L + I GH D
Sbjct: 121 EGKVRVTQSRRGVSIEINANVLFEPGRAELAPESLAVLRAVAAQLRHEPFNIEITGHTDI 180
Query: 91 ---ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
S+ L RA +V GI+ SR+ P + A+NR
Sbjct: 181 VPISNSVFASNWELSAVRATSVVRLLADGGIAPSRLFAIGREASQPIASNGTAEGRARNR 240
Query: 148 RAIVFLKGCRANT 160
R + + +T
Sbjct: 241 RVELMILSAMPDT 253
>gi|331006366|ref|ZP_08329676.1| Flagellar motor rotation protein MotB [gamma proteobacterium
IMCC1989]
gi|330419826|gb|EGG94182.1| Flagellar motor rotation protein MotB [gamma proteobacterium
IMCC1989]
Length = 321
Score = 80.6 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 52/126 (41%), Gaps = 4/126 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ + SS + S+ + + FD + +V++ + + ++ +EG D
Sbjct: 96 EGAIEVSSNELWLQISLSNRILFDIGNVKPSEQANEVIAQIATIMKDTVNPIRVEGFTDN 155
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
L S+ L RA A+ A G+S S++ YG+ P E AKNR
Sbjct: 156 LAINTAQFPSNWQLSAARASAIVQLLSASGVSPSQLSAVGYGEFQPIADNSSEAGRAKNR 215
Query: 148 RAIVFL 153
R ++ +
Sbjct: 216 RVVLMI 221
>gi|304309686|ref|YP_003809284.1| outer membrane porin f precursor [gamma proteobacterium HdN1]
gi|301795419|emb|CBL43617.1| outer membrane porin f precursor [gamma proteobacterium HdN1]
Length = 353
Score = 80.6 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 50/137 (36%), Gaps = 2/137 (1%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
D + N L + S+ +V F T S ++ P + + +++K+
Sbjct: 210 SADRCPNTRAGAKVDANGCELVKTVMESIRLNVQFATGSSAVAPRYHAEVQKIADFMKKY 269
Query: 80 D-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYG 137
IEGH D G + L RA +V V R A +R+ YG P
Sbjct: 270 PDLTVTIEGHTDNTGGAALNERLSSARANSVREELVNRFGVAANRVTSVGYGPSRPVASN 329
Query: 138 HDEDAYAKNRRAIVFLK 154
+NRR + L+
Sbjct: 330 ATAAGRQENRRVVAVLE 346
>gi|298369093|ref|ZP_06980411.1| OmpA family protein [Neisseria sp. oral taxon 014 str. F0314]
gi|298283096|gb|EFI24583.1| OmpA family protein [Neisseria sp. oral taxon 014 str. F0314]
Length = 417
Score = 80.6 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 52/130 (40%), Gaps = 5/130 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
++ ++ + ++ F++ S SI+ VL+ +G L D ++ G+ D
Sbjct: 266 VSVKDDPDRSTVTILGDGLFESGSTSIQDQYYPVLAAVGQALNSVDGQVVVTGYTDNTPI 325
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
S+ L RA AV ++ + A+R++ G P + AKNRR
Sbjct: 326 QSLEYPSNWHLSQGRADAVKEILLSYMRNGANRIRSEGRGSTNPVAPNDSPENKAKNRRV 385
Query: 150 IVFLKGCRAN 159
+ L N
Sbjct: 386 EITLFATDTN 395
>gi|239818113|ref|YP_002947023.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
gi|239804690|gb|ACS21757.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
Length = 187
Score = 80.6 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 55/137 (40%), Gaps = 1/137 (0%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
++ + + V+ E + Q V + + FD +++ QVL + L
Sbjct: 47 LAALKTELESSTKGTGVVIEQTADNQLHLVVPNELSFDVGRANVKRNLAQVLDKVAEGLR 106
Query: 78 KHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ GH D GS + L + RA +V N+ V+RG+S + + G P
Sbjct: 107 SAAAASVRVVGHTDNTGSEEGNERLSVSRADSVRNHLVSRGVSTTAITTDGRGSREPIAD 166
Query: 137 GHDEDAYAKNRRAIVFL 153
A+NRR +F+
Sbjct: 167 NATPAGRAQNRRVEIFV 183
>gi|330446544|ref|ZP_08310196.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328490735|dbj|GAA04693.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 325
Score = 80.6 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 2/109 (1%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLR 104
+ +V F S +I D L+ L+ + GH D GS + L +
Sbjct: 202 EELKLTVPFAFDSSTITAGDAAKLAPFEQRLKDQGAAQIYVIGHTDSRGSEAYNQKLSEK 261
Query: 105 RAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
RA AV + + +R+ G+ P E+ A+NRR +
Sbjct: 262 RAQAVADALRQHLNVGETRIIAQGRGESDPVASNQTEEGRAQNRRVDII 310
>gi|260599847|ref|YP_003212418.1| putative outer membrane lipoprotein [Cronobacter turicensis z3032]
gi|260219024|emb|CBA34379.1| Inner membrane lipoprotein yiaD [Cronobacter turicensis z3032]
Length = 220
Score = 80.6 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 65/135 (48%), Gaps = 1/135 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
+ + T ++ + + ++ ++V FD+S +++PA L+ + L+++
Sbjct: 83 VQEAKLRQKMQGTGVSVTRSGDNIILNMPNNVTFDSSQANLKPAGANTLTGVAMVLKEYP 142
Query: 81 CD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ G+ D G + ++ L +RA +V + + +G++A+R++ + G P
Sbjct: 143 KTAVNVVGYTDSTGGQALNMKLSQQRAESVASALITQGVAANRIRTSGMGPANPVASNST 202
Query: 140 EDAYAKNRRAIVFLK 154
E+ A+NRR + L
Sbjct: 203 EEGKAQNRRVEITLS 217
>gi|226946149|ref|YP_002801222.1| OmpA family protein [Azotobacter vinelandii DJ]
gi|226721076|gb|ACO80247.1| OmpA family protein [Azotobacter vinelandii DJ]
Length = 222
Score = 80.6 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 1/125 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHA 89
T + + ++ F T S I L++L + +++ + GH
Sbjct: 87 AGTGVEVQRQGNDIKLIMPGNITFATGSAEIASNFYTPLNDLANSFKQYDQNSIEVIGHT 146
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GS ++++L RRA +V NY VA+G++ +R+ G + P E ++NRR
Sbjct: 147 DSTGSYQTNMSLSQRRAQSVANYLVAQGVNGARVTTRGAGPDSPVASNATESGRSQNRRV 206
Query: 150 IVFLK 154
+ L+
Sbjct: 207 EINLR 211
>gi|116049050|ref|YP_792148.1| hypothetical protein PA14_49900 [Pseudomonas aeruginosa UCBPP-PA14]
gi|115584271|gb|ABJ10286.1| probable outer membrane protein precursor [Pseudomonas aeruginosa
UCBPP-PA14]
Length = 168
Score = 80.6 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 31/157 (19%), Positives = 58/157 (36%), Gaps = 8/157 (5%)
Query: 5 TIFIILSAITM-MSISGIDNLDTKI---SSPDTVLNESS---LQEQFSSSVGDSVFFDTS 57
+ + L+ ++ + ++G + + VL E E + + V F +
Sbjct: 9 SRLLALALFSLVLGLAGCQTKPPQTGLSAEQIAVLQEQGFELRDEGWEFGMSSKVLFGNN 68
Query: 58 SYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
+ P L+ + L D +EGH D G + L RRA +V F
Sbjct: 69 LDRLNPDSRNTLTKIAHALLAVDIDKVRLEGHTDNYGDEGYNQKLSERRAESVAAVFREA 128
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G+ A+ ++V G P ++NRR + +
Sbjct: 129 GMPAANIEVRGLGMSKPVADNKTRAGRSENRRVAIIV 165
>gi|26991025|ref|NP_746450.1| flagellar motor protein MotD [Pseudomonas putida KT2440]
gi|24986055|gb|AAN69914.1|AE016630_5 flagellar motor protein MotB [Pseudomonas putida KT2440]
Length = 285
Score = 80.6 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 13/152 (8%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQF---------SSSVGDSVFFDTSSYSIRPADI 66
++ + +D L T + +Q + S+ F +
Sbjct: 93 LAATNVDPLKTISDDVRDAFGDLINSDQMTVRGNELWIEIELNSSLLFGSGDAMPSDKAF 152
Query: 67 QVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASR 122
++ + S L+ +EG D L ++ L RA ++ G++ +R
Sbjct: 153 AIIEKVASILKPFANPVHVEGFTDNLPIRTAQYPTNWELSSARAASIVRLLAMEGVNPAR 212
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
M YG+ P + A+NRR ++ +
Sbjct: 213 MASVGYGEYQPVASNDTAEGRARNRRVVLVIS 244
>gi|114330317|ref|YP_746539.1| OmpA/MotB domain-containing protein [Nitrosomonas eutropha C91]
gi|114307331|gb|ABI58574.1| OmpA/MotB domain protein [Nitrosomonas eutropha C91]
Length = 173
Score = 80.6 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 46/175 (26%), Positives = 78/175 (44%), Gaps = 22/175 (12%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG----------- 49
M+ F+ + AI+++S DN D + E S G
Sbjct: 1 MKK---FLAVLAISLLSACASDNAQQTSDIEDHSYSRGGESEGMRSGTGSDRFGMNPLQD 57
Query: 50 -------DSVFFDTSSYSIRPADIQ-VLSNLGSWLEKHDCDFLIEGHADELGSRNSSIAL 101
SV+FD SY+++ VL++ + + L++G+ DE GSR ++AL
Sbjct: 58 PNNILSRRSVYFDFDSYTVKGEYRDLVLAHAAYLRDNLNAQVLLQGNTDERGSREYNLAL 117
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
G RRA +V + + G +++ S G+E P G DE ++A+NRR + +G
Sbjct: 118 GQRRANSVKDILLLSGARDQQVEAVSLGEEKPRALGSDESSWAENRRTDILYQGE 172
>gi|239814628|ref|YP_002943538.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
gi|239801205|gb|ACS18272.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
Length = 217
Score = 80.6 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Query: 58 SYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
++P L++L S + + + +I GH D +GS + L +RRA AV + V++
Sbjct: 114 KSVLKPEGRAKLTDLVSKIRDVNLEVIIAVGHTDSIGSDAYNQRLSVRRAEAVKAFLVSK 173
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
GI +R+ G++ P ++ AKNRR + + G RA
Sbjct: 174 GIERNRVYTEGKGEKQPVADNRTKEGRAKNRRVEIEVVGTRA 215
>gi|289523562|ref|ZP_06440416.1| flagellar motor protein MotB [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503254|gb|EFD24418.1| flagellar motor protein MotB [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 239
Score = 80.6 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 47/125 (37%), Gaps = 4/125 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ + S+ D + F + S + P +++ + + +EGH D +
Sbjct: 109 NEVTVRIEERGIVISIIDGLLFQSGSVELIPPARRLIYKIAQIINDLPNQISVEGHTDNV 168
Query: 93 G----SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
+ L RA V +Y V GI R++ YG+ P V E+ NRR
Sbjct: 169 PLNRGPYRDNWGLSAMRAAVVGSYLVEAGIDPKRLRTVGYGQSRPLVPNDTEEHRRINRR 228
Query: 149 AIVFL 153
+ +
Sbjct: 229 VDIVI 233
>gi|242278087|ref|YP_002990216.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
gi|242120981|gb|ACS78677.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
Length = 356
Score = 80.6 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
V + F Y I + L+ + E + L+ GH D GS + L RRA
Sbjct: 248 VFRNFNFGFDKYQITDEMVPALTEAATMLEEFPNLKVLVGGHTDSSGSEAYNQGLSERRA 307
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+V ++ A GI+ R++V YG+ P ++ NRR + ++
Sbjct: 308 KSVADWLAANGIAPKRLEVKGYGEMNPKYDNKTKEGRKLNRRVEIDVE 355
>gi|156977475|ref|YP_001448381.1| hypothetical protein VIBHAR_06262 [Vibrio harveyi ATCC BAA-1116]
gi|156529069|gb|ABU74154.1| hypothetical protein VIBHAR_06262 [Vibrio harveyi ATCC BAA-1116]
Length = 334
Score = 80.6 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Query: 54 FDTSSYSIRPADIQVL-SNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F+ S + + + L + + E I G+ D G ++ L RRA AV +Y
Sbjct: 222 FEFDSAKLTDSVSERLDNFVNFLNEYPQAQVEITGYTDSSGPAAYNLKLSERRAQAVADY 281
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+A GI A R VT G+E P + +NRR +V +
Sbjct: 282 LIAAGIDADRFTVTGMGEEDPVADNSTHEGREQNRRVVVHV 322
>gi|149919600|ref|ZP_01908079.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
gi|149819543|gb|EDM78971.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
Length = 458
Score = 80.6 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 44/127 (34%), Gaps = 1/127 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGH 88
D +E + S + V F+T +I I L D I GH
Sbjct: 321 DDDGCPDEVPEELTSLSGIMQGVNFETDKDTITKDSIPQLEQAAEVLNRFPDLRVEISGH 380
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D G ++ L RRA AV + V G+ SR++ G + P NRR
Sbjct: 381 TDSRGGYQHNMDLSRRRAEAVKKWLVDNGVDGSRLETRGAGPDEPIDTNDTSAGRFNNRR 440
Query: 149 AIVFLKG 155
+ G
Sbjct: 441 IEFTILG 447
>gi|254230148|ref|ZP_04923543.1| outer membrane protein OmpA [Vibrio sp. Ex25]
gi|262394952|ref|YP_003286806.1| outer membrane protein A [Vibrio sp. Ex25]
gi|151937341|gb|EDN56204.1| outer membrane protein OmpA [Vibrio sp. Ex25]
gi|262338546|gb|ACY52341.1| outer membrane protein A precursor [Vibrio sp. Ex25]
Length = 320
Score = 80.6 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Query: 54 FDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FD +S +++P L N + E + + G+ D G ++ + +RA +V N
Sbjct: 211 FDLNSTTLKPESAAKLDNLVAFLNEHPQANVEVVGYTDTSGPAAYNLKVSEKRAESVANA 270
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V +GI +SR++ G+ P + +NRR + +
Sbjct: 271 LVEKGIDSSRIQARGEGENNPIASNDTREGRQQNRRVEIVV 311
>gi|57505318|ref|ZP_00371247.1| omp18 [Campylobacter upsaliensis RM3195]
gi|315639283|ref|ZP_07894445.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter
upsaliensis JV21]
gi|57016454|gb|EAL53239.1| omp18 [Campylobacter upsaliensis RM3195]
gi|315480609|gb|EFU71251.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter
upsaliensis JV21]
Length = 165
Score = 80.6 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 12/163 (7%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQ-------EQFSSSVGDS---V 52
I A + ISG T +S V + S + D+ V
Sbjct: 1 MKKILFTSIAAFAIVISGCSTKSTSVSGGTDVDGSRGSGGSDGWDIDSKISQLNDTLGKV 60
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNSSIALGLRRAYAVF 110
+FD ++IR V+S + +EG+ DE G+ + ALGL+RA AV
Sbjct: 61 YFDFDKFNIRSDMQSVVSTNANIFNTEVSGTSITVEGNCDEWGTDEYNQALGLKRAKAVK 120
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +++G+++ R+ V SYG+ P + A+NRRA L
Sbjct: 121 DALISQGVNSDRISVKSYGETNPVCTEKTKTCDAQNRRAEFKL 163
>gi|254506184|ref|ZP_05118328.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus 16]
gi|219551002|gb|EED27983.1| peptidoglycan-associated lipoprotein [Vibrio parahaemolyticus 16]
Length = 175
Score = 80.6 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 18/168 (10%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISSPDTVLNES-----------------SLQEQFS 45
+ I L + + + S D+ S +T ++ ++ +
Sbjct: 7 LKGLLIALPVLAVTACSSSDDAANASGSTETNQAQTTDGTVVSPIDQNGLLTEQELKEQA 66
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLR 104
+++F + +I ++L+ + + +EGHADE G+ +IALG R
Sbjct: 67 LRETQTIYFAFDNATIAGDYEEMLAAHAAYLSKNPALKVTVEGHADERGTPEYNIALGER 126
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
RA AV Y A G+ A ++ + SYG+E P + G ED YAKNRRA++
Sbjct: 127 RATAVAKYLQALGVQADQISIVSYGEEKPLLLGQSEDVYAKNRRAVLV 174
>gi|326403344|ref|YP_004283425.1| hypothetical protein ACMV_11960 [Acidiphilium multivorum AIU301]
gi|325050205|dbj|BAJ80543.1| hypothetical protein ACMV_11960 [Acidiphilium multivorum AIU301]
Length = 215
Score = 80.6 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 49/135 (36%), Gaps = 1/135 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
+ + V + + +V F T S ++ P +L LG +
Sbjct: 73 AQKQALQRTAQGTGVQVSQTADNRLKLNVPADAGFATGSATLNPRLYPILDQLGQGLQQN 132
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
I G+ D GS + L RA +V Y V+RGIS R+ G + P
Sbjct: 133 PTETVQIIGYTDSTGSNAINYPLSDNRAASVKTYLVSRGISGQRIATRGMGPQDPVASNA 192
Query: 139 DEDAYAKNRRAIVFL 153
A NRR +++
Sbjct: 193 TAAGRAANRRVDIYV 207
>gi|297529303|ref|YP_003670578.1| OmpA/MotB domain protein [Geobacillus sp. C56-T3]
gi|297252555|gb|ADI26001.1| OmpA/MotB domain protein [Geobacillus sp. C56-T3]
Length = 268
Score = 80.6 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 43/125 (34%), Gaps = 6/125 (4%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELG 93
L S E + ++ D + FD+ S +R D ++ + + + + +I GH D +
Sbjct: 130 LQTSLTDEGLAITILDDILFDSGSAEVRMKDRRLAAEISALLVMNPPRNIMISGHTDNVP 189
Query: 94 SRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
N A R + + + YG+ P KNRR
Sbjct: 190 IHNEKFASNWELSVMRAVNFMKVLLENKQLDPRYFSAKGYGEYKPIASNATAAGRMKNRR 249
Query: 149 AIVFL 153
+ +
Sbjct: 250 VEILI 254
>gi|70733365|ref|YP_263140.1| hypothetical protein PFL_6082 [Pseudomonas fluorescens Pf-5]
gi|68347664|gb|AAY95270.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
Length = 441
Score = 80.6 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 40/123 (32%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+ ++ ++ F ++S SI ++ + + K I GH+D
Sbjct: 313 VAVEDAVDRSVVTIRGDELFASASASILDDYQPLMLRIADAVRKVKGQVRITGHSDNRPI 372
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
S+ L RA +V A+ R P + A+NRR
Sbjct: 373 ATLRFPSNWKLSQARAESVLQILAAKTGQPERFSAEGRSDTEPLATNATAEGRARNRRVE 432
Query: 151 VFL 153
+ +
Sbjct: 433 ISV 435
>gi|70732413|ref|YP_262169.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
gi|68346712|gb|AAY94318.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
Length = 252
Score = 80.6 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 1/137 (0%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LE 77
+ + S +T + +Q + ++ F T S +I P+ Q L+NL + E
Sbjct: 87 ADQQEKKLRASMANTGVEVQRQGDQIKLIMPGNITFATDSANIAPSFYQPLNNLANSLRE 146
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+ I G+ D GSR ++ L RRA +V Y ++G+S S + G + P
Sbjct: 147 FNQNQIEIVGYTDSTGSRQHNMDLSQRRAQSVATYLTSQGVSGSNLSARGAGPDNPIASN 206
Query: 138 HDEDAYAKNRRAIVFLK 154
D + A+NRR V LK
Sbjct: 207 ADVNGRAQNRRVEVNLK 223
>gi|326334458|ref|ZP_08200670.1| OmpA family protein [Capnocytophaga sp. oral taxon 338 str. F0234]
gi|325693425|gb|EGD35352.1| OmpA family protein [Capnocytophaga sp. oral taxon 338 str. F0234]
Length = 455
Score = 80.6 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 6/136 (4%)
Query: 22 DNLDTKISSPDTVLNE-----SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW- 75
D D + + N+ + ++ + ++ FDT +I+ VL+ + S
Sbjct: 316 DKDDLCPNEAGSASNKGCPEPNDDDQKRLNQYAKTILFDTGKATIKFQSADVLNQIISVL 375
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+ + F IEGH D G + + L RA AV Y + GI A+R++ YG++ P
Sbjct: 376 NKFPNSRFRIEGHTDSTGKKAKNQVLSQNRADAVKVYLIQGGIDANRLESVGYGQDKPIA 435
Query: 136 YGHDEDAYAKNRRAIV 151
+ NRR +
Sbjct: 436 SNKTKKGRELNRRVEI 451
>gi|319778078|ref|YP_004134508.1| ompa/motb domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317171797|gb|ADV15334.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 369
Score = 80.6 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 2/138 (1%)
Query: 16 MSISGIDNLDTKISSPDTV-LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
++ S D + T +E L S +++F T+S + +L+ +
Sbjct: 225 VAASTADVGPVTTDAAKTSFSDEECLNRFAVLSRTGAIYFRTASARLDSQSRPLLAEVVG 284
Query: 75 WL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
+ + + GH D GS + L RRA AV + VA GI +++ T YG+E P
Sbjct: 285 VVGKCPGLKVEVSGHTDSDGSPIENKRLSERRAQAVADAIVAAGIPRTQIAATGYGEERP 344
Query: 134 SVYGHDEDAYAKNRRAIV 151
A NRR
Sbjct: 345 VADNDTPKNKALNRRIEF 362
>gi|262278151|ref|ZP_06055936.1| peptidoglycan-associated lipoprotein [Acinetobacter calcoaceticus
RUH2202]
gi|262258502|gb|EEY77235.1| peptidoglycan-associated lipoprotein [Acinetobacter calcoaceticus
RUH2202]
Length = 190
Score = 80.6 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 71/166 (42%), Gaps = 17/166 (10%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESS----------------LQEQFSS 46
+ ++ ++++ + T S+ +T + ++
Sbjct: 15 FLSVALVMTGCASRKPAATTATGTNPSTVNTSGLSEDAALNAQNLAGASSKGVTEANKAA 74
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRR 105
V FD S + D Q L + + + + GH DE G+R ++ALG RR
Sbjct: 75 LAKRVVHFDYDSSDLSTEDYQTLQAHAQFLMANANSKVALTGHTDERGTREYNMALGERR 134
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
A AV +Y + G++ +++ SYGKE P GHDE A+ +NRR +
Sbjct: 135 AKAVQSYLITNGVNPQQLEAVSYGKEAPVNAGHDESAWKENRRVEI 180
>gi|239993109|ref|ZP_04713633.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Alteromonas macleodii ATCC 27126]
Length = 213
Score = 80.6 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 2/131 (1%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF-LIEGHAD 90
DT + + + + F T S SI P VL ++ + ++ +I+GH D
Sbjct: 83 DTGVQVVREGDNLRLIMPGDITFATDSSSISPNFNPVLQDVAKVVNNYEKTVLMIKGHTD 142
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
+ GS + +L RRA AV N + ++ +R+ G+ P V + + NRR
Sbjct: 143 DTGSEQYNQSLSERRAGAVKNLLINYSVNPTRITTVGMGEYAPKVPNNSAANRSMNRRVE 202
Query: 151 VFLKG-CRANT 160
+ ++ ++NT
Sbjct: 203 MEIQPLTQSNT 213
>gi|222035267|emb|CAP78012.1| Inner membrane lipoprotein yiad [Escherichia coli LF82]
gi|312948118|gb|ADR28945.1| putative outer membrane lipoprotein [Escherichia coli O83:H1 str.
NRG 857C]
gi|320193935|gb|EFW68568.1| Outer membrane protein A precursor [Escherichia coli WV_060327]
Length = 219
Score = 80.6 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD+SS +++PA L+ + L+++ + G+ D
Sbjct: 94 GTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + ++ L +RA +V + + +G+ ASR++ G P + A+NRR
Sbjct: 154 STGSHDLNMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTSEGKAQNRRVE 213
Query: 151 VFLK 154
+ L
Sbjct: 214 ITLS 217
>gi|104780439|ref|YP_606937.1| OmpA family outer membrane protein [Pseudomonas entomophila L48]
gi|95109426|emb|CAK14127.1| putative outer memebrane protein, OmpA family [Pseudomonas
entomophila L48]
Length = 239
Score = 80.6 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 50/117 (42%), Gaps = 1/117 (0%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRN 96
+++ E + V F +S + + L NL L + GH D +GS +
Sbjct: 122 AAISEVITLDDQGQVLFAFNSDRLEAGAQERLHNLLPKLNDPSVLSIKVIGHTDSVGSDS 181
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RRA +V Y +++G++ ++ G+ P E+ A NRR + L
Sbjct: 182 YNQGLSERRASSVAEYLISQGLAPEKVTSQGRGESEPVADNDTEEGRAHNRRVELHL 238
>gi|84501356|ref|ZP_00999561.1| hypothetical protein OB2597_13363 [Oceanicola batsensis HTCC2597]
gi|84390647|gb|EAQ03135.1| hypothetical protein OB2597_13363 [Oceanicola batsensis HTCC2597]
Length = 350
Score = 80.6 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 1/118 (0%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSR 95
E+ + S +++F S + A +L ++ + + + GH D +GS
Sbjct: 231 EACVGRFEILSRTGNIYFRPGSSRLDDASAPLLDSIYDIISRCPGLRIAVAGHTDSIGSA 290
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ +L RRA +V +Y A+G+ RM YG+ P + ++NRR +
Sbjct: 291 ASNQSLSERRASSVVDYLAAKGLGQGRMIAVGYGEARPVADNGTDAGRSRNRRIEFSV 348
>gi|114778393|ref|ZP_01453240.1| flagellar motor protein [Mariprofundus ferrooxydans PV-1]
gi|114551356|gb|EAU53913.1| flagellar motor protein [Mariprofundus ferrooxydans PV-1]
Length = 251
Score = 80.6 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 45/130 (34%), Gaps = 4/130 (3%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGH 88
+S V++ Q + ++ F + + L NL L+ + + GH
Sbjct: 113 NSLGGVMDVKMSPGQIRLQMDAALLFKPGQSELDESSRIPLKNLAKVLQTYTGKIEVAGH 172
Query: 89 ADELG----SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+D S+ L RA AV + GI R+ Y P + A
Sbjct: 173 SDSTPLAGRGYQSNWELSTMRATAVVKALIDFGIEPGRLHAAGYADTRPLASNATAEGRA 232
Query: 145 KNRRAIVFLK 154
KNRR ++
Sbjct: 233 KNRRVEFTIE 242
>gi|28868377|ref|NP_790996.1| ompA family protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213967171|ref|ZP_03395320.1| ompA family protein [Pseudomonas syringae pv. tomato T1]
gi|301381094|ref|ZP_07229512.1| ompA family protein [Pseudomonas syringae pv. tomato Max13]
gi|302062421|ref|ZP_07253962.1| ompA family protein [Pseudomonas syringae pv. tomato K40]
gi|302133214|ref|ZP_07259204.1| ompA family protein [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|28851615|gb|AAO54691.1| ompA family protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213928013|gb|EEB61559.1| ompA family protein [Pseudomonas syringae pv. tomato T1]
gi|330965011|gb|EGH65271.1| ompA family protein [Pseudomonas syringae pv. actinidiae str.
M302091]
gi|331018068|gb|EGH98124.1| ompA family protein [Pseudomonas syringae pv. lachrymans str.
M302278PT]
Length = 229
Score = 80.6 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIE 86
S +T + +Q + ++ F T S +I + L+NL + + + + I
Sbjct: 95 ASMANTGVEVQRQGDQIKLIMPGNITFATDSSAIASSFYSPLNNLANSLKQFNQNNIEII 154
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
G+ D GSR ++ L +RA +V Y ++G+ S + V G + P D + A+N
Sbjct: 155 GYTDSTGSRQHNMDLSQQRAQSVATYLTSQGVDQSHLSVRGAGPDQPIASNADANGRAQN 214
Query: 147 RRAIVFLK 154
RR V LK
Sbjct: 215 RRVEVNLK 222
>gi|115350730|ref|YP_772569.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD]
gi|115280718|gb|ABI86235.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
Length = 169
Score = 80.6 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 43/166 (25%), Positives = 77/166 (46%), Gaps = 14/166 (8%)
Query: 1 MQYSTIFIILSAITMMSISGIDN-------------LDTKISSPDTVLNESSLQEQFSSS 47
M + + L+ + + +++ + + +N L + S
Sbjct: 1 MMSNKARLALAVMMISALAACKSGVKLDDKTNAGAVSTQPSADNVAQVNVDPLNDPNSPL 60
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRA 106
S++FD SYS++ ++ +L+ H LI+G+ DE G+ ++ALG +RA
Sbjct: 61 AKRSIYFDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNTDERGTSEYNLALGQKRA 120
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
AV G++ S+M+ S GKE P GHDE ++A+NRRA +
Sbjct: 121 EAVRRAMALLGVNDSQMEAVSLGKEKPQASGHDEASWAQNRRADLV 166
>gi|313677015|ref|YP_004055011.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
gi|312943713|gb|ADR22903.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
Length = 670
Score = 80.6 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
V ++FFDT S +R + L + D I GH D +G+ + L +RA
Sbjct: 556 VLKNIFFDTGSSDLRTESLGELKVIKDLLTNSPDLRVQINGHTDNVGNSVYNKLLSKKRA 615
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED-AYAKNRRAIVFLKGCRAN 159
+V +Y +A GI++ R++ +G+E P V DE NRR + + G N
Sbjct: 616 QSVVDYLIANGINSERLEAKGFGEEKPLVSNDDEIGGREINRRTEIEILGQSQN 669
>gi|308062402|gb|ADO04290.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
Cuz20]
Length = 179
Score = 80.6 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 36/177 (20%), Positives = 70/177 (39%), Gaps = 24/177 (13%)
Query: 1 MQYSTIFIILSAITMMSIS----------------GIDNLDTKISSPDTVLNESSLQEQF 44
M+ S++F L+A ++ + + +
Sbjct: 1 MKRSSVFSFLAAFLFIAGCKHNMDKETVAGDVSAKTVQSAPVSTEKQEPKEEPKQEPAPV 60
Query: 45 SS--------SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRN 96
++ S++FD Y I+ +D + L + +++ L+EG+ DE GS
Sbjct: 61 VEEKPAIESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEFGSSE 120
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ ALG++R +V N + +G+ +K S+G+ P + Y +NRR V L
Sbjct: 121 YNQALGVKRTLSVKNALIIKGVEKDMIKTISFGETKPKCTQKTRECYRENRRVDVKL 177
>gi|300779346|ref|ZP_07089204.1| proteobacterial sortase system OmpA family protein
[Chryseobacterium gleum ATCC 35910]
gi|300504856|gb|EFK35996.1| proteobacterial sortase system OmpA family protein
[Chryseobacterium gleum ATCC 35910]
Length = 229
Score = 80.6 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 52/134 (38%), Gaps = 2/134 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGD-SVFFDTSSYSIRPADIQVLSNLGSW-LEKH 79
D I + + ++ + V F S ++ L L
Sbjct: 82 DKQARDIKETLPGAQVERVGDGIKVTMNESIVNFAFDSSNLTSVAQTNLDKLAEVLANNP 141
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
D + I GH D GS + ++ L RRA AV Y +GI++SRM G+ MP
Sbjct: 142 DTNINIYGHTDSKGSDDYNLKLSQRRADAVKAYLTGKGIASSRMFTKGEGEAMPVASNDT 201
Query: 140 EDAYAKNRRAIVFL 153
E+ AKNRR +
Sbjct: 202 EEGRAKNRRVEFAI 215
>gi|163758789|ref|ZP_02165876.1| probable peptidoglycan-associated lipoprotein precursor [Hoeflea
phototrophica DFL-43]
gi|162284079|gb|EDQ34363.1| probable peptidoglycan-associated lipoprotein precursor [Hoeflea
phototrophica DFL-43]
Length = 167
Score = 80.6 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 48/141 (34%), Positives = 72/141 (51%), Gaps = 2/141 (1%)
Query: 18 ISGIDNLDTKISSPDTVLNESS-LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW- 75
+ L + N + Q+ F+ +VGD +FFDT S IRP L W
Sbjct: 25 CASKKTLPNNAADLGLAGNATPGSQQDFTVNVGDRIFFDTDSSVIRPDAASTLDRQAQWL 84
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+ +EGHADE G+R ++ALG RRA A Y +RG++A+R++ S+GKE P
Sbjct: 85 NQYPTYRITMEGHADERGTREYNLALGARRAAAAKQYLTSRGVAANRIQTISFGKERPVA 144
Query: 136 YGHDEDAYAKNRRAIVFLKGC 156
D +++NRR++ L G
Sbjct: 145 VCDDISCWSQNRRSVTVLGGA 165
>gi|71281842|ref|YP_271675.1| ompA family protein [Colwellia psychrerythraea 34H]
gi|71147582|gb|AAZ28055.1| ompA family protein [Colwellia psychrerythraea 34H]
Length = 222
Score = 80.6 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
D+ ++ ++ + + ++ F TSS +I VL+++ LE+++ ++ GH D
Sbjct: 94 DSGVSIQREGDKINLIMPGNITFATSSSNINTNFTGVLNSVALVLEEYNKTLVVVSGHTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + L RA +V NY + I + R++V +G+ P NRR
Sbjct: 154 SSGSAQYNQKLSEERAGSVANYLRGQKILSERLEVVGFGEAQPVADNQSAGGRELNRRVE 213
Query: 151 VFL 153
+ L
Sbjct: 214 ITL 216
>gi|110638113|ref|YP_678322.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
gi|110280794|gb|ABG58980.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
Length = 631
Score = 80.6 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYA 108
+++FF T+SY + I L L ++++ + + G+ D +G+ +++ L RA A
Sbjct: 526 NNIFFQTNSYQLEEKSISELKKLINFIQINPAQRVELAGYTDNVGTAEANLKLSAMRAKA 585
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V++Y + GI + + YG P + E+ KNRR + +
Sbjct: 586 VYDYLIQHGIKPAGITYKGYGAASPVADNNSEEGRQKNRRLEIKI 630
>gi|293412987|ref|ZP_06655655.1| conserved hypothetical protein [Escherichia coli B354]
gi|291468634|gb|EFF11127.1| conserved hypothetical protein [Escherichia coli B354]
Length = 219
Score = 80.6 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD+SS +++PA L+ + L+++ + G+ D
Sbjct: 94 GTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + ++ L +RA +V + + +G+ A R++ G P + A+NRR
Sbjct: 154 STGGHDLNMRLSQQRADSVASALITQGVDAGRIRTQGLGPANPIASNSTAEGKAQNRRVE 213
Query: 151 VFLK 154
+ L
Sbjct: 214 ITLS 217
>gi|254494341|ref|ZP_05107512.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
gi|226513381|gb|EEH62726.1| conserved hypothetical protein [Neisseria gonorrhoeae 1291]
Length = 216
Score = 80.6 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 36/124 (29%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHA 89
DT + Q + +SV F T S ++ + L+ ++ D I GH
Sbjct: 80 ADTQIEIQRQGNQIRLVMPESVTFATGSAALGGSAQYALNTAAQTLVQYPDTTLTINGHT 139
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GS + L RA AV Y RG++ASR+ V YG MP + A+NRR
Sbjct: 140 DNTGSDAVNNPLSQHRAQAVAYYLQTRGVAASRLTVYGYGSHMPVASNATVEGRAQNRRV 199
Query: 150 IVFL 153
+ +
Sbjct: 200 EILI 203
>gi|194099378|ref|YP_002002478.1| hypothetical protein NGK_1853 [Neisseria gonorrhoeae NCCP11945]
gi|239999626|ref|ZP_04719550.1| hypothetical protein Ngon3_09112 [Neisseria gonorrhoeae 35/02]
gi|240014801|ref|ZP_04721714.1| hypothetical protein NgonD_09194 [Neisseria gonorrhoeae DGI18]
gi|240017250|ref|ZP_04723790.1| hypothetical protein NgonFA_08817 [Neisseria gonorrhoeae FA6140]
gi|240081113|ref|ZP_04725656.1| hypothetical protein NgonF_07349 [Neisseria gonorrhoeae FA19]
gi|240113325|ref|ZP_04727815.1| hypothetical protein NgonM_07083 [Neisseria gonorrhoeae MS11]
gi|240116327|ref|ZP_04730389.1| hypothetical protein NgonPID1_08846 [Neisseria gonorrhoeae PID18]
gi|240118614|ref|ZP_04732676.1| hypothetical protein NgonPID_09178 [Neisseria gonorrhoeae PID1]
gi|240121324|ref|ZP_04734286.1| hypothetical protein NgonPI_06069 [Neisseria gonorrhoeae PID24-1]
gi|240124157|ref|ZP_04737113.1| hypothetical protein NgonP_09504 [Neisseria gonorrhoeae PID332]
gi|240126226|ref|ZP_04739112.1| hypothetical protein NgonSK_08443 [Neisseria gonorrhoeae SK-92-679]
gi|240128827|ref|ZP_04741488.1| hypothetical protein NgonS_09423 [Neisseria gonorrhoeae SK-93-1035]
gi|293398468|ref|ZP_06642646.1| hypothetical protein NGNG_01123 [Neisseria gonorrhoeae F62]
gi|193934668|gb|ACF30492.1| Conserved hypothetical protein [Neisseria gonorrhoeae NCCP11945]
gi|291610939|gb|EFF40036.1| hypothetical protein NGNG_01123 [Neisseria gonorrhoeae F62]
gi|317164880|gb|ADV08421.1| hypothetical protein NGTW08_1460 [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 225
Score = 80.6 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIA 100
Q + +SV F T S ++ + L+ ++ D I GH D GS +
Sbjct: 100 NQIRLVMPESVTFATGSAALGGSAQYALNTAAQTLVQYPDTTLTINGHTDNTGSDAVNNP 159
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA AV Y RG++ASR+ V YG MP + A+NRR + +
Sbjct: 160 LSQHRAQAVAYYLQTRGVAASRLTVYGYGSHMPVASNATVEGRAQNRRVEILI 212
>gi|4580969|gb|AAD24556.1|AF117964_1 OprF [Pseudomonas fuscovaginae]
Length = 326
Score = 80.6 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAV 109
V FD + ++P + NL +++++ ++ GH D +G+ + L RRA AV
Sbjct: 218 DVKFDFNKAVVKPNSYGDVKNLADFMKQYPQTTTVVSGHTDSVGTDAYNQKLSQRRADAV 277
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
V GI+ +R++ YGK P E A NRR ++
Sbjct: 278 KQVLVKDGIAPNRIQSVVYGKTRPVADNATEAGRAINRRVEASVE 322
>gi|294678711|ref|YP_003579326.1| OmpA/MotB domain-containing protein [Rhodobacter capsulatus SB
1003]
gi|294477531|gb|ADE86919.1| OmpA/MotB domain protein [Rhodobacter capsulatus SB 1003]
Length = 173
Score = 80.6 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 16/162 (9%)
Query: 9 ILSAITMMSISGIDNLDTKISSP---------------DTVLNESSLQEQFSSSVGDSVF 53
+ M++++ +N ++ +N+ + FS VGD+V
Sbjct: 7 AAFGLAMIALAACNNPSKNGANGVVDPGGAYGDAGGVSQGSINDPNSPAYFSGKVGDTVR 66
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F ++ LS WL H + +IEGHADE G+R ++ALG RRA +V Y
Sbjct: 67 FVVDQSTLTDEARATLSGQAQWLNSHGNYAAIIEGHADEQGTREYNLALGARRASSVQQY 126
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+++G+ A+R++ SYGKE P E +++NRRA+ +
Sbjct: 127 LISQGVPATRLRTVSYGKERPIATCASESCFSQNRRAVTVIS 168
>gi|260438796|ref|ZP_05792612.1| putative chemotaxis protein MotB [Butyrivibrio crossotus DSM 2876]
gi|292808785|gb|EFF67990.1| putative chemotaxis protein MotB [Butyrivibrio crossotus DSM 2876]
Length = 265
Score = 80.6 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 59/130 (45%), Gaps = 5/130 (3%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEG 87
+ Q ++ ++ F+++S ++ +VLS++ L+ ++ + IEG
Sbjct: 130 MGQSNNIEVQVTQHYVCLNMKGALLFNSASATLTSDAEKVLSDVAVILKMYEDNLIEIEG 189
Query: 88 HADELGSRNS----SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
H D + + L RA AVF++ V +GIS ++K + G+ P +
Sbjct: 190 HTDNVPINWDIFTSNNVLSDYRALAVFDFLVDKGISPVKLKHSGRGEYNPIASNDTAEGR 249
Query: 144 AKNRRAIVFL 153
A+NRR + +
Sbjct: 250 AQNRRVEIKI 259
>gi|148265913|ref|YP_001232619.1| OmpA/MotB domain-containing protein [Geobacter uraniireducens Rf4]
gi|146399413|gb|ABQ28046.1| OmpA/MotB domain protein [Geobacter uraniireducens Rf4]
Length = 287
Score = 80.6 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 54/130 (41%), Gaps = 8/130 (6%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
+ S L+ + + ++ D+V FD+ ++P + VL + L+ IEGH D
Sbjct: 154 QGQVTISELKGKLTVNMVDAVLFDSGKAEVKPDGLVVLQKVIDILKNIKDKSIRIEGHTD 213
Query: 91 ELGS-------RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
+ ++ L RA V Y +GI + + +YG+ P +
Sbjct: 214 NVSIVGALAKKYPTNWELSAARAINVTRYLQQQGIDPTNLAAIAYGEFKPVAGNDTPEGK 273
Query: 144 AKNRRAIVFL 153
AKNRR + L
Sbjct: 274 AKNRRIEIIL 283
>gi|170728573|ref|YP_001762599.1| OmpA/MotB domain-containing protein [Shewanella woodyi ATCC 51908]
gi|169813920|gb|ACA88504.1| OmpA/MotB domain protein [Shewanella woodyi ATCC 51908]
Length = 224
Score = 80.6 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 57/135 (42%), Gaps = 1/135 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
+ + T ++ + + ++ + V F + +VL+++ +++D
Sbjct: 87 TQEAELRKQLQSTGVSVTRSGDNIILNMPNEVTFGVDETHLSAGAKRVLNSVALVAKEYD 146
Query: 81 -CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ G D GS + ++ L RA V +Y V++ + R+K G+E P
Sbjct: 147 KTRLNVLGFTDSSGSESYNLRLSKVRAVEVADYLVSQKVEYVRVKSDGMGEERPIASNAT 206
Query: 140 EDAYAKNRRAIVFLK 154
++ A+NRR + L
Sbjct: 207 KEGRAENRRVEIILS 221
>gi|167648381|ref|YP_001686044.1| peptidoglycan-associated lipoprotein [Caulobacter sp. K31]
gi|167350811|gb|ABZ73546.1| peptidoglycan-associated lipoprotein [Caulobacter sp. K31]
Length = 185
Score = 80.6 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 46/126 (36%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDC 81
+ SP + F ++G+ ++FDT Y IR L+ W
Sbjct: 49 TAPSTPQSPIPQGPLPGTVQDFVINIGERIYFDTDQYDIRSDAQPTLAAQAQWLNRYPAV 108
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
IEG+ADE G+R ++ALG RRA AV + VA+G+S SR++ SYGKE P G E+
Sbjct: 109 RVRIEGNADERGTREYNLALGARRANAVREFLVAQGVSGSRIETLSYGKEKPIDGGSGEE 168
Query: 142 AYAKNR 147
++AKNR
Sbjct: 169 SWAKNR 174
>gi|327403673|ref|YP_004344511.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
16823]
gi|327319181|gb|AEA43673.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
Length = 223
Score = 80.6 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAV 109
++ F+T ++P L+NL +++ I+GH D G ++ L +RA +V
Sbjct: 119 NLQFETGKSDLKPISYGALNNLVEIMKRKKEIKIQIDGHTDSDGDNQANQQLSQKRAESV 178
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
NY +++GI A+R+K G+ P + A+NRR + +
Sbjct: 179 RNYLISKGIDATRVKAKGNGESKPIADNNTAQGKAQNRRTEITI 222
>gi|320353100|ref|YP_004194439.1| OmpA/MotB domain-containing protein [Desulfobulbus propionicus DSM
2032]
gi|320121602|gb|ADW17148.1| OmpA/MotB domain protein [Desulfobulbus propionicus DSM 2032]
Length = 1326
Score = 80.6 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 46/131 (35%), Gaps = 1/131 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK-HD 80
D D SP + V F + + + L + + L
Sbjct: 1191 DAADLCPGSPAGSPVNGLGCPAGKGIILQGVNFASGTAVFTQESRKNLDTVAAALAHVPQ 1250
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ G+ D G ++ L +RA +V +Y +G++ +++ YGKE P
Sbjct: 1251 MRVEVAGYTDSAGDPKKNLDLSAQRAQSVVDYLQTKGVARAQLTAKGYGKENPIADNATA 1310
Query: 141 DAYAKNRRAIV 151
KNRR +
Sbjct: 1311 AGKQKNRRVEL 1321
>gi|170701074|ref|ZP_02892051.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria
IOP40-10]
gi|172059753|ref|YP_001807405.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria
MC40-6]
gi|170134014|gb|EDT02365.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria
IOP40-10]
gi|171992270|gb|ACB63189.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria
MC40-6]
Length = 169
Score = 80.6 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 14/166 (8%)
Query: 1 MQYSTIFIILSAITMMSISGI-------DNLDTKISSPDTV------LNESSLQEQFSSS 47
M + + L+ + + +++ D + S +N L + S
Sbjct: 1 MMSNKARLALAVMMISALAACKSGVKLDDKANAGAVSTQPSADNVAQVNVDPLNDPNSPL 60
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRA 106
S++FD SYS++ ++ +L+ H LI+G+ DE G+ ++ALG +RA
Sbjct: 61 AKRSIYFDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNTDERGTSEYNLALGQKRA 120
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
AV G++ S+M+ S GKE P GHDE ++A+NRRA +
Sbjct: 121 EAVRRAMALLGVNDSQMEAVSLGKEKPQASGHDEASWAQNRRADLV 166
>gi|301155739|emb|CBW15207.1| peptidoglycan-associated outer membrane lipoprotein [Haemophilus
parainfluenzae T3T1]
Length = 156
Score = 80.6 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 3/154 (1%)
Query: 1 MQY--STIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSS 58
M ++ + S + + S +N + + + ++V+F
Sbjct: 1 MNKFVKSLLVAGSVAALAACSSSNNDAAGNGANNNGQTFGGYSVEDLQQRYNTVYFGFDK 60
Query: 59 YSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG 117
++I +Q+L ++L ++EG+ DE G+ +IALG RRA AV + +G
Sbjct: 61 FNIEGEYVQILDAHAAYLNATPASKVVVEGNTDERGTPEYNIALGQRRADAVKGFLAGKG 120
Query: 118 ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ A ++ SYG+E P+V GHDE AY+KNRRA++
Sbjct: 121 VDAGKVSTVSYGEEKPAVLGHDEAAYSKNRRAVL 154
>gi|121533592|ref|ZP_01665419.1| OmpA/MotB domain protein [Thermosinus carboxydivorans Nor1]
gi|121307583|gb|EAX48498.1| OmpA/MotB domain protein [Thermosinus carboxydivorans Nor1]
Length = 257
Score = 80.6 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 5/121 (4%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS--- 94
+ + + DS+ FD +RP + +L + L++ D +EGHAD L
Sbjct: 117 TVSERGLTIRFLDSILFDLGRAELRPDALPLLDAVADALKQTDNYIRVEGHADNLPINTA 176
Query: 95 -RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
S+ L R+ AV YF+ + R+ YG+ P E AKNRR +
Sbjct: 177 QFPSNWELSAARSIAVTRYFIDKHGLEPRRLSSLGYGEYRPLYPNTSEANRAKNRRVDIV 236
Query: 153 L 153
+
Sbjct: 237 I 237
>gi|89900877|ref|YP_523348.1| OmpA/MotB [Rhodoferax ferrireducens T118]
gi|89345614|gb|ABD69817.1| OmpA/MotB [Rhodoferax ferrireducens T118]
Length = 177
Score = 80.6 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 53/174 (30%), Positives = 81/174 (46%), Gaps = 25/174 (14%)
Query: 3 YSTIFIILSAITMMSISG----------IDNLDTKISSPDTVLNESSLQEQFSSSV---- 48
IF+IL+ +M+ G +D T + P + S++ + +SV
Sbjct: 1 MKRIFLILAVTALMAGCGSTTNLDEVPVVDKTGTSVLPPGANGSGSAVGKGDVTSVDVGA 60
Query: 49 ----------GDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNS 97
V+FD SY I+P ++ +L+ IEGH DE G R
Sbjct: 61 SSQNAAIVGGPRVVYFDYDSYVIKPEFQSLIEVHARYLKADKSRKVAIEGHTDERGGREY 120
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
++ALG +RA AV + G+ S+++ S+GKE P+V G DE A AKNRRA +
Sbjct: 121 NLALGQKRAEAVRSALGLLGVVDSQVEAVSFGKEKPAVQGSDEAAMAKNRRAEI 174
>gi|313497484|gb|ADR58850.1| OmpA/MotB domain protein [Pseudomonas putida BIRD-1]
Length = 239
Score = 80.2 bits (196), Expect = 7e-14, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 1/106 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
+V F S + PA Q L + + GH D +GS + + AL RRA
Sbjct: 133 NGAVMFAFDSAELTPAAQQRLQGLVAKLNSPTVAKVRVIGHTDSVGSDSYNQALSERRAS 192
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+V Y + +G+ ++ G+ P E+ A+NRR + L
Sbjct: 193 SVAEYLIGQGLEMGKVTSQGRGESEPVTDNETEEGRARNRRVELHL 238
>gi|294638308|ref|ZP_06716561.1| OmpA family protein [Edwardsiella tarda ATCC 23685]
gi|291088561|gb|EFE21122.1| OmpA family protein [Edwardsiella tarda ATCC 23685]
Length = 219
Score = 80.2 bits (196), Expect = 7e-14, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD++S +++PA L+ + L+++ + G+ D
Sbjct: 94 GTGVSVTRQGDNIVLNMPNNVTFDSNSSNLKPAGANTLTGVAMVLKEYQKTAVNVVGYTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GSR+ ++ L +RA +V + + +G++A R++ G P A+NRR
Sbjct: 154 STGSRDLNMRLSQQRADSVASALITQGVAAGRIRTIGMGPANPIASNSTAAGKAQNRRVE 213
Query: 151 VFLK 154
+ L
Sbjct: 214 ITLS 217
>gi|237742388|ref|ZP_04572869.1| outer membrane porin F [Fusobacterium sp. 4_1_13]
gi|256845716|ref|ZP_05551174.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_36A2]
gi|294785038|ref|ZP_06750326.1| outer membrane porin F [Fusobacterium sp. 3_1_27]
gi|229430036|gb|EEO40248.1| outer membrane porin F [Fusobacterium sp. 4_1_13]
gi|256719275|gb|EEU32830.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_36A2]
gi|294486752|gb|EFG34114.1| outer membrane porin F [Fusobacterium sp. 3_1_27]
Length = 182
Score = 80.2 bits (196), Expect = 7e-14, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALG 102
S+ + + FD Y ++ LS L E D I+G+ D +G+ ++ L
Sbjct: 69 LILSMPELILFDFDKYVVKDKIKPSLSTLAKALGENKDIHIKIDGYTDFIGTEAYNLDLS 128
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
++RA A+ ++ +++G S + + YG++ P+ ++NRR +
Sbjct: 129 VKRARAIKDFLISKGAIGSNISIEGYGEQNPADTNQTAAGRSRNRRVEFIIS 180
>gi|78223750|ref|YP_385497.1| OmpA/MotB [Geobacter metallireducens GS-15]
gi|78195005|gb|ABB32772.1| OmpA/MotB [Geobacter metallireducens GS-15]
Length = 292
Score = 80.2 bits (196), Expect = 7e-14, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 56/131 (42%), Gaps = 8/131 (6%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHA 89
+ S L+ + + ++ D++ FD+ ++ ++VL+ + L+ D IEGH
Sbjct: 153 AQGQVTISELKGKLTVNMVDAILFDSGKAEVKQGGMEVLAKVVDILKGVQDKMIRIEGHT 212
Query: 90 DELGS-------RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
D + ++ L RA V Y +GI + + + G+ P E+
Sbjct: 213 DNVQIVGNLTKRFPTNWELSAARAINVARYLQGQGIDPTVLVAVANGEYRPVASNDTEEG 272
Query: 143 YAKNRRAIVFL 153
AKNRR + L
Sbjct: 273 RAKNRRIEIVL 283
>gi|110639097|ref|YP_679306.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
gi|110281778|gb|ABG59964.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
Length = 648
Score = 80.2 bits (196), Expect = 7e-14, Method: Composition-based stats.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 2/132 (1%)
Query: 25 DTKISSPDTVLNESSLQEQFSSS-VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CD 82
DT + + + +++ + +V+F+++ + L+ LG +L+ H +
Sbjct: 517 DTAAVKDSVIHKVTDTIKTIAAAEIAKTVYFESNRADLNAEAKTELNQLGIYLDTHKEAN 576
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
I GHAD LGS + AL +RA A Y A+GISA+R+KV S+G E P +
Sbjct: 577 VYISGHADALGSAAINNALSQKRAQAAAVYLKAKGISAARIKVESFGSEKPVETNATVEG 636
Query: 143 YAKNRRAIVFLK 154
AKNRR + +K
Sbjct: 637 RAKNRRVQIVVK 648
>gi|330962099|gb|EGH62359.1| hypothetical protein PMA4326_26442 [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 437
Score = 80.2 bits (196), Expect = 7e-14, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 40/123 (32%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+ ++ ++ F + S +I ++ + + K D I GH+D
Sbjct: 309 VAVEDAVDRSVVTIRGDELFASGSATIVDDFQPLMLRIADAIRKVKGDVRITGHSDNRPI 368
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
S+ AL RA V A+ R P + AKNRR
Sbjct: 369 ATLRFPSNWALSQARAEQVLRILAAKTGQPQRFTAEGRSDTEPLGSNATAEGRAKNRRVE 428
Query: 151 VFL 153
+ +
Sbjct: 429 ITV 431
>gi|110834272|ref|YP_693131.1| OmpA family protein [Alcanivorax borkumensis SK2]
gi|110647383|emb|CAL16859.1| OmpA family protein [Alcanivorax borkumensis SK2]
Length = 221
Score = 80.2 bits (196), Expect = 7e-14, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 51/123 (41%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
++ + E ++ ++ F T S ++P+ VL + L+++ + GH D
Sbjct: 94 GAGVSVTRDGENIILNMPGNLTFATDSTDVKPSFDPVLEAVAEVLKEYKSTMIQVAGHTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G ++ L +RA AV N A G+ R+ +G+ P +NRR
Sbjct: 154 STGGDRYNLLLSQQRAQAVSNKLSAFGVEQVRLDPVGFGETQPIASNSSASGREQNRRVE 213
Query: 151 VFL 153
+ L
Sbjct: 214 LTL 216
>gi|320182069|gb|EFW56974.1| Outer membrane protein A precursor [Shigella boydii ATCC 9905]
Length = 219
Score = 80.2 bits (196), Expect = 8e-14, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD+SS +++PA L+ + L+++ + G+ D
Sbjct: 94 GTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + ++ L +RA +V + + +G+ ASR++ G P + A+NRR
Sbjct: 154 STGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVE 213
Query: 151 VFLK 154
+ L
Sbjct: 214 ITLS 217
>gi|315605392|ref|ZP_07880435.1| OmpA family protein [Actinomyces sp. oral taxon 180 str. F0310]
gi|315312961|gb|EFU61035.1| OmpA family protein [Actinomyces sp. oral taxon 180 str. F0310]
Length = 184
Score = 80.2 bits (196), Expect = 8e-14, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 51/126 (40%), Gaps = 2/126 (1%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLI 85
+ + D ++ ++ +++ V F+ S + ++L +L S + +
Sbjct: 56 SVGTTDGAVSTKQKKDTTITTLSGDVNFEVDSDQLTARAREILDSLASEWSKTKPSKVSV 115
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
GH D + ++ L RRA AV +Y ++ + G+ P ++ A+
Sbjct: 116 TGHTDSVADDAHNLDLSKRRAKAVGDYLASKVP-GLSITTDGKGEAEPIADNETDEGRAQ 174
Query: 146 NRRAIV 151
NRR +
Sbjct: 175 NRRVEI 180
>gi|90022173|ref|YP_528000.1| peptidoglycan-associated lipoprotein [Saccharophagus degradans
2-40]
gi|89951773|gb|ABD81788.1| OmpA/MotB [Saccharophagus degradans 2-40]
Length = 163
Score = 80.2 bits (196), Expect = 8e-14, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 69/160 (43%), Gaps = 9/160 (5%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKISSPD---------TVLNESSLQEQFSSSVGDSV 52
T+ +++ +S + D + E + V
Sbjct: 3 NIKTLLSLVAVFAFVSGCSSTGKTKGEADTDMNNTVEEQVETVVEVADPRDALIGVDTVF 62
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
+FD +R L +++ + +EGHADE GSR ++ALG RRA AV ++
Sbjct: 63 YFDFDQAMLRSEARAALLIHAKVIKETNASIRLEGHADERGSREYNMALGERRANAVRDF 122
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
V +G+ + ++ SYG+E + G +E A++KNRR +
Sbjct: 123 LVLQGVPSYSIETVSYGEERAAQVGSNESAWSKNRRVEIK 162
>gi|148259686|ref|YP_001233813.1| OmpA/MotB domain-containing protein [Acidiphilium cryptum JF-5]
gi|146401367|gb|ABQ29894.1| OmpA/MotB domain protein [Acidiphilium cryptum JF-5]
Length = 227
Score = 80.2 bits (196), Expect = 8e-14, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 49/135 (36%), Gaps = 1/135 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
+ + V + + +V F T S ++ P +L LG +
Sbjct: 85 AQKQALQRTAQGTGVQVSQTADNRLKLNVPADAGFATGSATLNPRLYPILDQLGQGLQQN 144
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
I G+ D GS + L RA +V Y V+RGIS R+ G + P
Sbjct: 145 PTETVQIIGYTDSTGSNAINYPLSDNRAASVKTYLVSRGISGQRIATRGMGPQDPVASNA 204
Query: 139 DEDAYAKNRRAIVFL 153
A NRR +++
Sbjct: 205 TAAGRAANRRVDIYV 219
>gi|296100590|ref|YP_003610736.1| putative outer membrane lipoprotein [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295055049|gb|ADF59787.1| putative outer membrane lipoprotein [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 220
Score = 80.2 bits (196), Expect = 8e-14, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 64/124 (51%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD+SS +++PA L+ + L++++ + G+ D
Sbjct: 94 GTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYNKTAVNVIGYTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS+ ++ L +RA +V + + +G+ A+R++ + G P + A+NRR
Sbjct: 154 STGSQELNMRLSQQRADSVASSLITQGVEANRIRTSGMGPANPIASNSTAEGKAQNRRVE 213
Query: 151 VFLK 154
+ L
Sbjct: 214 ITLS 217
>gi|212634658|ref|YP_002311183.1| OmpA protein [Shewanella piezotolerans WP3]
gi|212556142|gb|ACJ28596.1| OmpA [Shewanella piezotolerans WP3]
Length = 178
Score = 80.2 bits (196), Expect = 8e-14, Method: Composition-based stats.
Identities = 46/171 (26%), Positives = 74/171 (43%), Gaps = 21/171 (12%)
Query: 3 YSTIFIILSAITMMSISGIDN--------------------LDTKISSPDTVLNESSLQE 42
+ + ++L + + + S ++T +P E +
Sbjct: 7 FKAMLVVLPIMAISACSSTSESETDATSSTESSTTGSANNGVETGGVAPVLTPAEQQQLK 66
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIAL 101
++FD S+ +VL G + +E + +IEGHADE G+ +IAL
Sbjct: 67 FQELRKEHIIYFDFDRSSVSQQFAEVLEAHGDYLVEHPNVRVMIEGHADERGTPEYNIAL 126
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
G RRA AV Y G+ S+M V SYG+E P +D +AKNRRA++
Sbjct: 127 GERRAKAVAKYLQGMGVQPSQMSVVSYGEEKPMDLSRTDDGFAKNRRAVLV 177
>gi|325954634|ref|YP_004238294.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
gi|323437252|gb|ADX67716.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
Length = 234
Score = 80.2 bits (196), Expect = 8e-14, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 3/135 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDS--VFFDTSSYSIRPADIQVLSNLGSWLEKH 79
D KI E + + ++ V FD +S ++ L L +++
Sbjct: 84 DKQAEKIEQVLPGAEVVRTDEGINLILNENSSVTFDYNSENLTSKAKNSLDKLIQVFKEY 143
Query: 80 D-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ LI GH D +GS+N ++ L +RA +V NY V++GIS+SR+ G P
Sbjct: 144 PDTNLLIVGHTDNVGSQNFNLPLSEKRAKSVVNYLVSKGISSSRLTSKGVGLSEPIADNS 203
Query: 139 DEDAYAKNRRAIVFL 153
A+NRR + +
Sbjct: 204 TAAGRAQNRRVEIAI 218
>gi|256425882|ref|YP_003126535.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
gi|256040790|gb|ACU64334.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
Length = 630
Score = 80.2 bits (196), Expect = 8e-14, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 55/131 (41%), Gaps = 1/131 (0%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCD 82
+ S + + V ++FFDT ++++ L+ + E
Sbjct: 497 KNVSPDSSFYREIALQPLDTSAVLVLHNIFFDTRQFALKTGSELELNRLVALLRENPTVT 556
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
I GH D +G+ ++ L RRA AV Y V +GI+A R++ YG+ P
Sbjct: 557 IEISGHTDNIGNTKDNVLLSERRAQAVVKYLVDKGIAAERLQAKGYGETKPVADNMTAAG 616
Query: 143 YAKNRRAIVFL 153
A+NRR + +
Sbjct: 617 RAENRRTELKI 627
>gi|322418762|ref|YP_004197985.1| OmpA/MotB domain-containing protein [Geobacter sp. M18]
gi|320125149|gb|ADW12709.1| OmpA/MotB domain protein [Geobacter sp. M18]
Length = 465
Score = 80.2 bits (196), Expect = 8e-14, Method: Composition-based stats.
Identities = 34/132 (25%), Positives = 55/132 (41%), Gaps = 2/132 (1%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD- 82
K + V + + FD IR ++ +G++++K+
Sbjct: 204 APAKEPPLEPVPAAEPTPGHYKYCITLQGEFDIDQAIIRTELHDQIAQVGNFMKKYPTTT 263
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDED 141
+IEGH D +GS N ++ L RRA AV ++ V + I SR+ YG P E+
Sbjct: 264 AVIEGHTDNVGSYNHNMDLSQRRAEAVVSHLVEQYGIDRSRLSAKGYGFTRPIADNATEE 323
Query: 142 AYAKNRRAIVFL 153
KNRR +
Sbjct: 324 GRQKNRRIEAVI 335
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FD+ I+P ++ + +++++ +IEGH D GS + ++ L +RA V +Y
Sbjct: 358 FDSGKADIKPQYRDEIAKVADYMKRYTTTTAVIEGHTDNTGSPSQNMKLSQQRAQNVVDY 417
Query: 113 FVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V I SR+ YG Y + KNRR +
Sbjct: 418 LVNNFGIERSRLSAKGYGATRRVAYNDTPEGRQKNRRINAVI 459
>gi|237809441|ref|YP_002893881.1| peptidoglycan-associated lipoprotein [Tolumonas auensis DSM 9187]
gi|237501702|gb|ACQ94295.1| peptidoglycan-associated lipoprotein [Tolumonas auensis DSM 9187]
Length = 171
Score = 80.2 bits (196), Expect = 8e-14, Method: Composition-based stats.
Identities = 51/170 (30%), Positives = 80/170 (47%), Gaps = 18/170 (10%)
Query: 1 MQ----YSTIFIILSAITMMSISGI-------------DNLDTKISSPDTVLNESSLQEQ 43
M+ T+ I + +T+ + S ++T +E + Q+
Sbjct: 1 MKINPLLKTLLIAIPLVTLAACSSKKGSTSADTDGMAGQGVETSGLDSGLSADEQARQQF 60
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALG 102
S + ++F+ S +I Q+L +L H+ LIEGH DE G+ +IALG
Sbjct: 61 ESLKQDNVIYFNYDSDAIEGQYAQLLQTHADFLRGHNSVKVLIEGHTDERGTPEYNIALG 120
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
RRA AV Y G+ S++ V SYG+E P+ GH EDA+ NRRA++
Sbjct: 121 ERRAKAVAKYMQNLGVDVSQLSVVSYGEEKPADPGHAEDAFGHNRRAVLV 170
>gi|163789638|ref|ZP_02184076.1| chemotaxis motB protein [Carnobacterium sp. AT7]
gi|159875170|gb|EDP69236.1| chemotaxis motB protein [Carnobacterium sp. AT7]
Length = 249
Score = 80.2 bits (196), Expect = 8e-14, Method: Composition-based stats.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 5/127 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ + Q+ ++ +S+ F + S I + Q L++LG ++K D +IEG+ D
Sbjct: 116 TSQASVEYDQDGIYVNIQESILFGSGSAIIADSGKQTLNDLGELIQKFDNAVVIEGYTDN 175
Query: 92 LGSRN----SSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ N S+ L RA +V Y R ++ +R+ YG+ P V E+ +KN
Sbjct: 176 VPMYNANFSSNWELSTGRALSVLRYLSEERDVNPTRLAAKGYGEYHPLVPNDSEENRSKN 235
Query: 147 RRAIVFL 153
RR + +
Sbjct: 236 RRVNIVI 242
>gi|156936282|ref|YP_001440198.1| putative outer membrane lipoprotein [Cronobacter sakazakii ATCC
BAA-894]
gi|156534536|gb|ABU79362.1| hypothetical protein ESA_04181 [Cronobacter sakazakii ATCC BAA-894]
Length = 220
Score = 80.2 bits (196), Expect = 8e-14, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 65/135 (48%), Gaps = 1/135 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
+ + T ++ + + ++ ++V FD+S +++PA L+ + L+++
Sbjct: 83 VQEAKLRQKMQGTGVSVTRSGDNIILNMPNNVTFDSSQANLKPAGANTLTGVAMVLKEYP 142
Query: 81 CD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ G+ D G + ++ L +RA +V + + +G++A+R++ + G P
Sbjct: 143 KTAVNVVGYTDSTGGQALNMKLSQQRAESVASALITQGVAANRIRTSGMGPANPVASNST 202
Query: 140 EDAYAKNRRAIVFLK 154
E+ A+NRR + L
Sbjct: 203 EEGKAQNRRVEITLS 217
>gi|110807356|ref|YP_690876.1| putative outer membrane lipoprotein [Shigella flexneri 5 str. 8401]
gi|229088112|ref|NP_709330.3| putative outer membrane lipoprotein [Shigella flexneri 2a str. 301]
gi|229089132|ref|NP_839340.2| putative outer membrane lipoprotein [Shigella flexneri 2a str.
2457T]
gi|110616904|gb|ABF05571.1| putative outer membrane protein [Shigella flexneri 5 str. 8401]
gi|281602912|gb|ADA75896.1| putative outer membrane protein [Shigella flexneri 2002017]
gi|313647591|gb|EFS12041.1| inner membrane lipoprotein yiaD [Shigella flexneri 2a str. 2457T]
gi|332750012|gb|EGJ80424.1| inner membrane lipoprotein yiaD [Shigella flexneri K-671]
gi|332750169|gb|EGJ80580.1| inner membrane lipoprotein yiaD [Shigella flexneri 4343-70]
gi|332751243|gb|EGJ81646.1| inner membrane lipoprotein yiaD [Shigella flexneri 2747-71]
gi|332997456|gb|EGK17072.1| inner membrane lipoprotein yiaD [Shigella flexneri K-218]
gi|333012432|gb|EGK31813.1| inner membrane lipoprotein yiaD [Shigella flexneri K-304]
Length = 216
Score = 80.2 bits (196), Expect = 8e-14, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD+SS ++PA L+ + L+++ + G+ D
Sbjct: 91 GTGVSVTRSGDNIILNMPNNVTFDSSSAPLKPAGANTLTGVAMVLKEYPKTAVNVIGYTD 150
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + ++ L +RA +V + + +G+ ASR++ G P + A+NRR
Sbjct: 151 STGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVE 210
Query: 151 VFLK 154
+ L
Sbjct: 211 ITLS 214
>gi|92113977|ref|YP_573905.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043]
gi|91797067|gb|ABE59206.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043]
Length = 177
Score = 80.2 bits (196), Expect = 8e-14, Method: Composition-based stats.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 24/175 (13%)
Query: 1 MQYS---TIFIILSAITMMSISGIDNLDT--------------------KISSPDTVLNE 37
MQ+ F + ++ +++ + +
Sbjct: 1 MQFKPYAKGFAVALSLAVLAGCSSTGGTQDGSMDGTSGTGAGGTGTASSQGMGDGQGTSG 60
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRN 96
+S+ ++ + +++F +IRP VLS +L+ H + ++EGHADE G+R
Sbjct: 61 TSMSDRDAIPEQRTIYFAFDRDTIRPEFESVLSAHAEYLQSHPNTNVVLEGHADERGTRE 120
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
++ LG RRA AV Y G+SAS++++ SYG+E P+V GHDE++YA+NRR +
Sbjct: 121 YNLGLGERRARAVEQYLTVEGVSASQIEIVSYGEERPAVRGHDEESYAQNRRVVF 175
>gi|134298231|ref|YP_001111727.1| OmpA/MotB domain-containing protein [Desulfotomaculum reducens
MI-1]
gi|134050931|gb|ABO48902.1| OmpA/MotB domain protein [Desulfotomaculum reducens MI-1]
Length = 236
Score = 80.2 bits (196), Expect = 8e-14, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 52/133 (39%), Gaps = 6/133 (4%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLI 85
K ++ T + + + + ++ D FD+ S ++P +++ +GS + + L+
Sbjct: 98 KENNMTTEVETNIINNHLTLTIRDRALFDSGSAVVKPQSRKIIKAMGSILQQYPKFEVLV 157
Query: 86 EGHADELGSRNSSIAL-----GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
GH D N++ R + + + R+ YG+ P
Sbjct: 158 AGHTDNQPIYNNTFESNWDLSSKRALNCMKIMLTNKNLDPRRLVAIGYGEYRPIAENTTT 217
Query: 141 DAYAKNRRAIVFL 153
+ AKNRR V +
Sbjct: 218 EGRAKNRRVEVII 230
>gi|254779677|ref|YP_003057783.1| Peptidoglycan-associated lipoprotein precursor; putative petide
signal [Helicobacter pylori B38]
gi|254001589|emb|CAX29646.1| Peptidoglycan-associated lipoprotein precursor; putative petide
signal [Helicobacter pylori B38]
Length = 179
Score = 80.2 bits (196), Expect = 8e-14, Method: Composition-based stats.
Identities = 38/177 (21%), Positives = 74/177 (41%), Gaps = 24/177 (13%)
Query: 1 MQYSTIFIILSAITMMSISG-------------IDNLDTKISSPDTVLNESSLQEQFSSS 47
M+ S+ F L A +++ + T + + + +++ +
Sbjct: 1 MKRSSAFSFLVAFLLVAGCSHKMDNKTVAGDVSAKTVQTAPVTTEPAPEKEEPKQEPAPV 60
Query: 48 VGDS-----------VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRN 96
V + ++FD Y I+ +D + L + +++ L+EG+ DE GS
Sbjct: 61 VEEKPAVESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEFGSSE 120
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ ALG++R +V N V +G+ +K S+G+ P + Y +NRR V L
Sbjct: 121 YNQALGVKRTLSVKNALVIKGVEKDMIKTISFGETKPKCAQKTRECYKENRRVDVKL 177
>gi|169632713|ref|YP_001706449.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter
baumannii SDF]
gi|169151505|emb|CAP00268.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter
baumannii]
Length = 191
Score = 80.2 bits (196), Expect = 8e-14, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 77/179 (43%), Gaps = 28/179 (15%)
Query: 1 MQYSTI----FIILSAITMMSISGI--------------DNLDTKISSPDTVLNESS--- 39
M +I F +LSA +M+ ++T S D LN +
Sbjct: 3 MMMKSIKHLAFPLLSAALVMTGCASRKPATTATTGTTNPSTVNTTGLSEDAALNAQNLAG 62
Query: 40 ------LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADEL 92
+ ++ V FD S + D Q L + + + + GH DE
Sbjct: 63 ASSKGVTEANKAALAKRIVHFDYDSSDLSTEDYQTLQAHAQFLMANANSKVALTGHTDER 122
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
G+R ++ALG RRA AV NY + G++ +++ SYGKE P GHDE A+ +NRR +
Sbjct: 123 GTREYNMALGERRAKAVQNYLITSGVNPQQLEAVSYGKEAPVNPGHDESAWKENRRVEI 181
>gi|256846182|ref|ZP_05551640.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_36A2]
gi|294784699|ref|ZP_06749987.1| OmpA family protein [Fusobacterium sp. 3_1_27]
gi|256719741|gb|EEU33296.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_36A2]
gi|294486413|gb|EFG33775.1| OmpA family protein [Fusobacterium sp. 3_1_27]
Length = 195
Score = 80.2 bits (196), Expect = 8e-14, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 3/128 (2%)
Query: 34 VLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG 93
L E +E ++ FD ++P ++L+NL ++ K+D + IEGH D +
Sbjct: 49 ALKEEPPEEMTIVLDDRALNFDFDKSFVKPQYDEMLTNLKEFIMKNDYELTIEGHTDYIA 108
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKV-TSYGKEMPSVYGHDEDAYAKNRRAIVF 152
S ++ L RRA AV + G+ SR+ G+E P + AKNRR
Sbjct: 109 SNQYNMGLSKRRAEAVKVKLIELGLDPSRIVAIVPKGEEEPVADNKTTEGRAKNRRVEFK 168
Query: 153 L--KGCRA 158
L +G +
Sbjct: 169 LVKRGSKG 176
>gi|134094293|ref|YP_001099368.1| putative outer membrane protein; putative peptidoglycan-associated
(lipo)-protein [Herminiimonas arsenicoxydans]
gi|133738196|emb|CAL61241.1| conserved hypothetical protein; putative OmpA domain [Herminiimonas
arsenicoxydans]
Length = 225
Score = 80.2 bits (196), Expect = 8e-14, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 47/135 (34%), Gaps = 1/135 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
+ + V + + + + F T I + +L + ++
Sbjct: 76 NQKRAMEQATQGTGVQVTQTSDNRLKLDIPSDISFATGRSDINSSFRPILDRFATGLVDN 135
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
I GH D GS + L RA +Y RG++ R+ V G P
Sbjct: 136 PAATVTIIGHTDSTGSDAINNPLSFDRASRTRDYLAGRGVAPQRIHVDGRGSREPVASNA 195
Query: 139 DEDAYAKNRRAIVFL 153
+E A+NRR +++
Sbjct: 196 NEAGRARNRRVEIYV 210
>gi|325105621|ref|YP_004275275.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
gi|324974469|gb|ADY53453.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
Length = 230
Score = 80.2 bits (196), Expect = 8e-14, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
D +I + E + FD + ++ Q + NL + + D
Sbjct: 83 DKQAKEIEAAIPGAEVIPAGEGIIVKFDSGLLFDFNKATLSATAKQNIDNLAASLNKYPD 142
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
D L+ GH D +G+ + L L RA +V +Y +++G+S+ R+K + GK P +
Sbjct: 143 TDILVVGHTDAIGTDAVNNKLSLERANSVVSYAISKGVSSGRLKSSGKGKTEPIASNDTD 202
Query: 141 DAYAKNRRAIVFL 153
A+NRR + +
Sbjct: 203 AGRAQNRRVEIVI 215
>gi|237806321|ref|ZP_04593025.1| OmpA/MotB [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331027434|gb|EGI07489.1| OmpA/MotB [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 194
Score = 80.2 bits (196), Expect = 8e-14, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 1/125 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHA 89
+T + +Q + ++ F T S +I + L+NL S + + + I G+
Sbjct: 63 ANTGVEVQRQGDQIKLIMPGNITFATDSSAIASSFYSPLNNLASSLKQFNQNNIEIVGYT 122
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GSR ++ L +RA +V Y ++G+ + + V G + P D + A+NRR
Sbjct: 123 DSTGSRQHNMDLSQQRAQSVATYLTSQGVDQTHLSVRGAGPDQPIASNADVNGRAQNRRV 182
Query: 150 IVFLK 154
V LK
Sbjct: 183 EVNLK 187
>gi|170698903|ref|ZP_02889963.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
gi|170136156|gb|EDT04424.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
Length = 247
Score = 80.2 bits (196), Expect = 8e-14, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++ F+T S ++ P Q+L + + + + I GH D G+R S+IAL RA
Sbjct: 140 NRTIEFETGSATLTPQGRQILDQMAAALSKLQNRTVDIIGHTDNSGNRTSNIALSQARAD 199
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV Y + + I +M T G + P + A+NRR +
Sbjct: 200 AVKGYLITKSIPPQQMTTTGVGPDQPIAPNDTAEGRARNRRIEFRV 245
>gi|59801892|ref|YP_208604.1| hypothetical protein NGO1559 [Neisseria gonorrhoeae FA 1090]
gi|260439855|ref|ZP_05793671.1| hypothetical protein NgonDG_01984 [Neisseria gonorrhoeae DGI2]
gi|291043130|ref|ZP_06568853.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|59718787|gb|AAW90192.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
gi|291012736|gb|EFE04719.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|307075938|emb|CBE70801.1| outer membrane protein A [Neisseria gonorrhoeae]
Length = 225
Score = 80.2 bits (196), Expect = 8e-14, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIA 100
Q + +SV F T S ++ + L+ ++ D I GH D GS +
Sbjct: 100 NQIRLVMPESVTFATGSAALGGSAQYALNTAAQTLVQYPDTTLTINGHTDNTGSDAVNNP 159
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA AV Y RG++ASR+ V YG MP + A+NRR + +
Sbjct: 160 LSQHRAQAVAYYLQTRGVAASRLTVYGYGSHMPVASNATVEGRAQNRRVEILI 212
>gi|15804098|ref|NP_290137.1| putative outer membrane lipoprotein [Escherichia coli O157:H7
EDL933]
gi|15833691|ref|NP_312464.1| outer membrane lipoprotein [Escherichia coli O157:H7 str. Sakai]
gi|26250192|ref|NP_756232.1| putative outer membrane lipoprotein [Escherichia coli CFT073]
gi|49176370|ref|YP_026228.1| outer membrane lipoprotein [Escherichia coli str. K-12 substr.
MG1655]
gi|89110462|ref|AP_004242.1| predicted outer membrane lipoprotien [Escherichia coli str. K-12
substr. W3110]
gi|110643800|ref|YP_671530.1| putative outer membrane lipoprotein [Escherichia coli 536]
gi|157158823|ref|YP_001465027.1| putative outer membrane lipoprotein [Escherichia coli E24377A]
gi|157163027|ref|YP_001460345.1| putative outer membrane lipoprotein [Escherichia coli HS]
gi|168746904|ref|ZP_02771926.1| OmpA family protein [Escherichia coli O157:H7 str. EC4113]
gi|168753370|ref|ZP_02778377.1| OmpA family protein [Escherichia coli O157:H7 str. EC4401]
gi|168759642|ref|ZP_02784649.1| OmpA family protein [Escherichia coli O157:H7 str. EC4501]
gi|168765965|ref|ZP_02790972.1| OmpA family protein [Escherichia coli O157:H7 str. EC4486]
gi|168772488|ref|ZP_02797495.1| OmpA family protein [Escherichia coli O157:H7 str. EC4196]
gi|168779701|ref|ZP_02804708.1| OmpA family protein [Escherichia coli O157:H7 str. EC4076]
gi|168785422|ref|ZP_02810429.1| OmpA family protein [Escherichia coli O157:H7 str. EC869]
gi|168797388|ref|ZP_02822395.1| OmpA family protein [Escherichia coli O157:H7 str. EC508]
gi|170018219|ref|YP_001723173.1| putative outer membrane lipoprotein [Escherichia coli ATCC 8739]
gi|170083060|ref|YP_001732380.1| outer membrane lipoprotein [Escherichia coli str. K-12 substr.
DH10B]
gi|170680831|ref|YP_001745838.1| putative outer membrane lipoprotein [Escherichia coli SMS-3-5]
gi|170766985|ref|ZP_02901438.1| OmpA family protein [Escherichia albertii TW07627]
gi|188495948|ref|ZP_03003218.1| OmpA family protein [Escherichia coli 53638]
gi|191165316|ref|ZP_03027159.1| OmpA family protein [Escherichia coli B7A]
gi|191170332|ref|ZP_03031885.1| OmpA family protein [Escherichia coli F11]
gi|193061844|ref|ZP_03042941.1| OmpA family protein [Escherichia coli E22]
gi|193068535|ref|ZP_03049497.1| OmpA family protein [Escherichia coli E110019]
gi|194427518|ref|ZP_03060067.1| OmpA family protein [Escherichia coli B171]
gi|194435666|ref|ZP_03067769.1| OmpA family protein [Escherichia coli 101-1]
gi|195935083|ref|ZP_03080465.1| putative outer membrane lipoprotein [Escherichia coli O157:H7 str.
EC4024]
gi|208808020|ref|ZP_03250357.1| OmpA family protein [Escherichia coli O157:H7 str. EC4206]
gi|208812888|ref|ZP_03254217.1| OmpA family protein [Escherichia coli O157:H7 str. EC4045]
gi|208819372|ref|ZP_03259692.1| OmpA family protein [Escherichia coli O157:H7 str. EC4042]
gi|209400986|ref|YP_002273038.1| OmpA family protein [Escherichia coli O157:H7 str. EC4115]
gi|209921016|ref|YP_002295100.1| putative outer membrane lipoprotein [Escherichia coli SE11]
gi|215488837|ref|YP_002331268.1| putative outer membrane lipoprotein [Escherichia coli O127:H6 str.
E2348/69]
gi|217326256|ref|ZP_03442340.1| OmpA family protein [Escherichia coli O157:H7 str. TW14588]
gi|218556112|ref|YP_002389025.1| putative outer membrane lipoprotein [Escherichia coli IAI1]
gi|218691843|ref|YP_002400055.1| putative outer membrane lipoprotein [Escherichia coli ED1a]
gi|218697269|ref|YP_002404936.1| putative outer membrane lipoprotein [Escherichia coli 55989]
gi|218702317|ref|YP_002409946.1| putative outer membrane lipoprotein [Escherichia coli IAI39]
gi|218707187|ref|YP_002414706.1| putative outer membrane lipoprotein [Escherichia coli UMN026]
gi|227883718|ref|ZP_04001523.1| outer membrane lipoprotein [Escherichia coli 83972]
gi|238902640|ref|YP_002928436.1| putative outer membrane lipoprotein [Escherichia coli BW2952]
gi|254795509|ref|YP_003080346.1| putative outer membrane lipoprotein [Escherichia coli O157:H7 str.
TW14359]
gi|256020901|ref|ZP_05434766.1| putative outer membrane lipoprotein [Shigella sp. D9]
gi|256025721|ref|ZP_05439586.1| putative outer membrane lipoprotein [Escherichia sp. 4_1_40B]
gi|260846733|ref|YP_003224511.1| putative outer membrane lipoprotein [Escherichia coli O103:H2 str.
12009]
gi|260858052|ref|YP_003231943.1| putative outer membrane lipoprotein [Escherichia coli O26:H11 str.
11368]
gi|260870283|ref|YP_003236685.1| putative outer membrane lipoprotein [Escherichia coli O111:H- str.
11128]
gi|261224871|ref|ZP_05939152.1| outer membrane lipoprotein [Escherichia coli O157:H7 str. FRIK2000]
gi|261254230|ref|ZP_05946763.1| putative outer membrane lipoprotein [Escherichia coli O157:H7 str.
FRIK966]
gi|291284929|ref|YP_003501747.1| Inner membrane lipoprotein yiaD precursor [Escherichia coli O55:H7
str. CB9615]
gi|293407175|ref|ZP_06651099.1| outer membrane lipoprotein [Escherichia coli FVEC1412]
gi|293417001|ref|ZP_06659638.1| outer membrane lipoprotein [Escherichia coli B185]
gi|293453862|ref|ZP_06664281.1| outer membrane lipoprotein [Escherichia coli B088]
gi|298382924|ref|ZP_06992519.1| outer membrane lipoprotein [Escherichia coli FVEC1302]
gi|300815222|ref|ZP_07095447.1| OmpA family protein [Escherichia coli MS 107-1]
gi|300822046|ref|ZP_07102189.1| OmpA family protein [Escherichia coli MS 119-7]
gi|300898736|ref|ZP_07117047.1| OmpA family protein [Escherichia coli MS 198-1]
gi|300920432|ref|ZP_07136866.1| OmpA family protein [Escherichia coli MS 115-1]
gi|300925626|ref|ZP_07141493.1| OmpA family protein [Escherichia coli MS 182-1]
gi|300937157|ref|ZP_07152011.1| OmpA family protein [Escherichia coli MS 21-1]
gi|300971377|ref|ZP_07171446.1| OmpA family protein [Escherichia coli MS 45-1]
gi|300976951|ref|ZP_07173686.1| OmpA family protein [Escherichia coli MS 200-1]
gi|301026191|ref|ZP_07189658.1| OmpA family protein [Escherichia coli MS 69-1]
gi|301028182|ref|ZP_07191452.1| OmpA family protein [Escherichia coli MS 196-1]
gi|301304604|ref|ZP_07210713.1| OmpA family protein [Escherichia coli MS 124-1]
gi|301646016|ref|ZP_07245922.1| OmpA family protein [Escherichia coli MS 146-1]
gi|307140242|ref|ZP_07499598.1| putative outer membrane lipoprotein [Escherichia coli H736]
gi|307314313|ref|ZP_07593920.1| OmpA/MotB domain protein [Escherichia coli W]
gi|309796193|ref|ZP_07690604.1| OmpA family protein [Escherichia coli MS 145-7]
gi|312968105|ref|ZP_07782316.1| inner membrane lipoprotein yiaD [Escherichia coli 2362-75]
gi|312972173|ref|ZP_07786347.1| inner membrane lipoprotein yiaD [Escherichia coli 1827-70]
gi|331644263|ref|ZP_08345392.1| inner membrane lipoprotein YiaD [Escherichia coli H736]
gi|331655189|ref|ZP_08356188.1| inner membrane lipoprotein YiaD [Escherichia coli M718]
gi|331659868|ref|ZP_08360806.1| inner membrane lipoprotein YiaD [Escherichia coli TA206]
gi|331665175|ref|ZP_08366076.1| inner membrane lipoprotein YiaD [Escherichia coli TA143]
gi|331670386|ref|ZP_08371225.1| inner membrane lipoprotein YiaD [Escherichia coli TA271]
gi|331675043|ref|ZP_08375800.1| inner membrane lipoprotein YiaD [Escherichia coli TA280]
gi|331679633|ref|ZP_08380303.1| inner membrane lipoprotein YiaD [Escherichia coli H591]
gi|331685215|ref|ZP_08385801.1| inner membrane lipoprotein YiaD [Escherichia coli H299]
gi|332282119|ref|ZP_08394532.1| OmpA family protein [Shigella sp. D9]
gi|54042327|sp|P37665|YIAD_ECOLI RecName: Full=Inner membrane lipoprotein yiaD; Flags: Precursor
gi|12518287|gb|AAG58701.1|AE005582_4 putative outer membrane protein [Escherichia coli O157:H7 str.
EDL933]
gi|26110621|gb|AAN82806.1|AE016768_224 Hypothetical lipoprotein yiaD precursor [Escherichia coli CFT073]
gi|13363911|dbj|BAB37860.1| putative outer membrane protein [Escherichia coli O157:H7 str.
Sakai]
gi|48994946|gb|AAT48190.1| outer membrane lipoprotein [Escherichia coli str. K-12 substr.
MG1655]
gi|85676493|dbj|BAE77743.1| predicted outer membrane lipoprotien [Escherichia coli str. K12
substr. W3110]
gi|110345392|gb|ABG71629.1| putative outer membrane lipoprotein [Escherichia coli 536]
gi|157068707|gb|ABV07962.1| OmpA family protein [Escherichia coli HS]
gi|157080853|gb|ABV20561.1| OmpA family protein [Escherichia coli E24377A]
gi|169753147|gb|ACA75846.1| OmpA/MotB domain protein [Escherichia coli ATCC 8739]
gi|169890895|gb|ACB04602.1| predicted outer membrane lipoprotein [Escherichia coli str. K-12
substr. DH10B]
gi|170124423|gb|EDS93354.1| OmpA family protein [Escherichia albertii TW07627]
gi|170518549|gb|ACB16727.1| OmpA family protein [Escherichia coli SMS-3-5]
gi|187771758|gb|EDU35602.1| OmpA family protein [Escherichia coli O157:H7 str. EC4196]
gi|188018309|gb|EDU56431.1| OmpA family protein [Escherichia coli O157:H7 str. EC4113]
gi|188491147|gb|EDU66250.1| OmpA family protein [Escherichia coli 53638]
gi|189002241|gb|EDU71227.1| OmpA family protein [Escherichia coli O157:H7 str. EC4076]
gi|189358800|gb|EDU77219.1| OmpA family protein [Escherichia coli O157:H7 str. EC4401]
gi|189364720|gb|EDU83139.1| OmpA family protein [Escherichia coli O157:H7 str. EC4486]
gi|189369665|gb|EDU88081.1| OmpA family protein [Escherichia coli O157:H7 str. EC4501]
gi|189374556|gb|EDU92972.1| OmpA family protein [Escherichia coli O157:H7 str. EC869]
gi|189380056|gb|EDU98472.1| OmpA family protein [Escherichia coli O157:H7 str. EC508]
gi|190904718|gb|EDV64424.1| OmpA family protein [Escherichia coli B7A]
gi|190909140|gb|EDV68726.1| OmpA family protein [Escherichia coli F11]
gi|192932634|gb|EDV85231.1| OmpA family protein [Escherichia coli E22]
gi|192958186|gb|EDV88627.1| OmpA family protein [Escherichia coli E110019]
gi|194414558|gb|EDX30831.1| OmpA family protein [Escherichia coli B171]
gi|194425209|gb|EDX41193.1| OmpA family protein [Escherichia coli 101-1]
gi|208727821|gb|EDZ77422.1| OmpA family protein [Escherichia coli O157:H7 str. EC4206]
gi|208734165|gb|EDZ82852.1| OmpA family protein [Escherichia coli O157:H7 str. EC4045]
gi|208739495|gb|EDZ87177.1| OmpA family protein [Escherichia coli O157:H7 str. EC4042]
gi|209162386|gb|ACI39819.1| OmpA family protein [Escherichia coli O157:H7 str. EC4115]
gi|209755238|gb|ACI75931.1| putative outer membrane protein [Escherichia coli]
gi|209755240|gb|ACI75932.1| putative outer membrane protein [Escherichia coli]
gi|209755242|gb|ACI75933.1| putative outer membrane protein [Escherichia coli]
gi|209755244|gb|ACI75934.1| putative outer membrane protein [Escherichia coli]
gi|209755246|gb|ACI75935.1| putative outer membrane protein [Escherichia coli]
gi|209914275|dbj|BAG79349.1| conserved hypothetical protein [Escherichia coli SE11]
gi|215266909|emb|CAS11352.1| predicted outer membrane lipoprotien [Escherichia coli O127:H6 str.
E2348/69]
gi|217322477|gb|EEC30901.1| OmpA family protein [Escherichia coli O157:H7 str. TW14588]
gi|218354001|emb|CAV00488.1| putative outer membrane lipoprotien [Escherichia coli 55989]
gi|218362880|emb|CAR00514.1| putative outer membrane lipoprotien [Escherichia coli IAI1]
gi|218372303|emb|CAR20168.1| putative outer membrane lipoprotien [Escherichia coli IAI39]
gi|218429407|emb|CAR10226.1| putative outer membrane lipoprotien [Escherichia coli ED1a]
gi|218434284|emb|CAR15206.1| putative outer membrane lipoprotien [Escherichia coli UMN026]
gi|227839298|gb|EEJ49764.1| outer membrane lipoprotein [Escherichia coli 83972]
gi|238862715|gb|ACR64713.1| predicted outer membrane lipoprotein [Escherichia coli BW2952]
gi|254594909|gb|ACT74270.1| outer membrane lipoprotein [Escherichia coli O157:H7 str. TW14359]
gi|257756701|dbj|BAI28203.1| predicted outer membrane lipoprotein [Escherichia coli O26:H11 str.
11368]
gi|257761880|dbj|BAI33377.1| predicted outer membrane lipoprotein [Escherichia coli O103:H2 str.
12009]
gi|257766639|dbj|BAI38134.1| predicted outer membrane lipoprotein [Escherichia coli O111:H- str.
11128]
gi|260447432|gb|ACX37854.1| OmpA/MotB domain protein [Escherichia coli DH1]
gi|284923586|emb|CBG36682.1| putative outer membrane protein [Escherichia coli 042]
gi|290764802|gb|ADD58763.1| Inner membrane lipoprotein yiaD precursor [Escherichia coli O55:H7
str. CB9615]
gi|291321988|gb|EFE61419.1| outer membrane lipoprotein [Escherichia coli B088]
gi|291425986|gb|EFE99020.1| outer membrane lipoprotein [Escherichia coli FVEC1412]
gi|291431577|gb|EFF04562.1| outer membrane lipoprotein [Escherichia coli B185]
gi|298276760|gb|EFI18278.1| outer membrane lipoprotein [Escherichia coli FVEC1302]
gi|299878738|gb|EFI86949.1| OmpA family protein [Escherichia coli MS 196-1]
gi|300308421|gb|EFJ62941.1| OmpA family protein [Escherichia coli MS 200-1]
gi|300357615|gb|EFJ73485.1| OmpA family protein [Escherichia coli MS 198-1]
gi|300395632|gb|EFJ79170.1| OmpA family protein [Escherichia coli MS 69-1]
gi|300411301|gb|EFJ94839.1| OmpA family protein [Escherichia coli MS 45-1]
gi|300412565|gb|EFJ95875.1| OmpA family protein [Escherichia coli MS 115-1]
gi|300418280|gb|EFK01591.1| OmpA family protein [Escherichia coli MS 182-1]
gi|300457770|gb|EFK21263.1| OmpA family protein [Escherichia coli MS 21-1]
gi|300525409|gb|EFK46478.1| OmpA family protein [Escherichia coli MS 119-7]
gi|300532114|gb|EFK53176.1| OmpA family protein [Escherichia coli MS 107-1]
gi|300840082|gb|EFK67842.1| OmpA family protein [Escherichia coli MS 124-1]
gi|301075768|gb|EFK90574.1| OmpA family protein [Escherichia coli MS 146-1]
gi|306906028|gb|EFN36548.1| OmpA/MotB domain protein [Escherichia coli W]
gi|307555658|gb|ADN48433.1| putative outer membrane protein [Escherichia coli ABU 83972]
gi|308120254|gb|EFO57516.1| OmpA family protein [Escherichia coli MS 145-7]
gi|310334550|gb|EFQ00755.1| inner membrane lipoprotein yiaD [Escherichia coli 1827-70]
gi|312287364|gb|EFR15273.1| inner membrane lipoprotein yiaD [Escherichia coli 2362-75]
gi|315062837|gb|ADT77164.1| predicted outer membrane lipoprotein [Escherichia coli W]
gi|315138128|dbj|BAJ45287.1| inner membrane lipoprotein yiaD precursor [Escherichia coli DH1]
gi|315254081|gb|EFU34049.1| OmpA family protein [Escherichia coli MS 85-1]
gi|315294130|gb|EFU53482.1| OmpA family protein [Escherichia coli MS 153-1]
gi|315300095|gb|EFU59333.1| OmpA family protein [Escherichia coli MS 16-3]
gi|315618412|gb|EFU98999.1| inner membrane lipoprotein yiaD [Escherichia coli 3431]
gi|320191391|gb|EFW66041.1| putative outer membrane protein [Escherichia coli O157:H7 str.
EC1212]
gi|320201426|gb|EFW76007.1| putative outer membrane protein [Escherichia coli EC4100B]
gi|320639873|gb|EFX09467.1| putative outer membrane lipoprotein [Escherichia coli O157:H7 str.
G5101]
gi|320645036|gb|EFX14060.1| putative outer membrane lipoprotein [Escherichia coli O157:H- str.
493-89]
gi|320650303|gb|EFX18786.1| putative outer membrane lipoprotein [Escherichia coli O157:H- str.
H 2687]
gi|320655878|gb|EFX23801.1| putative outer membrane lipoprotein [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320661658|gb|EFX29073.1| putative outer membrane lipoprotein [Escherichia coli O55:H7 str.
USDA 5905]
gi|320666682|gb|EFX33665.1| putative outer membrane lipoprotein [Escherichia coli O157:H7 str.
LSU-61]
gi|323153881|gb|EFZ40115.1| inner membrane lipoprotein yiaD [Escherichia coli EPECa14]
gi|323160679|gb|EFZ46618.1| inner membrane lipoprotein yiaD [Escherichia coli E128010]
gi|323174210|gb|EFZ59838.1| inner membrane lipoprotein yiaD [Escherichia coli LT-68]
gi|323179484|gb|EFZ65051.1| inner membrane lipoprotein yiaD [Escherichia coli 1180]
gi|323182708|gb|EFZ68110.1| inner membrane lipoprotein yiaD [Escherichia coli 1357]
gi|323376572|gb|ADX48840.1| OmpA/MotB domain protein [Escherichia coli KO11]
gi|323934746|gb|EGB31133.1| OmpA family protein [Escherichia coli E1520]
gi|323939549|gb|EGB35757.1| OmpA family protein [Escherichia coli E482]
gi|323944551|gb|EGB40622.1| OmpA family protein [Escherichia coli H120]
gi|323959435|gb|EGB55094.1| OmpA family protein [Escherichia coli H489]
gi|323966022|gb|EGB61463.1| OmpA family protein [Escherichia coli M863]
gi|323971357|gb|EGB66598.1| OmpA family protein [Escherichia coli TA007]
gi|323975035|gb|EGB70144.1| OmpA family protein [Escherichia coli TW10509]
gi|324007339|gb|EGB76558.1| OmpA family protein [Escherichia coli MS 57-2]
gi|324014213|gb|EGB83432.1| OmpA family protein [Escherichia coli MS 60-1]
gi|324021134|gb|EGB90353.1| OmpA family protein [Escherichia coli MS 117-3]
gi|324116568|gb|EGC10485.1| OmpA family protein [Escherichia coli E1167]
gi|326337443|gb|EGD61278.1| putative outer membrane protein [Escherichia coli O157:H7 str.
1044]
gi|326339968|gb|EGD63775.1| putative outer membrane protein [Escherichia coli O157:H7 str.
1125]
gi|327251203|gb|EGE62896.1| inner membrane lipoprotein yiaD [Escherichia coli STEC_7v]
gi|331036557|gb|EGI08783.1| inner membrane lipoprotein YiaD [Escherichia coli H736]
gi|331047204|gb|EGI19282.1| inner membrane lipoprotein YiaD [Escherichia coli M718]
gi|331053083|gb|EGI25116.1| inner membrane lipoprotein YiaD [Escherichia coli TA206]
gi|331057685|gb|EGI29671.1| inner membrane lipoprotein YiaD [Escherichia coli TA143]
gi|331062448|gb|EGI34368.1| inner membrane lipoprotein YiaD [Escherichia coli TA271]
gi|331067952|gb|EGI39350.1| inner membrane lipoprotein YiaD [Escherichia coli TA280]
gi|331072805|gb|EGI44130.1| inner membrane lipoprotein YiaD [Escherichia coli H591]
gi|331077586|gb|EGI48798.1| inner membrane lipoprotein YiaD [Escherichia coli H299]
gi|332104471|gb|EGJ07817.1| OmpA family protein [Shigella sp. D9]
gi|332345519|gb|AEE58853.1| inner membrane lipoprotein YiaD [Escherichia coli UMNK88]
Length = 219
Score = 80.2 bits (196), Expect = 8e-14, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD+SS +++PA L+ + L+++ + G+ D
Sbjct: 94 GTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + ++ L +RA +V + + +G+ ASR++ G P + A+NRR
Sbjct: 154 STGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVE 213
Query: 151 VFLK 154
+ L
Sbjct: 214 ITLS 217
>gi|209695366|ref|YP_002263295.1| peptidoglycan-associated lipoprotein precursor [Aliivibrio
salmonicida LFI1238]
gi|208009318|emb|CAQ79584.1| peptidoglycan-associated lipoprotein precursor [Aliivibrio
salmonicida LFI1238]
Length = 185
Score = 80.2 bits (196), Expect = 8e-14, Method: Composition-based stats.
Identities = 49/179 (27%), Positives = 78/179 (43%), Gaps = 30/179 (16%)
Query: 3 YSTIFIILSAITMMSIS----------------------------GIDNLDTKISSPDTV 34
++ I L + + + S D + + V
Sbjct: 7 LKSLLIALPVVALSACSSSDSATDSTAGQESTNGTETTSGTAGEGQTDTTVVTVVEGEEV 66
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELG 93
L E ++EQ V +V+F + +I +L+ + + + +EGHADE G
Sbjct: 67 LTEQEVKEQALRQV-QTVYFAFDNSTISSEYEDMLAAHAAFLSKAPEVKVTVEGHADERG 125
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ +IALG RRA AV Y A G+SA ++ + SYG+E P V G + YAKNRRA++
Sbjct: 126 TPEYNIALGERRANAVAKYLQALGVSADQISIVSYGEEKPLVLGQTAEDYAKNRRAVLV 184
>gi|34763974|ref|ZP_00144866.1| Outer membrane porin F [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|27886249|gb|EAA23533.1| Outer membrane porin F [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
Length = 172
Score = 80.2 bits (196), Expect = 8e-14, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 66/170 (38%), Gaps = 26/170 (15%)
Query: 11 SAITMMSISGIDNLD---------TKISSPDTVLNESSLQE----------------QFS 45
A+ + + S K + DT N+ L++
Sbjct: 1 MALLVTACSSTKTTKKTNVGVDSTNKYAVEDTEANKKPLEDIIVFNEEGVTIRREGNNLI 60
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLR 104
S+ + + FD Y ++ LS L E D I+G+ D +G+ ++ L ++
Sbjct: 61 LSMPELILFDFDKYVVKDKIKPSLSTLAKALGENKDIHIKIDGYTDFIGTEAYNLDLSVK 120
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RA A+ ++ +++G S + + YG++ P+ ++NRR +
Sbjct: 121 RARAIKDFLISKGAIGSNISIEGYGEQNPADTNQTAAGRSRNRRVEFIIS 170
>gi|257125214|ref|YP_003163328.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b]
gi|257049153|gb|ACV38337.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b]
Length = 173
Score = 80.2 bits (196), Expect = 8e-14, Method: Composition-based stats.
Identities = 32/169 (18%), Positives = 65/169 (38%), Gaps = 18/169 (10%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQE-----------------QF 44
+ S I +LS + + + S + T + + + E
Sbjct: 3 KKSKITAMLSVLLVSAPSTAKKITTSNLRNNAMKTTAVEIEGVNIDDLNTKEDKIKENDI 62
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLR 104
+++ FD +S +I+ VL L +++E + I G+ D G++ + L LR
Sbjct: 63 IVLDANALKFDFNSATIKEEYTPVLEKLKNYIESKNHKISITGYTDSKGTKEYNRELSLR 122
Query: 105 RAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
RA +V + G++ ++ + G P E+ + NRR +
Sbjct: 123 RAESVEEKLIELGLAPEKIIETKGNGDANPIASNDTEEGRSVNRRIEIK 171
>gi|184159157|ref|YP_001847496.1| outer membrane protein [Acinetobacter baumannii ACICU]
gi|213158280|ref|YP_002320331.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii
AB0057]
gi|215482606|ref|YP_002324798.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii
AB307-0294]
gi|239501025|ref|ZP_04660335.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter
baumannii AB900]
gi|301346652|ref|ZP_07227393.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii
AB056]
gi|301513292|ref|ZP_07238529.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii
AB058]
gi|301596453|ref|ZP_07241461.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii
AB059]
gi|183210751|gb|ACC58149.1| Outer membrane protein [Acinetobacter baumannii ACICU]
gi|193078077|gb|ABO13012.2| peptidoglycan-associated lipoprotein precursor [Acinetobacter
baumannii ATCC 17978]
gi|213057440|gb|ACJ42342.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii
AB0057]
gi|213988269|gb|ACJ58568.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii
AB307-0294]
Length = 187
Score = 80.2 bits (196), Expect = 8e-14, Method: Composition-based stats.
Identities = 49/177 (27%), Positives = 76/177 (42%), Gaps = 26/177 (14%)
Query: 1 MQYST--IFIILSAITMMSISGI--------------DNLDTKISSPDTVLNESS----- 39
M+ F +LSA +M+ ++T S D LN +
Sbjct: 1 MKSIKYLAFPLLSAALVMTGCASRKPATTATTGTTNPSTVNTTGLSEDAALNAQNLAGAS 60
Query: 40 ----LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGS 94
+ ++ V FD S + D Q L + + + + GH DE G+
Sbjct: 61 SKGVTEANKAALAKRVVHFDYDSSDLSTEDYQTLQAHAQFLMANANSKVALTGHTDERGT 120
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
R ++ALG RRA AV NY + G++ +++ SYGKE P GHDE A+ +NRR +
Sbjct: 121 REYNMALGERRAKAVQNYLITSGVNPQQLEAVSYGKEAPVNPGHDESAWKENRRVEI 177
>gi|30043431|gb|AAP19151.1| putative outer membrane protein [Shigella flexneri 2a str. 2457T]
gi|56383924|gb|AAN45037.2| putative outer membrane protein [Shigella flexneri 2a str. 301]
gi|332763439|gb|EGJ93678.1| ompA family protein [Shigella flexneri 2930-71]
Length = 208
Score = 80.2 bits (196), Expect = 8e-14, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD+SS ++PA L+ + L+++ + G+ D
Sbjct: 83 GTGVSVTRSGDNIILNMPNNVTFDSSSAPLKPAGANTLTGVAMVLKEYPKTAVNVIGYTD 142
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + ++ L +RA +V + + +G+ ASR++ G P + A+NRR
Sbjct: 143 STGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVE 202
Query: 151 VFLK 154
+ L
Sbjct: 203 ITLS 206
>gi|317180858|dbj|BAJ58644.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
F32]
Length = 179
Score = 80.2 bits (196), Expect = 8e-14, Method: Composition-based stats.
Identities = 38/177 (21%), Positives = 74/177 (41%), Gaps = 24/177 (13%)
Query: 1 MQYSTIFIILSAITMMSISG-------------IDNLDTKISSPDTVLNESSLQEQFSSS 47
M+ S+ F L A +++ + T + + + +++ +
Sbjct: 1 MKRSSAFSFLVAFLLVAGCSHKMDNKTVAGDVSAKTVQTAPVTTEPAPEKEEPKQEPAPV 60
Query: 48 VGDS-----------VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRN 96
V + ++FD Y I+ +D + L + +++ L+EG+ DE GS
Sbjct: 61 VEEKPAVESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEFGSSE 120
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ ALG++R +V N V +G+ +K S+G+ P + Y +NRR V L
Sbjct: 121 YNQALGVKRTLSVKNALVIKGVEKDMIKTISFGETKPKCIQKTRECYKENRRVDVKL 177
>gi|304398041|ref|ZP_07379916.1| OmpA/MotB domain protein [Pantoea sp. aB]
gi|304354327|gb|EFM18699.1| OmpA/MotB domain protein [Pantoea sp. aB]
Length = 219
Score = 80.2 bits (196), Expect = 8e-14, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD++S +++PA L+ + L+++ + G+ D
Sbjct: 94 GTGVSVTRNGDNIVLNMPNNVTFDSNSSNLKPAGANTLTGVSMVLKEYPKTAVNVVGYTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GSR ++ L +RA +V + + +G+++ R++ G + P E A+NRR
Sbjct: 154 STGSRALNMRLSQQRAESVASALIVQGVASDRLRTQGAGPDNPVATNSTEAGKAQNRRVE 213
Query: 151 VFLK 154
+ L
Sbjct: 214 ITLS 217
>gi|255530097|ref|YP_003090469.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366]
gi|255343081|gb|ACU02407.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366]
Length = 263
Score = 80.2 bits (196), Expect = 8e-14, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 46/133 (34%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
D +I + E + F + + +L +
Sbjct: 116 DKQAAEIQNAIPNAEVIREGEGIIVKFDSGILFGFDKSDLTAQAKTNIKSLAGSLNQYPG 175
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
D + GH D G+ ++ L RRA AV Y V++G+ +SR+ G P E
Sbjct: 176 TDIKVIGHTDNKGTEAYNMGLSERRAAAVKAYAVSQGVPSSRLITIGKGFSEPIEDNSTE 235
Query: 141 DAYAKNRRAIVFL 153
A NRR V +
Sbjct: 236 AGRAANRRVEVVI 248
>gi|85706177|ref|ZP_01037272.1| OmpA domain protein [Roseovarius sp. 217]
gi|85669341|gb|EAQ24207.1| OmpA domain protein [Roseovarius sp. 217]
Length = 219
Score = 80.2 bits (196), Expect = 8e-14, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 49/115 (42%), Gaps = 1/115 (0%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSS 98
++ ++ + F S+++ L + L+ + + GH D G+ + +
Sbjct: 101 TGDRLILTMPQDILFPVDSFTVASVLRDDLLKVAQSLQAYPDTTVQVVGHTDSDGAASYN 160
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+L RRA AV + + G+S R++ G++ P A+NRR + +
Sbjct: 161 QSLSERRANAVADVLASGGVSYGRLRAFGRGEDQPVASNLTPQGKAQNRRVEIVI 215
>gi|49081488|gb|AAT50144.1| PA1119 [synthetic construct]
Length = 169
Score = 80.2 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 57/157 (36%), Gaps = 8/157 (5%)
Query: 5 TIFIILSAITM-MSISGIDNLDTKI---SSPDTVLNESS---LQEQFSSSVGDSVFFDTS 57
+ + L+ ++ + ++G + + VL E E + + V F +
Sbjct: 9 SRLLALALFSLVLGLAGCQTKPPQTGLSAEQIAVLQEQGFELRDEGWEFGMSSKVLFGNN 68
Query: 58 SYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
+ P L+ + L +EGH D G + L RRA +V F
Sbjct: 69 LDRLNPDSRNTLTKIARALLAVDIGKVRLEGHTDNYGDEGYNQKLSERRAESVAAVFREA 128
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G+ A+ ++V G P ++NRR + +
Sbjct: 129 GMPAANIEVRGLGMSKPVADNKTRAGRSENRRVAIIV 165
>gi|210135285|ref|YP_002301724.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
P12]
gi|210133253|gb|ACJ08244.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
P12]
Length = 179
Score = 80.2 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 38/177 (21%), Positives = 74/177 (41%), Gaps = 24/177 (13%)
Query: 1 MQYSTIFIILSAITMMSIS-------------GIDNLDTKISSPDTVLNESSLQEQFSSS 47
M+ S++F L A ++ + T + + + +++ +
Sbjct: 1 MKRSSVFSFLVAFLFIAGCKHNMDKETVAGDVSAKTVQTAPVTTEPAPEKEEPKQEPAPV 60
Query: 48 VGDS-----------VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRN 96
V + ++FD Y I+ +D + L + +++ L+EG+ DE GS
Sbjct: 61 VEEKPAVESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEFGSSE 120
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ ALG++R +V N V +G+ +K S+G+ P + Y +NRR V L
Sbjct: 121 YNQALGVKRTLSVKNALVIKGVEKDMIKTISFGETKPKCTQKTRECYKENRRVDVKL 177
>gi|88810227|ref|ZP_01125484.1| OmpA/MotB [Nitrococcus mobilis Nb-231]
gi|88791857|gb|EAR22967.1| OmpA/MotB [Nitrococcus mobilis Nb-231]
Length = 263
Score = 80.2 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 46/117 (39%), Gaps = 2/117 (1%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRN 96
++ ++ V F S ++ A L L ++ E+ I G+ D G+ N
Sbjct: 143 KQTEQGIMLTLSH-VLFAFDSARLQSAAQAPLDKLATYLRERPQIQVKIVGYTDSTGAAN 201
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RRA +V + RG+ + M+V G+ P E NRR L
Sbjct: 202 YNQRLSKRRAQSVADAMAQRGVERASMRVVGRGESNPVASNATEQGRQLNRRVEFTL 258
>gi|332996326|gb|EGK15953.1| inner membrane lipoprotein yiaD [Shigella flexneri VA-6]
Length = 219
Score = 80.2 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD+SS ++PA L+ + L+++ + G+ D
Sbjct: 94 GTGVSVTRSGDNIILNMPNNVTFDSSSAPLKPAGANTLTGVAMVLKEYPKTAVNVIGYTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + ++ L +RA +V + + +G+ ASR++ G P + A+NRR
Sbjct: 154 STGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVE 213
Query: 151 VFLK 154
+ L
Sbjct: 214 ITLS 217
>gi|238895326|ref|YP_002920061.1| hypothetical protein KP1_3385 [Klebsiella pneumoniae NTUH-K2044]
gi|238547643|dbj|BAH63994.1| hypothetical protein KP1_3385 [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 565
Score = 80.2 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 2/125 (1%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELG 93
+ + +Q + + FDT +++P ++L N L K ++ GH D +G
Sbjct: 417 VIKQVVQGPQTIRLDSMALFDTGKSALKPGSTKLLVNSLLGIKAKPGWLIVVAGHTDSIG 476
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ S+ L L+RA AV ++ G V YG P + A+NRR +
Sbjct: 477 NDRSNQQLSLKRAEAVRDWMRDTGDVPESCFAVQGYGASRPVASNETPEGRAQNRRVEIS 536
Query: 153 LKGCR 157
L +
Sbjct: 537 LVPQK 541
>gi|317046265|ref|YP_004113913.1| OmpA/MotB domain-containing protein [Pantoea sp. At-9b]
gi|316947882|gb|ADU67357.1| OmpA/MotB domain protein [Pantoea sp. At-9b]
Length = 220
Score = 80.2 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD+SS +++PA L+ + L+++ + G+ D
Sbjct: 94 GTGVSVTRQGDNIVLNMPNNVTFDSSSSNLKPAGANTLTGVAMVLKEYPKTAVNVTGYTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G+R ++ L +RA +V + + +G+ A+R++ G + P E A+NRR
Sbjct: 154 STGTRALNMRLSQQRAESVASALIVQGVEANRLRTQGLGPDNPVASNSTEAGKAQNRRVE 213
Query: 151 VFL 153
+ L
Sbjct: 214 ITL 216
>gi|89100104|ref|ZP_01172973.1| flagellar motor protein [Bacillus sp. NRRL B-14911]
gi|89085194|gb|EAR64326.1| flagellar motor protein [Bacillus sp. NRRL B-14911]
Length = 229
Score = 80.2 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 48/133 (36%), Gaps = 4/133 (3%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGH 88
+ + V+ + + + + V F++ I + L +GS L +EGH
Sbjct: 90 NGLEDVIVANRTERGVVLVLQEQVLFESGEAEIIDRNSGFLDKVGSLLVGMPNLVKVEGH 149
Query: 89 ADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
D S+ L RA +V Y G+ + R YG P V +
Sbjct: 150 TDNRPIATYRYPSNWELSAARASSVIRYLAGTGVDSKRFIAVGYGDTRPLVPNDSAENLE 209
Query: 145 KNRRAIVFLKGCR 157
KNRR V + R
Sbjct: 210 KNRRVEVIISDPR 222
>gi|295095145|emb|CBK84235.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 220
Score = 80.2 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 67/124 (54%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD+SS +++PA L+ + + L++++ + G+ D
Sbjct: 94 GTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAAVLKEYNKTAVNVIGYTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS++ ++ L +RA +V + +A+G+ A+R++ + G P + A+NRR
Sbjct: 154 STGSQDLNMRLSQQRADSVASSLIAQGVEANRIRTSGMGPANPIASNSTAEGKAQNRRVE 213
Query: 151 VFLK 154
+ L
Sbjct: 214 ITLS 217
>gi|261341826|ref|ZP_05969684.1| hypothetical protein ENTCAN_08313 [Enterobacter cancerogenus ATCC
35316]
gi|288316202|gb|EFC55140.1| OmpA family protein [Enterobacter cancerogenus ATCC 35316]
Length = 220
Score = 80.2 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 67/135 (49%), Gaps = 1/135 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
+ + T ++ + + ++ ++V FD+SS +++PA L+ + L+++
Sbjct: 83 VQEAKLRDKMQGTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYS 142
Query: 81 CD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ G+ D GS++ ++ L +RA +V + + +G++A+R++ + G P
Sbjct: 143 KTAVNVIGYTDSTGSQDLNMRLSQQRADSVASALITQGVAANRIRTSGMGPANPIASNST 202
Query: 140 EDAYAKNRRAIVFLK 154
+ A+NRR + L
Sbjct: 203 AEGKAQNRRVEITLS 217
>gi|94264973|ref|ZP_01288744.1| OmpA/MotB [delta proteobacterium MLMS-1]
gi|93454576|gb|EAT04854.1| OmpA/MotB [delta proteobacterium MLMS-1]
Length = 192
Score = 80.2 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 37/132 (28%), Positives = 70/132 (53%), Gaps = 1/132 (0%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDC 81
D ++ +E +++E +S V+FD IR + +++ G ++ +
Sbjct: 59 AEDELLTDTGERGDELAVREGRTSDPLLPVYFDFDRSHIRGDQEERITHNGEYMLDNRTV 118
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
+EG+ DE G+R ++ALG RRA + Y + GI++ R++ SYG+E P +G DE+
Sbjct: 119 RVRVEGNTDERGTREYNMALGERRAMSAKKYLMDMGIASGRLETVSYGEERPIAFGQDEE 178
Query: 142 AYAKNRRAIVFL 153
+++ NRR +
Sbjct: 179 SWSLNRRVDFVI 190
>gi|183222022|ref|YP_001840018.1| hypothetical protein LEPBI_I2664 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189912089|ref|YP_001963644.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167776765|gb|ABZ95066.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167780444|gb|ABZ98742.1| Putative outer membrane protein; putative signal peptide
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 618
Score = 80.2 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 46/108 (42%), Gaps = 2/108 (1%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
V +++FF S L L + + LIEGH D +G+++++ L L RA
Sbjct: 508 VMNNLFFAFRSSEFAKESEPELDRLAGILKKTTNLKVLIEGHTDNVGTKSANQKLSLERA 567
Query: 107 YAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+V Y ++ R+ V G P E+ A NRR + +
Sbjct: 568 NSVAFYLKSKHKIEDSRISVVGLGPSNPIAENGSEEGRAVNRRVVFKI 615
>gi|82545917|ref|YP_409864.1| outer membrane lipoprotein [Shigella boydii Sb227]
gi|187734257|ref|YP_001882255.1| putative outer membrane lipoprotein [Shigella boydii CDC 3083-94]
gi|81247328|gb|ABB68036.1| putative outer membrane protein [Shigella boydii Sb227]
gi|187431249|gb|ACD10523.1| OmpA family protein [Shigella boydii CDC 3083-94]
gi|320187083|gb|EFW61791.1| Outer membrane protein A precursor [Shigella flexneri CDC 796-83]
gi|332089323|gb|EGI94427.1| inner membrane lipoprotein yiaD [Shigella boydii 3594-74]
Length = 219
Score = 80.2 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD+SS +++PA L+ + L+++ + G+ D
Sbjct: 94 GTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + ++ L +RA +V + + +G+ ASR++ G P + A+NRR
Sbjct: 154 STGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVE 213
Query: 151 VFLK 154
+ L
Sbjct: 214 ITLS 217
>gi|283787805|ref|YP_003367670.1| outer membrane protein [Citrobacter rodentium ICC168]
gi|282951259|emb|CBG90953.1| putative outer membrane protein [Citrobacter rodentium ICC168]
Length = 220
Score = 80.2 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 64/135 (47%), Gaps = 1/135 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
+ + T ++ + + ++ ++V FD+SS +++PA L+ + L+++
Sbjct: 83 VQEAKLRDKMQGTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYP 142
Query: 81 CD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ G+ D G ++ ++ L +RA +V + + +G+ A R++ + G P
Sbjct: 143 KTAVNVIGYTDSTGGQDLNMRLSQQRADSVASALITQGVEAGRIRTSGMGPANPIASNST 202
Query: 140 EDAYAKNRRAIVFLK 154
+ A+NRR + L
Sbjct: 203 AEGKAQNRRVEITLS 217
>gi|254229577|ref|ZP_04922989.1| rickettsia 17 kDa surface antigen family [Vibrio sp. Ex25]
gi|151937860|gb|EDN56706.1| rickettsia 17 kDa surface antigen family [Vibrio sp. Ex25]
Length = 269
Score = 80.2 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
V + + Q + + + F +SSY + + L + +E D +I+G+ D
Sbjct: 143 SGVQVQRVGENQLLLRMENGIGFSSSSYQLDASIHNTLRGVARILVEYPDTSLVIDGYTD 202
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + + L RRA +V + V++ ++ R YG+ P + A NRR
Sbjct: 203 STGSESYNQTLSERRAESVRQFLVSQNVAPGRAIARGYGERNPICSNQTSEGRACNRRVE 262
Query: 151 VFL 153
+ +
Sbjct: 263 IQI 265
>gi|108758523|ref|YP_629116.1| putative chemotaxis protein MotB [Myxococcus xanthus DK 1622]
gi|108462403|gb|ABF87588.1| putative chemotaxis protein MotB [Myxococcus xanthus DK 1622]
Length = 267
Score = 80.2 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 51/127 (40%), Gaps = 5/127 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHAD 90
D + S L+ + + + D + F + S + + L + L+ + +EGH D
Sbjct: 138 DGKIELSELKGKMTVQLKDKILFASGSARVGKEGEEALKKIADALKTVQGKIIRVEGHTD 197
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
++ + S+ L L RA AV G+ + + YG+ P + + N
Sbjct: 198 DVPTGGGQFPSNWELSLARAMAVVRSLQNAGVDPTFLSAAGYGQYQPIAANDSAENRSLN 257
Query: 147 RRAIVFL 153
RR + L
Sbjct: 258 RRIEIVL 264
>gi|310822654|ref|YP_003955012.1| OmpA domain-containing protein [Stigmatella aurantiaca DW4/3-1]
gi|309395726|gb|ADO73185.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 653
Score = 80.2 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 42/115 (36%), Gaps = 1/115 (0%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSS 98
++ V F I+ +L+ + + + +E H D G+ ++
Sbjct: 536 TVADNKLALLQQVQFADGKAVIQANSQPLLAQVVDVIVRNNIQRVRVEAHTDNQGNPAAN 595
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA AV + G+ A+RM+V YG P NRR +
Sbjct: 596 LKLSQERAQAVATFLAQSGLDAARMEVQGYGDARPIAPNLTPRGKELNRRVEFII 650
>gi|317051549|ref|YP_004112665.1| OmpA/MotB domain-containing protein [Desulfurispirillum indicum S5]
gi|316946633|gb|ADU66109.1| OmpA/MotB domain protein [Desulfurispirillum indicum S5]
Length = 252
Score = 80.2 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 52/139 (37%), Gaps = 5/139 (3%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ ++ E ++ + + FD I+PA +L L + + +
Sbjct: 97 AMVQVTGLEDSVEVDSQQDTEGIKVTLAEEILFDRGRAEIKPAAFPILDQLAAIIHQSKR 156
Query: 82 DFLIEGHADELG----SRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVY 136
IEGH D + ++ L R+ V YFV R+ YG+ P V
Sbjct: 157 KVRIEGHTDNVQVPASRYPTNWELSTARSVNVVKYFVQARNLDPRIFVAAGYGEFSPVVP 216
Query: 137 GHDEDAYAKNRRAIVFLKG 155
E AKNRR ++ +G
Sbjct: 217 NITESNRAKNRRVEIYFEG 235
>gi|268595437|ref|ZP_06129604.1| ompA family protein [Neisseria gonorrhoeae 35/02]
gi|268597225|ref|ZP_06131392.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
gi|268599401|ref|ZP_06133568.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae MS11]
gi|268601994|ref|ZP_06136161.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae PID18]
gi|268604326|ref|ZP_06138493.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae PID1]
gi|268682782|ref|ZP_06149644.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae PID332]
gi|268684809|ref|ZP_06151671.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae
SK-92-679]
gi|268687209|ref|ZP_06154071.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae
SK-93-1035]
gi|268548826|gb|EEZ44244.1| ompA family protein [Neisseria gonorrhoeae 35/02]
gi|268551013|gb|EEZ46032.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
gi|268583532|gb|EEZ48208.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae MS11]
gi|268586125|gb|EEZ50801.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae PID18]
gi|268588457|gb|EEZ53133.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae PID1]
gi|268623066|gb|EEZ55466.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae PID332]
gi|268625093|gb|EEZ57493.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae
SK-92-679]
gi|268627493|gb|EEZ59893.1| OmpA/MotB domain-containing protein [Neisseria gonorrhoeae
SK-93-1035]
Length = 216
Score = 80.2 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIA 100
Q + +SV F T S ++ + L+ ++ D I GH D GS +
Sbjct: 91 NQIRLVMPESVTFATGSAALGGSAQYALNTAAQTLVQYPDTTLTINGHTDNTGSDAVNNP 150
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA AV Y RG++ASR+ V YG MP + A+NRR + +
Sbjct: 151 LSQHRAQAVAYYLQTRGVAASRLTVYGYGSHMPVASNATVEGRAQNRRVEILI 203
>gi|254461106|ref|ZP_05074522.1| peptidoglycan-associated lipoprotein [Rhodobacterales bacterium
HTCC2083]
gi|206677695|gb|EDZ42182.1| peptidoglycan-associated lipoprotein [Rhodobacteraceae bacterium
HTCC2083]
Length = 172
Score = 80.2 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 1 MQYSTIFIILSAITMMSISG------------IDNLDTKISSPDTVLNESSLQEQFSSSV 48
M T ++L+++ ++ ++ N+ + F SV
Sbjct: 1 MNMITKAVLLTSVLALAACSNKSDFVGDDVVDLNAGANTGFEGTGGANDPTSVAFFQQSV 60
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
GD V F+ + ++ +L W D +IEGHADE G+R ++ALG RRA
Sbjct: 61 GDRVLFEVDTSTLTGQGRLILDGQTRWLTTNSDYTAIIEGHADEQGTREYNVALGERRAN 120
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V +Y V++G+ +SR++V SYGKE P E YAKNRRA+ L
Sbjct: 121 EVRDYLVSKGVPSSRLRVVSYGKERPIEICSQEGCYAKNRRAVTVL 166
>gi|115376409|ref|ZP_01463646.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
gi|115366616|gb|EAU65614.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
Length = 723
Score = 80.2 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 42/115 (36%), Gaps = 1/115 (0%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSS 98
++ V F I+ +L+ + + + +E H D G+ ++
Sbjct: 606 TVADNKLALLQQVQFADGKAVIQANSQPLLAQVVDVIVRNNIQRVRVEAHTDNQGNPAAN 665
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA AV + G+ A+RM+V YG P NRR +
Sbjct: 666 LKLSQERAQAVATFLAQSGLDAARMEVQGYGDARPIAPNLTPRGKELNRRVEFII 720
>gi|189423758|ref|YP_001950935.1| OmpA/MotB domain protein [Geobacter lovleyi SZ]
gi|189420017|gb|ACD94415.1| OmpA/MotB domain protein [Geobacter lovleyi SZ]
Length = 443
Score = 80.2 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 59/148 (39%), Gaps = 8/148 (5%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSS------VGDSVFFDTSSYSIRPADIQV 68
++ SG + + + + +S+ + V FDT I+
Sbjct: 261 TLTCSGEGGKTSSTAGVEVTEPVKEESAKKASAVAAGARLSLKVNFDTGKSIIKKQYYDE 320
Query: 69 LSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVT 126
L +G E+ + +IEGH D +GS S++AL RRA AV +Y V I R+
Sbjct: 321 LKVVGDGLNEQKNLKGVIEGHTDNVGSDKSNLALSQRRANAVRDYIVKNFKIDRKRLAAK 380
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
YG+ P + +NRR +
Sbjct: 381 GYGESKPIADNATAEGREQNRRIEAVFE 408
>gi|87199040|ref|YP_496297.1| OmpA/MotB [Novosphingobium aromaticivorans DSM 12444]
gi|87134721|gb|ABD25463.1| OmpA/MotB [Novosphingobium aromaticivorans DSM 12444]
Length = 170
Score = 80.2 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 54/163 (33%), Positives = 80/163 (49%), Gaps = 16/163 (9%)
Query: 6 IFIILSAITMMSISGIDNLDTKISSPDTVLNES---------------SLQEQFSSSVGD 50
+ I A +S+ + ++ + S + +S + D
Sbjct: 5 LLIAGLAAATLSLGACASKPKQLPPEPGTTTTTQTAPPPAQPTGPAPGSQADFMASIISD 64
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAV 109
+V FDT Y+I AD VL + +WL ++ IEGH DE G+R+ +IALG RRA +
Sbjct: 65 TVNFDTDRYNIDAADQGVLQSQAAWLARYPGKAITIEGHCDERGTRDYNIALGERRANSA 124
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
NY V+ G+ R+ SYGKE P G DED++AKNRRA+
Sbjct: 125 KNYLVSLGVDPGRITTVSYGKERPLALGSDEDSWAKNRRAVTV 167
>gi|332996878|gb|EGK16497.1| inner membrane lipoprotein yiaD [Shigella flexneri K-272]
gi|333013437|gb|EGK32809.1| inner membrane lipoprotein yiaD [Shigella flexneri K-227]
Length = 219
Score = 80.2 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD+SS ++PA L+ + L+++ + G+ D
Sbjct: 94 GTGVSVTRSGDNIILNMPNNVTFDSSSAPLKPAGANTLTGVAMVLKEYPKTAVNVIGYTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + ++ L +RA +V + + +G+ ASR++ G P + A+NRR
Sbjct: 154 STGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVE 213
Query: 151 VFLK 154
+ L
Sbjct: 214 ITLS 217
>gi|329295648|ref|ZP_08252984.1| putative outer membrane lipoprotein [Plautia stali symbiont]
Length = 157
Score = 80.2 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 23/155 (14%), Positives = 51/155 (32%), Gaps = 3/155 (1%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ + +++ + + S E + + D + F +
Sbjct: 1 MKLKS-CLLVMVLACVGCQSTGRFSDAQIKAMRDAGFSENTEGWGLGLSDKILFGINESD 59
Query: 61 IRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
+ PA ++ + L ++ H D G + + L L+RA AV + +
Sbjct: 60 LTPASKASIAQMAKSLAATGIEHLRVDCHTDNYGKADYNQQLSLKRANAVADQWATGAAI 119
Query: 120 ASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ + G P + A+NRR + +
Sbjct: 120 PRQNIVTRGLGMSAPVASNNTAQGRAQNRRVAIVI 154
>gi|325524318|gb|EGD02423.1| OOP family OmpA-OmpF porin [Burkholderia sp. TJI49]
Length = 254
Score = 80.2 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++ F+T S ++ P Q+L + + + + I GH D G+R S+IAL RA
Sbjct: 147 NRTIEFETGSATLTPQGKQILDQMAAALAKMPNRTVDIIGHTDNSGNRTSNIALSQARAD 206
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV Y + + I+ +M T G + P + A+NRR +
Sbjct: 207 AVKGYLITKSIAPQQMTTTGVGPDQPIAPNDTAEGRARNRRIEFRV 252
>gi|315498712|ref|YP_004087516.1| ompa/motb domain protein [Asticcacaulis excentricus CB 48]
gi|315416724|gb|ADU13365.1| OmpA/MotB domain protein [Asticcacaulis excentricus CB 48]
Length = 187
Score = 80.2 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 2/133 (1%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD 82
+ + DS+ FDT + A QVL++L L++ + +
Sbjct: 53 TQEALTRATAAGKLAEGKFNYSVVLSDDSIKFDTDKAVLSEAGKQVLADLAERLKRDNKN 112
Query: 83 F--LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
I+G D G+ + + LG RA +V + ++G++ +RM SYG E P
Sbjct: 113 VYLEIQGFTDSTGTDDINYRLGNARADSVKRFLNSQGVALNRMASISYGAEQPIAPNSTA 172
Query: 141 DAYAKNRRAIVFL 153
A NRR ++ +
Sbjct: 173 QGRAANRRVVIVV 185
>gi|215433387|gb|ACJ66659.1| OmpA domain protein [Myxococcus fulvus HW-1]
Length = 620
Score = 80.2 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 2/115 (1%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNSS 98
E + D V+F T I +L + S L+ + +EGH D+ G+ +
Sbjct: 493 VEGARIVILDKVYFATGRDVILARSHSLLRQVASTLKANPRIERVRVEGHTDDQGAEAKN 552
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RRA V ++ V GI+A R++ YG+ P NRR +
Sbjct: 553 LDLSQRRAKNVVDFLVKVGIAAERLEAVGYGEAKPVDTNKTAKGRENNRRVEFNI 607
>gi|110598823|ref|ZP_01387080.1| OmpA/MotB [Chlorobium ferrooxidans DSM 13031]
gi|110339554|gb|EAT58072.1| OmpA/MotB [Chlorobium ferrooxidans DSM 13031]
Length = 155
Score = 80.2 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 44/154 (28%), Positives = 76/154 (49%), Gaps = 3/154 (1%)
Query: 1 MQ-YSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSY 59
M+ ++ + L M+ + + +P+ + +GD VF+D
Sbjct: 1 MKPFNPLLRALFIPGMLFLGACCCEKDVVVAPEPPPPPPAPVAVVIPGLGD-VFYDFDKS 59
Query: 60 SIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI 118
++R + L+ W++ + ++EGH DE G+ ++ALG RRA A +Y V G+
Sbjct: 60 ALRSDAVSQLNTNADWMKANRAKSVVVEGHCDERGTNEYNLALGERRANAAKDYIVNLGV 119
Query: 119 SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
ASR+K S+G+E P G E+A+A+NRRA
Sbjct: 120 DASRLKTVSFGEEKPFAAGSTEEAWAQNRRAHFV 153
>gi|94270700|ref|ZP_01291804.1| OmpA/MotB [delta proteobacterium MLMS-1]
gi|93450704|gb|EAT01786.1| OmpA/MotB [delta proteobacterium MLMS-1]
Length = 227
Score = 80.2 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 48/131 (36%), Gaps = 6/131 (4%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHA 89
++ +E+ + D+V FDT I+ ++L LG + ++EGH
Sbjct: 72 QEAGLVTVEDQEEEILVRIQDAVAFDTGRAEIKGDFRELLDQLGEIIYDSQSTMVVEGHT 131
Query: 90 DELG-----SRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAY 143
D + S+ L RA AV Y + R+ ++ P +
Sbjct: 132 DNVPLRPGAPFASNWELSSARAVAVVEYLINEHNIPRDRLAAVAHADGKPVATNDTAEGR 191
Query: 144 AKNRRAIVFLK 154
A NRR ++
Sbjct: 192 AANRRVEFRIR 202
>gi|229593379|ref|YP_002875498.1| hypothetical protein PFLU6014 [Pseudomonas fluorescens SBW25]
gi|229365245|emb|CAY53556.1| putative membrane protein [Pseudomonas fluorescens SBW25]
Length = 429
Score = 80.2 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 43/123 (34%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+ ++ ++ F ++S SI ++ + + K + GH+D
Sbjct: 301 VAVEDAVDRSVVTIRGDELFASASSSIVDDYQPLMLRIADAIRKVKGQVRVTGHSDNRPI 360
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
S+ AL RA +V + A+ A R P + A+NRR
Sbjct: 361 ATLRFPSNWALSEARAKSVLDILAAKTGQADRFSAEGRSDTEPVATNATAEGRARNRRVE 420
Query: 151 VFL 153
+ +
Sbjct: 421 ITV 423
>gi|226945712|ref|YP_002800785.1| peptidoglycan-associated outer membrane lipoprotein [Azotobacter
vinelandii DJ]
gi|226720639|gb|ACO79810.1| peptidoglycan-associated outer membrane lipoprotein [Azotobacter
vinelandii DJ]
Length = 179
Score = 80.2 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 65/110 (59%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIAL 101
++ + + +F+ S ++P ++ L L+ + ++EGH DE G+R ++AL
Sbjct: 68 DEAALRAITTFYFEYDSSDLKPEAMRALDVHARDLKGNGARVVLEGHTDERGTREYNMAL 127
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
G RRA AV Y V +G+S +++++ SYG+E P G DE ++A+NRR +
Sbjct: 128 GERRAKAVQRYLVLQGVSPAQLELVSYGEERPVAGGADEQSWAQNRRVEL 177
>gi|307944419|ref|ZP_07659759.1| outer membrane porin F [Roseibium sp. TrichSKD4]
gi|307772168|gb|EFO31389.1| outer membrane porin F [Roseibium sp. TrichSKD4]
Length = 164
Score = 80.2 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 36/153 (23%), Positives = 66/153 (43%), Gaps = 4/153 (2%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIR 62
T+ + + +++ + + E FS ++G S+ F S ++
Sbjct: 1 MRTLVVTIVMCGVLAACSS---VGGFGQAGSSKPSAGSIEAFSENIGRSILFLEGSAALD 57
Query: 63 PADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS 121
+L N +WL+ + I+GHAD+ G+ ++ L +RA V +A+G+ A
Sbjct: 58 ENSQALLVNQATWLKTYPNWLVKIQGHADDPGTEAANKTLSTQRAEVVQAALIAQGVDAK 117
Query: 122 RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
R+ V YG E P E NRR ++ L+
Sbjct: 118 RLWVKGYGIERPVTDCDPEACQRLNRRVVLNLR 150
>gi|259417844|ref|ZP_05741763.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
gi|259346750|gb|EEW58564.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
Length = 221
Score = 80.2 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 59/123 (47%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHAD 90
+ ++ + ++ S+ + + F T S +I L + L+++ + + GH D
Sbjct: 94 NDSISIVNTGDRLIVSLPNDLTFATDSSAISSVVRSDLRKVAGSLQRYPGSVVQVIGHTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G+ + + +L RRA AV + A G+S +RM++ G++ P + A+NRR
Sbjct: 154 SDGAASYNYSLSERRANAVADEIAAGGVSYNRMRIIGRGEDQPVASNLTAEGKARNRRVE 213
Query: 151 VFL 153
+ +
Sbjct: 214 IVI 216
>gi|284039490|ref|YP_003389420.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
gi|283818783|gb|ADB40621.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
Length = 361
Score = 80.2 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 2/130 (1%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FL 84
++++ + + + V V F+ SSY + P L L ++++
Sbjct: 233 PQVATTSPPVTKPDFNAGTTF-VLHQVQFEQSSYILVPESSAELEKLVRAMKENPLRSID 291
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+ GH D +G ++AL RA V +Y RGI+ R+ YG P + E A
Sbjct: 292 VSGHTDNVGDPRLNLALSENRAKVVASYLKRRGIADDRITTIGYGGTRPIGNNNTEGERA 351
Query: 145 KNRRAIVFLK 154
KNRR + ++
Sbjct: 352 KNRRVEITIR 361
>gi|149925845|ref|ZP_01914109.1| outer membrane protein, OmpA/MotB family [Limnobacter sp. MED105]
gi|149825962|gb|EDM85170.1| outer membrane protein, OmpA/MotB family [Limnobacter sp. MED105]
Length = 222
Score = 80.2 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 52/126 (41%), Gaps = 1/126 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHA 89
+ + + FDT+ ++ L + + L + + + G+
Sbjct: 97 GSQIAVREQRDGSVMLDIPGAALFDTNKSDVKAQFAGTLDQIAATLRDNPNTIVCVIGYT 156
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GS + L +RRA +V N+ A+GIS +R+ G+ P E A+NRR
Sbjct: 157 DSTGSDQYNQDLSVRRAQSVTNFLTAKGISGARLTAAGLGEGFPVASNDTESGRAQNRRV 216
Query: 150 IVFLKG 155
++++
Sbjct: 217 EMYVRN 222
>gi|108757918|ref|YP_632429.1| OmpA domain-containing protein [Myxococcus xanthus DK 1622]
gi|108461798|gb|ABF86983.1| OmpA domain protein [Myxococcus xanthus DK 1622]
Length = 620
Score = 80.2 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 54/139 (38%), Gaps = 6/139 (4%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+I+G+ + D + E + D V+F T I +L + + L
Sbjct: 473 TINGVQDDDGCPDKGKAQV----RVEGARIVILDKVYFGTGQDVILARSHGLLRQVAATL 528
Query: 77 EKHDC--DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
+ + +EGH D+ G+ ++ L RRA V + V GI+A R+ YG+ P
Sbjct: 529 KANPRILMVRVEGHTDDQGNDMKNLDLSQRRARNVVAFLVKEGIAAQRLDAVGYGEAKPV 588
Query: 135 VYGHDEDAYAKNRRAIVFL 153
NRR +
Sbjct: 589 DTNETAKGRENNRRVEFNI 607
>gi|325066515|ref|ZP_08125188.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Actinomyces oris K20]
Length = 359
Score = 80.2 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/147 (21%), Positives = 56/147 (38%), Gaps = 8/147 (5%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+ +S + + P + ++ DSV FD S +R L+NL
Sbjct: 211 STISAKPVPKAGKVGTFPSIDAAKPVQSCGTVITLEDSVLFDFGSSDLRGEASTTLTNLA 270
Query: 74 SWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
+ L+ ++GH D + + L +RA AV + + G +A ++ YG+
Sbjct: 271 TVLKDSKAPKVQVQGHTDSVSDDAFNQKLSEQRAQAVSSALKSNGATAD-LEAVGYGETK 329
Query: 133 PSVYGHDED------AYAKNRRAIVFL 153
P + D NRR VF+
Sbjct: 330 PVAPNENPDGSDNPGGRRLNRRVEVFV 356
>gi|110637965|ref|YP_678172.1| OmpA family outer membrane protein [Cytophaga hutchinsonii ATCC
33406]
gi|110280646|gb|ABG58832.1| outer membrane protein, OmpA family [Cytophaga hutchinsonii ATCC
33406]
Length = 641
Score = 80.2 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
V ++VFFD + ++R L L + + GH D G +++ L RA
Sbjct: 532 VLNNVFFDVNKSTLRKESETELDKLFDILSKNPKIKIEVAGHTDSDGDTQANLTLSDARA 591
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ V +Y + +GISA R+ +G+ P V + NRR + +
Sbjct: 592 HTVKDYLIGKGISADRIIYVGHGEGKPVVPNDTPENKQLNRRTEIKI 638
>gi|78485827|ref|YP_391752.1| OmpA/MotB [Thiomicrospira crunogena XCL-2]
gi|78364113|gb|ABB42078.1| OmpA/MotB family protein [Thiomicrospira crunogena XCL-2]
Length = 187
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 67/138 (48%), Gaps = 1/138 (0%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
S + + + T + ++ +++ G V F+ ++ V+
Sbjct: 48 TSSATDSNAGSGADMAAATNAAGQTAEDLYAALQGKVVNFEFDRSEVQSQFYDVIKMNAD 107
Query: 75 WLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
++ ++G+ DE G+R ++ALG RRA AV N VA G+S SR+ V S+G+E P
Sbjct: 108 YMALNDSAMVTVKGYCDERGTREYNLALGERRANAVKNALVAEGVSPSRINVISFGEENP 167
Query: 134 SVYGHDEDAYAKNRRAIV 151
H+E A+AKNRRA
Sbjct: 168 VDPAHNEAAWAKNRRAEF 185
>gi|295134535|ref|YP_003585211.1| OmpA/MotB family outer hypothetical protein [Zunongwangia profunda
SM-A87]
gi|294982550|gb|ADF53015.1| OmpA/MotB family outer membrane protein [Zunongwangia profunda
SM-A87]
Length = 232
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDS--VFFDTSSYSIRPADIQVLSNLGSWLEKH 79
D KI + + E + + ++ V+F T Y+I + L+ L + +++
Sbjct: 81 DKQAKKIETEVPGAEVERVGEGINVTFDENSGVYFATEKYNINAKSEETLNKLANIFKEY 140
Query: 80 D-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ L+EGH D GS + ++ L RA AV N+ GI+ASR YG+ P
Sbjct: 141 PDTNILVEGHTDNTGSESYNLTLSKNRAQAVTNFLTDHGIAASRFDTKWYGEAQPKYDNS 200
Query: 139 DEDAYAKNRRAIVFL 153
+ +KNRR + +
Sbjct: 201 TAEGRSKNRRVEIAI 215
>gi|258405704|ref|YP_003198446.1| peptidoglycan-associated lipoprotein [Desulfohalobium retbaense DSM
5692]
gi|257797931|gb|ACV68868.1| peptidoglycan-associated lipoprotein [Desulfohalobium retbaense DSM
5692]
Length = 199
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 72/123 (58%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHAD 90
+ ++ +E+ S++ + ++FD S+ ++P VL + + +IEGH D
Sbjct: 75 AKESSGAAEEEKALSNLREEIYFDFDSFELKPDARDVLQDKAALLDDNPGYKMIIEGHCD 134
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
E G++ ++ALG RRA A + + + GI A+R+++ SYG+E P+V G +E A+AKNRR
Sbjct: 135 ERGTQEYNLALGERRARAAYEFLILLGIDANRLQIVSYGEERPAVEGSNEAAWAKNRRCE 194
Query: 151 VFL 153
+
Sbjct: 195 FKI 197
>gi|269968226|ref|ZP_06182255.1| putative lipoprotein [Vibrio alginolyticus 40B]
gi|269827149|gb|EEZ81454.1| putative lipoprotein [Vibrio alginolyticus 40B]
Length = 281
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
V + + Q + + + F +SSY + + L + +E D +I+G+ D
Sbjct: 155 SGVQVQRVGENQLLLRMENGIGFSSSSYQLDASIHNTLRGVARILVEYPDTSLVIDGYTD 214
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + + L RRA +V + V++ ++ R YG+ P + A NRR
Sbjct: 215 STGSESYNQTLSERRAESVRQFLVSQNVAPGRAIARGYGERNPICSNQTSEGRACNRRVE 274
Query: 151 VFL 153
+ +
Sbjct: 275 IQI 277
>gi|194430954|ref|ZP_03063247.1| OmpA family protein [Shigella dysenteriae 1012]
gi|194420409|gb|EDX36485.1| OmpA family protein [Shigella dysenteriae 1012]
gi|332085980|gb|EGI91144.1| inner membrane lipoprotein yiaD [Shigella dysenteriae 155-74]
Length = 219
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD+SS +++PA L+ + L+++ + G+ D
Sbjct: 94 GTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + ++ L +RA +V + + +G+ ASR++ G P + A+NRR
Sbjct: 154 STGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVE 213
Query: 151 VFLK 154
+ L
Sbjct: 214 ITLS 217
>gi|293609016|ref|ZP_06691319.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292829589|gb|EFF87951.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 217
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 1/128 (0%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLI 85
+ + V + + S+ FDT+ +I+P L+ + L + + L+
Sbjct: 86 QQMAGTGVDVGRNPDGSVQLIMPGSITFDTNKSNIKPNFYATLNKVAQTLAEDNKSAILV 145
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
G+ D G+ + +I L RA +V +Y ++G+SASR+ YG P +
Sbjct: 146 TGYTDNTGNDSINIPLSQARAQSVRSYLASQGVSASRIDAQGYGSSNPIADNSTASGREQ 205
Query: 146 NRRAIVFL 153
NRR + +
Sbjct: 206 NRRVEISI 213
>gi|254038735|ref|ZP_04872791.1| conserved hypothetical protein [Escherichia sp. 1_1_43]
gi|226839241|gb|EEH71264.1| conserved hypothetical protein [Escherichia sp. 1_1_43]
gi|309703955|emb|CBJ03298.1| putative outer membrane protein [Escherichia coli ETEC H10407]
Length = 219
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD+SS +++PA L+ + L+++ + G+ D
Sbjct: 94 GTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + ++ L +RA +V + + +G+ ASR++ G P + A+NRR
Sbjct: 154 STGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVE 213
Query: 151 VFLK 154
+ L
Sbjct: 214 ITLS 217
>gi|224373377|ref|YP_002607749.1| major outer membrane protein [Nautilia profundicola AmH]
gi|223589055|gb|ACM92791.1| major outer membrane protein [Nautilia profundicola AmH]
Length = 209
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 2/104 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAV 109
+ FD + ++ L + L+ + + GH D +GS ++ L +RA AV
Sbjct: 100 RLNFDFNKAVVKKIYYPELQKVAEILKNNPNLKIEVAGHTDNIGSDEYNLKLSQKRAEAV 159
Query: 110 FNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
N V + I SR+ YG++ P V E A NRR +
Sbjct: 160 KNILVNKFGIDPSRIVAKGYGEKYPLVPNTTETNRALNRRVEIV 203
>gi|217973703|ref|YP_002358454.1| peptidoglycan-associated lipoprotein [Shewanella baltica OS223]
gi|217498838|gb|ACK47031.1| peptidoglycan-associated lipoprotein [Shewanella baltica OS223]
Length = 178
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 25/177 (14%)
Query: 1 MQYSTIF-IILSAITMMSISGIDNLDTKISSPDTVLNESSLQ------------------ 41
M + + +L A+ +M++S + + N S +
Sbjct: 1 MDLNKLLKAMLVALPIMALSACSSTSESETDAMGSTNGSGSELNGGGIQTGGVGAMLSAE 60
Query: 42 EQFSSSVGD-----SVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
EQ + D ++FD ++ +L G++ +E LIEGHADE G+
Sbjct: 61 EQQRQQLEDLRKQHIIYFDFDRSEVQTDFAAILEAHGTYLVEHPSVRVLIEGHADERGTP 120
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+IALG RRA AV Y G+ ++M V SYG+E P + ++ + KNRRA++
Sbjct: 121 EYNIALGERRAKAVAKYLQGMGVQPTQMSVVSYGEEKPLDFSRTDEGFGKNRRAVLV 177
>gi|311747916|ref|ZP_07721701.1| OmpA family protein [Algoriphagus sp. PR1]
gi|126575910|gb|EAZ80220.1| OmpA family protein [Algoriphagus sp. PR1]
Length = 225
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 57/137 (41%), Gaps = 1/137 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
D ++ + E + + FD ++ L L + +
Sbjct: 75 DKAAEELQRDLEGATVERVGEGIKITFDSGLMFDVDKATLNSNSRDNLMELSETLKKYDE 134
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ L+EGH D GS + ++ L +RAY+V +Y GI SR+++T+YG+ P E
Sbjct: 135 TNILVEGHTDATGSDDYNLDLSRKRAYSVEDYLTNLGIQKSRLEITAYGENQPIATNETE 194
Query: 141 DAYAKNRRAIVFLKGCR 157
+NRR V + +
Sbjct: 195 AGRQQNRRVEVAIYANK 211
>gi|313675999|ref|YP_004053995.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
gi|312942697|gb|ADR21887.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
Length = 671
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 51/117 (43%), Gaps = 1/117 (0%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNS 97
+ ++ + V ++VFF S+ + + L+ + + + +I GH D G
Sbjct: 554 APIKEKAEIVLNNVFFAFDSHELLGSSKSELNRMVEVMNDNSQIEVVIIGHTDSTGPEEY 613
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ L +RA +V NY GI R++ G+ P+ + AKNRR ++
Sbjct: 614 NQVLSEKRAQSVVNYLTQNGIDEERLEYLGKGENEPAYPNDTRENRAKNRRVNFKVE 670
>gi|84388530|ref|ZP_00991077.1| Peptidoglycan-associated lipoprotein [Vibrio splendidus 12B01]
gi|84377079|gb|EAP93950.1| Peptidoglycan-associated lipoprotein [Vibrio splendidus 12B01]
Length = 180
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 27/179 (15%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDTVLNESSLQ--------------- 41
MQ + + I L + + + S D + S ++ S +
Sbjct: 1 MQLNKVLKGLMIALPVMAVTACSSTDEATSATSGTESNQTTSGSEGNVDTTVVTPIDANA 60
Query: 42 -------EQFSSSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELG 93
++ + +++F + +I ++L+ + D + IEGHADE G
Sbjct: 61 QLSEQELKEQALRETQTIYFAFDNSTIAGDYEEILAAHAAYLSNNVDMNVTIEGHADERG 120
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ +IALG RRA AV Y A G+ A ++ + SYG+E P + G ED YAKNRRA++
Sbjct: 121 TPEYNIALGERRAQAVAKYLQALGVQADQISIVSYGEEKPLLLGQSEDVYAKNRRAVLV 179
>gi|296136887|ref|YP_003644129.1| peptidoglycan-associated lipoprotein [Thiomonas intermedia K12]
gi|295797009|gb|ADG31799.1| peptidoglycan-associated lipoprotein [Thiomonas intermedia K12]
Length = 180
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 1/135 (0%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LE 77
+G + + V + +V SV+F +SY++ VL+ ++ +
Sbjct: 43 AGANANGAGQNQVAAVQAPAETNAGPGPNVPKSVYFAFNSYTVESQYTPVLNANATYLTQ 102
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
++G+ D GSR ++ALG +RA AV G+ S+M+ SYGKE P G
Sbjct: 103 HPQAHVQLQGNTDARGSREYNLALGQKRADAVMKGMELLGVKPSQMEAISYGKEKPKALG 162
Query: 138 HDEDAYAKNRRAIVF 152
+ E YA+NRR +
Sbjct: 163 NTEADYAENRRVDIV 177
>gi|83312308|ref|YP_422572.1| Outer membrane protein and related peptidoglycan-associated lipo
protein [Magnetospirillum magneticum AMB-1]
gi|82947149|dbj|BAE52013.1| Outer membrane protein and related peptidoglycan-associated lipo
protein [Magnetospirillum magneticum AMB-1]
Length = 162
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/153 (29%), Positives = 85/153 (55%), Gaps = 7/153 (4%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSL------QEQFSSSVGDSVFFDTSSYSIR 62
+++ + +++ ++ T F +++GD VFFDT+S ++R
Sbjct: 10 VIALLLLVAACESAPQSMSVACVGTPPALPDTRYLPGSPGDFVTNIGDRVFFDTNSSALR 69
Query: 63 PADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS 121
+ L+ WL + +EGHADE G+R ++ LG RRA+AV + +A+G++ +
Sbjct: 70 SDALATLTRQAVWLRAYPNYQLTVEGHADERGTREYNLGLGDRRAHAVKRFLIAQGVAQA 129
Query: 122 RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
R+K+ S+GKE P +G ++ A+A++RRA+ L+
Sbjct: 130 RLKIISWGKERPVAFGSNDLAWAQSRRAVTVLE 162
>gi|296328018|ref|ZP_06870553.1| outer membrane protein OmpF [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|296154974|gb|EFG95756.1| outer membrane protein OmpF [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 182
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 53/112 (47%), Gaps = 1/112 (0%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALG 102
S+ + + FD Y+++ LS L E D I+G+ D +G+ ++ L
Sbjct: 69 LILSMPELILFDFDKYAVKDGIKPSLSTLAKALGENKDIHIKIDGYTDFIGTEAYNLDLS 128
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
++RA A+ ++ +++G S + + YG++ P+ ++NRR +
Sbjct: 129 VKRARAIKDFLISKGAIGSNISIEGYGEQNPADTNQTAAGRSRNRRVEFIIS 180
>gi|238927470|ref|ZP_04659230.1| flagellar motor protein B [Selenomonas flueggei ATCC 43531]
gi|238884752|gb|EEQ48390.1| flagellar motor protein B [Selenomonas flueggei ATCC 43531]
Length = 308
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 42/128 (32%), Gaps = 6/128 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
++ +E + + F + S ++ +++ + L I GH D
Sbjct: 115 QDQVSTELTEEGLMVRLKEKALFSSGSAVLQGDAEKIVPVIAGVLASLPERVTISGHTDN 174
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGI------SASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ + + A + + + +R Y + P E+ A+
Sbjct: 175 VPISTAQYPSNWELSSARAVSLMRGVMAVQPSLNPARFSALGYSEYRPIASNDTEEGRAQ 234
Query: 146 NRRAIVFL 153
NRR VF+
Sbjct: 235 NRRVEVFI 242
>gi|85713659|ref|ZP_01044649.1| OmpA/MotB [Nitrobacter sp. Nb-311A]
gi|85699563|gb|EAQ37430.1| OmpA/MotB [Nitrobacter sp. Nb-311A]
Length = 463
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 54/133 (40%), Gaps = 4/133 (3%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDC 81
++ D + + L + +V F+T ++ P I +L L
Sbjct: 333 SVKPSAGPVDPTVCQQLLSDLLE---KRTVQFETGKATLDPDSIGLLDQLTETALRCPTA 389
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
I GH D G + + AL RRA AV ++ V G+ A+R + YG P ++
Sbjct: 390 TIEIVGHTDGDGDASFNQALSERRAQAVVDFMVKAGLPANRFRPIGYGSAQPIATNDTDE 449
Query: 142 AYAKNRRAIVFLK 154
AKNRR ++
Sbjct: 450 GKAKNRRIDFIVR 462
>gi|304395220|ref|ZP_07377104.1| OmpA/MotB domain protein [Pantoea sp. aB]
gi|304357473|gb|EFM21836.1| OmpA/MotB domain protein [Pantoea sp. aB]
Length = 157
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 25/155 (16%), Positives = 53/155 (34%), Gaps = 3/155 (1%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ I ++L + ++ ++ + + E + + D + F +
Sbjct: 1 MK-KNISLMLLTLALVGCQSKEHFSEAQIAAMKSAGFTRNSEGWGLGLSDKILFGVNESE 59
Query: 61 IRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
+ P+ + + L I+GH D G + + L L+RA AV +
Sbjct: 60 LTPSSKSNIQGMAKNLASTGIEHVRIDGHTDNYGKPDYNQQLSLKRANAVAAQWAEGASI 119
Query: 120 AS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ G P + A+NRR + +
Sbjct: 120 PRGNIVTRGLGMSAPVTSNNSAQGRAQNRRVAIVI 154
>gi|170691332|ref|ZP_02882497.1| peptidoglycan-associated lipoprotein [Burkholderia graminis C4D1M]
gi|170143537|gb|EDT11700.1| peptidoglycan-associated lipoprotein [Burkholderia graminis C4D1M]
Length = 169
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 12/163 (7%)
Query: 2 QYSTIFIILSAITMMSI-------SGIDNLDTKISSPDT----VLNESSLQEQFSSSVGD 50
+ F +L + + + + P+ +N L + S
Sbjct: 4 KLRFAFAVLMVGALAACHSGVKLDENANKGGAVSTQPNPNDVAQVNVDPLNDPNSPLAKR 63
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAV 109
S++FD SYS++ +L +L+ H LI+G+ DE G+ ++ALG +RA AV
Sbjct: 64 SIYFDFDSYSVKDDYQSLLQQHSQYLKSHPQRHVLIQGNTDERGTSEYNLALGQKRAEAV 123
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
G++ S+M+ S GKE P GHDE ++A+NRRA +
Sbjct: 124 RRSLSLMGVTDSQMEAVSLGKEKPQATGHDESSWAQNRRADLV 166
>gi|110638110|ref|YP_678319.1| OmpA family peptidoglycan-associated lipoprotein [Cytophaga
hutchinsonii ATCC 33406]
gi|110280791|gb|ABG58977.1| peptidoglycan-associated lipoprotein, OmpA family [Cytophaga
hutchinsonii ATCC 33406]
Length = 640
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRA 106
+ +VFFD ++RP +Q L L L + + GH D G+ + ++ L RA
Sbjct: 529 ILRNVFFDVDKATLRPESVQELDKLVDILRHNPNLKIELSGHTDSDGNDDHNMVLSDNRA 588
Query: 107 YAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV +Y + +G I+ +R+ YG+ P + +NRR V +
Sbjct: 589 KAVVDYLIKKGGINPNRLTWKGYGETKPIELNDTPEHKQQNRRTEVKI 636
>gi|260890151|ref|ZP_05901414.1| OmpA family protein [Leptotrichia hofstadii F0254]
gi|260860174|gb|EEX74674.1| OmpA family protein [Leptotrichia hofstadii F0254]
Length = 215
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHA 89
V + + + + + +++ FD +SY I+P L ++ + L+ + ++ GH
Sbjct: 87 GTGVDVKRTGEGEIKLTAPENITFDINSYVIKPQFRNTLDSVATVLKTYPDSTIVVSGHT 146
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G+ + L + RA +V +Y ++GIS+SR+ +G + P E A+NRR
Sbjct: 147 DTTGNDAINNPLSINRASSVESYLESQGISSSRITSRGFGSKQPIASNSTEAGRAQNRRV 206
Query: 150 IVFL 153
+ +
Sbjct: 207 EIAI 210
>gi|116622076|ref|YP_824232.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116225238|gb|ABJ83947.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076]
Length = 605
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHAD 90
+TVL ++ D V FDT +++R + L+ + L H +EG+ D
Sbjct: 466 NTVLQTRDTARGLIVNMSD-VLFDTGKFTLRAGAREKLARVAGILAGHPGLQMQVEGYTD 524
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
+GS S+ L RRA +V +Y + GI + + G+ +P + +NRR
Sbjct: 525 SVGSETSNQLLSERRATSVRDYLTSAGIPPASVTAKGLGETLPVASNDNAAGRQQNRRVE 584
Query: 151 VFLKG 155
+ + G
Sbjct: 585 LVVSG 589
>gi|312885261|ref|ZP_07744938.1| outer membrane protein A precursor [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309367068|gb|EFP94643.1| outer membrane protein A precursor [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 323
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 43/101 (42%), Gaps = 1/101 (0%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNY 112
F+ S ++P L ++ LE + + + G+ D G + L +RA AV
Sbjct: 214 FEFDSAKLKPESANELDSIVEVLEDYPQSVVEVSGYTDTSGPEKYNQKLSEQRAQAVKAV 273
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+A+GI SR+ G+ P + +NRR + +
Sbjct: 274 LIAKGIDESRITAIGKGEANPIASNETLEGRKQNRRVEINI 314
>gi|90579228|ref|ZP_01235038.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14]
gi|90440061|gb|EAS65242.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14]
Length = 326
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 50/129 (38%), Gaps = 2/129 (1%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFL 84
+ + + + + +V F S +I D L+ L++ D
Sbjct: 183 PAPVVVEEPIYVNQVTIATLEELRLTVPFAFDSSTITKGDAAKLAPFEQRLKEQDAAKIY 242
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAY 143
+ GH D G+ + + L ++RA AV + + ++R+ G+ P E+
Sbjct: 243 VVGHTDSRGAESYNQTLSVKRAEAVADALRQHLKMDSTRIIAQGRGESEPVASNQTEEGR 302
Query: 144 AKNRRAIVF 152
A+NRR +
Sbjct: 303 AQNRRVDII 311
>gi|256829593|ref|YP_003158321.1| OmpA/MotB domain-containing protein [Desulfomicrobium baculatum DSM
4028]
gi|256578769|gb|ACU89905.1| OmpA/MotB domain protein [Desulfomicrobium baculatum DSM 4028]
Length = 376
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 3/108 (2%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNSSIALGLRRAYA 108
+ FD I+P Q L++ S++ + I GH D +G+ + L RRA A
Sbjct: 264 KINFDFDKSDIKPEYHQELADFASYMRQQQSFTVVEIAGHTDSVGTDEYNQKLSERRAKA 323
Query: 109 VFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
V +Y V + + YG+ P + A+NRR + LKG
Sbjct: 324 VRDYLVNELGMDTNLFSAVGYGESKPIATNDTDAGRAENRRILAELKG 371
>gi|288575422|ref|ZP_06393704.1| OmpA family protein [Neisseria mucosa ATCC 25996]
gi|288568103|gb|EFC89663.1| OmpA family protein [Neisseria mucosa ATCC 25996]
Length = 190
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+T + Q + ++V F T S ++ L+ ++ D I GH D
Sbjct: 54 NTNIEVERQGNQIKLVMPENVTFATGSAALSDHARNALATASETLVQYPDTTLTINGHTD 113
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G+ + L RA AV +Y +RG++ SR+ YG P + A+NRR
Sbjct: 114 NTGNDAINEPLSRNRALAVADYLQSRGVNGSRLTTAGYGSRHPIASNATVEGRAQNRRVE 173
Query: 151 VFL 153
+ +
Sbjct: 174 ILI 176
>gi|86146494|ref|ZP_01064817.1| Peptidoglycan-associated lipoprotein [Vibrio sp. MED222]
gi|218709111|ref|YP_002416732.1| peptidoglycan-associated lipoprotein [Vibrio splendidus LGP32]
gi|85835757|gb|EAQ53892.1| Peptidoglycan-associated lipoprotein [Vibrio sp. MED222]
gi|218322130|emb|CAV18244.1| Peptidoglycan-associated lipoprotein precursor [Vibrio splendidus
LGP32]
Length = 180
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 27/179 (15%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDTVLNESSLQ--------------- 41
MQ + + I L + + + S D + S ++ S +
Sbjct: 1 MQLNKVLKGLMIALPVMAVTACSSTDEATSATSGTESNQTTSGSEGNVDTTVVTPIDANG 60
Query: 42 -------EQFSSSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELG 93
++ + +++F + +I ++L+ + ++ D + +EGHADE G
Sbjct: 61 QLSEQELKEQALRETQTIYFAFDNSTIAGDYEEMLAAHAAYLVKNVDMNVTVEGHADERG 120
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ +IALG RRA AV Y A G+ A ++ + SYG+E P + G ED YAKNRRA++
Sbjct: 121 TPEYNIALGERRAQAVAKYLQALGVQADQISIVSYGEEKPLLLGQSEDVYAKNRRAVLV 179
>gi|325526573|gb|EGD04123.1| OmpA/MotB domain-containing protein [Burkholderia sp. TJI49]
Length = 112
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFN 111
FD +++PA ++ L + + G+ D +GS + + AL LRRA +V +
Sbjct: 8 LFDFDKANLKPAGVRALDEVIDNARGKRFRLVEVAGYTDSIGSDSYNNALSLRRAKSVAD 67
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
Y A G+ A RM V +GK P + A+NRR + L+
Sbjct: 68 YLRAHGLDAERMAVDGFGKSNPVASDATDAGRAQNRRVEIVLE 110
>gi|82702444|ref|YP_412010.1| flagellar motor protein MotD [Nitrosospira multiformis ATCC 25196]
gi|82410509|gb|ABB74618.1| OmpA/MotB [Nitrosospira multiformis ATCC 25196]
Length = 288
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 47/126 (37%), Gaps = 4/126 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ + + + V F + +VL + L+ +D +EGH D
Sbjct: 124 NGQVRVIPSSRGLAVEINAKVLFAPGQAVLEQNSARVLEAVAQVLKNNDYPIQVEGHTDS 183
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+ S+ L RA +V + G+ A+R+ YG+ P ED +NR
Sbjct: 184 IPIVTDKFPSNWELSAVRASSVVRLLIGSGVEAARLTAVGYGENRPVDSNDTEDGRTRNR 243
Query: 148 RAIVFL 153
R + +
Sbjct: 244 RVTIMI 249
>gi|126173976|ref|YP_001050125.1| OmpA domain-containing protein [Shewanella baltica OS155]
gi|153000268|ref|YP_001365949.1| peptidoglycan-associated lipoprotein [Shewanella baltica OS185]
gi|160874901|ref|YP_001554217.1| peptidoglycan-associated lipoprotein [Shewanella baltica OS195]
gi|304409845|ref|ZP_07391465.1| peptidoglycan-associated lipoprotein [Shewanella baltica OS183]
gi|307304201|ref|ZP_07583954.1| peptidoglycan-associated lipoprotein [Shewanella baltica BA175]
gi|125997181|gb|ABN61256.1| OmpA domain protein [Shewanella baltica OS155]
gi|151364886|gb|ABS07886.1| Peptidoglycan-associated lipoprotein [Shewanella baltica OS185]
gi|160860423|gb|ABX48957.1| peptidoglycan-associated lipoprotein [Shewanella baltica OS195]
gi|304352363|gb|EFM16761.1| peptidoglycan-associated lipoprotein [Shewanella baltica OS183]
gi|306913099|gb|EFN43522.1| peptidoglycan-associated lipoprotein [Shewanella baltica BA175]
gi|315267138|gb|ADT93991.1| peptidoglycan-associated lipoprotein [Shewanella baltica OS678]
Length = 178
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 25/177 (14%)
Query: 1 MQYSTIF-IILSAITMMSISGIDNLDTKISSPDTVLNESSLQ------------------ 41
M + + +L A+ +M++S + + N S +
Sbjct: 1 MDLNKLLKAMLVALPIMALSACSSTSESETDAMGSTNGSGSELNGGGIQTGGVGAMLSAE 60
Query: 42 EQFSSSVGD-----SVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
EQ + D ++FD ++ +L G++ +E LIEGHADE G+
Sbjct: 61 EQQRQQLEDLRKQHIIYFDFDRSEVQTDFAAILEAHGTYLVEHPSVRVLIEGHADERGTP 120
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+IALG RRA AV Y G+ S+M V SYG+E P + ++ + KNRRA++
Sbjct: 121 EYNIALGERRAKAVAKYLQGMGVQPSQMSVVSYGEEKPLDFSRTDEGFGKNRRAVLV 177
>gi|94264078|ref|ZP_01287877.1| OmpA/MotB [delta proteobacterium MLMS-1]
gi|93455494|gb|EAT05684.1| OmpA/MotB [delta proteobacterium MLMS-1]
Length = 235
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 48/131 (36%), Gaps = 6/131 (4%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHA 89
++ +E+ + D+V FDT I+ ++L LG + ++EGH
Sbjct: 80 QEAGLVTVEDQEEEILVRIQDAVAFDTGRAEIKGDFRELLDQLGEIIYDSQSTMVVEGHT 139
Query: 90 DELG-----SRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAY 143
D + S+ L RA AV Y + R+ ++ P +
Sbjct: 140 DNVPLRPGAPFASNWELSSARAVAVVEYLINEHNIPRDRLAAVAHADGKPVATNDTAEGR 199
Query: 144 AKNRRAIVFLK 154
A NRR ++
Sbjct: 200 AANRRVEFRIR 210
>gi|466690|gb|AAB18529.1| unnamed protein product [Escherichia coli str. K-12 substr. MG1655]
Length = 219
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 64/135 (47%), Gaps = 1/135 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
+ + + T ++ + + ++ ++V FD+SS +++PA L+ + L+++
Sbjct: 83 VQEANVRDKMRGTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYP 142
Query: 81 CD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ G+ D G + ++ L +RA +V + + +G+ ASR++ G P
Sbjct: 143 KTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNST 202
Query: 140 EDAYAKNRRAIVFLK 154
+ A+NRR + L
Sbjct: 203 AEGKAQNRRVEITLS 217
>gi|319796494|ref|YP_004158134.1| ompa/motb domain protein [Variovorax paradoxus EPS]
gi|315598957|gb|ADU40023.1| OmpA/MotB domain protein [Variovorax paradoxus EPS]
Length = 188
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 56/137 (40%), Gaps = 1/137 (0%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
++ + + V+ E + Q + + + FDT +++ QVL + L+
Sbjct: 48 LAALKTDLEASTKGTGVVIEQTADNQLHVVIPNELSFDTGRANVKRNLAQVLDKVAEGLK 107
Query: 78 K-HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ GH D GS + L + RA +V N+ V RG+S + + G P
Sbjct: 108 SATAASVRVVGHTDATGSEEGNERLSVSRADSVRNHLVGRGVSTTAITTDGRGSREPLAD 167
Query: 137 GHDEDAYAKNRRAIVFL 153
A+NRR +F+
Sbjct: 168 NGTAAGRAQNRRVEIFV 184
>gi|300950898|ref|ZP_07164778.1| OmpA family protein [Escherichia coli MS 116-1]
gi|300449827|gb|EFK13447.1| OmpA family protein [Escherichia coli MS 116-1]
Length = 217
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD+SS +++PA L+ + L+++ + G+ D
Sbjct: 94 GTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + ++ L +RA +V + + +G+ ASR++ G P + A+NRR
Sbjct: 154 STGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVE 213
Query: 151 VFLK 154
+ L
Sbjct: 214 ITLS 217
>gi|256840118|ref|ZP_05545627.1| outer membrane protein [Parabacteroides sp. D13]
gi|256739048|gb|EEU52373.1| outer membrane protein [Parabacteroides sp. D13]
Length = 226
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 52/129 (40%), Gaps = 1/129 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFL 84
DT + + E + + F T+S ++ A L N + L+ D D
Sbjct: 82 EATLPEDTKIESVNNGEALKVTFDSGILFATNSSTLSDASKSALRNFATSLKANPDTDIR 141
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
I G D G + + L +RA +V++Y + +G+S RM G P + +
Sbjct: 142 IIGFTDNTGKVDYNQTLSEKRAKSVYDYLMMQGVSTDRMVYEGKGIHDPVASNDTPEGRS 201
Query: 145 KNRRAIVFL 153
NRR + +
Sbjct: 202 LNRRVEIVI 210
>gi|91215422|ref|ZP_01252393.1| outer membrane protein, OmpA/MotB family [Psychroflexus torquis
ATCC 700755]
gi|91186374|gb|EAS72746.1| outer membrane protein, OmpA/MotB family [Psychroflexus torquis
ATCC 700755]
Length = 457
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 57/130 (43%), Gaps = 1/130 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFL 84
+ + + ++ + ++ F+T +I + L+ + E + F
Sbjct: 327 AGTEANNGCPEVTEEIQKELNEYAKTINFETGKTTISKNSEEALTAIIAILDEYPNAKFT 386
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+EGH D +GS ++ +L RA +V +Y V G+ R+ +G++ P + A
Sbjct: 387 VEGHTDSVGSAKNNESLSEARALSVKSYLVKNGVDEFRLSSAGFGEQKPVESNDTKAGRA 446
Query: 145 KNRRAIVFLK 154
+NRR + LK
Sbjct: 447 ENRRVEINLK 456
>gi|301059327|ref|ZP_07200254.1| OmpA family protein [delta proteobacterium NaphS2]
gi|300446556|gb|EFK10394.1| OmpA family protein [delta proteobacterium NaphS2]
Length = 434
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRA 106
V + FD + +++PA + V++ + + H D + IEGH D G + + L RA
Sbjct: 327 VTRGILFDVNKATLKPASMGVINEIAKMMRAHEDINLRIEGHTDSDGEKTFNQKLSEERA 386
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
AV N V G+ +SR+K +G+ P + A NRR
Sbjct: 387 EAVKNALVDAGVDSSRLKTKGFGESKPVSDNTTAEGKANNRRVEFV 432
>gi|288550313|ref|ZP_05969946.2| membrane protein OmpA-family [Enterobacter cancerogenus ATCC 35316]
gi|288315417|gb|EFC54355.1| membrane protein OmpA-family [Enterobacter cancerogenus ATCC 35316]
Length = 563
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 50/121 (41%), Gaps = 2/121 (1%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELG 93
+ + +Q + + FDT ++++P ++L N L K ++ GH D G
Sbjct: 414 IIKQIVQGPQTIRLDSMSLFDTGRWALKPGSTKLLVNSLVGIKAKPGWLIVVAGHTDSTG 473
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
S+ L L+RA +V ++ G V YG+ P + A NRR +
Sbjct: 474 DDKSNQVLSLKRAESVRDWMRDTGDVPESCFAVQGYGESRPVATNDTPEGRALNRRVEIS 533
Query: 153 L 153
L
Sbjct: 534 L 534
>gi|169795057|ref|YP_001712850.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter
baumannii AYE]
gi|260556541|ref|ZP_05828759.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii ATCC
19606]
gi|332851095|ref|ZP_08433204.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii
6013150]
gi|332869632|ref|ZP_08438843.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii
6013113]
gi|332875985|ref|ZP_08443771.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii
6014059]
gi|169147984|emb|CAM85847.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter
baumannii AYE]
gi|260409800|gb|EEX03100.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii ATCC
19606]
gi|322509070|gb|ADX04524.1| pal [Acinetobacter baumannii 1656-2]
gi|323519051|gb|ADX93432.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter
baumannii TCDC-AB0715]
gi|332730259|gb|EGJ61584.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii
6013150]
gi|332732679|gb|EGJ63911.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii
6013113]
gi|332735851|gb|EGJ66892.1| peptidoglycan-associated lipoprotein [Acinetobacter baumannii
6014059]
Length = 191
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 77/179 (43%), Gaps = 28/179 (15%)
Query: 1 MQYSTI----FIILSAITMMSISGI--------------DNLDTKISSPDTVLNESS--- 39
M +I F +LSA +M+ ++T S D LN +
Sbjct: 3 MMMKSIKYLAFPLLSAALVMTGCASRKPATTATTGTTNPSTVNTTGLSEDAALNAQNLAG 62
Query: 40 ------LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADEL 92
+ ++ V FD S + D Q L + + + + GH DE
Sbjct: 63 ASSKGVTEANKAALAKRVVHFDYDSSDLSTEDYQTLQAHAQFLMANANSKVALTGHTDER 122
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
G+R ++ALG RRA AV NY + G++ +++ SYGKE P GHDE A+ +NRR +
Sbjct: 123 GTREYNMALGERRAKAVQNYLITSGVNPQQLEAVSYGKEAPVNPGHDESAWKENRRVEI 181
>gi|260557560|ref|ZP_05829775.1| OmpA/MotB [Acinetobacter baumannii ATCC 19606]
gi|260409186|gb|EEX02489.1| OmpA/MotB [Acinetobacter baumannii ATCC 19606]
Length = 471
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 59/148 (39%), Gaps = 6/148 (4%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSV-----GDSVFFDTSSYSIRPADI 66
+ + ++ +S+ T L +++ + F + S I +
Sbjct: 322 VVASAPETAEQSVSNSLSASQTALTAIDPNNVDVNALVKALNLQIINFASGSSDIPADNK 381
Query: 67 QVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
+L + + + GH D G+ ++ AL RRA AV +Y V++G+ AS++
Sbjct: 382 AILDQAATLLNKVSGVKLDVGGHTDSTGNAAANKALSQRRAQAVVDYLVSKGVDASKLVA 441
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+G E P E+ KNRR +
Sbjct: 442 KGHGSEQPVADNTTEEGRFKNRRIEFSV 469
>gi|261856274|ref|YP_003263557.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
gi|261836743|gb|ACX96510.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
Length = 323
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 58/140 (41%), Gaps = 4/140 (2%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+ D + ++ S ++ + + V D++ F + + ++ A +Q+L L L+
Sbjct: 159 ASQDQARALFAGLGKDVDVSVVKGRINLRVKDNILFSSGNSALSAAGMQLLKRLADRLKA 218
Query: 79 HDCDFLIEGHADELGSR----NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
D ++GH D + S+ L RA AV +A G+ +R+ + P
Sbjct: 219 GDYPIAVQGHTDNVPIHTLQFPSNWELSAARAAAVVQELIASGVQPNRLSAIGFADTHPI 278
Query: 135 VYGHDEDAYAKNRRAIVFLK 154
A+NRR + L+
Sbjct: 279 TSNDTASGRAENRRVDLELQ 298
>gi|149194324|ref|ZP_01871421.1| Thrombospondin type 3 repeat:OmpA/MotB [Caminibacter mediatlanticus
TB-2]
gi|149135499|gb|EDM23978.1| Thrombospondin type 3 repeat:OmpA/MotB [Caminibacter mediatlanticus
TB-2]
Length = 209
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 53/135 (39%), Gaps = 2/135 (1%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-K 78
G D K P+T N + + FD + ++++ + + L+
Sbjct: 67 GDGVPDIKDKCPNTPKNLTVDHNGCPIITTLRINFDFNKWNVKKIYYPQIKKVAEILKAN 126
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYG 137
+ + GH D +GS ++ L +RA AV V I+ +R+ YG++ P V
Sbjct: 127 PNLKIEVAGHTDNIGSAKYNLKLSQKRAEAVKKILVNVYHINPNRIVARGYGEKYPLVPN 186
Query: 138 HDEDAYAKNRRAIVF 152
A NRR +
Sbjct: 187 TTSTNRALNRRVEII 201
>gi|86143638|ref|ZP_01062014.1| Thrombospondin type 3 repeat:OmpA/MotB [Leeuwenhoekiella blandensis
MED217]
gi|85829681|gb|EAQ48143.1| Thrombospondin type 3 repeat:OmpA/MotB [Leeuwenhoekiella blandensis
MED217]
Length = 461
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 62/131 (47%), Gaps = 2/131 (1%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFL 84
+S + + + + + FDT +IR + + L+ + S ++++ F
Sbjct: 331 AGPASNNGCPEVDASVLEVLNGEAGRILFDTDKATIRTSSYETLARIASIVKEYPTASFE 390
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAY 143
+EGHAD S ++ L RRA +V +Y ++ ++AS++ + +YG+E P
Sbjct: 391 VEGHADSRASNAYNMDLSERRAQSVVDYLTSKEGVNASQLSIKAYGEEQPIAPNTTAAGM 450
Query: 144 AKNRRAIVFLK 154
NRR + L+
Sbjct: 451 QLNRRVKLTLE 461
>gi|145219968|ref|YP_001130677.1| OmpA/MotB domain-containing protein [Prosthecochloris vibrioformis
DSM 265]
gi|145206132|gb|ABP37175.1| OmpA/MotB domain protein [Chlorobium phaeovibrioides DSM 265]
Length = 152
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 44/156 (28%), Positives = 68/156 (43%), Gaps = 10/156 (6%)
Query: 1 MQYSTIFI---ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS 57
M+ S + + A+ ++ G + ++ VF+D
Sbjct: 1 MKRSMFLLKGLCVPAMLVLGACGC------RTDVVAPEPGQPAPAPAAAPALGDVFYDFD 54
Query: 58 SYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
SIR + LS +W+++ +IEGH DE G+ ++ALG RRA Y V
Sbjct: 55 QASIRMDAAEQLSKNAAWMQEKSSKRVVIEGHCDERGTSEYNMALGERRASMAKEYMVNL 114
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
G+ RM SYG+E P G +E+A+A NRRA
Sbjct: 115 GVQPERMTTVSYGEERPFAAGSNEEAWALNRRAHFV 150
>gi|254438169|ref|ZP_05051663.1| OmpA family protein [Octadecabacter antarcticus 307]
gi|198253615|gb|EDY77929.1| OmpA family protein [Octadecabacter antarcticus 307]
Length = 220
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 51/126 (40%), Gaps = 1/126 (0%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG-SWLEKHDCDFLIEG 87
+ + Q ++ + FDT S ++ L+ L S + + G
Sbjct: 91 QEMGSSAQIVNTGSQLIVTLPQDILFDTGSSALTGGLRNDLNTLAGSMNRFPNSTVNVIG 150
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
H D GS + L RRA AV + G++ +R++ G++ P +E+ +NR
Sbjct: 151 HTDWDGSAAFNQDLSARRAQAVSAVLIQSGVAPNRIRSIGRGEDAPIATNLNEEGKRQNR 210
Query: 148 RAIVFL 153
R + +
Sbjct: 211 RVEITI 216
>gi|219870352|ref|YP_002474727.1| 18K peptidoglycan-associated outer membrane lipoprotein PalA
[Haemophilus parasuis SH0165]
gi|219690556|gb|ACL31779.1| 18K peptidoglycan-associated outer membrane lipoprotein, precursor
PalA [Haemophilus parasuis SH0165]
Length = 153
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 4/153 (2%)
Query: 1 MQY--STIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSS 58
M+ + I A + + S ++ + +S + + Q + ++V+FD S
Sbjct: 1 MKKLAKVLMIAAPAFVLAACSSSNDNASANASANAGQTFGGMSVQDLQTRYNTVYFDFDS 60
Query: 59 YSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI 118
Y+++ D Q+L +L + GHADE G+ +IALG RRA AV ++ +
Sbjct: 61 YTLKAEDQQLLDAHAQYLVASKGKVTVAGHADERGTPEYNIALGQRRADAVKDFLATK-- 118
Query: 119 SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
AS + SYG+E P+V GH E Y+KNRRA++
Sbjct: 119 GASNVATVSYGEEKPAVLGHSEADYSKNRRAVL 151
>gi|171316577|ref|ZP_02905793.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
gi|171098305|gb|EDT43111.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
Length = 316
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++ F+T S ++ P Q+L + + + + I GH D G+R S+IAL RA
Sbjct: 209 NRTIEFETGSATLTPQGRQILDQMAAALSKLQNRTVDIIGHTDNSGNRTSNIALSQARAD 268
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV Y + + I +M T G + P + A+NRR +
Sbjct: 269 AVKGYLITKSIPPQQMTTTGVGPDQPIAPNDTAEGRARNRRIEFRV 314
>gi|153952154|ref|YP_001397367.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
subsp. doylei 269.97]
gi|152939600|gb|ABS44341.1| peptidoglycan-associated lipoprotein Omp18 [Campylobacter jejuni
subsp. doylei 269.97]
Length = 165
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/164 (24%), Positives = 66/164 (40%), Gaps = 10/164 (6%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG--------DSV 52
M+ I + ++S + S + + + V
Sbjct: 1 MKKILFTSIATLAVVISGCSTKSTSVSGDSSVDSNRGLGGSDGWDIDSKISQLNDTLNKV 60
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHD--CDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+FD ++IRP V+S + +EG+ DE G+ + ALGL+RA AV
Sbjct: 61 YFDFDKFNIRPDMQNVVSTNANIFNTEVSGVSITVEGNCDEWGTDEYNQALGLKRAKAVK 120
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+A+G++A R+ V SYG+ P + A+NRRA L
Sbjct: 121 EALIAKGVNADRIAVKSYGETNPVCTEKTKACDAQNRRAEFKLS 164
>gi|19703678|ref|NP_603240.1| Outer membrane porin F [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|19713798|gb|AAL94539.1| Outer membrane porin F [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
Length = 172
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 67/170 (39%), Gaps = 26/170 (15%)
Query: 11 SAITMMSISGIDNLD---------TKISSPDTVLNESSLQE----------------QFS 45
A+ + + S K + DT N+ L++
Sbjct: 1 MALLVTACSSTKTTKKTNVGVDSTNKYAVEDTEANKKPLEDIIVFNEEGVTIRREGNNLI 60
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLR 104
S+ + + FD Y+++ LS L E D I+G+ D +G+ ++ L ++
Sbjct: 61 LSMPELILFDFDKYAVKDGIKPSLSTLAKALGENKDIHIKIDGYTDFIGTEAYNLDLSVK 120
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RA A+ ++ +++G S + + YG++ P+ ++NRR +
Sbjct: 121 RARAIKDFLISKGAIGSNISIEGYGEQNPADTNQTAAGRSRNRRVEFIIS 170
>gi|152985769|ref|YP_001345545.1| hypothetical protein PSPA7_0149 [Pseudomonas aeruginosa PA7]
gi|150960927|gb|ABR82952.1| hypothetical protein PSPA7_0149 [Pseudomonas aeruginosa PA7]
Length = 449
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 42/123 (34%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+ ++ ++ F ++S S+R +L + L K L+ GH+D
Sbjct: 321 VAVEDAVDRSVVTIRGDELFASASASVRDEFQPLLLRIADALRKVKGQVLVTGHSDNRPI 380
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
S+ L RA V + A A R P + A+NRR
Sbjct: 381 ATLRYPSNWKLSQARAQEVADLLGATTGEAGRFTAEGRSDTEPVATNASAEGRARNRRVE 440
Query: 151 VFL 153
+ +
Sbjct: 441 ITV 443
>gi|325300740|ref|YP_004260656.1| OmpA/MotB domain-containing protein [Bacteroides salanitronis DSM
18170]
gi|324320293|gb|ADY38183.1| OmpA/MotB domain protein [Bacteroides salanitronis DSM 18170]
Length = 209
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 1/135 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHD 80
+ L T ++E++ ++ F +++ + + F S+ + +L +G E +
Sbjct: 73 NKLKNIPGLVVTTIDETNGKKIFKATMQNEILFKFDSHELNKNAKSILDEMIGIINEIPN 132
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ GH D +G + +I L RA AV NY GI + G + P E
Sbjct: 133 TKIKVIGHTDNIGEKGYNILLSQNRAAAVGNYLRNAGIETKNITEEGKGFDEPVSSNKTE 192
Query: 141 DAYAKNRRAIVFLKG 155
AKNRR +FL
Sbjct: 193 AGRAKNRRVEIFLSN 207
>gi|197336986|ref|YP_002157822.1| outer membrane protein [Vibrio fischeri MJ11]
gi|197314238|gb|ACH63687.1| outer membrane protein [Vibrio fischeri MJ11]
Length = 255
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/130 (25%), Positives = 61/130 (46%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
D++D + + + +++ +S ++V V+F+ ++ VL L S + + D
Sbjct: 123 DSIDVESTCSEFLISNTSDALVNKNAVLARVYFNFDKSTLTKRSEYVLDKLYSKMGEKDI 182
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
+EGH D GS + LGL+RA V+ Y V +G ++ V + G+ P +
Sbjct: 183 KLKVEGHTDSKGSSTYNYDLGLKRANIVYQYLVQQGAEPNQFSVVTKGEREPIKTNKTAN 242
Query: 142 AYAKNRRAIV 151
KNRR +
Sbjct: 243 GREKNRRVEI 252
>gi|254411320|ref|ZP_05025097.1| OmpA family protein [Microcoleus chthonoplastes PCC 7420]
gi|196181821|gb|EDX76808.1| OmpA family protein [Microcoleus chthonoplastes PCC 7420]
Length = 293
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 47/137 (34%), Gaps = 1/137 (0%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLE 77
+ + + + + + ++ V F+ ++ +RP +L +
Sbjct: 157 ATSNGNNPNATVMAASSDSFGSSQTLKVTLPSDVLFEGNNSLLRPEAGLILDKIIADLRN 216
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
I H D G + L RRA AV YF R V YG+ P V
Sbjct: 217 YPSSTIRIAAHTDSQGEPEDNRELSFRRAKAVEQYFARALGDDYRWLVVGYGEIRPLVAN 276
Query: 138 HDEDAYAKNRRAIVFLK 154
+ +NRR + ++
Sbjct: 277 DTDANQQRNRRIEISVE 293
>gi|59713413|ref|YP_206188.1| outer membrane protein [Vibrio fischeri ES114]
gi|59481661|gb|AAW87300.1| outer membrane protein [Vibrio fischeri ES114]
Length = 253
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/130 (25%), Positives = 61/130 (46%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
D++D + + + +++ +S ++V V+F+ ++ VL L S + + D
Sbjct: 121 DSIDVESTCSEFLISNTSDALVNKNAVLARVYFNFDKSTLTKRSEYVLDKLYSKMGEKDI 180
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
+EGH D GS + LGL+RA V+ Y V +G ++ V + G+ P +
Sbjct: 181 KLKVEGHTDSKGSSTYNYDLGLKRANIVYQYLVQQGAEPNQFSVVTKGEREPIKTNKTAN 240
Query: 142 AYAKNRRAIV 151
KNRR +
Sbjct: 241 GREKNRRVEI 250
>gi|322418405|ref|YP_004197628.1| OmpA/MotB domain-containing protein [Geobacter sp. M18]
gi|320124792|gb|ADW12352.1| OmpA/MotB domain protein [Geobacter sp. M18]
Length = 228
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 52/133 (39%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
D + ++ ++ + FD +++P LS L
Sbjct: 83 DRQAAALKKSMPQAEVIRDGDKVYVALPSGILFDVGKDTLKPEAKDALSKAVPTLRDSQT 142
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
+IEGH D GS + L RRA V ++ +++G+ S+M YG P+V E
Sbjct: 143 TIVIEGHTDSTGSNAVNQPLSERRAGRVRDFLISQGVPGSKMAAVGYGSTRPAVANDTEA 202
Query: 142 AYAKNRRAIVFLK 154
A NRR + L
Sbjct: 203 NRALNRRVQIELS 215
>gi|169633170|ref|YP_001706906.1| hypothetical protein ABSDF1479 [Acinetobacter baumannii SDF]
gi|169151962|emb|CAP00823.1| conserved hypothetical protein; putative bacterial outer membrane
domain [Acinetobacter baumannii]
Length = 471
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 59/148 (39%), Gaps = 6/148 (4%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSV-----GDSVFFDTSSYSIRPADI 66
+ + ++ +S+ T L +++ + F + S I +
Sbjct: 322 VVATAPETAEQSVSNSLSASQTALTAIDPNNVDENALVKALNLQIINFASGSSDIPADNK 381
Query: 67 QVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
+L + + + GH D G+ ++ AL RRA AV +Y V++G+ AS++
Sbjct: 382 AILDQAATLLNKVSGVKLDVGGHTDSTGNAAANKALSQRRAQAVVDYLVSKGVDASKLVA 441
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+G E P E+ KNRR +
Sbjct: 442 KGHGSEQPVADNTTEEGRFKNRRIEFSV 469
>gi|124516288|gb|EAY57796.1| putative flagellar motor protein (OmpA/MotB) [Leptospirillum
rubarum]
Length = 261
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 46/135 (34%), Gaps = 5/135 (3%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI 85
+ SS + +E + F + +R + VL + + L + + + +
Sbjct: 95 VQKSSEKGDMKVVQTKEGIVLRIQSRFLFASGHARVRRKAVPVLRKIAALLARTNHEIRV 154
Query: 86 EGHADELGS----RNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDE 140
G+ D ++ AL RA V + I RM +GK P
Sbjct: 155 HGYTDNQPIRTSRYPNNWALSTMRAVNVLTRLLEYGSIDPGRMGAAGFGKFRPIASNLTP 214
Query: 141 DAYAKNRRAIVFLKG 155
+ KNRR + +
Sbjct: 215 EGREKNRRVEILIMN 229
>gi|115375599|ref|ZP_01462856.1| OmpA/MotB [Stigmatella aurantiaca DW4/3-1]
gi|310823174|ref|YP_003955532.1| OmpA domain-containing protein [Stigmatella aurantiaca DW4/3-1]
gi|115367375|gb|EAU66353.1| OmpA/MotB [Stigmatella aurantiaca DW4/3-1]
gi|309396246|gb|ADO73705.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 468
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 53/143 (37%), Gaps = 10/143 (6%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS-------SSVGDSVFFDTSSYSI-RPADIQVLSNL 72
+D LD P + ++ + + F T S I + +L ++
Sbjct: 323 VDRLDACPEEPGVPEEKGCAKKYKMVVVKKDRIEIKKQINFGTGSAKIVGAQSLAILKDI 382
Query: 73 GSWLEKHDC--DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
L IEGH D G+ S++ L +RA AV + GI R++ YG+
Sbjct: 383 ALVLVDMPIIKKVRIEGHTDSQGADASNLRLSQKRADAVMAQLIKLGIDPGRLEAVGYGE 442
Query: 131 EMPSVYGHDEDAYAKNRRAIVFL 153
P + A+NRR +
Sbjct: 443 TKPIASNATKAGRAENRRTEFNI 465
>gi|37521397|ref|NP_924774.1| outer membrane protein [Gloeobacter violaceus PCC 7421]
gi|35212394|dbj|BAC89769.1| glr1828 [Gloeobacter violaceus PCC 7421]
Length = 227
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/155 (20%), Positives = 56/155 (36%), Gaps = 16/155 (10%)
Query: 17 SISGIDNLDTKISSPDTVL--------NESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
S G T+I++ +T + N ++ + + FD +RP+
Sbjct: 69 SAGGSATRSTQIAASETQVVNQILSDFNAQRTASGIVVTLPEDILFDFDKADLRPSAQVA 128
Query: 69 LSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVT 126
L + + + + I GH D G+ + +L RRA AV +Y + R+
Sbjct: 129 LQKMAQVINFYKNAPIEISGHTDSKGADGYNRSLSERRAEAVRSYLANNFSVTTGRLTAR 188
Query: 127 SYGKEMPSVYG------HDEDAYAKNRRAIVFLKG 155
G+ P D KNRR + +K
Sbjct: 189 GLGEGKPVAPNTKPDGSDDPAGRQKNRRVEILIKN 223
>gi|298529977|ref|ZP_07017379.1| peptidoglycan-associated lipoprotein [Desulfonatronospira
thiodismutans ASO3-1]
gi|298509351|gb|EFI33255.1| peptidoglycan-associated lipoprotein [Desulfonatronospira
thiodismutans ASO3-1]
Length = 200
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/121 (32%), Positives = 65/121 (53%), Gaps = 1/121 (0%)
Query: 34 VLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADEL 92
V E+ +Q+ + + F SY + L + +++ D +IEGH DE
Sbjct: 78 VDAEARIQDAMEEITANRIHFAFDSYELDADARSALQKISEHMKRFDELRLVIEGHTDER 137
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
G+ ++ALG RRA A + + V G+S+ R+++ SYG+E P V +E A+A+NRRA
Sbjct: 138 GTAEYNLALGERRARAAYEFLVLLGVSSDRLQIISYGEENPLVDESNESAWAQNRRAEFK 197
Query: 153 L 153
+
Sbjct: 198 V 198
>gi|167851058|ref|ZP_02476566.1| hypothetical protein BpseB_37821 [Burkholderia pseudomallei B7210]
Length = 415
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 4/132 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ +++ ++ + F + S S+ + VL+ + L + + +
Sbjct: 269 EPEIAAGLVSVRDEADRSVIVLRGDGLFGSGSTSVIDRYMPVLTRVADALNQVQGNVRVS 328
Query: 87 GHADELGSRN----SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
G+ D+ S+ L RA AV + AR R+ G P
Sbjct: 329 GYTDDTPVHTARFASNWDLSRERAQAVRSLIAARLDRPERITAEGRGTLDPVAPNDSPAN 388
Query: 143 YAKNRRAIVFLK 154
A+NRR + L
Sbjct: 389 RARNRRVEITLM 400
>gi|313677086|ref|YP_004055082.1| membrane protein [Marivirga tractuosa DSM 4126]
gi|312943784|gb|ADR22974.1| putative membrane protein [Marivirga tractuosa DSM 4126]
Length = 504
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 56/137 (40%), Gaps = 1/137 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
DN + ++S+ FS + + + + ++ L ++ +E +
Sbjct: 367 DNFQDQPVKVIEKEYQTSVSRDFSFELRKNFNYGFNETNLNDEAKSYLDDIAVMMEANPA 426
Query: 82 -DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ GH D +G+ +++ + RA V +Y + GI+A R+ G P + E
Sbjct: 427 LKLKVTGHTDNIGTEDANQKISEERAKGVRDYLESIGIAAERLSYEGKGATAPLYKNNTE 486
Query: 141 DAYAKNRRAIVFLKGCR 157
+ AKNRR + +
Sbjct: 487 ENRAKNRRVEFLIYAEK 503
>gi|238896049|ref|YP_002920785.1| putative outer membrane lipoprotein [Klebsiella pneumoniae
NTUH-K2044]
gi|262043847|ref|ZP_06016937.1| OmpA family protein [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|238548367|dbj|BAH64718.1| iron-regulated membrane protein [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|259038817|gb|EEW39998.1| OmpA family protein [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
Length = 160
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/158 (20%), Positives = 58/158 (36%), Gaps = 4/158 (2%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLD--TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSS 58
M L A +++ + + + +S + DS+ FD +
Sbjct: 1 MIRKYFVPALMAAALLTGCQAPQGKFTPEQVAAMKSYGFTESNGDWSLGLSDSILFDKND 60
Query: 59 YSIRPADIQVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARG 117
Y +RP Q ++ + S L +EGH D G + + AL L+RA +V + +
Sbjct: 61 YRLRPDSRQQITTMASRLAATGITHSRLEGHTDNYGEDSYNEALSLKRANSVADAWAEGA 120
Query: 118 ISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ GK+ P A+NRR V +
Sbjct: 121 HVPRSNLVTRGLGKKYPIASNDTAAGRAENRRVTVVIS 158
>gi|256830500|ref|YP_003159228.1| OmpA/MotB domain-containing protein [Desulfomicrobium baculatum DSM
4028]
gi|256579676|gb|ACU90812.1| OmpA/MotB domain protein [Desulfomicrobium baculatum DSM 4028]
Length = 242
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 49/117 (41%), Gaps = 1/117 (0%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS-RNSSI 99
E + + D + F ++ ++LS +L + G+ D + + + +
Sbjct: 121 PEGIALVLSDGMLFGVGESALTEDSRKLLSEFAQFLASVTMPVNVAGYTDNIPAGQKDNY 180
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
L RA +V +F+ +G R V++YG+ P + AKNRR + LK
Sbjct: 181 MLSSERAMSVLTFFLQQGFDPRRFSVSAYGEAFPLGDNATPEGRAKNRRVEILLKTT 237
>gi|197117764|ref|YP_002138191.1| OmpA family outer membrane protein [Geobacter bemidjiensis Bem]
gi|197087124|gb|ACH38395.1| OmpA family outer membrane protein [Geobacter bemidjiensis Bem]
Length = 468
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/134 (26%), Positives = 57/134 (42%), Gaps = 2/134 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ P V + + + FD IRP + ++ +G++++K+
Sbjct: 205 AAVTPAPEPPLEVPAAEPTPDHYKYCITLHGEFDIDKAIIRPEYKEEIAQVGNFMKKYPT 264
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHD 139
+IEGH D +GS N + L RRA AV NY V + I SR+ YG P
Sbjct: 265 TTAVIEGHTDNVGSYNHNQDLSQRRAEAVVNYLVEQYGIERSRLSAKGYGFTRPIADNAT 324
Query: 140 EDAYAKNRRAIVFL 153
++ KNRR +
Sbjct: 325 DEGKQKNRRIEAII 338
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVA 115
++ ++ + ++++++ +IEGH D GS ++ L +RA V NY V
Sbjct: 364 GKADVKSQYRNEIAKVADYMKRYNTTTAVIEGHTDNTGSPEKNMKLSQQRAQNVVNYLVD 423
Query: 116 RG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
I SR+ YG Y + + KNRR +
Sbjct: 424 NFGIERSRLSAKGYGATRRISYNNTPEGRQKNRRINAVI 462
>gi|89056405|ref|YP_511856.1| OmpA/MotB [Jannaschia sp. CCS1]
gi|88865954|gb|ABD56831.1| OmpA/MotB [Jannaschia sp. CCS1]
Length = 658
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/144 (27%), Positives = 59/144 (40%), Gaps = 4/144 (2%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS 70
AI M+++ + LD S P E+ +++ + + FD S I A +VL
Sbjct: 469 GAIFDMNVAYDEALDPVASQPTPQECEARIRDIQDET---KITFDPGSTEINRAAGEVLD 525
Query: 71 NLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
+ + I GH D G ++ L RA AV N +ARG+ S + YG
Sbjct: 526 EIAEILPDCMHVSMEIGGHTDAQGGETMNLNLSQSRANAVLNGLLARGVLVSNLAAQGYG 585
Query: 130 KEMPSVYGHDEDAYAKNRRAIVFL 153
+ P ED +NRR L
Sbjct: 586 ESQPIADNETEDGREQNRRIEFRL 609
>gi|86135195|ref|ZP_01053777.1| OmpA family protein [Polaribacter sp. MED152]
gi|85822058|gb|EAQ43205.1| OmpA family protein [Polaribacter sp. MED152]
Length = 452
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 8/143 (5%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGD-------SVFFDTSSYSIRPADIQVLSNLGS 74
D D I+ N +E + + S+ F++ + + + L +
Sbjct: 310 DKDDKCINEVGPASNNGCPEEVITKEATEVINFTAKSILFNSGRATFKAGVTKQLDAIVD 369
Query: 75 WL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
+ + F I GH D GS + ++ L +RA AV +Y V G+ +R++ YG+ P
Sbjct: 370 VMAKYPKATFSIGGHTDSSGSSSLNLRLSEKRAIAVRDYLVKNGVETTRLEAIGYGEGFP 429
Query: 134 SVYGHDEDAYAKNRRAIVFLKGC 156
A NRR + +
Sbjct: 430 IDTNKTRAGRANNRRVEIKVTNE 452
>gi|254508437|ref|ZP_05120557.1| outer membrane protein OmpA [Vibrio parahaemolyticus 16]
gi|219548647|gb|EED25652.1| outer membrane protein OmpA [Vibrio parahaemolyticus 16]
Length = 323
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Query: 54 FDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F+ +S ++P Q L+ + + + G+ D G+ + L +RA AV N
Sbjct: 215 FELNSSKLKPESTQKLNELVAFMNQYPQSTVEVVGYTDSTGAAAYNQKLSEKRAQAVANE 274
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
A+GI ASR+ V+ G+ P ++ NRR + + G
Sbjct: 275 LEAQGIDASRITVSGQGENNPVASNETKEGRMMNRRVEMTVPG 317
>gi|148652191|ref|YP_001279284.1| OmpA/MotB domain-containing protein [Psychrobacter sp. PRwf-1]
gi|148571275|gb|ABQ93334.1| OmpA/MotB domain protein [Psychrobacter sp. PRwf-1]
Length = 403
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 44/142 (30%), Gaps = 5/142 (3%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
D + + + + ++ + VFFD I+ ++ + + ++
Sbjct: 254 DTPVNTVVDENGCPVQVQIDDELKMEL--RVFFDNDKSVIKEQYKPEIAKVAEKMREYPN 311
Query: 82 DFLIEGHADEL--GSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVYGH 138
S + L RA AV +R+ YG + P
Sbjct: 312 SSASIEGHASKTGPSARYNQRLSEARAIAVKTMLTNEFGVAPNRLSTVGYGYDRPIAPND 371
Query: 139 DEDAYAKNRRAIVFLKGCRANT 160
E+ A NRR + G + T
Sbjct: 372 TEEGRAMNRRVYAVITGNKTMT 393
>gi|254785497|ref|YP_003072926.1| OmpA family protein [Teredinibacter turnerae T7901]
gi|237684013|gb|ACR11277.1| OmpA family protein [Teredinibacter turnerae T7901]
Length = 305
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 51/131 (38%), Gaps = 4/131 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
++ S ++ +V + F + S + A Q+ + L L + + GH D
Sbjct: 91 GAGMVTVSGNEDWVEIAVKSQLLFASGSAAPSTAAQQIFNELADVLAPFENAIAVSGHTD 150
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ ++ L RA AV N G++ R+ T YG+ P + A N
Sbjct: 151 NVPIRNQQFQNNWELSAARAVAVVNLLAYAGVAPERLAATGYGEFQPVADNNSAQGRAAN 210
Query: 147 RRAIVFLKGCR 157
RR ++ + +
Sbjct: 211 RRVVLRIARTK 221
>gi|329893686|ref|ZP_08269820.1| 18K peptidoglycan-associated outer membrane lipoprotein [gamma
proteobacterium IMCC3088]
gi|328923613|gb|EGG30925.1| 18K peptidoglycan-associated outer membrane lipoprotein [gamma
proteobacterium IMCC3088]
Length = 182
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 62/120 (51%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
V E + + G V+F+ S ++ VL + L+ +EGH DE
Sbjct: 63 QVAAELRRLQDDARMAGSVVYFEFDSSTLTDTGRAVLDKHVALLKNTGASVRLEGHTDER 122
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
G+R ++ALG RRA AV +Y + +GI R++ S+G+E P YG E ++++NRR +
Sbjct: 123 GTREYNMALGERRANAVRDYMMVKGIPGYRLESISFGEEKPVSYGSSEVSWSQNRRVEIK 182
>gi|315649793|ref|ZP_07902876.1| OmpA/MotB domain protein [Paenibacillus vortex V453]
gi|315274767|gb|EFU38148.1| OmpA/MotB domain protein [Paenibacillus vortex V453]
Length = 270
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 41/122 (33%), Gaps = 6/122 (4%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE-----L 92
S + + ++ D FD ++ VL L S + IEGH D
Sbjct: 143 SDEPQGIAITLSDRFLFDVGKAELKSGAAPVLGKLASLFGDLNTTVSIEGHTDNVPIGRH 202
Query: 93 GSRNSSIALGLRRAYAVFNY-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
S + L RA +V + + + + Y P+ + KNRR +
Sbjct: 203 SSYKDNWELSGARAMSVLRFFLEDSKLDPAGFQYAGYADTRPAADNATPEGKQKNRRVEI 262
Query: 152 FL 153
+
Sbjct: 263 TV 264
>gi|224826141|ref|ZP_03699244.1| peptidoglycan-associated lipoprotein [Lutiella nitroferrum 2002]
gi|224601778|gb|EEG07958.1| peptidoglycan-associated lipoprotein [Lutiella nitroferrum 2002]
Length = 178
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/173 (23%), Positives = 76/173 (43%), Gaps = 22/173 (12%)
Query: 1 MQYSTIFIILSAITMMSISGIDNL---------------------DTKISSPDTVLNESS 39
M + I + + +++ ++ +
Sbjct: 1 MNLKHLLIGTATVALLAACSSTKPLETAAPTVNGSAGAGQSATLPADTGAAGQGSVAVDP 60
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSS 98
L++ S SV+FD S +++ ++ Q ++N +L+ H +I+G+ D GSR +
Sbjct: 61 LKDPNSPLSKRSVYFDFDSSAVKQSEQQTVANHAEYLKSHPTRKVVIQGNTDARGSREYN 120
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ LG RRA +V N G+ ++++ S+GKE P G+ E YA+NRRA +
Sbjct: 121 LGLGQRRAESVKNAMQVIGVKENQLEAVSFGKEKPKATGNTEADYAQNRRADI 173
>gi|152990729|ref|YP_001356451.1| flagellar motor protein MotB [Nitratiruptor sp. SB155-2]
gi|151422590|dbj|BAF70094.1| flagellar motor protein MotB [Nitratiruptor sp. SB155-2]
Length = 234
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 19/138 (13%), Positives = 37/138 (26%), Gaps = 4/138 (2%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
++ + + + V F S + ++
Sbjct: 92 ALNEIKALLQKAGIAAEVVDHGNKVLLRVNADNLFLPGSAYPTKEAAKYFMEFCKRFKES 151
Query: 80 DCDFLIEGHADELGSR----NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
I G+ D ++ L + RA + FV+ G + G+ P
Sbjct: 152 GFRINIIGYTDNQPIHTAEFRNNWELSVYRAINILRLFVSCGYDKRFLTAEGRGEYDPIA 211
Query: 136 YGHDEDAYAKNRRAIVFL 153
+ AKNRR +
Sbjct: 212 PNNTPQGRAKNRRVEFVV 229
>gi|77460924|ref|YP_350431.1| OmpA/MotB [Pseudomonas fluorescens Pf0-1]
gi|77384927|gb|ABA76440.1| putative OmpA family outer membrane protein [Pseudomonas
fluorescens Pf0-1]
Length = 237
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 1/137 (0%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LE 77
+ + S +T + +Q + ++ F T S +I + Q L+NL + E
Sbjct: 87 ADQQEKKLRASMANTGVEVQRQGDQIKLIMPGNITFATDSANIASSFYQPLNNLANSLKE 146
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+ I G+ D GSR ++ L RRA +V Y ++G+S + + G + P
Sbjct: 147 FNQNQIEIVGYTDSTGSRQHNMDLSQRRAQSVATYLTSQGVSGANLSARGAGPDNPIASN 206
Query: 138 HDEDAYAKNRRAIVFLK 154
D + A+NRR V LK
Sbjct: 207 GDVNGRAQNRRVEVNLK 223
>gi|326334952|ref|ZP_08201152.1| outer membrane protein OprF [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325692757|gb|EGD34696.1| outer membrane protein OprF [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 376
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 1/129 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFL 84
T++ +P+ + + + ++ FD ++ +L N+ ++++ D +F+
Sbjct: 237 TRVETPEEREARTIRVTKEINLYAKTILFDLDKAIVKTQAEFILDNIAKIMQENEDFNFV 296
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
IEGH D G+ ++ L RA A+ Y V +GI+ R++ YG P E
Sbjct: 297 IEGHTDNTGTPEHNLQLSQERADAIRAYLVNKGINKKRLEAKGYGLSRPLESNDTERGRE 356
Query: 145 KNRRAIVFL 153
NRR + +
Sbjct: 357 INRRVEINV 365
>gi|295688124|ref|YP_003591817.1| peptidoglycan-associated lipoprotein [Caulobacter segnis ATCC
21756]
gi|295430027|gb|ADG09199.1| peptidoglycan-associated lipoprotein [Caulobacter segnis ATCC
21756]
Length = 184
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 48/111 (43%), Positives = 67/111 (60%), Gaps = 1/111 (0%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRN 96
+ F +VGD V+FDT YS+R VL+ W IEG+ADE G+R
Sbjct: 63 PGSVQDFVVNVGDRVYFDTDEYSVRADGQPVLAGQAQWLNRYPSVKVRIEGNADERGTRE 122
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
++ALG RRA AV ++ +A+G+SASR++ S+GKE P G E+A+AKNR
Sbjct: 123 YNLALGARRANAVRDFLIAQGVSASRIETISFGKEKPIDAGSTEEAWAKNR 173
>gi|126724952|ref|ZP_01740795.1| OmpA family protein [Rhodobacterales bacterium HTCC2150]
gi|126706116|gb|EBA05206.1| OmpA family protein [Rhodobacterales bacterium HTCC2150]
Length = 218
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 53/133 (39%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
D + S + ++ + ++ ++ + FD S + + L + + +
Sbjct: 82 QAADLEKSLDNDDVSIVNEGDRLVVTLPQDILFDVDSDFVSSSLRGDLYKVANNLNSYPN 141
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
I GH D GS + L RRA +V + G++A R+ G++ P
Sbjct: 142 STIQIIGHTDNSGSAAHNQDLSARRAGSVSGILIDGGVAAGRVVSFGRGEDQPVATNLTA 201
Query: 141 DAYAKNRRAIVFL 153
+ A+NRR + +
Sbjct: 202 EGRAENRRVEIII 214
>gi|114327771|ref|YP_744928.1| peptidoglycan-associated lipoprotein [Granulibacter bethesdensis
CGDNIH1]
gi|114315945|gb|ABI62005.1| peptidoglycan-associated lipoprotein [Granulibacter bethesdensis
CGDNIH1]
Length = 196
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 4/151 (2%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKI---SSPDTVLNESSLQEQFSSSVGDSVFFDTS 57
M Y + + + SG D + +S QE +VGD VF+ +
Sbjct: 39 MNYKLFGAMAVVALLAACSGSDQSANQGGAGASTTATGVVPGSQEDLVQNVGDRVFYAFN 98
Query: 58 SYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
S+ L +W + + G+ D+ G+ ++ALG RRA A ++ VA+
Sbjct: 99 QSSLSTDAQGTLDRQSAWLQKYPQVSVQVAGNCDDRGTEEYNLALGQRRANAARDFLVAK 158
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
G+++SR+ SYGK+ P+ G DE A+A+NR
Sbjct: 159 GVASSRITTISYGKDRPTAVGDDEQAWAQNR 189
>gi|52079917|ref|YP_078708.1| flagellar motor protein MotB [Bacillus licheniformis ATCC 14580]
gi|52785288|ref|YP_091117.1| flagellar motor protein MotB [Bacillus licheniformis ATCC 14580]
gi|52003128|gb|AAU23070.1| motility protein B [Bacillus licheniformis ATCC 14580]
gi|52347790|gb|AAU40424.1| MotB [Bacillus licheniformis ATCC 14580]
Length = 259
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 49/128 (38%), Gaps = 6/128 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+N E S+ D++FFD+ IR DI + + + + +I GH D
Sbjct: 120 QKQVNTKLTDEGLLLSIEDNIFFDSGKAEIRQQDIPLAKEVSDLLVLNPPRNIVISGHTD 179
Query: 91 ELGSRNSS----IALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAK 145
+ RNS L + RA + +++ YG+ P E+ K
Sbjct: 180 NVPIRNSQFKSNWHLSVMRAVNFMGLLIENPKLDAKIFSAKGYGEFKPIASNDTEEGRRK 239
Query: 146 NRRAIVFL 153
NRR + +
Sbjct: 240 NRRVEILI 247
>gi|158320524|ref|YP_001513031.1| OmpA/MotB domain-containing protein [Alkaliphilus oremlandii
OhILAs]
gi|158140723|gb|ABW19035.1| OmpA/MotB domain protein [Alkaliphilus oremlandii OhILAs]
Length = 254
Score = 79.8 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 49/131 (37%), Gaps = 9/131 (6%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGH 88
+T + S D+V FD ++P ++L ++ +L + +EGH
Sbjct: 113 ETEVLVSQESRGLMLRFQDNVLFDPGKAELKPRSKEILQDIAEFLRSPELKDKDIRVEGH 172
Query: 89 ADE-----LGSRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDA 142
D ++ L RA V YF+ + R + YG+ P +
Sbjct: 173 TDTVKVNPTSIYPTNWELSTGRASNVVRYFIEEIDMDPERFSIAGYGEYQPIAPNDTVEN 232
Query: 143 YAKNRRAIVFL 153
+KNRR + +
Sbjct: 233 KSKNRRVDIVI 243
>gi|325983492|ref|YP_004295894.1| OmpA/MotB domain-containing protein [Nitrosomonas sp. AL212]
gi|325533011|gb|ADZ27732.1| OmpA/MotB domain protein [Nitrosomonas sp. AL212]
Length = 227
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 1/129 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FL 84
++ V + + ++ + FDT I+P +L N + L ++
Sbjct: 83 ETATAGTGVQVTQTEDNRLKLNIPSDISFDTGRADIKPGFRPILDNFATTLISNEGTAVK 142
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
I GH D GS + L + RA + +Y V+RG+S R+++ G P + A
Sbjct: 143 IIGHTDSTGSDAINNPLSVNRAASTRDYLVSRGVSIKRIQIDGRGSREPMAENDTPENRA 202
Query: 145 KNRRAIVFL 153
+NRR +F+
Sbjct: 203 ENRRVEIFV 211
>gi|238918002|ref|YP_002931516.1| outer membrane lipoprotein [Edwardsiella ictaluri 93-146]
gi|238867570|gb|ACR67281.1| inner membrane lipoprotein YiaD [Edwardsiella ictaluri 93-146]
Length = 219
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD++S +++PA L+ + L+++ + G+ D
Sbjct: 94 GTGVSVTRQGDNIVLNMPNNVTFDSNSSNLKPAGANTLTGVAMVLKEYQKTAVNVVGYTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GSR+ ++ L +RA +V + + +G+SA R++ G P A+NRR
Sbjct: 154 STGSRDLNMRLSQQRADSVASALIVQGVSAGRIRTIGMGPANPIATNSTAAGKAQNRRVE 213
Query: 151 VFLK 154
+ L
Sbjct: 214 ITLS 217
>gi|332525185|ref|ZP_08401360.1| OmpA/MotB domain-containing protein [Rubrivivax benzoatilyticus
JA2]
gi|332108469|gb|EGJ09693.1| OmpA/MotB domain-containing protein [Rubrivivax benzoatilyticus
JA2]
Length = 211
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 1/129 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI 85
+ ++ + + + +V + F ++P+ VL L++ I
Sbjct: 80 EQATAGTGIDVARTPDNELKVNVPSDLSFAVGRADLQPSLRPVLDQFAKGLDQTM-HVRI 138
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
GH D GS + L L RA V +Y RG+ A+R+++ G P + AK
Sbjct: 139 VGHTDSTGSDAINDPLSLARARTVRDYLEDRGVPAARLEIAGRGSREPVADNGSDAGRAK 198
Query: 146 NRRAIVFLK 154
NRR +FL+
Sbjct: 199 NRRVEIFLR 207
>gi|259415100|ref|ZP_05739022.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
gi|259349010|gb|EEW60764.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
Length = 638
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 50/131 (38%), Gaps = 3/131 (2%)
Query: 26 TKISSPDTVLNESSL--QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCD 82
P+ L +L E + D + F+ S ++ +V+ + L++ +
Sbjct: 469 EAPPEPEDQLMAPALCEAELAAIQRADKIAFEPGSATVAADSARVIDKIAKLLQQCGEIP 528
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
I+GH D G ++ L RA +V N AR I YG++ P ED
Sbjct: 529 LEIQGHTDSQGREEMNLNLSQARAQSVLNALRARRILTGSFVAKGYGEDNPIASNSTEDG 588
Query: 143 YAKNRRAIVFL 153
NRR L
Sbjct: 589 REANRRIEFRL 599
>gi|156934764|ref|YP_001438680.1| peptidoglycan-associated outer membrane lipoprotein [Cronobacter
sakazakii ATCC BAA-894]
gi|260597140|ref|YP_003209711.1| peptidoglycan-associated outer membrane lipoprotein [Cronobacter
turicensis z3032]
gi|156533018|gb|ABU77844.1| hypothetical protein ESA_02604 [Cronobacter sakazakii ATCC BAA-894]
gi|260216317|emb|CBA29304.1| Peptidoglycan-associated lipoprotein [Cronobacter turicensis z3032]
Length = 172
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 54/171 (31%), Positives = 79/171 (46%), Gaps = 19/171 (11%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPD--------------TVLNESSLQE 42
MQ + + I L + + + S N S E + +
Sbjct: 1 MQLNKVLKGLMIALPVMAIAACSSNKNASNDQSGEGMLGAGTGMNGNGGNMSSEEQARLQ 60
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIAL 101
+ V+FD Y IR +L ++L + +EGHADE G+ +I+L
Sbjct: 61 MQQLQQNNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADERGTPEYNISL 120
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
G RRA AV Y +G+SA ++ + SYGKE P+V GHDE AYAKNRRA++
Sbjct: 121 GERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYAKNRRAVLV 171
>gi|110638331|ref|YP_678540.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
gi|110281012|gb|ABG59198.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
Length = 424
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 60/147 (40%), Gaps = 2/147 (1%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNES--SLQEQFSSSVGDSVFFDTSSYSIRPADI 66
++S T++ + + +ES +++ + +F + + +
Sbjct: 275 VVSTTTILQPADTSKQIKTTKTEIKPKDESVFDVKKGDKIVLKHVLFVQSKDDFLPESYA 334
Query: 67 QVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT 126
++ + + + + GH D G+R+ ++ L RA V +Y V+RGI A R+ V
Sbjct: 335 ELDRLVATMNQHPQITIEVSGHTDNQGNRDLNLKLSEERAIKVKDYLVSRGIEAKRINVK 394
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVFL 153
YG + P E+ NRR +
Sbjct: 395 GYGPDKPISANDTEEHRRLNRRVEFEI 421
>gi|4580971|gb|AAD24558.1|AF117966_1 OprF [Pseudomonas mendocina]
Length = 318
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 2/102 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
V FD ++ + NL ++ + +EGH D +GS + L RRA AV
Sbjct: 216 DVKFDFDKDRVKEESYGDIKNLADFMNQYPQTTTTVEGHTDSVGSDAYNQGLSERRANAV 275
Query: 110 FNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
N V + + SR+ YG+ P + A NRR
Sbjct: 276 RNVLVNQYGVDGSRVNAVGYGETRPVADNATDSGRAINRRVE 317
>gi|320529440|ref|ZP_08030528.1| putative flagellar motor protein MotB [Selenomonas artemidis F0399]
gi|320138406|gb|EFW30300.1| putative flagellar motor protein MotB [Selenomonas artemidis F0399]
Length = 310
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 48/128 (37%), Gaps = 6/128 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
++ ++ + + FD+ S +++ Q++ + + L I GH D
Sbjct: 114 QDQVSTELSEDGLMIRLKEKALFDSGSAALQGQAEQIVPVIAALLTSLPERVTISGHTDN 173
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARGI--SASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ S+ L RA ++ + + +R Y + P E+ A+
Sbjct: 174 VPIATSQFPSNWELSSARAVSLMRGLMGAQPSLNPARFSALGYSEYRPIASNDTEEGRAQ 233
Query: 146 NRRAIVFL 153
NRR VF+
Sbjct: 234 NRRVEVFI 241
>gi|255033902|ref|YP_003084523.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
18053]
gi|254946658|gb|ACT91358.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
Length = 638
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNS 97
E+ + V +++FF T Y + L + + + I GH D++GS
Sbjct: 522 EAIEKDRAEVLNNIFFKTGEYILDDKSKVELDKMSDFLHKNKTIKIEISGHTDDVGSDTE 581
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
++AL RRA +V Y GI+A R+ YG+ P ++ KNRR
Sbjct: 582 NMALSQRRAQSVQYYLQQSGIAADRILAKGYGETTPKAPNDSDENRQKNRRIE 634
>gi|172059479|ref|YP_001807131.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6]
gi|171991996|gb|ACB62915.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6]
Length = 316
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++ F+T S ++ P Q+L + + + + I GH D G+R S+IAL RA
Sbjct: 209 NRTIEFETGSATLTPQGRQILDQMAAALSKLQNRTVDIIGHTDNSGNRTSNIALSQARAD 268
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV Y + + I +M T G + P + A+NRR +
Sbjct: 269 AVKGYLITKSIPPQQMTTTGVGPDQPIAPNDTAEGRARNRRIEFRV 314
>gi|313895933|ref|ZP_07829487.1| chemotaxis protein MotB [Selenomonas sp. oral taxon 137 str. F0430]
gi|312975358|gb|EFR40819.1| chemotaxis protein MotB [Selenomonas sp. oral taxon 137 str. F0430]
Length = 310
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 48/128 (37%), Gaps = 6/128 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
++ ++ + + FD+ S +++ Q++ + + L I GH D
Sbjct: 114 QDQVSTELSEDGLMIRLKEKALFDSGSAALQGQAEQIVPVIAALLTSLPERVTISGHTDN 173
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARGI--SASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ S+ L RA ++ + + +R Y + P E+ A+
Sbjct: 174 VPIATSQFPSNWELSSARAVSLMRGLMGAQPSLNPARFSALGYSEYRPIASNDTEEGRAQ 233
Query: 146 NRRAIVFL 153
NRR VF+
Sbjct: 234 NRRVEVFI 241
>gi|283784494|ref|YP_003364359.1| peptidoglycan-associated lipoprotein [Citrobacter rodentium ICC168]
gi|282947948|emb|CBG87512.1| peptidoglycan-associated lipoprotein [Citrobacter rodentium ICC168]
Length = 173
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 55/172 (31%), Positives = 81/172 (47%), Gaps = 20/172 (11%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNL---------------DTKISSPDTVLNESSLQ 41
MQ + + I L + + + S N D S + E +
Sbjct: 1 MQLNKVLKGLMIALPVMAIAACSSNKNASNDGSEGMLGAGTGMDANGSGGNMSSEEQARL 60
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIA 100
+ + V+FD Y IR +L ++L + +EGHADE G+ +I+
Sbjct: 61 QMQQLQQNNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADERGTPEYNIS 120
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
LG RRA AV Y +G+SA ++ + SYGKE P+V GHDE AYAKNRRA++
Sbjct: 121 LGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYAKNRRAVLV 172
>gi|254475411|ref|ZP_05088797.1| OmpA/MotB [Ruegeria sp. R11]
gi|214029654|gb|EEB70489.1| OmpA/MotB [Ruegeria sp. R11]
Length = 627
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 40/130 (30%), Gaps = 1/130 (0%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDF 83
+ + + E E + + F+ S ++ L +
Sbjct: 470 EPPEPADKPMSPELCEAELAAVQTVSKITFEPGSATVAAGSRDTLDQIADILARCDGVRL 529
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
I+GH D G + L RA +V N R I S YG+ P E+
Sbjct: 530 EIQGHTDSQGREEMNQNLSQARAQSVLNELRDRRIVTSSFSAKGYGESTPIATNDTEEGR 589
Query: 144 AKNRRAIVFL 153
NRR L
Sbjct: 590 EANRRIEFRL 599
>gi|320173827|gb|EFW49008.1| putative outer membrane lipoprotein [Shigella dysenteriae CDC
74-1112]
Length = 195
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD+SS +++PA L+ + L+++ + G+ D
Sbjct: 70 GTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTD 129
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + ++ L +RA +V + + +G+ ASR++ G P + A+NRR
Sbjct: 130 STGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVE 189
Query: 151 VFLK 154
+ L
Sbjct: 190 ITLS 193
>gi|170720329|ref|YP_001748017.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619]
gi|169758332|gb|ACA71648.1| OmpA/MotB domain protein [Pseudomonas putida W619]
Length = 237
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 52/137 (37%), Gaps = 7/137 (5%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-L 76
+ +PD SL +Q V F S + Q L +L
Sbjct: 106 GCPLPQYPPSQPAPDPQPQVISLDDQ------GQVMFAFDSADLTAGSQQRLQSLLPRLN 159
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
E + GH D +GS + + AL RRA +V Y +++G++ ++ G P
Sbjct: 160 ELGVSRIKVVGHTDNVGSDSYNQALSERRAASVAQYLISQGLAPQKVTSEGRGASEPVAE 219
Query: 137 GHDEDAYAKNRRAIVFL 153
E A+NRR + L
Sbjct: 220 NDTEQGRAQNRRVDLHL 236
>gi|327395890|dbj|BAK13312.1| inner membrane lipoprotein YiaD precursor [Pantoea ananatis
AJ13355]
Length = 237
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD+SS S++PA L+ + L+++ + GH D
Sbjct: 111 GTGVSVTRQGDNIVLNMPNNVTFDSSSSSLKPAGANTLTGVAMVLKEYPKTAVNVVGHTD 170
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GSR ++ L +RA +V + + +G+++ R+ G + P E A+NRR
Sbjct: 171 STGSRALNMRLSQQRAESVASALIVQGVASDRLHTRGAGPDSPVATNSTEAGKAQNRRVE 230
Query: 151 VFLK 154
+ L
Sbjct: 231 ITLS 234
>gi|312887218|ref|ZP_07746822.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
gi|311300530|gb|EFQ77595.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
Length = 177
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 54/136 (39%), Gaps = 5/136 (3%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
+ + ++ +P V + S++ F+ S ++ + +L + ++
Sbjct: 44 VPEEKKPEPQVEAPKEVAPVVEKPDYNFSNLQ----FEFDSAILKTSSYPMLDKVARAMK 99
Query: 78 KH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
F++ G++ G+ ++ L RA +V Y + G+ AS++ YG P
Sbjct: 100 LDASVKFVLNGYSSAEGTPEHNLLLSEERANSVKTYLLNAGVDASQLTAKGYGDSNPITP 159
Query: 137 GHDEDAYAKNRRAIVF 152
E+ NRR +
Sbjct: 160 NTTEEGRVLNRRVEIK 175
>gi|227538150|ref|ZP_03968199.1| possible outer membrane protein [Sphingobacterium spiritivorum ATCC
33300]
gi|227241993|gb|EEI92008.1| possible outer membrane protein [Sphingobacterium spiritivorum ATCC
33300]
Length = 628
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRA 106
V +++FF + Y + P+ L+ L +L+++ I GH D G+ + L RA
Sbjct: 520 VLNNIFFALNKYDLLPSSKSDLNTLVLFLQENPLIRIEIGGHTDNTGNDQLNKTLSDNRA 579
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV Y +ARGISA+R+ YG P E A NRR +
Sbjct: 580 KAVVTYLIARGISANRLLAKGYGSNQPLATNDTETGKALNRRTEFKI 626
>gi|188036026|pdb|2K1S|A Chain A, Solution Nmr Structure Of The Folded C-Terminal Fragment
Of Yiad From Escherichia Coli. Northeast Structural
Genomics Consortium Target Er553
Length = 149
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD+SS +++PA L+ + L+++ + G+ D
Sbjct: 16 GTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTD 75
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + ++ L +RA +V + + +G+ ASR++ G P + A+NRR
Sbjct: 76 STGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVE 135
Query: 151 VFLK 154
+ L
Sbjct: 136 ITLS 139
>gi|220919426|ref|YP_002494730.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
gi|219957280|gb|ACL67664.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 206
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 53/130 (40%), Gaps = 1/130 (0%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDF 83
D + + + + + + FD+ S +++P I L +G + D
Sbjct: 71 DKQHKELEKIAETKRTENGLLVEMKGDILFDSGSSALKPEAISKLEQMGDVLAKYGDDRI 130
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
IEG+ D GS++ + L LRRA AV V RG+ ++ G P
Sbjct: 131 RIEGYTDATGSKSMNEELSLRRADAVKRVLVGRGVQEKQITALGMGPVRPVADNGTSAGR 190
Query: 144 AKNRRAIVFL 153
A+NRR + +
Sbjct: 191 AQNRRVELHI 200
>gi|150007860|ref|YP_001302603.1| OmpA family outer membrane protein [Parabacteroides distasonis ATCC
8503]
gi|262381639|ref|ZP_06074777.1| outer membrane protein [Bacteroides sp. 2_1_33B]
gi|298376779|ref|ZP_06986734.1| lipoprotein PG3 [Bacteroides sp. 3_1_19]
gi|301310112|ref|ZP_07216051.1| lipoprotein PG3 [Bacteroides sp. 20_3]
gi|149936284|gb|ABR42981.1| outer membrane protein, OmpA family [Parabacteroides distasonis
ATCC 8503]
gi|262296816|gb|EEY84746.1| outer membrane protein [Bacteroides sp. 2_1_33B]
gi|298266657|gb|EFI08315.1| lipoprotein PG3 [Bacteroides sp. 3_1_19]
gi|300831686|gb|EFK62317.1| lipoprotein PG3 [Bacteroides sp. 20_3]
Length = 227
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 52/129 (40%), Gaps = 1/129 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFL 84
DT + + E + + F T+S ++ A L N + L+ D D
Sbjct: 83 EATLPEDTKIESVNNGEALKVTFDSGILFATNSSTLSDASKSALRNFATSLKANPDTDIR 142
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
I G D G + + L +RA +V++Y + +G+S RM G P + +
Sbjct: 143 IIGFTDNTGKVDYNQTLSEKRAKSVYDYLMMQGVSTDRMVYEGKGIHDPVASNDTPEGRS 202
Query: 145 KNRRAIVFL 153
NRR + +
Sbjct: 203 LNRRVEIVI 211
>gi|78777594|ref|YP_393909.1| OmpA/MotB [Sulfurimonas denitrificans DSM 1251]
gi|78498134|gb|ABB44674.1| OmpA/MotB [Sulfurimonas denitrificans DSM 1251]
Length = 176
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 23/174 (13%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD------------ 50
+I + + ++ +SG + D ++ + D + E + + +SSV
Sbjct: 1 MKSIVLASAVAALLVLSGCGDKDPQVDANDGAVAEQAAPAKSASSVKAPTSSNTETAAEY 60
Query: 51 ---------SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI--EGHADELGSRNSSI 99
+++FD ++I+ LS S + F + EG+ DE GS +
Sbjct: 61 MARIEKELKTIYFDFDKFNIKADMQANLSTDASVAKSSASKFQLKLEGNCDEWGSDEYNF 120
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
ALGL+RA +V VA G+ A+R+ + S+G+ P+ ++ +A+NRR L
Sbjct: 121 ALGLKRAESVKKALVAEGVDANRISMVSFGESNPTCTDKTKECWAENRRVDFKL 174
>gi|86359052|ref|YP_470944.1| outer membrane lipoprotein [Rhizobium etli CFN 42]
gi|86283154|gb|ABC92217.1| outer membrane lipoprotein [Rhizobium etli CFN 42]
Length = 178
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 50/133 (37%), Positives = 66/133 (49%), Gaps = 1/133 (0%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDF 83
+ F+ +VGD +FFDT S SIR Q L W +
Sbjct: 44 SAGDMGLGAGAATPGSTQDFTVNVGDRIFFDTDSTSIRADAAQTLDRQAQWLGRYPNYQI 103
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
+EGHADE G+R ++ALG RRA A +Y +RG+ A RMK SYGKE P D +
Sbjct: 104 TVEGHADERGTREYNLALGARRAAATKDYLASRGVPAQRMKTISYGKERPVAVCDDISCW 163
Query: 144 AKNRRAIVFLKGC 156
++NRRA+ L G
Sbjct: 164 SQNRRAVTVLGGA 176
>gi|15596316|ref|NP_249810.1| YfiB [Pseudomonas aeruginosa PAO1]
gi|218892915|ref|YP_002441784.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
LESB58]
gi|254234254|ref|ZP_04927577.1| hypothetical protein PACG_00091 [Pseudomonas aeruginosa C3719]
gi|254239490|ref|ZP_04932812.1| hypothetical protein PA2G_00103 [Pseudomonas aeruginosa 2192]
gi|9947038|gb|AAG04508.1|AE004542_4 YfiB [Pseudomonas aeruginosa PAO1]
gi|126166185|gb|EAZ51696.1| hypothetical protein PACG_00091 [Pseudomonas aeruginosa C3719]
gi|126192868|gb|EAZ56931.1| hypothetical protein PA2G_00103 [Pseudomonas aeruginosa 2192]
gi|218773143|emb|CAW28955.1| probable outer membrane protein precursor [Pseudomonas aeruginosa
LESB58]
Length = 168
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/157 (19%), Positives = 58/157 (36%), Gaps = 8/157 (5%)
Query: 5 TIFIILSAITM-MSISGIDNLDTKI---SSPDTVLNESS---LQEQFSSSVGDSVFFDTS 57
+ + L+ ++ + ++G + + VL E E + + V F +
Sbjct: 9 SRLLALALFSLVLGLAGCQTKPPQTGLSAEQIAVLQEQGFELRDEGWEFGMSSKVLFGNN 68
Query: 58 SYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
+ P L+ + L D +EGH D G + L RRA +V F
Sbjct: 69 LDRLNPDSRNTLTKIARALLAVDIDKVRLEGHTDNYGDEGYNQKLSERRAESVAAVFREA 128
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G+ A+ ++V G P ++NRR + +
Sbjct: 129 GMPAANIEVRGLGMSKPVADNKTRAGRSENRRVAIIV 165
>gi|88810551|ref|ZP_01125808.1| OmpA/MotB [Nitrococcus mobilis Nb-231]
gi|88792181|gb|EAR23291.1| OmpA/MotB [Nitrococcus mobilis Nb-231]
Length = 147
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 44/140 (31%), Positives = 62/140 (44%), Gaps = 3/140 (2%)
Query: 18 ISGIDNLDTKISSPDTVLN--ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
S D + LQ+ S ++FD S ++ + +L G +
Sbjct: 7 ASATDGSGIATRGAQGAQPFKGTELQDPASPLAKRVIYFDFDSNVVKSEYMPILKAHGEY 66
Query: 76 LEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
L H IEGH DE GSR ++ALG RRA AV G + ++ SYG+E P
Sbjct: 67 LSTHPENQVTIEGHTDERGSREYNLALGERRAKAVQRILELNGAAKEQISTVSYGEEKPL 126
Query: 135 VYGHDEDAYAKNRRAIVFLK 154
GH E A KNRRA++ +
Sbjct: 127 DPGHTEAALTKNRRALIVYR 146
>gi|325294743|ref|YP_004281257.1| OmpA/MotB domain protein [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325065191|gb|ADY73198.1| OmpA/MotB domain protein [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 233
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 38/105 (36%), Gaps = 4/105 (3%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSIALGLRRAYA 108
F S I ++ + L++ + IEGH D + S+ L RA +
Sbjct: 125 LFPPGSEKPYKETIPLIMEMCKKLKELELPITIEGHTDNVPIRSKIFPSNWELSAARAVS 184
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V F+ G ++ G P + AKNRR + +
Sbjct: 185 VLRLFIQCGYDPRKLSAAGCGPYRPIAPNTTPEGRAKNRRIEIVI 229
>gi|255013439|ref|ZP_05285565.1| OmpA family outer membrane protein [Bacteroides sp. 2_1_7]
Length = 213
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 52/129 (40%), Gaps = 1/129 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFL 84
DT + + E + + F T+S ++ A L N + L+ D D
Sbjct: 69 EATLPEDTKIESVNNGEALKVTFDSGILFATNSSTLSDASKSALRNFATSLKANPDTDIR 128
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
I G D G + + L +RA +V++Y + +G+S RM G P + +
Sbjct: 129 IIGFTDNTGKVDYNQTLSEKRAKSVYDYLMMQGVSTDRMVYEGKGIHDPVASNDTPEGRS 188
Query: 145 KNRRAIVFL 153
NRR + +
Sbjct: 189 LNRRVEIVI 197
>gi|167855024|ref|ZP_02477798.1| outer membrane protein precursor PalA [Haemophilus parasuis 29755]
gi|167853872|gb|EDS25112.1| outer membrane protein precursor PalA [Haemophilus parasuis 29755]
Length = 153
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 4/153 (2%)
Query: 1 MQY--STIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSS 58
M+ + I A + + S ++ + +S + + Q + ++V+FD S
Sbjct: 1 MKKLAKVLMIAAPAFVLAACSSSNDNASANASANAGQTFGGMSVQDLQTRYNTVYFDFDS 60
Query: 59 YSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI 118
Y+++ D Q+L +L + GHADE G+ +IALG RRA AV ++ +
Sbjct: 61 YTVKAEDQQLLDAHAQYLVASKGKVTVAGHADERGTPEYNIALGQRRADAVKDFLATK-- 118
Query: 119 SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
AS + SYG+E P+V GH E Y+KNRRA++
Sbjct: 119 GASNVATVSYGEEKPAVLGHSEADYSKNRRAVL 151
>gi|145219967|ref|YP_001130676.1| OmpA/MotB domain-containing protein [Prosthecochloris vibrioformis
DSM 265]
gi|145206131|gb|ABP37174.1| OmpA/MotB domain protein [Chlorobium phaeovibrioides DSM 265]
Length = 167
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 9/163 (5%)
Query: 1 MQ--YSTIFIILSAITM-MSISGIDNLDTKISSPDTVLNESSLQ-----EQFSSSVGDSV 52
M+ + + +I + + +++ D DT S +++ + V
Sbjct: 5 MKGLLALLLMITAGCSSKSAVAPTDTADTYTPPAAPPAAVVSTPGGYGFDEYQTGPLGDV 64
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADELGSRNSSIALGLRRAYAVFN 111
F++ S + L +W+ + +EGH DE G+ +IALG RRA
Sbjct: 65 FYEFDSSELSADAEDQLKQNAAWMGANAAAATLVEGHCDERGTSEYNIALGERRAGNAKE 124
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
Y V G+ A+ ++ SYG+E P GHDE A++KNRRA LK
Sbjct: 125 YMVRLGVPAASIETMSYGEEKPFAPGHDESAWSKNRRAHFVLK 167
>gi|330445542|ref|ZP_08309194.1| peptidoglycan-associated lipoprotein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
gi|328489733|dbj|GAA03691.1| peptidoglycan-associated lipoprotein [Photobacterium leiognathi
subsp. mandapamensis svers.1.1.]
Length = 180
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 56/179 (31%), Positives = 87/179 (48%), Gaps = 27/179 (15%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD------ 50
MQ + I I+L +T+ + S D+ D+ ++ + +S +Q + D
Sbjct: 1 MQLNKILKSLAIVLPMMTLAACSSTDSADSSAANQNGTNGGNSRPDQSIVTPVDQSGSMS 60
Query: 51 ----------------SVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELG 93
+VFF + I+P +L ++L H ++EGHADE G
Sbjct: 61 EEQLLEQQLQQLRQEQTVFFKFDNSEIQPEYQAMLEAHAAYLRDHPSVKVIVEGHADERG 120
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ +IALG RRA AV Y A G+ AS++ + SYG+E P V GH + YAKNRRA++
Sbjct: 121 TPEYNIALGERRATAVAQYLQALGVPASQLSIVSYGEEKPLVLGHTDADYAKNRRAVLV 179
>gi|289679931|ref|ZP_06500821.1| OmpA/MotB [Pseudomonas syringae pv. syringae FF5]
Length = 190
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 57/144 (39%), Gaps = 2/144 (1%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
++ + L + ++GD V FD ++ + + + + +
Sbjct: 42 AKLASAQQQGRWLEDQILSLATTETDRGLVMTLGD-VLFDAGHAELKNSASRTILKVVQF 100
Query: 76 LEKHDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
L+ + + IEG+ D G R ++ L RA AV + + G+ R+ V YG+E P
Sbjct: 101 LQINPRRVVRIEGYTDSTGDRQDNLKLSKDRAQAVADVLMDLGVDEKRIHVEGYGQEFPV 160
Query: 135 VYGHDEDAYAKNRRAIVFLKGCRA 158
E A+NRR + +
Sbjct: 161 NANTFERGRAQNRRVEIVFSDEKG 184
>gi|197117412|ref|YP_002137839.1| OmpA family outer membrane lipoprotein [Geobacter bemidjiensis Bem]
gi|197086772|gb|ACH38043.1| OmpA family outer membrane lipoprotein [Geobacter bemidjiensis Bem]
Length = 228
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 52/132 (39%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
D + ++ ++ + FD +++P LS L+
Sbjct: 83 DRQAVALKKSMPEAEVVRDGDKVYVALPSGILFDLGKDALKPEAKDALSRAAGTLKDSQT 142
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
IEGH D GS + L RRA V +Y V++G+ ++M YG P+V +
Sbjct: 143 TITIEGHTDSTGSNAVNQPLSERRANRVRDYLVSQGVPGAKMAAIGYGSSRPAVPNDSDA 202
Query: 142 AYAKNRRAIVFL 153
A NRR + L
Sbjct: 203 NRALNRRVQIEL 214
>gi|312963881|ref|ZP_07778352.1| hypothetical protein PFWH6_5800 [Pseudomonas fluorescens WH6]
gi|311281916|gb|EFQ60526.1| hypothetical protein PFWH6_5800 [Pseudomonas fluorescens WH6]
Length = 429
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 42/123 (34%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+ ++ ++ F ++S SI ++ + + K + GH+D
Sbjct: 301 VAVEDKVDRSVVTIRGDELFASASASIVDDYQPLMLRIADAIRKVKGQVRVTGHSDNRPI 360
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
S+ AL RA +V A+ A R P + A+NRR
Sbjct: 361 ATLRFPSNWALSEARAKSVLEILAAKTGQADRFSAEGRSDTEPLATNSTAEGRARNRRVE 420
Query: 151 VFL 153
+ +
Sbjct: 421 ITV 423
>gi|311108875|ref|YP_003981728.1| OmpA family protein 4 [Achromobacter xylosoxidans A8]
gi|310763564|gb|ADP19013.1| OmpA family protein 4 [Achromobacter xylosoxidans A8]
Length = 264
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 55/140 (39%), Gaps = 1/140 (0%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL 72
I + ++ ++ ++ V F+T S ++ ++L +
Sbjct: 121 IASAFATSLNPTYKIVNGLRVSASKDEQGLLDQVLTNRVVEFETGSATLTTRGRELLDKV 180
Query: 73 GSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
+ H I GH D GSR++++AL RA AV Y V +G+ +R + G +
Sbjct: 181 ADVVPKLHSDKVQIIGHTDSSGSRSTNLALSQARADAVKTYLVDKGLPPARFETLGAGPD 240
Query: 132 MPSVYGHDEDAYAKNRRAIV 151
P + AKNRR
Sbjct: 241 QPLATNATAEGRAKNRRIEF 260
>gi|145588969|ref|YP_001155566.1| OmpA/MotB domain-containing protein [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
gi|145047375|gb|ABP34002.1| OmpA/MotB domain protein [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 163
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 9/163 (5%)
Query: 1 MQYSTIFIILSAITMMSISGI-----DNLDTKISSPDTVLNESSLQEQFSSSVG-DSVFF 54
M++ I I+ +++ DN S + L + + SS G S++F
Sbjct: 1 MKFFKICILAIFAVLVAACSTGVKLDDNNRVATVSAGSPLTYDPISDPRSSVYGKRSIYF 60
Query: 55 DTSSYSIRPADIQVLSNLGSW---LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
+ SYSI P ++S S+ E+ +I+G+ D+ G+ ++ALG RR+ AV
Sbjct: 61 EFDSYSIDPKYASIISAHASYLKSFERQKASIIIQGNTDDRGTAEYNLALGQRRSEAVKK 120
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+A G+S S+++ S+GKE P E A+ +NRRA + +
Sbjct: 121 ALLALGVSESQVEAVSFGKEKPENPAQTEAAFKENRRADIVYR 163
>gi|167744038|ref|ZP_02416812.1| hypothetical protein Bpse14_38553 [Burkholderia pseudomallei 14]
Length = 379
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 4/132 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ +++ ++ + F + S S+ + VL+ + L + + +
Sbjct: 233 EPEIAAGLVSVRDEADRSVIVLRGDGLFGSGSTSVIDRYMPVLTRVADALNQVQGNVRVS 292
Query: 87 GHADELGSRN----SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
G+ D+ S+ L RA AV + AR R+ G P
Sbjct: 293 GYTDDTPVHTARFASNWDLSRERAQAVRSLIAARLDRPERITAEGRGTLDPVAPNDSPAN 352
Query: 143 YAKNRRAIVFLK 154
A+NRR + L
Sbjct: 353 RARNRRVEITLM 364
>gi|110640949|ref|YP_668677.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli 536]
gi|117622932|ref|YP_851845.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli APEC O1]
gi|215485763|ref|YP_002328194.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli O127:H6 str. E2348/69]
gi|218557654|ref|YP_002390567.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli S88]
gi|218688532|ref|YP_002396744.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli ED1a]
gi|227884292|ref|ZP_04002097.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli 83972]
gi|300992344|ref|ZP_07179867.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 200-1]
gi|300993167|ref|ZP_07180250.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 45-1]
gi|301051339|ref|ZP_07198162.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 185-1]
gi|306812852|ref|ZP_07447045.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli NC101]
gi|312965177|ref|ZP_07779414.1| peptidoglycan-associated lipoprotein [Escherichia coli 2362-75]
gi|331656760|ref|ZP_08357722.1| peptidoglycan-associated lipoprotein [Escherichia coli TA206]
gi|331682171|ref|ZP_08382793.1| peptidoglycan-associated lipoprotein [Escherichia coli H299]
gi|110342541|gb|ABG68778.1| peptidoglycan-associated lipoprotein precursor [Escherichia coli
536]
gi|115512056|gb|ABJ00131.1| peptidoglycan-associated lipoprotein precursor [Escherichia coli
APEC O1]
gi|215263835|emb|CAS08173.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli O127:H6 str. E2348/69]
gi|218364423|emb|CAR02103.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli S88]
gi|218426096|emb|CAR06914.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli ED1a]
gi|222032477|emb|CAP75216.1| Peptidoglycan-associated lipoprotein [Escherichia coli LF82]
gi|227839044|gb|EEJ49510.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli 83972]
gi|281177884|dbj|BAI54214.1| peptidoglycan-associated lipoprotein [Escherichia coli SE15]
gi|294493682|gb|ADE92438.1| peptidoglycan-associated lipoprotein [Escherichia coli IHE3034]
gi|300297001|gb|EFJ53386.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 185-1]
gi|300305361|gb|EFJ59881.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 200-1]
gi|300406697|gb|EFJ90235.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 45-1]
gi|305853615|gb|EFM54054.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli NC101]
gi|307552592|gb|ADN45367.1| peptidoglycan-associated lipoprotein [Escherichia coli ABU 83972]
gi|307627845|gb|ADN72149.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli UM146]
gi|312290268|gb|EFR18151.1| peptidoglycan-associated lipoprotein [Escherichia coli 2362-75]
gi|312945265|gb|ADR26092.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli O83:H1 str. NRG 857C]
gi|315287144|gb|EFU46556.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 110-3]
gi|315292655|gb|EFU52007.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 153-1]
gi|315299256|gb|EFU58508.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 16-3]
gi|323191086|gb|EFZ76351.1| peptidoglycan-associated lipoprotein [Escherichia coli RN587/1]
gi|323953133|gb|EGB49000.1| peptidoglycan lipoprotein [Escherichia coli H252]
gi|323958485|gb|EGB54191.1| peptidoglycan lipoprotein [Escherichia coli H263]
gi|324009565|gb|EGB78784.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 57-2]
gi|324010464|gb|EGB79683.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 60-1]
gi|330910492|gb|EGH39002.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli AA86]
gi|331055008|gb|EGI27017.1| peptidoglycan-associated lipoprotein [Escherichia coli TA206]
gi|331080595|gb|EGI51771.1| peptidoglycan-associated lipoprotein [Escherichia coli H299]
Length = 173
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 55/172 (31%), Positives = 81/172 (47%), Gaps = 20/172 (11%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSP---------------DTVLNESSLQ 41
MQ + + I L + + + S N S + E +
Sbjct: 1 MQLNKVLKGLMIALPVMAIAACSSNKNASNDGSEGMLGAGTGMDANGGNGNMSSEEQARL 60
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIA 100
+ + V+FD Y IR Q+L ++L + +EGHADE G+ +I+
Sbjct: 61 QMQQLQQNNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADERGTPEYNIS 120
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
LG RRA AV Y +G+SA ++ + SYGKE P+V GHDE AYAKNRRA++
Sbjct: 121 LGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYAKNRRAVLV 172
>gi|309787755|ref|ZP_07682366.1| inner membrane lipoyiaD domain protein [Shigella dysenteriae 1617]
gi|308924505|gb|EFP70001.1| inner membrane lipoyiaD domain protein [Shigella dysenteriae 1617]
Length = 147
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD+SS +++PA L+ + L+++ + G+ D
Sbjct: 22 GTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTD 81
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + ++ L +RA +V + + +G+ ASR++ G P + A+NRR
Sbjct: 82 STGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVE 141
Query: 151 VFLK 154
+ L
Sbjct: 142 ITLS 145
>gi|167725111|ref|ZP_02408347.1| hypothetical protein BpseD_39196 [Burkholderia pseudomallei DM98]
Length = 407
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 4/132 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ +++ ++ + F + S S+ + VL+ + L + + +
Sbjct: 261 EPEIAAGLVSVRDEADRSVIVLRGDGLFGSGSTSVIDRYMPVLTRVADALNQVQGNVRVS 320
Query: 87 GHADELGSRN----SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
G+ D+ S+ L RA AV + AR R+ G P
Sbjct: 321 GYTDDTPVHTARFASNWDLSRERAQAVRSLIAARLDRPERITAEGRGTLDPVAPNDSPAN 380
Query: 143 YAKNRRAIVFLK 154
A+NRR + L
Sbjct: 381 RARNRRVEITLM 392
>gi|119776228|ref|YP_928968.1| OmpA family protein [Shewanella amazonensis SB2B]
gi|119768728|gb|ABM01299.1| OmpA family protein [Shewanella amazonensis SB2B]
Length = 222
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 59/134 (44%), Gaps = 1/134 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH- 79
+ + + ++ + + ++ + V F + P +QVL ++ +++
Sbjct: 85 VQETKLRQQLQASGVSVTRNGDNIILNMPNDVTFAVDKTDLSPRAMQVLDSVALVAKEYS 144
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ G+ D G+ + ++ L RA V NY +++G++A+R+ G+ P
Sbjct: 145 KTRLNVLGYTDSSGADSYNLRLSQVRASEVGNYLLSKGVAAARVSTQGMGEASPIASNAT 204
Query: 140 EDAYAKNRRAIVFL 153
+ A+NRR + L
Sbjct: 205 AEGRAQNRRVEIIL 218
>gi|53716349|ref|YP_105194.1| hypothetical protein BMAA0398 [Burkholderia mallei ATCC 23344]
gi|53723119|ref|YP_112104.1| hypothetical protein BPSS2105 [Burkholderia pseudomallei K96243]
gi|67642591|ref|ZP_00441345.1| OmpA family protein [Burkholderia mallei GB8 horse 4]
gi|121596826|ref|YP_991186.1| hypothetical protein BMASAVP1_1592 [Burkholderia mallei SAVP1]
gi|124382978|ref|YP_001025575.1| hypothetical protein BMA10229_1777 [Burkholderia mallei NCTC 10229]
gi|126443591|ref|YP_001063957.1| hypothetical protein BURPS668_A2966 [Burkholderia pseudomallei 668]
gi|126447095|ref|YP_001077649.1| hypothetical protein BMA10247_A0447 [Burkholderia mallei NCTC
10247]
gi|126458045|ref|YP_001076870.1| hypothetical protein BURPS1106A_A2841 [Burkholderia pseudomallei
1106a]
gi|167821238|ref|ZP_02452918.1| hypothetical protein Bpse9_39318 [Burkholderia pseudomallei 91]
gi|167829581|ref|ZP_02461052.1| hypothetical protein Bpseu9_38230 [Burkholderia pseudomallei 9]
gi|167908000|ref|ZP_02495205.1| hypothetical protein BpseN_37601 [Burkholderia pseudomallei NCTC
13177]
gi|226193911|ref|ZP_03789512.1| ompA family protein [Burkholderia pseudomallei Pakistan 9]
gi|237508208|ref|ZP_04520923.1| OmpA-family protein [Burkholderia pseudomallei MSHR346]
gi|242312724|ref|ZP_04811741.1| ompA family protein [Burkholderia pseudomallei 1106b]
gi|254177324|ref|ZP_04883980.1| ompA family protein [Burkholderia mallei ATCC 10399]
gi|254184501|ref|ZP_04891090.1| ompA family protein [Burkholderia pseudomallei 1655]
gi|254194178|ref|ZP_04900610.1| ompA family protein [Burkholderia pseudomallei S13]
gi|254203138|ref|ZP_04909500.1| ompA family protein [Burkholderia mallei FMH]
gi|254208472|ref|ZP_04914821.1| ompA family protein [Burkholderia mallei JHU]
gi|254300798|ref|ZP_04968242.1| ompA family protein [Burkholderia pseudomallei 406e]
gi|254359345|ref|ZP_04975617.1| ompA family protein [Burkholderia mallei 2002721280]
gi|52213533|emb|CAH39585.1| putative outer membrane porin protein [Burkholderia pseudomallei
K96243]
gi|52422319|gb|AAU45889.1| ompA family protein [Burkholderia mallei ATCC 23344]
gi|121224624|gb|ABM48155.1| ompA family protein [Burkholderia mallei SAVP1]
gi|126223082|gb|ABN86587.1| ompA family protein [Burkholderia pseudomallei 668]
gi|126231813|gb|ABN95226.1| ompA family protein [Burkholderia pseudomallei 1106a]
gi|126239949|gb|ABO03061.1| ompA family protein [Burkholderia mallei NCTC 10247]
gi|147746183|gb|EDK53261.1| ompA family protein [Burkholderia mallei FMH]
gi|147751159|gb|EDK58227.1| ompA family protein [Burkholderia mallei JHU]
gi|148028532|gb|EDK86492.1| ompA family protein [Burkholderia mallei 2002721280]
gi|157810991|gb|EDO88161.1| ompA family protein [Burkholderia pseudomallei 406e]
gi|160698364|gb|EDP88334.1| ompA family protein [Burkholderia mallei ATCC 10399]
gi|169650929|gb|EDS83622.1| ompA family protein [Burkholderia pseudomallei S13]
gi|184215093|gb|EDU12074.1| ompA family protein [Burkholderia pseudomallei 1655]
gi|225933856|gb|EEH29842.1| ompA family protein [Burkholderia pseudomallei Pakistan 9]
gi|235000413|gb|EEP49837.1| OmpA-family protein [Burkholderia pseudomallei MSHR346]
gi|238523774|gb|EEP87210.1| OmpA family protein [Burkholderia mallei GB8 horse 4]
gi|242135963|gb|EES22366.1| ompA family protein [Burkholderia pseudomallei 1106b]
gi|261827068|gb|ABM98527.2| ompA family protein [Burkholderia mallei NCTC 10229]
Length = 438
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 4/132 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ +++ ++ + F + S S+ + VL+ + L + + +
Sbjct: 292 EPEIAAGLVSVRDEADRSVIVLRGDGLFGSGSTSVIDRYMPVLTRVADALNQVQGNVRVS 351
Query: 87 GHADELGSRN----SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
G+ D+ S+ L RA AV + AR R+ G P
Sbjct: 352 GYTDDTPVHTARFASNWDLSRERAQAVRSLIAARLDRPERITAEGRGTLDPVAPNDSPAN 411
Query: 143 YAKNRRAIVFLK 154
A+NRR + L
Sbjct: 412 RARNRRVEITLM 423
>gi|332981443|ref|YP_004462884.1| OmpA/MotB domain-containing protein [Mahella australiensis 50-1
BON]
gi|332699121|gb|AEE96062.1| OmpA/MotB domain protein [Mahella australiensis 50-1 BON]
Length = 251
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 51/130 (39%), Gaps = 8/130 (6%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGH 88
+ + + + D+V F++ I P+ + VL+N+ L+ + IEGH
Sbjct: 107 AATVEMTENKMEILLRFKDNVLFESGKADIIPSALPVLNNIAGVLKTYKEQIGGVRIEGH 166
Query: 89 ADELGSR----NSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAY 143
D + S+ L RA V YFV R + YG+ P +
Sbjct: 167 TDNVPIHTVMFPSNWELSTARAVTVLRYFVERQHLPPEMLSAVGYGEYHPVATNDTIEGR 226
Query: 144 AKNRRAIVFL 153
AKNRR + +
Sbjct: 227 AKNRRVDIVI 236
>gi|315635918|ref|ZP_07891180.1| outer membrane fibronectin-binding protein [Arcobacter butzleri
JV22]
gi|315479897|gb|EFU70568.1| outer membrane fibronectin-binding protein [Arcobacter butzleri
JV22]
Length = 338
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 54/134 (40%), Gaps = 1/134 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-K 78
G +D+ P+T+ + V ++ FDT+ I+ + ++ ++
Sbjct: 202 GDGVIDSLDECPNTMKGAKVDNIGCMTLVNLNINFDTAKADIKDSYNSRINEFAKVMKAD 261
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
IE H D +G+ + L RRA + N VA G+ R+K YG+ P
Sbjct: 262 PKLKANIEAHTDSVGTDAYNQKLSERRATSAVNALVAAGVEKDRIKAVGYGESRPIASND 321
Query: 139 DEDAYAKNRRAIVF 152
+ A+NRR
Sbjct: 322 TVEGRAENRRVEAV 335
>gi|294341056|emb|CAZ89451.1| Peptidoglycan-associated lipoprotein precursor (19 kDa surface
antigen) (PPL) [Thiomonas sp. 3As]
Length = 182
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 1/135 (0%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LE 77
+G + + V + +V SV+F +SY++ VL+ ++ +
Sbjct: 45 AGANANGAGQNQVAAVQAPAETNAGPGPNVPKSVYFAFNSYTVESQYTPVLNANATYLTQ 104
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
++G+ D GSR ++ALG +RA AV G+ S+M+ SYGKE P G
Sbjct: 105 HPQAHVQLQGNTDARGSREYNLALGQKRADAVMKGMELLGVKPSQMEAISYGKEKPKALG 164
Query: 138 HDEDAYAKNRRAIVF 152
+ E YA+NRR +
Sbjct: 165 NTEADYAENRRVDIV 179
>gi|269137375|ref|YP_003294075.1| putative outer membrane lipoprotein [Edwardsiella tarda EIB202]
gi|267983035|gb|ACY82864.1| putative outer membrane lipoprotein [Edwardsiella tarda EIB202]
gi|304557476|gb|ADM40140.1| Outer membrane protein [Edwardsiella tarda FL6-60]
Length = 219
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD++S +++PA L+ + L+++ + G+ D
Sbjct: 94 GTGVSVTRQGDNIVLNMPNNVTFDSNSSNLKPAGANTLTGVAMVLKEYQKTAVNVVGYTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GSR+ ++ L +RA +V + + +G+SA R++ G P A+NRR
Sbjct: 154 STGSRDLNMRLSQQRADSVASALIVQGVSAGRIRTIGMGPANPIATNSTAAGKAQNRRVE 213
Query: 151 VFLK 154
+ L
Sbjct: 214 ITLS 217
>gi|262041860|ref|ZP_06015044.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259040765|gb|EEW41852.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 565
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 2/125 (1%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELG 93
+ + +Q + + FDT +++P ++L N L K ++ GH D +G
Sbjct: 417 VIKQVVQGPQTIRLDSMALFDTGKSALKPGSTKLLVNSLLGIKVKPGWLIVVAGHTDSIG 476
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ S+ L L+RA AV ++ G V YG P + A+NRR +
Sbjct: 477 NDRSNQQLSLKRAEAVRDWMRDTGDVPESCFAVQGYGASRPVASNETPEGRAQNRRVEIS 536
Query: 153 LKGCR 157
L +
Sbjct: 537 LVPQK 541
>gi|292490342|ref|YP_003525781.1| peptidoglycan-associated lipoprotein [Nitrosococcus halophilus Nc4]
gi|291578937|gb|ADE13394.1| peptidoglycan-associated lipoprotein [Nitrosococcus halophilus Nc4]
Length = 191
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/128 (32%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGH 88
L + S ++F+ S I+ D ++ G + + D +EGH
Sbjct: 64 GEGAAYQGDPLADPASPLANRVIYFEFDSSEIQEDDRPIVEAHGDYLAKHPDVSLTLEGH 123
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
DE GSR ++ALG RRA AV + G S +++V SYG+E P+V GHDE A+ NRR
Sbjct: 124 TDERGSREYNLALGERRANAVRRLVLLMGASEDQVQVVSYGEERPAVDGHDEGAWQLNRR 183
Query: 149 AIVFLKGC 156
+ G
Sbjct: 184 VEILYSGE 191
>gi|260886728|ref|ZP_05897991.1| chemotaxis protein MotB [Selenomonas sputigena ATCC 35185]
gi|330839448|ref|YP_004414028.1| OmpA/MotB domain protein [Selenomonas sputigena ATCC 35185]
gi|260863580|gb|EEX78080.1| chemotaxis protein MotB [Selenomonas sputigena ATCC 35185]
gi|329747212|gb|AEC00569.1| OmpA/MotB domain protein [Selenomonas sputigena ATCC 35185]
Length = 303
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 46/133 (34%), Gaps = 6/133 (4%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
K + LN + + + + F + S + ++ + L K +I
Sbjct: 109 KQNGLQGELNTTMTDDGLMIRIKEKALFPSGSAELVGEAQKIGPVVAGLLAKIPERVVIS 168
Query: 87 GHADELGS----RNSSIALGLRRAYAVFNYFVARGI--SASRMKVTSYGKEMPSVYGHDE 140
GH D + S+ L +RA + A + +R Y + P +
Sbjct: 169 GHTDNVPIATARYPSNWELSSQRALNFMKFLFASNTSLNPARFSSIGYSEYRPIADNKTD 228
Query: 141 DAYAKNRRAIVFL 153
+ ++NRR V +
Sbjct: 229 EGRSQNRRVEVLI 241
>gi|238893777|ref|YP_002918511.1| peptidoglycan-associated outer membrane lipoprotein [Klebsiella
pneumoniae NTUH-K2044]
gi|238546093|dbj|BAH62444.1| peptidoglycan-associated lipoprotein [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 182
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 55/173 (31%), Positives = 81/173 (46%), Gaps = 21/173 (12%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNL----------------DTKISSPDTVLNESSL 40
MQ + + I L + + + S N D + + E +
Sbjct: 9 MQLNKVLKGLMIALPVMAIAACSSNKNASNDQSGEGMLGAGTGMDANGNGGNMSSEEQAR 68
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSI 99
+ + V+FD Y IR +L ++L + +EGHADE G+ +I
Sbjct: 69 LQMQQLQQNNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADERGTPEYNI 128
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
ALG RRA AV Y +G+SA ++ + SYGKE P+V GHDE AYAKNRRA++
Sbjct: 129 ALGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYAKNRRAVLV 181
>gi|167916344|ref|ZP_02503435.1| hypothetical protein Bpse112_38087 [Burkholderia pseudomallei 112]
Length = 421
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 4/132 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ +++ ++ + F + S S+ + VL+ + L + + +
Sbjct: 275 EPEIAAGLVSVRDEADRSVIVLRGDGLFGSGSTSVIDRYMPVLTRVADALNQVQGNVRVS 334
Query: 87 GHADELGSRN----SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
G+ D+ S+ L RA AV + AR R+ G P
Sbjct: 335 GYTDDTPVHTARFASNWDLSRERAQAVRSLIAARLDRPERITAEGRGTLDPVAPNDSPAN 394
Query: 143 YAKNRRAIVFLK 154
A+NRR + L
Sbjct: 395 RARNRRVEITLM 406
>gi|74318813|ref|YP_316553.1| outer membrane protein [Thiobacillus denitrificans ATCC 25259]
gi|74058308|gb|AAZ98748.1| outer membrane protein [Thiobacillus denitrificans ATCC 25259]
Length = 266
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRA 106
V + V F ++RP + L L+ + + GH D GS ++ L RRA
Sbjct: 157 VLEDVNFAYDKATLRPEAREKLDQAVETLKGWGEGTVEVGGHTDSKGSEAYNMELSRRRA 216
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
AV Y + +GI A ++ +YG+ P ++ KNRR +
Sbjct: 217 EAVREYLIGKGIPAEQLVTKAYGESQPIADNGNDIGRFKNRRVELK 262
>gi|301047095|ref|ZP_07194195.1| OmpA family protein [Escherichia coli MS 185-1]
gi|300300982|gb|EFJ57367.1| OmpA family protein [Escherichia coli MS 185-1]
Length = 219
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD+SS +++PA L+ + L+++ + G+ D
Sbjct: 94 GTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANPLTGVAMVLKEYPKTAVNVIGYTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + ++ L +RA +V + + +G+ ASR++ G P + A+NRR
Sbjct: 154 STGGHDLNMRLSQQRADSVASALIPQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVE 213
Query: 151 VFLK 154
+ L
Sbjct: 214 ITLS 217
>gi|26987858|ref|NP_743283.1| OmpA/MotB domain protein [Pseudomonas putida KT2440]
gi|24982561|gb|AAN66747.1|AE016303_2 OmpA family protein [Pseudomonas putida KT2440]
Length = 264
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 1/106 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAY 107
+V F S + PA Q L L L + GH D +GS + + AL RRA
Sbjct: 158 NGAVMFAFDSAELTPAAQQRLQGLVEKLNSPTVAKVRVIGHTDSVGSDSYNQALSERRAS 217
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+V Y + +G+ ++ G+ P E+ A+NRR + L
Sbjct: 218 SVAEYLIGQGLEMGKVTSQGRGESEPVTDNETEEGRARNRRVELHL 263
>gi|89895779|ref|YP_519266.1| hypothetical protein DSY3033 [Desulfitobacterium hafniense Y51]
gi|89335227|dbj|BAE84822.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 275
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 55/132 (41%), Gaps = 5/132 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+T L S + S+ D++ F++ + I P ++L + + L +EGH D
Sbjct: 125 ETKLVSSIEERGLVISIQDTLLFESGAAVITPKAREILDKINNVLASAPNYIKVEGHTDN 184
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
L S+ L + RA V + I A ++ T YG+ P E A+NR
Sbjct: 185 LPINTNRFPSNWELSVLRATNVVHIMQE-IIPAEQLSATGYGEYRPLAANDTEAGRARNR 243
Query: 148 RAIVFLKGCRAN 159
R + + + +
Sbjct: 244 RVDLVILRSKYD 255
>gi|308063911|gb|ADO05798.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
Sat464]
Length = 179
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 24/177 (13%)
Query: 1 MQYSTIFIILSAITMMSIS-------------GIDNLDTKISSPDTVLNESSLQEQFSS- 46
M+ S++F L A ++ + + S +TV + +++ +
Sbjct: 1 MKRSSVFSFLVAFLFIAGCKHNMNKETVAGDVSAKAVQSAPVSTETVQEKQEPKQEPAPV 60
Query: 47 ----------SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRN 96
++ S++FD Y I+ +D + L + +++ L+EG+ DE GS
Sbjct: 61 VEKKPAIESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEFGSSE 120
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ ALG++R +V N + +G+ +K S+G+ P ++ Y +NRR V L
Sbjct: 121 YNQALGVKRTLSVKNALIIKGVEKDMIKTISFGETKPKCTQKTKECYKENRRVDVKL 177
>gi|300704849|ref|YP_003746452.1| peptidoglycaN-associated lipoprotein, protein pal, component of
tol-pal system [Ralstonia solanacearum CFBP2957]
gi|299072513|emb|CBJ43863.1| Peptidoglycan-associated lipoprotein, protein pal, component of
tol-pal system [Ralstonia solanacearum CFBP2957]
Length = 172
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/137 (31%), Positives = 72/137 (52%), Gaps = 5/137 (3%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+ +G D + + L + S SV+FD SY+++ +LS +L
Sbjct: 39 AATGADTRNVTPVD----VTRDELTDPNSPLAKRSVYFDFDSYTVKSEYQGLLSQHARYL 94
Query: 77 EKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+ H LI+G+ DE G+ ++ALG +RA AV ++G+ S+M+ S GKE P
Sbjct: 95 QSHNQRKVLIQGNTDERGTSEYNLALGQKRAEAVRRALSSQGVPDSQMEAVSLGKEKPQA 154
Query: 136 YGHDEDAYAKNRRAIVF 152
GHDE+++A+NRR+ +
Sbjct: 155 TGHDEESWAQNRRSDIV 171
>gi|88799579|ref|ZP_01115155.1| Flagellar motor protein [Reinekea sp. MED297]
gi|88777664|gb|EAR08863.1| Flagellar motor protein [Reinekea sp. MED297]
Length = 319
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 46/129 (35%), Gaps = 6/129 (4%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
+ +L ++ E V + F S + + VL + L D +EGH D
Sbjct: 156 AEGMLQIETVNETIIIRVKEQSFTG-GSDYVADEFLPVLDKVRELLVTTPGDIWVEGHTD 214
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAK 145
+ ++ L RA +V Y A R + +G P + A+
Sbjct: 215 NVPIATSQFRNNWLLSAARALSVAEYLFIAPEMAEERFTIVGHGSTKPIASNETPEGRAQ 274
Query: 146 NRRAIVFLK 154
NRR + +K
Sbjct: 275 NRRVEIIIK 283
>gi|323495404|ref|ZP_08100481.1| outer membrane protein OmpA [Vibrio brasiliensis LMG 20546]
gi|323310327|gb|EGA63514.1| outer membrane protein OmpA [Vibrio brasiliensis LMG 20546]
Length = 324
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIA 100
+ F + + + F+ +S ++P L L +L + + G+ D G+ +
Sbjct: 203 KTFETQLLGTGSFELNSTQLKPESASQLDELVEFLNTYPQAKVEVIGYTDSSGAAEYNQV 262
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +RA +V + +GI ASR+ G+ P + +NRR V +
Sbjct: 263 VSEKRAESVASTLEQKGIDASRITARGEGENNPVASNDTREGRQQNRRVEVIV 315
>gi|319796493|ref|YP_004158133.1| ompa/motb domain protein [Variovorax paradoxus EPS]
gi|315598956|gb|ADU40022.1| OmpA/MotB domain protein [Variovorax paradoxus EPS]
Length = 219
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 57/142 (40%), Gaps = 3/142 (2%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
+ V + + ++ V FD +I+P VL S
Sbjct: 78 NQKRQMEAATQGTGVAVTQTQNNELKLAIPSDVSFDVGRANIKPNFAPVLDQFASGLRNN 137
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ + I GH D GS + L + RA + +Y VARG++A+ ++ G P +
Sbjct: 138 PNAEVRIIGHTDSTGSDAINNPLSVDRAASTRDYLVARGVNAAAFRIEGRGSHEPVADNN 197
Query: 139 DEDAYAKNRRAIVFL--KGCRA 158
+ A+NRR +++ +G R
Sbjct: 198 SDAGRAQNRRVEIYVGERGPRG 219
>gi|110638537|ref|YP_678746.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
gi|110281218|gb|ABG59404.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
Length = 510
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
+ ++F+TS Y + P L + E IEGH D G+ + ++ L RA +
Sbjct: 403 NHIYFETSKYDLLPESYYELDKVVKLLRENPKMKIEIEGHTDNQGNADKNMILSQNRAKS 462
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V +Y +++GI+A R+ +G P V + NRR +
Sbjct: 463 VMDYIISKGITADRITSKGFGITKPMVDNDTPENRQLNRRVEFTI 507
>gi|77457796|ref|YP_347301.1| flagellar motor protein MotD [Pseudomonas fluorescens Pf0-1]
gi|77381799|gb|ABA73312.1| putative chemotaxis protein [Pseudomonas fluorescens Pf0-1]
Length = 296
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 43/115 (37%), Gaps = 4/115 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ S+ F + ++ + + L+ D +EG D+ ++
Sbjct: 129 VEIELNSSLLFGSGDAMPSDIAFNIIDKVAAILKPFDNPIHVEGFTDDQPIRTAQYPTNW 188
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L R+ ++ +G++ R+ YG+ P + AKNRR ++ +
Sbjct: 189 ELSSARSASIVRMLAMQGVNPGRLASVGYGEFQPVANNATAEGRAKNRRVVLVVS 243
>gi|110639098|ref|YP_679307.1| peptidoglycan-associated lipoprotein [Cytophaga hutchinsonii ATCC
33406]
gi|110281779|gb|ABG59965.1| peptidoglycan-associated lipoprotein [Cytophaga hutchinsonii ATCC
33406]
Length = 673
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRA 106
V +++FD +++ A + L+NL L+++ + I GH D GS + L +RA
Sbjct: 563 VLRNIYFDFDKATLKSASNKELNNLLQLLKQNPEMEIEISGHTDSKGSDEYNRVLSRKRA 622
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE-DAYAKNRRAIVFL 153
AV N+ V++GIS +R+K YG+ P DE + NRR +
Sbjct: 623 QAVVNWLVSKGISKNRLKFEGYGESRPLASNDDELEGRELNRRTEFKI 670
>gi|309388829|gb|ADO76709.1| OmpA/MotB domain protein [Halanaerobium praevalens DSM 2228]
Length = 282
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 54/131 (41%), Gaps = 5/131 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+N + ++ S+ + ++ IR +VL+ + L++ D +IEGH D+
Sbjct: 108 SDKVNVENKRKGLVISLTGEILYELGKADIREQGKEVLTKISEILKEIPNDIMIEGHTDD 167
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
L S+ L RA V Y + + +R+ Y + P + + A+N
Sbjct: 168 LPIRTAEFPSNWELSTARAVNVIKYLIEEKDFDPARLSAAGYSEYRPVATNNSTEGRAEN 227
Query: 147 RRAIVFLKGCR 157
RR V + +
Sbjct: 228 RRVEVVVLNSQ 238
>gi|145588679|ref|YP_001155276.1| OmpA/MotB domain-containing protein [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
gi|145047085|gb|ABP33712.1| OmpA/MotB domain protein [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 187
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 1/126 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHAD 90
+ ++ Q ++ +D + ++P L + + L K + +I G+ D
Sbjct: 60 GALTAAAAGVSQSKITLQADTLYDFNKSDLKPEGKATLDKIAADLSKIKLEVIIAVGNTD 119
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
+G+ ++ALG RRA +V Y V++G+ ASR+ S GK P + AKNRR
Sbjct: 120 SVGTDAYNMALGQRRAQSVKTYLVSKGVDASRIYTESKGKSNPVASNATAEGRAKNRRTD 179
Query: 151 VFLKGC 156
+ + G
Sbjct: 180 IEVVGT 185
>gi|329904710|ref|ZP_08273911.1| Flagellar motor rotation protein MotB [Oxalobacteraceae bacterium
IMCC9480]
gi|327547854|gb|EGF32612.1| Flagellar motor rotation protein MotB [Oxalobacteraceae bacterium
IMCC9480]
Length = 270
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 43/121 (35%), Gaps = 4/121 (3%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE----L 92
+ S + SV F S+ LS + L + IEGH D
Sbjct: 131 VTQTSRGVSIEINASVLFAPGEASLTNESGAALSAIAQVLSQDTHAIQIEGHTDNLPIGN 190
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ S+ L RA +V F GI+ +R+ +G P + +NRR V
Sbjct: 191 ATFPSNWELSSVRASSVVRLFSNNGIAENRLTAVGHGSNKPVGSNDTPEGRVRNRRVEVL 250
Query: 153 L 153
+
Sbjct: 251 I 251
>gi|317177876|dbj|BAJ55665.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
F16]
Length = 179
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/177 (24%), Positives = 73/177 (41%), Gaps = 24/177 (13%)
Query: 1 MQYSTIFIILSAITMMSIS----------GIDNLDTKISSPDTVLNESSLQEQFSSSVG- 49
M+ S++F L A ++ G + T S+P + QE
Sbjct: 1 MKRSSVFSFLVAFLFIAGCKHNMDKETVAGDVSAKTVQSAPVSTETAQEKQEPKQEPAPV 60
Query: 50 -------------DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRN 96
S++FD Y I+ +D + L + +++ L+EG+ DE GS
Sbjct: 61 VEEKPAVESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEFGSSE 120
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ ALG++R +V N V +G+ +K S+G+ P + Y +NRR V L
Sbjct: 121 YNQALGVKRTLSVKNALVIKGVEKDMIKTISFGETKPKCTQKTRECYKENRRVDVKL 177
>gi|295836759|ref|ZP_06823692.1| secreted protein [Streptomyces sp. SPB74]
gi|295826190|gb|EFG64725.1| secreted protein [Streptomyces sp. SPB74]
Length = 204
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 47/137 (34%), Gaps = 1/137 (0%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
++ + + ++ + + ++ V FD +++ P+ + +
Sbjct: 62 LAPAKVLDIKSVVEDLGGEERREDTNTDVKIALQAEVLFDKDKFALDPSGRSRIEAIADE 121
Query: 76 LEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
+K + G D LGS L RRA V + +V Y ++ P
Sbjct: 122 AKKQRARTVRVFGFTDNLGSYAHGKTLSKRRADIVHDELAPHLGPEVTFEVRGYSEDYPI 181
Query: 135 VYGHDEDAYAKNRRAIV 151
E+ KNRR +
Sbjct: 182 ADNTTEEGRRKNRRVEI 198
>gi|167002401|ref|ZP_02268191.1| ompA family protein [Burkholderia mallei PRL-20]
gi|243061889|gb|EES44075.1| ompA family protein [Burkholderia mallei PRL-20]
Length = 438
Score = 79.5 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 4/132 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ +++ ++ + F + S S+ + VL+ + L + + +
Sbjct: 292 EPEIAAGLVSVRDEADRSVIVLRGDGLFGSGSTSVIDRYMPVLTRVADALNQVQGNVRVS 351
Query: 87 GHADELGSRN----SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
G+ D+ S+ L RA AV + AR R+ G P
Sbjct: 352 GYTDDTPVHTARFASNWDLSRERAQAVRSLIAARLDRPERITAEGRGTLDPVAPNDSPAN 411
Query: 143 YAKNRRAIVFLK 154
A+NRR + L
Sbjct: 412 RARNRRVEITLM 423
>gi|330899613|gb|EGH31032.1| OmpA/MotB [Pseudomonas syringae pv. japonica str. M301072PT]
Length = 133
Score = 79.5 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 1/125 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHA 89
+T + +Q + ++ F T S +I + L+NL S + + + I G+
Sbjct: 2 ANTGVEVQRQGDQIKLIMPGNITFATDSSAIASSFYSPLNNLASSLKQFNQNNIEIVGYT 61
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GSR ++ L +RA +V Y ++G+ + + V G + P D + A+NRR
Sbjct: 62 DSTGSRQHNMDLSQQRAQSVATYLTSQGVDQAHLSVRGAGPDQPIASNADVNGRAQNRRV 121
Query: 150 IVFLK 154
V LK
Sbjct: 122 EVNLK 126
>gi|168334555|ref|ZP_02692711.1| flagellar motor protein [Epulopiscium sp. 'N.t. morphotype B']
Length = 251
Score = 79.5 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 8/135 (5%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI- 85
K D + E+ + D + FD+ I+P ++VL +G+ ++++ D I
Sbjct: 111 KSEGLDNKVTVEQDGEEVVLTFEDFMLFDSGLAVIKPDGLEVLGKIGNEIKQYLEDDYIA 170
Query: 86 --EGHADELGS----RNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGH 138
EGH D L S+ L RA +V Y + IS R+ +G+ P
Sbjct: 171 RAEGHTDNLPINSLIFPSNWELSASRAISVAKYLINDIGISPMRISAEGFGEFYPIATND 230
Query: 139 DEDAYAKNRRAIVFL 153
+ A+NRR + +
Sbjct: 231 TPEGRAQNRRVEIKI 245
>gi|91215766|ref|ZP_01252736.1| OmpA family protein [Psychroflexus torquis ATCC 700755]
gi|91186232|gb|EAS72605.1| OmpA family protein [Psychroflexus torquis ATCC 700755]
Length = 231
Score = 79.5 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 3/135 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDS--VFFDTSSYSIRPADI-QVLSNLGSWLEK 78
D +I + + E + + ++ V+F T+ +I +L +G + +
Sbjct: 82 DKQAKEIEEEIPGAEVTRVGEGINVTFDENSGVYFTTNKSNIEGKSEISLLKLIGIFQKY 141
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ ++EGH D GS + ++ L RRA +V +Y GIS+SR+K YG+E P
Sbjct: 142 PKTNIIVEGHTDSTGSDSYNMDLSKRRAQSVTDYLSNNGISSSRIKTNWYGEEQPKFDNT 201
Query: 139 DEDAYAKNRRAIVFL 153
+ +KNRR + +
Sbjct: 202 SPEERSKNRRVELAI 216
>gi|107021874|ref|YP_620201.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
gi|116688822|ref|YP_834445.1| OmpA-like protein [Burkholderia cenocepacia HI2424]
gi|170732121|ref|YP_001764068.1| peptidoglycan-associated lipoprotein [Burkholderia cenocepacia
MC0-3]
gi|206561548|ref|YP_002232313.1| putative OmpA family lipoprotein [Burkholderia cenocepacia J2315]
gi|105892063|gb|ABF75228.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
gi|116646911|gb|ABK07552.1| OmpA-like protein [Burkholderia cenocepacia HI2424]
gi|169815363|gb|ACA89946.1| peptidoglycan-associated lipoprotein [Burkholderia cenocepacia
MC0-3]
gi|198037590|emb|CAR53528.1| putative OmpA family lipoprotein [Burkholderia cenocepacia J2315]
Length = 170
Score = 79.5 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 77/167 (46%), Gaps = 15/167 (8%)
Query: 1 MQYSTIFIILSAITMMSISGIDN--------------LDTKISSPDTVLNESSLQEQFSS 46
M + + L+ + + +++ + + +N L + S
Sbjct: 1 MMSNKARLALAVMMISALAACKSGVKLDDKANNAGAVSTQPSADNVAQVNVDPLNDPNSP 60
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRR 105
S++FD SYS++ ++ +L+ H LI+G+ DE G+ ++ALG +R
Sbjct: 61 LAKRSIYFDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNTDERGTSEYNLALGQKR 120
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
A AV G++ S+M+ S GKE P GHDE ++A+NRRA +
Sbjct: 121 AEAVRRAMALLGVNDSQMEAVSLGKEKPQATGHDEASWAQNRRADLV 167
>gi|325523338|gb|EGD01688.1| Outer membrane protein [Burkholderia sp. TJI49]
Length = 552
Score = 79.5 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FD+ ++P + + ++ H L+ G+ D +G +S++ L + RA AV +
Sbjct: 444 LFDSGKAQLKPDSTRAMVGALEMIKTHPDKRILVAGYTDNVGHPDSNLKLSVARAQAVRD 503
Query: 112 YFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ + ++ + YG P + A+NRR + L
Sbjct: 504 WLIEASGIPATQFAIQGYGDTRPIADNDTPEGRARNRRVEITL 546
>gi|312959042|ref|ZP_07773561.1| OmpA/MotB [Pseudomonas fluorescens WH6]
gi|311286812|gb|EFQ65374.1| OmpA/MotB [Pseudomonas fluorescens WH6]
Length = 256
Score = 79.5 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 60/131 (45%), Gaps = 1/131 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
+ S +T + +Q + ++ F T+S +I + Q L+NL + + +
Sbjct: 91 QEKKLRESMANTGVEVQRQGDQIKLIMPGNITFATNSDAISSSFYQPLNNLANSLKQFNQ 150
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
I G+ D GSR ++ L RRA +V NY ++G++ + + G + P D
Sbjct: 151 NTIQIVGYTDSTGSRQLNMDLSQRRAQSVANYLTSQGVNGANLSARGAGPDNPIASNADV 210
Query: 141 DAYAKNRRAIV 151
+ A+NRR V
Sbjct: 211 NGRAQNRRVEV 221
>gi|311277523|ref|YP_003939754.1| OmpA/MotB domain-containing protein [Enterobacter cloacae SCF1]
gi|308746718|gb|ADO46470.1| OmpA/MotB domain protein [Enterobacter cloacae SCF1]
Length = 220
Score = 79.5 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 69/135 (51%), Gaps = 1/135 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
+ + T ++ + + ++ ++V FD+SS +++PA L+ + L++++
Sbjct: 83 VQEAKLRQKMQGTGVSVTRSGDNIILNMPNNVTFDSSSANLKPAGANTLTGVAMVLKEYE 142
Query: 81 CD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ G+ D GS++ ++ L +RA +V + + +G++A+R++ T G+ P
Sbjct: 143 KTAVNVVGYTDSTGSKDLNMRLSQQRADSVASSLITQGVAANRIRTTGMGQANPIASNST 202
Query: 140 EDAYAKNRRAIVFLK 154
+ A+NRR + L
Sbjct: 203 AEGKAQNRRVEITLS 217
>gi|184157492|ref|YP_001845831.1| outer membrane protein [Acinetobacter baumannii ACICU]
gi|332872459|ref|ZP_08440430.1| OmpA family protein [Acinetobacter baumannii 6014059]
gi|183209086|gb|ACC56484.1| Outer membrane protein [Acinetobacter baumannii ACICU]
gi|332739345|gb|EGJ70201.1| OmpA family protein [Acinetobacter baumannii 6014059]
Length = 471
Score = 79.5 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 61/148 (41%), Gaps = 2/148 (1%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG-DSVFFDTSSYSIRPADI 66
++ +A S ++L ++ + + ++ + F + S I +
Sbjct: 322 VVAAAPETAEQSVSNSLSASQTALTAIDPNNVDVNALVKALNLQIINFASGSSDIPADNK 381
Query: 67 QVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
+L + + + GH D G+ ++ AL RRA AV +Y V++G+ AS++
Sbjct: 382 AILDQAATLLNKVSGVKLDVGGHTDSTGNAAANKALSQRRAQAVVDYLVSKGVDASKLVA 441
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+G E P E+ KNRR +
Sbjct: 442 KGHGSEQPVADNTTEEGRFKNRRIEFSV 469
>gi|152969309|ref|YP_001334418.1| peptidoglycan-associated outer membrane lipoprotein [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|206576207|ref|YP_002239637.1| peptidoglycan-associated lipoprotein [Klebsiella pneumoniae 342]
gi|288936478|ref|YP_003440537.1| peptidoglycan-associated lipoprotein [Klebsiella variicola At-22]
gi|290510465|ref|ZP_06549835.1| peptidoglycan-associated lipoprotein [Klebsiella sp. 1_1_55]
gi|329998743|ref|ZP_08303197.1| peptidoglycan-associated lipoprotein [Klebsiella sp. MS 92-3]
gi|150954158|gb|ABR76188.1| peptidoglycan-associated lipoprotein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|206565265|gb|ACI07041.1| peptidoglycan-associated lipoprotein [Klebsiella pneumoniae 342]
gi|288891187|gb|ADC59505.1| peptidoglycan-associated lipoprotein [Klebsiella variicola At-22]
gi|289777181|gb|EFD85179.1| peptidoglycan-associated lipoprotein [Klebsiella sp. 1_1_55]
gi|328538570|gb|EGF64674.1| peptidoglycan-associated lipoprotein [Klebsiella sp. MS 92-3]
Length = 174
Score = 79.5 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 55/173 (31%), Positives = 81/173 (46%), Gaps = 21/173 (12%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNL----------------DTKISSPDTVLNESSL 40
MQ + + I L + + + S N D + + E +
Sbjct: 1 MQLNKVLKGLMIALPVMAIAACSSNKNASNDQSGEGMLGAGTGMDANGNGGNMSSEEQAR 60
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSI 99
+ + V+FD Y IR +L ++L + +EGHADE G+ +I
Sbjct: 61 LQMQQLQQNNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADERGTPEYNI 120
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
ALG RRA AV Y +G+SA ++ + SYGKE P+V GHDE AYAKNRRA++
Sbjct: 121 ALGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYAKNRRAVLV 173
>gi|24375456|ref|NP_719499.1| OmpA family protein [Shewanella oneidensis MR-1]
gi|24350304|gb|AAN56943.1|AE015827_15 OmpA family protein [Shewanella oneidensis MR-1]
Length = 228
Score = 79.5 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH- 79
+ + T ++ + + ++ + V F + +VL+++ +++
Sbjct: 91 VQETKLRQQLASTGVSVTRSGDNIILNMPNEVTFGVDQTELSDGAKRVLNSVALVAKEYS 150
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ G+ D GS + ++ L RA V NY +++G++++R+K G+ P +
Sbjct: 151 KTQLNVLGYTDSSGSDSYNLRLSQVRASEVGNYLMSKGVASARVKSKGMGEASPIASNAN 210
Query: 140 EDAYAKNRRAIVFL 153
+ A+NRR + L
Sbjct: 211 AEGRAQNRRVEIVL 224
>gi|32491160|ref|NP_871414.1| hypothetical protein WGLp411 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|25166367|dbj|BAC24557.1| pal [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 170
Score = 79.5 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 17/169 (10%)
Query: 1 MQY----STIFIILSAITMMSISG------------IDNLDTKISSPDTVLNESSLQEQF 44
M+ +I + + I+M+S + + +T + + + S L
Sbjct: 1 MKLNLFLKSIVLSIPLISMISCTSKKQVKNIDEPVISSSENTDSNVNNIMPEGSELSNSQ 60
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGL 103
+ V+FD Y ++ Q+L +L+ + +IEGHADE G+ +IALG
Sbjct: 61 ELQQNNIVYFDLDKYVVKDEFTQILDAHSDFLKNNPSYKIVIEGHADERGTSEYNIALGE 120
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
RRA +V Y ++G+ +MKV SYGKE P++ GHDE YAKNRR ++
Sbjct: 121 RRAKSVKIYLQSKGVLDDQMKVISYGKEKPAILGHDETTYAKNRRVVLT 169
>gi|302521646|ref|ZP_07273988.1| secreted protein [Streptomyces sp. SPB78]
gi|302430541|gb|EFL02357.1| secreted protein [Streptomyces sp. SPB78]
Length = 205
Score = 79.5 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 50/143 (34%), Gaps = 1/143 (0%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVL 69
L+ ++ + + ++ + + ++ V FD +++ P+ +
Sbjct: 57 LADGAQLASAKVLDIKSVVEDLGGEERREDTNTDVKFALQAEVLFDKDKFALDPSGRARI 116
Query: 70 SNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
+G +K + G D LGS L RRA V + +V Y
Sbjct: 117 KAIGEEAKKQRARTVRVFGFTDNLGSYAHGKTLSKRRADIVHDELAQYLGPEVTFEVRGY 176
Query: 129 GKEMPSVYGHDEDAYAKNRRAIV 151
++ P E+ KNRR V
Sbjct: 177 SEDYPIADNTTEEGRRKNRRVEV 199
>gi|207728190|ref|YP_002256584.1| peptidoglycan-associated lipoprotein precursor [Ralstonia
solanacearum MolK2]
gi|206591435|emb|CAQ57047.1| peptidoglycan-associated lipoprotein precursor [Ralstonia
solanacearum MolK2]
Length = 172
Score = 79.5 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/137 (30%), Positives = 71/137 (51%), Gaps = 5/137 (3%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+ +G D + + L + S SV+FD SY+++ +L +L
Sbjct: 39 AATGADTRNVTPVD----VTRDELTDPNSPLAKRSVYFDFDSYTVKSEYQGLLGQHARYL 94
Query: 77 EKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+ H LI+G+ DE G+ ++ALG +RA AV ++G+ S+M+ S GKE P
Sbjct: 95 QSHNQRKVLIQGNTDERGTSEYNLALGQKRAEAVRRALSSQGVPDSQMEAVSLGKEKPQA 154
Query: 136 YGHDEDAYAKNRRAIVF 152
GHDE+++A+NRR+ +
Sbjct: 155 TGHDEESWAQNRRSDIV 171
>gi|169796598|ref|YP_001714391.1| hypothetical protein ABAYE2575 [Acinetobacter baumannii AYE]
gi|215484059|ref|YP_002326284.1| OmpA family protein [Acinetobacter baumannii AB307-0294]
gi|301344741|ref|ZP_07225482.1| OmpA family protein [Acinetobacter baumannii AB056]
gi|301510762|ref|ZP_07235999.1| OmpA family protein [Acinetobacter baumannii AB058]
gi|301595171|ref|ZP_07240179.1| OmpA family protein [Acinetobacter baumannii AB059]
gi|332853538|ref|ZP_08434802.1| OmpA family protein [Acinetobacter baumannii 6013150]
gi|332868403|ref|ZP_08438134.1| OmpA family protein [Acinetobacter baumannii 6013113]
gi|169149525|emb|CAM87414.1| conserved hypothetical protein; putative bacterial outer membrane
domain [Acinetobacter baumannii AYE]
gi|213987872|gb|ACJ58171.1| OmpA family protein [Acinetobacter baumannii AB307-0294]
gi|332728571|gb|EGJ59943.1| OmpA family protein [Acinetobacter baumannii 6013150]
gi|332733402|gb|EGJ64585.1| OmpA family protein [Acinetobacter baumannii 6013113]
Length = 471
Score = 79.5 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 61/148 (41%), Gaps = 2/148 (1%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG-DSVFFDTSSYSIRPADI 66
++ +A S ++L ++ + + ++ + F + S I +
Sbjct: 322 VVAAAPETAEQSVSNSLSASQTALTAIDPNNVDVNALVKALNLQIINFASGSSDIPADNK 381
Query: 67 QVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
+L + + + GH D G+ ++ AL RRA AV +Y V++G+ AS++
Sbjct: 382 AILDQAATLLNKVTGVKLDVGGHTDSTGNAAANKALSQRRAQAVVDYLVSKGVDASKLVA 441
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+G E P E+ KNRR +
Sbjct: 442 KGHGSEQPVADNTTEEGRFKNRRIEFSV 469
>gi|152984991|ref|YP_001349219.1| flagellar motor protein MotD [Pseudomonas aeruginosa PA7]
gi|150960149|gb|ABR82174.1| probable chemotaxis protein [Pseudomonas aeruginosa PA7]
Length = 296
Score = 79.5 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 45/128 (35%), Gaps = 4/128 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
L+ + ++ S+ F + A ++ + L + +EG D
Sbjct: 114 ASDQLSVRGNELWIEITLNSSLLFPSGDALPNDAAFGIVEKVAKILAPYKNPIHVEGFTD 173
Query: 91 ELGSR----NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
++ ++ L RA ++ G+ SRM YG+ P AKN
Sbjct: 174 DVPIHSQRYPTNWELSAARAASIVRLLGNDGVEPSRMAAVGYGEFQPVADNASAAGRAKN 233
Query: 147 RRAIVFLK 154
RR ++ +
Sbjct: 234 RRVVLVIS 241
>gi|314916069|gb|EFS79900.1| OmpA family protein [Propionibacterium acnes HL005PA4]
Length = 368
Score = 79.5 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 49/136 (36%), Gaps = 2/136 (1%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW--LEK 78
++ L T E +E + SV FD S ++PA Q++ K
Sbjct: 231 VNALVTTTGDASDASRERVTKESMKIDLDASVLFDLDSDVVKPAGRQIIDRTAKQLVARK 290
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ G+ D GS + ++ L RRA +V ++ + G+ P
Sbjct: 291 VSGKIEVTGYTDSSGSASHNLDLSRRRAASVAKVLGSQLSKGITLVTAGKGEADPVTSND 350
Query: 139 DEDAYAKNRRAIVFLK 154
E NRR + +K
Sbjct: 351 SEAGRRLNRRVTITVK 366
>gi|127512457|ref|YP_001093654.1| OmpA domain-containing protein [Shewanella loihica PV-4]
gi|126637752|gb|ABO23395.1| OmpA domain protein [Shewanella loihica PV-4]
Length = 180
Score = 79.5 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 51/179 (28%), Positives = 79/179 (44%), Gaps = 27/179 (15%)
Query: 1 MQYSTIF---------IILSAITMMSISGIDNL-----------------DTKISSPDTV 34
M + +F + +SA + S S D +T +P
Sbjct: 1 MDLNKLFKAMVVALPIMAISACSSTSESQTDATSSMSGSESSEMNAGGGVETGGVAPILT 60
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELG 93
E + ++FD S+ +VL+ G +L E + +IEGHADE G
Sbjct: 61 PEEQQRIKYQELRKEHIIYFDFDRSSVSSDFSEVLNAHGEYLLEHPNVRVMIEGHADERG 120
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ +IALG RRA AV Y + G+ S+M + SYG+E P + +D +AKNRRA++
Sbjct: 121 TPEYNIALGERRAKAVAKYLQSMGVLPSQMSIVSYGEEKPQDFSRTDDGFAKNRRAVLV 179
>gi|71066157|ref|YP_264884.1| outer membrane protein OprF [Psychrobacter arcticus 273-4]
gi|71039142|gb|AAZ19450.1| outer membrane protein OprF, OmpA/OmpF family [Psychrobacter
arcticus 273-4]
Length = 240
Score = 79.5 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 54/143 (37%), Gaps = 2/143 (1%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
++ + + + + + + + + +V FD + I+ VL +
Sbjct: 94 VLLDCNVSKSAPIPTLLQEPIAITTVGKPEIKNRAQFNVLFDFDNAGIKSKHSAVLRGMT 153
Query: 74 SWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKE 131
++++ +EGH D G + + L R V N V + + A R+ YG+
Sbjct: 154 NFIQAYPQIAVTLEGHTDNKGPESYHLKLSESRVNMVKNILVDKYGVDAMRLSTVGYGET 213
Query: 132 MPSVYGHDEDAYAKNRRAIVFLK 154
MP + E NRR + +
Sbjct: 214 MPVDSNNTEKGRQNNRRVVAIVS 236
>gi|325106387|ref|YP_004276041.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
gi|324975235|gb|ADY54219.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
Length = 666
Score = 79.5 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 6/112 (5%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
V ++++ + + P Q L L ++ + H D +GS ++ L RRA
Sbjct: 552 VLKDIYYEFNKAELTPMSAQALDILADIMMDNPKITIELSSHTDGIGSDAYNLDLSQRRA 611
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYG-----HDEDAYAKNRRAIVFL 153
+ +Y +A+GISA +++ YGK MP + + A NRR +
Sbjct: 612 QSCVDYLIAKGISAGKIQAKGYGKSMPIAPNTINGKDNPEGRALNRRTEFKV 663
>gi|317051743|ref|YP_004112859.1| peptidoglycan-associated lipoprotein [Desulfurispirillum indicum
S5]
gi|316946827|gb|ADU66303.1| peptidoglycan-associated lipoprotein [Desulfurispirillum indicum
S5]
Length = 187
Score = 79.5 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 49/182 (26%), Positives = 73/182 (40%), Gaps = 31/182 (17%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQE------------------- 42
++ +F +L+ + + G I V + +
Sbjct: 3 KFKGLFALLAGMIFLVAVGCAPQQVVIEDDAAVSEPTVSETTTPTETTTAPEMQIEDREQ 62
Query: 43 -----------QFSSSVGDSVFFDTSSYSIRPADIQVL-SNLGSWLEKHDCDFLIEGHAD 90
+ +V FD SIRP +VL +N+ + +IEGH D
Sbjct: 63 YAFTSPVLGKIYLDGTELYTVHFDFDRSSIRPDARKVLDNNIAYLKNNPNARIVIEGHCD 122
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
E GS + ++ALG RRA +V +Y V GI ASR+ SYGKE P +E A+ KNRR
Sbjct: 123 ERGSSDYNLALGDRRAQSVKDYLVTGGIDASRLTTISYGKERPVDPRSNEWAWQKNRRGE 182
Query: 151 VF 152
Sbjct: 183 FV 184
>gi|239503512|ref|ZP_04662822.1| OmpA family protein [Acinetobacter baumannii AB900]
Length = 471
Score = 79.5 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 61/148 (41%), Gaps = 2/148 (1%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG-DSVFFDTSSYSIRPADI 66
++ +A S ++L ++ + + ++ + F + S I +
Sbjct: 322 VVAAAPETAEQSVSNSLSASQTALTAIDPNNVDVNALVKALNLQIINFASGSSDIPADNK 381
Query: 67 QVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
+L + + + GH D G+ ++ AL RRA AV +Y V++G+ AS++
Sbjct: 382 AILDQAATLLNKVSGVKLDVGGHTDSTGNAAANKALSQRRAQAVVDYLVSKGVDASKLVA 441
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+G E P E+ KNRR +
Sbjct: 442 KGHGSEQPVADNTTEEGRFKNRRIEFSV 469
>gi|74314194|ref|YP_312613.1| putative outer membrane lipoprotein [Shigella sonnei Ss046]
gi|73857671|gb|AAZ90378.1| putative outer membrane protein [Shigella sonnei Ss046]
gi|323166955|gb|EFZ52694.1| inner membrane lipoprotein yiaD [Shigella sonnei 53G]
Length = 219
Score = 79.5 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD+SS +++PA L+ + L ++ + G+ D
Sbjct: 94 GTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLTEYPKTAVNVIGYTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + ++ L +RA +V + + +G+ ASR++ G P + A+NRR
Sbjct: 154 STGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVE 213
Query: 151 VFLK 154
+ L
Sbjct: 214 ITLS 217
>gi|76817452|ref|YP_336363.1| hypothetical protein BURPS1710b_A1205 [Burkholderia pseudomallei
1710b]
gi|134278396|ref|ZP_01765110.1| ompA family protein [Burkholderia pseudomallei 305]
gi|167924203|ref|ZP_02511294.1| hypothetical protein BpseBC_36953 [Burkholderia pseudomallei
BCC215]
gi|217422136|ref|ZP_03453639.1| ompA family protein [Burkholderia pseudomallei 576]
gi|254185740|ref|ZP_04892258.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237]
gi|254263509|ref|ZP_04954374.1| ompA family protein [Burkholderia pseudomallei 1710a]
gi|76581925|gb|ABA51399.1| ompA family protein [Burkholderia pseudomallei 1710b]
gi|134250180|gb|EBA50260.1| ompA family protein [Burkholderia pseudomallei 305]
gi|157933426|gb|EDO89096.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237]
gi|217394367|gb|EEC34386.1| ompA family protein [Burkholderia pseudomallei 576]
gi|254214511|gb|EET03896.1| ompA family protein [Burkholderia pseudomallei 1710a]
Length = 438
Score = 79.5 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 4/132 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ +++ ++ + F + S S+ + VL+ + L + + +
Sbjct: 292 EPEIAAGLVSVRDEADRSVIVLRGDGLFGSGSTSVIDRYMPVLTRVADALNRVQGNVRVS 351
Query: 87 GHADELGSRN----SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
G+ D+ S+ L RA AV + AR R+ G P
Sbjct: 352 GYTDDTPVHTARFASNWDLSRERAQAVRSLIAARLDRPERITAEGRGTLDPVAPNDSPAN 411
Query: 143 YAKNRRAIVFLK 154
A+NRR + L
Sbjct: 412 RARNRRVEITLM 423
>gi|330502789|ref|YP_004379658.1| flagellar motor protein MotD [Pseudomonas mendocina NK-01]
gi|328917075|gb|AEB57906.1| flagellar motor protein MotD [Pseudomonas mendocina NK-01]
Length = 269
Score = 79.5 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 20/128 (15%), Positives = 41/128 (32%), Gaps = 4/128 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
L + + S+ F + ++ + L + +EG D
Sbjct: 108 QSDQLTVRGNEMWIEIELSSSLLFPSGDAIPNNQAFDIIEKVAKILAPYQNPVKVEGFTD 167
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
L ++ L RA ++ G+ SR+ YG+ P + +N
Sbjct: 168 NLPIQTAQYPTNWELSTARASSIVRMLAMDGVDPSRLAAVGYGEFQPVADNATAEGRGRN 227
Query: 147 RRAIVFLK 154
RR ++ +
Sbjct: 228 RRVVLVIS 235
>gi|329902399|ref|ZP_08273103.1| Outer membrane lipoprotein omp16 precursor [Oxalobacteraceae
bacterium IMCC9480]
gi|327548814|gb|EGF33448.1| Outer membrane lipoprotein omp16 precursor [Oxalobacteraceae
bacterium IMCC9480]
Length = 224
Score = 79.5 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 55/135 (40%), Gaps = 1/135 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ + V + + ++ + FDT+ I+P VL G+ L +
Sbjct: 85 NQKQAMEQATRGTGVQVTQTADNRLKLAIPSDISFDTNRSDIKPDFRPVLDRFGNSLNDN 144
Query: 80 DCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
I GH D GS + L + RA +Y ++RG++ R + G+ P +
Sbjct: 145 ASTVVTIIGHTDNTGSAAINDPLSVDRAGRTRDYLISRGVAPYRFTIEGRGENDPIASNN 204
Query: 139 DEDAYAKNRRAIVFL 153
D A+NRR +F+
Sbjct: 205 DSTGRARNRRVEIFV 219
>gi|167899688|ref|ZP_02487089.1| hypothetical protein Bpse7_38555 [Burkholderia pseudomallei 7894]
Length = 407
Score = 79.5 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 4/132 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ +++ ++ + F + S S+ + VL+ + L + + +
Sbjct: 261 EPEIAAGLVSVRDEADRSVIVLRGDGLFGSGSTSVIDRYMPVLTRVADALNRVQGNVRVS 320
Query: 87 GHADELGSRN----SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
G+ D+ S+ L RA AV + AR R+ G P
Sbjct: 321 GYTDDTPVHTARFASNWDLSRERAQAVRSLIAARLDRPERITAEGRGTLDPVAPNDSPAN 380
Query: 143 YAKNRRAIVFLK 154
A+NRR + L
Sbjct: 381 RARNRRVEITLM 392
>gi|91225860|ref|ZP_01260829.1| outer membrane protein OmpA [Vibrio alginolyticus 12G01]
gi|269965437|ref|ZP_06179556.1| outer membrane protein OmpA [Vibrio alginolyticus 40B]
gi|91189510|gb|EAS75786.1| outer membrane protein OmpA [Vibrio alginolyticus 12G01]
gi|269829916|gb|EEZ84146.1| outer membrane protein OmpA [Vibrio alginolyticus 40B]
Length = 320
Score = 79.5 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Query: 54 FDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FD +S +++P L N + E + + G+ D G ++ + +RA +V N
Sbjct: 211 FDLNSTTLKPESAAKLDNLVAFLNEHPQANVEVVGYTDTSGPAAYNLKVSEKRAESVANA 270
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V +GI +SR++ G+ P + +NRR V +
Sbjct: 271 LVEKGIDSSRIQARGEGENNPIASNDTREGRQQNRRVEVVV 311
>gi|332878199|ref|ZP_08445928.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332683937|gb|EGJ56805.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 229
Score = 79.5 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/149 (22%), Positives = 68/149 (45%), Gaps = 3/149 (2%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDS--VFFDTSSYSIRPAD 65
++ A + + +D KI + + + ++ V+F+T+ ++I
Sbjct: 64 VVGGAAGAVIGNQMDKQAKKIEEEIPGAEVKRVDDGIVVTFDENSGVYFETAKHNINEKS 123
Query: 66 IQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+ L+ + E + + ++ G+ D +G ++ L RRA +V NYF + G++ASR
Sbjct: 124 KETLNKLIAVLKEYPETNVVVAGYTDSVGKDEYNMGLSKRRAQSVTNYFTSNGLAASRFT 183
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+G++ P + AKNRR V +
Sbjct: 184 TKWFGEQNPVADNGTPEGRAKNRRVNVVI 212
>gi|315078400|gb|EFT50431.1| OmpA family protein [Propionibacterium acnes HL053PA2]
Length = 368
Score = 79.5 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 49/136 (36%), Gaps = 2/136 (1%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW--LEK 78
++ L T E +E + SV FD S ++PA Q++ K
Sbjct: 231 VNALVTTTGDASDASRERVTKESMKIDLDASVLFDLDSDVVKPAGRQIIDRTAKQLVARK 290
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ G+ D GS + ++ L RRA +V ++ + G+ P
Sbjct: 291 VSGKIEVTGYTDSSGSASHNLDLSRRRAASVAKGLGSQLSKGITLVTAGKGEADPVTSND 350
Query: 139 DEDAYAKNRRAIVFLK 154
E NRR + +K
Sbjct: 351 SEAGRRLNRRVTITVK 366
>gi|149909537|ref|ZP_01898191.1| outer membrane protein [Moritella sp. PE36]
gi|149807442|gb|EDM67393.1| outer membrane protein [Moritella sp. PE36]
Length = 211
Score = 79.5 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 50/102 (49%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
V+FD + + VL + L+ ++ + ++EGHAD G+ + + +LGL+R+ +V
Sbjct: 110 RVYFDFDNAHLTDKSKYVLDTIMQLLKLNNNNLVVEGHADTTGTADYNFSLGLKRSRSVA 169
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
Y G+ R++ TS G MP E NRR +
Sbjct: 170 QYLKQLGVEKGRLEATSVGDTMPISDNDTEAGRQLNRRVEIK 211
>gi|193212309|ref|YP_001998262.1| peptidoglycan-associated lipoprotein [Chlorobaculum parvum NCIB
8327]
gi|193085786|gb|ACF11062.1| peptidoglycan-associated lipoprotein [Chlorobaculum parvum NCIB
8327]
Length = 169
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Query: 6 IFIILSAITMMSISGIDNLDTKIS--------SPDTVLNESSLQEQFSSSVGDSVFFDTS 57
IIL+ + S + + + S + +V +FFD
Sbjct: 12 AMIILAGCSSKSAVSTSGDASGAGYGAGADGATSGVTVENLSGDNAVAGAVIGDIFFDFD 71
Query: 58 SYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
S ++ + L +W+EK+ + I+GH DE G+ ++ALG RRA A Y +
Sbjct: 72 SSALSDEAQEQLKQNAAWMEKNPLVNATIQGHCDERGTDEYNLALGERRATAAKEYLITA 131
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
G+SA R+ S+G+EMP GH+E+A+AKNRR
Sbjct: 132 GVSAGRLTAVSFGEEMPFDPGHNEEAWAKNRR 163
>gi|189426515|ref|YP_001953692.1| peptidoglycan-associated lipoprotein [Geobacter lovleyi SZ]
gi|189422774|gb|ACD97172.1| peptidoglycan-associated lipoprotein [Geobacter lovleyi SZ]
Length = 188
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/134 (32%), Positives = 64/134 (47%), Gaps = 2/134 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW--LEKH 79
+ K +P ++ + + ++V+FD +R LS +
Sbjct: 53 KQEEPKQEAPKQEEATATAAKASEAVALETVYFDFDKSDLRQDARDALSKNAEALLKKVA 112
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
D IEGH DE GS ++ALG RRA +V Y G+ A R+ SYGKE P+V G D
Sbjct: 113 DAKIKIEGHCDERGSDEYNLALGDRRAKSVAKYLTTLGVKADRISTISYGKEKPAVQGSD 172
Query: 140 EDAYAKNRRAIVFL 153
E A++KNRRA +
Sbjct: 173 EAAWSKNRRAEFVI 186
>gi|114776523|ref|ZP_01451568.1| putative lipoprotein [Mariprofundus ferrooxydans PV-1]
gi|114553353|gb|EAU55751.1| putative lipoprotein [Mariprofundus ferrooxydans PV-1]
Length = 223
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 60/129 (46%), Gaps = 1/129 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFL 84
+K ++ ++ + + ++ F + S + Q L ++ + L+++
Sbjct: 89 SKDATAGNIVVQRETPQALKLTLSRDAAFASGSNELSEQGKQTLDDVATLLKRYKKTRLT 148
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
I GH D G+ + +L RRA AV +Y +++G+SA R+ + G+ P+ A
Sbjct: 149 ITGHTDSTGTALFNQSLSERRALAVASYMISKGVSADRIASSGMGESSPAYPNDSAANRA 208
Query: 145 KNRRAIVFL 153
KNRR + +
Sbjct: 209 KNRRVEILI 217
>gi|78485244|ref|YP_391169.1| OmpA/MotB [Thiomicrospira crunogena XCL-2]
gi|78363530|gb|ABB41495.1| Tol system Pal protein [Thiomicrospira crunogena XCL-2]
Length = 205
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/138 (26%), Positives = 67/138 (48%), Gaps = 2/138 (1%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
+G D ++S D + + ++FD Y + ++ + + +
Sbjct: 67 AGATGSDVSSESLASQDLNAMSQDVPA-LGQTFEPVIYFDYDQYIVDDTSLETVKHYATI 125
Query: 76 -LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
++ + GH DE G+ ++ALG +RA AV F+ G+ R++V S G+E+P
Sbjct: 126 LIDNPSEKIQLVGHTDERGTPEYNLALGEKRAKAVAEAFMLYGVHKDRIEVISLGEELPV 185
Query: 135 VYGHDEDAYAKNRRAIVF 152
+ GH+E+A+AKNRR +
Sbjct: 186 MEGHNEEAWAKNRRVEIK 203
>gi|157146633|ref|YP_001453952.1| peptidoglycan-associated outer membrane lipoprotein [Citrobacter
koseri ATCC BAA-895]
gi|157083838|gb|ABV13516.1| hypothetical protein CKO_02399 [Citrobacter koseri ATCC BAA-895]
Length = 172
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 55/171 (32%), Positives = 81/171 (47%), Gaps = 19/171 (11%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKIS--------------SPDTVLNESSLQE 42
MQ + + I L + + + S N S S + E + +
Sbjct: 1 MQLNKVLKGLMIALPVMAIAACSSNKNASNDGSEGMLGAGTGMDANGSGNMSSEEQARLQ 60
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIAL 101
+ V+FD Y IR +L ++L + +EGHADE G+ +I+L
Sbjct: 61 MQQLQQNNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADERGTPEYNISL 120
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
G RRA AV Y +G+SA ++ + SYGKE P+V GHDE AYAKNRRA++
Sbjct: 121 GERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYAKNRRAVLV 171
>gi|222823242|ref|YP_002574815.1| peptidoglycan-associated lipoprotein precursor [Campylobacter lari
RM2100]
gi|222538463|gb|ACM63564.1| peptidoglycan-associated lipoprotein precursor [Campylobacter lari
RM2100]
Length = 161
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 45/160 (28%), Positives = 73/160 (45%), Gaps = 6/160 (3%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG----DSVFFDT 56
M+ I + ++S N SS S ++F + +V+FD
Sbjct: 1 MKKIIFASITAFAVIVSGCATKNTSVSSSSSVDGSKGSGGSDRFENLESLNSVANVYFDF 60
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
+++R +V++N K + ++EG+ DE G+ + ALGL+RA AV V
Sbjct: 61 DKFNVRSDMQKVIANNAEIFNKEAANAAIVVEGNCDEWGTDEYNQALGLKRAKAVKESLV 120
Query: 115 ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
A+G+SA R+ V SYG+ P + A+NRRA L
Sbjct: 121 AQGVSADRISVKSYGETNPVCTERTKACDAQNRRAEFKLS 160
>gi|314955058|gb|EFS99464.1| OmpA family protein [Propionibacterium acnes HL027PA1]
Length = 368
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 49/136 (36%), Gaps = 2/136 (1%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW--LEK 78
++ L T E +E + SV FD S ++PA Q++ K
Sbjct: 231 VNALVTTTGDASDASRERVTKESMKIDLDASVLFDLDSDVVKPAGRQIIDRTAKQLVARK 290
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ G+ D GS + ++ L RRA +V ++ + G+ P
Sbjct: 291 VSGKIEVTGYTDSSGSASHNLDLSRRRAASVAKVLGSQLSKGITLVTAGKGEADPVTSND 350
Query: 139 DEDAYAKNRRAIVFLK 154
E NRR + +K
Sbjct: 351 SEAGRRLNRRVTITVK 366
>gi|330951040|gb|EGH51300.1| OmpA/MotB [Pseudomonas syringae Cit 7]
Length = 229
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 1/125 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHA 89
+T + +Q + ++ F T S +I + L+NL S + + + I G+
Sbjct: 98 ANTGVEVQRQGDQIKLIMPGNITFATDSSAIASSFYSPLNNLASSLKQFNQNNIEIVGYT 157
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GSR ++ L +RA +V Y ++G+ S + V G + P D + A+NRR
Sbjct: 158 DSTGSRQHNMDLSQQRAQSVATYLTSQGVDQSHLSVRGAGPDQPIASNADVNGRAQNRRV 217
Query: 150 IVFLK 154
V LK
Sbjct: 218 EVNLK 222
>gi|226944750|ref|YP_002799823.1| hypothetical protein Avin_26720 [Azotobacter vinelandii DJ]
gi|226719677|gb|ACO78848.1| OmpA/MotB domain protein [Azotobacter vinelandii DJ]
Length = 430
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 44/126 (34%), Gaps = 4/126 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
D ++ S ++ + FD+ + + +L+ +G L L+ G+ D
Sbjct: 295 DGLVRVSDEVDRSLVVLRGDGLFDSGAAQVIERFQPLLARIGDALNTTRGSVLVMGYTDN 354
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+ S+ L RA V AR R++ G P A+NR
Sbjct: 355 VPIRGLRYASNWELSQARADTVKAQLQARLSDPGRVRAEGRGAADPVAPNDSPANRARNR 414
Query: 148 RAIVFL 153
R + L
Sbjct: 415 RVEITL 420
>gi|222081943|ref|YP_002541308.1| OmpA/MotB domain protein [Agrobacterium radiobacter K84]
gi|221726622|gb|ACM29711.1| OmpA/MotB domain protein [Agrobacterium radiobacter K84]
Length = 494
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 54/147 (36%), Gaps = 7/147 (4%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVF------FDTSSYSIRPADIQV 68
+ + + + +++ S+ +++ FDT I PA V
Sbjct: 348 SFAAAIPEGFKATPAEIAVSAPAAAVDAPNCQSLLNTILTKSKINFDTGKARISPASSGV 407
Query: 69 LS-NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
L + + + GH D G +++AL +RA AV Y G+ ASR+
Sbjct: 408 LDTIVATIGRCPGNAVEVSGHTDSSGDEAANVALSEQRAKAVVTYLTDAGVPASRLTAVG 467
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G P ++ A NRR +K
Sbjct: 468 LGSSRPVASNDTDEGKALNRRIEFSVK 494
>gi|319778087|ref|YP_004134517.1| type IV / vi secretion system protein, dotu family [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|317171806|gb|ADV15343.1| type IV / VI secretion system protein, DotU family [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 498
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 5/117 (4%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS-----RN 96
+ + + + F + +P + +++ + LE I GH D +
Sbjct: 376 DFIVVEINNLLLFQSGRAETKPEFQPIAADIAAALEHEPGPIRIVGHTDNVKPRRSSAFK 435
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L L RA AV A+ SR+ V G++ P + A+NRR V +
Sbjct: 436 SNFDLSLARAKAVEALMAAKFSDPSRLTVDGKGEDEPIAENATPEGRARNRRVDVMI 492
>gi|238897411|ref|YP_002923088.1| pal protein [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
gi|229465166|gb|ACQ66940.1| pal protein [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
Length = 173
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 20/172 (11%)
Query: 1 MQY-----STIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD----- 50
M++ + + L ++M+ + N + +T + + S D
Sbjct: 1 MKFNHKILKRLTLALFIFSVMACTSHKNTNHSEMGAETTDISTDMNGNSGVSSADERARA 60
Query: 51 ---------SVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIA 100
V+FD Y+I+P ++L+ +L IEGH D+ G+ ++A
Sbjct: 61 QIEGLQKTSVVYFDFDKYNIKPNFAEILNAHADFLLNNPSFKVDIEGHTDQSGTSEYNMA 120
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
LG RRA AV Y +G+SA +M + SYGKE P G++++ Y++NRRA++
Sbjct: 121 LGERRANAVKMYLQGKGVSAQQMSIVSYGKEKPVYRGNNKEDYSQNRRAVLI 172
>gi|193076900|gb|ABO11623.2| OmpA/MotB [Acinetobacter baumannii ATCC 17978]
Length = 471
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 61/148 (41%), Gaps = 2/148 (1%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG-DSVFFDTSSYSIRPADI 66
++ +A S ++L ++ + + ++ + F + S I +
Sbjct: 322 VVAAAPETAEQSVSNSLSASQTALTAIDPNNVDVNALVKALNLQIINFASGSSDIPADNK 381
Query: 67 QVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
+L + + + GH D G+ ++ AL RRA AV +Y V++G+ AS++
Sbjct: 382 AILDQAATLLNKVSGVKLDVGGHTDSTGNAAANKALSQRRAQAVVDYLVSKGVDASKLVA 441
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+G E P E+ KNRR +
Sbjct: 442 KGHGSEQPVADNTTEEGRFKNRRIEFSV 469
>gi|157149164|ref|YP_001456483.1| putative outer membrane lipoprotein [Citrobacter koseri ATCC
BAA-895]
gi|157086369|gb|ABV16047.1| hypothetical protein CKO_05004 [Citrobacter koseri ATCC BAA-895]
Length = 220
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 67/135 (49%), Gaps = 1/135 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
+ + T ++ + + ++ ++V FD+SS +++PA L+ + L++++
Sbjct: 83 VQEAKLRDKMQGTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYN 142
Query: 81 CD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ G+ D G ++ ++ L +RA +V + + +G++A+R++ + G P
Sbjct: 143 KTAVNVVGYTDSTGGQDLNMRLSQQRADSVASALITQGVAANRIRTSGMGPANPIASNST 202
Query: 140 EDAYAKNRRAIVFLK 154
+ A+NRR + L
Sbjct: 203 AEGKAQNRRVEITLS 217
>gi|70729063|ref|YP_258799.1| flagellar motor protein MotD [Pseudomonas fluorescens Pf-5]
gi|68343362|gb|AAY90968.1| motB protein [Pseudomonas fluorescens Pf-5]
Length = 294
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 43/115 (37%), Gaps = 4/115 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ S+ F + ++ + L+ D +EG D L ++
Sbjct: 129 VEIELNSSLLFGSGDAMPSDQAFTIIDKVAKILKPFDNPIHVEGFTDNLPIQTAQYPTNW 188
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L R+ ++ +G++ +RM YG+ P + A+NRR ++ +
Sbjct: 189 ELSSARSASIVRMLAMQGVNPARMASVGYGEFQPVANNATAEGRARNRRVVLVVS 243
>gi|332667579|ref|YP_004450367.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332336393|gb|AEE53494.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 239
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 1/128 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+ E + + FD S+ ++ Q L + + D D LI GH D
Sbjct: 101 GNTATVERVGEGIKVTFNSQLLFDFGKSSLMESNKQTLESFAETLKQNPDTDLLIVGHTD 160
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
+GS + +L RA AV N+ G+S+SR+K+ G++ P V E A+NRR
Sbjct: 161 NVGSDAFNQSLSENRAAAVSNHLSTFGVSSSRLKIQGMGEKQPLVANTTESERAQNRRVE 220
Query: 151 VFLKGCRA 158
+ + A
Sbjct: 221 IAIIANEA 228
>gi|189475078|gb|ACE00213.1| OmpA [Vibrio alginolyticus]
Length = 320
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Query: 54 FDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FD +S +++P L N + E + + G+ D G ++ + +RA +V N
Sbjct: 211 FDLNSTTLKPESAAKLDNLVAFLNEHPQANVEVVGYTDTSGPAAYNLKVSEKRAESVANA 270
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V +GI +SR++ G+ P + +NRR V +
Sbjct: 271 LVEKGIDSSRIQARGEGENNPIASNDTREGRQQNRRVEVVV 311
>gi|167034899|ref|YP_001670130.1| flagellar motor protein MotD [Pseudomonas putida GB-1]
gi|166861387|gb|ABY99794.1| OmpA/MotB domain protein [Pseudomonas putida GB-1]
Length = 285
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 42/115 (36%), Gaps = 4/115 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ S+ F + ++ + + L+ +EG D L ++
Sbjct: 130 IEIELNSSLLFGSGDAMPSDKAFAIIDKVANILKPFANPVHVEGFTDNLPIRTAQYPTNW 189
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L RA ++ G++ +RM YG+ P D A+NRR ++ +
Sbjct: 190 ELSSARAASIVRLLAMEGVNPARMASVGYGEYQPVASNDTADGRARNRRVVLVIS 244
>gi|221068061|ref|ZP_03544166.1| peptidoglycan-associated lipoprotein [Comamonas testosteroni KF-1]
gi|220713084|gb|EED68452.1| peptidoglycan-associated lipoprotein [Comamonas testosteroni KF-1]
Length = 175
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 2/139 (1%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+G S + ++ + V V+FD SYS++ +
Sbjct: 35 LSSQGAGTSGQGQSGVSGVDLTGSAASKAG-PQGVSRIVYFDFDSYSVKADAQPQIEAHA 93
Query: 74 SWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
+++ + +EGH DE G R ++ALG +RA AV G++ ++++ SYGKE
Sbjct: 94 KFIKANPAAKVQLEGHTDERGGREYNLALGQKRAEAVRRSLGLLGVNDAQVEAVSYGKEK 153
Query: 133 PSVYGHDEDAYAKNRRAIV 151
P+ GH EDAYA+NRR +
Sbjct: 154 PAAEGHGEDAYAQNRRVEI 172
>gi|26246711|ref|NP_752751.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli CFT073]
gi|91209776|ref|YP_539762.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli UTI89]
gi|237707296|ref|ZP_04537777.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
sp. 3_2_53FAA]
gi|331645892|ref|ZP_08346995.1| peptidoglycan-associated lipoprotein [Escherichia coli M605]
gi|26107110|gb|AAN79294.1|AE016757_198 Peptidoglycan-associated lipoprotein precursor [Escherichia coli
CFT073]
gi|91071350|gb|ABE06231.1| peptidoglycan-associated lipoprotein precursor [Escherichia coli
UTI89]
gi|226898506|gb|EEH84765.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
sp. 3_2_53FAA]
gi|331044644|gb|EGI16771.1| peptidoglycan-associated lipoprotein [Escherichia coli M605]
Length = 181
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 55/172 (31%), Positives = 81/172 (47%), Gaps = 20/172 (11%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSP---------------DTVLNESSLQ 41
MQ + + I L + + + S N S + E +
Sbjct: 9 MQLNKVLKGLMIALPVMAIAACSSNKNASNDGSEGMLGAGTGMDANGGNGNMSSEEQARL 68
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIA 100
+ + V+FD Y IR Q+L ++L + +EGHADE G+ +I+
Sbjct: 69 QMQQLQQNNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADERGTPEYNIS 128
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
LG RRA AV Y +G+SA ++ + SYGKE P+V GHDE AYAKNRRA++
Sbjct: 129 LGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYAKNRRAVLV 180
>gi|110637988|ref|YP_678195.1| OmpA family outer membrane protein [Cytophaga hutchinsonii ATCC
33406]
gi|110280669|gb|ABG58855.1| outer membrane protein, OmpA family [Cytophaga hutchinsonii ATCC
33406]
Length = 517
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYA 108
+++FFD S ++R L L L+ + I+GH D +G ++ L RA A
Sbjct: 410 NNIFFDVSKSTLRQESYAELDRLYLILQNNPVMEIEIDGHTDNVGDPIINMQLSNDRANA 469
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V +Y + +GI+ R+ +G P V E+ NRR +
Sbjct: 470 VKDYLLKKGIAPGRIVTKGFGGTKPIVSNDTEELKKLNRRVEFTI 514
>gi|332828413|gb|EGK01122.1| hypothetical protein HMPREF9455_02644 [Dysgonomonas gadei ATCC
BAA-286]
Length = 224
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 52/123 (42%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+ + + + + F T+S ++ A L++ + D D I GH D
Sbjct: 88 GAQVESINDGQAIKVTFESGILFATNSSTLNSASQSALTSFATSLNNNPDTDVQIYGHTD 147
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + L +RA +V+N+ +G+S SRM +G P ++NRR
Sbjct: 148 NTGSDAINNPLSEKRAQSVYNFLQTKGVSGSRMVSQGFGSTQPVADNSTVAGRSQNRRVE 207
Query: 151 VFL 153
+++
Sbjct: 208 IYI 210
>gi|237744058|ref|ZP_04574539.1| outer membrane porin F [Fusobacterium sp. 7_1]
gi|256028141|ref|ZP_05441975.1| Outer membrane porin F [Fusobacterium sp. D11]
gi|260494357|ref|ZP_05814488.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_33]
gi|289766078|ref|ZP_06525456.1| outer membrane porin F [Fusobacterium sp. D11]
gi|229431287|gb|EEO41499.1| outer membrane porin F [Fusobacterium sp. 7_1]
gi|260198503|gb|EEW96019.1| type VI secretion system OmpA/MotB [Fusobacterium sp. 3_1_33]
gi|289717633|gb|EFD81645.1| outer membrane porin F [Fusobacterium sp. D11]
Length = 182
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALG 102
S+ + + FD Y ++ LS L E D I+G+ D +G+ ++ L
Sbjct: 69 LILSMPELILFDFDKYIVKDKIKPSLSTLAKALGENKDIHIKIDGYTDFIGTEAYNLELS 128
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
++RA A+ ++ ++RG S + + YG++ P+ ++NRR +
Sbjct: 129 VKRANAIKDFLISRGAIGSNISIEGYGEQNPADTNQTAAGRSRNRRVEFIIS 180
>gi|126730426|ref|ZP_01746237.1| OmpA domain protein [Sagittula stellata E-37]
gi|126709159|gb|EBA08214.1| OmpA domain protein [Sagittula stellata E-37]
Length = 718
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 40/105 (38%), Gaps = 1/105 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYA 108
+ F+ S ++ + +L L L+ D I GH D G + + L RA +
Sbjct: 495 RKINFEPGSATLDISARDILDELADLLKTCGDIPLEIGGHTDSQGRESMNQQLSRDRAQS 554
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V + R + +V YG+ P E+ NRR L
Sbjct: 555 VLDALRGRRVPVRMYEVKGYGEAQPIADNDTEEGREANRRIEFKL 599
>gi|50841753|ref|YP_054980.1| putative outer membrane protein A [Propionibacterium acnes
KPA171202]
gi|289424480|ref|ZP_06426263.1| OmpA family protein [Propionibacterium acnes SK187]
gi|289428850|ref|ZP_06430530.1| OmpA family protein [Propionibacterium acnes J165]
gi|295129833|ref|YP_003580496.1| OmpA family protein [Propionibacterium acnes SK137]
gi|50839355|gb|AAT82022.1| putative outer membrane protein A [Propionibacterium acnes
KPA171202]
gi|289155177|gb|EFD03859.1| OmpA family protein [Propionibacterium acnes SK187]
gi|289157851|gb|EFD06074.1| OmpA family protein [Propionibacterium acnes J165]
gi|291376750|gb|ADE00605.1| OmpA family protein [Propionibacterium acnes SK137]
gi|313765278|gb|EFS36642.1| OmpA family protein [Propionibacterium acnes HL013PA1]
gi|313772807|gb|EFS38773.1| OmpA family protein [Propionibacterium acnes HL074PA1]
gi|313793172|gb|EFS41239.1| OmpA family protein [Propionibacterium acnes HL110PA1]
gi|313806398|gb|EFS44905.1| OmpA family protein [Propionibacterium acnes HL087PA2]
gi|313810947|gb|EFS48661.1| OmpA family protein [Propionibacterium acnes HL083PA1]
gi|313814554|gb|EFS52268.1| OmpA family protein [Propionibacterium acnes HL025PA1]
gi|313815353|gb|EFS53067.1| OmpA family protein [Propionibacterium acnes HL059PA1]
gi|313817476|gb|EFS55190.1| OmpA family protein [Propionibacterium acnes HL046PA2]
gi|313821987|gb|EFS59701.1| OmpA family protein [Propionibacterium acnes HL036PA1]
gi|313824117|gb|EFS61831.1| OmpA family protein [Propionibacterium acnes HL036PA2]
gi|313826484|gb|EFS64198.1| OmpA family protein [Propionibacterium acnes HL063PA1]
gi|313831713|gb|EFS69427.1| OmpA family protein [Propionibacterium acnes HL007PA1]
gi|313834406|gb|EFS72120.1| OmpA family protein [Propionibacterium acnes HL056PA1]
gi|313840403|gb|EFS78117.1| OmpA family protein [Propionibacterium acnes HL086PA1]
gi|314917220|gb|EFS81051.1| OmpA family protein [Propionibacterium acnes HL050PA1]
gi|314921721|gb|EFS85552.1| OmpA family protein [Propionibacterium acnes HL050PA3]
gi|314926563|gb|EFS90394.1| OmpA family protein [Propionibacterium acnes HL036PA3]
gi|314931072|gb|EFS94903.1| OmpA family protein [Propionibacterium acnes HL067PA1]
gi|314959098|gb|EFT03200.1| OmpA family protein [Propionibacterium acnes HL002PA1]
gi|314961372|gb|EFT05473.1| OmpA family protein [Propionibacterium acnes HL002PA2]
gi|314964584|gb|EFT08684.1| OmpA family protein [Propionibacterium acnes HL082PA1]
gi|314969683|gb|EFT13781.1| OmpA family protein [Propionibacterium acnes HL037PA1]
gi|314974747|gb|EFT18842.1| OmpA family protein [Propionibacterium acnes HL053PA1]
gi|314977055|gb|EFT21150.1| OmpA family protein [Propionibacterium acnes HL045PA1]
gi|314980286|gb|EFT24380.1| OmpA family protein [Propionibacterium acnes HL072PA2]
gi|314985460|gb|EFT29552.1| OmpA family protein [Propionibacterium acnes HL005PA1]
gi|314987369|gb|EFT31460.1| OmpA family protein [Propionibacterium acnes HL005PA2]
gi|314989090|gb|EFT33181.1| OmpA family protein [Propionibacterium acnes HL005PA3]
gi|315082724|gb|EFT54700.1| OmpA family protein [Propionibacterium acnes HL027PA2]
gi|315086083|gb|EFT58059.1| OmpA family protein [Propionibacterium acnes HL002PA3]
gi|315087668|gb|EFT59644.1| OmpA family protein [Propionibacterium acnes HL072PA1]
gi|315097294|gb|EFT69270.1| OmpA family protein [Propionibacterium acnes HL038PA1]
gi|315099483|gb|EFT71459.1| OmpA family protein [Propionibacterium acnes HL059PA2]
gi|315102012|gb|EFT73988.1| OmpA family protein [Propionibacterium acnes HL046PA1]
gi|315106289|gb|EFT78265.1| OmpA family protein [Propionibacterium acnes HL030PA1]
gi|327331336|gb|EGE73075.1| putative outer membrane protein A [Propionibacterium acnes
HL096PA2]
gi|327333322|gb|EGE75042.1| putative outer membrane protein A [Propionibacterium acnes
HL096PA3]
gi|327445201|gb|EGE91855.1| OmpA family protein [Propionibacterium acnes HL013PA2]
gi|327447284|gb|EGE93938.1| OmpA family protein [Propionibacterium acnes HL043PA1]
gi|327450270|gb|EGE96924.1| OmpA family protein [Propionibacterium acnes HL043PA2]
gi|327454535|gb|EGF01190.1| OmpA family protein [Propionibacterium acnes HL087PA3]
gi|327456606|gb|EGF03261.1| OmpA family protein [Propionibacterium acnes HL083PA2]
gi|327457118|gb|EGF03773.1| OmpA family protein [Propionibacterium acnes HL092PA1]
gi|328755590|gb|EGF69206.1| OmpA family protein [Propionibacterium acnes HL087PA1]
gi|328756916|gb|EGF70532.1| OmpA family protein [Propionibacterium acnes HL025PA2]
gi|328758401|gb|EGF72017.1| OmpA family protein [Propionibacterium acnes HL020PA1]
gi|328761148|gb|EGF74692.1| putative outer membrane protein A [Propionibacterium acnes
HL099PA1]
gi|332674672|gb|AEE71488.1| putative outer membrane protein A [Propionibacterium acnes 266]
Length = 368
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 49/136 (36%), Gaps = 2/136 (1%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW--LEK 78
++ L T E +E + SV FD S ++PA Q++ K
Sbjct: 231 VNALVTTTGDASDASRERVTKESMKIDLDASVLFDLDSDVVKPAGRQIIDRTAKQLVARK 290
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ G+ D GS + ++ L RRA +V ++ + G+ P
Sbjct: 291 VSGKIEVTGYTDSSGSASHNLDLSRRRAASVAKVLGSQLSKGITLVTAGKGEADPVTSND 350
Query: 139 DEDAYAKNRRAIVFLK 154
E NRR + +K
Sbjct: 351 SEAGRRLNRRVTITVK 366
>gi|317407354|gb|EFV87320.1| OmpA-family protein [Achromobacter xylosoxidans C54]
Length = 332
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 57/147 (38%), Gaps = 4/147 (2%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVL 69
+ A + ++ ++ ++ S + + + F + ++ P+ + V+
Sbjct: 147 VVAQAAPPLKAPSKESLGLADLGNSVDVIINEQSVSFRISNELLFPSGQATLSPSGLDVI 206
Query: 70 SNLGSWLEKHDCDFLIEGHADELGSRNSS----IALGLRRAYAVFNYFVARGISASRMKV 125
L + L K+D +EGH+D + + L RA +V V G++ SR++
Sbjct: 207 KRLAAILNKNDYQVSVEGHSDPVPIQTRQFASNWELSSSRATSVLRELVRDGVAGSRLRA 266
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVF 152
Y + P A NRR +
Sbjct: 267 VGYAETRPIESNDTPAGRAANRRVELI 293
>gi|307332443|ref|ZP_07611507.1| OmpA/MotB domain protein [Streptomyces violaceusniger Tu 4113]
gi|306881912|gb|EFN13034.1| OmpA/MotB domain protein [Streptomyces violaceusniger Tu 4113]
Length = 211
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 46/128 (35%), Gaps = 1/128 (0%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-F 83
+ + + D + ++ V F S + + + S E+ +
Sbjct: 78 KSVVETDDGDERREDTNAKVKFALQAEVLFGKDSAKLGGEAKARIKEIASEAERQNAKSV 137
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
+ G D+LGS I L +RA AV + ++ YG++ P E+
Sbjct: 138 RVFGFTDDLGSAGHGIVLSKQRANAVQQALAEDLEPSVNYEIRGYGEQYPIADNASEEGR 197
Query: 144 AKNRRAIV 151
+NRR V
Sbjct: 198 KRNRRVEV 205
>gi|51594942|ref|YP_069133.1| OmpA/OmpF family outer membrane porin [Yersinia pseudotuberculosis
IP 32953]
gi|51588224|emb|CAH19831.1| putative OmpA/OmpF family outer membrane porin [Yersinia
pseudotuberculosis IP 32953]
Length = 168
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 58/165 (35%), Gaps = 9/165 (5%)
Query: 1 MQYST----IFIILSAITMMSISGIDNLDTKISSPDTVLNESS----LQEQFSSSVGDSV 52
MQ I++ A+ M + G ++ + + + + V
Sbjct: 4 MQNKRLIQRIWVSFLAMGFMLLVGCQAKPQGLTPDQITALQEQGFKLTDNGWEFGLANKV 63
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFN 111
FD+ + +Q + +G L ++GH D +G + + L +RA AV +
Sbjct: 64 LFDSDVKKLNSEGMQTVQKIGRILSDVGIKHMRVDGHTDSVGKDDYNQQLSYQRALAVAD 123
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
GI S + V GK P A+NRR + +
Sbjct: 124 TLATVGIPKSNIDVRGRGKLEPVADNRTSKGRAENRRVAIIITAS 168
>gi|325271956|ref|ZP_08138407.1| flagellar motor protein MotD [Pseudomonas sp. TJI-51]
gi|324102904|gb|EGC00300.1| flagellar motor protein MotD [Pseudomonas sp. TJI-51]
Length = 285
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 41/115 (35%), Gaps = 4/115 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ S+ F + ++ + L+ +EG D L ++
Sbjct: 130 IEIELNSSLLFGSGDAMPSDKAFAIIEKVADILKPFANPVHVEGFTDNLPIRTAQYPTNW 189
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L RA ++ G++ +RM YG+ P D A+NRR ++ +
Sbjct: 190 ELSSARAASIVRLLAMEGVNPARMASVGYGEYQPVASNDTADGRARNRRVVLVIS 244
>gi|298524392|ref|ZP_07011801.1| outer membrane protein [Mycobacterium tuberculosis 94_M4241A]
gi|298494186|gb|EFI29480.1| outer membrane protein [Mycobacterium tuberculosis 94_M4241A]
Length = 181
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 1/140 (0%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
M ++ I+ P + LQ ++ G + F S+ PAD ++L+ +
Sbjct: 41 MKIVNNIEVTGQAPPGPPASGPCADLQSAINAVTGGPIAFGNDGASLIPADYEILNRVAD 100
Query: 75 WLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
L+ I G+ D GS +I L +RA V +Y VARG++ + G P
Sbjct: 101 KLKACPDARVTINGYTDNTGSEGINIPLSAQRAKIVADYLVARGVAGDHIATVGLGSVNP 160
Query: 134 SVYGHDEDAYAKNRRAIVFL 153
+ AKNRR + +
Sbjct: 161 IASNATPEGRAKNRRVEIVV 180
>gi|289549271|ref|YP_003474259.1| OmpA/MotB domain protein [Thermocrinis albus DSM 14484]
gi|289182888|gb|ADC90132.1| OmpA/MotB domain protein [Thermocrinis albus DSM 14484]
Length = 335
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 55/133 (41%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
+ + + + E+ V V F+ +SY+I+ I +L + E
Sbjct: 196 EVVKEEEPQESPISTGEKTVEREYLMVPARVHFEFNSYTIKKEYIPLLLEVARILKENPQ 255
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
IEG+ D +GS+ + L +RA AV ++ +G+ ++++ +GKE
Sbjct: 256 IRVRIEGYTDNIGSKEYNEKLAFKRAKAVADFLKKQGVPQDKIEIAGFGKEGYIAPNTTP 315
Query: 141 DAYAKNRRAIVFL 153
NRRA +
Sbjct: 316 IGRFTNRRADFIV 328
>gi|94501021|ref|ZP_01307545.1| peptidoglycan-associated lipoprotein, putative [Oceanobacter sp.
RED65]
gi|94426768|gb|EAT11752.1| peptidoglycan-associated lipoprotein, putative [Oceanobacter sp.
RED65]
Length = 180
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/161 (23%), Positives = 69/161 (42%), Gaps = 15/161 (9%)
Query: 6 IFIILSAITMMSI--------------SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDS 51
+ ++++ S + + ++ +
Sbjct: 15 LSLVMAGCASSGGTTDEAATTETEQQQSETQAVPESPNVDVNTDAQAEAAQNNPLLDQTV 74
Query: 52 VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
V+F +RP VL+ + + +EGH DE G+ ++ALG RRA V
Sbjct: 75 VYFGFDRSELRPEFKDVLNAHAEYLVANPQASLTVEGHCDERGTVEYNLALGERRAETVK 134
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
Y + +G++ S+++ SYG+E P+V G DE A++KNRRA +
Sbjct: 135 RYLIVQGVAPSQLETVSYGEERPAVMGSDESAWSKNRRAEL 175
>gi|154247748|ref|YP_001418706.1| OmpA/MotB domain-containing protein [Xanthobacter autotrophicus
Py2]
gi|154161833|gb|ABS69049.1| OmpA/MotB domain protein [Xanthobacter autotrophicus Py2]
Length = 729
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 49/135 (36%), Gaps = 1/135 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
++ +P + ++ ++ F + S I ++ L L++
Sbjct: 591 VETAIDAAVAPPPADTPTCGRQVGELLARGTIRFASGSAEIDRHSRGLIDRLAVALKRCP 650
Query: 81 -CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
I GH D +G + L RA AV Y V G++A R+ +G P
Sbjct: 651 TAMVRILGHTDGVGDAEFNKRLSEARANAVLAYLVTAGVTADRLSAAGFGAGQPLAPNDT 710
Query: 140 EDAYAKNRRAIVFLK 154
E A NRR +K
Sbjct: 711 EAGKALNRRIEFEVK 725
>gi|290508935|ref|ZP_06548306.1| OmpA domain-containing protein [Klebsiella sp. 1_1_55]
gi|289778329|gb|EFD86326.1| OmpA domain-containing protein [Klebsiella sp. 1_1_55]
Length = 565
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 52/125 (41%), Gaps = 2/125 (1%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELG 93
+ + +Q + + FDT +++P ++L N L K ++ GH D +G
Sbjct: 417 VIKQVVQGPQTIRLDSMALFDTGKSTLKPGSTKLLVNSLLGIKAKPGWLIVVAGHTDSIG 476
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ S+ L L+RA AV ++ G V YG P D A+NRR +
Sbjct: 477 NDKSNQQLSLKRAEAVRDWMRDTGDVPESCFAVQGYGASRPVASNETPDGRAQNRRVEIS 536
Query: 153 LKGCR 157
L +
Sbjct: 537 LVPQK 541
>gi|257465020|ref|ZP_05629391.1| outer membrane protein precursor PalA [Actinobacillus minor 202]
gi|257450680|gb|EEV24723.1| outer membrane protein precursor PalA [Actinobacillus minor 202]
Length = 160
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/160 (28%), Positives = 78/160 (48%), Gaps = 11/160 (6%)
Query: 1 MQYSTIFIILSA-ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG--------DS 51
M+ ++++A +++ + ++ +N + + Q + ++
Sbjct: 1 MKKLAKVLMVAAPAFVLAACSSSTDNAAANANGAGVNGADVNGQSFGGISAQDLQTRYNT 60
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
V+F SY++ Q+L L + + GHADE G+ +IALG RRA AV N
Sbjct: 61 VYFAFDSYAVEGEYRQLLDAHAQLLNATKANVTVAGHADERGTPEYNIALGQRRANAVQN 120
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
Y +G A+ + SYG+E P+V GH E YAKNRRA++
Sbjct: 121 YLAQQG--ATNVSTVSYGEEKPAVLGHTEADYAKNRRAVL 158
>gi|89100891|ref|ZP_01173740.1| flagellar motor protein [Bacillus sp. NRRL B-14911]
gi|89084378|gb|EAR63530.1| flagellar motor protein [Bacillus sp. NRRL B-14911]
Length = 269
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 50/133 (37%), Gaps = 6/133 (4%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLI 85
+ + L S E ++ D+VFF + S +R ++ + +G + + +I
Sbjct: 133 QNNGLTDKLETSLTDEGLLVTIRDNVFFASGSAEVRSGELTIADEIGELLVMDPPRNIII 192
Query: 86 EGHADELGSRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
GH D + +NS R + + + A +G+ P+ +
Sbjct: 193 SGHTDNMPIKNSEFESNWELSVMRAVNFMKILLHNKDLDARAFSAKGFGEFQPAASNDTK 252
Query: 141 DAYAKNRRAIVFL 153
+ KNRR + +
Sbjct: 253 EGRDKNRRVEILI 265
>gi|254517026|ref|ZP_05129084.1| OmpA/MotB domain protein [gamma proteobacterium NOR5-3]
gi|219674531|gb|EED30899.1| OmpA/MotB domain protein [gamma proteobacterium NOR5-3]
Length = 270
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 49/128 (38%), Gaps = 4/128 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
+ + + + F + S S+ + I +L L L+ + +++GH D
Sbjct: 132 APDRFAVTGNDKWLEIKIPARMLFPSGSRSLLASSIPMLRRLADTLKALPNEVVVQGHTD 191
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S+ L RA A+ F G+ ++ +G P E+ A+N
Sbjct: 192 NQPIRNGQFPSNWELSTARAAAIARVFEEEGVDPVKLSAVGFGPNRPIADNASEEGRAEN 251
Query: 147 RRAIVFLK 154
RR +V ++
Sbjct: 252 RRVVVLVR 259
>gi|218290401|ref|ZP_03494531.1| OmpA/MotB domain protein [Alicyclobacillus acidocaldarius LAA1]
gi|218239529|gb|EED06723.1| OmpA/MotB domain protein [Alicyclobacillus acidocaldarius LAA1]
Length = 271
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 45/126 (35%), Gaps = 4/126 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD- 90
+ ++ D F+T + P ++ L + ++ D ++EG+ D
Sbjct: 130 SGEVQVIDEARGVQITMRDVALFNTGQAVLLPKAKAIIEGLIPFFKQISNDIVVEGYTDT 189
Query: 91 ---ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
S+ L RA +V + GI+ +R+ YG+ P NR
Sbjct: 190 QPINTPIYPSNWELSAARAMSVVRFLADHGINPTRLAGMGYGQYHPVASNATPAGRQANR 249
Query: 148 RAIVFL 153
R + +
Sbjct: 250 RVNIVI 255
>gi|113867012|ref|YP_725501.1| outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Ralstonia eutropha H16]
gi|113525788|emb|CAJ92133.1| outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Ralstonia eutropha H16]
Length = 308
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 41/101 (40%), Gaps = 1/101 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
V F+T S + A +L + D +EGH D G + L RRA AV
Sbjct: 205 VNFETDSDVLSAAARPLLDRAAKAVLAHPDWRLRVEGHTDSTGGDARNQPLSERRAAAVR 264
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
Y + G+ A R+ YG P + A+NRR +
Sbjct: 265 RYLESAGVPADRLDAKGYGATHPLMSNDTPFGRAQNRRVEL 305
>gi|50085693|ref|YP_047203.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter sp.
ADP1]
gi|49531669|emb|CAG69381.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter sp.
ADP1]
Length = 193
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/179 (22%), Positives = 70/179 (39%), Gaps = 28/179 (15%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESS--------------------- 39
M +F++ T + ++G + ++
Sbjct: 5 MNAMKLFVLPVLATALVMTGCASRKPAAPVSAANTPSTATTVSTEGLSEDAALNAKNLTG 64
Query: 40 ------LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADEL 92
+ V FD S + D Q L + + + + GH DE
Sbjct: 65 ASAKGVTAANRAFLAKRVVHFDYDSSDLSTEDYQTLQAHAQFLIANANSRVALTGHTDER 124
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
G+R ++ALG RRA AV +Y + G++ +++ SYGKEMP GH+E A+ +NRR +
Sbjct: 125 GTREYNMALGERRAKAVQSYLITNGVNPQQLEAVSYGKEMPINPGHNEAAWKENRRVEI 183
>gi|258510423|ref|YP_003183857.1| OmpA/MotB domain-containing protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446]
gi|257477149|gb|ACV57468.1| OmpA/MotB domain protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 271
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 45/126 (35%), Gaps = 4/126 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD- 90
+ ++ D F+T + P ++ L + ++ D ++EG+ D
Sbjct: 130 SGEVQVIDEARGVQITMRDVALFNTGQAVLLPKAKAIIEGLIPFFKQISNDIVVEGYTDT 189
Query: 91 ---ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
S+ L RA +V + GI+ +R+ YG+ P NR
Sbjct: 190 QPINTPIYPSNWELSAARAMSVVRFLADHGINPTRLAGMGYGQYHPVASNATPAGRQANR 249
Query: 148 RAIVFL 153
R + +
Sbjct: 250 RVNIVI 255
>gi|262041199|ref|ZP_06014411.1| peptidoglycan-associated lipoprotein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259041428|gb|EEW42487.1| peptidoglycan-associated lipoprotein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 174
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 55/173 (31%), Positives = 81/173 (46%), Gaps = 21/173 (12%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNL----------------DTKISSPDTVLNESSL 40
MQ + + I L + + + S N D + + E +
Sbjct: 1 MQLNKVLKGLMIALPVMAIAACSSNKNASNDQSGEVMLGAGTGMDANGNGGNMSSEEQAR 60
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSI 99
+ + V+FD Y IR +L ++L + +EGHADE G+ +I
Sbjct: 61 LQMQQLQQNNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADERGTPEYNI 120
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
ALG RRA AV Y +G+SA ++ + SYGKE P+V GHDE AYAKNRRA++
Sbjct: 121 ALGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYAKNRRAVLV 173
>gi|113460409|ref|YP_718471.1| peptidoglycan-associated outer membrane lipoprotein (outer membrane
protein P6) [Haemophilus somnus 129PT]
gi|112822452|gb|ABI24541.1| peptidoglycan-associated outer membrane lipoprotein (outer membrane
protein P6) [Haemophilus somnus 129PT]
Length = 135
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 48/138 (34%), Positives = 79/138 (57%), Gaps = 6/138 (4%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS-NLG 73
M + S DN + + + LQ+++ ++V+F+ SY ++ Q+L +
Sbjct: 1 MAACSSSDNASKTNAQMFGGYSVTDLQQRY-----NTVYFEFDSYDVQGEYAQILDAHSA 55
Query: 74 SWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
L+EGHADE G+ ++ALGLRRA AV N+ + +G+ AS++ SYG+E P
Sbjct: 56 YLKSTPASKVLVEGHADERGTPEYNMALGLRRADAVKNFLLNKGVQASQLSTLSYGEEKP 115
Query: 134 SVYGHDEDAYAKNRRAIV 151
+ GH+E AY+KNRRA++
Sbjct: 116 AELGHNEAAYSKNRRAVL 133
>gi|120612058|ref|YP_971736.1| OmpA domain-containing protein [Acidovorax citrulli AAC00-1]
gi|120590522|gb|ABM33962.1| OmpA domain protein [Acidovorax citrulli AAC00-1]
Length = 181
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 24/173 (13%)
Query: 3 YSTIFIILSAITMMSISG---------IDNLDTKISSPDTVLNESSLQEQFS-------- 45
+ I + L+ +M+ ++N ++PD + + Q +
Sbjct: 6 FKRISLALTVAALMAGCSSGVKLEDVPVENKGATSTAPDGANSSGNSQSGVAPVDLNQSA 65
Query: 46 ------SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSS 98
V V+FD SY ++P ++ +++ +IEGH D+ G R +
Sbjct: 66 RDAAGPVGVARIVYFDFDSYVVKPEYQSLIEQHARFIKASQGRKVMIEGHTDDRGGREYN 125
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ALG +RA AV G+ ++M+ S+GKE P+V G+ EDA+++NRR +
Sbjct: 126 LALGQKRAEAVRRALGLLGVPEAQMEAVSFGKEKPAVQGNTEDAFSQNRRVEL 178
>gi|49079216|gb|AAT49867.1| PA1041 [synthetic construct]
Length = 211
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 3/110 (2%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNSSIALGLRR 105
V + F S + AD + L+ + L+ I GH D +GS + L RR
Sbjct: 99 VVRDLHFAFDSSKVDAADSEKLNGIAERLKGEAASTRLSITGHTDSVGSDAYNQKLSERR 158
Query: 106 AYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
A AV NY + G+ +S + V G+ P + A+NRR + +K
Sbjct: 159 ANAVANYLIDAGVPSSIIVGVQGLGESQPVADNKTREGRAENRRVEILIK 208
>gi|330502392|ref|YP_004379261.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
gi|328916678|gb|AEB57509.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
Length = 210
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 2/112 (1%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGL 103
+ V V FD ++ + L +++++ ++EGH D +GS + L
Sbjct: 96 AVRVELDVKFDFDKAQVKQESYGDIKALADFMKQYPQTSTVVEGHTDSVGSDAYNQGLSE 155
Query: 104 RRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RRA AV + V + + + R++ YG+ P D A NRR ++
Sbjct: 156 RRASAVRDVLVNQYGVESGRVQAVGYGESRPVADNATADGRAINRRVEAEVE 207
>gi|255262798|ref|ZP_05342140.1| OmpA domain protein [Thalassiobium sp. R2A62]
gi|255105133|gb|EET47807.1| OmpA domain protein [Thalassiobium sp. R2A62]
Length = 176
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 17/171 (9%)
Query: 1 MQ-YSTIFIILSAITMMSISGIDNLDTKISSPD---------------TVLNESSLQEQF 44
M+ + +++ + + + + D D + N + + F
Sbjct: 1 MKQMTKAAFLIATLGISACTNADRFDNVTPTDANSGFGQPSGVDSLALDPANNPTSLQYF 60
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIALGL 103
S ++GD V F + S+ A L +WL + ++EGHADE G+R ++ALG
Sbjct: 61 SQTIGDRVLFTVDTSSLTAAGRSTLDGQATWLLTNSDYLAVVEGHADEQGTREYNLALGA 120
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RRA AV Y ++RG+ ++R++ SYGKE P+ +E YAKNRRA+ +
Sbjct: 121 RRANAVREYLISRGVPSNRLRTVSYGKERPTEICSEEACYAKNRRAVTIIS 171
>gi|330961787|gb|EGH62047.1| ompA family protein [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 229
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIE 86
S +T + +Q + ++ F T S +I + L+NL + + + + I
Sbjct: 95 ASMANTGVEVQRQGDQIKLIMPGNITFATDSSAIASSFYSPLNNLANSLKQFNQNNIEIV 154
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
G+ D GSR ++ L +RA +V Y ++G+ S + V G + P D + A+N
Sbjct: 155 GYTDSTGSRQHNMDLSQQRAQSVATYLTSQGVDQSHLSVRGAGPDQPIASNADVNGRAQN 214
Query: 147 RRAIVFLK 154
RR V LK
Sbjct: 215 RRVEVNLK 222
>gi|304312291|ref|YP_003811889.1| hypothetical protein HDN1F_26630 [gamma proteobacterium HdN1]
gi|301798024|emb|CBL46246.1| Hypothetical protein HDN1F_26630 [gamma proteobacterium HdN1]
Length = 224
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 62/153 (40%), Gaps = 2/153 (1%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSV-GDSVFFDTSSYSIRPADI 66
I L AI +S++G + + + + S ++ GDS+ F++S ++ +
Sbjct: 60 IFLGAILAVSLTGCMSAPPPPAPEPEPVAAPAQPAPESVTITGDSILFESSQSNVSRKGM 119
Query: 67 QVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
+ + IEGH D +G N + L RA +V N G+ +SRM
Sbjct: 120 PFIRKVADVLNAYPRSSISIEGHTDNMGEANYNQKLSEARANSVMNALNKAGVESSRMSA 179
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
T +G P V NRR + + G A
Sbjct: 180 TGFGMSKPLVENTSSSNRRTNRRVEIVVTGVDA 212
>gi|300866278|ref|ZP_07110987.1| putative Outer membrane protein F [Oscillatoria sp. PCC 6506]
gi|300335726|emb|CBN56147.1| putative Outer membrane protein F [Oscillatoria sp. PCC 6506]
Length = 314
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 43/135 (31%), Gaps = 1/135 (0%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCD 82
+ + ++ V F+ S ++RP +L N +
Sbjct: 180 KANNADESSGDRSSVFSADALMVTLPSDVLFEVGSSALRPGTNVILDNLIADLQNYEGAT 239
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
I GH D+ G + L RA AV Y YG+ PSV E
Sbjct: 240 VRIAGHTDDAGEVKDNQNLSFARAQAVEQYLSKTLGEKYHWVAIGYGESRPSVENTTEAN 299
Query: 143 YAKNRRAIVFLKGCR 157
+NRR V + R
Sbjct: 300 RQRNRRIEVAIAPLR 314
>gi|297538888|ref|YP_003674657.1| OmpA/MotB domain-containing protein [Methylotenera sp. 301]
gi|297258235|gb|ADI30080.1| OmpA/MotB domain protein [Methylotenera sp. 301]
Length = 272
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 4/119 (3%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR--- 95
+ DS+ F S + A VLS + ++ +D +EGH D +
Sbjct: 133 QNNRGIRIDINDSLLFTPGSAELAAAASTVLSEIAPMIKDNDRLIQVEGHTDNIAIHNDL 192
Query: 96 -NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA +V G++ SR+ +G P + E AKNRR + +
Sbjct: 193 FYSNWELSAVRASSVVRMLSDTGVAESRLSALGFGSTQPITENNTELGRAKNRRVSIMI 251
>gi|269963902|ref|ZP_06178214.1| putative lipoprotein [Vibrio harveyi 1DA3]
gi|269831389|gb|EEZ85536.1| putative lipoprotein [Vibrio harveyi 1DA3]
Length = 219
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
V E + Q + + + F +SSY + + L + +E D +I+G+ D
Sbjct: 93 SGVQVERVGENQLLLRMENGIGFSSSSYQLDASIHNTLRGVARILVEYPDTSLVIDGYTD 152
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + + L RRA +V Y V++ ++ R YG+ P + A NRR
Sbjct: 153 STGSDSYNQTLSERRAESVRQYLVSQNVAPGRAIARGYGERNPICSNQTSEGRACNRRVE 212
Query: 151 VFL 153
+ +
Sbjct: 213 IQI 215
>gi|262278657|ref|ZP_06056442.1| outer membrane protein [Acinetobacter calcoaceticus RUH2202]
gi|262259008|gb|EEY77741.1| outer membrane protein [Acinetobacter calcoaceticus RUH2202]
Length = 255
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 1/106 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
+ F++ S + A ++L + + I GH D G ++ L RA
Sbjct: 149 NRIIEFESGSAVLTDAGQKILDEMAVALNKVGGKKVKIVGHTDSSGDATKNLKLSQDRAL 208
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV NY +++ I A + G P + KNRR +
Sbjct: 209 AVKNYLISKSIPADHLSAEGLGSSKPVADNTSPEGRKKNRRIEFTV 254
>gi|237730722|ref|ZP_04561203.1| peptidoglycan-associated outer membrane lipoprotein [Citrobacter
sp. 30_2]
gi|226906261|gb|EEH92179.1| peptidoglycan-associated outer membrane lipoprotein [Citrobacter
sp. 30_2]
Length = 180
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 55/171 (32%), Positives = 81/171 (47%), Gaps = 19/171 (11%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKIS--------------SPDTVLNESSLQE 42
MQ + + I L + + + S N S S + E + +
Sbjct: 9 MQLNKVLKGLMIALPVMAIAACSSNKNASNDGSEGMLGAGTGMDANGSGNMSSEEQARLQ 68
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIAL 101
+ V+FD Y IR +L ++L + +EGHADE G+ +I+L
Sbjct: 69 MQQLQQNNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADERGTPEYNISL 128
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
G RRA AV Y +G+SA ++ + SYGKE P+V GHDE AYAKNRRA++
Sbjct: 129 GERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYAKNRRAVLV 179
>gi|222054259|ref|YP_002536621.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
gi|221563548|gb|ACM19520.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
Length = 242
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 52/113 (46%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIAL 101
++ ++ + FD +++ + LS + L+ + + +++GH D GS + L
Sbjct: 117 DKVYVALPSGILFDLGKDALKSGAKESLSKAAATLKASETNIVVQGHTDSTGSDAINQPL 176
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RRA V ++ A G+ A R+ YG P+V + A NRR + +
Sbjct: 177 SERRAKQVRDFLTANGVPAFRLTAVGYGSSRPAVANDTDANRALNRRVQLEIS 229
>gi|153867892|ref|ZP_01998087.1| OmpA family protein [Beggiatoa sp. SS]
gi|152144788|gb|EDN71913.1| OmpA family protein [Beggiatoa sp. SS]
Length = 170
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 57/131 (43%), Gaps = 3/131 (2%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-- 82
+T+ T ++ SVFF T + P Q ++ ++++D
Sbjct: 34 ETQSLQTSTQTWPVETDRGLQFTL-YSVFFKTGKAKLLPEGEQQITEFVELIQEYDDSRA 92
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
+EGH D GS+ + L RRA V N + +GI +R+ + +G++ P ++
Sbjct: 93 IAVEGHTDNRGSKAYNQRLSKRRAETVQNALITKGIEPNRLIIKGFGEKEPLTTNATKNG 152
Query: 143 YAKNRRAIVFL 153
+NRR + L
Sbjct: 153 RQQNRRVEIIL 163
>gi|317494692|ref|ZP_07953104.1| OmpA family protein [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316917294|gb|EFV38641.1| OmpA family protein [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 219
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD+SS +++PA L+ + L+++ + G+ D
Sbjct: 94 GTGVSVTRQGDNIILNMPNNVTFDSSSSTLKPAGANTLTGVAMVLKEYPKTAVNVVGYTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS++ ++ L +RA +V + + +G+ ASR++ G P + A+NRR
Sbjct: 154 STGSQDLNMRLSQQRADSVASALIVQGVEASRVRTQGMGPANPIASNSTAEGKAQNRRVE 213
Query: 151 VFLK 154
+ L
Sbjct: 214 ITLS 217
>gi|313112366|ref|ZP_07798128.1| hypothetical protein PA39016_004320000 [Pseudomonas aeruginosa
39016]
gi|310884630|gb|EFQ43224.1| hypothetical protein PA39016_004320000 [Pseudomonas aeruginosa
39016]
Length = 372
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 42/123 (34%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+ ++ ++ F ++S S+R +L + L K L+ GH+D
Sbjct: 244 VAVEDAVDRSVVTIRGDELFASASASVRDEFQPLLLRIADALRKVKGQVLVTGHSDNRPI 303
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
S+ L RA V + A A R P + A+NRR
Sbjct: 304 ATLRYPSNWKLSQARAQEVADLLGATTGDAGRFTAEGRSDTEPVATNASAEGRARNRRVE 363
Query: 151 VFL 153
+ +
Sbjct: 364 ITV 366
>gi|294339857|emb|CAZ88220.1| putative outer membrane OmpA/MotB protein [Thiomonas sp. 3As]
Length = 293
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 42/118 (35%), Gaps = 4/118 (3%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSS- 98
+ D+V F + ++ P +L+ + L+ + G D+
Sbjct: 134 TPLGVVIDIHDTVLFASGQAALTPQAQDLLNQIAGVLQGVAYPIQVNGFTDDRPINTPQF 193
Query: 99 ---IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AL RA +V F+ +G+ ++ YG+ P A NRR V +
Sbjct: 194 GSNWALSSARAVSVVEMFIEQGVKPEQLVAAGYGQYHPVESNDTAKGRAANRRVSVVI 251
>gi|170722824|ref|YP_001750512.1| flagellar motor protein MotD [Pseudomonas putida W619]
gi|169760827|gb|ACA74143.1| OmpA/MotB domain protein [Pseudomonas putida W619]
Length = 285
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 42/115 (36%), Gaps = 4/115 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ S+ F + ++ + + L+ +EG D L ++
Sbjct: 130 VEIELNSSLLFGSGDAMPSDKAFDIIEKVANILKPFANPVHVEGFTDNLPIRTAQYPTNW 189
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L RA ++ G++ +RM YG+ P + A+NRR ++ +
Sbjct: 190 ELSSARAASIVRLLAMEGVNPARMASVGYGEYQPVAGNDTAEGRARNRRVVLVIS 244
>gi|83746170|ref|ZP_00943224.1| Peptidoglycan-associated lipoprotein [Ralstonia solanacearum UW551]
gi|207744075|ref|YP_002260467.1| peptidoglycan-associated lipoprotein precursor [Ralstonia
solanacearum IPO1609]
gi|83727136|gb|EAP74260.1| Peptidoglycan-associated lipoprotein [Ralstonia solanacearum UW551]
gi|206595479|emb|CAQ62406.1| peptidoglycan-associated lipoprotein precursor [Ralstonia
solanacearum IPO1609]
Length = 172
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/137 (31%), Positives = 72/137 (52%), Gaps = 5/137 (3%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+ +G D + + L + S SV+FD SY+++ +LS +L
Sbjct: 39 AATGADTRNVTPVD----VTRDELTDPNSPLAKRSVYFDFDSYTVKSEYQGLLSQHARYL 94
Query: 77 EKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+ H LI+G+ DE G+ ++ALG +RA AV ++G+ S+M+ S GKE P
Sbjct: 95 QSHNQRKVLIQGNTDERGTSEYNLALGQKRAEAVRRALSSQGVPDSQMEAVSLGKEKPQA 154
Query: 136 YGHDEDAYAKNRRAIVF 152
GHDE+++A+NRR+ +
Sbjct: 155 TGHDEESWAQNRRSDIV 171
>gi|329928770|ref|ZP_08282619.1| putative chemotaxis protein MotB [Paenibacillus sp. HGF5]
gi|328937551|gb|EGG33969.1| putative chemotaxis protein MotB [Paenibacillus sp. HGF5]
Length = 271
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 41/122 (33%), Gaps = 6/122 (4%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE-----L 92
S + + ++ D FD ++P VL L S + IEGH D
Sbjct: 144 SDEPQGIAITLSDRFLFDVGKAELKPGAAPVLGKLASLFGDLNTTVSIEGHTDNVPIGRY 203
Query: 93 GSRNSSIALGLRRAYAVFNY-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
S + L RA +V + + + Y P+ + KNRR +
Sbjct: 204 SSYKDNWELSGARAMSVLRFFLEHSKLDPGGFQYAGYADTRPAADNATAEGKQKNRRVEI 263
Query: 152 FL 153
+
Sbjct: 264 TV 265
>gi|319793582|ref|YP_004155222.1| type IV / vi secretion system protein, dotu family [Variovorax
paradoxus EPS]
gi|315596045|gb|ADU37111.1| type IV / VI secretion system protein, DotU family [Variovorax
paradoxus EPS]
Length = 456
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 44/126 (34%), Gaps = 4/126 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ +L ++ + F + S + + VLS + L + + L+ G +D+
Sbjct: 316 EGLLTVRDEADRSVVVLRGDGLFASGSDRVLDRYVPVLSRVADALNSVEGNVLVSGFSDD 375
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
S+ L RA +V R R++ G P A+NR
Sbjct: 376 QPIRSVRFPSNWQLSQARADSVKKMLAVRITRPERLRAEGRGDADPLAPNDSPANRARNR 435
Query: 148 RAIVFL 153
R V L
Sbjct: 436 RVEVTL 441
>gi|261409603|ref|YP_003245844.1| OmpA/MotB domain-containing protein [Paenibacillus sp. Y412MC10]
gi|261286066|gb|ACX68037.1| OmpA/MotB domain protein [Paenibacillus sp. Y412MC10]
Length = 271
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 42/122 (34%), Gaps = 6/122 (4%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE-----L 92
S + + ++ D FD ++P VL L S + IEGH D
Sbjct: 144 SDEPQGIAITLSDRFLFDVGKAELKPGAAPVLGKLASLFGDLNTTVSIEGHTDNVPIGRY 203
Query: 93 GSRNSSIALGLRRAYAVFNY-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
S + L RA +V + + + + Y P+ + KNRR +
Sbjct: 204 SSYKDNWELSGARAMSVLRFFLEHSKLDPAGFQYAGYADTRPAADNATAEGKQKNRRVEI 263
Query: 152 FL 153
+
Sbjct: 264 TV 265
>gi|171319575|ref|ZP_02908672.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria MEX-5]
gi|171095186|gb|EDT40181.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria MEX-5]
Length = 133
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/132 (32%), Positives = 68/132 (51%), Gaps = 1/132 (0%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CD 82
T S + L S S++FD YS++P +L + +L H
Sbjct: 2 APTPSSEAVATVTTDDLNNPNSPLAKRSIYFDFDQYSVKPEFQSLLQSHADYLRNHPSRR 61
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
LI+G+ DE G+ ++ALG RR+ AV + G+ A++++ S GKE P GHDED+
Sbjct: 62 VLIQGNTDERGTSEYNLALGQRRSQAVMSALETLGVQATQLEAVSLGKEKPVALGHDEDS 121
Query: 143 YAKNRRAIVFLK 154
+A+NRRA + +
Sbjct: 122 WAQNRRADLVYR 133
>gi|150024266|ref|YP_001295092.1| OmpA family outer membrane protein P60 [Flavobacterium
psychrophilum JIP02/86]
gi|113927364|emb|CAL07968.2| outer membrane protein A [Flavobacterium psychrophilum JIP02/86]
gi|149770807|emb|CAL42272.1| Outer membrane protein OmpA family P60 [Flavobacterium
psychrophilum JIP02/86]
Length = 465
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 62/138 (44%), Gaps = 6/138 (4%)
Query: 22 DNLDTKISSPDTVLNE--SSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLS-NLGSW 75
D D + TV N + E+ + D ++ FD + ++ + + +L +
Sbjct: 326 DKDDKCPTVKGTVANNGCPEVSEEAIKKLNDYAKTILFDNAKFTFQKQTLPILDAMVAIL 385
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
E F IEG+ D G + ++ L RA AV ++ +++GIS+ R+ YG MP
Sbjct: 386 NEFPTSKFSIEGNTDNSGKKATNQTLSENRAKAVADFLISKGISSDRLTSIGYGDSMPIA 445
Query: 136 YGHDEDAYAKNRRAIVFL 153
+ A+NRR V +
Sbjct: 446 SNKTKAGKAQNRRVEVKV 463
>gi|194336698|ref|YP_002018492.1| OmpA/MotB domain protein [Pelodictyon phaeoclathratiforme BU-1]
gi|194309175|gb|ACF43875.1| OmpA/MotB domain protein [Pelodictyon phaeoclathratiforme BU-1]
Length = 229
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 50/133 (37%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
D +I + E + F T S +I + L ++
Sbjct: 80 DKQAAEIDHDVEGARVERVGEGIRVIFDSGILFSTGSATITSTSRYNIEKLARILNRYNE 139
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+IEGH D +GS +++ +L RRA +V N A +S R+ YG+ P E
Sbjct: 140 TSLVIEGHTDSIGSDDANQSLSERRADSVANLLEAYRVSGRRLSPIGYGETRPVSSNETE 199
Query: 141 DAYAKNRRAIVFL 153
NRR V +
Sbjct: 200 YGRKLNRRVEVLI 212
>gi|317153907|ref|YP_004121955.1| OmpA/MotB domain-containing protein [Desulfovibrio aespoeensis
Aspo-2]
gi|316944158|gb|ADU63209.1| OmpA/MotB domain protein [Desulfovibrio aespoeensis Aspo-2]
Length = 380
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 50/121 (41%), Gaps = 4/121 (3%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSR 95
L + V + FD +IRP +L LG L ++ GH D G
Sbjct: 260 DLLRPQVNGVNLDIQFDFDKDTIRPESYPLLDALGEALNTQQLKGRSIIVGGHTDSRGDD 319
Query: 96 NSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
++AL RRA AV Y V + A ++ +GK P G +A KNRR + L
Sbjct: 320 AYNLALSKRRANAVKAYLVNKWGVAQDLIEAVGFGKTRPIAAGSTTEAMRKNRRVEIRLA 379
Query: 155 G 155
G
Sbjct: 380 G 380
>gi|126662605|ref|ZP_01733604.1| possible outer membrane protein [Flavobacteria bacterium BAL38]
gi|126625984|gb|EAZ96673.1| possible outer membrane protein [Flavobacteria bacterium BAL38]
Length = 467
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 6/138 (4%)
Query: 22 DNLDTKISSPDTVLNE--SSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNL-GSW 75
D D + TV N + + + D ++ F++ S + I VL +
Sbjct: 328 DKDDKCPTVAGTVANNGCPEVSDDTMKKLNDYGKTILFNSGKASFQKQTIPVLQAMTAIL 387
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
E F +EGH D G+ + L RA AV N+ V GI ASR+ +G+ MP
Sbjct: 388 KEYPTAKFSLEGHTDSTGADALNQKLSEERAAAVKNFLVENGIDASRLSSKGFGESMPVD 447
Query: 136 YGHDEDAYAKNRRAIVFL 153
A NRR V L
Sbjct: 448 SNKTAKGKANNRRVEVKL 465
>gi|74316262|ref|YP_314002.1| outer membrane protein [Thiobacillus denitrificans ATCC 25259]
gi|74055757|gb|AAZ96197.1| probable outer membrane protein [Thiobacillus denitrificans ATCC
25259]
Length = 331
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/123 (27%), Positives = 51/123 (41%), Gaps = 2/123 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADE 91
LN ++GD V F + + P ++ + L +L++++ LIEGH D
Sbjct: 197 QALNAKKTDRGLVVTLGD-VLFGVNKADLTPGGMRNVQKLADFLKQYETRKLLIEGHTDS 255
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
G + AL RRA AV + G+ R+ YGK P + NRR V
Sbjct: 256 TGGDALNQALSERRAEAVKTALIGMGVDGERIATRGYGKAFPVASNNTAAGRQLNRRVEV 315
Query: 152 FLK 154
L
Sbjct: 316 VLS 318
>gi|167625617|ref|YP_001675911.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis
HAW-EB4]
gi|167355639|gb|ABZ78252.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4]
Length = 224
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 49/125 (39%), Gaps = 1/125 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHA 89
+ ++ + + ++ + V F + QVL+++ E + + G+
Sbjct: 95 QSSGVSVTRSGDNIILNMPNDVTFGVDQTDLSQRAQQVLNSVVLVALEYDETKLNVMGYT 154
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G+ + ++ L RA V NY + A R+ G+ P + A+NRR
Sbjct: 155 DSSGAESYNLRLSQVRASEVANYLTNHKVPAQRVASHGMGESKPIASNQTKQGRAENRRV 214
Query: 150 IVFLK 154
+ L
Sbjct: 215 EIILS 219
>gi|152969879|ref|YP_001334988.1| putative outer membrane protein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|150954728|gb|ABR76758.1| putative outer membrane protein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
Length = 568
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 44/115 (38%), Gaps = 2/115 (1%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSI 99
+ FDT + ++P + L N L + ++ GH D +G ++
Sbjct: 426 VAPNVIRLDSMSLFDTGKWVLKPGSTKRLVNSLMDIKARPGWLIVVAGHTDSVGEEKANQ 485
Query: 100 ALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L L+RA +V ++ G V YG+ P + A NRR + L
Sbjct: 486 LLSLKRAESVRDWMRDTGDVPDSCFAVQGYGESRPIATNDTPEGRALNRRVEISL 540
>gi|330808241|ref|YP_004352703.1| flagellar motor protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327376349|gb|AEA67699.1| flagellar motor protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 294
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 43/115 (37%), Gaps = 4/115 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ S+ F + ++ + + L+ D +EG D+ ++
Sbjct: 129 VEIELNSSLLFGSGDAMPSDMAFNIIDKVAAILKPFDNPIHVEGFTDDQPIRTAQYPTNW 188
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L R+ ++ +G++ R+ YG+ P + A+NRR ++ +
Sbjct: 189 ELSSARSASIVRMLAMQGVNPGRLASVGYGEFQPVANNATAEGRARNRRVVLVVS 243
>gi|300112859|ref|YP_003759434.1| peptidoglycan-associated lipoprotein [Nitrosococcus watsonii C-113]
gi|299538796|gb|ADJ27113.1| peptidoglycan-associated lipoprotein [Nitrosococcus watsonii C-113]
Length = 187
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/138 (31%), Positives = 66/138 (47%), Gaps = 1/138 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
++ T L + S V+F+ S I+ D ++ G + +
Sbjct: 50 EEESATTWGIGEGAAYEGDPLADPASPLASRVVYFEFDSSEIQQDDRPIVEAHGGYLAKH 109
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
D ++EGH DE GSR ++ALG RRA AV + + G S +++V SYG+E P+V G
Sbjct: 110 PDIKIILEGHTDERGSREYNLALGERRANAVRSLILLMGASEEQVEVVSYGEERPAVDGQ 169
Query: 139 DEDAYAKNRRAIVFLKGC 156
DE A+ NRR + G
Sbjct: 170 DEGAWQLNRRVEILYPGE 187
>gi|158522220|ref|YP_001530090.1| peptidoglycan-associated lipoprotein [Desulfococcus oleovorans
Hxd3]
gi|158511046|gb|ABW68013.1| Peptidoglycan-associated lipoprotein [Desulfococcus oleovorans
Hxd3]
Length = 181
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 27/181 (14%)
Query: 1 MQYSTIFI----ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSS--------- 47
M+ +F+ + + ++ K + + S ++ S
Sbjct: 1 MEKKRLFVMFVMLFAICGLLFTVSCAKQSVKSEATELETESSLAADEASQMAAEEMAEAE 60
Query: 48 -------------VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELG 93
V +++ FD ++ PA ++L +WL + D ++EGH DE G
Sbjct: 61 AIAAEKAAARHAFVNENIHFDFDKSTLTPAAREILRTKATWLRDNSDAAVVVEGHCDERG 120
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ ++ALG RRA A ++ V GISASR+ SYG+E P +E A+AKNRRA L
Sbjct: 121 TTEYNLALGDRRAKAAKDFLVDMGISASRLSTISYGEERPLDPRSNETAWAKNRRAQFVL 180
Query: 154 K 154
+
Sbjct: 181 R 181
>gi|318057618|ref|ZP_07976341.1| secreted protein [Streptomyces sp. SA3_actG]
Length = 196
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 50/143 (34%), Gaps = 1/143 (0%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVL 69
L+ ++ + + ++ + + ++ V FD +++ P+ +
Sbjct: 48 LADGAQLASAKVLDIKSVVEDLGGEERREDTNTDVKFALQAEVLFDKDKFALDPSGRARI 107
Query: 70 SNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
+G +K + G D LGS L RRA V + +V Y
Sbjct: 108 KAIGEEAKKQRARTVRVFGFTDNLGSYAHGKTLSKRRADIVHDELAQYLGPEVTFEVRGY 167
Query: 129 GKEMPSVYGHDEDAYAKNRRAIV 151
++ P E+ KNRR V
Sbjct: 168 SEDYPIADNTTEEGRRKNRRVEV 190
>gi|15596238|ref|NP_249732.1| outer membrane protein precursor [Pseudomonas aeruginosa PAO1]
gi|116048969|ref|YP_792229.1| hypothetical protein PA14_50880 [Pseudomonas aeruginosa UCBPP-PA14]
gi|152988234|ref|YP_001349691.1| hypothetical protein PSPA7_4338 [Pseudomonas aeruginosa PA7]
gi|218892997|ref|YP_002441866.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
LESB58]
gi|254234177|ref|ZP_04927500.1| hypothetical protein PACG_00011 [Pseudomonas aeruginosa C3719]
gi|254239398|ref|ZP_04932720.1| hypothetical protein PA2G_00011 [Pseudomonas aeruginosa 2192]
gi|296390597|ref|ZP_06880072.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
PAb1]
gi|313105992|ref|ZP_07792253.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
39016]
gi|9946954|gb|AAG04430.1|AE004536_9 probable outer membrane protein precursor [Pseudomonas aeruginosa
PAO1]
gi|115584190|gb|ABJ10205.1| probable outer membrane protein precursor [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126166108|gb|EAZ51619.1| hypothetical protein PACG_00011 [Pseudomonas aeruginosa C3719]
gi|126192776|gb|EAZ56839.1| hypothetical protein PA2G_00011 [Pseudomonas aeruginosa 2192]
gi|150963392|gb|ABR85417.1| probable outer membrane protein [Pseudomonas aeruginosa PA7]
gi|218773225|emb|CAW29037.1| probable outer membrane protein precursor [Pseudomonas aeruginosa
LESB58]
gi|310878755|gb|EFQ37349.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
39016]
Length = 210
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 3/110 (2%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNSSIALGLRR 105
V + F S + AD + L+ + L+ I GH D +GS + L RR
Sbjct: 99 VVRDLHFAFDSSKVDAADSEKLNGIAERLKGEAASTRLSITGHTDSVGSDAYNQKLSERR 158
Query: 106 AYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
A AV NY + G+ +S + V G+ P + A+NRR + +K
Sbjct: 159 ANAVANYLIDAGVPSSIIVGVQGLGESQPVADNKTREGRAENRRVEILIK 208
>gi|319426588|gb|ADV54662.1| OmpA/MotB domain protein [Shewanella putrefaciens 200]
Length = 288
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-F 83
+ +LN + + ++GD V FDT +++ + Q L+NL ++L K+
Sbjct: 152 SDDAQAQLALLNARESERGWVVTLGD-VLFDTGKANLKSSTSQHLTNLATFLGKYPQRGA 210
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
+IEG+ D +G+ ++ L RRA +V N+ A+G+ +SR+ G+ P
Sbjct: 211 IIEGYTDSVGTEEYNLGLSERRADSVSNFLQAQGVQSSRLSSQGKGESFPVANNESASGR 270
Query: 144 AKNRRAIVFLKGC 156
+NRR V +
Sbjct: 271 QQNRRVEVIITNA 283
>gi|296390513|ref|ZP_06879988.1| hypothetical protein PaerPAb_20266 [Pseudomonas aeruginosa PAb1]
Length = 158
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/155 (20%), Positives = 57/155 (36%), Gaps = 8/155 (5%)
Query: 7 FIILSAITM-MSISGIDNLDTKI---SSPDTVLNESS---LQEQFSSSVGDSVFFDTSSY 59
+ L+ ++ + ++G + + VL E E + + V F +
Sbjct: 1 MLALALFSLVLGLAGCQTKPPQTGLSAEQIAVLQEQGFELRDEGWEFGMSSKVLFGNNLD 60
Query: 60 SIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI 118
+ P L+ + L D +EGH D G + L RRA +V F G+
Sbjct: 61 RLNPDSRNTLTKIAHALLAVDIDKVRLEGHTDNYGDEGYNQKLSERRAESVAAVFREAGM 120
Query: 119 SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
A+ ++V G P ++NRR + +
Sbjct: 121 PAANIEVRGLGMSKPVADNKTRAGRSENRRVAIIV 155
>gi|16127459|ref|NP_422023.1| OmpA family protein [Caulobacter crescentus CB15]
gi|221236272|ref|YP_002518709.1| peptidoglycan-associated lipoprotein pal [Caulobacter crescentus
NA1000]
gi|13424913|gb|AAK25191.1| OmpA family protein [Caulobacter crescentus CB15]
gi|220965445|gb|ACL96801.1| peptidoglycan-associated lipoprotein pal [Caulobacter crescentus
NA1000]
Length = 188
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 45/111 (40%), Positives = 66/111 (59%), Gaps = 1/111 (0%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRN 96
+ F ++GD V+FDT Y IR VL+ W IEG+ADE G+R
Sbjct: 67 PGSVQDFVVNIGDRVYFDTDEYVIRADAQPVLAGQAQWLNRYSSVRIRIEGNADERGTRE 126
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
++ALG RRA AV ++ +A+G+S++R++ S+GKE P G E+A+AKNR
Sbjct: 127 YNLALGARRANAVRDFLIAQGVSSARIETISFGKERPIDPGSSEEAWAKNR 177
>gi|83945760|ref|ZP_00958104.1| OmpA family protein [Oceanicaulis alexandrii HTCC2633]
gi|83850850|gb|EAP88711.1| OmpA family protein [Oceanicaulis alexandrii HTCC2633]
Length = 217
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 50/123 (40%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
+ + + + V F T+S I VL+++ L + + GHAD
Sbjct: 90 GSGVTVRRVGNDLYLVMPGDVTFATNSAQIDQRFGPVLNDVADVLMTYPATYVDVIGHAD 149
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
+G + + L RRA +V +ARG+ R+ V G+ P + A NRR
Sbjct: 150 SVGDASYNQTLSERRASSVAAELIARGVMRDRLYVAGMGESQPIASNDTDSGRAANRRVE 209
Query: 151 VFL 153
+ +
Sbjct: 210 IKI 212
>gi|170727075|ref|YP_001761101.1| peptidoglycan-associated lipoprotein [Shewanella woodyi ATCC 51908]
gi|169812422|gb|ACA87006.1| peptidoglycan-associated lipoprotein [Shewanella woodyi ATCC 51908]
Length = 178
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 51/177 (28%), Positives = 77/177 (43%), Gaps = 25/177 (14%)
Query: 1 MQYSTIF-IILSAITMMSISGIDNL-----------------------DTKISSPDTVLN 36
M + +F +L AI MM+IS + +T +P
Sbjct: 1 MDLNKLFKAMLVAIPMMAISACSSTSDSETDATSSNSSSGSELTTGGVETGGVAPVLTPQ 60
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
E + ++FD S+ +VL G + +E + +IEGHADE G+
Sbjct: 61 EQQRLKYQELRKEHIIYFDFDRSSVSAQFAEVLQAHGEYLIEHPNVRVMIEGHADERGTP 120
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+IALG RRA AV Y G+ S+M + SYG+E P +D +A NRRA++
Sbjct: 121 EYNIALGERRAKAVAKYLQGMGVLPSQMSIVSYGEEKPLDMSRTDDGFAVNRRAVLV 177
>gi|330873229|gb|EGH07378.1| ompA family protein [Pseudomonas syringae pv. morsprunorum str.
M302280PT]
Length = 229
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIE 86
S +T + +Q + ++ F T S +I + L+NL + + + + I
Sbjct: 95 ASMANTGVEVQRQGDQIKLIMPGNITFATDSSAIASSFYSPLNNLANSLKQFNQNNIEII 154
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
G+ D GSR ++ L +RA +V Y ++G+ S + V G + P D + A+N
Sbjct: 155 GYTDSTGSRQHNMDLSQQRAQSVATYLTSQGVDQSHLSVRGAGPDQPIASNADTNGRAQN 214
Query: 147 RRAIVFLK 154
RR V LK
Sbjct: 215 RRVEVNLK 222
>gi|262276102|ref|ZP_06053911.1| peptidoglycan-associated outer membrane lipoprotein [Grimontia
hollisae CIP 101886]
gi|262219910|gb|EEY71226.1| peptidoglycan-associated outer membrane lipoprotein [Grimontia
hollisae CIP 101886]
Length = 173
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 47/166 (28%), Positives = 72/166 (43%), Gaps = 16/166 (9%)
Query: 3 YSTIFIILSAITMMSI---------------SGIDNLDTKISSPDTVLNESSLQEQFSSS 47
++ + L T+ + +G
Sbjct: 7 LKSLAVALPMFTLAACSSSDSSTDSTGTETNTGSQTTVVTPVDGGQGGLTEQEIRNNELR 66
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRA 106
+V+F YS+ P +L +L + D ++EGHADE G+ +IALG RRA
Sbjct: 67 QSQTVYFSFDDYSVLPQFEDMLDAHAEFLRANADIKVVVEGHADERGTPEYNIALGERRA 126
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
AV Y A G+ +S++ + SYG+E P V G EDAY+KNRRA++
Sbjct: 127 NAVAKYLQALGVPSSQISIVSYGEEKPLVLGQGEDAYSKNRRAVLV 172
>gi|261838454|gb|ACX98220.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
51]
gi|315587014|gb|ADU41395.1| peptidoglycan associated lipoprotein [Helicobacter pylori 35A]
gi|317178572|dbj|BAJ56360.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
F30]
gi|317182379|dbj|BAJ60163.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
F57]
Length = 179
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 76/177 (42%), Gaps = 24/177 (13%)
Query: 1 MQYSTIFIILSAITMMSIS-------------GIDNLDTKISSPDTVLNESSLQEQFSSS 47
M+ S++F L A ++ + + S +TV + +++ +
Sbjct: 1 MKRSSVFSFLVAFLFIAGCKHNMDKETVAGDVSAKAVQSAPVSTETVQEKQEPKQEPAPV 60
Query: 48 VGDS-----------VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRN 96
V + ++FD Y I+ +D + L + +++ L+EG+ DE GS
Sbjct: 61 VEEKPAVESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEFGSSE 120
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ ALG++R +V N V +G+ +K S+G+ P + Y +NRR V L
Sbjct: 121 YNQALGVKRTLSVKNALVIKGVEKDMIKTISFGETKPKCTQKTRECYKENRRVDVKL 177
>gi|237799776|ref|ZP_04588237.1| OmpA/MotB [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331022631|gb|EGI02688.1| OmpA/MotB [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 229
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 1/125 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHA 89
+T + +Q + ++ F T S +I + L+NL S + + + I G+
Sbjct: 98 ANTGVEVQRQGDQIKLIMPGNITFATDSSAIASSFYSPLNNLASSLKQFNQNNIEIVGYT 157
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GSR ++ L +RA +V Y ++G+ + + V G + P D + A+NRR
Sbjct: 158 DSTGSRQHNMDLSQQRAQSVATYLTSQGVDQTHLSVRGAGPDQPIASNADVNGRAQNRRV 217
Query: 150 IVFLK 154
V LK
Sbjct: 218 EVNLK 222
>gi|152981732|ref|YP_001352854.1| OmpA family protein [Janthinobacterium sp. Marseille]
gi|151281809|gb|ABR90219.1| OmpA family protein [Janthinobacterium sp. Marseille]
Length = 229
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 47/135 (34%), Gaps = 1/135 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
+ + V + + + + F T I P+ +L + ++
Sbjct: 76 NQKRAMEQATQGTGVQVSQTSDNRLKLEIPSDISFATGRSDINPSLQPILDRFATGLVDN 135
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
I GH D GS + L RA +Y RG++ R+ V G P
Sbjct: 136 PTATVTIIGHTDSTGSDAINNPLSFDRASRTRDYLTGRGVAPQRIYVDGRGSHEPIASNA 195
Query: 139 DEDAYAKNRRAIVFL 153
D A+NRR +F+
Sbjct: 196 DAAGRARNRRVEIFV 210
>gi|126643008|ref|YP_001085992.1| putative lipoprotein precursor [Acinetobacter baumannii ATCC 17978]
gi|184159508|ref|YP_001847847.1| outer membrane protein [Acinetobacter baumannii ACICU]
gi|183211102|gb|ACC58500.1| Outer membrane protein [Acinetobacter baumannii ACICU]
Length = 126
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 48/115 (41%), Gaps = 1/115 (0%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSS 98
E ++ + + + FD + +++ + L+ L + + I GH D++G+ +
Sbjct: 10 TNEGWTLGLPERLLFDFNDATLKQSHEAELTRLANQLNKYDLNKLKIVGHTDDVGNPEYN 69
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V N F+ G + V G P V + A NRR + +
Sbjct: 70 QKLSEERAQSVANLFLTHGFKKENIYVIGRGSTQPYVPNTTNENRAINRRVAIVI 124
>gi|71733414|ref|YP_273324.1| ompA family protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|289627857|ref|ZP_06460811.1| ompA family protein [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289648335|ref|ZP_06479678.1| ompA family protein [Pseudomonas syringae pv. aesculi str. 2250]
gi|71553967|gb|AAZ33178.1| ompA family protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|330868443|gb|EGH03152.1| ompA family protein [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330988549|gb|EGH86652.1| ompA family protein [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|331008919|gb|EGH88975.1| ompA family protein [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 229
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIE 86
S +T + +Q + ++ F T S +I + L+NL + + + + I
Sbjct: 95 ASMANTGVEVQRQGDQIKLIMPGNITFATDSSAIASSFYSPLNNLANSLKQFNQNNIEIV 154
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
G+ D GSR ++ L +RA +V Y ++G+ S + V G + P D + A+N
Sbjct: 155 GYTDSTGSRQHNMDLSQQRAQSVATYLTSQGVDQSHLSVRGAGPDQPIASNADVNGRAQN 214
Query: 147 RRAIVFLK 154
RR V LK
Sbjct: 215 RRVEVNLK 222
>gi|148546401|ref|YP_001266503.1| OmpA/MotB domain-containing protein [Pseudomonas putida F1]
gi|148510459|gb|ABQ77319.1| OmpA/MotB domain protein [Pseudomonas putida F1]
Length = 239
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 1/106 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
+V F S + A Q L + + GH D +GS + + AL RRA
Sbjct: 133 NGAVMFAFDSAELTLAAQQRLQGLVAKLNSPTVTKVRVIGHTDGVGSDSYNQALSERRAS 192
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+V Y + +G+ ++ G+ P E+ A+NRR + L
Sbjct: 193 SVAEYLIGQGLEMGKVTSQGRGESEPVTDNETEEGRARNRRVELHL 238
>gi|312884285|ref|ZP_07743994.1| hypothetical protein VIBC2010_10946 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309368058|gb|EFP95601.1| hypothetical protein VIBC2010_10946 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 125
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Query: 54 FDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F+ S + + + L NL ++ E I G+ D G ++ L RA AV +Y
Sbjct: 20 FEFDSCKLTQSVAERLDNLANFLNEYPTSRVAITGYTDSSGPAAYNLKLSEMRAQAVKDY 79
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ GI +R+ T G+ P + KNRR V +
Sbjct: 80 LISAGIEEARLTATGLGENNPVADNCTHEGREKNRRVEVVI 120
>gi|304413884|ref|ZP_07395301.1| peptidoglycan-associated lipoprotein [Candidatus Regiella
insecticola LSR1]
gi|304283604|gb|EFL91999.1| peptidoglycan-associated lipoprotein [Candidatus Regiella
insecticola LSR1]
Length = 170
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 49/169 (28%), Positives = 78/169 (46%), Gaps = 17/169 (10%)
Query: 1 MQYST----IFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSS---------- 46
MQ + + ++L + + + S T S+ D + + S
Sbjct: 1 MQLNKALKGLMLVLPILVVTACSSNKRGTTDQSAIDPNAATLGMDRENLSGGSSREDQMQ 60
Query: 47 --SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGL 103
+ ++F Y I +L+ ++L +IEG+ADE G+ +IALG
Sbjct: 61 RLQRQNIIYFGYDKYDISAESTSILNEHAAFLRADPAIKIVIEGYADERGTPEYNIALGE 120
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
RRA AV Y +G+S ++ + SYGK P GHDE+AYAKNRRA++
Sbjct: 121 RRANAVSMYLRGQGVSNQQISIVSYGKLKPVDLGHDENAYAKNRRAVLV 169
>gi|291615624|ref|YP_003518366.1| YiaD [Pantoea ananatis LMG 20103]
gi|291150654|gb|ADD75238.1| YiaD [Pantoea ananatis LMG 20103]
Length = 237
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD+SS S++PA L+ + L+++ + GH D
Sbjct: 111 GTGVSVTRQGDNIVLNMPNNVTFDSSSSSLKPAGANTLTGVAMVLKEYPKTAVNVVGHTD 170
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GSR ++ L +RA +V + + +G++ +R+ G + P E A+NRR
Sbjct: 171 STGSRALNMRLSQQRAESVASALIVQGVAGNRLHTQGAGPDSPVATNSTEAGKAQNRRVE 230
Query: 151 VFLK 154
+ L
Sbjct: 231 ITLS 234
>gi|82701882|ref|YP_411448.1| OmpA/MotB [Nitrosospira multiformis ATCC 25196]
gi|82409947|gb|ABB74056.1| OmpA/MotB [Nitrosospira multiformis ATCC 25196]
Length = 225
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 1/129 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FL 84
+ ++ V + + + + FDT IRP VL + + L +
Sbjct: 87 EQATAGTGVEVVKTSDNRLRLDIPSDISFDTGRADIRPNFRPVLDSFATSLNNNPITEVT 146
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
I GH D GS + L L RA + +Y +RG+S +R+++ G P V A
Sbjct: 147 IIGHTDSSGSDAVNNPLSLNRAASTRDYLASRGVSPNRVRIEGRGSREPIVANDTPQNRA 206
Query: 145 KNRRAIVFL 153
+NRR +++
Sbjct: 207 RNRRVEIYV 215
>gi|78189866|ref|YP_380204.1| OmpA domain-containing protein [Chlorobium chlorochromatii CaD3]
gi|78172065|gb|ABB29161.1| OmpA domain protein [Chlorobium chlorochromatii CaD3]
Length = 205
Score = 79.1 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 1/132 (0%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC- 81
++ + +Q+ +FF+ S ++ + L + L++
Sbjct: 71 TPSATTTTLVPATVKGYGYDQWQKGPLGDIFFEYDSATLDESAQMQLQQNAALLQQFIVE 130
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
IEGH D G+ ++ALG RRA Y + G+ ASR++ S+G+E P G+ ED
Sbjct: 131 SIQIEGHCDIRGTSEYNLALGERRATTAKEYLMRLGVPASRLETVSFGEERPFDNGNSED 190
Query: 142 AYAKNRRAIVFL 153
A+AKNRR L
Sbjct: 191 AWAKNRRVHFVL 202
>gi|325123093|gb|ADY82616.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter
calcoaceticus PHEA-2]
Length = 186
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 17/166 (10%)
Query: 3 YSTIFIILSAITMMSISGI-------DNLDTKISSPDTVLNESS---------LQEQFSS 46
+ ++ ++++ + ++T S D LN + + ++
Sbjct: 11 FLSVALVMTGCASRKPAATTTTGTNPSTVNTSGLSEDAALNAQNLAGASSKGVTEANKAA 70
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRR 105
V FD S + D Q L + + + + GH DE G+R ++ALG RR
Sbjct: 71 LAKRVVHFDYDSSDLSTEDYQTLQAHAQFLIANANSKVALTGHTDERGTREYNMALGERR 130
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
A AV +Y + G++ +++ SYGKE P GHDE A+ +NRR +
Sbjct: 131 AKAVQSYLITNGVNPQQLEAVSYGKEAPVNAGHDESAWKENRRVEI 176
>gi|290559940|pdb|2KGW|A Chain A, Solution Structure Of The Carboxy-Terminal Domain Of
Ompatb, A Pore Forming Protein From Mycobacterium
Tuberculosis
Length = 129
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 1/117 (0%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRN 96
+ LQ ++ G + F S+ PAD ++L+ + L+ I G+ D GS
Sbjct: 12 ADLQSAINAVTGGPIAFGNDGASLIPADYEILNRVADKLKACPDARVTINGYTDNTGSEG 71
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+I L +RA V +Y VARG++ + G P + AKNRR + +
Sbjct: 72 INIPLSAQRAKIVADYLVARGVAGDHIATVGLGSVNPIASNATPEGRAKNRRVEIVV 128
>gi|255067633|ref|ZP_05319488.1| membrane protein, OmpA family [Neisseria sicca ATCC 29256]
gi|255048107|gb|EET43571.1| membrane protein, OmpA family [Neisseria sicca ATCC 29256]
Length = 546
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 2/112 (1%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALG 102
++ F+T + ++ + L L + D L+EGH D +G+ S+ L
Sbjct: 429 VVITLDSLALFETGQFELKNNANKALIGALKAIESHPDTRILVEGHTDNVGNPVSNQQLS 488
Query: 103 LRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+RA +V ++ V R +V G P E+ AKNRR + L
Sbjct: 489 EKRAQSVKDWLVISSNVPESRFEVKGLGDTKPIADNQTEEGKAKNRRVEIIL 540
>gi|238894412|ref|YP_002919146.1| putative outer membrane protein [Klebsiella pneumoniae NTUH-K2044]
gi|238546728|dbj|BAH63079.1| putative outer membrane protein [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 568
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 44/115 (38%), Gaps = 2/115 (1%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSI 99
+ FDT + ++P + L + L + ++ GH D +G ++
Sbjct: 426 VAPDVIRLDSMSLFDTGKWVLKPGSTKRLVSSLMDIKARPGWLIVVAGHTDSVGEEKANQ 485
Query: 100 ALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L L+RA +V ++ G V YG+ P + A NRR + L
Sbjct: 486 LLSLKRAESVRDWMRDTGDVPDSCFAVQGYGESRPIATNDTPEGRALNRRVEISL 540
>gi|332707360|ref|ZP_08427410.1| peptidoglycan-associated lipoprotein [Lyngbya majuscula 3L]
gi|332353851|gb|EGJ33341.1| peptidoglycan-associated lipoprotein [Lyngbya majuscula 3L]
Length = 287
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 55/147 (37%), Gaps = 3/147 (2%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLN--ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQ 67
+ AIT++ ++ N + ++ ++ + F+ S ++RP
Sbjct: 140 IQAITLLLKEPSTPSSNAPLVGNSNGNRLAALAADKLKVTLPSDILFEESKSTLRPEAGL 199
Query: 68 VLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT 126
+L + + L+ + I H D + L RA AV Y + + R +
Sbjct: 200 ILDKIVTDLQAYPSSTIRIAIHTDNPREAKENRNLSFERAKAVQQYLSSALDDSYRWLII 259
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVFL 153
YG+ P V E +NRR + +
Sbjct: 260 GYGETRPLVANDTEVNQQRNRRVEIAV 286
>gi|332558675|ref|ZP_08412997.1| MotB [Rhodobacter sphaeroides WS8N]
gi|332276387|gb|EGJ21702.1| MotB [Rhodobacter sphaeroides WS8N]
Length = 366
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 49/129 (37%), Gaps = 5/129 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
+ ++ + S+G F + S + P V++ + + + GH D
Sbjct: 235 AEGLVKVEQTDGKVFVSLGAGGSFPSGSDDLTPDARAVMARIAEATRNPERTITVTGHTD 294
Query: 91 ELG----SRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ + +IAL RA +V VA + R+ S G+ P E+ A+
Sbjct: 295 NVPVSGGAFRDNIALAAGRAASVVRELVASGSVDPGRITAVSRGEFDPVADNATEEGRAQ 354
Query: 146 NRRAIVFLK 154
NRR + +
Sbjct: 355 NRRIEIEIS 363
>gi|95117797|gb|ABF57086.1| Omp22 [Helicobacter pylori]
Length = 179
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/177 (24%), Positives = 73/177 (41%), Gaps = 24/177 (13%)
Query: 1 MQYSTIFIILSAITMMSIS----------GIDNLDTKISSPDTVLNESSLQEQFSSSVG- 49
M+ S++F L A ++ G + T S+P + QE
Sbjct: 1 MKRSSVFGFLVAFLFVAGCKHNMDKETVAGDVSAKTVQSAPVSTETAQEKQEPKQEPAPV 60
Query: 50 -------------DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRN 96
S++FD Y I+ +D + L + +++ L+EG+ DE GS
Sbjct: 61 VEEKPAIESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEFGSSE 120
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ ALG++R +V N V +G+ +K S+G+ P + Y +NRR V L
Sbjct: 121 YNQALGVKRTLSVKNALVIKGVEKDMIKTISFGETKPKCTQKTRECYKENRRVDVKL 177
>gi|262373228|ref|ZP_06066507.1| inner membrane lipoprotein yiaD [Acinetobacter junii SH205]
gi|262313253|gb|EEY94338.1| inner membrane lipoprotein yiaD [Acinetobacter junii SH205]
Length = 220
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 60/146 (41%), Gaps = 1/146 (0%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
IL + + + + + V + + S+ FDT+ +I+P
Sbjct: 71 ILGGASGLYLDNKEKKLRAQMAGTGVEVGRNPDGSVQLIMPGSITFDTNKSNIKPNFYGT 130
Query: 69 LSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
L+ + L + + L+ G+ D G+ + +I L RA +V NY ++G+S+SR+
Sbjct: 131 LNKVAQTLAEDNKSAILVTGYTDNTGNDSINIPLSQARAQSVKNYLASQGVSSSRIDAQG 190
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFL 153
G P +NRR + +
Sbjct: 191 LGSSNPIASNATAAGKEQNRRVEISI 216
>gi|192290369|ref|YP_001990974.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1]
gi|192284118|gb|ACF00499.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1]
Length = 441
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 51/133 (38%), Gaps = 1/133 (0%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-C 81
+ + + + + + F+ S I A +L L + +++
Sbjct: 309 KTANATGALPVSPAQDCQGRVSALASAEKINFERRSAVIDKASQPLLDKLAAAIKQCPAV 368
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
+ G+ D G +++++AL RRA AV GI + ++ YG P +
Sbjct: 369 TIEVAGYTDGAGKKSANVALSKRRAEAVVASLTKVGIGSVKLVAEGYGSAKPIAANDTAE 428
Query: 142 AYAKNRRAIVFLK 154
A+NRR +K
Sbjct: 429 GRAQNRRIEFVVK 441
>gi|84385674|ref|ZP_00988705.1| Conserved hypothetical outer membrane protein [Vibrio splendidus
12B01]
gi|84379654|gb|EAP96506.1| Conserved hypothetical outer membrane protein [Vibrio splendidus
12B01]
Length = 212
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 57/129 (44%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF 83
D + ++ + Q + + F +++ P + LS L L+ +
Sbjct: 73 ADQSNLGMNQSGCKTWISNQERHGLLARLHFGFDQHNLSPMGSKALSQLAGELKTNGSAI 132
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
++GH D G + ALGL+RA + VA G+ +R+ + S+G+ P +
Sbjct: 133 TVDGHTDSTGEAGYNQALGLQRALTTSDGLVADGVEKNRLVIRSFGESKPIASNATAEGR 192
Query: 144 AKNRRAIVF 152
AKNRR+ ++
Sbjct: 193 AKNRRSEIW 201
>gi|311697262|gb|ADQ00134.1| outer membrane protein OprF [marine bacterium HP15]
Length = 374
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 49/142 (34%), Gaps = 6/142 (4%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
+G D L E S + F S SI + + + +
Sbjct: 237 CAGTDAARVAEVDSVGCLGEVKTLRTEVVS----ITFPLDSASIPAEFDSEIDRIAALIL 292
Query: 78 KHDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSV 135
++ + I GHAD G + L RRA +V + ++R A R+K YG+ P
Sbjct: 293 ENTGTVIEIAGHADASGDSVYNQRLSQRRAESVASALISRNATIADRIKAVGYGETQPIA 352
Query: 136 YGHDEDAYAKNRRAIVFLKGCR 157
NRR ++ R
Sbjct: 353 TNETAQGREMNRRVEARVQVLR 374
>gi|289761034|ref|ZP_06520412.1| outer membrane protein A ompA [Mycobacterium tuberculosis GM 1503]
gi|289708540|gb|EFD72556.1| outer membrane protein A ompA [Mycobacterium tuberculosis GM 1503]
Length = 232
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 1/140 (0%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
M ++ I+ P + LQ ++ G + F S+ PAD ++L+ +
Sbjct: 92 MKIVNNIEVTGQAPPGPPASGPCADLQSAINAVTGGPIAFGNDGASLIPADYEILNRVAD 151
Query: 75 WLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
L+ I G+ D GS +I L +RA V +Y VARG++ + G P
Sbjct: 152 KLKACPDARVTINGYTDNTGSEGINIPLSAQRAKIVADYLVARGVAGDHIATVGLGSVNP 211
Query: 134 SVYGHDEDAYAKNRRAIVFL 153
+ AKNRR + +
Sbjct: 212 IASNATPEGRAKNRRVEIVV 231
>gi|239815674|ref|YP_002944584.1| peptidoglycan-associated lipoprotein [Variovorax paradoxus S110]
gi|239802251|gb|ACS19318.1| peptidoglycan-associated lipoprotein [Variovorax paradoxus S110]
Length = 172
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 17/168 (10%)
Query: 1 MQYSTIFIILSAITMMSISG---------IDNLDTKISSPDTVLNESSLQ-------EQF 44
M TI+ + + S D T + + + Q
Sbjct: 1 MLKRTIYSLAIVALIAGCSSGTKLNDTPVTDRSGTAGGQQGSASAVAPVTIDPNAGTAQG 60
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGL 103
+ V+FD SY+++P ++ +L+ IEGH D+ G R ++ALG
Sbjct: 61 PVGIERIVYFDYDSYTVKPEFQSLIDGHARFLKANPQRRVSIEGHTDDRGGREYNLALGQ 120
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+R+ AV G+S ++++ S+GKE P+V G E+A+A+NRRA +
Sbjct: 121 KRSEAVRRALTLLGVSDAQIEAVSFGKEKPAVQGSGEEAWAQNRRAEI 168
>gi|82776019|ref|YP_402366.1| peptidoglycan-associated outer membrane lipoprotein [Shigella
dysenteriae Sd197]
gi|309786420|ref|ZP_07681046.1| peptidoglycan-associated lipoprotein [Shigella dysenteriae 1617]
gi|81240167|gb|ABB60877.1| peptidoglycan-associated lipoprotein [Shigella dysenteriae Sd197]
gi|308925814|gb|EFP71295.1| peptidoglycan-associated lipoprotein [Shigella dysenteriae 1617]
Length = 173
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 54/172 (31%), Positives = 82/172 (47%), Gaps = 20/172 (11%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNL---------------DTKISSPDTVLNESSLQ 41
MQ + + I L + + + S N D + + E +
Sbjct: 1 MQLNKVLKGLMIALPVMAIAACSSNKNASNDGSEGMLGAGTGMDASGGNGNMSSEEQARL 60
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIA 100
+ + V+FD Y IR Q+L ++L + +EGHADE G+ +I+
Sbjct: 61 QMQQLQQNNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADERGTPEYNIS 120
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
LG RRA AV Y +G+SA ++ + SYGKE P+V GHDE AY+KNRRA++
Sbjct: 121 LGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYSKNRRAVLV 172
>gi|330448107|ref|ZP_08311755.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328492298|dbj|GAA06252.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 348
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 47/130 (36%), Gaps = 4/130 (3%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDS---VFFDTSSYSIRPADIQVLSNLGSW-LEKHDC 81
TK + + V+N + QE + ++ + + + + + D Q L +
Sbjct: 194 TKPAVVEPVVNTAPPQEAKTITIEPATVSIAYGVNGNHLTAEDQQKLQPMMQRLTRYPSA 253
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
+ G+ GS + L +RA V + + +++ G+ P +
Sbjct: 254 TVEVTGYTSNTGSAAYNQKLSEKRAKNVAHLLSQYVANPNQITAKGMGEATPVASNDTAE 313
Query: 142 AYAKNRRAIV 151
A NRR V
Sbjct: 314 GRAANRRVEV 323
>gi|302189107|ref|ZP_07265780.1| OmpA/MotB [Pseudomonas syringae pv. syringae 642]
Length = 229
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 1/125 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHA 89
+T + +Q + ++ F T S +I + L+NL S + + + I G+
Sbjct: 98 ANTGVEVQRQGDQIKLIMPGNITFATDSSAIASSFYSPLNNLASSLKQFNQNNIEIVGYT 157
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GSR ++ L +RA +V Y ++G+ S + V G + P D + A+NRR
Sbjct: 158 DSTGSRQHNMDLSQQRAQSVATYLTSQGVDQSHLSVRGAGPDQPIASNADVNGRAQNRRV 217
Query: 150 IVFLK 154
V LK
Sbjct: 218 EVNLK 222
>gi|253701833|ref|YP_003023022.1| OmpA/MotB domain protein [Geobacter sp. M21]
gi|251776683|gb|ACT19264.1| OmpA/MotB domain protein [Geobacter sp. M21]
Length = 228
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 52/132 (39%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
D + ++ ++ + FD ++P LS + L+
Sbjct: 83 DRQAVALKKSMPEAEVVRDGDKVYVALPSGILFDVGKDVLKPDAKDSLSRAAATLKDSQT 142
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
IEGH D GS + L RRA V +Y V++G+ ++M YG P+V +
Sbjct: 143 TITIEGHTDSTGSNAINQPLSERRANRVRDYLVSQGVPGAKMAAIGYGSSRPAVPNDSDA 202
Query: 142 AYAKNRRAIVFL 153
A NRR + L
Sbjct: 203 NRALNRRVQIEL 214
>gi|170703595|ref|ZP_02894341.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria
IOP40-10]
gi|172063336|ref|YP_001810987.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria
MC40-6]
gi|170131500|gb|EDT00082.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria
IOP40-10]
gi|171995853|gb|ACB66771.1| peptidoglycan-associated lipoprotein [Burkholderia ambifaria
MC40-6]
Length = 163
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 1/132 (0%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CD 82
T S + L S SV+FD YS++P +L + +L H
Sbjct: 32 APTPSSEAVATVTTDDLNNPNSPLAKRSVYFDFDQYSVKPEYQSLLQSHADYLRNHPSRR 91
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
LI+G+ DE G+ ++ALG RR+ AV + G+ A++++ S GKE P GHDED+
Sbjct: 92 VLIQGNTDERGTSEYNLALGQRRSQAVMSALETLGVQATQLEAVSLGKEKPVALGHDEDS 151
Query: 143 YAKNRRAIVFLK 154
+A+NRRA + +
Sbjct: 152 WAQNRRADLVYR 163
>gi|108760432|ref|YP_632749.1| peptidoglycan-associated lipoprotein (Pal) family protein
[Myxococcus xanthus DK 1622]
gi|108464312|gb|ABF89497.1| peptidoglycan-associated lipoprotein (Pal) family protein
[Myxococcus xanthus DK 1622]
Length = 171
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 18/171 (10%)
Query: 1 MQYSTIFIILSAITMMSISGIDN----------------LDTKISSPDTVLNESSLQEQF 44
M T+ +++A++++ + S+ + +E + +
Sbjct: 1 MN-RTLLSLIAAVSLVGCASKQKPSSLTDNLPDQHRSPTATAATSTRNADEDEEAARRAM 59
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGL 103
S D V+F+ S ++RP +L+ L + L + + GH ELG+ +IALG
Sbjct: 60 GSLSADPVYFELDSATLRPESRDMLAQLATGLRERPLTRVTVSGHTCELGTTEYNIALGH 119
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RRA V +Y G+ +S++ + S+G+E P H EDA +NRRA
Sbjct: 120 RRAAVVRDYLRNLGVESSQLSIVSFGEERPLSDAHTEDALRRNRRAEFTFS 170
>gi|320325748|gb|EFW81809.1| ompA family protein [Pseudomonas syringae pv. glycinea str. B076]
gi|320327336|gb|EFW83350.1| ompA family protein [Pseudomonas syringae pv. glycinea str. race 4]
gi|330881603|gb|EGH15752.1| ompA family protein [Pseudomonas syringae pv. glycinea str. race 4]
Length = 229
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 1/128 (0%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIE 86
S +T + +Q + ++ F T S +I + L+NL S + + + I
Sbjct: 95 ASMANTGVEVQRQGDQIKLIMPGNITFATDSSAIASSFYSPLNNLASSLKQFNQNNIEIV 154
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
G+ D GSR ++ L +RA +V Y ++G+ S + V G + P D + A+N
Sbjct: 155 GYTDSTGSRQHNMDLSQQRAQSVATYLTSQGVDQSHLSVRGAGPDQPIASNADVNGRAQN 214
Query: 147 RRAIVFLK 154
RR V LK
Sbjct: 215 RRVEVNLK 222
>gi|290509857|ref|ZP_06549228.1| outer membrane protein [Klebsiella sp. 1_1_55]
gi|289779251|gb|EFD87248.1| outer membrane protein [Klebsiella sp. 1_1_55]
Length = 568
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 44/115 (38%), Gaps = 2/115 (1%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSI 99
+ FDT + ++P + L + L + ++ GH D +G ++
Sbjct: 426 VAPDVIRLDSMSLFDTGKWVLKPGSTKRLVSSLMDIKARPGWLIVVAGHTDSVGEEKANQ 485
Query: 100 ALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L L+RA +V ++ G V YG+ P + A NRR + L
Sbjct: 486 LLSLKRAESVRDWMRDTGDVPDSCFAVQGYGESRPIATNDTPEGRALNRRVEISL 540
>gi|161526078|ref|YP_001581090.1| OmpA/MotB domain-containing protein [Burkholderia multivorans ATCC
17616]
gi|189349207|ref|YP_001944835.1| OOP family OmpA-OmpF porin [Burkholderia multivorans ATCC 17616]
gi|160343507|gb|ABX16593.1| OmpA/MotB domain protein [Burkholderia multivorans ATCC 17616]
gi|189333229|dbj|BAG42299.1| OOP family OmpA-OmpF porin [Burkholderia multivorans ATCC 17616]
Length = 316
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++ F+T S ++ P Q+L + + + + I GH D G+R S+IAL RA
Sbjct: 209 NRTIEFETGSATLTPQGKQILDQMAAALAKLQNRTVDIIGHTDNSGNRTSNIALSQARAD 268
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV Y + +GI+ +M T G + P + A+NRR +
Sbjct: 269 AVKGYLITKGIAPQQMTTTGVGPDQPIAPNDTAEGRARNRRIEFRV 314
>gi|107100572|ref|ZP_01364490.1| hypothetical protein PaerPA_01001597 [Pseudomonas aeruginosa PACS2]
gi|313106086|ref|ZP_07792343.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
39016]
gi|310878845|gb|EFQ37439.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
39016]
Length = 158
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/155 (20%), Positives = 57/155 (36%), Gaps = 8/155 (5%)
Query: 7 FIILSAITM-MSISGIDNLDTKI---SSPDTVLNESS---LQEQFSSSVGDSVFFDTSSY 59
+ L+ ++ + ++G + + VL E E + + V F +
Sbjct: 1 MLALALFSLVLGLTGCQTKPPQTGLSAEQIAVLQEQGFELRDEGWEFGMSSKVLFGNNLD 60
Query: 60 SIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI 118
+ P L+ + L D +EGH D G + L RRA +V F G+
Sbjct: 61 RLNPDSRNTLTKIAHALLAVDIDKVRLEGHTDNYGDEGYNQKLSERRAESVAAVFREAGM 120
Query: 119 SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
A+ ++V G P ++NRR + +
Sbjct: 121 PAANIEVRGLGMSKPVADNKTRAGRSENRRVAIIV 155
>gi|148652893|ref|YP_001279986.1| OmpA/MotB domain-containing protein [Psychrobacter sp. PRwf-1]
gi|148571977|gb|ABQ94036.1| OmpA/MotB domain protein [Psychrobacter sp. PRwf-1]
Length = 314
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 4/133 (3%)
Query: 26 TKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF 83
I+ V+ + + ++ V F+T +RP+ + LS + ++ K+
Sbjct: 180 PVITEAAEVVTAAPVAPVLKEKVTIDLEVLFETDKSVVRPSYYRKLSEVADFMNKYPSTI 239
Query: 84 -LIEGHADELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDED 141
IEGH D+ S + ++AL RRA AV N F I ++R+K YG+ P +
Sbjct: 240 ATIEGHTDDRASDSYNLALSQRRADAVRNVFIHEFDIDSNRLKAIGYGESKPRATNDTAE 299
Query: 142 AYAKNRRAIVFLK 154
NRR + ++
Sbjct: 300 GRQLNRRVMAVIE 312
>gi|30314420|gb|AAP15419.1| outer membrane lipoprotein precursor [Burkholderia multivorans]
Length = 149
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/136 (32%), Positives = 72/136 (52%), Gaps = 2/136 (1%)
Query: 19 SGIDNLDTKISSPDTV-LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
+ + T+ S+ + +N L + S S++FD SYS++ +L +L+
Sbjct: 11 ANAGAMSTQPSADNVAQVNVDPLNDPNSPLAKRSIYFDFDSYSVKDEYQPLLQQHAQYLK 70
Query: 78 KHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
H LI+G+ DE G+ ++ALG +RA AV G++ S+M+ S GKE P
Sbjct: 71 SHPQRHVLIQGNTDERGTSEYNLALGQKRAEAVRRALALLGVADSQMEAVSLGKEKPQAT 130
Query: 137 GHDEDAYAKNRRAIVF 152
GHDE ++A+NRRA +
Sbjct: 131 GHDEASWAQNRRADLV 146
>gi|77463800|ref|YP_353304.1| flagellar MotB protein [Rhodobacter sphaeroides 2.4.1]
gi|77388218|gb|ABA79403.1| flagellar MotB protein [Rhodobacter sphaeroides 2.4.1]
Length = 366
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 49/129 (37%), Gaps = 5/129 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
+ ++ + S+G F + S + P V++ + + + GH D
Sbjct: 235 AEGLVKVEQTDGKVFVSLGAGGSFPSGSDDLTPDARAVMARIAEATRNPERTITVTGHTD 294
Query: 91 ELG----SRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ + +IAL RA +V VA + R+ S G+ P E+ A+
Sbjct: 295 NVPVSGGAFRDNIALAAGRAASVVRELVASGSVDPGRITAVSRGEFDPVADNATEEGRAQ 354
Query: 146 NRRAIVFLK 154
NRR + +
Sbjct: 355 NRRIEIEIS 363
>gi|126462636|ref|YP_001043750.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
17029]
gi|126104300|gb|ABN76978.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17029]
Length = 366
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 49/129 (37%), Gaps = 5/129 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
+ ++ + S+G F + S + P V++ + + + GH D
Sbjct: 235 AEGLVKVEQTDGKVFVSLGAGGSFPSGSDDLTPDARAVMARIAEATRNPERTITVTGHTD 294
Query: 91 ELG----SRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ + +IAL RA +V VA + R+ S G+ P E+ A+
Sbjct: 295 NVPVSGGAFRDNIALAAGRAASVVRELVASGSVDPGRITAVSRGEFDPVADNATEEGRAQ 354
Query: 146 NRRAIVFLK 154
NRR + +
Sbjct: 355 NRRIEIEIS 363
>gi|319787078|ref|YP_004146553.1| OmpA/MotB domain protein [Pseudoxanthomonas suwonensis 11-1]
gi|317465590|gb|ADV27322.1| OmpA/MotB domain protein [Pseudoxanthomonas suwonensis 11-1]
Length = 323
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 4/114 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ + FDT S S+ + QVLS L L +EG+ D+ S+
Sbjct: 161 LEVEINSDILFDTGSASLDASARQVLSRLADVLRDTPNPVRVEGYTDDRPINTVQFPSNW 220
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V + F A G++ R+ + YG+ P E+ +NRR ++ +
Sbjct: 221 ELSAARAASVVHLFSANGVAPERLAMVGYGEHRPRADNLTEEGRNRNRRVVLIV 274
>gi|291451540|ref|ZP_06590930.1| secreted protein [Streptomyces albus J1074]
gi|291354489|gb|EFE81391.1| secreted protein [Streptomyces albus J1074]
Length = 220
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 37/128 (28%), Gaps = 1/128 (0%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DF 83
+ + ++ V F S + P + + +
Sbjct: 73 KSVVEDLGGEERREDTNTDVKFALQAEVLFGKDSAKLNPEARGRIQAIAEEAQAQQANKV 132
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
+ G D+LGS L RA AV V +V Y ++ P E
Sbjct: 133 RVFGFTDDLGSYEHGKKLSKNRADAVHEELVKTLGPNVTYEVRGYSEDYPIADNSTEAGR 192
Query: 144 AKNRRAIV 151
KNRR V
Sbjct: 193 MKNRRVEV 200
>gi|156936614|ref|YP_001440528.1| hypothetical protein ESA_pESA3p05495 [Cronobacter sakazakii ATCC
BAA-894]
gi|156534868|gb|ABU79692.1| hypothetical protein ESA_pESA3p05495 [Cronobacter sakazakii ATCC
BAA-894]
Length = 567
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 55/132 (41%), Gaps = 2/132 (1%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCD 82
D +N++ + E + + FDT + ++ +VL N L +
Sbjct: 411 SDWSAPVSSPPVNKNIITEPQTIRLDALSLFDTGQWRLKTGSTKVLVNALVGIKARPGWL 470
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDED 141
++ GH D++G ++ L L+RA AV ++ G V YG+ P+V +
Sbjct: 471 IVVAGHTDDVGDERANQQLSLKRAEAVRDWMRGTGDVPESCFAVQGYGESRPAVPNTTAE 530
Query: 142 AYAKNRRAIVFL 153
A NRR + L
Sbjct: 531 GRALNRRVEISL 542
>gi|52842260|ref|YP_096059.1| peptidoglycan-associated lipoprotein precursor (19 kDa surface
antigen) (PPL) [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|54294942|ref|YP_127357.1| peptidoglycan-associated lipoprotein precursor (19 kDa surface
antigen) (PPL) [Legionella pneumophila str. Lens]
gi|54297971|ref|YP_124340.1| peptidoglycan-associated lipoprotein precursor (19 kDa surface
antigen) (PPL) [Legionella pneumophila str. Paris]
gi|148359617|ref|YP_001250824.1| peptidoglycan-associated lipoprotein [Legionella pneumophila str.
Corby]
gi|296107659|ref|YP_003619360.1| Peptidoglycan-associated lipoprotein precursor [Legionella
pneumophila 2300/99 Alcoy]
gi|129597|sp|P26493|PAL_LEGPN RecName: Full=Peptidoglycan-associated lipoprotein; AltName:
Full=19 kDa surface antigen; AltName: Full=PPL; Flags:
Precursor
gi|44129|emb|CAA43033.1| lipoprotein antigen [Legionella pneumophila]
gi|52629371|gb|AAU28112.1| peptidoglycan associated lipoprotein [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|53751756|emb|CAH13178.1| Peptidoglycan-associated lipoprotein precursor (19 kDa surface
antigen) (PPL) [Legionella pneumophila str. Paris]
gi|53754774|emb|CAH16261.1| Peptidoglycan-associated lipoprotein precursor (19 kDa surface
antigen) (PPL) [Legionella pneumophila str. Lens]
gi|148281390|gb|ABQ55478.1| Peptidoglycan-associated lipoprotein precursor (19 kDa surface
antigen) (PPL) [Legionella pneumophila str. Corby]
gi|295649561|gb|ADG25408.1| Peptidoglycan-associated lipoprotein precursor [Legionella
pneumophila 2300/99 Alcoy]
gi|307610774|emb|CBX00386.1| peptidoglycan-associated lipoprotein precursor [Legionella
pneumophila 130b]
Length = 176
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 72/178 (40%), Gaps = 23/178 (12%)
Query: 1 MQ---YSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSV--------- 48
M+ + + +++++ +++ V + + +
Sbjct: 1 MKAGSFYKLGLLVASAVLVAACS--KTPGSADGGAAVGDGDATAQGLGQMTHFAGQEPGE 58
Query: 49 --------GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSI 99
F ++ + ++ +L+ H +I GH DE GSR ++
Sbjct: 59 SYTTQAPHNQLYLFAYDDSTLASKYLPSVNAQAEYLKTHPGARVMIAGHTDERGSREYNV 118
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
ALG RRA V G+S +++V SYGKE P+ YGHDE ++A+NRR + R
Sbjct: 119 ALGERRADTVAEILRMAGVSRQQIRVVSYGKERPANYGHDEASHAQNRRVEFIYEATR 176
>gi|323189288|gb|EFZ74571.1| inner membrane lipoprotein yiaD [Escherichia coli RN587/1]
Length = 219
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD+SS +++ A L+ + L+++ + G+ D
Sbjct: 94 GTGVSVTRSGDNIILNMPNNVTFDSSSATLKLAGANTLTGVAMVLKEYPKTAVNVIGYTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + ++ L +RA +V + + +G+ ASR++ G P + A+NRR
Sbjct: 154 STGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTSEGKAQNRRVE 213
Query: 151 VFLK 154
+ L
Sbjct: 214 ITLS 217
>gi|257126323|ref|YP_003164437.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b]
gi|257050262|gb|ACV39446.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b]
Length = 215
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 58/112 (51%), Gaps = 1/112 (0%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIAL 101
+ + +++ FD +SY ++P L ++ + L+ + ++ GH D G+ + L
Sbjct: 99 EIKLTAPENITFDLNSYVVKPQFRGTLDSVATVLKTYPDSTIIVSGHTDTSGNDAINNPL 158
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ RA +V +Y ++GI++SRM YG +MP E A+NRR + +
Sbjct: 159 SVNRAASVASYLQSQGIASSRMTYRGYGSKMPIASNATEAGRAQNRRVEIAI 210
>gi|254490409|ref|ZP_05103596.1| Thrombospondin type 3 repeat family [Methylophaga thiooxidans
DMS010]
gi|224464375|gb|EEF80637.1| Thrombospondin type 3 repeat family [Methylophaga thiooxydans
DMS010]
Length = 200
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 53/136 (38%), Gaps = 4/136 (2%)
Query: 22 DNLDTKISSPDTVLNESS--LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
D LD +P+ V+ + + V F + +L + L++
Sbjct: 63 DYLDLCPGTPEGVIVDQDGCPLAGENLLSLTGVNFAFDKAVLTEEAKTILEEAVTLLKET 122
Query: 80 D--CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
D + +EGH D +G+ + L RRA +V +Y +RGI + + G+ P
Sbjct: 123 DGIVEVRVEGHTDSIGTEAYNQDLSQRRAQSVVDYLTSRGIDGNNLVPVGLGESSPVASN 182
Query: 138 HDEDAYAKNRRAIVFL 153
+ A NRR +
Sbjct: 183 DSKAGRAANRRVDFVV 198
>gi|170738630|ref|YP_001767285.1| peptidoglycan-associated lipoprotein [Methylobacterium sp. 4-46]
gi|168192904|gb|ACA14851.1| peptidoglycan-associated lipoprotein [Methylobacterium sp. 4-46]
Length = 168
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 51/143 (35%), Positives = 71/143 (49%), Gaps = 1/143 (0%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-L 76
S +L + + F +VGD VFF+T S + L W
Sbjct: 26 CSSNKDLADASAYAAGGAATPGSAQDFVVNVGDRVFFETDSTDLTATATATLDKQAQWLS 85
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
FLIEGHADE G+R + +LG RR+ AV +Y +RGI+ASRM+ SYGKE P
Sbjct: 86 RYPRYTFLIEGHADERGTREYNFSLGARRSQAVRDYLTSRGIAASRMRTVSYGKERPVAV 145
Query: 137 GHDEDAYAKNRRAIVFLKGCRAN 159
+D +++NRRA+ L G +
Sbjct: 146 CNDISCWSQNRRAVTVLDGGAGS 168
>gi|146298460|ref|YP_001193051.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
UW101]
gi|146152878|gb|ABQ03732.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
Length = 487
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/146 (22%), Positives = 54/146 (36%), Gaps = 11/146 (7%)
Query: 22 DNLDTKISSPDTVLN------ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
D D + P N S E +++F++ + + D + + L +
Sbjct: 338 DKDDDCPTVPGPASNRGCPEVSSQALEDLKVQ-ARAIYFNSGKATFKTGDKETPARLDAI 396
Query: 76 L----EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
+ F IEGH D GS + L RA AV N V RG++ ++ +G
Sbjct: 397 KEILKNYPNAKFSIEGHTDNTGSAKINDKLSQDRANAVLNALVERGVNPENLEAKGFGSS 456
Query: 132 MPSVYGHDEDAYAKNRRAIVFLKGCR 157
P A+NRR + G +
Sbjct: 457 QPVASNKTAAGKAQNRRTEIKHIGSK 482
>gi|307579950|gb|ADN63919.1| outer membrane protein P6 precursor [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 149
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
++ + + V+FD ++ VLS + + ++G+ DE GSR
Sbjct: 29 TAADLDTDACLRQRVVYFDFDKDDVKKEFQTVLSCHAKYLRNRPSAHITLQGNTDERGSR 88
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+IALG RR +V A G S+ ++ V SYG+E P E +++NRR +
Sbjct: 89 EYNIALGERRGNSVLYSLQANGASSGQLNVVSYGEERPVCTESTESCWSRNRRVEIV 145
>gi|196233271|ref|ZP_03132117.1| OmpA/MotB domain protein [Chthoniobacter flavus Ellin428]
gi|196222742|gb|EDY17266.1| OmpA/MotB domain protein [Chthoniobacter flavus Ellin428]
Length = 564
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 17/171 (9%)
Query: 1 MQYSTIFIILS-AITMMSISGID-----NLDTKISSPDTVLNESSLQEQFS--------- 45
M+ +F I + A+ +S +G ++ +N + L ++
Sbjct: 394 MKLIRLFSIAALALATLSFAGCTHGKKGAGAGSGAADGDYVNGTPLPDRQEGVSFLGSNV 453
Query: 46 -SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLR 104
+ V+F SY+I + + + +L+ +I G DE G+ + LG R
Sbjct: 454 DRNKFRPVYFGFDSYAIGGGERSKIDEVAQFLKSASNTIIIAGFTDERGTPEYNRGLGER 513
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV-FLK 154
RA AV + G S+++ S+G EMP+ G +E A+AKNRRA ++
Sbjct: 514 RAQAVREALIRDGADGSKIQTVSFGAEMPADQGSNESAWAKNRRAEFGVVR 564
>gi|153833252|ref|ZP_01985919.1| outer membrane protein [Vibrio harveyi HY01]
gi|148870523|gb|EDL69438.1| outer membrane protein [Vibrio harveyi HY01]
Length = 216
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 50/112 (44%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALG 102
Q S + + F S+ P + L+ L S L + D +EGH D GS + LG
Sbjct: 96 QQSDGLVARLHFGFDQSSLTPMGNKALTQLASSLSEGDSPITVEGHTDSKGSEGYNQELG 155
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L+RA G+ +R+ V S G+ P + A+NRR+ V++
Sbjct: 156 LQRALTTSKVLSTDGVERTRIVVRSLGETQPIASNSTVEGRAQNRRSEVWVS 207
>gi|221639652|ref|YP_002525914.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides KD131]
gi|221160433|gb|ACM01413.1| OmpA/MotB domain protein [Rhodobacter sphaeroides KD131]
Length = 366
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 49/129 (37%), Gaps = 5/129 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
+ ++ + S+G F + S + P V++ + + + GH D
Sbjct: 235 AEGLVKVEQTDGKVFVSLGAGGSFPSGSDDLTPDARAVMARIAEATRNPERTITVTGHTD 294
Query: 91 ELG----SRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ + +IAL RA +V VA + R+ S G+ P E+ A+
Sbjct: 295 NVPVSGGAFRDNIALAAGRAASVVRELVASGSVDPGRITAVSRGEFDPVADNATEEGRAQ 354
Query: 146 NRRAIVFLK 154
NRR + +
Sbjct: 355 NRRIEIEIS 363
>gi|218549686|ref|YP_002383477.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
fergusonii ATCC 35469]
gi|218357227|emb|CAQ89862.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
fergusonii ATCC 35469]
gi|324114316|gb|EGC08285.1| peptidoglycan lipoprotein [Escherichia fergusonii B253]
gi|325498076|gb|EGC95935.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
fergusonii ECD227]
Length = 173
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 54/172 (31%), Positives = 81/172 (47%), Gaps = 20/172 (11%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSP---------------DTVLNESSLQ 41
MQ + + I L + + + S N S + E +
Sbjct: 1 MQLNKVLKGLMIALPVMAIAACSSNKNASNDGSEGMLNGGAGTDINGGNGNMSSEEQARL 60
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIA 100
+ + V+FD Y IR Q+L ++L + +EGHADE G+ +I+
Sbjct: 61 QMQQLQQNNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADERGTPEYNIS 120
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
LG RRA AV Y +G+SA ++ + SYGKE P+V GHDE AY+KNRRA++
Sbjct: 121 LGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYSKNRRAVLV 172
>gi|39934843|ref|NP_947119.1| porin [Rhodopseudomonas palustris CGA009]
gi|39648693|emb|CAE27215.1| OmpA/MotB domain, possible porin [Rhodopseudomonas palustris
CGA009]
Length = 441
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 52/133 (39%), Gaps = 1/133 (0%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-C 81
+ + + + + + + F+ S I A +L L + +++
Sbjct: 309 KTANATGALPSSPAQDCQGRVSALASAEKISFERRSAVIDKASQPLLDKLAAAIKQCPAV 368
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
+ G+ D G ++++IAL RRA AV GI + ++ YG P +
Sbjct: 369 TIEVAGYTDGAGKKSANIALSKRRAEAVVASLTKVGIGSVKLVAEGYGSAKPIAANDTAE 428
Query: 142 AYAKNRRAIVFLK 154
A+NRR +K
Sbjct: 429 GRAQNRRIEFVVK 441
>gi|330721195|gb|EGG99305.1| Flagellar motor rotation protein MotB [gamma proteobacterium
IMCC2047]
Length = 307
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 50/127 (39%), Gaps = 4/127 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
D + S + S+ + F++ S ++ + VL + S L ++ +EG D+
Sbjct: 127 DGEITISGSETWIEISLSSGLLFNSGSANLNRQSLPVLEEISSILSGYENPVHVEGFTDD 186
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+ S+ L R+ AV G+ +R+ YG+ P + KNR
Sbjct: 187 IPIQSGIFPSNWELSAARSAAVVRLLSESGVEPNRLAAVGYGQFQPIASNESAEGRGKNR 246
Query: 148 RAIVFLK 154
R + +
Sbjct: 247 RVALIVS 253
>gi|261380420|ref|ZP_05984993.1| OmpA family protein [Neisseria subflava NJ9703]
gi|284796655|gb|EFC52002.1| OmpA family protein [Neisseria subflava NJ9703]
Length = 411
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 50/124 (40%), Gaps = 5/124 (4%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG- 93
++ Q++ + ++ F++ S I+ VL+ + L+ + ++ G+ D
Sbjct: 266 VSVEDFQDRSTVTILGDGLFESGSAQIQDQYYPVLAAVSQALDSVEGQIIVTGYTDNQPI 325
Query: 94 ---SRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
+ S+ L RA AV + + +R++ G P + AKNRR
Sbjct: 326 QSLNFPSNWHLSQARADAVKEILLNYVKNGGTRIRSEGRGSTDPVAPNDTLENRAKNRRV 385
Query: 150 IVFL 153
+ L
Sbjct: 386 EITL 389
>gi|254511628|ref|ZP_05123695.1| OmpA domain protein [Rhodobacteraceae bacterium KLH11]
gi|221535339|gb|EEE38327.1| OmpA domain protein [Rhodobacteraceae bacterium KLH11]
Length = 634
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 41/118 (34%), Gaps = 1/118 (0%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSR 95
E ++ G + F+ S ++ L + L + I+GH D G
Sbjct: 482 EICEEQIAEVQQGSKIAFEPGSATVVADSRAALDQIADILRECGPIRLEIQGHTDSQGRE 541
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA ++ N R + S YG+ +P ED NRR L
Sbjct: 542 EMNQQLSQARAQSILNELRGRRVPTSSFSAVGYGETLPIADNDTEDGREANRRIEFLL 599
>gi|153841945|ref|ZP_01993455.1| inner membrane lipoprotein YiaD [Vibrio parahaemolyticus AQ3810]
gi|149745429|gb|EDM56680.1| inner membrane lipoprotein YiaD [Vibrio parahaemolyticus AQ3810]
Length = 170
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
V + + Q + + + F +SSY + + L + +E D +I+G+ D
Sbjct: 44 SGVQVQRVGENQLLLRMENGIGFSSSSYQLDASIHNTLRGVARILVEYPDTSLVIDGYTD 103
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + + L RRA +V + V++ ++ R YG+ P + A NRR
Sbjct: 104 STGSESYNQTLSERRAESVRQFLVSQKVAPGRAIARGYGERNPICSNQTSEGRACNRRVE 163
Query: 151 VFL 153
+ +
Sbjct: 164 IQI 166
>gi|194288765|ref|YP_002004672.1| replication/virulence associated protein; outer membrane protein,
ompa family membrane protein [Cupriavidus taiwanensis
LMG 19424]
gi|193222600|emb|CAQ68603.1| replication/virulence associated protein; putative outer membrane
protein, OmpA family membrane protein [Cupriavidus
taiwanensis LMG 19424]
Length = 425
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 46/125 (36%), Gaps = 4/125 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
V++ + + + F + + +L + + + K + GH D +
Sbjct: 299 GVVSVQEDATRSAITFRGDDMFGRGRADVSEKILPLLDKVAAEVSKVTGKVTVIGHTDNV 358
Query: 93 GS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
S+ AL RA V Y ++G++ +R++ G P A+NRR
Sbjct: 359 PIKTAKYPSNQALSEERAATVAEYLASKGVAKNRLEAIGKGDSQPLADNKAPVGRARNRR 418
Query: 149 AIVFL 153
+ +
Sbjct: 419 VEIVV 423
>gi|46201868|ref|ZP_00208284.1| COG2885: Outer membrane protein and related
peptidoglycan-associated (lipo)proteins
[Magnetospirillum magnetotacticum MS-1]
Length = 262
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 47/127 (37%), Gaps = 2/127 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHAD 90
++ S + +FFD+ S I + V+ + + ++ GH D
Sbjct: 4 PQGENGQSEQIARVSFSNQIFFDSDSDRILKSGESVIGAISRLISADQTKPHIMVIGHTD 63
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G ++ L RRA AV V +G+ +++ GK P A+NRR
Sbjct: 64 SSGGDLYNLELSRRRAEAVAAQLVLQGVPHEHIQLVGMGKSQPVASNSTAAGKAQNRRVE 123
Query: 151 VFLKGCR 157
+ R
Sbjct: 124 FLISARR 130
>gi|293605836|ref|ZP_06688207.1| flagellar motor protein MotB [Achromobacter piechaudii ATCC 43553]
gi|292815749|gb|EFF74859.1| flagellar motor protein MotB [Achromobacter piechaudii ATCC 43553]
Length = 361
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 53/148 (35%), Gaps = 4/148 (2%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
+ A + + ++ ++ S + + + F + ++ P+ + V
Sbjct: 143 VTVAEAAPPLKAPSKESLGLGDLAKSVDVIINEQSVSFRISNELLFPSGQATLSPSGLDV 202
Query: 69 LSNLGSWLEKHDCDFLIEGHADELGSRNSS----IALGLRRAYAVFNYFVARGISASRMK 124
+ L L K+ +EGH+D + + L RA +V V G++ R++
Sbjct: 203 IKRLAGILNKNAYQVSVEGHSDPVPIQTRQFASNWELSSSRATSVLRELVHDGVAPERLR 262
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
Y + P A NRR +
Sbjct: 263 AVGYAETRPIETNDTPAGRAANRRVELI 290
>gi|332662636|ref|YP_004445424.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332331450|gb|AEE48551.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 550
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 53/127 (41%), Gaps = 1/127 (0%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEG 87
SS + + + + +V F+T+S + + ++VL + D ++G
Sbjct: 422 SSNNGCPEIKAEDKAVLAFAMSNVNFETNSAKLLASSLEVLDKVAEIMNRYPDFMLYMDG 481
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
H D +G +++ L R A Y +GISA+ ++ +G+ P +NR
Sbjct: 482 HTDNVGEEATNLRLSESRVLACSAYLQTKGISAANIRTQGFGESKPLADNKTAAGRRQNR 541
Query: 148 RAIVFLK 154
R ++
Sbjct: 542 RVEFRVE 548
>gi|66044258|ref|YP_234099.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
gi|63254965|gb|AAY36061.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
gi|330945118|gb|EGH46848.1| OmpA/MotB [Pseudomonas syringae pv. pisi str. 1704B]
gi|330969323|gb|EGH69389.1| OmpA/MotB [Pseudomonas syringae pv. aceris str. M302273PT]
Length = 229
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 1/125 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHA 89
+T + +Q + ++ F T S +I + L+NL S + + + I G+
Sbjct: 98 ANTGVEVQRQGDQIKLIMPGNITFATDSSAIASSFYSPLNNLASSLKQFNQNNIEIVGYT 157
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GSR ++ L +RA +V Y ++G+ + + V G + P D + A+NRR
Sbjct: 158 DSTGSRQHNMDLSQQRAQSVATYLTSQGVDQAHLSVRGAGPDQPIASNADVNGRAQNRRV 217
Query: 150 IVFLK 154
V LK
Sbjct: 218 EVNLK 222
>gi|84503479|ref|ZP_01001534.1| OmpA family protein [Oceanicola batsensis HTCC2597]
gi|84388157|gb|EAQ01110.1| OmpA family protein [Oceanicola batsensis HTCC2597]
Length = 226
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 46/115 (40%), Gaps = 1/115 (0%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSS 98
++ ++ + F T S S+RP L + E + GH D G +
Sbjct: 108 TGDRLVVTMPQDILFATDSASLRPDLTTDLVTVARSLNEYPRTTVQVVGHTDNTGDAAYN 167
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RRA AV N + G+SA R++ G++ P + NRR + +
Sbjct: 168 QQLSARRASAVANVLINSGVSAGRIQSFGRGEDQPRATNLTPEGRQLNRRVDIVI 222
>gi|300870134|ref|YP_003785005.1| OmpA family outer membrane protein [Brachyspira pilosicoli 95/1000]
gi|300687833|gb|ADK30504.1| outer membrane protein, OmpA family [Brachyspira pilosicoli
95/1000]
Length = 401
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 56/125 (44%), Gaps = 4/125 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL--GSWLEKHDCDFLIEGHA 89
+ + ++ E +G+ + FDT SY+++ + N+ D + ++EGH
Sbjct: 277 NDDVVVDTVPEGLVIRLGE-ILFDTDSYTLKEDAKDTVDNIINAIKQTYPDREIIVEGHT 335
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G N + AL +RA V +Y + + ++ +G + P + D KNRR
Sbjct: 336 DNTGEANYNQALSEKRAKTVADYILPKLEH-DKLSYRGFGDKEPIASNDNPDGRQKNRRV 394
Query: 150 IVFLK 154
+ +K
Sbjct: 395 DIIIK 399
>gi|209809406|ref|YP_002264944.1| putative outer membrane protein, OmpA family [Aliivibrio
salmonicida LFI1238]
gi|208010968|emb|CAQ81375.1| putative outer membrane protein, OmpA family [Aliivibrio
salmonicida LFI1238]
Length = 185
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/174 (16%), Positives = 60/174 (34%), Gaps = 21/174 (12%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNE--------------------SSL 40
M+ + +I+ + +T + + +
Sbjct: 1 MKKHLLEVIIVGSLLSGCQSTSEDETTAIKSTPTIESFITYHHDELNAIITDDIGSVAQV 60
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSI 99
++ + FD+ S I+ L+ L K + I GH D GS+ +
Sbjct: 61 NDEIIVLLNGDTSFDSGSIVIKSESKDALTQLAQLLNNKPRSEVFIAGHTDSSGSKQFNT 120
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+L +RA +V +G+ A+R+ +G+ P + + KNRR + +
Sbjct: 121 SLSNKRANSVLALLEQKGVDANRINTYGFGEAEPIASNMNANGRKKNRRIEIRI 174
>gi|171463096|ref|YP_001797209.1| peptidoglycan-associated lipoprotein [Polynucleobacter necessarius
subsp. necessarius STIR1]
gi|171192634|gb|ACB43595.1| peptidoglycan-associated lipoprotein [Polynucleobacter necessarius
subsp. necessarius STIR1]
Length = 166
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/150 (28%), Positives = 74/150 (49%), Gaps = 3/150 (2%)
Query: 6 IFIILSAITMMSISGI--DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRP 63
I +A+ + + S + D+ D S + S SV+F Y+++
Sbjct: 13 ALIGATALLIAACSSVKLDDTDGANGSGSGKFGSQPWNDPSSPLFEKSVYFGFDEYTVQT 72
Query: 64 ADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASR 122
++LS +L+ + +I+G+ADE G+ ++ALG RR+ AV G+S +
Sbjct: 73 KYQKMLSAHAGYLKANPKQKIIIQGNADERGTAEYNLALGQRRSDAVCKSLNLIGVSDDQ 132
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
M+ S+GKE P G +E A+A+NRRA +
Sbjct: 133 MEAVSFGKEKPKAEGDNEAAWAENRRADIV 162
>gi|146309839|ref|YP_001174913.1| putative outer membrane lipoprotein [Enterobacter sp. 638]
gi|145316715|gb|ABP58862.1| OmpA/MotB domain protein [Enterobacter sp. 638]
Length = 220
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 67/135 (49%), Gaps = 1/135 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
+ + T ++ + + ++ +V FD+SS +++PA L+ + L+++
Sbjct: 83 VQEAKLRDKMQGTGVSVTRNGDNIILNMPSNVTFDSSSATLKPAGANTLTGVAMVLKEYS 142
Query: 81 CD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ G+ D GS++ ++ L +RA +V + + +G++A+R++ + G P +
Sbjct: 143 KTAVNVIGYTDSTGSQDLNMRLSQQRADSVASSLITQGVAANRIRTSGMGPANPIASNNT 202
Query: 140 EDAYAKNRRAIVFLK 154
+ A+NRR + L
Sbjct: 203 AEGKAQNRRVEITLS 217
>gi|115350445|ref|YP_772284.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD]
gi|115280433|gb|ABI85950.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
Length = 316
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++ F+T S ++ P Q+L + + + + I GH D G+R S+IAL RA
Sbjct: 209 NRTIEFETGSATLTPQGRQILDQMAAALSKLQNRTVDIIGHTDNSGNRTSNIALSQARAD 268
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV Y + + I +M T G + P D A+NRR +
Sbjct: 269 AVKGYLITKSIPPQQMTTTGVGPDQPIAPNDTADGRARNRRIEFRV 314
>gi|219670208|ref|YP_002460643.1| OmpA/MotB domain protein [Desulfitobacterium hafniense DCB-2]
gi|219540468|gb|ACL22207.1| OmpA/MotB domain protein [Desulfitobacterium hafniense DCB-2]
Length = 275
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 55/132 (41%), Gaps = 5/132 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+T L S + S+ D++ F++ + I P ++L + + L +EGH D
Sbjct: 125 ETKLVSSIEERGLVISIQDTLLFESGAAVITPKAREILDKINNVLASAPNYIKVEGHTDN 184
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
L S+ L + RA V + I A ++ T YG+ P E A+NR
Sbjct: 185 LPINTNRFPSNWELSVLRATNVVHIMQE-IIPAEQLSATGYGEYRPLTSNDTEAGRARNR 243
Query: 148 RAIVFLKGCRAN 159
R + + + +
Sbjct: 244 RVDLVILRSKYD 255
>gi|291616741|ref|YP_003519483.1| Pal [Pantoea ananatis LMG 20103]
gi|291151771|gb|ADD76355.1| Pal [Pantoea ananatis LMG 20103]
Length = 192
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 54/173 (31%), Positives = 82/173 (47%), Gaps = 21/173 (12%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISS----------------PDTVLNESSL 40
MQ + + + L + + + S N + S + +E +
Sbjct: 19 MQLNKVLKGLMLALPIMAVAACSSHKNNNNDQSGAGADGAYGANSGMNGNGNMSSDEQAR 78
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSI 99
+ + V+F Y ++ Q+L ++L + IEGHADE G+ +I
Sbjct: 79 LQMQQLQQNNIVYFGLDKYDVQSDYAQMLDQHANFLRSNPSYKVTIEGHADERGTPEYNI 138
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
ALG RRA AV Y +G+SA +M + SYGKE P+V GHDE AYAKNRRA++
Sbjct: 139 ALGERRANAVKMYLQGKGVSADQMSIVSYGKEKPAVLGHDEAAYAKNRRAVLV 191
>gi|228471770|ref|ZP_04056543.1| OmpA family protein [Capnocytophaga gingivalis ATCC 33624]
gi|228276923|gb|EEK15618.1| OmpA family protein [Capnocytophaga gingivalis ATCC 33624]
Length = 455
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 57/130 (43%), Gaps = 4/130 (3%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSW-LEKHDC 81
+++ P + E+ + ++ FDT +I+ +VL+ + + + +
Sbjct: 322 PEVAGPASNKGCPEPDEKEQKQLNQYAKTILFDTGKATIKFQSAEVLNQIINVLKKYPNS 381
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
F IEGH D G + ++ L RA AV Y + GI A R++ +G E P ++
Sbjct: 382 RFRIEGHTDSTGKKAKNMILSQNRADAVKVYLIQGGIDAGRLESQGFGPEKPIASNKNKK 441
Query: 142 AYAKNRRAIV 151
NRR +
Sbjct: 442 GRELNRRVEI 451
>gi|206579667|ref|YP_002238891.1| OmpA domain protein [Klebsiella pneumoniae 342]
gi|206568725|gb|ACI10501.1| OmpA domain protein [Klebsiella pneumoniae 342]
Length = 567
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 2/103 (1%)
Query: 53 FFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FDT + ++P + L N L + ++ GH D +G ++ L L+RA +V +
Sbjct: 437 LFDTGKWVLKPGSTKRLVNSLMDIKARPGWLIVVAGHTDSVGEEKANQLLSLKRAESVRD 496
Query: 112 YFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ G V YG+ P + A NRR + L
Sbjct: 497 WMRDTGDVPDSCFAVQGYGESRPIATNDTPEGRALNRRVEISL 539
>gi|218778169|ref|YP_002429487.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01]
gi|218759553|gb|ACL02019.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01]
Length = 381
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/151 (19%), Positives = 52/151 (34%), Gaps = 3/151 (1%)
Query: 5 TIFIILSAITMMSISGIDNLDTKISSPD--TVLNESSLQEQFSSSVGDSVFFDTSSYSIR 62
A +++ + D D + + + F T+ I
Sbjct: 226 KAMACFIARSLLKKGPDQDEDGAPDRIDLCPNTPAGASVDDSGCWQLTGLEFKTNKADIA 285
Query: 63 PADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS 121
++ + + D LI GH D G + L RA AV +Y V +G++
Sbjct: 286 KKYYPIMDKAICVLKKYPDLKVLIGGHTDSRGPDKFNQELSQDRAQAVMDYMVKKGVAPE 345
Query: 122 RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
R+ V +G P ++ A+NRR +
Sbjct: 346 RLSVRGFGAAKPIAANDSKEGRAQNRRVTLT 376
>gi|162452025|ref|YP_001614392.1| hypothetical protein sce3752 [Sorangium cellulosum 'So ce 56']
gi|161162607|emb|CAN93912.1| putative membrane protein [Sorangium cellulosum 'So ce 56']
Length = 207
Score = 78.7 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 2/119 (1%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW--LEKHDCDFLIEGHADELGSRNSSI 99
+ S+ V F+T+S + P +VL+ + + + +EGH D G ++
Sbjct: 69 KGNEVSLPGPVVFETNSDKLLPESDEVLNLVDEFLKQREDVSLLRVEGHTDSDGEDAANQ 128
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
L +RA AV + VA+G R +G+ P + + A+NRR F+ +
Sbjct: 129 TLSEKRAMAVARWLVAKGNDCKRFIAVGFGETKPVADNNTPEGKAQNRRTGFFIAAIKG 187
>gi|312796781|ref|YP_004029703.1| peptidoglycan-associated lipoprotein [Burkholderia rhizoxinica HKI
454]
gi|312168556|emb|CBW75559.1| Peptidoglycan-associated lipoprotein [Burkholderia rhizoxinica HKI
454]
Length = 169
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 1/138 (0%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
+ G + +N L S S++FD SY++ +L +
Sbjct: 30 ANAKGGAVSTQPQPTDVQQVNVDELNHPNSPLAKRSIYFDFDSYTVSNEYQPLLQAHAQY 89
Query: 76 LEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
L+ H LI+G+ DE G+ ++ALG +RA +V G++ S+M+ S GKE P+
Sbjct: 90 LKGHPQRHVLIQGNTDERGTSEYNLALGQKRAESVRRTLALLGVNDSQMEAVSLGKEKPA 149
Query: 135 VYGHDEDAYAKNRRAIVF 152
GHDE ++A+NRRA +
Sbjct: 150 ATGHDEASWAQNRRADLV 167
>gi|298485733|ref|ZP_07003812.1| Outer membrane protein [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|298159759|gb|EFI00801.1| Outer membrane protein [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
Length = 229
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 1/128 (0%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIE 86
S +T + +Q + ++ F T S +I + L+NL + + + + I
Sbjct: 95 ASMANTGVEVQRQGDQIKLIMPGNITFATDSSAIASSFYSPLNNLANSLKQFNQNNIEIV 154
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
G+ D GSR ++ L +RA +V Y ++ + S + V G + P D + A+N
Sbjct: 155 GYTDSTGSRQHNMDLSQQRAQSVATYLTSQVVDQSHLSVRGAGPDQPIASNADVNGRAQN 214
Query: 147 RRAIVFLK 154
RR V LK
Sbjct: 215 RRVEVNLK 222
>gi|297380304|gb|ADI35191.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
v225d]
Length = 183
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 42/181 (23%), Positives = 75/181 (41%), Gaps = 28/181 (15%)
Query: 1 MQYSTIFIILSAITMMSIS----------GIDNLDTKISSPDTVLNESSLQEQFSS---- 46
M+ S++F L A ++ G + T S+P + QE
Sbjct: 1 MKRSSVFSFLVAFLFIAGCKHNMDKETVAGDVSAKTVQSAPVSTETVQEKQEPKEEPKQE 60
Query: 47 --------------SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
++ S++FD Y I+ +D + L + +++ L+EG+ DE
Sbjct: 61 PAPVVEEKPAVESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF 120
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
GS + ALG++R +V N + +G+ +K S+G+ P + Y +NRR V
Sbjct: 121 GSSEYNQALGVKRTLSVKNALIIKGVEKDMIKTISFGETKPKCTQKTRECYRENRRVDVK 180
Query: 153 L 153
L
Sbjct: 181 L 181
>gi|110681204|ref|YP_684211.1| OmpA domain-containing protein [Roseobacter denitrificans OCh 114]
gi|109457320|gb|ABG33525.1| OmpA domain protein [Roseobacter denitrificans OCh 114]
Length = 625
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 52/140 (37%), Gaps = 3/140 (2%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSV--GDSVFFDTSSYSIRPADIQVLSNLGS 74
+ +D + P L + E + + G+ + F+ S +I A + + +
Sbjct: 458 AAFDVDVAYVEALDPVAALPTAEECEAKIADIMAGEKINFEPGSATIDAAALTTMDQIAD 517
Query: 75 WLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
L D ++GH D G + +L RA +V N AR + S YG+ P
Sbjct: 518 VLRVCGDLKLEVQGHTDSQGREEMNRSLSQARAQSVLNELRARRVLTSNFIAKGYGESNP 577
Query: 134 SVYGHDEDAYAKNRRAIVFL 153
E+ NRR L
Sbjct: 578 IADNDTEEGREANRRIEFKL 597
>gi|322418609|ref|YP_004197832.1| OmpA/MotB domain-containing protein [Geobacter sp. M18]
gi|320124996|gb|ADW12556.1| OmpA/MotB domain protein [Geobacter sp. M18]
Length = 426
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 53/138 (38%), Gaps = 2/138 (1%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
++ +G ++ + + + + FDT ++I+P L +G
Sbjct: 275 SLTCTGKGGTGAASAAIVVAQPTKAEKRFCNQPAVLMINFDTDKWNIKPRYHAELKTVGD 334
Query: 75 W-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEM 132
+ + D I GH D + + + L RRA AV +Y V I R+ YG++
Sbjct: 335 FLNQFPDAYGEISGHTDSTHTDDYNQRLSERRAKAVRDYIVKNFKIDPKRLTGKGYGEKR 394
Query: 133 PSVYGHDEDAYAKNRRAI 150
P AKNRR
Sbjct: 395 PMATNKTAVGRAKNRRIE 412
>gi|325121713|gb|ADY81236.1| OmpA/MotB domain protein [Acinetobacter calcoaceticus PHEA-2]
Length = 255
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 1/106 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
+ F++ S + A ++L + + I GH D G ++ L RA
Sbjct: 149 NRIIEFESGSAVLTDAGQKILDEMAIALNKVGGKKVKIVGHTDSSGDATKNLKLSQDRAL 208
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV NY +++ I A + G P + KNRR +
Sbjct: 209 AVKNYLISKSIPADHLSTEGLGSSKPVADNTSPEGRKKNRRIEFTV 254
>gi|308188742|ref|YP_003932873.1| OOP family outer membrane lipoprotein yiaD precursor [Pantoea
vagans C9-1]
gi|308059252|gb|ADO11424.1| Putative OOP family outer membrane lipoprotein yiaD precursor
[Pantoea vagans C9-1]
Length = 220
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD+SS +++PA L+ + L+++ + G+ D
Sbjct: 94 GTGVSVTRNGDNIVLNMPNNVTFDSSSSNLKPAGANTLTGVSMVLKEYPKTAVNVVGYTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GSR ++ L +RA +V + + +G+++ R++ G + P E A+NRR
Sbjct: 154 STGSRALNMRLSQQRAESVASALIVQGVASDRLRTQGAGPDNPVATNSTEAGKAQNRRVE 213
Query: 151 VFLK 154
+ L
Sbjct: 214 ITLS 217
>gi|255319440|ref|ZP_05360655.1| peptidoglycan-associated lipoprotein [Acinetobacter radioresistens
SK82]
gi|262379403|ref|ZP_06072559.1| peptidoglycan-associated lipoprotein [Acinetobacter radioresistens
SH164]
gi|255303508|gb|EET82710.1| peptidoglycan-associated lipoprotein [Acinetobacter radioresistens
SK82]
gi|262298860|gb|EEY86773.1| peptidoglycan-associated lipoprotein [Acinetobacter radioresistens
SH164]
Length = 190
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIE 86
+ + + V+FD S + D Q L + + + +
Sbjct: 56 AQNMAGASAKGVTAANRAYLAKRVVYFDYDSSDLSNEDYQTLQAHAQFLMANANSKVALT 115
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
GH DE G+R ++ALG RRA AV +Y V G++ ++++ SYGKEMP GHDE A+ +N
Sbjct: 116 GHTDERGTREYNMALGERRAKAVQSYLVTNGVNPNQLEAVSYGKEMPINPGHDEAAWKEN 175
Query: 147 RRAIV 151
RR +
Sbjct: 176 RRVEI 180
>gi|213964278|ref|ZP_03392508.1| OmpA family protein [Capnocytophaga sputigena Capno]
gi|213953085|gb|EEB64437.1| OmpA family protein [Capnocytophaga sputigena Capno]
Length = 949
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 37/107 (34%), Positives = 62/107 (57%), Gaps = 1/107 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLR 104
+V +V+FD +IR L L ++ + ++ GHAD+ GS + + AL R
Sbjct: 312 KTVKSNVYFDFDKSNIRSDAKNTLDGLLNFLCFNQHLNMVLTGHADDRGSLDYNQALSER 371
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA AV ++F+A G+ +R+K++ G+ P+V G+ E+AY KNRR +
Sbjct: 372 RAQAVKDFFIAGGLDPNRIKISGEGEGNPAVKGNTEEAYQKNRRVEI 418
>gi|115358599|ref|YP_775737.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD]
gi|115283887|gb|ABI89403.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
Length = 163
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 1/132 (0%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CD 82
T S + L S SV+FD YS++P +L + +L H
Sbjct: 32 APTPSSEAVATVTTDDLNNPNSPLAKRSVYFDFDQYSVKPEFQSLLQSHADYLRNHPSRR 91
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
LI+G+ DE G+ ++ALG RR+ AV + G+ A++++ S GKE P GHDED+
Sbjct: 92 VLIQGNTDERGTSEYNLALGQRRSQAVMSALETLGVQATQLEAVSLGKEKPVALGHDEDS 151
Query: 143 YAKNRRAIVFLK 154
+A+NRRA + +
Sbjct: 152 WAQNRRADLVYR 163
>gi|330014716|ref|ZP_08307964.1| OmpA family protein [Klebsiella sp. MS 92-3]
gi|328532776|gb|EGF59559.1| OmpA family protein [Klebsiella sp. MS 92-3]
Length = 568
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 44/115 (38%), Gaps = 2/115 (1%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSI 99
+ FDT + ++P + L + L + ++ GH D +G ++
Sbjct: 426 VAPNVIRLDSMSLFDTGKWVLKPGSTKRLVSSLMDIKARPGWLIVVAGHTDSVGEEKANQ 485
Query: 100 ALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L L+RA +V ++ G V YG+ P + A NRR + L
Sbjct: 486 LLSLKRAESVRDWMRDTGDVPDSCFAVQGYGESRPIATNDTPEGRALNRRVEISL 540
>gi|310659033|ref|YP_003936754.1| motility protein b [Clostridium sticklandii DSM 519]
gi|308825811|emb|CBH21849.1| motility protein B [Clostridium sticklandii]
Length = 216
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 51/133 (38%), Gaps = 8/133 (6%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLI 85
+ + + D++ FD+ S ++P ++++S + L D I
Sbjct: 71 NQLSESVTVLEEEAGLLLRFQDNILFDSGSADLKPESLEIMSYIAQLLNAEDFKDKFISI 130
Query: 86 EGHADELGS----RNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDE 140
EGH D++ S+ L + R+ V + + R+ + Y + P
Sbjct: 131 EGHTDDVPMNSPRYPSNWELSVGRSSNVVRFLVENNNMDPKRISASGYSEYHPVAQNDTA 190
Query: 141 DAYAKNRRAIVFL 153
+ AKNRR + +
Sbjct: 191 ENRAKNRRVDILI 203
>gi|299770678|ref|YP_003732704.1| OmpA/MotB domain protein [Acinetobacter sp. DR1]
gi|298700766|gb|ADI91331.1| OmpA/MotB domain protein [Acinetobacter sp. DR1]
Length = 255
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 1/106 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
+ F++ S + A ++L + + I GH D G ++ L RA
Sbjct: 149 NRIIEFESGSAVLTDAGQKILDEMAVALNKVGGKKVKIVGHTDSSGDATKNLKLSQDRAL 208
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV NY +++ I A + G P + KNRR +
Sbjct: 209 AVKNYLISKSIPADHLSAEGLGSSKPVADNTSPEGRKKNRRIEFTV 254
>gi|262065804|ref|ZP_06025416.1| outer membrane protein [Fusobacterium periodonticum ATCC 33693]
gi|291380509|gb|EFE88027.1| outer membrane protein [Fusobacterium periodonticum ATCC 33693]
Length = 171
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/152 (22%), Positives = 68/152 (44%), Gaps = 7/152 (4%)
Query: 9 ILSAITMMSISGIDNLDTKISSPD------TVLNESSLQEQFSSSVGDSVFFDTSSYSIR 62
+ S T+ +++ + I + N + +E ++ FD ++
Sbjct: 17 VFSLPTLAALTTTQMRENTIRINALEIKNIDITNIEAPKEMTIVLDERALNFDFDKSVVK 76
Query: 63 PADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASR 122
P ++L+NL ++E+++ + +EGH D +GS +I L RRA AV + G++ R
Sbjct: 77 PQYFEMLNNLKDFIEQNNYEVTLEGHTDSIGSNQYNIGLSRRRAEAVKAKLIEFGLAEER 136
Query: 123 MK-VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ + + G+E P + +NRR L
Sbjct: 137 IVGIEAKGEEYPVATNETPEGRLQNRRVEFRL 168
>gi|238024505|ref|YP_002908737.1| outer membrane protein [Burkholderia glumae BGR1]
gi|237879170|gb|ACR31502.1| Outer membrane protein [Burkholderia glumae BGR1]
Length = 602
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 44/111 (39%), Gaps = 2/111 (1%)
Query: 45 SSSVGDSVFFDTSSYSIRPAD-IQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGL 103
++ FD+ ++P ++ L D L+ G+ D G+ N ++ L
Sbjct: 481 VVTLDSMSLFDSGRSQLKPGSTRAMVGALEMIKAHPDKRILVAGYTDNSGNPNRNLKLST 540
Query: 104 RRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA AV ++ + + + + YG P + A+NRR + L
Sbjct: 541 ARARAVRDWLIEASGIPTTQFAIQGYGDTRPIASNDTPEGRARNRRVEITL 591
>gi|206603127|gb|EDZ39607.1| Putative flagellar motor protein (OmpA/MotB) [Leptospirillum sp.
Group II '5-way CG']
Length = 261
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 46/135 (34%), Gaps = 5/135 (3%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI 85
+ SS + +E + F + +R + VL + + L + + + +
Sbjct: 95 VQKSSEKGDMKVVQTKEGIVLRIQSRFLFASGHARVRRKAVPVLRKIAALLARTNHEIRV 154
Query: 86 EGHADELGS----RNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDE 140
G+ D S+ AL RA V + I RM +GK P
Sbjct: 155 HGYTDNQPIRTSRYPSNWALSTMRAVNVLTRLLEYGSIDPGRMGAAGFGKFRPIASNLTP 214
Query: 141 DAYAKNRRAIVFLKG 155
+ KNRR + +
Sbjct: 215 EGREKNRRVEILIMN 229
>gi|114562313|ref|YP_749826.1| OmpA/MotB domain-containing protein [Shewanella frigidimarina NCIMB
400]
gi|114333606|gb|ABI70988.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400]
Length = 225
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHAD 90
T ++ + + ++ + V F + VL+++ +++D + G+ D
Sbjct: 98 STGVSVTRNGDNIVLNMPNEVTFAVDQTVLSSRAKSVLNSVVLVAKEYDDTRLNVIGYTD 157
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + ++ L RA V Y ++ +S SR+ T G+ P E ++NRR
Sbjct: 158 SSGSDSYNLRLSQVRASEVAQYMTSQKVSGSRVSSTGMGESSPIASNSTEQGRSQNRRVE 217
Query: 151 VFL 153
+ L
Sbjct: 218 IVL 220
>gi|172062678|ref|YP_001810329.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6]
gi|171995195|gb|ACB66113.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6]
Length = 587
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 49/124 (39%), Gaps = 2/124 (1%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPAD-IQVLSNLGSWLEKHDCDFLIEGHAD 90
E S ++ FD+ ++R ++ L L+ G+AD
Sbjct: 449 AIASYEPSPPPPAVVTLDSMSLFDSGKATLRTGTTRAMVDALELIKAHSGKRVLVAGYAD 508
Query: 91 ELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
+ G + ++ L + RA AV ++ A GI +R + YG P + AKNRR
Sbjct: 509 DQGRPDRNLKLSIDRASAVRDWLVEASGIPPTRFAIQGYGDTRPVADNATPEGRAKNRRV 568
Query: 150 IVFL 153
+ L
Sbjct: 569 EITL 572
>gi|150398661|ref|YP_001329128.1| OmpA/MotB domain-containing protein [Sinorhizobium medicae WSM419]
gi|150030176|gb|ABR62293.1| OmpA/MotB domain protein [Sinorhizobium medicae WSM419]
Length = 221
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHA 89
T ++ + ++ ++ ++ F T + PA L ++ L K ++GH
Sbjct: 92 QGTGVSVTRAGDRIILNMPSNITFATDRDQVIPAFYSTLDSVAIVLRKFSKTLIDVDGHT 151
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GS + + L RRA +V NY +RG+ RM YG E P E +NRR
Sbjct: 152 DSTGSASYNQGLSERRAASVANYLASRGVDQRRMSAVGYGMERPVASNASEIGRVQNRRV 211
Query: 150 IVFL 153
+ +
Sbjct: 212 EISI 215
>gi|30314414|gb|AAP15416.1| outer membrane lipoprotein precursor [Burkholderia multivorans ATCC
BAA-247]
Length = 149
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 44/136 (32%), Positives = 72/136 (52%), Gaps = 2/136 (1%)
Query: 19 SGIDNLDTKISSPDTV-LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
+ + T+ S+ + +N L + S S++FD SYS++ +L +L+
Sbjct: 11 ANAGAMSTQPSADNVAQVNVDPLNDPNSPLANRSIYFDFDSYSVKDEYQPLLQQHAQYLK 70
Query: 78 KHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
H LI+G+ DE G+ ++ALG +RA AV G++ S+M+ S GKE P
Sbjct: 71 SHPQRHVLIQGNTDERGTSEYNLALGQKRAEAVRRALALLGVADSQMEAVSLGKEKPQAT 130
Query: 137 GHDEDAYAKNRRAIVF 152
GHDE ++A+NRRA +
Sbjct: 131 GHDEASWAQNRRADLV 146
>gi|27904776|ref|NP_777902.1| peptidoglycan-associated lipoprotein precursor [Buchnera aphidicola
str. Bp (Baizongia pistaciae)]
gi|46396115|sp|Q89AJ5|PAL_BUCBP RecName: Full=Peptidoglycan-associated lipoprotein; Flags:
Precursor
gi|27904174|gb|AAO27007.1| peptidoglycan-associated lipoprotein precursor [Buchnera aphidicola
str. Bp (Baizongia pistaciae)]
Length = 173
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/171 (22%), Positives = 83/171 (48%), Gaps = 19/171 (11%)
Query: 1 MQYSTIF----IILSAITMMSIS---------GIDNLDTKISSPDTVLNESSLQEQFSSS 47
M+ IF ++L IT S S +D + ++ + ++ F +
Sbjct: 1 MKSKKIFKILTLLLPMITTFSCSFPKNKLNSNNVDTFYEQETNKSKQQLTNFSEDNFDET 60
Query: 48 V-----GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIAL 101
+ G++++F +++ + + L++L + + +IEGH D G+ ++ L
Sbjct: 61 LEKLKKGNTIYFPFNNHQVNSKYAKNLNDLAQFLCHHSNQKIMIEGHTDSRGTNKYNMYL 120
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
G +RA +V Y ++G+S ++ SYG P +G+ E++Y+KNRR+++
Sbjct: 121 GQKRADSVKLYLESKGVSNQQITTVSYGSSKPVAHGNKENSYSKNRRSVII 171
>gi|120599047|ref|YP_963621.1| OmpA/MotB domain-containing protein [Shewanella sp. W3-18-1]
gi|146292882|ref|YP_001183306.1| OmpA/MotB domain-containing protein [Shewanella putrefaciens CN-32]
gi|120559140|gb|ABM25067.1| OmpA/MotB domain protein [Shewanella sp. W3-18-1]
gi|145564572|gb|ABP75507.1| OmpA/MotB domain protein [Shewanella putrefaciens CN-32]
Length = 288
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-F 83
+ +LN + + ++GD V FDT +++ + Q L+NL ++L K+
Sbjct: 152 SDDAQAQLALLNARESERGWVVTLGD-VLFDTGKANLKSSTSQHLTNLAAFLGKYPQRGA 210
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
+IEG+ D +G+ ++ L RRA +V N+ A+G+ +SR+ G+ P
Sbjct: 211 IIEGYTDSVGTEEYNLGLSERRADSVSNFLQAQGVQSSRLSSQGKGESFPVANNESASGR 270
Query: 144 AKNRRAIVFLKGC 156
+NRR V +
Sbjct: 271 QQNRRVEVIITNA 283
>gi|229588474|ref|YP_002870593.1| hypothetical protein PFLU0931 [Pseudomonas fluorescens SBW25]
gi|229360340|emb|CAY47197.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
Length = 257
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 60/131 (45%), Gaps = 1/131 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
+ S +T + +Q + ++ F T+S +I + Q L+NL + + +
Sbjct: 92 QEKKLRESMANTGVEVQRQGDQIKLIMPGNITFATNSDAISSSFYQPLNNLANSLKQFNQ 151
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
I G+ D GSR ++ L RRA +V NY ++G++ + + G + P D
Sbjct: 152 NTIQIVGYTDSTGSRQLNMDLSQRRAQSVANYLTSQGVNGANLSARGAGPDNPIASNADV 211
Query: 141 DAYAKNRRAIV 151
+ A+NRR V
Sbjct: 212 NGRAQNRRVEV 222
>gi|188590401|ref|YP_001920214.1| chemotaxis protein MotB [Clostridium botulinum E3 str. Alaska E43]
gi|251779316|ref|ZP_04822236.1| chemotaxis protein MotB [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|188500682|gb|ACD53818.1| chemotaxis protein MotB [Clostridium botulinum E3 str. Alaska E43]
gi|243083631|gb|EES49521.1| chemotaxis protein MotB [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 247
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 48/126 (38%), Gaps = 5/126 (3%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSS 98
+ + DSV F++ + P +VL + + + ++EGH D + N
Sbjct: 120 QDERGVILELKDSVLFESGQADLIPGSKEVLDKVDTLVSALPNSVIVEGHTDNVPISNYR 179
Query: 99 IALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
A R V + + + YG+ P VY + E+ AKNRR + +
Sbjct: 180 YASNWELSTQRAVNVVKYFVETKSNDPMKFSAAGYGEYRPIVYNNSEENRAKNRRVNILI 239
Query: 154 KGCRAN 159
+ N
Sbjct: 240 INEKDN 245
>gi|156977399|ref|YP_001448305.1| hypothetical protein VIBHAR_06186 [Vibrio harveyi ATCC BAA-1116]
gi|156528993|gb|ABU74078.1| hypothetical protein VIBHAR_06186 [Vibrio harveyi ATCC BAA-1116]
Length = 216
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 50/112 (44%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALG 102
Q S + + F S+ P + L+ L S L + D +EGH D GS + LG
Sbjct: 96 QQSDGLVARLHFGFDQSSLTPMGNKALTQLASSLSEGDSPITVEGHTDSKGSEGYNQELG 155
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L+RA G+ +R+ V S G+ P + A+NRR+ V++
Sbjct: 156 LQRALTTSKVLSTDGVERTRIVVRSLGETQPIASNSTVEGRAQNRRSEVWVS 207
>gi|27378711|ref|NP_770240.1| hypothetical protein blr3600 [Bradyrhizobium japonicum USDA 110]
gi|27351860|dbj|BAC48865.1| blr3600 [Bradyrhizobium japonicum USDA 110]
Length = 508
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 42/125 (33%), Gaps = 4/125 (3%)
Query: 34 VLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG 93
+ V D F + +I + + + L+K + GH D
Sbjct: 381 AMTADQTPSFIVIRVCDLALFASGQATILDGFKPIALRVAATLDKEPGRIRVVGHTDSSP 440
Query: 94 S----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
++ L + RA AV SR+ V G + P + AKNRR
Sbjct: 441 IRTVRFPTNFELSVERAKAVAAALKPGLTDGSRVDVEGKGADAPIASNTTPEGRAKNRRV 500
Query: 150 IVFLK 154
+F++
Sbjct: 501 EIFIE 505
>gi|261251362|ref|ZP_05943936.1| outer membrane protein A precursor [Vibrio orientalis CIP 102891]
gi|260938235|gb|EEX94223.1| outer membrane protein A precursor [Vibrio orientalis CIP 102891]
Length = 329
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 57/139 (41%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
++ I ++ + + + + + ++ F SS + Q+ + +
Sbjct: 183 LVEIQTDSVIEEPMVTEQHPQSITKSEMFDKVTLSSGPFDSESSELNESSSQQLSQLVAT 242
Query: 75 WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
E + + GH D GS + + AL ++RA V N+ + GI +SR+ + +G+ P
Sbjct: 243 LKEYPEAKVEVVGHTDSTGSSSYNQALSIQRATEVSNFLESEGIDSSRISIDGHGETQPI 302
Query: 135 VYGHDEDAYAKNRRAIVFL 153
A NRR V +
Sbjct: 303 APNSTSQGRANNRRVEVTI 321
>gi|255068383|ref|ZP_05320238.1| OmpA family protein [Neisseria sicca ATCC 29256]
gi|255047376|gb|EET42840.1| OmpA family protein [Neisseria sicca ATCC 29256]
Length = 421
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 49/124 (39%), Gaps = 5/124 (4%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG- 93
++ Q++ + ++ F++ S I+ VL+ + L+ + ++ G+ D
Sbjct: 266 VSVEDFQDRSTVTILGDGLFESGSAQIQDQYYPVLARVSQALDSVEGQIVVTGYTDNQPI 325
Query: 94 ---SRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
+ S+ L RA AV + + R++ G P + AKNRR
Sbjct: 326 QSLNFPSNWHLSQARADAVKEILLNYIKNGGVRIRSEGRGSTDPVAPNDTLENRAKNRRV 385
Query: 150 IVFL 153
+ L
Sbjct: 386 EITL 389
>gi|157963436|ref|YP_001503470.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC
700345]
gi|157848436|gb|ABV88935.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345]
Length = 224
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 53/135 (39%), Gaps = 1/135 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKH 79
+ + + + ++ + + ++ + V F + QVL+++ E
Sbjct: 85 VQEAELRKQLQSSGVSVTRSGDNIILNMPNDVTFGVDQTDLSQRAKQVLNSVVLVALEYD 144
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ + GH D G+ + ++ L RA V NY + + A R+ G+ P
Sbjct: 145 ETKLNVMGHTDSSGAESYNLRLSQVRASEVANYLTRQKVPAQRVASHGMGESKPIASNET 204
Query: 140 EDAYAKNRRAIVFLK 154
+ A+NRR + L
Sbjct: 205 KQGRAENRRVEIILS 219
>gi|110636612|ref|YP_676819.1| peptidoglycan-associated outer membrane protein [Cytophaga
hutchinsonii ATCC 33406]
gi|110279293|gb|ABG57479.1| peptidoglycan-associated outer membrane protein [Cytophaga
hutchinsonii ATCC 33406]
Length = 239
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 1/115 (0%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSS 98
+++ D+V+FD + ++I+P + NL + + I GH D G + +
Sbjct: 122 IRDYARIFTLDNVYFDVNKWNIKPECEPAIDNLYNSLTLNPNMHIEIAGHTDSDGDAHDN 181
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RRA AV N+ + +G+ R++ YG+ P +NRR V +
Sbjct: 182 LVLSQRRAEAVMNHLIQKGLDPKRVQAKGYGEYKPIAPNDSPQNKYRNRRTEVRV 236
>gi|260774918|ref|ZP_05883819.1| outer membrane protein A precursor [Vibrio coralliilyticus ATCC
BAA-450]
gi|260609173|gb|EEX35331.1| outer membrane protein A precursor [Vibrio coralliilyticus ATCC
BAA-450]
Length = 321
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/113 (26%), Positives = 47/113 (41%), Gaps = 1/113 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIA 100
+ F S V SV F S + P L + S++ E + G+ D G +
Sbjct: 200 QTFESEVVYSVSFKFDSAELTPESEMALKEVASFMGEYPQATVDVVGYTDTSGPAVYNQK 259
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L +RA +V + G++ SR+ V G+ P D +NRRA V +
Sbjct: 260 LSEQRAQSVADVIAEYGVNQSRIHVEGAGESNPIATNETRDGRIENRRAEVTV 312
>gi|254428815|ref|ZP_05042522.1| OmpA family protein [Alcanivorax sp. DG881]
gi|196194984|gb|EDX89943.1| OmpA family protein [Alcanivorax sp. DG881]
Length = 356
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 1/106 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYA 108
+++ F+ +S + ++ L L+ + D I GH D GS + L RA A
Sbjct: 249 NNIGFELNSAKLTATSRPLVDRLVKALKSQTNFDVEIAGHTDSTGSAEYNETLSDERAKA 308
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
V Y + G++A R+ YG+ +P A NRR +
Sbjct: 309 VRQYLIDNGVAAERLTARGYGEVVPVASNETSSGRAMNRRVEFRVS 354
>gi|332290107|ref|YP_004420959.1| peptidoglycan-associated outer membrane lipoprotein [Gallibacterium
anatis UMN179]
gi|330433003|gb|AEC18062.1| peptidoglycan-associated outer membrane lipoprotein [Gallibacterium
anatis UMN179]
Length = 150
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 5/134 (3%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
S D + + LQ+++ ++V+F Y I+P Q+L +L
Sbjct: 20 CSSSDKAADQQGKLYGNMTAQELQQRY-----NTVYFGFDKYDIQPEYAQLLDAHAQYLT 74
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+EGH D G+ +IALG RRA AV +Y +G+ ++ SYG+E P+V G
Sbjct: 75 DTSSKVQVEGHTDPRGTPEYNIALGQRRADAVKSYLEGKGVQGGQLSTISYGEEKPAVLG 134
Query: 138 HDEDAYAKNRRAIV 151
H E YAK+RRA++
Sbjct: 135 HTEADYAKDRRAVL 148
>gi|270159822|ref|ZP_06188478.1| peptidoglycan-associated lipoprotein [Legionella longbeachae
D-4968]
gi|289165420|ref|YP_003455558.1| Peptidoglycan-associated lipoprotein precursor (19 kDa surface
antigen) (PPL) [Legionella longbeachae NSW150]
gi|269988161|gb|EEZ94416.1| peptidoglycan-associated lipoprotein [Legionella longbeachae
D-4968]
gi|288858593|emb|CBJ12474.1| Peptidoglycan-associated lipoprotein precursor (19 kDa surface
antigen) (PPL) [Legionella longbeachae NSW150]
Length = 175
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 18/175 (10%)
Query: 1 MQYSTIF-IILSAITMMSISGIDNLDTKISSPDTVLNESSLQ--------------EQFS 45
M+ ++ + L +++ ++ E+S Q E ++
Sbjct: 1 MKARSLCKLGLLVASVILVAACSKAPGSADGAALAEGEASAQGLGQFTHFAGQEPGESYT 60
Query: 46 SSVGDS--VFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALG 102
+ + F ++ P + ++ +L+ H L+ GH DE GSR ++ALG
Sbjct: 61 TQAPHNQLYLFSYDDSNLAPKYLPSVNAQAEYLKTHPGARVLLAGHTDERGSREYNVALG 120
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
RRA V + G++ +++V SYGKE P GHD+ ++A+NRR + R
Sbjct: 121 ERRANTVADILRMAGVNRQQIRVVSYGKERPINLGHDDASHAQNRRVEFTYEATR 175
>gi|296135687|ref|YP_003642929.1| OmpA/MotB domain protein [Thiomonas intermedia K12]
gi|295795809|gb|ADG30599.1| OmpA/MotB domain protein [Thiomonas intermedia K12]
Length = 298
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 43/118 (36%), Gaps = 4/118 (3%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR---- 95
+ D+V F + ++ P +L+ + L+ + G D
Sbjct: 134 TPLGVVIDIHDTVLFASGQAALTPQAQDLLNQIAGVLQGVAYPIQVNGFTDTTPIHTAQF 193
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ AL RA +V F+ +G+ ++ YG+ P A NRR V +
Sbjct: 194 PSNWALSAARAVSVVEMFIEQGVKPEQLVAAGYGQYHPVESNDTAKGRAANRRVSVVI 251
>gi|194469803|ref|ZP_03075787.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|197251258|ref|YP_002145710.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|205358387|ref|ZP_02655691.2| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
gi|238911682|ref|ZP_04655519.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Tennessee str.
CDC07-0191]
gi|194456167|gb|EDX45006.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Kentucky str. CVM29188]
gi|197214961|gb|ACH52358.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Agona str. SL483]
gi|205334829|gb|EDZ21593.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Kentucky str. CDC 191]
Length = 174
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 55/173 (31%), Positives = 81/173 (46%), Gaps = 21/173 (12%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKIS----------------SPDTVLNESSL 40
MQ + + I L + + + S N S S + E +
Sbjct: 1 MQLNKVLKGLMIALPVMAIAACSSNKNASNDGSEGGMLNGAGTGMDSNGSGNMSSEEQAR 60
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSI 99
+ + V+FD Y IR +L ++L + +EGHADE G+ +I
Sbjct: 61 LQMQQLQQNNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADERGTPEYNI 120
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+LG RRA AV Y +G+SA ++ + SYGKE P+V GHDE AYAKNRRA++
Sbjct: 121 SLGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYAKNRRAVLV 173
>gi|78358672|ref|YP_390121.1| peptidoglycan-associated lipoprotein [Desulfovibrio desulfuricans
subsp. desulfuricans str. G20]
gi|78221077|gb|ABB40426.1| peptidoglycan-associated lipoprotein, putative [Desulfovibrio
desulfuricans subsp. desulfuricans str. G20]
Length = 177
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 44/148 (29%), Positives = 78/148 (52%), Gaps = 4/148 (2%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQ---FSSSVGDSVFFDTSSYSIRPADI 66
++A + + + SS + ++E +L + G+ V+F+ + ++
Sbjct: 28 VAATPEKAATETVVVSEDSSSSSSAMSEEALAAYEKAKAVVTGNVVYFEFDKFDLKAEGK 87
Query: 67 QVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
++L L+ LIEG+ DE G++ ++ALG RRA A F Y V G+ ++++
Sbjct: 88 ELLKGKAEALKAYPQLRVLIEGNCDERGTQEYNLALGERRARAAFEYLVLLGVRPDQLEI 147
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
SYG+E P+V G++E A+AKNRRA L
Sbjct: 148 VSYGEERPAVSGNNEAAWAKNRRAEFKL 175
>gi|119773836|ref|YP_926576.1| Outer membrane protein-related peptidoglycan-associated
(lipo)protein [Shewanella amazonensis SB2B]
gi|119766336|gb|ABL98906.1| Outer membrane protein-related peptidoglycan-associated
(lipo)protein [Shewanella amazonensis SB2B]
Length = 481
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 2/114 (1%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIAL 101
Q + D + FD S + P VL L ++L++H F + GH D+ G R + +L
Sbjct: 364 QTGKATLDGLLFDFDSDRMLPESQPVLEVLATYLKQHPAKGFYVVGHTDDKGERAYNQSL 423
Query: 102 GLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
LRRA AV + S++ G+ P +E A NRR + L+
Sbjct: 424 SLRRADAVIQSLTQQYHIPASQLTAHGNGEYSPVASNENESGQALNRRVELVLR 477
>gi|297538999|ref|YP_003674768.1| peptidoglycan-associated lipoprotein [Methylotenera sp. 301]
gi|297258346|gb|ADI30191.1| peptidoglycan-associated lipoprotein [Methylotenera sp. 301]
Length = 180
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 45/181 (24%), Positives = 80/181 (44%), Gaps = 26/181 (14%)
Query: 1 MQYSTIFIILSAITMMSISGI---------------DNLDTKISSPDTVLNESSLQEQFS 45
M+ + ++L+ + + + +G + SP + S+ + +
Sbjct: 1 MKKILVPLLLAGM-ISACAGSHVKEAPSNVAKMPVASPKQAEPESPPPAVTSSAPENKIE 59
Query: 46 SS---------VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSR 95
+ SV+FD Y ++P +L +L H IEG+AD+ GSR
Sbjct: 60 VNPLTDPNNILSKRSVYFDFDKYVVKPEYRTLLEAHAKYLLSHPEKSIRIEGNADDRGSR 119
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
++ALG +RA AV + G+ +++ SYG+E P G DE ++A+NRRA + G
Sbjct: 120 EYNLALGQKRAVAVKSLANLLGVPDKQIETISYGEEKPKATGEDETSWAENRRADIVYSG 179
Query: 156 C 156
Sbjct: 180 E 180
>gi|294782738|ref|ZP_06748064.1| outer membrane protein OprF [Fusobacterium sp. 1_1_41FAA]
gi|294481379|gb|EFG29154.1| outer membrane protein OprF [Fusobacterium sp. 1_1_41FAA]
Length = 127
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 1/122 (0%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ N + +E ++ FD ++P ++L+NL ++E+++ + IEGH D +
Sbjct: 3 DITNIEAPKEMTIVLDERALNFDFDKSVVKPQYFEMLNNLKDFIEQNNYELTIEGHTDSV 62
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIV 151
GS +I L RRA AV + G+ R+ + + G+E P + +NRR
Sbjct: 63 GSNQYNIGLSRRRAEAVKAKLIEFGLPEDRIVGIEAKGEEYPVATNETPEGRLQNRRVEF 122
Query: 152 FL 153
L
Sbjct: 123 RL 124
>gi|188527909|ref|YP_001910596.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
Shi470]
gi|188144149|gb|ACD48566.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
Shi470]
Length = 183
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 37/181 (20%), Positives = 72/181 (39%), Gaps = 28/181 (15%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISS----------------------------PD 32
M+ S++F L A ++ + ++ +
Sbjct: 1 MKRSSVFSFLVAFLFIAGCKHNMDKEAVAGDVSAKAVQSAPVSTETVQEKQEPKEEPKQE 60
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
S ++ S++FD Y I+ +D + L + +++ L+EG+ DE
Sbjct: 61 PAPVVEEKPAVESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEF 120
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
GS + ALG++R +V N + +G+ +K S+G+ P ++ Y +NRR V
Sbjct: 121 GSSEYNQALGVKRTLSVKNALIIKGVEKDMIKTISFGETKPKCTQKTKECYKENRRVDVK 180
Query: 153 L 153
L
Sbjct: 181 L 181
>gi|332527567|ref|ZP_08403614.1| OmpA/MotB domain-containing protein [Rubrivivax benzoatilyticus
JA2]
gi|332111970|gb|EGJ11947.1| OmpA/MotB domain-containing protein [Rubrivivax benzoatilyticus
JA2]
Length = 214
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Query: 58 SYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
++P L +L + + + + +I GH D G + L ++RA AV Y V +
Sbjct: 111 KAILKPEAKAKLDDLAAKAKAVNLEVVIAVGHTDATGPDGYNQKLSVKRADAVKAYLVDQ 170
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
GI +R+ G++ P + AKNRR + + G R
Sbjct: 171 GIEKNRVYTEGKGEKQPVADNKTREGRAKNRRVEIEVVGTR 211
>gi|300772773|ref|ZP_07082643.1| OmpA family outer membrane protein [Sphingobacterium spiritivorum
ATCC 33861]
gi|300761076|gb|EFK57902.1| OmpA family outer membrane protein [Sphingobacterium spiritivorum
ATCC 33861]
Length = 628
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRA 106
V +++FF + Y + P+ L+ L +L+++ I GH D G+ + L RA
Sbjct: 520 VLNNIFFALNKYDLLPSSTSDLNTLVLFLQENPLIRIEIGGHTDNTGNDQLNKTLSDNRA 579
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV +Y +ARGISA+R+ YG P E A NRR +
Sbjct: 580 KAVVSYLIARGISANRLLAKGYGSNQPLATNETETGKALNRRTEFKI 626
>gi|239818112|ref|YP_002947022.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
gi|239804689|gb|ACS21756.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
Length = 219
Score = 78.7 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 55/140 (39%), Gaps = 2/140 (1%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
+ V + + + V FD +I+ VL S
Sbjct: 78 NQKRQMEAATQGTGVAVTQTPNNELKLQIPSDVSFDVGRSNIKSNFAPVLDQFASGLRNN 137
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ + I GH D GS + L + RA + +Y VARG+SA+ ++ G P +
Sbjct: 138 PNAEVRIIGHTDNTGSDAINNPLSVDRAASTRDYLVARGVSAAAFRIEGRGSHEPIANNN 197
Query: 139 DEDAYAKNRRAIVFLKGCRA 158
+ A+NRR +++ G RA
Sbjct: 198 SDAGRAQNRRVEIYV-GERA 216
>gi|288935830|ref|YP_003439889.1| OmpA/MotB domain protein [Klebsiella variicola At-22]
gi|288890539|gb|ADC58857.1| OmpA/MotB domain protein [Klebsiella variicola At-22]
Length = 568
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 2/103 (1%)
Query: 53 FFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FDT + ++P + L + L + ++ GH D +G ++ L L+RA +V +
Sbjct: 438 LFDTGKWVLKPGSTKRLVSSLMDIKARPGWLIVVAGHTDSVGEEKANQLLSLKRAESVRD 497
Query: 112 YFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ G V YG+ P + A NRR + L
Sbjct: 498 WMRDTGDVPDSCFAVQGYGESRPIATNDTPEGRALNRRVEISL 540
>gi|152990958|ref|YP_001356680.1| peptidoglycan-associated lipoprotein [Nitratiruptor sp. SB155-2]
gi|151422819|dbj|BAF70323.1| peptidoglycan-associated lipoprotein [Nitratiruptor sp. SB155-2]
Length = 182
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 3/106 (2%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGLRRAY 107
++FD Y+IRP + + +EG+ DE G+ + ALGL+RA
Sbjct: 75 KIYFDFDKYNIRPDQQPRVEFDAKLFNSDEAKPFNIKVEGNCDEWGTDEYNYALGLKRAK 134
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+V + ARG++ RM + SYG+ P H ++ +AKNRR L
Sbjct: 135 SVRDALAARGVAKDRMTLISYGESNPVCTEHTKECWAKNRRVEFEL 180
>gi|83718191|ref|YP_438455.1| hypothetical protein BTH_II0253 [Burkholderia thailandensis E264]
gi|167614920|ref|ZP_02383555.1| hypothetical protein BthaB_01465 [Burkholderia thailandensis Bt4]
gi|257141504|ref|ZP_05589766.1| hypothetical protein BthaA_20174 [Burkholderia thailandensis E264]
gi|83652016|gb|ABC36080.1| ompA family protein [Burkholderia thailandensis E264]
Length = 437
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 44/132 (33%), Gaps = 4/132 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ +++ ++ + F + S S+ + VL+ + L + +
Sbjct: 291 EPEIAAGLVSVRDEADRSVIVLRGDGLFGSGSTSVIDRYMPVLTRIADALNQVPGSVRVS 350
Query: 87 GHADELGSRN----SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
G+ D+ S+ L RA AV AR R+ G P
Sbjct: 351 GYTDDTPVHTARFASNWDLSRERAEAVRGLIAARLDRPDRITAEGRGTLDPVAPNDSPAN 410
Query: 143 YAKNRRAIVFLK 154
A+NRR + L
Sbjct: 411 RARNRRVEITLM 422
>gi|323138982|ref|ZP_08074042.1| peptidoglycan-associated lipoprotein [Methylocystis sp. ATCC 49242]
gi|322395736|gb|EFX98277.1| peptidoglycan-associated lipoprotein [Methylocystis sp. ATCC 49242]
Length = 179
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 44/127 (34%), Positives = 67/127 (52%), Gaps = 1/127 (0%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADE 91
+ + + F+++VGD +FF+T S + L W F +EGHADE
Sbjct: 53 SGIASPGSAQDFATNVGDRIFFETDSTDLTSTAQATLDKQAEWLNRYGRYSFTVEGHADE 112
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
G+R + ALG RRA NY +++G+S SR++ SYGKE P D +++NRRA+
Sbjct: 113 RGTREYNFALGARRAEVTKNYLISKGVSGSRIRTVSYGKERPVAVCDDISCWSQNRRAVT 172
Query: 152 FLKGCRA 158
L G +
Sbjct: 173 LLAGGNS 179
>gi|53804447|ref|YP_113694.1| OmpA family protein [Methylococcus capsulatus str. Bath]
gi|53758208|gb|AAU92499.1| OmpA family protein [Methylococcus capsulatus str. Bath]
Length = 215
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 63/121 (52%), Gaps = 1/121 (0%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSR 95
+ +L + S ++F S + P + +++ ++L H +EGH DE GS
Sbjct: 95 DPALNDPSSPLYKRVIYFGYDSSEVLPEYVPIVNAHAAYLASHPNVTVTLEGHCDERGSP 154
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+IALG +RA ++ N +G S +M++ S+G+E P+ G E A+AKNRR + G
Sbjct: 155 EYNIALGEQRARSIANTMRFQGASDGQMQIVSFGEEKPADPGSGEAAWAKNRRVEIVYPG 214
Query: 156 C 156
Sbjct: 215 N 215
>gi|289207752|ref|YP_003459818.1| peptidoglycan-associated lipoprotein [Thioalkalivibrio sp. K90mix]
gi|288943383|gb|ADC71082.1| peptidoglycan-associated lipoprotein [Thioalkalivibrio sp. K90mix]
Length = 188
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 1/127 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHAD 90
D + +L + S V+F+ ++ + +L + + +EGH D
Sbjct: 62 DRQFDADALDDPDSPLAERLVYFEFDRDEVQSQYMDMLEAHAAYLSQNSGARLRLEGHTD 121
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
E G+R ++ LG RRA +V G S +++V SYG+EMP + +E+A+AKNRR
Sbjct: 122 ERGTREYNLGLGERRAQSVRRILTLNGASDDQIEVISYGEEMPVAFEQNEEAWAKNRRVE 181
Query: 151 VFLKGCR 157
+ + R
Sbjct: 182 LVYESRR 188
>gi|110635499|ref|YP_675707.1| OmpA/MotB [Mesorhizobium sp. BNC1]
gi|110286483|gb|ABG64542.1| OmpA/MotB [Chelativorans sp. BNC1]
Length = 172
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 45/120 (37%), Positives = 70/120 (58%), Gaps = 1/120 (0%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRN 96
+++F+ ++GD +FFDT S IR L+ W + +EGHADE G+R
Sbjct: 51 PGSKQEFTVAIGDRIFFDTDSSVIRADAQATLARQAQWLNQYPSYSVTVEGHADERGTRE 110
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
++ALG RRA A ++ V+RG++A+R++ SYGKE P D +++NRRA+ L G
Sbjct: 111 YNLALGARRAAAARDFLVSRGVAANRIQTISYGKERPVAVCDDISCWSQNRRAVTVLNGA 170
>gi|56698451|ref|YP_168825.1| OmpA domain-containing protein [Ruegeria pomeroyi DSS-3]
gi|56680188|gb|AAV96854.1| OmpA domain protein [Ruegeria pomeroyi DSS-3]
Length = 637
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 47/138 (34%), Gaps = 4/138 (2%)
Query: 26 TKISSPDTVLNESSLQEQF--SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCD 82
P ++ E D + F+ S +I + + + L+
Sbjct: 469 EAPPEPAETSLDADRCEALLAEVQANDKIAFEPGSATIAASASGTMDRIADLLQSCGPIR 528
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
I+GH D G + L RA +V N AR + + YG+ P ED
Sbjct: 529 LEIQGHTDSQGREEMNQQLSQARAQSVLNELRARRVLTASYAAVGYGESQPIADNGTEDG 588
Query: 143 YAKNRRAIV-FLKGCRAN 159
NRR ++ +A+
Sbjct: 589 REANRRIEFRLIRPEQAD 606
>gi|325274366|ref|ZP_08140461.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51]
gi|324100500|gb|EGB98251.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51]
Length = 163
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 49/141 (34%), Gaps = 6/141 (4%)
Query: 19 SGIDNLDTKISSPDTVLN-----ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+G + K +P+ + + E ++ + V F + S+ ++ +G
Sbjct: 20 TGCQSAPPKGLTPEQIAVLKREGFTPTDEGWAYDLSGKVLFGSDLDSLNSQSQAIVERIG 79
Query: 74 SWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
L ++GH D G + L RRA +V V G+ ++ G
Sbjct: 80 KALLGVGIQRVRVDGHTDSSGKAAYNQELSERRAQSVAKALVGVGMQPQNIQSQGLGSSQ 139
Query: 133 PSVYGHDEDAYAKNRRAIVFL 153
P +NRR + +
Sbjct: 140 PVADNRTSAGRTENRRVSIVV 160
>gi|310818239|ref|YP_003950597.1| OmpA domain-containing protein [Stigmatella aurantiaca DW4/3-1]
gi|309391311|gb|ADO68770.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 565
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 46/114 (40%), Gaps = 2/114 (1%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD--CDFLIEGHADELGSRNSSI 99
+ + + + F T + +L + L+ H L+EGH D S ++
Sbjct: 414 QGNKILILEPINFATDQDILLSESWPILEEVSQMLKTHPEIKRLLVEGHTDSRSSDEYNL 473
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RRA ++ Y G+ + R+ +G+ P +E+ A NRR +
Sbjct: 474 ELSRRRAASIRVYLEESGVESERLCSQGFGRSRPVADNKNEEGMALNRRVEFTV 527
>gi|115378368|ref|ZP_01465532.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1]
gi|115364644|gb|EAU63715.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 494
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 46/114 (40%), Gaps = 2/114 (1%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD--CDFLIEGHADELGSRNSSI 99
+ + + + F T + +L + L+ H L+EGH D S ++
Sbjct: 343 QGNKILILEPINFATDQDILLSESWPILEEVSQMLKTHPEIKRLLVEGHTDSRSSDEYNL 402
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RRA ++ Y G+ + R+ +G+ P +E+ A NRR +
Sbjct: 403 ELSRRRAASIRVYLEESGVESERLCSQGFGRSRPVADNKNEEGMALNRRVEFTV 456
>gi|325123365|gb|ADY82888.1| putative outer membrane protein precursor (OmpA-like)
[Acinetobacter calcoaceticus PHEA-2]
Length = 347
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 56/141 (39%), Gaps = 5/141 (3%)
Query: 20 GIDNLDTKISSPDTVLNESS-LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LE 77
++ P V + L E + + VFFDT+ +I+ ++ + E
Sbjct: 192 AAPVVEVAPVEPTPVAPQPQELTEDLNMEL--RVFFDTNKSNIKDQYKPEIAKVAEKLTE 249
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVY 136
+ IEGH D G R + L L RA +V + V + ASR+ + + P
Sbjct: 250 YPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIAD 309
Query: 137 GHDEDAYAKNRRAIVFLKGCR 157
++ A NRR + G R
Sbjct: 310 NKTKEGRAMNRRVFATITGSR 330
>gi|325290746|ref|YP_004266927.1| OmpA/MotB domain protein [Syntrophobotulus glycolicus DSM 8271]
gi|324966147|gb|ADY56926.1| OmpA/MotB domain protein [Syntrophobotulus glycolicus DSM 8271]
Length = 273
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 58/139 (41%), Gaps = 5/139 (3%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI 85
+K + ++ L S+ + S+ D++ F S I P + +L + S L +
Sbjct: 123 SKANGIESKLISSTEERGLVVSIQDTLLFQPGSAEISPNALDILQKISSVLAASQNYIKV 182
Query: 86 EGHADELGSR----NSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDE 140
EGH L S+ L + RA V + + I++ R+ T YG+ P +
Sbjct: 183 EGHTCTLPIHTSQYRSNWELSVIRATNVVHILAESGQINSKRLSATGYGEFRPIASNDTD 242
Query: 141 DAYAKNRRAIVFLKGCRAN 159
+ KNRR + + + +
Sbjct: 243 EGRIKNRRVDLIILRSKYD 261
>gi|299768851|ref|YP_003730877.1| Outer membrane porin F precursor (Root adhesin) [Acinetobacter sp.
DR1]
gi|298698939|gb|ADI89504.1| Outer membrane porin F precursor (Root adhesin) [Acinetobacter sp.
DR1]
Length = 347
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 56/141 (39%), Gaps = 5/141 (3%)
Query: 20 GIDNLDTKISSPDTVLNESS-LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LE 77
++ P V + L E + + VFFDT+ +I+ ++ + E
Sbjct: 192 AAPVVEVAPVEPTPVAPQPQELTEDLNMEL--RVFFDTNKSNIKDQYKPEIAKVAEKLTE 249
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVY 136
+ IEGH D G R + L L RA +V + V + ASR+ + + P
Sbjct: 250 YPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIAD 309
Query: 137 GHDEDAYAKNRRAIVFLKGCR 157
++ A NRR + G R
Sbjct: 310 NKTKEGRAMNRRVFATITGSR 330
>gi|293611044|ref|ZP_06693343.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292826696|gb|EFF85062.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 357
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 56/141 (39%), Gaps = 5/141 (3%)
Query: 20 GIDNLDTKISSPDTVLNESS-LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LE 77
++ P V + L E + + VFFDT+ +I+ ++ + E
Sbjct: 208 AAPVVEVAPVEPTPVAPQPQELTEDLNMEL--RVFFDTNKSNIKDQYKPEIAKVAEKLTE 265
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVY 136
+ IEGH D G R + L L RA +V + V + ASR+ + + P
Sbjct: 266 YPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIAD 325
Query: 137 GHDEDAYAKNRRAIVFLKGCR 157
++ A NRR + G R
Sbjct: 326 NKTKEGRAMNRRVFATITGSR 346
>gi|2853603|gb|AAC08067.1| MotB [Pseudomonas putida]
Length = 285
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 42/115 (36%), Gaps = 4/115 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ S+ F + ++ + S L+ +EG D L ++
Sbjct: 130 IEIELSSSLLFGSGDAMPSDKAFAIIDKVASILKPFANPVHVEGFTDNLPIRTAQYPTNW 189
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L RA ++ G++ +RM YG+ P + A+NRR ++ +
Sbjct: 190 ELSSARAASIVRLLAMEGVNPARMASVGYGEYQPVAGNDTAEGRARNRRVVLVIS 244
>gi|332666790|ref|YP_004449578.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332335604|gb|AEE52705.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 495
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVF 110
V F T S + L NL +++ + GH D++G ++AL +RA AV
Sbjct: 390 VTFATGSEKLTGVSRYELDNLVEAMKEKKGLKIQLAGHTDDIGEDAQNLALSQKRADAVM 449
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
Y V++G+ ASR+ +G+ P +D A+NRR + G
Sbjct: 450 KYLVSKGVDASRLSAKGFGESQPVAANDSDDNRAQNRRTEFRVVG 494
>gi|293609865|ref|ZP_06692167.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292828317|gb|EFF86680.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 188
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 42/166 (25%), Positives = 74/166 (44%), Gaps = 17/166 (10%)
Query: 3 YSTIFIILSAITMMSISGI-------DNLDTKISSPDTVLNESS---------LQEQFSS 46
+ ++ ++++ + ++T S D LN + + ++
Sbjct: 13 FLSVALVMTGCASRKPAATTTTGTNPSTVNTSGLSEDAALNAQNLAGASSKGVTEANKAA 72
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRR 105
V FD S + D Q L + + + + GH DE G+R ++ALG RR
Sbjct: 73 LAKRVVHFDYDSSDLSTEDYQTLQAHAQFLIANANSKVALTGHTDERGTREYNMALGERR 132
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
A AV +Y + G++ +++ SYGKE P GHDE A+ +NRR +
Sbjct: 133 AKAVQSYLITNGVNPQQLEAVSYGKEAPVNAGHDESAWKENRRVEI 178
>gi|78213752|ref|YP_382531.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins-like [Synechococcus sp. CC9605]
gi|78198211|gb|ABB35976.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins-like [Synechococcus sp. CC9605]
Length = 217
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 47/127 (37%), Gaps = 8/127 (6%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELG 93
+ Q++ + + FD S++P+ L + + D IEGH D G
Sbjct: 87 YTSTKSQDELLIDISSDILFDFDKSSLKPSAFPSLRIASKQITEMARGDVRIEGHTDSKG 146
Query: 94 SRNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYG------HDEDAYAKN 146
+ + +L RA +V + V G + V +G+ P + +N
Sbjct: 147 ADAYNQSLSEARAESVRKWLVENGGLTDINFVVRGFGETKPIEPNETDKGEDNPAGRQRN 206
Query: 147 RRAIVFL 153
RR + +
Sbjct: 207 RRVEIIV 213
>gi|33152784|ref|NP_874137.1| 18K peptidoglycan-associated outer membrane lipoprotein
[Haemophilus ducreyi 35000HP]
gi|1150840|gb|AAC44382.1| 18 kDa outer membrane protein [Haemophilus ducreyi]
gi|33149008|gb|AAP96526.1| 18K peptidoglycan-associated outer membrane lipoprotein
[Haemophilus ducreyi 35000HP]
Length = 157
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFS-------SSVGDSVF 53
M+ ++++A ++ + K + + ++ QF + ++V+
Sbjct: 1 MKKIAKVLMIAAPA-FVLTACSSSSGKTDANANMNGDAMAVNQFGGMTTEDLQTRYNTVY 59
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYF 113
F+ SY++ Q+L ++L + + GHADE G+ +IALG RRA AV NY
Sbjct: 60 FNFDSYAVEGEYRQLLDAHAAYLTSSNSKVTVTGHADERGTPEYNIALGQRRADAVKNYL 119
Query: 114 VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+G+S ++ SYG+E PSV GH E YAKNRRA++
Sbjct: 120 ATKGVS--QVSTVSYGEEKPSVLGHTEADYAKNRRAVL 155
>gi|167564829|ref|ZP_02357745.1| hypothetical protein BoklE_19905 [Burkholderia oklahomensis EO147]
Length = 439
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 43/132 (32%), Gaps = 4/132 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ ++ ++ + F++ S S+ + VL + L K +
Sbjct: 293 EPEIAAGLVTVRDEADRSVIVLRGDGLFESGSTSVIDRYMPVLIRVADALNKVQGSVRVS 352
Query: 87 GHADELGSRN----SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
G+ D+ S+ L RA AV AR R+ G P
Sbjct: 353 GYTDDAPVHTARFASNWDLSRERAEAVRGLIAARLDRPDRITAEGRGTLDPVAPNDSPAN 412
Query: 143 YAKNRRAIVFLK 154
A+NRR + L
Sbjct: 413 RARNRRVEITLM 424
>gi|170734971|ref|YP_001774085.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
MC0-3]
gi|169821009|gb|ACA95590.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3]
Length = 220
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLR 104
S+ +F T S + PA L L + ++H ++G+ D GS + AL R
Sbjct: 110 VSLTGDAYFATDSAVLTPAATAALDTLLNQQADRHFARVEVDGYTDATGSDAHNQALSKR 169
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RA AV Y G+ A +G+ P+ + A+NRR + L+
Sbjct: 170 RADAVAGYLREHGLKADSFAAAGHGEANPAASNDTAEGRARNRRVEISLQ 219
>gi|167644957|ref|YP_001682620.1| OmpA/MotB domain-containing protein [Caulobacter sp. K31]
gi|167347387|gb|ABZ70122.1| OmpA/MotB domain protein [Caulobacter sp. K31]
Length = 190
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--LIEGHADELGSRNSSIALGLRRAY 107
DSV F + + + P Q L++ S L+ + + I+G D G + LG RA
Sbjct: 83 DSVKFPLNRHELSPEAEQRLADFASKLKGDNKNVYLEIQGFTDASGDPQYNETLGSERAE 142
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V + +G+ +RM SYG++ P + D A+NRR ++ +
Sbjct: 143 TVRKFLSKQGVPLNRMATISYGEDDPVAPNDNPDGRAQNRRVVIQV 188
>gi|15800457|ref|NP_286469.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli O157:H7 EDL933]
gi|15830030|ref|NP_308803.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli O157:H7 str. Sakai]
gi|16128716|ref|NP_415269.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli str. K-12 substr. MG1655]
gi|30062096|ref|NP_836267.1| peptidoglycan-associated outer membrane lipoprotein [Shigella
flexneri 2a str. 2457T]
gi|56479690|ref|NP_706493.2| peptidoglycan-associated outer membrane lipoprotein [Shigella
flexneri 2a str. 301]
gi|74311265|ref|YP_309684.1| peptidoglycan-associated outer membrane lipoprotein [Shigella
sonnei Ss046]
gi|82543168|ref|YP_407115.1| peptidoglycan-associated outer membrane lipoprotein [Shigella
boydii Sb227]
gi|89107599|ref|AP_001379.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli str. K-12 substr. W3110]
gi|110804633|ref|YP_688153.1| peptidoglycan-associated outer membrane lipoprotein [Shigella
flexneri 5 str. 8401]
gi|157157682|ref|YP_001461902.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli E24377A]
gi|157160223|ref|YP_001457541.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli HS]
gi|170020914|ref|YP_001725868.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli ATCC 8739]
gi|170080408|ref|YP_001729728.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli str. K-12 substr. DH10B]
gi|170683065|ref|YP_001742852.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli SMS-3-5]
gi|187731438|ref|YP_001879398.1| peptidoglycan-associated outer membrane lipoprotein [Shigella
boydii CDC 3083-94]
gi|188492398|ref|ZP_02999668.1| peptidoglycan-associated lipoprotein [Escherichia coli 53638]
gi|189010018|ref|ZP_02804243.2| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
EC4076]
gi|189402679|ref|ZP_02784049.2| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
EC4401]
gi|189402925|ref|ZP_03006899.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
EC4486]
gi|189404924|ref|ZP_02811914.2| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
EC869]
gi|194430753|ref|ZP_03063168.1| peptidoglycan-associated lipoprotein [Escherichia coli B171]
gi|194440229|ref|ZP_03072261.1| peptidoglycan-associated lipoprotein [Escherichia coli 101-1]
gi|195936736|ref|ZP_03082118.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli O157:H7 str. EC4024]
gi|208815415|ref|ZP_03256594.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
EC4045]
gi|208822195|ref|ZP_03262514.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
EC4042]
gi|209396423|ref|YP_002269375.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
EC4115]
gi|209917992|ref|YP_002292076.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli SE11]
gi|217326423|ref|ZP_03442507.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
TW14588]
gi|218553268|ref|YP_002386181.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli IAI1]
gi|218694165|ref|YP_002401832.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli 55989]
gi|218699113|ref|YP_002406742.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli IAI39]
gi|218704068|ref|YP_002411587.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli UMN026]
gi|238900006|ref|YP_002925802.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli BW2952]
gi|253774288|ref|YP_003037119.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli 'BL21-Gold(DE3)pLysS AG']
gi|254160811|ref|YP_003043919.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli B str. REL606]
gi|254791898|ref|YP_003076735.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli O157:H7 str. TW14359]
gi|256021183|ref|ZP_05435048.1| peptidoglycan-associated outer membrane lipoprotein [Shigella sp.
D9]
gi|256023656|ref|ZP_05437521.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
sp. 4_1_40B]
gi|260842947|ref|YP_003220725.1| peptidoglycan-associated outer membrane lipoprotein Pal
[Escherichia coli O103:H2 str. 12009]
gi|260853976|ref|YP_003227867.1| peptidoglycan-associated outer membrane lipoprotein Pal
[Escherichia coli O26:H11 str. 11368]
gi|260866872|ref|YP_003233274.1| peptidoglycan-associated outer membrane lipoprotein Pal
[Escherichia coli O111:H- str. 11128]
gi|261224452|ref|ZP_05938733.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli O157:H7 str. FRIK2000]
gi|261254556|ref|ZP_05947089.1| peptidoglycan-associated outer membrane lipoprotein Pal
[Escherichia coli O157:H7 str. FRIK966]
gi|291281684|ref|YP_003498502.1| Peptidoglycan-associated lipoprotein precursor [Escherichia coli
O55:H7 str. CB9615]
gi|293403996|ref|ZP_06647990.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli FVEC1412]
gi|293409125|ref|ZP_06652701.1| conserved hypothetical protein [Escherichia coli B354]
gi|293414026|ref|ZP_06656675.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli B185]
gi|293433009|ref|ZP_06661437.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli B088]
gi|297520454|ref|ZP_06938840.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli OP50]
gi|298379776|ref|ZP_06989381.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli FVEC1302]
gi|300816391|ref|ZP_07096613.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 107-1]
gi|300822970|ref|ZP_07103105.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 119-7]
gi|300900748|ref|ZP_07118897.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 198-1]
gi|300907000|ref|ZP_07124669.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 84-1]
gi|300918402|ref|ZP_07135002.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 115-1]
gi|300926145|ref|ZP_07141958.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 182-1]
gi|300929453|ref|ZP_07144921.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 187-1]
gi|300937786|ref|ZP_07152583.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 21-1]
gi|300947178|ref|ZP_07161388.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 116-1]
gi|300957690|ref|ZP_07169879.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 175-1]
gi|301020787|ref|ZP_07184851.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 69-1]
gi|301027077|ref|ZP_07190449.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 196-1]
gi|301305229|ref|ZP_07211327.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 124-1]
gi|301327934|ref|ZP_07221105.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 78-1]
gi|301648046|ref|ZP_07247813.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 146-1]
gi|307137354|ref|ZP_07496710.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli H736]
gi|307314794|ref|ZP_07594388.1| peptidoglycan-associated lipoprotein [Escherichia coli W]
gi|309797456|ref|ZP_07691848.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 145-7]
gi|312970820|ref|ZP_07784999.1| peptidoglycan-associated lipoprotein [Escherichia coli 1827-70]
gi|331662101|ref|ZP_08363024.1| peptidoglycan-associated lipoprotein [Escherichia coli TA143]
gi|331667108|ref|ZP_08367973.1| peptidoglycan-associated lipoprotein [Escherichia coli TA271]
gi|71159616|sp|P0A913|PAL_ECO57 RecName: Full=Peptidoglycan-associated lipoprotein; Flags:
Precursor
gi|71159617|sp|P0A912|PAL_ECOLI RecName: Full=Peptidoglycan-associated lipoprotein; Flags:
Precursor
gi|71159618|sp|P0A914|PAL_SHIFL RecName: Full=Peptidoglycan-associated lipoprotein; Flags:
Precursor
gi|12513674|gb|AAG55077.1|AE005252_13 peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
EDL933]
gi|41360|emb|CAA46673.1| peptidoglycan-associated lipoprotein [Escherichia coli K-12]
gi|42257|emb|CAA28771.1| unnamed protein product [Escherichia coli K-12]
gi|1651333|dbj|BAA35407.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli str. K12 substr. W3110]
gi|1786962|gb|AAC73835.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli str. K-12 substr. MG1655]
gi|13360235|dbj|BAB34199.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
Sakai]
gi|30040340|gb|AAP16073.1| peptidoglycan-associated lipoprotein [Shigella flexneri 2a str.
2457T]
gi|56383241|gb|AAN42200.2| peptidoglycan-associated lipoprotein [Shigella flexneri 2a str.
301]
gi|73854742|gb|AAZ87449.1| peptidoglycan-associated lipoprotein [Shigella sonnei Ss046]
gi|81244579|gb|ABB65287.1| peptidoglycan-associated lipoprotein [Shigella boydii Sb227]
gi|110614181|gb|ABF02848.1| peptidoglycan-associated lipoprotein [Shigella flexneri 5 str.
8401]
gi|157065903|gb|ABV05158.1| peptidoglycan-associated lipoprotein [Escherichia coli HS]
gi|157079712|gb|ABV19420.1| peptidoglycan-associated lipoprotein [Escherichia coli E24377A]
gi|169755842|gb|ACA78541.1| peptidoglycan-associated lipoprotein [Escherichia coli ATCC 8739]
gi|169888243|gb|ACB01950.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli str. K-12 substr. DH10B]
gi|170520783|gb|ACB18961.1| peptidoglycan-associated lipoprotein [Escherichia coli SMS-3-5]
gi|187428430|gb|ACD07704.1| peptidoglycan-associated lipoprotein [Shigella boydii CDC 3083-94]
gi|188487597|gb|EDU62700.1| peptidoglycan-associated lipoprotein [Escherichia coli 53638]
gi|189002834|gb|EDU71820.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
EC4076]
gi|189354292|gb|EDU72711.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
EC4401]
gi|189363387|gb|EDU81806.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
EC4486]
gi|189373170|gb|EDU91586.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
EC869]
gi|194411203|gb|EDX27610.1| peptidoglycan-associated lipoprotein [Escherichia coli B171]
gi|194420838|gb|EDX36893.1| peptidoglycan-associated lipoprotein [Escherichia coli 101-1]
gi|208732063|gb|EDZ80751.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
EC4045]
gi|208737680|gb|EDZ85363.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
EC4042]
gi|209157823|gb|ACI35256.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
EC4115]
gi|209776378|gb|ACI86501.1| peptidoglycan-associated lipoprotein [Escherichia coli]
gi|209776380|gb|ACI86502.1| peptidoglycan-associated lipoprotein [Escherichia coli]
gi|209776382|gb|ACI86503.1| peptidoglycan-associated lipoprotein [Escherichia coli]
gi|209776384|gb|ACI86504.1| peptidoglycan-associated lipoprotein [Escherichia coli]
gi|209776386|gb|ACI86505.1| peptidoglycan-associated lipoprotein [Escherichia coli]
gi|209911251|dbj|BAG76325.1| peptidoglycan-associated lipoprotein [Escherichia coli SE11]
gi|217322644|gb|EEC31068.1| peptidoglycan-associated lipoprotein [Escherichia coli O157:H7 str.
TW14588]
gi|218350897|emb|CAU96595.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli 55989]
gi|218360036|emb|CAQ97583.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli IAI1]
gi|218369099|emb|CAR16853.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli IAI39]
gi|218431165|emb|CAR12041.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli UMN026]
gi|238861988|gb|ACR63986.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli BW2952]
gi|242376503|emb|CAQ31207.1| pal, subunit of The Tol-Pal Cell Envelope Complex, Colicin S4
Transport System and The Colicin A Import System
[Escherichia coli BL21(DE3)]
gi|253325332|gb|ACT29934.1| peptidoglycan-associated lipoprotein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253972712|gb|ACT38383.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli B str. REL606]
gi|253976906|gb|ACT42576.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli BL21(DE3)]
gi|254591298|gb|ACT70659.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli O157:H7 str. TW14359]
gi|257752625|dbj|BAI24127.1| peptidoglycan-associated outer membrane lipoprotein Pal
[Escherichia coli O26:H11 str. 11368]
gi|257758094|dbj|BAI29591.1| peptidoglycan-associated outer membrane lipoprotein Pal
[Escherichia coli O103:H2 str. 12009]
gi|257763228|dbj|BAI34723.1| peptidoglycan-associated outer membrane lipoprotein Pal
[Escherichia coli O111:H- str. 11128]
gi|260450105|gb|ACX40527.1| peptidoglycan-associated lipoprotein [Escherichia coli DH1]
gi|281599943|gb|ADA72927.1| Peptidoglycan-associated lipoprotein precursor [Shigella flexneri
2002017]
gi|284920528|emb|CBG33590.1| peptidoglycan-associated lipoprotein [Escherichia coli 042]
gi|290761557|gb|ADD55518.1| Peptidoglycan-associated lipoprotein precursor [Escherichia coli
O55:H7 str. CB9615]
gi|291323828|gb|EFE63250.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli B088]
gi|291428582|gb|EFF01607.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli FVEC1412]
gi|291434084|gb|EFF07057.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli B185]
gi|291469593|gb|EFF12077.1| conserved hypothetical protein [Escherichia coli B354]
gi|298279474|gb|EFI20982.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli FVEC1302]
gi|299879411|gb|EFI87622.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 196-1]
gi|300315608|gb|EFJ65392.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 175-1]
gi|300355807|gb|EFJ71677.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 198-1]
gi|300398433|gb|EFJ81971.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 69-1]
gi|300401221|gb|EFJ84759.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 84-1]
gi|300414465|gb|EFJ97775.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 115-1]
gi|300417844|gb|EFK01155.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 182-1]
gi|300453164|gb|EFK16784.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 116-1]
gi|300457197|gb|EFK20690.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 21-1]
gi|300462562|gb|EFK26055.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 187-1]
gi|300524511|gb|EFK45580.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 119-7]
gi|300531081|gb|EFK52143.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 107-1]
gi|300839541|gb|EFK67301.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 124-1]
gi|300845577|gb|EFK73337.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 78-1]
gi|301073872|gb|EFK88678.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 146-1]
gi|306905692|gb|EFN36220.1| peptidoglycan-associated lipoprotein [Escherichia coli W]
gi|308118980|gb|EFO56242.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 145-7]
gi|309700963|emb|CBJ00260.1| peptidoglycan-associated lipoprotein [Escherichia coli ETEC H10407]
gi|310336581|gb|EFQ01748.1| peptidoglycan-associated lipoprotein [Escherichia coli 1827-70]
gi|313649616|gb|EFS14040.1| peptidoglycan-associated lipoprotein [Shigella flexneri 2a str.
2457T]
gi|315059984|gb|ADT74311.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli W]
gi|315135398|dbj|BAJ42557.1| peptidoglycan-associated lipoprotein precursor [Escherichia coli
DH1]
gi|315257660|gb|EFU37628.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 85-1]
gi|315614617|gb|EFU95259.1| peptidoglycan-associated lipoprotein [Escherichia coli 3431]
gi|320172956|gb|EFW48184.1| 18K peptidoglycan-associated outer membrane lipoprotein [Shigella
dysenteriae CDC 74-1112]
gi|320179418|gb|EFW54375.1| 18K peptidoglycan-associated outer membrane lipoprotein [Shigella
boydii ATCC 9905]
gi|320183982|gb|EFW58806.1| 18K peptidoglycan-associated outer membrane lipoprotein [Shigella
flexneri CDC 796-83]
gi|320193146|gb|EFW67786.1| 18K peptidoglycan-associated outer membrane lipoprotein
[Escherichia coli O157:H7 str. EC1212]
gi|320198139|gb|EFW72743.1| 18K peptidoglycan-associated outer membrane lipoprotein
[Escherichia coli EC4100B]
gi|320637999|gb|EFX07768.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli O157:H7 str. G5101]
gi|320643395|gb|EFX12575.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli O157:H- str. 493-89]
gi|320648689|gb|EFX17325.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli O157:H- str. H 2687]
gi|320654327|gb|EFX22380.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli O55:H7 str. 3256-97 TW 07815]
gi|320659959|gb|EFX27501.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli O55:H7 str. USDA 5905]
gi|320664785|gb|EFX31923.1| peptidoglycan-associated outer membrane lipoprotein [Escherichia
coli O157:H7 str. LSU-61]
gi|323153743|gb|EFZ39990.1| peptidoglycan-associated lipoprotein [Escherichia coli EPECa14]
gi|323158793|gb|EFZ44806.1| peptidoglycan-associated lipoprotein [Escherichia coli E128010]
gi|323163900|gb|EFZ49710.1| peptidoglycan-associated lipoprotein [Shigella sonnei 53G]
gi|323170862|gb|EFZ56512.1| peptidoglycan-associated lipoprotein [Escherichia coli LT-68]
gi|323180019|gb|EFZ65575.1| peptidoglycan-associated lipoprotein [Escherichia coli 1180]
gi|323185098|gb|EFZ70464.1| peptidoglycan-associated lipoprotein [Escherichia coli 1357]
gi|323379456|gb|ADX51724.1| peptidoglycan-associated lipoprotein [Escherichia coli KO11]
gi|323938280|gb|EGB34538.1| peptidoglycan-associated lipoprotein [Escherichia coli E1520]
gi|323942964|gb|EGB39128.1| peptidoglycan lipoprotein [Escherichia coli E482]
gi|323946993|gb|EGB43007.1| peptidoglycan-associated lipoprotein [Escherichia coli H120]
gi|323963122|gb|EGB58692.1| peptidoglycan lipoprotein [Escherichia coli H489]
gi|323967344|gb|EGB62765.1| peptidoglycan lipoprotein [Escherichia coli M863]
gi|323972028|gb|EGB67248.1| peptidoglycan lipoprotein [Escherichia coli TA007]
gi|323976278|gb|EGB71368.1| peptidoglycan lipoprotein [Escherichia coli TW10509]
gi|324020351|gb|EGB89570.1| peptidoglycan-associated lipoprotein [Escherichia coli MS 117-3]
gi|324116283|gb|EGC10204.1| peptidoglycan lipoprotein [Escherichia coli E1167]
gi|326341510|gb|EGD65300.1| 18K peptidoglycan-associated outer membrane lipoprotein
[Escherichia coli O157:H7 str. 1044]
gi|326345729|gb|EGD69468.1| 18K peptidoglycan-associated outer membrane lipoprotein
[Escherichia coli O157:H7 str. 1125]
gi|327254430|gb|EGE66052.1| peptidoglycan-associated lipoprotein [Escherichia coli STEC_7v]
gi|331060523|gb|EGI32487.1| peptidoglycan-associated lipoprotein [Escherichia coli TA143]
gi|331065464|gb|EGI37357.1| peptidoglycan-associated lipoprotein [Escherichia coli TA271]
gi|332093802|gb|EGI98856.1| peptidoglycan-associated lipoprotein [Shigella boydii 5216-82]
gi|332096454|gb|EGJ01450.1| peptidoglycan-associated lipoprotein [Shigella dysenteriae 155-74]
gi|332097640|gb|EGJ02615.1| peptidoglycan-associated lipoprotein [Shigella boydii 3594-74]
gi|332342078|gb|AEE55412.1| peptidoglycan-associated lipoprotein [Escherichia coli UMNK88]
gi|332760890|gb|EGJ91178.1| peptidoglycan-associated lipoprotein [Shigella flexneri 4343-70]
gi|332761270|gb|EGJ91556.1| peptidoglycan-associated lipoprotein [Shigella flexneri 2747-71]
gi|332763939|gb|EGJ94177.1| peptidoglycan-associated lipoprotein [Shigella flexneri K-671]
gi|332768160|gb|EGJ98345.1| peptidoglycan-associated lipoprotein [Shigella flexneri 2930-71]
gi|333007348|gb|EGK26828.1| peptidoglycan-associated lipoprotein [Shigella flexneri VA-6]
gi|333007878|gb|EGK27354.1| peptidoglycan-associated lipoprotein [Shigella flexneri K-218]
gi|333010140|gb|EGK29575.1| peptidoglycan-associated lipoprotein [Shigella flexneri K-272]
gi|333021092|gb|EGK40349.1| peptidoglycan-associated lipoprotein [Shigella flexneri K-227]
gi|333021585|gb|EGK40835.1| peptidoglycan-associated lipoprotein [Shigella flexneri K-304]
Length = 173
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 54/172 (31%), Positives = 81/172 (47%), Gaps = 20/172 (11%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSP---------------DTVLNESSLQ 41
MQ + + I L + + + S N S + E +
Sbjct: 1 MQLNKVLKGLMIALPVMAIAACSSNKNASNDGSEGMLGAGTGMDANGGNGNMSSEEQARL 60
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIA 100
+ + V+FD Y IR Q+L ++L + +EGHADE G+ +I+
Sbjct: 61 QMQQLQQNNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADERGTPEYNIS 120
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
LG RRA AV Y +G+SA ++ + SYGKE P+V GHDE AY+KNRRA++
Sbjct: 121 LGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYSKNRRAVLV 172
>gi|318079837|ref|ZP_07987169.1| secreted protein [Streptomyces sp. SA3_actF]
Length = 166
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 50/143 (34%), Gaps = 1/143 (0%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVL 69
L+ ++ + + ++ + + ++ V FD +++ P+ +
Sbjct: 18 LADGAQLASAKVLDIKSVVEDLGGEERREDTNTDVKFALQAEVLFDKDKFALDPSGRARI 77
Query: 70 SNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
+G +K + G D LGS L RRA V + +V Y
Sbjct: 78 KAIGEEAKKQRARTVRVFGFTDNLGSYAHGKTLSKRRADIVHDELAQYLGPEVTFEVRGY 137
Query: 129 GKEMPSVYGHDEDAYAKNRRAIV 151
++ P E+ KNRR V
Sbjct: 138 SEDYPIADNTTEEGRRKNRRVEV 160
>gi|311696900|gb|ADP99773.1| flagellar motor protein MotB [marine bacterium HP15]
Length = 307
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/132 (25%), Positives = 53/132 (40%), Gaps = 5/132 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ + D +N S Q + V + F + S + +L ++ +E D IE
Sbjct: 132 EPAIADGRINVSEDQRRIVIRVEEKGSFPSGSAQLTWEFEGLLLDMAEVIEGIPGDLTIE 191
Query: 87 GHADELGS----RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDED 141
GH D + S+ L R+ AV N VAR +R+ VT P V +
Sbjct: 192 GHTDNVPIRTDRFYSNWDLSAARSAAVANVLVARDQVEPTRLSVTGLADTKPRVPNTSAE 251
Query: 142 AYAKNRRAIVFL 153
AKNRR + +
Sbjct: 252 NRAKNRRVEIII 263
>gi|78065362|ref|YP_368131.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383]
gi|77966107|gb|ABB07487.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
Length = 170
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 77/167 (46%), Gaps = 15/167 (8%)
Query: 1 MQYSTIFIILSAITMMSISGIDN--------------LDTKISSPDTVLNESSLQEQFSS 46
M + + L+ + + +++ + + +N L + S
Sbjct: 1 MMSNKARLALAVMMISALAACKSGVKLDDKANNAGAVSTQPSADNVAQVNVDPLNDPNSP 60
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRR 105
S++FD SYS++ ++ +L+ H LI+G+ DE G+ ++ALG +R
Sbjct: 61 LAKRSIYFDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNTDERGTSEYNLALGQKR 120
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
A AV G++ S+M+ S GKE P GHDE ++A+NRRA +
Sbjct: 121 AEAVRRAMALLGVNDSQMEAVSLGKEKPQAAGHDEASWAQNRRADLV 167
>gi|86137204|ref|ZP_01055782.1| OmpA domain protein [Roseobacter sp. MED193]
gi|85826528|gb|EAQ46725.1| OmpA domain protein [Roseobacter sp. MED193]
Length = 329
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 55/143 (38%), Gaps = 2/143 (1%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL 72
+ + + + + L EQ V D V F+T + ++ P I L L
Sbjct: 184 LALAPAETPSAGSPPVQKSNPASDLKDLLEQQGHVVLDGVVFETGAETLSPEAITSLRGL 243
Query: 73 GSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGK 130
++E+ LI GH D +G + +L LRRA V + V+ A R+ + G
Sbjct: 244 AGFMEEQSKAQVLIVGHTDSVGGLEDNTSLSLRRAQMVKDALVSALGVAEGRISIAGAGY 303
Query: 131 EMPSVYGHDEDAYAKNRRAIVFL 153
P KNRR V L
Sbjct: 304 MAPIASNLTAAGREKNRRVEVVL 326
>gi|126697829|ref|YP_001086726.1| chemotaxis protein [Clostridium difficile 630]
gi|255099425|ref|ZP_05328402.1| chemotaxis protein [Clostridium difficile QCD-63q42]
gi|115249266|emb|CAJ67079.1| Flagellar motor rotation protein MotB (Chemotaxis protein MotB)
[Clostridium difficile]
Length = 231
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 47/127 (37%), Gaps = 5/127 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ + DS+ FD+ ++ L+ + ++ +IEGH D
Sbjct: 102 QNSVTVKDDSRGILLELDDSILFDSGISELKVDSKATLNKVYDMIKMMKNKIVIEGHTDN 161
Query: 92 LG----SRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKN 146
+ + S+ L RA +V YFV R+ T G+ P V A+N
Sbjct: 162 VPVKSSTHESNWDLSSSRAVSVVRYFVEEKGMDPRLFSATGCGEYQPLVSNETAKGRAEN 221
Query: 147 RRAIVFL 153
RR + +
Sbjct: 222 RRVNILI 228
>gi|239979676|ref|ZP_04702200.1| secreted protein [Streptomyces albus J1074]
Length = 186
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 37/128 (28%), Gaps = 1/128 (0%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DF 83
+ + ++ V F S + P + + +
Sbjct: 39 KSVVEDLGGEERREDTNTDVKFALQAEVLFGKDSAKLNPEARGRIQAIAEEAQAQQANKV 98
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
+ G D+LGS L RA AV V +V Y ++ P E
Sbjct: 99 RVFGFTDDLGSYEHGKKLSKNRADAVHEELVKTLGPNVTYEVRGYSEDYPIADNSTEAGR 158
Query: 144 AKNRRAIV 151
KNRR V
Sbjct: 159 MKNRRVEV 166
>gi|254246221|ref|ZP_04939542.1| OmpA/MotB [Burkholderia cenocepacia PC184]
gi|124870997|gb|EAY62713.1| OmpA/MotB [Burkholderia cenocepacia PC184]
Length = 183
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 77/167 (46%), Gaps = 15/167 (8%)
Query: 1 MQYSTIFIILSAITMMSISGIDN--------------LDTKISSPDTVLNESSLQEQFSS 46
M + + L+ + + +++ + + +N L + S
Sbjct: 14 MMSNKARLALAVMMISALAACKSGVKLDDKANNAGAVSTQPSADNVAQVNVDPLNDPNSP 73
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRR 105
S++FD SYS++ ++ +L+ H LI+G+ DE G+ ++ALG +R
Sbjct: 74 LAKRSIYFDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNTDERGTSEYNLALGQKR 133
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
A AV G++ S+M+ S GKE P GHDE ++A+NRRA +
Sbjct: 134 AEAVRRAMALLGVNDSQMEAVSLGKEKPQATGHDEASWAQNRRADLV 180
>gi|77919971|ref|YP_357786.1| outer membrane protein/peptidoglycan-associated (lipo)proteins
[Pelobacter carbinolicus DSM 2380]
gi|77546054|gb|ABA89616.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Pelobacter carbinolicus DSM 2380]
Length = 427
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 55/142 (38%), Gaps = 6/142 (4%)
Query: 18 ISGIDNLDTKISSPDTVLNESS----LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
G + D D + Q+ S+ ++ FD I+P L
Sbjct: 280 CMGDADKDGVADQMDKCPGTPAGLMVDQQGCPISLTLAIEFDVDKADIKPRYHSELKRGA 339
Query: 74 SWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKE 131
++ K+ LI GH D S ++AL RRA +V NY ++ I A R++ YG+
Sbjct: 340 DFIRKYPESRILIAGHTDSTASDAYNLALSQRRADSVRNYVISNFGIKAERLEAKGYGEA 399
Query: 132 MPSVYGHDEDAYAKNRRAIVFL 153
P +NRR + +
Sbjct: 400 FPIADNATVQGRQRNRRVELSV 421
>gi|308173338|ref|YP_003920043.1| motility protein MotB [Bacillus amyloliquefaciens DSM 7]
gi|307606202|emb|CBI42573.1| motility protein B; MotB component of the stator flagellum complex
[Bacillus amyloliquefaciens DSM 7]
gi|328911414|gb|AEB63010.1| motility protein B; MotB component of the stator flagellum complex
[Bacillus amyloliquefaciens LL3]
Length = 267
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 51/135 (37%), Gaps = 6/135 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+ L +E ++ DS+FFD+ IR DI + + + + + +I GH D
Sbjct: 129 EHQLETKLTKEGLLITIKDSIFFDSGQAVIRQEDIPLAKEISNLLVLNPPRNIIISGHTD 188
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ S+ L + RA A +G+ P+ + +K
Sbjct: 189 NVPIKNSQFQSNWHLSVMRAVNFMAILTENPKLDAKVFSAKGFGEYKPAASNKTAEGRSK 248
Query: 146 NRRAIVFLKGCRANT 160
NRR V ++ A T
Sbjct: 249 NRRVEVLIQPRNAAT 263
>gi|307728583|ref|YP_003905807.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003]
gi|307583118|gb|ADN56516.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003]
Length = 620
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 2/103 (1%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
F + S + P +VL ++ H L+ GH D +G+ S++ L RA +V +
Sbjct: 489 LFRSGSAVLNPGSNRVLIGALEMIKAHPDKRVLVAGHTDSVGTPASNLKLSEARAASVRD 548
Query: 112 YFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ A +R + YG P E A NRR + L
Sbjct: 549 WLADASGIALTRFAIQGYGDTRPKAPNSTEAGRAANRRVEITL 591
>gi|295681046|ref|YP_003609620.1| type IV / VI secretion system protein, DotU family [Burkholderia
sp. CCGE1002]
gi|295440941|gb|ADG20109.1| type IV / VI secretion system protein, DotU family [Burkholderia
sp. CCGE1002]
Length = 444
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 45/126 (35%), Gaps = 5/126 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
VL E + GD VF IRP VLS + + + + GH D
Sbjct: 318 GQVLVEENGSSSRVVFRGDYVFLP-GQSRIRPELDPVLSRVAQEVARVGGKVTVTGHTDN 376
Query: 92 LGSRNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+ L +RA V + A G+ A R+ G P + ++NR
Sbjct: 377 QPIHTAEFPDNQVLSEKRAAFVADVMKAHGVPAIRIVAIGKGDIQPVADNTTAEGRSRNR 436
Query: 148 RAIVFL 153
R VF+
Sbjct: 437 RVEVFV 442
>gi|167576750|ref|ZP_02369624.1| hypothetical protein BthaT_01360 [Burkholderia thailandensis TXDOH]
Length = 437
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 44/132 (33%), Gaps = 4/132 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ +++ ++ + F + S S+ + VL+ + L + +
Sbjct: 291 EPEIAAGLVSVRDEADRSVIVLRGDGLFGSGSTSVIDRYMPVLTRIADALNRVPGSVRVS 350
Query: 87 GHADELGSRN----SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
G+ D+ S+ L RA AV AR R+ G P
Sbjct: 351 GYTDDTPVHTARFASNWDLSRERAEAVRGLIAARLDRPDRITAEGRGTLDPVAPNDSPAN 410
Query: 143 YAKNRRAIVFLK 154
A+NRR + L
Sbjct: 411 RARNRRVEITLM 422
>gi|86160609|ref|YP_467394.1| OmpA/MotB family outer membrane protein [Anaeromyxobacter
dehalogenans 2CP-C]
gi|85777120|gb|ABC83957.1| outer membrane protein, OmpA/MotB family [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 248
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 53/130 (40%), Gaps = 1/130 (0%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDF 83
D + + + + + + FD+ S +++P I L +G + D
Sbjct: 113 DKQHKELEKIAETKRTENGLLVEMKGDILFDSGSSALKPEAIGKLEQMGDILAKYGDDRI 172
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
IEG+ D GS++ + L LRRA AV V RG+ ++ G P
Sbjct: 173 RIEGYTDSTGSKSMNEELSLRRADAVKRVLVGRGVQEKQITALGMGPVRPVADNGSATGR 232
Query: 144 AKNRRAIVFL 153
A+NRR + +
Sbjct: 233 AQNRRVELHI 242
>gi|319794434|ref|YP_004156074.1| ompa/motb domain protein [Variovorax paradoxus EPS]
gi|315596897|gb|ADU37963.1| OmpA/MotB domain protein [Variovorax paradoxus EPS]
Length = 331
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 34/102 (33%), Gaps = 1/102 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+ FD IRP L + + GH D G + L RRA AV
Sbjct: 228 ILFDLDKDVIRPESQPTLDEMTKLMRNNPPLKLSVVGHTDAQGEAKHNDDLSKRRAVAVI 287
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
V G+ R G P +E AKNRR +
Sbjct: 288 GVLVKAGVDPRRFTTRGAGAAEPVAPNDNEAGRAKNRRVELV 329
>gi|332852270|ref|ZP_08434075.1| outer membrane protein Omp38 [Acinetobacter baumannii 6013150]
gi|332870493|ref|ZP_08439257.1| outer membrane protein Omp38 [Acinetobacter baumannii 6013113]
gi|332729400|gb|EGJ60740.1| outer membrane protein Omp38 [Acinetobacter baumannii 6013150]
gi|332732230|gb|EGJ63498.1| outer membrane protein Omp38 [Acinetobacter baumannii 6013113]
Length = 353
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 56/141 (39%), Gaps = 5/141 (3%)
Query: 20 GIDNLDTKISSPDTVLNESS-LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LE 77
++ P V + L E + + VFFDT+ +I+ ++ + E
Sbjct: 198 AAPVVEVAPVEPTPVAPQPQELTEDLNMEL--RVFFDTNKSNIKDQYKPEIAKVAEKLSE 255
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVY 136
+ IEGH D G R + L L RA +V + V + ASR+ + + P
Sbjct: 256 YPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIAD 315
Query: 137 GHDEDAYAKNRRAIVFLKGCR 157
++ A NRR + G R
Sbjct: 316 NKTKEGRAMNRRVFATITGSR 336
>gi|239501745|ref|ZP_04661055.1| Outer membrane porin F precursor (Root adhesin) [Acinetobacter
baumannii AB900]
Length = 349
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 56/141 (39%), Gaps = 5/141 (3%)
Query: 20 GIDNLDTKISSPDTVLNESS-LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LE 77
++ P V + L E + + VFFDT+ +I+ ++ + E
Sbjct: 194 AAPVVEVAPVEPTPVAPQPQELTEDLNMEL--RVFFDTNKSNIKDQYKPEIAKVAEKLSE 251
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVY 136
+ IEGH D G R + L L RA +V + V + ASR+ + + P
Sbjct: 252 YPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIAD 311
Query: 137 GHDEDAYAKNRRAIVFLKGCR 157
++ A NRR + G R
Sbjct: 312 NKTKEGRAMNRRVFATITGSR 332
>gi|261380477|ref|ZP_05985050.1| OmpA family protein [Neisseria subflava NJ9703]
gi|284796724|gb|EFC52071.1| OmpA family protein [Neisseria subflava NJ9703]
Length = 226
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIR-PADIQVLSNLGSWLEKHDCDFLIEGHA 89
+T + Q + ++V F T S ++ A + + + ++ D I GH
Sbjct: 89 ANTNIEVERQGNQIKLVMPENVTFATGSAALSGHAQSALSAAAQTLVQYPDTTLTINGHT 148
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G+ + L RA +V + +RG+S++R+ YG P + A+NRR
Sbjct: 149 DNTGNDAINEPLSRNRAESVATFLQSRGVSSTRLSTFGYGSRQPIASNATVEGRAQNRRV 208
Query: 150 IVFL 153
+ +
Sbjct: 209 EILI 212
>gi|169794817|ref|YP_001712610.1| putative Outer membrane protein precursor (OmpA-like)
[Acinetobacter baumannii AYE]
gi|213157857|ref|YP_002320655.1| outer membrane protein A [Acinetobacter baumannii AB0057]
gi|215482363|ref|YP_002324545.1| Outer membrane porin F precursor (Root adhesin) [Acinetobacter
baumannii AB307-0294]
gi|301345435|ref|ZP_07226176.1| Outer membrane porin F precursor (Root adhesin) [Acinetobacter
baumannii AB056]
gi|301512590|ref|ZP_07237827.1| Outer membrane porin F precursor (Root adhesin) [Acinetobacter
baumannii AB058]
gi|301595016|ref|ZP_07240024.1| Outer membrane porin F precursor (Root adhesin) [Acinetobacter
baumannii AB059]
gi|169147744|emb|CAM85607.1| putative Outer membrane protein precursor (OmpA-like)
[Acinetobacter baumannii AYE]
gi|213057017|gb|ACJ41919.1| outer membrane protein A [Acinetobacter baumannii AB0057]
gi|213988159|gb|ACJ58458.1| Outer membrane porin F precursor (Root adhesin) [Acinetobacter
baumannii AB307-0294]
Length = 353
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 56/141 (39%), Gaps = 5/141 (3%)
Query: 20 GIDNLDTKISSPDTVLNESS-LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LE 77
++ P V + L E + + VFFDT+ +I+ ++ + E
Sbjct: 198 AAPVVEVAPVEPTPVAPQPQELTEDLNMEL--RVFFDTNKSNIKDQYKPEIAKVAEKLSE 255
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVY 136
+ IEGH D G R + L L RA +V + V + ASR+ + + P
Sbjct: 256 YPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIAD 315
Query: 137 GHDEDAYAKNRRAIVFLKGCR 157
++ A NRR + G R
Sbjct: 316 NKTKEGRAMNRRVFATITGSR 336
>gi|163866830|gb|ABY47585.1| outer membrane protein A [Acinetobacter baumannii]
Length = 341
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 56/141 (39%), Gaps = 5/141 (3%)
Query: 20 GIDNLDTKISSPDTVLNESS-LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LE 77
++ P V + L E + + VFFDT+ +I+ ++ + E
Sbjct: 198 AAPVVEVAPVEPTPVAPQPQELTEDLNMEL--RVFFDTNKSNIKDQYKPEIAKVAEKLSE 255
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVY 136
+ IEGH D G R + L L RA +V + V + ASR+ + + P
Sbjct: 256 YPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIAD 315
Query: 137 GHDEDAYAKNRRAIVFLKGCR 157
++ A NRR + G R
Sbjct: 316 NKTKEGRAMNRRVFATITGSR 336
>gi|129307156|gb|ABO30516.1| outer membrane protein A [Acinetobacter baumannii]
Length = 337
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 56/141 (39%), Gaps = 5/141 (3%)
Query: 20 GIDNLDTKISSPDTVLNESS-LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LE 77
++ P V + L E + + VFFDT+ +I+ ++ + E
Sbjct: 198 AAPVVEVAPVEPTPVAPQPQELTEDLNMEL--RVFFDTNKSNIKDQYKPEIAKVAEKLSE 255
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVY 136
+ IEGH D G R + L L RA +V + V + ASR+ + + P
Sbjct: 256 YPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIAD 315
Query: 137 GHDEDAYAKNRRAIVFLKGCR 157
++ A NRR + G R
Sbjct: 316 NKTKEGRAMNRRVFATITGSR 336
>gi|21666310|gb|AAM73654.1|AF390104_1 outer membrane protein HMP [Acinetobacter baumannii]
Length = 346
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 56/141 (39%), Gaps = 5/141 (3%)
Query: 20 GIDNLDTKISSPDTVLNESS-LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LE 77
++ P V + L E + + VFFDT+ +I+ ++ + E
Sbjct: 198 AAPVVEVAPVEPTPVAPQPQELTEDLNMEL--RVFFDTNKSNIKDQYKPEIAKVAEKLSE 255
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVY 136
+ IEGH D G R + L L RA +V + V + ASR+ + + P
Sbjct: 256 YPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIAD 315
Query: 137 GHDEDAYAKNRRAIVFLKGCR 157
++ A NRR + G R
Sbjct: 316 NKTKEGRAMNRRVFATITGSR 336
>gi|83859799|ref|ZP_00953319.1| Peptidoglycan-associated lipoprotein [Oceanicaulis alexandrii
HTCC2633]
gi|83852158|gb|EAP90012.1| Peptidoglycan-associated lipoprotein [Oceanicaulis alexandrii
HTCC2633]
Length = 170
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 62/126 (49%), Gaps = 1/126 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGH 88
+P+ E F + GD VFF +++ L +WL + LI G+
Sbjct: 40 APEPAGPTPGSVEDFEVNAGDRVFFALDQHTLSNEARATLRRQAAWLSSYPGARILIAGN 99
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
DE G+R ++ALG RRA A ++ V++G+ SR+ SYGKE P E +A NR
Sbjct: 100 CDERGTREYNLALGARRANAARDFLVSQGVDPSRISTVSYGKERPVCNQSTEQCWATNRN 159
Query: 149 AIVFLK 154
A+ ++
Sbjct: 160 AMTVIQ 165
>gi|304311338|ref|YP_003810936.1| Putative outer membrane protein [gamma proteobacterium HdN1]
gi|301797071|emb|CBL45284.1| Putative outer membrane protein [gamma proteobacterium HdN1]
Length = 208
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 56/123 (45%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
+T ++ + E ++ ++ F ++ + P+ VL ++ L++ + + GH D
Sbjct: 83 NTGVSVTRTPEGIKLNMPGAISFPSNQSGLMPSFYPVLESVALVLKEFNNTAIKVSGHTD 142
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + L +RA +V + +G++ +RM+V YG P E A NRR
Sbjct: 143 STGGAELNQRLSEQRAESVAAFLSGQGVARARMQVYGYGPRYPVADNKSEAGKAANRRVE 202
Query: 151 VFL 153
+ +
Sbjct: 203 IDI 205
>gi|326316639|ref|YP_004234311.1| peptidoglycan-associated lipoprotein [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323373475|gb|ADX45744.1| peptidoglycan-associated lipoprotein [Acidovorax avenae subsp.
avenae ATCC 19860]
Length = 181
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/173 (24%), Positives = 76/173 (43%), Gaps = 24/173 (13%)
Query: 3 YSTIFIILSAITMMSISGI-----------------------DNLDTKISSPDTVLNESS 39
+ I + L+ +M+ N +++ LN+S+
Sbjct: 6 FKRISLALTVAALMAGCSSGVKLEDVPVENKGATSTAPNGANSNGNSQSGVAPVDLNQSA 65
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSS 98
V V+FD SY ++P ++ +++ +IEGH D+ G R +
Sbjct: 66 RDAAGPVGVARIVYFDFDSYVVKPEYQSLIEQHARFIKASQGRKVMIEGHTDDRGGREYN 125
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ALG +RA AV G+ +M+ S+GKE P+V G+ EDA+++NRR +
Sbjct: 126 LALGQKRAEAVRRALGLLGVPDGQMEAVSFGKEKPAVQGNTEDAFSQNRRVEL 178
>gi|224372468|ref|YP_002606840.1| thrombospondin type 3 repeat:OmpA/MotB [Nautilia profundicola AmH]
gi|223589113|gb|ACM92849.1| thrombospondin type 3 repeat:OmpA/MotB [Nautilia profundicola AmH]
Length = 373
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+ FD S I+P ++ + +L+++ I+G+ D GS + L RRA AV+
Sbjct: 269 ITFDNDSADIKPQFMKKIEEFAEFLKQNPAYKAEIQGYTDSKGSAEYNQKLSERRAKAVY 328
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +GIS R+ YG+ P D A+NRR + +
Sbjct: 329 EVLIKQGISKDRLSYKGYGEANPVASNDTPDGKAQNRRVVAKI 371
>gi|149922900|ref|ZP_01911321.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
gi|149816217|gb|EDM75723.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
Length = 517
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 53/139 (38%), Gaps = 7/139 (5%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDS------VFFDTSSYSIRPADIQVLSN-LGS 74
D + + + +E ++ V + F+T S IR + + L +
Sbjct: 374 DKCPDEPETANGYQDEDGCADEVPKEVAAFTGAIKGITFETDSDKIRKSSTRTLDKAVKV 433
Query: 75 WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
+ D + GH D G + ++ L RRA +V Y V GI ASR+ +G + P
Sbjct: 434 LTDFPDIRIKVTGHTDSRGDHDHNVDLSKRRAESVKTYLVEHGIDASRITTDGFGPDKPV 493
Query: 135 VYGHDEDAYAKNRRAIVFL 153
A NRR +
Sbjct: 494 DTNDTRAGRANNRRIEFEI 512
>gi|54307294|ref|YP_128314.1| putative OmpA family protein [Photobacterium profundum SS9]
gi|46911714|emb|CAG18512.1| Putative OmpA family protein [Photobacterium profundum SS9]
Length = 241
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 52/137 (37%), Gaps = 1/137 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
+ + T ++ + + ++ + + F + + L N+ +++D
Sbjct: 104 VQETKLRQQLESTGISVTRDGDNIVLNMPNEITFGFDQSDLSSRAVAALKNVALVAKEYD 163
Query: 81 CD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ G D GS + + L RA V + + G++A+R+ G+ P
Sbjct: 164 KTLINVYGFTDSTGSASYNQRLSQVRASEVSSNLMRGGVAANRVITKGMGEANPIASNKT 223
Query: 140 EDAYAKNRRAIVFLKGC 156
E A+NRR + L
Sbjct: 224 EQGRAENRRVEIVLSPT 240
>gi|114319403|ref|YP_741086.1| OmpA/MotB domain-containing protein [Alkalilimnicola ehrlichii
MLHE-1]
gi|114225797|gb|ABI55596.1| OmpA/MotB domain protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 184
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 27/176 (15%)
Query: 6 IFIILSAITMMSISGIDNLDTK--------------------------ISSPDTVLNESS 39
I + ++ + + + + + +++T P +
Sbjct: 8 IALAIAGLFLAACATVTDVETDDRRVSDRERMADEDWSEQRLEEARARGLDPSDPFISAL 67
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSS 98
+ + +V+FD IR D+ V+ +L H IEGH DE GSR +
Sbjct: 68 MDDPEGPLSRQTVYFDFDRSEIRNEDMPVIEAHARFLSGHPDRRMTIEGHTDERGSREYN 127
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ALG RRA AV V G+ +++VTSYG+E P G +E+A+ +NRRA + +
Sbjct: 128 LALGERRAEAVKRIMVLNGVDEDQLEVTSYGEENPVALGSNEEAWQQNRRAELIYR 183
>gi|306820125|ref|ZP_07453773.1| chemotaxis protein MotB [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304551903|gb|EFM39846.1| chemotaxis protein MotB [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 250
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 8/134 (5%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGH 88
+ ++ S+ +E DS FD S +++P VL +G L+ + +EGH
Sbjct: 108 EKQISISNEEEGLVLRFQDSSLFDQGSATLKPQSYNVLKYVGGILKSKNFKDKFVSVEGH 167
Query: 89 ADELG----SRNSSIALGLRRAYAVFNYFV-ARGISASRMKVTSYGKEMPSVYGHDEDAY 143
D + + S+ L RA V Y + +GI R+ YG+ P
Sbjct: 168 TDNVPISTSTHQSNWELSSNRASNVVRYLIENQGIDPKRLSTAGYGEYHPVAPNDTPANM 227
Query: 144 AKNRRAIVFLKGCR 157
AKNRR + + +
Sbjct: 228 AKNRRVDIMILRTK 241
>gi|261854755|ref|YP_003262038.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
gi|261835224|gb|ACX94991.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
Length = 364
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
D +FFD+ ++P L + ++ LI GH D+ GS ++ L +RA A
Sbjct: 259 DGIFFDSGKALLKPESNPALDQAVQLLRQQASLKLLIAGHTDDTGSHAANQKLSQQRAEA 318
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
V N +ARGI+A R+ +G +P + A+NRR +
Sbjct: 319 VRNALLARGIAADRLTAQGFGSGVPLADNASDAGRAQNRRVELV 362
>gi|332519368|ref|ZP_08395835.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
gi|332045216|gb|EGI81409.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
Length = 370
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 58/135 (42%), Gaps = 2/135 (1%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ L + V L+ + + + + F+ + I+ L L L+++
Sbjct: 233 SVTTLKLSKKTLSKVDKAKPLETKTIYTFKN-ILFEFDKAILVNTSIEELDKLNLHLKEN 291
Query: 80 -DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ + I GH D +G + L L+RA +V Y +++G+ R++ +G P V
Sbjct: 292 KNLNIEIYGHTDNIGLAKRNQELSLQRAKSVSEYLISKGLKKERIQWFGFGSSKPLVKNS 351
Query: 139 DEDAYAKNRRAIVFL 153
ED AKNRR L
Sbjct: 352 SEDNRAKNRRVEFKL 366
>gi|327399143|ref|YP_004340012.1| peptidoglycan-associated lipoprotein [Hippea maritima DSM 10411]
gi|327181772|gb|AEA33953.1| peptidoglycan-associated lipoprotein [Hippea maritima DSM 10411]
Length = 172
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 72/170 (42%), Gaps = 18/170 (10%)
Query: 1 MQYSTIFI---ILSAITMMSIS-----GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV 52
M+ + ++ +MS G+ N KI + + D +
Sbjct: 1 MKRKGKLVSASLIGVAFLMSGCMCMHKGVQNAPKKIVVEKPATTTQQAKVDLKTIFTD-I 59
Query: 53 FFDTSSYSIRP--------ADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGL 103
F+ Y++ VL + ++ + + IEG+ DE G+ ++ALG
Sbjct: 60 HFNFDKYNLTYINKWGIKQNVPAVLDGIAQYMVKHPNVRIRIEGNCDERGTVEYNLALGQ 119
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+RA A Y VA+G++ R+ + SYG+ P H+E A+AKNRR +
Sbjct: 120 KRALAAKKYLVAKGVNPDRIDIISYGESRPLDPAHNEYAWAKNRRDHFVI 169
>gi|317127982|ref|YP_004094264.1| OmpA/MotB domain protein [Bacillus cellulosilyticus DSM 2522]
gi|315472930|gb|ADU29533.1| OmpA/MotB domain protein [Bacillus cellulosilyticus DSM 2522]
Length = 484
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 54/133 (40%), Gaps = 5/133 (3%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL--GSWLEKHDCD 82
++S P+ V E + D + FD S++ +V+ + K
Sbjct: 349 PPELSVPEEVFITKDDGETM-LTFPDDILFDFDQSSLKEEAKEVIKEVLPALDSLKDGTI 407
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK--VTSYGKEMPSVYGHDE 140
I GH D G + + L RA +V+N+ G S ++ V ++G+ P DE
Sbjct: 408 IEIRGHTDNEGDPDYNYILSEERAESVYNFVRNSGESLDHIEFRVKAFGETAPIASNEDE 467
Query: 141 DAYAKNRRAIVFL 153
+ +NRR + +
Sbjct: 468 EGRERNRRVELVI 480
>gi|260426127|ref|ZP_05780106.1| OmpA domain protein [Citreicella sp. SE45]
gi|260420619|gb|EEX13870.1| OmpA domain protein [Citreicella sp. SE45]
Length = 649
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 2/123 (1%)
Query: 33 TVLNESSLQEQFSSSVGDS-VFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHAD 90
+ + Q VGD + F+ S ++ + V+ ++ L+ D I+GH D
Sbjct: 478 GIPTPDECEAQIVEIVGDRKINFEPGSANLDASAKDVMDDIAELLKLCGDIPLEIQGHTD 537
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + + L RA AV + R + + +V YG+E P E+ NRR
Sbjct: 538 SQGRESMNQQLSQDRAQAVLDALRNRRVLTASYRVRGYGEEQPIADNKTEEGREANRRIE 597
Query: 151 VFL 153
L
Sbjct: 598 FRL 600
>gi|126642864|ref|YP_001085848.1| outer membrane protein A [Acinetobacter baumannii ATCC 17978]
Length = 346
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 56/141 (39%), Gaps = 5/141 (3%)
Query: 20 GIDNLDTKISSPDTVLNESS-LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LE 77
++ P V + L E + + VFFDT+ +I+ ++ + E
Sbjct: 191 AAPVVEVAPVEPTPVTPQPQELTEDLNMEL--RVFFDTNKSNIKDQYKPEIAKVAEKLSE 248
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVY 136
+ IEGH D G R + L L RA +V + V + ASR+ + + P
Sbjct: 249 YPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIAD 308
Query: 137 GHDEDAYAKNRRAIVFLKGCR 157
++ A NRR + G R
Sbjct: 309 NKTKEGRAMNRRVFATITGSR 329
>gi|282853319|ref|ZP_06262656.1| OmpA family protein [Propionibacterium acnes J139]
gi|282582772|gb|EFB88152.1| OmpA family protein [Propionibacterium acnes J139]
gi|314922410|gb|EFS86241.1| OmpA family protein [Propionibacterium acnes HL001PA1]
gi|314965447|gb|EFT09546.1| OmpA family protein [Propionibacterium acnes HL082PA2]
gi|314982607|gb|EFT26699.1| OmpA family protein [Propionibacterium acnes HL110PA3]
gi|315091130|gb|EFT63106.1| OmpA family protein [Propionibacterium acnes HL110PA4]
gi|315094263|gb|EFT66239.1| OmpA family protein [Propionibacterium acnes HL060PA1]
gi|327329241|gb|EGE71001.1| putative outer membrane protein A [Propionibacterium acnes
HL103PA1]
Length = 363
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 49/136 (36%), Gaps = 2/136 (1%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW--LEK 78
++ L T E +E + SV FD S ++PA Q++ K
Sbjct: 226 VNALVTTTGDASDASRERVTKESMKIDLDASVLFDLDSDVVKPAGRQIIDRTAKQLVARK 285
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ G+ D GS + ++ L RRA +V ++ + G+ P
Sbjct: 286 VSGKIEVTGYTDNSGSASHNLDLSRRRAASVAKVLGSQLSKGITLVTAGKGEADPVASND 345
Query: 139 DEDAYAKNRRAIVFLK 154
E NRR + +K
Sbjct: 346 SEAGRCLNRRVTITVK 361
>gi|261341331|ref|ZP_05969189.1| peptidoglycan-associated lipoprotein [Enterobacter cancerogenus
ATCC 35316]
gi|296103328|ref|YP_003613474.1| peptidoglycan-associated outer membrane lipoprotein [Enterobacter
cloacae subsp. cloacae ATCC 13047]
gi|288316636|gb|EFC55574.1| peptidoglycan-associated lipoprotein [Enterobacter cancerogenus
ATCC 35316]
gi|295057787|gb|ADF62525.1| peptidoglycan-associated outer membrane lipoprotein [Enterobacter
cloacae subsp. cloacae ATCC 13047]
Length = 173
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 53/172 (30%), Positives = 79/172 (45%), Gaps = 20/172 (11%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDTVLNESSLQE-------------- 42
MQ + + I L + + + S N S + + +
Sbjct: 1 MQLNKVLKGLMIALPVMAIAACSSNKNASNDQSGEGMMGAGTGMDANGNGNMSSEEQARL 60
Query: 43 -QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIA 100
+ V+FD Y IR +L ++L + +EGHADE G+ +I+
Sbjct: 61 QMQQLQQNNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADERGTPEYNIS 120
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
LG RRA AV Y +G+SA ++ + SYGKE P+V GHDE AYAKNRRA++
Sbjct: 121 LGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYAKNRRAVLV 172
>gi|254467574|ref|ZP_05080983.1| YceI like family [Rhodobacterales bacterium Y4I]
gi|206684322|gb|EDZ44806.1| YceI like family [Rhodobacterales bacterium Y4I]
Length = 327
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/123 (26%), Positives = 51/123 (41%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHAD 90
E+ S G SV F S+ + + L++L + + + + GH D
Sbjct: 203 GDFSREACTGRFEILSQGRSVNFAPSTARLDASSRDFLNSLSDIIRRCPGMIVEVGGHTD 262
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G ++AL +RA AV Y +GI + R+ YG+ P V + AKNRR
Sbjct: 263 SQGKAAWNMALSEKRAAAVNQYLQKKGIPSERLVAVGYGETTPLVPNNTAQNRAKNRRIE 322
Query: 151 VFL 153
+
Sbjct: 323 FKV 325
>gi|197106106|ref|YP_002131483.1| OmpA family protein [Phenylobacterium zucineum HLK1]
gi|196479526|gb|ACG79054.1| OmpA family protein [Phenylobacterium zucineum HLK1]
Length = 178
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 19/175 (10%)
Query: 2 QYSTIFIILSAITMMSISGI----------------DNLDTKISSPDTVLNESSLQEQFS 45
+++T+ I +A + +P QE +
Sbjct: 4 KFATVLITAAAALSLGACASRPKAAAPTVPPAASAPAETAAPAPAPAMGAVVPGSQEDLA 63
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLR 104
++ G+ V+F S + VL +W IEG+ADE G+R ++ALG R
Sbjct: 64 ANAGERVYFALDSDLLDAEARSVLQLQAAWLQRNPTVRARIEGNADERGTREYNLALGAR 123
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR--RAIVFLKGCR 157
RA A + + G+ ++R++ SYGKE P G E+A+A+NR R +V G R
Sbjct: 124 RAQAARQFLIRSGVDSTRLETISYGKERPIDPGSTEEAWARNRNARTVVIGLGER 178
>gi|124007996|ref|ZP_01692696.1| outer membrane protein [Microscilla marina ATCC 23134]
gi|123986580|gb|EAY26379.1| outer membrane protein [Microscilla marina ATCC 23134]
Length = 336
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 46/117 (39%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRN 96
+ +++ + + F +SS + ++ + + E + GH D G
Sbjct: 217 VTPIEKGVKILLNNLFFGVSSSKIESTSFDELDRLVRTLNEYPKMVVQLNGHTDNQGGAT 276
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA +V NY +GI+ R+KV +G P + +NRR +
Sbjct: 277 RNQLLSQHRARSVRNYLANKGIARHRVKVKGFGASQPIADNNTLKGRIRNRRVEFEV 333
>gi|257126222|ref|YP_003164336.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b]
gi|257050161|gb|ACV39345.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b]
Length = 225
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 74/166 (44%), Gaps = 18/166 (10%)
Query: 8 IILSAITMMS--ISGIDNLDTKIS---------SPDTVLNESSLQEQFSSSVGDSVF--- 53
++++A+ + + ++ + I +TV + E + VF
Sbjct: 19 LLVAAVPLSARKLTTTQMRENTIRINALEIEEPGDNTVPAKKITCEDIMGPIQPIVFDEG 78
Query: 54 ---FDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
FD ++P +L L +L + D + I GH D GS ++ALG+RRA AV
Sbjct: 79 ALNFDFDKSYVKPYYNGLLGILKEFLNEKDYNVGITGHTDSKGSDAYNMALGMRRAKAVK 138
Query: 111 NYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+ + G+S+SR++ + S G+ P ++ A+NRR ++
Sbjct: 139 DRLIELGLSSSRIRGIDSKGESEPIATNETDEGRAQNRRIEFDVRN 184
>gi|126734660|ref|ZP_01750406.1| OmpA domain protein [Roseobacter sp. CCS2]
gi|126715215|gb|EBA12080.1| OmpA domain protein [Roseobacter sp. CCS2]
Length = 632
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 44/124 (35%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHA 89
E + + +++ G + FD S + V+ ++ L+ D + G
Sbjct: 476 AGIPTPEECIAQITAATEGRKITFDPGSADLTADTQPVVDDIADILKACGDLRIKVSGFT 535
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G + L RA AV AR + S +G+E P E+ NRR
Sbjct: 536 DSQGGEVMNQQLSQDRADAVLTALRARRVPVSTFTSIGFGEENPIADNDTEEGREANRRI 595
Query: 150 IVFL 153
L
Sbjct: 596 EFSL 599
>gi|90022262|ref|YP_528089.1| OmpA family protein [Saccharophagus degradans 2-40]
gi|89951862|gb|ABD81877.1| OmpA/MotB [Saccharophagus degradans 2-40]
Length = 225
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRA 106
+ ++ FDT+ YSIR +VL ++ L+K+D L+ GH D GS + + L +RA
Sbjct: 115 MPGNITFDTAQYSIRSQFYEVLDSVAVVLKKYDKTAILVSGHTDNRGSSDYNQTLSEQRA 174
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+V Y + +G++A R+ YG P +NRR + L+
Sbjct: 175 GSVKAYLMQKGVAAGRVNSVGYGYRYPVASNDSAAGREQNRRVELKLE 222
>gi|327393167|dbj|BAK10589.1| peptidoglycan-associated lipoprotein precursor Pal [Pantoea
ananatis AJ13355]
Length = 174
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 54/173 (31%), Positives = 82/173 (47%), Gaps = 21/173 (12%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISS----------------PDTVLNESSL 40
MQ + + + L + + + S N + S + +E +
Sbjct: 1 MQLNKVLKGLMLALPIMAVAACSSHKNNNNDQSGAGADGAYGANSGMNGNGNMSSDEQAR 60
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSI 99
+ + V+F Y ++ Q+L ++L + IEGHADE G+ +I
Sbjct: 61 LQMQQLQQNNIVYFGLDKYDVQSDYAQMLDQHANFLRSNPSYKVTIEGHADERGTPEYNI 120
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
ALG RRA AV Y +G+SA +M + SYGKE P+V GHDE AYAKNRRA++
Sbjct: 121 ALGERRANAVKMYLQGKGVSADQMSIVSYGKEKPAVLGHDEAAYAKNRRAVLV 173
>gi|311694925|gb|ADP97798.1| peptidoglycan-associated lipoprotein [marine bacterium HP15]
Length = 190
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 1/132 (0%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCD 82
+ + + + + EQ + + +FD + I+ VL + +
Sbjct: 59 VSSSAMTEEERMEARKQAEQQALREITTFYFDFDTAEIKQEARDVLVAHARFLANNPGQN 118
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
IEGHADE G++ ++ALG RRA AV + + G S +++ SYG+E P+V G E A
Sbjct: 119 VRIEGHADERGTKEYNLALGERRANAVQRFLIVNGASRGQLETVSYGEEKPAVMGSSESA 178
Query: 143 YAKNRRAIVFLK 154
+A+NRR + +
Sbjct: 179 WAQNRRVELVFE 190
>gi|304393653|ref|ZP_07375581.1| OmpA/MotB [Ahrensia sp. R2A130]
gi|303294660|gb|EFL89032.1| OmpA/MotB [Ahrensia sp. R2A130]
Length = 1102
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 53/133 (39%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHD 80
+ ++ + + G + FD + I+ + +L +L + + D
Sbjct: 965 APKEDTPEPASEEVSAACPVDFQQILRGKKILFDNNRAFIKASSYPLLDSLVDGFSKCSD 1024
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+I GH D +G +++L RA AV +Y +GI + +G+ P +
Sbjct: 1025 ARVMISGHTDAVGRDAYNLSLSQSRAQAVLDYIAGKGIDVDAFEAAGFGETKPIADNATD 1084
Query: 141 DAYAKNRRAIVFL 153
A NRR ++ +
Sbjct: 1085 TGRAANRRIVIEV 1097
>gi|229543005|ref|ZP_04432065.1| OmpA/MotB domain protein [Bacillus coagulans 36D1]
gi|229327425|gb|EEN93100.1| OmpA/MotB domain protein [Bacillus coagulans 36D1]
Length = 274
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 8/136 (5%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+ S E ++ D+V FD+ +R DI+ L + + ++ GH D
Sbjct: 137 EGKFETSLTGEGLLITIRDNVLFDSGKAEVRKEDIKTAKALSNLLVMDPPRSIIVSGHTD 196
Query: 91 ELGSR----NSSIALGLRR-AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ S+ L + R + + ++ YG+ P + AK
Sbjct: 197 NVPIHNSVFQSNWDLSVMRATNFLKIILENKNLNPKYFSAKGYGEYHPIASNDTQGGRAK 256
Query: 146 NRRAIVFL--KGCRAN 159
NRR V + K + N
Sbjct: 257 NRRVEVLILPKNEKGN 272
>gi|213962352|ref|ZP_03390615.1| outer membrane protein OmpA family P60 [Capnocytophaga sputigena
Capno]
gi|213955018|gb|EEB66337.1| outer membrane protein OmpA family P60 [Capnocytophaga sputigena
Capno]
Length = 360
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 1/104 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
++ FDT ++P +L N+ E D +F++EGH D G+ ++ L RA A+
Sbjct: 252 TILFDTDKSVVKPQAEFILDNIAIIMNENPDFNFVVEGHTDNTGTPEHNLKLSQDRADAI 311
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
Y G+S R++ YG+ P E NRR + +
Sbjct: 312 KQYLSRHGVSKKRLEAKGYGQTRPIESNDTERGKEINRRVEINV 355
>gi|161504089|ref|YP_001571201.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. arizonae serovar 62:z4,z23:-- str.
RSK2980]
gi|160865436|gb|ABX22059.1| hypothetical protein SARI_02187 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 174
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 54/173 (31%), Positives = 79/173 (45%), Gaps = 21/173 (12%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDT----------------VLNESSL 40
MQ + + I L + + + S N S E +
Sbjct: 1 MQLNKVLKGLMIALPVMAVAACSSNKNASNDGSEGGMLNGAGTGMDANGNGNMSSEEQAR 60
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSI 99
+ + V+FD Y IR +L ++L + +EGHADE G+ +I
Sbjct: 61 LQMQQLQQNNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADERGTPEYNI 120
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+LG RRA AV Y +G+SA ++ + SYGKE P+V GHDE AYAKNRRA++
Sbjct: 121 SLGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYAKNRRAVLV 173
>gi|330961246|gb|EGH61506.1| flagellar motor protein MotD [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 265
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 18/127 (14%), Positives = 44/127 (34%), Gaps = 4/127 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ + + S+ F + ++ + +++ D +EG D+
Sbjct: 118 SDQMTVRGNELWVEIELNSSMLFGSGDAMPSDKAFSIIEKVSGIVKRFDNPIHVEGFTDD 177
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
++ L R+ ++ G++ +R+ YG+ P AKNR
Sbjct: 178 QPINTSQFPTNWELSSARSASIVRMLAMDGVNPARLASVGYGEFQPIAPNTTAAGRAKNR 237
Query: 148 RAIVFLK 154
R ++ +
Sbjct: 238 RVVLVIS 244
>gi|325286110|ref|YP_004261900.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
gi|324321564|gb|ADY29029.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
Length = 372
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 52/126 (41%), Gaps = 1/126 (0%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIE 86
+ + + E+ +V F+ + + A + ++ L + + I
Sbjct: 243 AETVPQKADATPKIERNKVYTFKNVLFEFNKADLLTASEEEINVLTTILRNNNKLSIEIY 302
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
GH D +GS+ ++ L +RA AV +Y + GI +R+K YG P E+ +N
Sbjct: 303 GHTDAVGSKERNLELSNQRAKAVASYLIDSGIDENRVKWIGYGSSKPVADNTTEEGRTQN 362
Query: 147 RRAIVF 152
RR
Sbjct: 363 RRVEFK 368
>gi|293603504|ref|ZP_06685926.1| OmpA family protein [Achromobacter piechaudii ATCC 43553]
gi|292818090|gb|EFF77149.1| OmpA family protein [Achromobacter piechaudii ATCC 43553]
Length = 210
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 57/133 (42%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
D++ +S + ++ V FDT ++PA + VL ++ + +
Sbjct: 73 DDVQQSGASSLGIDVVEMPDGSLKVNIPSGVSFDTDKTQLKPALLPVLDSVARSLNQHPE 132
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ GH D G+ + L + RA +V +Y +G++A+R+ + G P
Sbjct: 133 LRAKVVGHTDSTGALAHNQTLSVNRARSVTDYLAKQGVAATRLAIEGRGPSDPIGDNATA 192
Query: 141 DAYAKNRRAIVFL 153
+ A NRR ++L
Sbjct: 193 EGRALNRRVEIYL 205
>gi|253998497|ref|YP_003050560.1| OmpA/MotB domain-containing protein [Methylovorus sp. SIP3-4]
gi|253985176|gb|ACT50033.1| OmpA/MotB domain protein [Methylovorus sp. SIP3-4]
Length = 313
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 49/144 (34%), Gaps = 4/144 (2%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
M +++ + + + DS+ F + ++P L+ +
Sbjct: 105 AMTAMANNLANHLAPMVLEGKIKVMQNNRGVRVDIHDSLLFAPGASELQPIASGPLNEIA 164
Query: 74 SWLEKHDCDFLIEGHADELGSR----NSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
L+ ++ +EGH D + S+ L RA +V G+ R+ +G
Sbjct: 165 QALKANNHAIQVEGHTDNVPIHNDKFYSNWELSAMRASSVVRMLQDSGLDEKRLSAVGFG 224
Query: 130 KEMPSVYGHDEDAYAKNRRAIVFL 153
P A+NRR + +
Sbjct: 225 ASQPLEDNSTPLGRARNRRVSIMI 248
>gi|224582568|ref|YP_002636366.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Paratyphi C strain
RKS4594]
gi|224467095|gb|ACN44925.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica
subsp. enterica serovar Paratyphi C strain RKS4594]
gi|323129061|gb|ADX16491.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica
subsp. enterica serovar Typhimurium str. 4/74]
gi|326622475|gb|EGE28820.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica
subsp. enterica serovar Dublin str. 3246]
gi|326627054|gb|EGE33397.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica
subsp. enterica serovar Gallinarum str. 9]
Length = 182
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 54/173 (31%), Positives = 79/173 (45%), Gaps = 21/173 (12%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDT----------------VLNESSL 40
MQ + + I L + + + S N S E +
Sbjct: 9 MQLNKVLKGLMIALPVMAIAACSSNKNASNDGSEGGMLNGAGTGMDANGNGNMSSEEQAR 68
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSI 99
+ + V+FD Y IR +L ++L + +EGHADE G+ +I
Sbjct: 69 LQMQQLQQNNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADERGTPEYNI 128
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+LG RRA AV Y +G+SA ++ + SYGKE P+V GHDE AYAKNRRA++
Sbjct: 129 SLGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYAKNRRAVLV 181
>gi|91776019|ref|YP_545775.1| OmpA/MotB [Methylobacillus flagellatus KT]
gi|91710006|gb|ABE49934.1| OmpA/MotB [Methylobacillus flagellatus KT]
Length = 214
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 53/135 (39%), Gaps = 1/135 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ + V + Q S+ + F + I P VL N + L+ +
Sbjct: 73 EQKRQMEEATKDTGVEVSQTEDNQLKLSIPSDISFASGKADIEPNFRVVLDNFATTLKNN 132
Query: 80 DCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
I GH D GS + L + RA +Y +ARGI+ASR + G P V
Sbjct: 133 PNTLVTIIGHTDNTGSDAINNPLSVNRAANTRDYLIARGIAASRFTIDGRGSREPLVSND 192
Query: 139 DEDAYAKNRRAIVFL 153
AKNRR +F+
Sbjct: 193 TPANRAKNRRVEIFV 207
>gi|117919117|ref|YP_868309.1| OmpA/MotB domain-containing protein [Shewanella sp. ANA-3]
gi|117611449|gb|ABK46903.1| OmpA/MotB domain protein [Shewanella sp. ANA-3]
Length = 230
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 59/134 (44%), Gaps = 1/134 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH- 79
+ + T ++ + + ++ + V F + +VL+++ +++
Sbjct: 92 VQETKLRQQLASTGVSVTRDGDNIVLNMPNEVTFGVDQTELSDGAKRVLNSVALVAKEYS 151
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ G+ D GS + ++ L RA V NY +++G++++R+K G+ P +
Sbjct: 152 KTQLNVLGYTDSSGSDSYNLRLSQVRASEVGNYLMSKGVASARVKSKGMGEASPIASNAN 211
Query: 140 EDAYAKNRRAIVFL 153
A+NRR + L
Sbjct: 212 AAGRAQNRRVEIVL 225
>gi|313200583|ref|YP_004039241.1| ompa/motb domain-containing protein [Methylovorus sp. MP688]
gi|312439899|gb|ADQ84005.1| OmpA/MotB domain protein [Methylovorus sp. MP688]
Length = 313
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 49/144 (34%), Gaps = 4/144 (2%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
M +++ + + + DS+ F + ++P L+ +
Sbjct: 105 AMTAMANNLANHLAPMVLEGKIKVMQNNRGVRVDIHDSLLFAPGASELQPIASGPLNEIA 164
Query: 74 SWLEKHDCDFLIEGHADELGSR----NSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
L+ ++ +EGH D + S+ L RA +V G+ R+ +G
Sbjct: 165 QALKANNHAIQVEGHTDNVPIHNDKFYSNWELSAMRASSVVRMLQDSGLDEKRLSAVGFG 224
Query: 130 KEMPSVYGHDEDAYAKNRRAIVFL 153
P A+NRR + +
Sbjct: 225 ASQPLEDNSTPLGRARNRRVSIMI 248
>gi|209695291|ref|YP_002263220.1| outer membrane protein A [Aliivibrio salmonicida LFI1238]
gi|208009243|emb|CAQ79504.1| outer membrane protein A [Aliivibrio salmonicida LFI1238]
Length = 367
Score = 78.3 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 53/134 (39%), Gaps = 1/134 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
G I+ PD + ++ + + F S + ++ L+ +
Sbjct: 224 GSKEEVVVIAEPDPPVRIVKAEKLTLNELNGQALFGFDSAKLSSEVEAHFDSILERLKNN 283
Query: 80 DCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
I GH D GS + L LRRA +V NYF + GI+ SR+KV G+ P +
Sbjct: 284 PTSELSIVGHTDSQGSDKYNEGLSLRRAQSVANYFESNGIAMSRIKVEGRGETDPVADNN 343
Query: 139 DEDAYAKNRRAIVF 152
+ NRR +
Sbjct: 344 TLKGRSMNRRVDLI 357
>gi|260548855|ref|ZP_05823077.1| outer membrane protein omp38 [Acinetobacter sp. RUH2624]
gi|260408023|gb|EEX01494.1| outer membrane protein omp38 [Acinetobacter sp. RUH2624]
Length = 350
Score = 78.3 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 56/141 (39%), Gaps = 5/141 (3%)
Query: 20 GIDNLDTKISSPDTVLNESS-LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LE 77
++ P V + L E + + VFFDT+ +I+ ++ + E
Sbjct: 201 AAPVVEVAPVEPTPVAPQPQELTEDLNMEL--RVFFDTNKSNIKDQYKPEIAKVAEKLSE 258
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVY 136
+ IEGH D G R + L L RA +V + V + ASR+ + + P
Sbjct: 259 YPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIAD 318
Query: 137 GHDEDAYAKNRRAIVFLKGCR 157
++ A NRR + G R
Sbjct: 319 NKTKEGRAMNRRVFATITGSR 339
>gi|16759688|ref|NP_455305.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Typhi str. CT18]
gi|16764119|ref|NP_459734.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|29142539|ref|NP_805881.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Typhi str. Ty2]
gi|56414134|ref|YP_151209.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Paratyphi A str. ATCC
9150]
gi|62179323|ref|YP_215740.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|161615017|ref|YP_001588982.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Paratyphi B str. SPB7]
gi|167554283|ref|ZP_02348024.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|167995342|ref|ZP_02576432.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|168238899|ref|ZP_02663957.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|168240607|ref|ZP_02665539.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|168264359|ref|ZP_02686332.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|168467688|ref|ZP_02701525.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|168820116|ref|ZP_02832116.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|194444000|ref|YP_002039990.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|194450609|ref|YP_002044783.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|194735900|ref|YP_002113856.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|197263376|ref|ZP_03163450.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197363056|ref|YP_002142693.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Paratyphi A str.
AKU_12601]
gi|198245566|ref|YP_002214719.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|200390868|ref|ZP_03217479.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204929814|ref|ZP_03220835.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205352013|ref|YP_002225814.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Gallinarum str. 287/91]
gi|207856193|ref|YP_002242844.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Enteritidis str.
P125109]
gi|213027105|ref|ZP_03341552.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
gi|213051768|ref|ZP_03344646.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213423403|ref|ZP_03356390.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
gi|213427708|ref|ZP_03360458.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Typhi str. E02-1180]
gi|213582020|ref|ZP_03363846.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Typhi str. E98-0664]
gi|213609989|ref|ZP_03369815.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Typhi str. E98-2068]
gi|213649745|ref|ZP_03379798.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Typhi str. J185]
gi|213857528|ref|ZP_03384499.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Typhi str. M223]
gi|289827212|ref|ZP_06545932.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
gi|25298548|pir||AI0592 peptidoglycan-associated lipoprotein precursor [imported] -
Salmonella enterica subsp. enterica serovar Typhi
(strain CT18)
gi|16419259|gb|AAL19693.1| tol protein required for outer membrane integrity [Salmonella
enterica subsp. enterica serovar Typhimurium str. LT2]
gi|16501981|emb|CAD05211.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica
subsp. enterica serovar Typhi]
gi|29138170|gb|AAO69741.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica
subsp. enterica serovar Typhi str. Ty2]
gi|56128391|gb|AAV77897.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|62126956|gb|AAX64659.1| tol protein required for outer membrane integrity, uptake of group
A colicins, and translocation of phage DNA to cytoplasm
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|161364381|gb|ABX68149.1| hypothetical protein SPAB_02777 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194402663|gb|ACF62885.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194408913|gb|ACF69132.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194711402|gb|ACF90623.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|195629206|gb|EDX48574.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Newport str. SL317]
gi|197094533|emb|CAR60053.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica
subsp. enterica serovar Paratyphi A str. AKU_12601]
gi|197241631|gb|EDY24251.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA23]
gi|197288314|gb|EDY27695.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. SL480]
gi|197940082|gb|ACH77415.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Dublin str. CT_02021853]
gi|199603313|gb|EDZ01859.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Virchow str. SL491]
gi|204320808|gb|EDZ06009.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Javiana str. GA_MM04042433]
gi|205271794|emb|CAR36628.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica
subsp. enterica serovar Gallinarum str. 287/91]
gi|205321482|gb|EDZ09321.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Saintpaul str. SARA29]
gi|205326989|gb|EDZ13753.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar 4,[5],12:i:- str. CVM23701]
gi|205340301|gb|EDZ27065.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL486]
gi|205343044|gb|EDZ29808.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Weltevreden str. HI_N05-537]
gi|205347158|gb|EDZ33789.1| peptidoglycan-associated lipoprotein [Salmonella enterica subsp.
enterica serovar Hadar str. RI_05P066]
gi|206707996|emb|CAR32285.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica
subsp. enterica serovar Enteritidis str. P125109]
gi|261246012|emb|CBG23814.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica
subsp. enterica serovar Typhimurium str. D23580]
gi|267992490|gb|ACY87375.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Typhimurium str.
14028S]
gi|301157340|emb|CBW16829.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica
subsp. enterica serovar Typhimurium str. SL1344]
gi|312911776|dbj|BAJ35750.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|320085020|emb|CBY94809.1| Peptidoglycan-associated lipoprotein Flags: Precursor [Salmonella
enterica subsp. enterica serovar Weltevreden str.
2007-60-3289-1]
gi|321226328|gb|EFX51379.1| 18K peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Typhimurium str.
TN061786]
gi|322615817|gb|EFY12735.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
315996572]
gi|322621376|gb|EFY18232.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-1]
gi|322623633|gb|EFY20471.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-3]
gi|322628905|gb|EFY25686.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-4]
gi|322634885|gb|EFY31615.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-1]
gi|322636587|gb|EFY33291.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-2]
gi|322647828|gb|EFY44308.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322651360|gb|EFY47742.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
OH_2009072675]
gi|322652661|gb|EFY49010.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|322658642|gb|EFY54903.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str. 19N]
gi|322664929|gb|EFY61120.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
81038-01]
gi|322668402|gb|EFY64558.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
MD_MDA09249507]
gi|322670510|gb|EFY66643.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str. 414877]
gi|322675250|gb|EFY71326.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str. 366867]
gi|322679676|gb|EFY75717.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str. 413180]
gi|322684848|gb|EFY80847.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str. 446600]
gi|322713794|gb|EFZ05365.1| peptidoglycan-associated lipoprotein precursor [Salmonella enterica
subsp. enterica serovar Choleraesuis str. A50]
gi|323191723|gb|EFZ76976.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
609458-1]
gi|323200617|gb|EFZ85692.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
556150-1]
gi|323202288|gb|EFZ87336.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str. 609460]
gi|323205443|gb|EFZ90409.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
507440-20]
gi|323212129|gb|EFZ96954.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str. 556152]
gi|323216148|gb|EGA00877.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB101509-0077]
gi|323221361|gb|EGA05780.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB102109-0047]
gi|323226784|gb|EGA10975.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB110209-0055]
gi|323230998|gb|EGA15114.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB111609-0052]
gi|323234169|gb|EGA18258.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009083312]
gi|323238136|gb|EGA22194.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009085258]
gi|323243571|gb|EGA27589.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
315731156]
gi|323247404|gb|EGA31363.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2009159199]
gi|323251393|gb|EGA35265.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008282]
gi|323256484|gb|EGA40216.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008283]
gi|323260623|gb|EGA44232.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008284]
gi|323264694|gb|EGA48196.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008285]
gi|323270958|gb|EGA54393.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008287]
gi|332987686|gb|AEF06669.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Typhimurium str. UK-1]
Length = 174
Score = 78.3 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 54/173 (31%), Positives = 79/173 (45%), Gaps = 21/173 (12%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDT----------------VLNESSL 40
MQ + + I L + + + S N S E +
Sbjct: 1 MQLNKVLKGLMIALPVMAIAACSSNKNASNDGSEGGMLNGAGTGMDANGNGNMSSEEQAR 60
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSI 99
+ + V+FD Y IR +L ++L + +EGHADE G+ +I
Sbjct: 61 LQMQQLQQNNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADERGTPEYNI 120
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+LG RRA AV Y +G+SA ++ + SYGKE P+V GHDE AYAKNRRA++
Sbjct: 121 SLGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYAKNRRAVLV 173
>gi|254496226|ref|ZP_05109120.1| peptidoglycan-associated lipoprotein precursor (19 kDa surface
antigen) (PPL) [Legionella drancourtii LLAP12]
gi|254354531|gb|EET13172.1| peptidoglycan-associated lipoprotein precursor (19 kDa surface
antigen) (PPL) [Legionella drancourtii LLAP12]
Length = 175
Score = 78.3 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 41/175 (23%), Positives = 74/175 (42%), Gaps = 18/175 (10%)
Query: 1 MQYSTIF-IILSAITMMSISGIDNLDTKISSPDTVLNESSLQ--------------EQFS 45
M+ + + L A +++ ++ +S Q E ++
Sbjct: 1 MKAGSFCKLGLLAASVLFVAACSKAPGSADGAGISDAGASAQGLGQFTHFSGQEPGESYT 60
Query: 46 SSVGDS--VFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALG 102
+ + F ++ P + ++ +L+ H L+ GH DE GSR ++ALG
Sbjct: 61 TQAPHNQLYLFSYDDSNLNPKYLPSVNAQAEYLKSHAGARVLVAGHTDERGSREYNVALG 120
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
RRA V + G+S ++++ SYGKE P GHDE ++ +NRR + R
Sbjct: 121 ERRANTVADILRMAGVSRQQIRIVSYGKERPINLGHDEASHLQNRRVEFTYEATR 175
>gi|255624443|ref|XP_002540477.1| Inner membrane lipoprotein yiaD precursor, putative [Ricinus
communis]
gi|223495460|gb|EEF21906.1| Inner membrane lipoprotein yiaD precursor, putative [Ricinus
communis]
Length = 225
Score = 78.3 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 50/134 (37%), Gaps = 2/134 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHD 80
+ + L ++ D V F+ + ++ L L ++
Sbjct: 83 QAKNAALQQQLADLQAKQTDRGLIITLND-VLFNVDRAELSAEGMRTAQKLADVLLQEPQ 141
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
L+EG D G+ + ++ L RRA AV N + G+ +++ YG+ P D
Sbjct: 142 SVVLVEGFTDSTGTSSHNLDLSQRRAEAVRNALIGLGVPGNKIATRGYGEAYPVASNADA 201
Query: 141 DAYAKNRRAIVFLK 154
+ NRR + L
Sbjct: 202 GSRQLNRRVEIVLS 215
>gi|71906384|ref|YP_283971.1| flagellar motor protein MotD [Dechloromonas aromatica RCB]
gi|71846005|gb|AAZ45501.1| OmpA/MotB [Dechloromonas aromatica RCB]
Length = 257
Score = 78.3 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 52/147 (35%), Gaps = 4/147 (2%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
M +++G + + + + DS+ F ++ A I + +
Sbjct: 100 MKNMAGDIMQALQPLVAQGKVRLLETSRGVTIEINDSILFPAGQAKLQSASISAMLAIAQ 159
Query: 75 WLEKHDCDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
L D IEGH D + S+ L RA V F G+ A R+ YG+
Sbjct: 160 VLAASDFPITIEGHTDNVPIATAQFPSNWELSAMRATTVLRLFNDGGVGAERLTAIGYGE 219
Query: 131 EMPSVYGHDEDAYAKNRRAIVFLKGCR 157
P + A+NRR + + R
Sbjct: 220 TRPLETNTTVEGRARNRRVSILIDSNR 246
>gi|34495565|ref|NP_899780.1| peptidoglycan-associated lipoprotein [Chromobacterium violaceum
ATCC 12472]
gi|34101420|gb|AAQ57789.1| peptidoglycan-associated lipoprotein [Chromobacterium violaceum
ATCC 12472]
Length = 172
Score = 78.3 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 1/145 (0%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS 70
A + T S + V + L + S SV+F S ++ ++
Sbjct: 28 PAAPVTQAPTTQAPVTSGSEQNQVAMDP-LNDPNSPLAKRSVYFAFDSSAVDGEGKTTVA 86
Query: 71 NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
N +L+ HD +I+G+ D GSR ++ALG RRA +V + G+ S+++ S+GK
Sbjct: 87 NHADYLKGHDKKVIIQGNTDARGSREYNLALGQRRAESVKHAMEVLGVKESQLEAVSFGK 146
Query: 131 EMPSVYGHDEDAYAKNRRAIVFLKG 155
E P GH + YA+NRRA + +G
Sbjct: 147 EKPKATGHSDADYAENRRADIVYQG 171
>gi|113969010|ref|YP_732803.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-4]
gi|113883694|gb|ABI37746.1| OmpA/MotB domain protein [Shewanella sp. MR-4]
Length = 230
Score = 78.3 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 59/134 (44%), Gaps = 1/134 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH- 79
+ + T ++ + + ++ + V F + +VL+++ +++
Sbjct: 92 VQETKLRQQLASTGVSVTRDGDNIILNMPNEVTFGVDQTELSDGAKRVLNSVALVAKEYS 151
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ G+ D GS + ++ L RA V NY +++G++++R+K G+ P +
Sbjct: 152 KTQLNVLGYTDSSGSDSYNLRLSQVRASEVGNYLMSKGVASARVKSKGMGEASPIASNAN 211
Query: 140 EDAYAKNRRAIVFL 153
A+NRR + L
Sbjct: 212 AAGRAQNRRVEIVL 225
>gi|134294581|ref|YP_001118316.1| OmpA/MotB domain-containing protein [Burkholderia vietnamiensis G4]
gi|134137738|gb|ABO53481.1| OmpA/MotB domain protein [Burkholderia vietnamiensis G4]
Length = 319
Score = 78.3 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++ F+T S ++ P Q+L + + + + I GH D G+R S+IAL RA
Sbjct: 212 NRTIEFETGSATLTPQGKQILDQMAAALAKMQNRTVDIIGHTDNSGNRTSNIALSQARAD 271
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV Y + +GI +M T G + P D A+NRR +
Sbjct: 272 AVKGYLITKGIQPQQMTTTGVGPDQPIAPNDTADGRARNRRIEFRV 317
>gi|78062443|ref|YP_372351.1| hypothetical protein Bcep18194_B1593 [Burkholderia sp. 383]
gi|77970328|gb|ABB11707.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
Length = 440
Score = 78.3 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 44/131 (33%), Gaps = 4/131 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ +++ ++ + F + S S+ + VL+ + L K + +
Sbjct: 292 EPEIAAGLVSVRDDADRSVIVLRGDGLFKSGSTSVIDRYVPVLARVADALNKVPGNVRVT 351
Query: 87 GHADELGSRN----SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
G+ D+ S+ L RA AV AR R+ G P
Sbjct: 352 GYTDDTPVHTARFASNWDLSRERAEAVRGMIAARLDHPERLAAEGRGTLDPVAPNDSPAN 411
Query: 143 YAKNRRAIVFL 153
A NRR + L
Sbjct: 412 RALNRRVEITL 422
>gi|91226490|ref|ZP_01261239.1| putative lipoprotein [Vibrio alginolyticus 12G01]
gi|91189122|gb|EAS75403.1| putative lipoprotein [Vibrio alginolyticus 12G01]
Length = 219
Score = 78.3 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
V + + Q + + + F +SSY + + L + +E D +I+G+ D
Sbjct: 93 SGVQVQRVGENQLLLRMENGIGFSSSSYQLDASIHNTLRGVARILVEYPDTSLVIDGYTD 152
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + + L RRA +V + V++ ++ R YG+ P + A NRR
Sbjct: 153 STGSESYNQTLSERRAESVRQFLVSQNVAPGRAIARGYGERNPICSNQTSEGRACNRRVE 212
Query: 151 VFL 153
+ +
Sbjct: 213 IQI 215
>gi|332701239|ref|ZP_08421327.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay]
gi|332551388|gb|EGJ48432.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay]
Length = 282
Score = 78.3 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 58/130 (44%), Gaps = 3/130 (2%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTS--SYSIRPADIQVLSNLGSWLEKHD-CD 82
+ + L + E+ +++ + +I+P ++ + ++++
Sbjct: 151 VSDMAQEVALGSLEMYEKLEQDGRLALYINFDTGKSTIKPESRTIVDEIAKMMQENAGLK 210
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
+EGH D G S+ L RA AV +A+GISASR+K +G+ P +E+
Sbjct: 211 IKVEGHTDNQGGAESNQKLSEARAKAVVEAILAKGISASRLKPAGHGQTKPIADNKNEEG 270
Query: 143 YAKNRRAIVF 152
AKNRR +
Sbjct: 271 RAKNRRVELV 280
>gi|284035576|ref|YP_003385506.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
gi|283814869|gb|ADB36707.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
Length = 306
Score = 78.3 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 28/145 (19%), Positives = 53/145 (36%), Gaps = 2/145 (1%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG-DSVFFDTSSYSIRPADIQVL 69
A+ ++ + + K V + + ++ F S + P L
Sbjct: 159 PAVKTVAANSERVVPPKTLDAKVVYTPPLVVAPVGKTTQLQALQFVQSKTELLPDAQPAL 218
Query: 70 SNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L +++ + + GH D G + ++ L +R + Y V GI ASR+ Y
Sbjct: 219 EQLLQFMQSQPTAEIELSGHTDNQGDFDQNLLLSKQRVEVIKAYLVKNGIPASRITTRGY 278
Query: 129 GKEMPSVYGHDEDAYAKNRRAIVFL 153
G P + E +NRR + +
Sbjct: 279 GPTRPIASNNSETTRQQNRRVEMIV 303
>gi|148266343|ref|YP_001233049.1| OmpA/MotB domain-containing protein [Geobacter uraniireducens Rf4]
gi|146399843|gb|ABQ28476.1| OmpA/MotB domain protein [Geobacter uraniireducens Rf4]
Length = 454
Score = 78.3 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 2/124 (1%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHAD 90
+ V ++ + + FD IRP ++ +G +++K+ IEGH D
Sbjct: 201 EPVPAAEPTPGRYKYCITLHIEFDIDKADIRPEYHDEVAKVGDFMKKYPTTTTVIEGHTD 260
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
+G+ ++ L RRA +V NY V + + R+ YG P + NRR
Sbjct: 261 NVGTAEYNMGLSQRRAESVVNYLVEKFGIENSRLSAKGYGLTRPVADNSTNEGKQLNRRI 320
Query: 150 IVFL 153
+
Sbjct: 321 EAII 324
Score = 66.8 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAV 109
V FDT I+P + ++ +G +++K+ IEGH D +G ++ L RA V
Sbjct: 344 QVEFDTGKADIKPQYREEIAKVGDYMKKYPTTTAAIEGHTDNVGGSEYNMKLSQERAENV 403
Query: 110 FNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
NY V I SR+ YG Y + + KNRR +
Sbjct: 404 VNYLVENFGIERSRLSAKGYGFTRRIAYNNTAEGRQKNRRINAVI 448
>gi|254973922|ref|ZP_05270394.1| chemotaxis protein [Clostridium difficile QCD-66c26]
gi|255091309|ref|ZP_05320787.1| chemotaxis protein [Clostridium difficile CIP 107932]
gi|255312966|ref|ZP_05354549.1| chemotaxis protein [Clostridium difficile QCD-76w55]
gi|255515725|ref|ZP_05383401.1| chemotaxis protein [Clostridium difficile QCD-97b34]
gi|255648819|ref|ZP_05395721.1| chemotaxis protein [Clostridium difficile QCD-37x79]
gi|260682038|ref|YP_003213323.1| chemotaxis protein [Clostridium difficile CD196]
gi|260685636|ref|YP_003216769.1| chemotaxis protein [Clostridium difficile R20291]
gi|306518934|ref|ZP_07405281.1| chemotaxis protein [Clostridium difficile QCD-32g58]
gi|260208201|emb|CBA60548.1| chemotaxis protein [Clostridium difficile CD196]
gi|260211652|emb|CBE01912.1| chemotaxis protein [Clostridium difficile R20291]
Length = 231
Score = 78.3 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 47/127 (37%), Gaps = 5/127 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ + DS+ FD+ ++ L+ + ++ +IEGH D
Sbjct: 102 QNSVTVKDDSRGILLELDDSILFDSGISELKADSKATLNKVYDMIKMMKNKIVIEGHTDN 161
Query: 92 LG----SRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKN 146
+ + S+ L RA +V YFV R+ T G+ P V A+N
Sbjct: 162 VPVKSSTHESNWDLSSSRAVSVVRYFVEEKGMDPRLFSATGCGEYQPLVSNETAKGRAEN 221
Query: 147 RRAIVFL 153
RR + +
Sbjct: 222 RRVNILI 228
>gi|89902522|ref|YP_524993.1| Type I secretion outer membrane protein TolC [Rhodoferax
ferrireducens T118]
gi|89347259|gb|ABD71462.1| Type I secretion outer membrane protein, TolC [Rhodoferax
ferrireducens T118]
Length = 609
Score = 78.3 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 1/125 (0%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-E 86
S V S+ FD+ +++ ++ L +L + ++ D +I
Sbjct: 475 PSRARAVAPVVQKPAPTKVSLSADTLFDSGKSNLKAEGLRSLDSLLARIKGVQLDVVIAV 534
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
GH D +GS + L L RA +V Y V +G+ R++ G+ P E +AKN
Sbjct: 535 GHTDSVGSEEFNNRLSLARAESVRAYLVGKGVDVKRVRAVGKGESQPIADNATEAGHAKN 594
Query: 147 RRAIV 151
RR V
Sbjct: 595 RRVDV 599
>gi|331016979|gb|EGH97035.1| flagellar motor protein MotD [Pseudomonas syringae pv. lachrymans
str. M302278PT]
Length = 295
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 19/127 (14%), Positives = 44/127 (34%), Gaps = 4/127 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ + + S+ F + ++ + +++ D +EG D+
Sbjct: 118 SDQMTVRGNELWIEIELNSSLLFFSGDAMPSDKAFTIIEKVSGIVKRFDNPIHVEGFTDD 177
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
++ L R+ ++ GI+ +R+ YG+ P AKNR
Sbjct: 178 QPISTAQFPTNWELSSARSASIVRMLAMDGINPARLASVGYGEFQPIAPNTTAAGRAKNR 237
Query: 148 RAIVFLK 154
R ++ +
Sbjct: 238 RVVLVIS 244
>gi|107100485|ref|ZP_01364403.1| hypothetical protein PaerPA_01001510 [Pseudomonas aeruginosa PACS2]
Length = 188
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 3/110 (2%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNSSIALGLRR 105
V + F S + AD + L+ + L+ I GH D +GS + L RR
Sbjct: 77 VVRDLHFAFDSSKVDAADSEKLNGIAERLKGEAASTRLSITGHTDSVGSDAYNQKLSERR 136
Query: 106 AYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
A AV NY + G+ +S + V G+ P + A+NRR + +K
Sbjct: 137 ANAVANYLIDAGVPSSIIVGVQGLGESQPVADNKTREGRAENRRVEILIK 186
>gi|328553736|gb|AEB24228.1| flagellar motor protein MotB [Bacillus amyloliquefaciens TA208]
Length = 265
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 51/135 (37%), Gaps = 6/135 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+ L +E ++ DS+FFD+ IR DI + + + + + +I GH D
Sbjct: 127 EHQLETKLTKEGLLITIKDSIFFDSGQAVIRQEDIPLAKEISNLLVLNPPRNIIISGHTD 186
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ S+ L + RA A +G+ P+ + +K
Sbjct: 187 NVPIKNSQFQSNWHLSVMRAVNFMAILTENPKLDAKVFSAKGFGEYKPAASNKTAEGRSK 246
Query: 146 NRRAIVFLKGCRANT 160
NRR V ++ A T
Sbjct: 247 NRRVEVLIQPRNAAT 261
>gi|283833962|ref|ZP_06353703.1| peptidoglycan-associated lipoprotein [Citrobacter youngae ATCC
29220]
gi|291070093|gb|EFE08202.1| peptidoglycan-associated lipoprotein [Citrobacter youngae ATCC
29220]
Length = 172
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 54/171 (31%), Positives = 81/171 (47%), Gaps = 19/171 (11%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKIS--------------SPDTVLNESSLQE 42
MQ + + I L + + + S N S S + E + +
Sbjct: 1 MQLNKVLKGLMIALPVMAIAACSSNKNASNDGSEGMLGAGTGMDANGSGNMSSEEQARLQ 60
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIAL 101
+ V+FD Y IR +L ++L + +EGHADE G+ +I+L
Sbjct: 61 MQQLQQNNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADERGTPEYNISL 120
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
G RRA AV Y +G+SA ++ + SYGKE P+V GHDE AY+KNRRA++
Sbjct: 121 GERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYSKNRRAVLV 171
>gi|58040120|ref|YP_192084.1| peptidoglycan-associated lipoprotein [Gluconobacter oxydans 621H]
gi|58002534|gb|AAW61428.1| Peptidoglycan-associated lipoprotein [Gluconobacter oxydans 621H]
Length = 159
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 5/159 (3%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNE----SSLQEQFSSSVGDSVFFDT 56
M++ + A+ + + S + + V E + ++VGD VF++
Sbjct: 1 MKFKVFGALGLALVLAACSNGNTNKGDSTGAGAVAQEAGPTPGSEADLVANVGDRVFYEL 60
Query: 57 SSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA 115
+ + L +W + + G+ D+ G+ +IALG RRA A +Y VA
Sbjct: 61 NQSQLSEEARATLDKQVAWLAKYPQVSIQVAGNCDDRGTEEYNIALGQRRANAARDYLVA 120
Query: 116 RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+G+SASR+ SYGK+ P+ G DE ++A+NR AI ++
Sbjct: 121 KGVSASRITTISYGKDRPTADGDDEQSWAQNRNAITSVR 159
>gi|322806477|emb|CBZ04046.1| flagellar motor rotation protein MotB [Clostridium botulinum H04402
065]
Length = 254
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 47/118 (39%), Gaps = 5/118 (4%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RN 96
+ + D V F++ + +L+ + L+ D + + GH D
Sbjct: 117 ADGLEIDIQDVVLFNSGDAEVLKQSSALLTQISKMLKGLDNNIKVTGHTDNQPISNSKFR 176
Query: 97 SSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA V N+ G +++ + +YG+ MP E AKNRR + +
Sbjct: 177 SNWDLSAIRAINVMNFLSNIGGIPANKLSIQAYGEYMPKFDNATEAGRAKNRRVEISI 234
>gi|313204239|ref|YP_004042896.1| ompa/motb domain protein [Paludibacter propionicigenes WB4]
gi|312443555|gb|ADQ79911.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4]
Length = 410
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 6/146 (4%)
Query: 15 MMSISGIDNLDTKISSPD----TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS 70
+ + + D D S+ Q + +V V F+ S + +L
Sbjct: 264 LQAANAERAADKAKLQADLKDIPQAKVSADSNQDALTVLLDVNFEFGSSELSSRSRAILD 323
Query: 71 NLGSWLEKH--DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
++ L+ + LI GH D +G ++ L RA V Y +++GISAS + V +
Sbjct: 324 DVALVLKVNKAWSKLLISGHTDNIGGDKANKKLSEERAAGVKKYLISKGISASVIDVAGF 383
Query: 129 GKEMPSVYGHDEDAYAKNRRAIVFLK 154
GKE P ++ KNRRA + ++
Sbjct: 384 GKEKPKTTNETKEGRYKNRRAELVIE 409
>gi|311067881|ref|YP_003972804.1| flagellar motor protein MotB [Bacillus atrophaeus 1942]
gi|310868398|gb|ADP31873.1| flagellar motor protein MotB [Bacillus atrophaeus 1942]
Length = 262
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 47/128 (36%), Gaps = 6/128 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+ L E ++ DS+FFD+ +IR DI + + + + +I GH D
Sbjct: 123 ENQLETKLTDEGLLITIKDSIFFDSGKATIREQDIPLAEEISDLLVLNPPRNIIISGHTD 182
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ S+ L + RA + A +G+ P + +K
Sbjct: 183 NMPIKNSQFQSNWHLSVMRAVNFMGLLIENPKLDAKVFSAKGFGEYKPVATNDTAEGRSK 242
Query: 146 NRRAIVFL 153
NRR V +
Sbjct: 243 NRRVEVLI 250
>gi|317049504|ref|YP_004117152.1| OmpA/MotB domain-containing protein [Pantoea sp. At-9b]
gi|316951121|gb|ADU70596.1| OmpA/MotB domain protein [Pantoea sp. At-9b]
Length = 157
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 56/155 (36%), Gaps = 3/155 (1%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ F++L I + + + S E + + D + F +
Sbjct: 1 MK-IKAFLLLCIIACVGCQSKRTFTDEQIAAMRQEGFSPNAEGWGLGMSDKILFGINESE 59
Query: 61 IRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
+ P ++ + + L I+GH D G+ + + L L+RA AV +
Sbjct: 60 LTPESKTTINRMATNLAATGIEHLRIDGHTDNYGTDSYNEQLSLKRANAVAAQWAEGASL 119
Query: 120 AS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ GK+ P + A+NRR V +
Sbjct: 120 PRSNIETRGLGKKYPVTSNNSAQGRAQNRRVAVVI 154
>gi|161504616|ref|YP_001571728.1| hypothetical protein SARI_02730 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160865963|gb|ABX22586.1| hypothetical protein SARI_02730 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 574
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 50/134 (37%), Gaps = 2/134 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHD 80
D P + + +Q + + FD+ +++ ++L N L K
Sbjct: 413 AVSDWAPPPPPPPVIKKIIQGPKTLRLDSMSLFDSGKSALKAGSTRMLVNSLVGIKAKPG 472
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHD 139
++ GH D G+ + L L+RA AV N+ G V YG+ P
Sbjct: 473 WLIVVSGHTDNTGNPKLNQTLSLKRAEAVRNWMRDTGDVPESCFAVQGYGESRPIATNDT 532
Query: 140 EDAYAKNRRAIVFL 153
+ A NRR + L
Sbjct: 533 PEGRALNRRVEISL 546
>gi|119775220|ref|YP_927960.1| peptidoglycan-associated lipoprotein [Shewanella amazonensis SB2B]
gi|119767720|gb|ABM00291.1| peptidoglycan-associated lipoprotein [Shewanella amazonensis SB2B]
Length = 178
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 21/171 (12%)
Query: 3 YSTIFIILSAITMMSISGIDNL--------------------DTKISSPDTVLNESSLQE 42
T+ I+ + + + S D+ +T S E +
Sbjct: 7 LKTMLIVAPIMALSACSSTDSATDASGSSSSLGGSGSSMGGVETGSVSGMLTPEEQMRMK 66
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIAL 101
Q + ++FD + P +L G++L E LIEGH+DE G+ +IAL
Sbjct: 67 QEELRRENVIYFDFDRSEVSPLSADILLAHGNYLLENPSVRILIEGHSDERGTPEYNIAL 126
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
G RRA AV Y A G+ ++M + SYG+E P ++ ++KNRRA++
Sbjct: 127 GERRAKAVAKYLQAMGVQPAQMSIVSYGEEKPQDLTRTDEGFSKNRRAVLV 177
>gi|254564208|ref|YP_003071303.1| Outer membrane lipoprotein omp16 [Methylobacterium extorquens DM4]
gi|254271486|emb|CAX27501.1| Outer membrane lipoprotein omp16 precursor [Methylobacterium
extorquens DM4]
Length = 170
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 49/121 (40%), Positives = 68/121 (56%), Gaps = 1/121 (0%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSS 98
+ F ++GD VFF++ S + P L SW FLIEGHADE G+R +
Sbjct: 50 SAQDFVVNIGDRVFFESDSTDLTPTATATLDKQASWLQRYPRYSFLIEGHADERGTREYN 109
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
+LG RRA V +Y +RGISASRM+ SYGKE P +D +++NRR++ L G
Sbjct: 110 YSLGARRAQTVQDYLASRGISASRMRTVSYGKERPVAVCNDISCWSQNRRSVSVLDGGAG 169
Query: 159 N 159
+
Sbjct: 170 S 170
>gi|167586272|ref|ZP_02378660.1| peptidoglycan-associated lipoprotein [Burkholderia ubonensis Bu]
Length = 169
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 14/166 (8%)
Query: 1 MQYSTIFIILSAITMMSISGIDNL------------DTKISSPDTV-LNESSLQEQFSSS 47
M + + L+ + + +++ + T+ + + + L + S
Sbjct: 1 MMSKKVRLALAVMMVGALAACKSGVKLDEKANAGAMSTQPNPENVAQVTVDPLNDPNSPL 60
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRA 106
S++FD SYS++ ++ +L+ H LI+G+ DE G+ ++ALG +RA
Sbjct: 61 AKRSIYFDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVLIQGNTDERGTSEYNLALGQKRA 120
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
AV G++ S+M+ S GKE P GHDE ++A+NRR+ +
Sbjct: 121 EAVRRAMALLGVADSQMEAVSLGKEKPQAAGHDEASWAQNRRSDLV 166
>gi|146329067|ref|YP_001209253.1| OmpA family protein [Dichelobacter nodosus VCS1703A]
gi|146232537|gb|ABQ13515.1| OmpA family protein [Dichelobacter nodosus VCS1703A]
Length = 298
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 40/101 (39%), Gaps = 2/101 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
+ FD + ++ + + + + + +EGH D S +I L RR AV
Sbjct: 192 KILFDNDKHFVKQQYYSEIETVAGYLRQYPNTTVTLEGHTDSNASEQYNINLSQRRVNAV 251
Query: 110 FNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
+ + IS +R+ YG+ P + +NRR
Sbjct: 252 RDVLIQHYGISPARISAVGYGESQPIASNNTAAGRQQNRRV 292
>gi|218516473|ref|ZP_03513313.1| outer membrane peptidoglycan-associated lipoprotein [Rhizobium etli
8C-3]
Length = 170
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 50/121 (41%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
+ F+ +VGD +FFDT S SIR Q L W + +EGHADE G+R
Sbjct: 48 TPGSAQDFTVNVGDRIFFDTDSSSIRADASQTLDRQAQWLARYPNYQITVEGHADERGTR 107
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
++ALG RRA A +Y +RG+ A RMK SYGKE P D +++NRRA+ L G
Sbjct: 108 EYNLALGARRAAAAKDYLASRGVPAQRMKTISYGKERPVAVCDDISCWSQNRRAVTVLGG 167
Query: 156 C 156
Sbjct: 168 A 168
>gi|163738854|ref|ZP_02146267.1| OmpA/MotB [Phaeobacter gallaeciensis BS107]
gi|163741898|ref|ZP_02149288.1| OmpA domain protein [Phaeobacter gallaeciensis 2.10]
gi|161385071|gb|EDQ09450.1| OmpA domain protein [Phaeobacter gallaeciensis 2.10]
gi|161387659|gb|EDQ12015.1| OmpA/MotB [Phaeobacter gallaeciensis BS107]
Length = 636
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 39/125 (31%), Gaps = 1/125 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGH 88
+ + E E + + F+ S ++ L + I+GH
Sbjct: 475 ADKPMSPELCEAELAAVQTVSKITFEPGSATVAAGSRDTLDQIADILARCDGVRLEIQGH 534
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D G + L RA +V N R + S YG+ P ED NRR
Sbjct: 535 TDSQGREEMNQTLSQSRAQSVLNELRGRRLVTSSFTAKGYGESTPIASNDTEDGREANRR 594
Query: 149 AIVFL 153
L
Sbjct: 595 IEFRL 599
>gi|157374997|ref|YP_001473597.1| OmpA domain-containing protein [Shewanella sediminis HAW-EB3]
gi|157317371|gb|ABV36469.1| OmpA domain protein [Shewanella sediminis HAW-EB3]
Length = 179
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 49/178 (27%), Positives = 77/178 (43%), Gaps = 26/178 (14%)
Query: 1 MQYSTIF---------IILSAITMMSISGIDN----------------LDTKISSPDTVL 35
M + +F + +SA + S S D ++T +P
Sbjct: 1 MDLNKLFKAMLVALPIMAISACSSTSESETDATSSTSGSGSELSTGSGVETGGVAPILTP 60
Query: 36 NESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGS 94
E + ++FD S+ +VL G++ +E + +IEGHADE G+
Sbjct: 61 EEQQRLKYQELRKEHVIYFDFDRSSVSMQFAEVLQAHGNYLVEHPNVRLMIEGHADERGT 120
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+IALG RRA AV Y G+ S+M + SYG+E P +D +A NRRA++
Sbjct: 121 PEYNIALGERRAKAVAKYLQGMGVLPSQMSIVSYGEEKPLDMSRTDDGFAINRRAVLV 178
>gi|91776302|ref|YP_546058.1| OmpA/MotB [Methylobacillus flagellatus KT]
gi|91710289|gb|ABE50217.1| OmpA/MotB [Methylobacillus flagellatus KT]
Length = 267
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 42/115 (36%), Gaps = 4/115 (3%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSS 98
+ D V F S +I+ +S + L +EGH D + S+
Sbjct: 138 GVRIDIADGVLFQAGSAAIKAEADAPISEITQILADQQYAIQVEGHTDNVPISNAQFPSN 197
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V + GI A+R+ Y P + A+NRR + +
Sbjct: 198 WELSSMRATSVVRKMIENGIDAARLSAVGYSDTQPIADNQTAEGRAQNRRVSIMV 252
>gi|83644388|ref|YP_432823.1| outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hahella chejuensis KCTC 2396]
gi|83632431|gb|ABC28398.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hahella chejuensis KCTC 2396]
Length = 219
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 28/113 (24%), Positives = 55/113 (48%), Gaps = 1/113 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADELGSRNSSIA 100
++ + + ++ FDT ++ L ++G L++ D + + GH D GS + +
Sbjct: 102 DEITLVMPGNITFDTGRAEVKANFYDTLDSVGLVLKEFDKTIIQVSGHTDSTGSLDLNQR 161
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L +RA +V Y +++G+ +SR++ YG P + A NRR + L
Sbjct: 162 LSEQRAGSVGRYLISQGVLSSRVQTIGYGPRYPVATNSTTEGRAANRRVELKL 214
>gi|52421234|ref|YP_087146.1| putative outer membrane protein [Bacteroides fragilis YCH46]
gi|52218755|dbj|BAD51347.1| putative outer membrane protein [Bacteroides fragilis YCH46]
Length = 212
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 1/123 (0%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADE 91
T +++ EQ + + + F+ S+ + +L+ L E + I GH D
Sbjct: 85 TTYKDANGVEQIKAIAQNDILFNFDSFELSSQAQTMLNQLCVVINEIPNTKVNIIGHTDN 144
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+G +N ++ L RA +V NY + G+ + G P E AKNRR +
Sbjct: 145 VGDKNYNMVLSKNRALSVGNYMRSSGVDGDNITEDGKGLSSPIADNKTESGRAKNRRVEI 204
Query: 152 FLK 154
++
Sbjct: 205 YIS 207
>gi|89073281|ref|ZP_01159811.1| hypothetical outer membrane protein OmpA [Photobacterium sp. SKA34]
gi|89050991|gb|EAR56455.1| hypothetical outer membrane protein OmpA [Photobacterium sp. SKA34]
Length = 326
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 48/129 (37%), Gaps = 2/129 (1%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFL 84
+N + + + +V F S +I D L+ L++ D
Sbjct: 183 PATVEIKETINVNQVTIVTLEELRLTVPFAFDSSTITTDDAAKLAPFEQRLKEQDTAKIY 242
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAY 143
+ GH D GS + + L +RA AV + +SR+ G+ P ED
Sbjct: 243 VVGHTDSRGSESYNQTLSEKRAEAVADTLRQHLNLDSSRIIAQGRGESDPVASNQTEDGR 302
Query: 144 AKNRRAIVF 152
++NRR +
Sbjct: 303 SQNRRVDII 311
>gi|13472168|ref|NP_103735.1| hypothetical protein mll2374 [Mesorhizobium loti MAFF303099]
gi|14022913|dbj|BAB49521.1| mll2374 [Mesorhizobium loti MAFF303099]
Length = 366
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 53/143 (37%), Gaps = 2/143 (1%)
Query: 11 SAITMMSISGIDNLDTKISSPDTV-LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVL 69
+A+ ++ + +E L S +++F +S + +L
Sbjct: 217 AAVQTVAAGTTGVGPVATDAAKANFSDEECLNRFAVLSRTGAIYFRPASARLDAKSRPLL 276
Query: 70 SNL-GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
+ + G + + G+ D GS ++ AL RRA AV VA G+ ++ +
Sbjct: 277 TEVEGVVGKCPTLKVEVSGYTDSDGSPEANKALSERRAQAVAEALVAGGVPRQQISAAGH 336
Query: 129 GKEMPSVYGHDEDAYAKNRRAIV 151
G+E P A NRR
Sbjct: 337 GEENPVAANDTPKNKALNRRIEF 359
>gi|86141593|ref|ZP_01060139.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Leeuwenhoekiella blandensis MED217]
gi|85832152|gb|EAQ50607.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Leeuwenhoekiella blandensis MED217]
Length = 224
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 3/135 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDS--VFFDTSSYSIRPADIQVLSNLGSWLEKH 79
D +I + + + ++ V+F T+ Y+I A + L+ L ++++
Sbjct: 73 DKQAQRIEEEIPGAEVERVDDGIVVNFDENSGVYFATNKYNINSASQETLNGLSRVMQEY 132
Query: 80 -DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ L+ GH D GS + ++ L RA AV NY V++GI++ R YG+E P
Sbjct: 133 PQTNVLVVGHTDSTGSADYNMTLSKNRAQAVTNYLVSQGIASGRFTTQWYGEEQPKYTNE 192
Query: 139 DEDAYAKNRRAIVFL 153
+ +KNRR + +
Sbjct: 193 TAEGRSKNRRVTLAI 207
>gi|107028365|ref|YP_625460.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
gi|116686361|ref|YP_839608.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
HI2424]
gi|105897529|gb|ABF80487.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
gi|116652076|gb|ABK12715.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424]
Length = 220
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLR 104
S+ +F T S + PA L L + ++H ++G+ D GS + AL R
Sbjct: 110 VSLTGDAYFATDSAVLTPAATAALDTLLNRQADRHFARVEVDGYTDATGSDAHNQALSKR 169
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RA AV Y G+ A +G+ P+ + A+NRR + L+
Sbjct: 170 RADAVAGYLREHGLKADSFAAAGHGEANPAASNDTAEGRARNRRVEISLQ 219
>gi|331641242|ref|ZP_08342377.1| peptidoglycan-associated lipoprotein [Escherichia coli H736]
gi|331651749|ref|ZP_08352768.1| peptidoglycan-associated lipoprotein [Escherichia coli M718]
gi|331672263|ref|ZP_08373054.1| peptidoglycan-associated lipoprotein [Escherichia coli TA280]
gi|331676423|ref|ZP_08377120.1| peptidoglycan-associated lipoprotein [Escherichia coli H591]
gi|332282410|ref|ZP_08394823.1| peptidoglycan-associated outer membrane lipoprotein [Shigella sp.
D9]
gi|331038040|gb|EGI10260.1| peptidoglycan-associated lipoprotein [Escherichia coli H736]
gi|331050027|gb|EGI22085.1| peptidoglycan-associated lipoprotein [Escherichia coli M718]
gi|331070458|gb|EGI41822.1| peptidoglycan-associated lipoprotein [Escherichia coli TA280]
gi|331075916|gb|EGI47213.1| peptidoglycan-associated lipoprotein [Escherichia coli H591]
gi|332104762|gb|EGJ08108.1| peptidoglycan-associated outer membrane lipoprotein [Shigella sp.
D9]
Length = 181
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 54/172 (31%), Positives = 81/172 (47%), Gaps = 20/172 (11%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSP---------------DTVLNESSLQ 41
MQ + + I L + + + S N S + E +
Sbjct: 9 MQLNKVLKGLMIALPVMAIAACSSNKNASNDGSEGMLGAGTGMDANGGNGNMSSEEQARL 68
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIA 100
+ + V+FD Y IR Q+L ++L + +EGHADE G+ +I+
Sbjct: 69 QMQQLQQNNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADERGTPEYNIS 128
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
LG RRA AV Y +G+SA ++ + SYGKE P+V GHDE AY+KNRRA++
Sbjct: 129 LGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYSKNRRAVLV 180
>gi|329117988|ref|ZP_08246701.1| OmpA family protein [Neisseria bacilliformis ATCC BAA-1200]
gi|327465876|gb|EGF12148.1| OmpA family protein [Neisseria bacilliformis ATCC BAA-1200]
Length = 226
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHA 89
+T ++ +Q + ++V F T S ++ L+ L ++ I GH
Sbjct: 88 ANTGVDVQRSGDQIKLVMPENVTFATGSATLSTNAQNALAAAAQTLTQYPDTTLSINGHT 147
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GS + L RRA AV ++ +RG++ SR+ +G P + A+NRR
Sbjct: 148 DNTGSDAINAPLSQRRAQAVASFLQSRGVNGSRLATYGHGSRQPVASNATAEGRAQNRRV 207
Query: 150 IVFL 153
+ +
Sbjct: 208 EILI 211
>gi|320354327|ref|YP_004195666.1| OmpA/MotB domain-containing protein [Desulfobulbus propionicus DSM
2032]
gi|320122829|gb|ADW18375.1| OmpA/MotB domain protein [Desulfobulbus propionicus DSM 2032]
Length = 248
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 49/131 (37%), Gaps = 4/131 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
V + + +SV FD ++ PA +L + + IEGH D
Sbjct: 104 QAQVEAVQQDNDSIILRIHESVLFDEGQATLNPASYPILRKVADIIRPLPMSMRIEGHTD 163
Query: 91 ELGS---RNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKN 146
S+ L + RA AV +++ + A RM YG P +D AKN
Sbjct: 164 STPMAGATTSNWDLSVARAVAVMSFYHRGELFALDRMSAAGYGDTRPLAPNTTKDNMAKN 223
Query: 147 RRAIVFLKGCR 157
RR L+ R
Sbjct: 224 RRVDFVLRSNR 234
>gi|322507807|gb|ADX03261.1| OmpA/MotB [Acinetobacter baumannii 1656-2]
gi|323517407|gb|ADX91788.1| Outer membrane protein [Acinetobacter baumannii TCDC-AB0715]
Length = 397
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 61/148 (41%), Gaps = 2/148 (1%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG-DSVFFDTSSYSIRPADI 66
++ +A S ++L ++ + + ++ + F + S I +
Sbjct: 248 VVAAAPETAEQSVSNSLSASQTALTAIDPNNVDVNALVKALNLQIINFASGSSDIPADNK 307
Query: 67 QVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
+L + + + GH D G+ ++ AL RRA AV +Y V++G+ AS++
Sbjct: 308 AILDQAATLLNKVSGVKLDVGGHTDSTGNAAANKALSQRRAQAVVDYLVSKGVDASKLVA 367
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+G E P E+ KNRR +
Sbjct: 368 KGHGSEQPVADNTTEEGRFKNRRIEFSV 395
>gi|170769100|ref|ZP_02903553.1| peptidoglycan-associated lipoprotein [Escherichia albertii TW07627]
gi|170122172|gb|EDS91103.1| peptidoglycan-associated lipoprotein [Escherichia albertii TW07627]
Length = 175
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 55/174 (31%), Positives = 81/174 (46%), Gaps = 22/174 (12%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSP-----------------DTVLNESS 39
MQ + + I L + + + S N S + E +
Sbjct: 1 MQLNKVLKGLMIALPVMAIAACSSNKNASNDGSEGMLGAGTGMDANGGNGNGNMSSEEQA 60
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSS 98
+ + V+FD Y IR Q+L ++L + +EGHADE G+ +
Sbjct: 61 RLQMQQLQQNNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADERGTPEYN 120
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
I+LG RRA AV Y +G+SA ++ + SYGKE P+V GHDE AYAKNRRA++
Sbjct: 121 ISLGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYAKNRRAVLV 174
>gi|298486507|ref|ZP_07004567.1| OmpA family protein [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|298158984|gb|EFI00045.1| OmpA family protein [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
Length = 268
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 56/144 (38%), Gaps = 2/144 (1%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
++ + L + ++GD V FD ++ + + + + +
Sbjct: 120 AKLASAQQQGRWLEDQILSLATTETDRGLVMTLGD-VLFDAGHAELKSSASRTILKVVQF 178
Query: 76 LEKHDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
L+ + + IEG+ D G R ++ L RA AV + + G+ R+ V Y ++ P
Sbjct: 179 LQINPRRVVRIEGYTDSTGDRQENLKLSKDRAQAVADVLMDLGVDEKRIHVEGYSQQFPV 238
Query: 135 VYGHDEDAYAKNRRAIVFLKGCRA 158
E A+NRR + +
Sbjct: 239 NANASERGRAQNRRVEIVFSDEKG 262
>gi|262394500|ref|YP_003286354.1| outer membrane protein [Vibrio sp. Ex25]
gi|262338094|gb|ACY51889.1| outer membrane protein [Vibrio sp. Ex25]
Length = 222
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
V + + Q + + + F +SSY + + L + +E D +I+G+ D
Sbjct: 96 SGVQVQRVGENQLLLRMENGIGFSSSSYQLDASIHNTLRGVARILVEYPDTSLVIDGYTD 155
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + + L RRA +V + V++ ++ R YG+ P + A NRR
Sbjct: 156 STGSESYNQTLSERRAESVRQFLVSQNVAPGRAIARGYGERNPICSNQTSEGRACNRRVE 215
Query: 151 VFL 153
+ +
Sbjct: 216 IQI 218
>gi|254457130|ref|ZP_05070558.1| OmpA/MotB [Campylobacterales bacterium GD 1]
gi|207085922|gb|EDZ63206.1| OmpA/MotB [Campylobacterales bacterium GD 1]
Length = 407
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 55/130 (42%), Gaps = 1/130 (0%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDF 83
++K P+T + ++ + + + V F+ +S + + ++ +
Sbjct: 275 NSKDICPNTPIGDAVNSDGCPAKITLHVKFENNSDVVNTSSYDIIEKYADFLNNYSSYSA 334
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
I G+ D GS N + L +RA A+ + + +G+ A R+ G+ P ++
Sbjct: 335 KIIGYTDSKGSANYNQKLSEKRANAIKSMLLEKGVPADRLSSVGMGESNPVADNSTKEGR 394
Query: 144 AKNRRAIVFL 153
A+NRR L
Sbjct: 395 AQNRRIEAEL 404
>gi|304320241|ref|YP_003853884.1| OmpA family protein [Parvularcula bermudensis HTCC2503]
gi|303299143|gb|ADM08742.1| OmpA family protein [Parvularcula bermudensis HTCC2503]
Length = 175
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 42/141 (29%), Positives = 65/141 (46%), Gaps = 1/141 (0%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+ + + +VG+ VFF+ + Y++ I L
Sbjct: 29 ASAPVDAVVPERSARVDQAPEGPIPGSAADLEQNVGNRVFFEYNEYALGQESIATLRRQA 88
Query: 74 SWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
+W++++ +EGHADE G+R ++ALG RRA A +Y V GI SR+ SYGKE
Sbjct: 89 AWMKEYPEARIRLEGHADERGTREYNLALGARRASAAKSYLVDLGIDPSRITTVSYGKER 148
Query: 133 PSVYGHDEDAYAKNRRAIVFL 153
P +A+A+NR A L
Sbjct: 149 PIDPRSTPEAWARNRNATTVL 169
>gi|320106352|ref|YP_004181942.1| OmpA/MotB domain-containing protein [Terriglobus saanensis SP1PR4]
gi|319924873|gb|ADV81948.1| OmpA/MotB domain protein [Terriglobus saanensis SP1PR4]
Length = 284
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 54/133 (40%), Gaps = 3/133 (2%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF 83
K + + ++ S E S+ D+ FF++ S ++R I VL + + L
Sbjct: 129 SPEKRGTAISAVSFRSEPEGLVLSLQDAGFFNSGSAALRADAIPVLERIAASLPMGPLRV 188
Query: 84 LIEGHADELGS--RNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDE 140
+ + S+ L RA A+ +AR ++ + + V Y + P E
Sbjct: 189 EGHTDNVAIHTALYASNWELSTARANAIARVLLARSLVNPASLAVAGYAEFHPISSNSTE 248
Query: 141 DAYAKNRRAIVFL 153
+ AKNRR + L
Sbjct: 249 EGRAKNRRVDIVL 261
>gi|260576643|ref|ZP_05844630.1| peptidoglycan-associated lipoprotein [Rhodobacter sp. SW2]
gi|259021128|gb|EEW24437.1| peptidoglycan-associated lipoprotein [Rhodobacter sp. SW2]
Length = 177
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 47/121 (38%), Positives = 70/121 (57%), Gaps = 1/121 (0%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELG 93
++ + F+ ++GD VFF ++ L+ WL + +IEGHADE G
Sbjct: 52 ASDPASVAYFNQTLGDRVFFAVDQSNLSDQARATLAGQAQWLNTNRDYAIIIEGHADEQG 111
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+R ++ALG RRA AV NY +++G++ASRM+ SYGKE P ED Y++NRRA+ L
Sbjct: 112 TREYNLALGARRASAVQNYLISQGVTASRMRTVSYGKERPIEVCSTEDCYSRNRRAVTVL 171
Query: 154 K 154
Sbjct: 172 S 172
>gi|303245612|ref|ZP_07331895.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ]
gi|302492875|gb|EFL52740.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ]
Length = 345
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 6/153 (3%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLN---ESSLQEQFSSSVG--DSVFFDTSSYSIRP 63
+L AI M L ++ + E +L E + S++FD Y+I+P
Sbjct: 192 VLKAIAAMGKCNCIELGEELLRNEAARERFLECALYEWIEDEIVVFRSIYFDFDKYNIKP 251
Query: 64 ADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASR 122
+ VL K ++EG+ D +G+ ++ LG RRA +V +FV +GI ASR
Sbjct: 252 EFVPVLEEGTAIIKSKPTMKVILEGNTDSIGTPQYNMKLGQRRADSVKAFFVKKGIDASR 311
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
++ S G P A NRR ++ K
Sbjct: 312 IEAISLGLTDPVATNKTAQGRALNRRCVIKFKN 344
>gi|261365147|ref|ZP_05978030.1| OmpA family protein [Neisseria mucosa ATCC 25996]
gi|288566399|gb|EFC87959.1| OmpA family protein [Neisseria mucosa ATCC 25996]
Length = 421
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 51/124 (41%), Gaps = 5/124 (4%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG- 93
++ Q++ + ++ F++ S I+ VL+ + L+ + ++ G+ D+
Sbjct: 266 VSVEDFQDRSTVTILGDGLFESGSAQIQDQYYPVLARVSQALDSVEGQIVVTGYTDDKPI 325
Query: 94 ---SRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
+ S+ L RA AV + + +R++ G P + AKNRR
Sbjct: 326 QSLNFPSNWHLSQARADAVKEILLNYIKNGGTRIRSEGRGSTDPVAPNDTLENRAKNRRV 385
Query: 150 IVFL 153
+ L
Sbjct: 386 EITL 389
>gi|126641241|ref|YP_001084225.1| OmpA/MotB [Acinetobacter baumannii ATCC 17978]
Length = 397
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 61/148 (41%), Gaps = 2/148 (1%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG-DSVFFDTSSYSIRPADI 66
++ +A S ++L ++ + + ++ + F + S I +
Sbjct: 248 VVAAAPETAEQSVSNSLSASQTALTAIDPNNVDVNALVKALNLQIINFASGSSDIPADNK 307
Query: 67 QVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
+L + + + GH D G+ ++ AL RRA AV +Y V++G+ AS++
Sbjct: 308 AILDQAATLLNKVSGVKLDVGGHTDSTGNAAANKALSQRRAQAVVDYLVSKGVDASKLVA 367
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+G E P E+ KNRR +
Sbjct: 368 KGHGSEQPVADNTTEEGRFKNRRIEFSV 395
>gi|39997403|ref|NP_953354.1| peptidoglycan-associated lipoprotein [Geobacter sulfurreducens PCA]
gi|39984294|gb|AAR35681.1| peptidoglycan-associated lipoprotein [Geobacter sulfurreducens PCA]
Length = 187
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 9/153 (5%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD--------SVFFDTSSYS 60
++SA + + + + + E + G+ V+FD ++
Sbjct: 32 VVSAPAQLPATETVAPPATTIDAHESIAATDIAEDRITPAGNATQASPLKIVYFDFDAWV 91
Query: 61 IRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
+ ++L+ W + ++EGH DE GS ++ALG +RA + Y GI
Sbjct: 92 LNGEAREILAGNAEWLRKNPGVAVILEGHTDERGSDAYNLALGEQRAKSAMKYLQTLGID 151
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
A RM V SYG+E P+V GHDE A+A NRR
Sbjct: 152 AGRMTVVSYGEEKPAVEGHDESAWAGNRRVEFI 184
>gi|332673924|gb|AEE70741.1| peptidoglycan associated lipoprotein [Helicobacter pylori 83]
Length = 179
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 76/177 (42%), Gaps = 24/177 (13%)
Query: 1 MQYSTIFIILSAITMMSIS-------------GIDNLDTKISSPDTVLNESSLQEQFSSS 47
M+ S++F L A ++ + + S +TV + +++ +
Sbjct: 1 MKRSSVFGFLVAFLFIAGCKHNMDKETVAGDVSAKAVQSAPVSTETVQEKQEPKQEPAPV 60
Query: 48 VGDS-----------VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRN 96
V + ++FD Y I+ +D + L + +++ L+EG+ DE GS
Sbjct: 61 VEEKPAVESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEFGSSE 120
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ ALG++R +V N V +G+ +K S+G+ P + Y +NRR V L
Sbjct: 121 YNQALGVKRTLSVKNALVIKGVEKDMIKTISFGETKPKCTQKTRECYKENRRVDVKL 177
>gi|168179911|ref|ZP_02614575.1| chemotaxis MotB protein [Clostridium botulinum NCTC 2916]
gi|182669337|gb|EDT81313.1| chemotaxis MotB protein [Clostridium botulinum NCTC 2916]
Length = 254
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 47/118 (39%), Gaps = 5/118 (4%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RN 96
+ + D V F++ + +L+ + L+ D + + GH D
Sbjct: 117 ADGLEIDIQDVVLFNSGDAEVLKQSSALLTQISKMLKGLDNNIKVTGHTDNQPISNSKFR 176
Query: 97 SSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA V N+ G +++ + +YG+ MP E AKNRR + +
Sbjct: 177 SNWDLSAIRAINVMNFLSNIGGIPANKLSIQAYGEYMPKFDNATEAGRAKNRRVEISI 234
>gi|150388139|ref|YP_001318188.1| OmpA/MotB domain-containing protein [Alkaliphilus metalliredigens
QYMF]
gi|149948001|gb|ABR46529.1| OmpA/MotB domain protein [Alkaliphilus metalliredigens QYMF]
Length = 237
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 47/120 (39%), Gaps = 5/120 (4%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNS- 97
+ DSV F + I +L ++ + L D +IEG D + + +
Sbjct: 116 EEERGLVIRFRDSVLFGSGQARISQEGYMLLDHVTAKLRTIDNAIVIEGFTDNIPIQTNE 175
Query: 98 ---SIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L + RA V Y I SR+ V+ +G++ P + A NRR + +
Sbjct: 176 FPSNWELSVARAIGVARYMIDEEYIEESRISVSGFGEQQPIDSNETNEGRANNRRIEITI 235
>gi|313203319|ref|YP_004041976.1| ompa/motb domain protein [Paludibacter propionicigenes WB4]
gi|312442635|gb|ADQ78991.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4]
Length = 817
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 45/129 (34%), Gaps = 1/129 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFL 84
++ + + + F+T I+P +L+ + +
Sbjct: 681 AGVAENEGCPAIKKEVKTLFKKALQGIQFETGKDKIKPKSYPILNQIAAVMTANPTYLIE 740
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+ GH D +G + L +RA +V Y + +GI + RM YG +P
Sbjct: 741 VRGHTDNVGDAKLNQVLSQKRAESVRKYLIGKGIDSKRMTANGYGDTLPVSTNSTPAGRT 800
Query: 145 KNRRAIVFL 153
NRR +
Sbjct: 801 LNRRVEFEI 809
>gi|221201698|ref|ZP_03574736.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M]
gi|221207227|ref|ZP_03580237.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2]
gi|221172815|gb|EEE05252.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2]
gi|221178514|gb|EEE10923.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M]
Length = 310
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++ F+T S ++ P Q+L + + + + I GH D G+R S+IAL RA
Sbjct: 203 NRTIEFETGSATLTPQGKQILDQMAAALAKLQNRTVDIIGHTDNSGNRTSNIALSQARAD 262
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV Y + +GIS +M T G + P D A+NRR +
Sbjct: 263 AVKGYLITKGISPQQMTTTGVGPDQPIAPNDTADGRARNRRIEFRV 308
>gi|254454298|ref|ZP_05067735.1| OmpA family domain protein [Octadecabacter antarcticus 238]
gi|198268704|gb|EDY92974.1| OmpA family domain protein [Octadecabacter antarcticus 238]
Length = 219
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 52/126 (41%), Gaps = 1/126 (0%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG-SWLEKHDCDFLIEG 87
+ + Q ++ + FDT S ++ L+ L S + + G
Sbjct: 90 QQMGSNAQIVNTGSQLIVTLPQDILFDTGSAALSGGLRSDLNALAASMNNFPNSTVNVIG 149
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
H D G+ + L RRA AV + + G+SA+R++ G++ P + + +NR
Sbjct: 150 HTDSDGTAAFNQDLSARRAQAVSSVLIQSGVSANRIRSIGRGEDAPIASNLNAEGKRQNR 209
Query: 148 RAIVFL 153
R + +
Sbjct: 210 RVEITI 215
>gi|78189654|ref|YP_379992.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins-like [Chlorobium chlorochromatii CaD3]
gi|78171853|gb|ABB28949.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins-like protein [Chlorobium chlorochromatii
CaD3]
Length = 211
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRA 106
+ + FD IR + L ++ +W+++H IE H D GS +IALG RRA
Sbjct: 104 ILGDILFDFDKSFIRKDAVPQLQDVAAWMKEHPTKNVTIEAHCDSKGSEAYNIALGKRRA 163
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
A Y V +GI ++R+K SYGK+ P + G DE A A+NRR ++
Sbjct: 164 DAAKAYLVNKGIDSNRLKTISYGKDKPLMNGIDESARARNRRVHFVVE 211
>gi|238798361|ref|ZP_04641844.1| Inner membrane lipoprotein yiaD [Yersinia mollaretii ATCC 43969]
gi|238717819|gb|EEQ09652.1| Inner membrane lipoprotein yiaD [Yersinia mollaretii ATCC 43969]
Length = 219
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FDT S +++PA L+ + L+++D + G D
Sbjct: 94 GTGVSVTRQGDNIVLNMPNNVTFDTDSSNLKPAGANTLTGVAMVLKEYDKTAVNVTGFTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G+R ++ L +RA +V + + +G++A+R++ + G + P A+NRR
Sbjct: 154 SSGARAHNMTLSQQRADSVGSALIVQGVAANRIRTSGAGPDNPVASNSTAAGKAQNRRVE 213
Query: 151 VFLK 154
+ L
Sbjct: 214 ITLS 217
>gi|311278468|ref|YP_003940699.1| OmpA/MotB domain-containing protein [Enterobacter cloacae SCF1]
gi|308747663|gb|ADO47415.1| OmpA/MotB domain protein [Enterobacter cloacae SCF1]
Length = 160
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 30/158 (18%), Positives = 56/158 (35%), Gaps = 4/158 (2%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDT--VLNESSLQEQFSSSVGDSVFFDTSS 58
M I +L A+ ++ L S + +S + D + F T+
Sbjct: 1 MLKRFIAPVLLAVFFLTGCQAPQGKFSPEQVAAMKSLGFSESEGDWSLGLSDKILFSTND 60
Query: 59 YSIRPADIQVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARG 117
Y + Q ++ + S L ++GH D G + + AL L+RA V + +
Sbjct: 61 YQLNTQSRQQIAAMASRLAATGITHARMDGHTDNYGEDSYNEALSLKRADRVADAWAEGA 120
Query: 118 ISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ GK+ P ++NRR + +
Sbjct: 121 RIPRGNLTTQGLGKKYPVASNATAQGRSENRRVTIVIS 158
>gi|254506121|ref|ZP_05118265.1| outer membrane protein [Vibrio parahaemolyticus 16]
gi|219550939|gb|EED27920.1| outer membrane protein [Vibrio parahaemolyticus 16]
Length = 211
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 52/106 (49%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRR 105
V V+F+ ++ VL+ + +E + + + GH D +G + +LGL+R
Sbjct: 103 PEVIARVYFNFDQSTLTQQSEYVLTRVIRMVESNSSNLELAGHTDNVGDAGYNFSLGLKR 162
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ +V +Y + +G+ R+ TSYG+ P V ++ NRR +
Sbjct: 163 SKSVEDYLIDQGVDPKRVTTTSYGETKPFVDNMSDENRKLNRRVEI 208
>gi|82523863|emb|CAI78811.1| outer membrane protein and related peptidoglycan-associated
[uncultured candidate division WS3 bacterium]
Length = 192
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHA 89
P E+ + V D + F+ Y++ ++L+ +++ IEGH
Sbjct: 68 PAAEEIETVETKPAPVLVMDDIHFEFDKYTLTADARRMLAQTAKAMKEMPEVRIQIEGHC 127
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G++ ++ALG RRA A +Y V GI A+R+ + S+G+E P +E+A+AKNRRA
Sbjct: 128 DSRGTQEYNLALGQRRAQAAKDYLVNLGIDAARVSIISFGEERPLDPRENEEAWAKNRRA 187
Query: 150 IV 151
Sbjct: 188 HF 189
>gi|114048845|ref|YP_739395.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-7]
gi|113890287|gb|ABI44338.1| OmpA/MotB domain protein [Shewanella sp. MR-7]
Length = 230
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHA 89
T ++ + + ++ + V F + +VL+++ +++ + G+
Sbjct: 102 ASTGVSVTRDGDNIILNMPNEVTFGVDQTELSDGAKRVLNSVALVAKEYSKTQLNVLGYT 161
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GS + ++ L RA V NY +++G++++R+K G+ P + A+NRR
Sbjct: 162 DSSGSDSYNLRLSQVRASEVGNYLMSKGVASARVKSKGMGEASPIASNANAAGRAQNRRV 221
Query: 150 IVFL 153
+ L
Sbjct: 222 EIVL 225
>gi|332293158|ref|YP_004431767.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332171244|gb|AEE20499.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 236
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 3/135 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDS--VFFDTSSYSIRPADIQVLSNLGSWLEKH 79
D +I + + + ++ V+FDT+ Y++ A +L+ L + ++++
Sbjct: 84 DKQAQQIEQELPGATVERIDDGIVVTFDENSGVYFDTAKYNVNTASQTLLNKLSNIMKEY 143
Query: 80 -DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ ++ GH D +GS +++ L RA AV NY V G+SA R YG+ P+
Sbjct: 144 NQTNVVVAGHTDSVGSDTNNMTLSQNRANAVTNYMVGTGLSAGRFTTVWYGETQPAASND 203
Query: 139 DEDAYAKNRRAIVFL 153
+ A+NRR + +
Sbjct: 204 TAEGRAQNRRVQLAI 218
>gi|319787865|ref|YP_004147340.1| OmpA/MotB domain protein [Pseudoxanthomonas suwonensis 11-1]
gi|317466377|gb|ADV28109.1| OmpA/MotB domain protein [Pseudoxanthomonas suwonensis 11-1]
Length = 369
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 55/139 (39%), Gaps = 8/139 (5%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDF 83
D S S V FD ++RP + +LS L+++
Sbjct: 231 DKCPGSQAGQAIGPDGCPVPVSIDLKGVNFDYDKATLRPDAVAILSEAAEILKRYPDLRV 290
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYG----- 137
+ GH D G+ + L RRA AV++Y + GI ASR+ YG+ P
Sbjct: 291 EVAGHTDSRGTDAYNQKLSERRAKAVYDYLTSNGIDASRLVGPIGYGESRPIAPNANPDG 350
Query: 138 -HDEDAYAKNRRAIVFLKG 155
+ + AKNRR + ++
Sbjct: 351 SDNPEGRAKNRRTELNVQN 369
>gi|148839593|sp|A3M8K2|OMP38_ACIBT RecName: Full=Outer membrane protein omp38; Flags: Precursor
gi|193078282|gb|ABO13246.2| outer membrane protein A [Acinetobacter baumannii ATCC 17978]
Length = 356
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 56/141 (39%), Gaps = 5/141 (3%)
Query: 20 GIDNLDTKISSPDTVLNESS-LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LE 77
++ P V + L E + + VFFDT+ +I+ ++ + E
Sbjct: 201 AAPVVEVAPVEPTPVTPQPQELTEDLNMEL--RVFFDTNKSNIKDQYKPEIAKVAEKLSE 258
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVY 136
+ IEGH D G R + L L RA +V + V + ASR+ + + P
Sbjct: 259 YPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIAD 318
Query: 137 GHDEDAYAKNRRAIVFLKGCR 157
++ A NRR + G R
Sbjct: 319 NKTKEGRAMNRRVFATITGSR 339
>gi|110638581|ref|YP_678790.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
gi|110281262|gb|ABG59448.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
Length = 694
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 1/105 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYA 108
+++FFDT +R L+ ++ + I GH D +G + L RA A
Sbjct: 587 NNLFFDTGKSDLRKESYAELNRTVELMKLYLTMTIEISGHTDNVGGDAENQTLSENRAKA 646
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V NY V+ GI ASR++ YGK P + NRR +
Sbjct: 647 VVNYLVSHGIDASRVQSKGYGKTKPVSTNDTDHGRQLNRRVDFTI 691
>gi|33596991|ref|NP_884634.1| putative lipoprotein [Bordetella parapertussis 12822]
gi|33566442|emb|CAE37695.1| putative lipoprotein [Bordetella parapertussis]
Length = 200
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 58/143 (40%), Gaps = 7/143 (4%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
IS + +++ ++ ++ + ++ V FD I A L ++ ++
Sbjct: 55 ISDLSAQVGALAARHEGVSVRQGKDAVTIAMMGDVLFDFDKADILAAAEPTLQDIAKLIK 114
Query: 78 KHDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ IEGH D GS + + L LRRA AV + A G+ A+++ V G P
Sbjct: 115 SPATGIVAIEGHTDSKGSDSYNKGLSLRRAQAVAQWLGAHGVDAAKLSVRGLGAARPVQP 174
Query: 137 G------HDEDAYAKNRRAIVFL 153
+ A+NRR L
Sbjct: 175 NQLANGADNPQGRAQNRRVEFVL 197
>gi|194334296|ref|YP_002016156.1| OmpA/MotB domain-containing protein [Prosthecochloris aestuarii DSM
271]
gi|194312114|gb|ACF46509.1| OmpA/MotB domain protein [Prosthecochloris aestuarii DSM 271]
Length = 229
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 52/133 (39%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
D +I + + E + F T+S ++ + L S + D
Sbjct: 80 DAQAEEIDNSVDGATVERVGEGIRVVFDSGLLFSTASSTLTSTSRYNIQKLASILNKYED 139
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ +IEGH D +G+ +S+ L RA +V + A G+ SR+ YG+ P
Sbjct: 140 TNVVIEGHTDSVGTESSNQQLSENRAESVASLLRAYGVYGSRISTVGYGETRPVASNETA 199
Query: 141 DAYAKNRRAIVFL 153
NRR V +
Sbjct: 200 QGKKLNRRVEVLI 212
>gi|313201307|ref|YP_004039965.1| ompa/motb domain-containing protein [Methylovorus sp. MP688]
gi|312440623|gb|ADQ84729.1| OmpA/MotB domain protein [Methylovorus sp. MP688]
Length = 222
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 52/135 (38%), Gaps = 1/135 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
+ ++ V + + + + FD+ I+P VL + +
Sbjct: 77 EQKQQMEQATAGTGVQVSQTADNRLKLDIPSDISFDSGKSDIKPNFRPVLDSFAQSLVAN 136
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
I GH D G+ + L L RA +Y V RG+++SR G P V +
Sbjct: 137 PATKVTIVGHTDNTGTDAVNNPLSLNRANHARDYLVTRGVASSRFTTEGRGSHEPLVENN 196
Query: 139 DEDAYAKNRRAIVFL 153
+ AKNRR +F+
Sbjct: 197 SDANRAKNRRVEIFV 211
>gi|283955279|ref|ZP_06372779.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni
subsp. jejuni 414]
gi|283793193|gb|EFC31962.1| peptidoglycan associated lipoprotein (omp18) [Campylobacter jejuni
subsp. jejuni 414]
Length = 165
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 10/164 (6%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG--------DSV 52
M+ I + ++S + S S ++ + + V
Sbjct: 1 MKKILFTSIAALAVIISGCSTKSTSVSSDSSVDSNRGSGGRDGWDIDSQISQLNDTLNKV 60
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHD--CDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+FD ++IRP V+S + + +EG+ DE G+ + ALGL+RA AV
Sbjct: 61 YFDFDKFNIRPDMQNVVSTNANIFNTEVSGVNITVEGNCDEWGTDEYNQALGLKRAKAVK 120
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+A+G++A R+ V SYG+ P + A+NRRA L
Sbjct: 121 EALIAKGVNADRIAVKSYGETNPVCTEKTKACDAQNRRAEFKLS 164
>gi|192360671|ref|YP_001983282.1| OmpA family protein [Cellvibrio japonicus Ueda107]
gi|190686836|gb|ACE84514.1| OmpA family protein [Cellvibrio japonicus Ueda107]
Length = 217
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRA 106
+ ++ F TSS IR VL+++ + E + + GH D GS + + L RRA
Sbjct: 107 MPGNITFATSSADIRSDFFPVLNSVAKVVAEFNQTSIRVTGHTDSTGSDSINQPLSERRA 166
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+V Y ++ ++++R++ YG P +NRR + L
Sbjct: 167 DSVAMYLRSQKVASARIQAYGYGSRYPVASNDTPTGREQNRRVELEL 213
>gi|260557183|ref|ZP_05829399.1| outer membrane protein omp38 [Acinetobacter baumannii ATCC 19606]
gi|75438841|sp|Q6RYW5|OMP38_ACIBA RecName: Full=Outer membrane protein omp38; AltName: Full=Outer
membrane protein ompA; AltName: Full=Outer membrane
protein ompAb; Flags: Precursor
gi|40287452|gb|AAR83911.1| outer membrane protein A [Acinetobacter baumannii]
gi|260409289|gb|EEX02591.1| outer membrane protein omp38 [Acinetobacter baumannii ATCC 19606]
Length = 356
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 56/141 (39%), Gaps = 5/141 (3%)
Query: 20 GIDNLDTKISSPDTVLNESS-LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LE 77
++ P V + L E + + VFFDT+ +I+ ++ + E
Sbjct: 201 AAPVVEVAPVEPTPVAPQPQELTEDLNMEL--RVFFDTNKSNIKDQYKPEIAKVAEKLSE 258
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVY 136
+ IEGH D G R + L L RA +V + V + ASR+ + + P
Sbjct: 259 YPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIAD 318
Query: 137 GHDEDAYAKNRRAIVFLKGCR 157
++ A NRR + G R
Sbjct: 319 NKTKEGRAMNRRVFATITGSR 339
>gi|282865311|ref|ZP_06274363.1| OmpA/MotB domain protein [Streptomyces sp. ACTE]
gi|282559784|gb|EFB65334.1| OmpA/MotB domain protein [Streptomyces sp. ACTE]
Length = 213
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 48/140 (34%), Gaps = 2/140 (1%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
++ + ++ + + ++ V F S + ++ +
Sbjct: 64 ATLAPPKVLDIKSVVEDLGGEERREDTNADIKFALQAEVLFGKDSAKLSSDANSRINAIA 123
Query: 74 SWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFV-ARGISASRMKVTSYGKE 131
+ ++ D + G D LGS L RA AV N + + ++ YG++
Sbjct: 124 AEIKNQDAKKVRVFGFTDNLGSSEHGDVLSKERAEAVHNVLDASLAGTGITFEIRGYGEQ 183
Query: 132 MPSVYGHDEDAYAKNRRAIV 151
P E+ KNRR V
Sbjct: 184 YPIADNSSEEGRKKNRRVEV 203
>gi|190893274|ref|YP_001979816.1| outer membrane peptidoglycan-associated lipoprotein [Rhizobium etli
CIAT 652]
gi|190698553|gb|ACE92638.1| outer membrane peptidoglycan-associated lipoprotein [Rhizobium etli
CIAT 652]
Length = 178
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 50/121 (41%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
+ F+ +VGD +FFDT S SIR Q L W + +EGHADE G+R
Sbjct: 56 TPGSAQDFTVNVGDRIFFDTDSSSIRADASQTLDRQAQWLARYPNYQITVEGHADERGTR 115
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
++ALG RRA A +Y +RG+ A RMK SYGKE P D +++NRRA+ L G
Sbjct: 116 EYNLALGARRAAAAKDYLASRGVPAQRMKTISYGKERPVAVCDDISCWSQNRRAVTVLGG 175
Query: 156 C 156
Sbjct: 176 A 176
>gi|157370029|ref|YP_001478018.1| OmpA/MotB domain-containing protein [Serratia proteamaculans 568]
gi|157321793|gb|ABV40890.1| OmpA/MotB domain protein [Serratia proteamaculans 568]
Length = 569
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 43/114 (37%), Gaps = 2/114 (1%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIA 100
+ FD+ Y+++ ++L N L K ++ GH D G+ +
Sbjct: 427 APKIVRLDSMSLFDSGKYALKAGSTKMLINSLVGIKAKPGWLIVVAGHTDNTGNPALNQT 486
Query: 101 LGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L +RA AV ++ G V YG+ P + A NRR + L
Sbjct: 487 LSQKRAAAVRDWMRDTGDVPESCFAVQGYGESRPVATNDTPEGRALNRRVEISL 540
>gi|319763880|ref|YP_004127817.1| ompa/motb domain protein [Alicycliphilus denitrificans BC]
gi|330823856|ref|YP_004387159.1| OmpA/MotB domain-containing protein [Alicycliphilus denitrificans
K601]
gi|317118441|gb|ADV00930.1| OmpA/MotB domain protein [Alicycliphilus denitrificans BC]
gi|329309228|gb|AEB83643.1| OmpA/MotB domain protein [Alicycliphilus denitrificans K601]
Length = 171
Score = 77.9 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 61/157 (38%), Gaps = 6/157 (3%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISSPDTVLN-----ESSLQEQFSSSVGDSVFFDTS 57
+++ +A+ + + + + + + + FD +
Sbjct: 12 LRLLWLCFAALALGACQSPPPAAADAQAARRAQVLREQGFVQTGDGWELQMSGKLLFDFN 71
Query: 58 SYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
S ++ ++L +G L +EGHAD+ GS + + L LRRA AV
Sbjct: 72 SDAMTGERREMLVRMGHALVGVGVRALRVEGHADDQGSPDYNERLSLRRAQAVAQVLAEA 131
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
GI R+ + YG P V G E A +NRR + +
Sbjct: 132 GIPRERIDIRGYGASRPLVIGTSEAARQENRRVALIV 168
>gi|319762344|ref|YP_004126281.1| peptidoglycan-associated lipoprotein [Alicycliphilus denitrificans
BC]
gi|330825735|ref|YP_004389038.1| peptidoglycan-associated lipoprotein [Alicycliphilus denitrificans
K601]
gi|317116905|gb|ADU99393.1| peptidoglycan-associated lipoprotein [Alicycliphilus denitrificans
BC]
gi|329311107|gb|AEB85522.1| peptidoglycan-associated lipoprotein [Alicycliphilus denitrificans
K601]
Length = 180
Score = 77.9 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 2/142 (1%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS 70
A + + + +P L +S + V ++FD S++++P VL
Sbjct: 37 GATSTVPGANSGGTSQSGVAPVD-LTQSGREAGGPVGVARIIYFDFDSFTVKPEYQSVLE 95
Query: 71 NLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
+L+ ++EGH DE G R ++ALG +RA AV G+ ++M+ SYG
Sbjct: 96 GHSRYLKASSARKVMLEGHTDERGGREYNLALGQKRAEAVRRSLALLGVPDAQMEAVSYG 155
Query: 130 KEMPSVYGHDEDAYAKNRRAIV 151
+E P+ GH E A+A+NRR +
Sbjct: 156 EEKPAAQGHSESAFAQNRRVEL 177
>gi|6977946|emb|CAB75338.1| OMP 16 protein [Pasteurella multocida]
Length = 130
Score = 77.9 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 45/133 (33%), Positives = 71/133 (53%), Gaps = 6/133 (4%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEK 78
G D + LQ+++ ++V+F Y+I +Q+L +
Sbjct: 1 GSSKKDESAGQMFGGYSVQDLQQRY-----NTVYFGFDKYNIEGEYVQILDAHAAFLNAT 55
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
++EG+ DE G+ +IALG RRA AV +Y A+G+ A ++ SYG+E P+V GH
Sbjct: 56 PATKVVVEGNTDERGTPEYNIALGQRRADAVKHYLSAKGVQAGQVSTVSYGEEKPAVLGH 115
Query: 139 DEDAYAKNRRAIV 151
DE AY+KNRRA++
Sbjct: 116 DEAAYSKNRRAVL 128
>gi|328884733|emb|CCA57972.1| secreted protein [Streptomyces venezuelae ATCC 10712]
Length = 205
Score = 77.9 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 23/145 (15%), Positives = 52/145 (35%), Gaps = 1/145 (0%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQ 67
++L ++ + + ++ + + ++ V F +S + PA
Sbjct: 50 LMLPDGATLAPAKVLDIKQIVEEEGGEQRRQDTNVDVTFALQAEVLFPKNSAKLTPAANA 109
Query: 68 VLSNLGSWLEK-HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT 126
++ + + ++K + G D LG+ + L RA AV + +
Sbjct: 110 RIAAIAAEIKKLGSGRVRVFGFTDNLGTYAHGLKLSKERAVAVQQVLARSLDQGTTFDIR 169
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIV 151
Y ++ P E+ KNRR +
Sbjct: 170 GYSEDYPIADNATEEGRKKNRRVEI 194
>gi|225619153|ref|YP_002720379.1| outer membrane protein OmpA family [Brachyspira hyodysenteriae WA1]
gi|225213972|gb|ACN82706.1| outer membrane protein OmpA family [Brachyspira hyodysenteriae WA1]
Length = 403
Score = 77.9 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 54/125 (43%), Gaps = 4/125 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL--GSWLEKHDCDFLIEGHA 89
D + ++ E +G+ + FDT SY+++P + N+ D + ++EGH
Sbjct: 279 DDNVTIDTVPEGLVLRLGE-ILFDTDSYTLKPEAKNTIDNVIKAIKETYPDREIIVEGHT 337
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G + + L +RA +V +Y + ++ + + P D KNRR
Sbjct: 338 DNTGRKEYNQDLSEKRAKSVADYILPNLDH-DKLSYKGFADDEPIASNDTPDGRRKNRRV 396
Query: 150 IVFLK 154
+ +K
Sbjct: 397 DIIIK 401
>gi|83589634|ref|YP_429643.1| OmpA/MotB [Moorella thermoacetica ATCC 39073]
gi|83572548|gb|ABC19100.1| OmpA/MotB [Moorella thermoacetica ATCC 39073]
Length = 256
Score = 77.9 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 45/132 (34%), Gaps = 5/132 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ ++ + + + + + FD+ ++P Q+L L L + + +E
Sbjct: 107 TANGLESEVEVRYEDRGIALDIKERILFDSGRADLKPEARQLLDKLSGLLSRLPNEVKVE 166
Query: 87 GHADELGSRNSSIALGLRRAYA-----VFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
G+ D + A V + + R YG+ P +
Sbjct: 167 GYTDNRPIHTVQFPTNWELSTARAARVVRYFIEEHHLQPDRFMAIGYGEYHPLYPNDSPE 226
Query: 142 AYAKNRRAIVFL 153
A+NRR ++ L
Sbjct: 227 HMAENRRVVLLL 238
>gi|326392537|ref|ZP_08213903.1| OmpA/MotB domain protein [Thermoanaerobacter ethanolicus JW 200]
gi|325991422|gb|EGD50048.1| OmpA/MotB domain protein [Thermoanaerobacter ethanolicus JW 200]
Length = 114
Score = 77.9 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 42/107 (39%), Gaps = 5/107 (4%)
Query: 58 SYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNS----SIALGLRRAYAVFNYF 113
S + P + VL +G+ L+ +EG D+L NS + L + RA V
Sbjct: 1 SADVHPEEKDVLIKIGNMLKTLPNHIRVEGFTDDLPMHNSKFDSNWELSVIRATNVVKIL 60
Query: 114 VARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
V I R+ YG+ P V E+ NRR + + N
Sbjct: 61 VNEVGIEPQRISAVGYGEYRPVVPNDSEEHRRLNRRVDIVIMNTEYN 107
>gi|299770927|ref|YP_003732953.1| OmpA family protein [Acinetobacter sp. DR1]
gi|298701015|gb|ADI91580.1| OmpA family protein [Acinetobacter sp. DR1]
Length = 471
Score = 77.9 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 29/148 (19%), Positives = 59/148 (39%), Gaps = 3/148 (2%)
Query: 9 ILSAITMMSISGIDN--LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADI 66
++ A + + + N ++ + N + + + F + S I +
Sbjct: 322 VVGAAPVTAEQSVSNSLTASQTALGSIDPNNVDVNALVKALNLQIINFASGSSDIPADNK 381
Query: 67 QVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
+L + + + GH D G+ ++ AL RRA AV +Y ++G+ AS++
Sbjct: 382 AILDQAATLLNKVTSVKLNVGGHTDSTGNAAANKALSQRRAQAVVDYLKSKGVDASKLVA 441
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+G + P E+ KNRR +
Sbjct: 442 EGHGSDQPVAENTTEEGRFKNRRIEFSV 469
>gi|327398898|ref|YP_004339767.1| OmpA/MotB domain-containing protein [Hippea maritima DSM 10411]
gi|327181527|gb|AEA33708.1| OmpA/MotB domain protein [Hippea maritima DSM 10411]
Length = 310
Score = 77.9 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVF 110
++FD + +I+P+ + + L+++ + GH D +G N ++ L +RA AV
Sbjct: 206 IYFDFNKATIKPSSEPTIKEIARLLKENPSLKLYVVGHTDSIGDLNYNMKLSKKRAKAVV 265
Query: 111 NYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ V + + +R+K G P E+ +KNRR +
Sbjct: 266 DELVKKYNINPNRLKAFGVGPLAPVASNKTEEGRSKNRRVELI 308
>gi|300955043|ref|ZP_07167452.1| OmpA family protein [Escherichia coli MS 175-1]
gi|300318040|gb|EFJ67824.1| OmpA family protein [Escherichia coli MS 175-1]
Length = 215
Score = 77.9 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 60/122 (49%), Gaps = 1/122 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD+SS +++PA L+ + L+++ + G+ D
Sbjct: 94 GTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + ++ L +RA +V + + +G+ ASR++ G P + A+NRR
Sbjct: 154 STGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVE 213
Query: 151 VF 152
+
Sbjct: 214 IT 215
>gi|126642630|ref|YP_001085614.1| peptidoglycan-associated lipoprotein precursor [Acinetobacter
baumannii ATCC 17978]
Length = 170
Score = 77.9 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
++ + ++ V FD S + D Q L + + + + GH D
Sbjct: 40 AGASSKGVTEANKAALAKRVVHFDYDSSDLSTEDYQTLQAHAQFLMANANSKVALTGHTD 99
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
E G+R ++ALG RRA AV NY + G++ +++ SYGKE P GHDE A+ +NRR
Sbjct: 100 ERGTREYNMALGERRAKAVQNYLITSGVNPQQLEAVSYGKEAPVNPGHDESAWKENRRVE 159
Query: 151 V 151
+
Sbjct: 160 I 160
>gi|119899491|ref|YP_934704.1| lipoprotein attached to the membrane by a lipid anchor [Azoarcus
sp. BH72]
gi|119671904|emb|CAL95818.1| lipoprotein attached to the membrane by a lipid anchor [Azoarcus
sp. BH72]
Length = 193
Score = 77.9 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 54/138 (39%), Gaps = 1/138 (0%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWL 76
+ L + + + + S F + RPA +VL + +
Sbjct: 54 AALQKELSGALRGVQDAEVGEATADGIHLRIPVSNGFASGGSEPRPALTKVLDSLVAPLA 113
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ + GH D LGS ++ L ++RA AV Y +RGI+ R+ G+ P
Sbjct: 114 ARPGVGIKVIGHTDGLGSEMYNLKLSIQRAEAVMEYLRSRGIAFDRLSADGKGETEPIAD 173
Query: 137 GHDEDAYAKNRRAIVFLK 154
E A+NRR + L+
Sbjct: 174 NAKEATRARNRRVEIVLR 191
>gi|260892160|ref|YP_003238257.1| OmpA/MotB domain protein [Ammonifex degensii KC4]
gi|260864301|gb|ACX51407.1| OmpA/MotB domain protein [Ammonifex degensii KC4]
Length = 268
Score = 77.9 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 43/127 (33%), Gaps = 5/127 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ + SV D+V F S + P +V+ +G L K IEGH +
Sbjct: 115 QAKITARIEERGLVVSVLDTVLFPIGSAELTPQAKEVVREVGKILLKMPNCVRIEGHTCD 174
Query: 92 LGSRNS----SIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
L + L + RA +V R+ Y + P V E+ N
Sbjct: 175 LPIHTPRYPSNWELSVARATSVVQELIHTVNFPPQRLCACGYAEYRPLVPNDSEEHRQMN 234
Query: 147 RRAIVFL 153
RR +
Sbjct: 235 RRVDFVV 241
>gi|184159409|ref|YP_001847748.1| outer membrane protein [Acinetobacter baumannii ACICU]
gi|332876249|ref|ZP_08444024.1| outer membrane protein Omp38 [Acinetobacter baumannii 6014059]
gi|183211003|gb|ACC58401.1| Outer membrane protein [Acinetobacter baumannii ACICU]
gi|322509321|gb|ADX04775.1| Outer membrane protein omp38 precursor [Acinetobacter baumannii
1656-2]
gi|323519348|gb|ADX93729.1| Outer membrane protein [Acinetobacter baumannii TCDC-AB0715]
gi|332735521|gb|EGJ66573.1| outer membrane protein Omp38 [Acinetobacter baumannii 6014059]
Length = 356
Score = 77.9 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 56/141 (39%), Gaps = 5/141 (3%)
Query: 20 GIDNLDTKISSPDTVLNESS-LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LE 77
++ P V + L E + + VFFDT+ +I+ ++ + E
Sbjct: 201 AAPVVEVAPVEPTPVAPQPQELTEDLNMEL--RVFFDTNKSNIKDQYKPEIAKVAEKLSE 258
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVY 136
+ IEGH D G R + L L RA +V + V + ASR+ + + P
Sbjct: 259 YPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIAD 318
Query: 137 GHDEDAYAKNRRAIVFLKGCR 157
++ A NRR + G R
Sbjct: 319 NKTKEGRAMNRRVFATITGSR 339
>gi|226939690|ref|YP_002794763.1| OmpA/MotB [Laribacter hongkongensis HLHK9]
gi|226714616|gb|ACO73754.1| OmpA/MotB [Laribacter hongkongensis HLHK9]
Length = 225
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 62/141 (43%), Gaps = 1/141 (0%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LE 77
+ +++ S + + + + ++ + F+ +S ++PA ++ + +
Sbjct: 83 AELESKLRSEISSGQMQLQQNADQSLVVTMNEDATFNLNSAVVKPAFYPTMNKVAETLKQ 142
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+ +I G+ D G+ + L L+RA AV +Y V +G++A+R++ G+ P
Sbjct: 143 YNQTTLVIRGYTDSTGAAAYNQQLSLKRANAVKSYLVGQGVAANRIQTIGMGESDPRASN 202
Query: 138 HDEDAYAKNRRAIVFLKGCRA 158
A NRR + + +
Sbjct: 203 DTAQGRAMNRRVSITIVPQQG 223
>gi|170759482|ref|YP_001787603.1| chemotaxis MotB protein [Clostridium botulinum A3 str. Loch Maree]
gi|169406471|gb|ACA54882.1| putative chemotaxis MotB protein [Clostridium botulinum A3 str.
Loch Maree]
Length = 254
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 47/118 (39%), Gaps = 5/118 (4%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RN 96
+ + D V F++ + +L+ + L+ D + + GH D
Sbjct: 117 ADGLEIDIQDVVLFNSGDAEVLKQSSALLTQISKMLKGLDNNIKVTGHTDNQPISNSKFR 176
Query: 97 SSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA V N+ G +++ + +YG+ MP E AKNRR + +
Sbjct: 177 SNWDLSAIRAINVMNFLSNIGGIPANKLSIQAYGEYMPKFDNATEAGRAKNRRVEISI 234
>gi|329888176|ref|ZP_08266774.1| ompA family protein [Brevundimonas diminuta ATCC 11568]
gi|328846732|gb|EGF96294.1| ompA family protein [Brevundimonas diminuta ATCC 11568]
Length = 330
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 49/140 (35%), Gaps = 4/140 (2%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+M + T P + L + V V F I A + +
Sbjct: 191 SMAVVEAKALAPTAGLLPASELARKIAADG---RVAVPVEFALDKADILDASRPQIDAMA 247
Query: 74 SWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
L+ +EGH D G+ + L RA AV +GI A R++ +G +
Sbjct: 248 QMLKDEAGLRLSVEGHTDNTGAPARNRPLSEERARAVVAALTQQGIDAKRLEAKGFGADK 307
Query: 133 PSVYGHDEDAYAKNRRAIVF 152
P ++ A+NRR +
Sbjct: 308 PVADNASDEGRARNRRVELV 327
>gi|255019372|ref|ZP_05291483.1| outer membrane porin OprF [Acidithiobacillus caldus ATCC 51756]
gi|254971192|gb|EET28643.1| outer membrane porin OprF [Acidithiobacillus caldus ATCC 51756]
Length = 226
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 52/135 (38%), Gaps = 5/135 (3%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-WLE 77
+G+ + + +F + FD + ++RP ++ + L +
Sbjct: 8 TGLVTTNLTPVDSAGMTAALQGPGKFDMHLP----FDYNKATLRPDALKTVGELAQTMRQ 63
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
++GH D +G + + L RA AV VA+GI ASR+ G P
Sbjct: 64 NPQLFIGLDGHTDNIGGTDFNQKLSEARANAVKAALVAQGIDASRIATRGLGATQPVADN 123
Query: 138 HDEDAYAKNRRAIVF 152
+ AKNRR V
Sbjct: 124 ATDAGRAKNRRVEVV 138
>gi|213967534|ref|ZP_03395682.1| motB protein [Pseudomonas syringae pv. tomato T1]
gi|301382871|ref|ZP_07231289.1| flagellar motor protein MotD [Pseudomonas syringae pv. tomato
Max13]
gi|302062803|ref|ZP_07254344.1| flagellar motor protein MotD [Pseudomonas syringae pv. tomato K40]
gi|302131302|ref|ZP_07257292.1| flagellar motor protein MotD [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|213927835|gb|EEB61382.1| motB protein [Pseudomonas syringae pv. tomato T1]
Length = 295
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 19/127 (14%), Positives = 44/127 (34%), Gaps = 4/127 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ + + S+ F + ++ + +++ D +EG D+
Sbjct: 118 SDQMTVRGNELWIEIELNSSLLFVSGDAMPSDKAFTIIEKVSGIVKRFDNPIHVEGFTDD 177
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
++ L R+ ++ GI+ +R+ YG+ P AKNR
Sbjct: 178 QPISTAQFPTNWELSSARSASIVRMLAMDGINPARLASVGYGEFQPIAPNTTAAGRAKNR 237
Query: 148 RAIVFLK 154
R ++ +
Sbjct: 238 RVVLVIS 244
>gi|119900180|ref|YP_935393.1| hypothetical protein azo3891 [Azoarcus sp. BH72]
gi|119672593|emb|CAL96507.1| putative outer membrane protein [Azoarcus sp. BH72]
Length = 434
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 51/126 (40%), Gaps = 5/126 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ ++ L ++ + F+ +S ++ P + +++ +G + + L+ GH+D+
Sbjct: 304 EGLVTVRDLPDRSVVQIQGDGLFEPASATLAPRVLPLMARIGEAVARVKGSVLVRGHSDD 363
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
S+ L RA +V + A R++ + P + A+NR
Sbjct: 364 RPIRSARFPSNWHLSQARADSVAAVLAPQLGGA-RIETEGRAESEPVASNDTPEGRARNR 422
Query: 148 RAIVFL 153
R + +
Sbjct: 423 RVEIIV 428
>gi|328473002|gb|EGF43850.1| putative lipoprotein [Vibrio parahaemolyticus 10329]
Length = 219
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
V + + Q + + + F +SSY + + L + +E D +I+G+ D
Sbjct: 93 SGVQVQRVGENQLLLRMENGIGFSSSSYQLDASIHNTLRGVARILVEYPDTSLVIDGYTD 152
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + + L RRA +V + V++ ++ R YG+ P + A NRR
Sbjct: 153 STGSESYNQTLSERRAESVRQFLVSQKVAPGRAIARGYGERNPICSNQTSEGRACNRRVE 212
Query: 151 VFL 153
+ +
Sbjct: 213 IQI 215
>gi|291483903|dbj|BAI84978.1| flagellar motor protein MotB [Bacillus subtilis subsp. natto
BEST195]
Length = 260
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 48/128 (37%), Gaps = 6/128 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+ L E ++ DS+FFD+ +IR D+ + + + + + +I GH D
Sbjct: 122 EHQLETKMTSEGLLITIKDSIFFDSGKATIRKEDVPLAKEISNLLVINPPRNIIISGHTD 181
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ S+ L + RA + A YG+ P + +K
Sbjct: 182 NMPIKNSEFQSNWHLSVMRAVNFMGLLIENPKLDAKVFSAKGYGEYKPVASNKTAEGRSK 241
Query: 146 NRRAIVFL 153
NRR V +
Sbjct: 242 NRRVEVLI 249
>gi|251772419|gb|EES52986.1| putative flagellar motor protein (OmpA/MotB) [Leptospirillum
ferrodiazotrophum]
Length = 285
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 33/130 (25%), Positives = 50/130 (38%), Gaps = 4/130 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ E + + F T ++R I VL N+ + L K D +EGH D +
Sbjct: 102 GAMKVVQSSEGIRIQIQAAFLFRTGHAAVRKQAIPVLKNIAALLSKTKRDIRVEGHTDNV 161
Query: 93 GSR---NSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
++ AL RA V +A I SR YG+ P V + KNRR
Sbjct: 162 PIHGRYKNNWALSSMRAVNVLTTLIALAPIDPSRASAAGYGQYRPLVPNTSAENRQKNRR 221
Query: 149 AIVFLKGCRA 158
+ + +A
Sbjct: 222 VEIVVLKEKA 231
>gi|217034805|ref|ZP_03440196.1| hypothetical protein HP9810_866g2 [Helicobacter pylori 98-10]
gi|216942664|gb|EEC22235.1| hypothetical protein HP9810_866g2 [Helicobacter pylori 98-10]
Length = 157
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 64/142 (45%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
A+ +S + + + S ++ S++FD Y I+ +D + L
Sbjct: 14 AVQSAPVSTETVQEKQEPKQEPAPVVEERPAVESGTIIASIYFDFDKYEIKESDQETLDE 73
Query: 72 LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
+ +++ L+EG+ DE GS + ALG++R +V N V +G+ +K S+G+
Sbjct: 74 IVQKAKENHMQVLLEGNTDEFGSSEYNQALGVKRTLSVKNALVIKGVEKDMIKTISFGET 133
Query: 132 MPSVYGHDEDAYAKNRRAIVFL 153
P + Y +NRR V L
Sbjct: 134 KPKCTQKTRECYKENRRVDVKL 155
>gi|212633550|ref|YP_002310075.1| OmpA protein [Shewanella piezotolerans WP3]
gi|212555034|gb|ACJ27488.1| OmpA [Shewanella piezotolerans WP3]
Length = 222
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 57/135 (42%), Gaps = 1/135 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKH 79
+ + + + ++ + + ++ + V F + QVL+++ E
Sbjct: 85 VQEAELRKQLQSSGVSVTRSGDTIILNMPNDVTFGVDQTDLSQRAKQVLNSVALVALEYD 144
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ + GH D G+ + ++ L RA V +Y ++R + ++R+ G++ P
Sbjct: 145 ETKLNVMGHTDSSGAASYNMRLSQVRASEVASYLMSRKVPSARVVSHGVGEDRPVASNET 204
Query: 140 EDAYAKNRRAIVFLK 154
+ A+NRR + L
Sbjct: 205 KAGRAENRRVEIILS 219
>gi|197295086|ref|YP_002153627.1| putative outer membrane protein [Burkholderia cenocepacia J2315]
gi|195944565|emb|CAR57169.1| putative outer membrane protein [Burkholderia cenocepacia J2315]
Length = 220
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLR 104
S+ +F T S + PA L L + ++H ++G+ D GS + AL R
Sbjct: 110 VSLTGDAYFATDSAVLTPAATATLDKLLNQQGDRHFARVEVDGYTDATGSDAHNQALSKR 169
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RA AV Y G+ A +G+ P+ + A+NRR + L+
Sbjct: 170 RADAVAGYLREHGLKADSFAANGHGEANPAASNDTVEGRARNRRVEISLQ 219
>gi|126664582|ref|ZP_01735566.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Marinobacter sp. ELB17]
gi|126630908|gb|EBA01522.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Marinobacter sp. ELB17]
Length = 373
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 52/142 (36%), Gaps = 5/142 (3%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLE 77
+D+ D ++ + + E ++ V F +S I A + + L
Sbjct: 232 VDSKDKCPNTAAGMKVDKDGCEGVVKTIDTFEIDVQFPLNSAEIGAAYDSQIRRVADALR 291
Query: 78 KHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSV 135
+ I GH D G+ + L RRA AV N + ++ R+ YG+ P
Sbjct: 292 ANSTTYVEIAGHTDSTGAAAYNQDLSERRAAAVANRLTSTLDVNPDRVSSKGYGEAEPIA 351
Query: 136 YGHDEDAYAKNRRAIVFLKGCR 157
+ A NRR ++ R
Sbjct: 352 SNSTDAGRAANRRVEARIQVRR 373
>gi|238783322|ref|ZP_04627346.1| hypothetical protein yberc0001_32980 [Yersinia bercovieri ATCC
43970]
gi|238715745|gb|EEQ07733.1| hypothetical protein yberc0001_32980 [Yersinia bercovieri ATCC
43970]
Length = 403
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 4/134 (2%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
++ + +Q ++ FD+ +IRPA QV++++G+ L ++ G++D
Sbjct: 262 ASGMVVVRTDDKQSVIALRGDGLFDSGMITIRPAYNQVINHIGNALNGVSGKIMVTGYSD 321
Query: 91 ELG----SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ + S+ AL L RA AV + SA R+K G+ P + A N
Sbjct: 322 NVPIRKSTFTSNSALSLARANAVGSQLQKYLDSAQRVKTEGRGEANPVAPNDSKKDRALN 381
Query: 147 RRAIVFLKGCRANT 160
RR + L NT
Sbjct: 382 RRVEITLLVPPENT 395
>gi|330876044|gb|EGH10193.1| flagellar motor protein MotD [Pseudomonas syringae pv. morsprunorum
str. M302280PT]
Length = 295
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 19/127 (14%), Positives = 44/127 (34%), Gaps = 4/127 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ + + S+ F + ++ + +++ D +EG D+
Sbjct: 118 SDQMTVRGNELWIEIELNSSLLFVSGDAMPSDKAFTIIEKVSGIVKRFDNPIHVEGFTDD 177
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
++ L R+ ++ GI+ +R+ YG+ P AKNR
Sbjct: 178 QPISTAQFPTNWELSSARSASIVRMLAMDGINPARLASVGYGEFQPIAPNTTAAGRAKNR 237
Query: 148 RAIVFLK 154
R ++ +
Sbjct: 238 RVVLVIS 244
>gi|262198395|ref|YP_003269604.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
gi|262081742|gb|ACY17711.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
Length = 193
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 48/117 (41%), Gaps = 2/117 (1%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD--CDFLIEGHADELGSRN 96
++ + V F+ + +L + + + + +EGH D G N
Sbjct: 70 AVLRDDRIEIMQQVQFEFGKAVLLEESKSLLDEVAAIMRDNPQIAKIRVEGHTDSKGKAN 129
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L RA +V Y +++G++ +R+ +G P +D A+NRR +
Sbjct: 130 FNLRLSRERAASVRAYLISQGVAGNRLVARGFGMTKPIDSNDTDDGRARNRRVEFNI 186
>gi|28869189|ref|NP_791808.1| motB protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|28852429|gb|AAO55503.1| motB protein [Pseudomonas syringae pv. tomato str. DC3000]
Length = 295
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 19/127 (14%), Positives = 44/127 (34%), Gaps = 4/127 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ + + S+ F + ++ + +++ D +EG D+
Sbjct: 118 SDQMTVRGNELWIEIELNSSLLFVSGDAMPSDKAFTIIEKVSGIVKRFDNPIHVEGFTDD 177
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
++ L R+ ++ GI+ +R+ YG+ P AKNR
Sbjct: 178 QPISTAQFPTNWELSSARSASIVRMLAMDGINPARLASVGYGEFQPIAPNTTAAGRAKNR 237
Query: 148 RAIVFLK 154
R ++ +
Sbjct: 238 RVVLVIS 244
>gi|260062849|ref|YP_003195929.1| OmpA family protein [Robiginitalea biformata HTCC2501]
gi|88784417|gb|EAR15587.1| OmpA family protein [Robiginitalea biformata HTCC2501]
Length = 231
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 36/132 (27%), Positives = 57/132 (43%), Gaps = 3/132 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDS--VFFDTSSYSIRPADIQVLSNLGSWLEKH 79
D KI + E + + V F T+ +I A + L+ L +++
Sbjct: 80 DRQAEKIEEELPGAEVKRVGEGINVTFTQDQGVHFATNQSAIEGASVTTLNKLAGIFKEY 139
Query: 80 DCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ +EGH D G + +++L RRA +V NY VA+GI R V YG+ P
Sbjct: 140 PKSVILVEGHTDSAGPEDYNMSLSQRRAESVVNYLVAQGIDKDRFTVRWYGETQPRADNS 199
Query: 139 DEDAYAKNRRAI 150
+ A+NRR
Sbjct: 200 TAEGKAQNRRVE 211
>gi|332666217|ref|YP_004449005.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332335031|gb|AEE52132.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 595
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 29/148 (19%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
L ++ + S I + D + D + E+ ++ ++ + F + S P+ V
Sbjct: 451 FLKSVLSRAGSNIASADEAEFNADDNIRETVSKKSWA------IEFASGSSEFTPSARAV 504
Query: 69 LSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR---GISASRMK 124
+ L + + + + GH D +G ++++L RRA+A+ + + R+
Sbjct: 505 MEQLFNDLVIASNLKVEVHGHTDNIGDPAANLSLSERRAFAIKTWLENKSANNFPEGRVS 564
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ S+G P AKNRR +
Sbjct: 565 IFSHGASNPVASNDTPAGRAKNRRVEII 592
>gi|319638563|ref|ZP_07993325.1| hypothetical protein HMPREF0604_00949 [Neisseria mucosa C102]
gi|317400312|gb|EFV80971.1| hypothetical protein HMPREF0604_00949 [Neisseria mucosa C102]
Length = 226
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHA 89
+T + Q + ++V F T S ++ LS ++ D I GH
Sbjct: 89 ANTNIEVERQGNQIKLVMPENVTFATGSAALSGQAQSALSAAAQTLVQYPDTTLTINGHT 148
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G+ + L RA +V + +RG+S++R+ YG P + A+NRR
Sbjct: 149 DNTGNDAINEPLSRNRAESVATFLQSRGVSSTRLSTFGYGSRQPIASNATVEGRAQNRRV 208
Query: 150 IVFL 153
+ +
Sbjct: 209 EILI 212
>gi|310817591|ref|YP_003949949.1| outer membrane protein [Stigmatella aurantiaca DW4/3-1]
gi|309390663|gb|ADO68122.1| outer membrane protein [Stigmatella aurantiaca DW4/3-1]
Length = 632
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 12/149 (8%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFS--------SSVGDSVFFDTSSYSIRPADIQVLSNLG 73
D+LD + V N+ +Q + ++V+FD+++ +I+ +L +
Sbjct: 480 DHLDNCPNEAGPVDNQGCPAKQKQLVAIRQDRIEIKEAVYFDSNASTIQARSNGLLDQMA 539
Query: 74 SWLEKHD--CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
L +H LIEGH D+ G+ + + L +RA V +Y V +G++A R++ YG +
Sbjct: 540 KLLNEHPEIVSVLIEGHTDDRGAADYNRTLSKQRADTVRDYLVKKGVAAERLETQGYGPD 599
Query: 132 MPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
P NRR + ANT
Sbjct: 600 RPVQPNTTAAGRTANRRVDFLTR--YANT 626
>gi|262281137|ref|ZP_06058919.1| outer membrane protein A [Acinetobacter calcoaceticus RUH2202]
gi|262257368|gb|EEY76104.1| outer membrane protein A [Acinetobacter calcoaceticus RUH2202]
Length = 352
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 56/141 (39%), Gaps = 5/141 (3%)
Query: 20 GIDNLDTKISSPDTVLNESS-LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LE 77
++ P V + L E + + VFFDT+ +I+ ++ + E
Sbjct: 203 AAPVVEVAPVEPTPVAPQPQELTEDLNMEL--RVFFDTNKSNIKDQYKPEIAKVAEKLTE 260
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVY 136
+ IEGH D G R + L L RA +V + V + ASR+ + + P
Sbjct: 261 YPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIAD 320
Query: 137 GHDEDAYAKNRRAIVFLKGCR 157
++ A NRR + G R
Sbjct: 321 NKTKEGRAMNRRVFATITGSR 341
>gi|194364578|ref|YP_002027188.1| OmpA/MotB domain-containing protein [Stenotrophomonas maltophilia
R551-3]
gi|194347382|gb|ACF50505.1| OmpA/MotB domain protein [Stenotrophomonas maltophilia R551-3]
Length = 362
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 54/139 (38%), Gaps = 8/139 (5%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDF 83
D +S S V FD ++RP + +LS L+++
Sbjct: 224 DKCPNSQPGQTIGPDGCPVPVSIDLKGVNFDFDKSNLRPDAVAILSEATEILKRYPDLRV 283
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYG----- 137
+ GH D G+ + L RRA AV+NY G+ A R+ YG+ P
Sbjct: 284 EVAGHTDSKGTDAYNQKLSERRATAVYNYLTKNGVDAGRLVGPIGYGESRPIAPNTNPDG 343
Query: 138 -HDEDAYAKNRRAIVFLKG 155
+ + AKNRR + ++
Sbjct: 344 SDNPEGRAKNRRTELNVQN 362
>gi|115373807|ref|ZP_01461100.1| thrombospondin type 3 repeat family [Stigmatella aurantiaca
DW4/3-1]
gi|115369206|gb|EAU68148.1| thrombospondin type 3 repeat family [Stigmatella aurantiaca
DW4/3-1]
Length = 663
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 12/149 (8%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFS--------SSVGDSVFFDTSSYSIRPADIQVLSNLG 73
D+LD + V N+ +Q + ++V+FD+++ +I+ +L +
Sbjct: 511 DHLDNCPNEAGPVDNQGCPAKQKQLVAIRQDRIEIKEAVYFDSNASTIQARSNGLLDQMA 570
Query: 74 SWLEKHD--CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
L +H LIEGH D+ G+ + + L +RA V +Y V +G++A R++ YG +
Sbjct: 571 KLLNEHPEIVSVLIEGHTDDRGAADYNRTLSKQRADTVRDYLVKKGVAAERLETQGYGPD 630
Query: 132 MPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
P NRR + ANT
Sbjct: 631 RPVQPNTTAAGRTANRRVDFLTR--YANT 657
>gi|16078432|ref|NP_389251.1| flagellar motor protein MotB [Bacillus subtilis subsp. subtilis
str. 168]
gi|221309232|ref|ZP_03591079.1| flagellar motor protein MotB [Bacillus subtilis subsp. subtilis
str. 168]
gi|221313560|ref|ZP_03595365.1| flagellar motor protein MotB [Bacillus subtilis subsp. subtilis
str. NCIB 3610]
gi|221318482|ref|ZP_03599776.1| flagellar motor protein MotB [Bacillus subtilis subsp. subtilis
str. JH642]
gi|221322755|ref|ZP_03604049.1| flagellar motor protein MotB [Bacillus subtilis subsp. subtilis
str. SMY]
gi|321315123|ref|YP_004207410.1| flagellar motor protein MotB [Bacillus subtilis BSn5]
gi|127250|sp|P28612|MOTB_BACSU RecName: Full=Motility protein B; AltName: Full=Chemotaxis protein
MotB
gi|143208|gb|AAA22603.1| motility protein B [Bacillus subtilis]
gi|2633739|emb|CAB13241.1| motility protein B; MotB component of the stator flagellum complex
[Bacillus subtilis subsp. subtilis str. 168]
gi|320021397|gb|ADV96383.1| flagellar motor protein MotB [Bacillus subtilis BSn5]
Length = 261
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 48/128 (37%), Gaps = 6/128 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+ L E ++ DS+FFD+ +IR D+ + + + + + +I GH D
Sbjct: 123 EHQLETKMTSEGLLITIKDSIFFDSGKATIRKEDVPLAKEISNLLVINPPRNIIISGHTD 182
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ S+ L + RA + A YG+ P + +K
Sbjct: 183 NMPIKNSEFQSNWHLSVMRAVNFMGLLIENPKLDAKVFSAKGYGEYKPVASNKTAEGRSK 242
Query: 146 NRRAIVFL 153
NRR V +
Sbjct: 243 NRRVEVLI 250
>gi|325275242|ref|ZP_08141202.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51]
gi|324099634|gb|EGB97520.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51]
Length = 231
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 57/134 (42%), Gaps = 3/134 (2%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK--HDC 81
+ + V+ E + E+ V V F+ S + D + L+ + + L++
Sbjct: 97 ANGCPPAAPAVVEEVVVVEKEEVIVIRDVHFEFDSARLTATDKERLNTIATRLKQEAPSA 156
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDE 140
+ GH D +GS + + L RRA++V +Y + +S + V G+ P
Sbjct: 157 RLSVSGHTDSVGSDSYNQKLSERRAHSVTDYLVQSGVPRSSFVSVVGAGETQPVADNATA 216
Query: 141 DAYAKNRRAIVFLK 154
+ A NRR + ++
Sbjct: 217 EGRAMNRRTEIKIQ 230
>gi|269836612|ref|YP_003318840.1| OmpA/MotB domain-containing protein [Sphaerobacter thermophilus DSM
20745]
gi|269785875|gb|ACZ38018.1| OmpA/MotB domain protein [Sphaerobacter thermophilus DSM 20745]
Length = 233
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 33/152 (21%), Positives = 58/152 (38%), Gaps = 9/152 (5%)
Query: 7 FIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADI 66
F+ AI S + D + + D L QE + +SV F +RP
Sbjct: 79 FMSFLAIRAQIASLVQRYDLGLDAADVEL----TQEGIVIHLAESVLFPPGEVQLRPEAH 134
Query: 67 QVLSNLGSWLEKHDCDFLIEGHADE----LGSRNSSIALGLRRAYAVFNYFVA-RGISAS 121
+VL+++ + + +EGH D + + AL RA + + +G+ A
Sbjct: 135 RVLADIAAIIGPMPFPVRVEGHTDNVPPANPNYPDNWALSTMRAVSTVRFLSDVQGVPAE 194
Query: 122 RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
R+ Y + P + KNRR + +
Sbjct: 195 RLVAVGYAEHRPRADNRTLEGRRKNRRVDLVI 226
>gi|33600833|ref|NP_888393.1| putative lipoprotein [Bordetella bronchiseptica RB50]
gi|33568433|emb|CAE32345.1| putative lipoprotein [Bordetella bronchiseptica RB50]
Length = 200
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 58/143 (40%), Gaps = 7/143 (4%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
IS + +++ ++ ++ + ++ V FD I A L ++ ++
Sbjct: 55 ISDLSAQVGALAARHEGVSVRQGKDAVTIAMMGDVLFDFDKADILAAAEPTLQDIAKLIK 114
Query: 78 KHDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ IEGH D GS + + L LRRA AV + A G+ A+++ V G P
Sbjct: 115 SPATGIVAIEGHTDSKGSDSYNKGLSLRRAQAVAQWLGAHGVDAAKLSVRGLGAARPVQP 174
Query: 137 G------HDEDAYAKNRRAIVFL 153
+ A+NRR L
Sbjct: 175 NQLANGADNPQGRAQNRRVEFVL 197
>gi|153877096|ref|ZP_02004079.1| OmpA domain protein [Beggiatoa sp. PS]
gi|152066440|gb|EDN65921.1| OmpA domain protein [Beggiatoa sp. PS]
Length = 155
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 55/139 (39%), Gaps = 2/139 (1%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL- 76
++ D++ + + + +V FDT+ ++ + + ++
Sbjct: 8 VNNCDDMCAGTPFGSQIETTGCRILEVPEEITLTVLFDTNKSMVKSEYYAEIQQVSDFMA 67
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSV 135
+ I+GH D GS + ++ L +RA AV +++ SR+ YG+ P
Sbjct: 68 KYPSTSTEIQGHTDSSGSDDYNLNLSQQRADAVLEVLISQFNISPSRLAAVGYGESQPIA 127
Query: 136 YGHDEDAYAKNRRAIVFLK 154
+ +NRR + ++
Sbjct: 128 DNSTREGRQQNRRVVARIE 146
>gi|315082132|gb|EFT54108.1| OmpA family protein [Propionibacterium acnes HL078PA1]
Length = 368
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 49/136 (36%), Gaps = 2/136 (1%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW--LEK 78
++ L T E +E + SV FD S ++PA Q++ K
Sbjct: 231 VNALVTTTGDASDASREWVTKESMKIDLDASVLFDLDSDVVKPAGRQIIDRTAKQLVARK 290
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ G+ D GS + ++ L RRA +V ++ + G+ P
Sbjct: 291 VSGKIEVTGYTDSSGSASHNLDLSRRRAASVAKVLGSQLSKGITLVTAGKGEADPVTSND 350
Query: 139 DEDAYAKNRRAIVFLK 154
E NRR + +K
Sbjct: 351 SEAGRRLNRRVTITVK 366
>gi|262279684|ref|ZP_06057469.1| OmpA/MotB [Acinetobacter calcoaceticus RUH2202]
gi|262260035|gb|EEY78768.1| OmpA/MotB [Acinetobacter calcoaceticus RUH2202]
Length = 473
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 29/148 (19%), Positives = 59/148 (39%), Gaps = 6/148 (4%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSV-----GDSVFFDTSSYSIRPADI 66
+ ++ ++ +S+ T L +++ + F + S I +
Sbjct: 324 VVAAAPVTAEQSVSNSLSASQTALTAIDPNNVDVNALVKALNLQIINFASGSSEIPADNK 383
Query: 67 QVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
+L + + + GH D G+ S+ AL RRA AV +Y ++G+ AS++
Sbjct: 384 AILDQAVTLLNKVSGVKLNVGGHTDSTGNAASNKALSQRRAQAVVDYLTSKGVDASKLVA 443
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+G + P ++ KNRR +
Sbjct: 444 QGHGSDQPVAENTTDEGRFKNRRIEFSV 471
>gi|117620195|ref|YP_854667.1| putative outer membrane lipoprotein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117561602|gb|ABK38550.1| inner membrane lipoprotein YiaD [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 218
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHA 89
T ++ + +Q ++ ++V FD+SS ++ A LS + + E + GH
Sbjct: 91 QGTGVSVTRNGDQLILNMPNNVTFDSSSAQLKAAGANTLSGVAMVVGEFDKTRLNVVGHT 150
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GSR ++ L +RA AV + +G++ SR+ + G + P + A+NRR
Sbjct: 151 DSTGSRELNMKLSAQRADAVAAQLIGQGVTGSRISTSGVGPDQPVATNSTAEGKAQNRRV 210
Query: 150 IVFL 153
+ L
Sbjct: 211 TITL 214
>gi|30314426|gb|AAP15422.1| outer membrane lipoprotein precursor [Burkholderia ambifaria]
gi|30314428|gb|AAP15423.1| outer membrane lipoprotein precursor [Burkholderia ambifaria]
gi|30314452|gb|AAP15435.1| outer membrane lipoprotein precursor [Burkholderia ambifaria]
Length = 149
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 43/136 (31%), Positives = 72/136 (52%), Gaps = 2/136 (1%)
Query: 19 SGIDNLDTKISSPDTV-LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
+ + T+ S+ + +N L + S S++FD SYS++ ++ +L+
Sbjct: 11 ANAGAVSTQPSADNVAQVNVDPLNDPNSPLAKRSIYFDFDSYSVKDEYQPLMQQHAQYLK 70
Query: 78 KHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
H LI+G+ DE G+ ++ALG +RA AV G++ S+M+ S GKE P
Sbjct: 71 SHPQRHVLIQGNTDERGTSEYNLALGQKRAEAVRRAMALLGVNDSQMEAVSLGKEKPQAS 130
Query: 137 GHDEDAYAKNRRAIVF 152
GHDE ++A+NRRA +
Sbjct: 131 GHDEASWAQNRRADLV 146
>gi|330964668|gb|EGH64928.1| flagellar motor protein MotD [Pseudomonas syringae pv. actinidiae
str. M302091]
Length = 295
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 20/127 (15%), Positives = 44/127 (34%), Gaps = 4/127 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ + + S+ F + ++ + +++ D +EG D+
Sbjct: 118 SDQMTVRGNELWIEIELNSSLLFVSGDAMPSDKAFTIIEKVSGIVKRFDNPIHVEGFTDD 177
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
++ L RA ++ GI+ +R+ YG+ P AKNR
Sbjct: 178 QPISTAQFPTNWELSSARAASIVRMLAMDGINPARLASVGYGEFQPIAPNTTAAGRAKNR 237
Query: 148 RAIVFLK 154
R ++ +
Sbjct: 238 RVVLVIS 244
>gi|129307154|gb|ABO30515.1| outer membrane protein A [Acinetobacter baumannii]
Length = 340
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 56/141 (39%), Gaps = 5/141 (3%)
Query: 20 GIDNLDTKISSPDTVLNESS-LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LE 77
++ P V + L E + + VFFDT+ +I+ ++ + E
Sbjct: 201 AAPVVEVAPVEPTPVAPQPQELTEDLNMEL--RVFFDTNKSNIKDQYKPEIAKVAEKLSE 258
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVY 136
+ IEGH D G R + L L RA +V + V + ASR+ + + P
Sbjct: 259 YPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIAD 318
Query: 137 GHDEDAYAKNRRAIVFLKGCR 157
++ A NRR + G R
Sbjct: 319 NKTKEGRAMNRRVFATITGSR 339
>gi|28898041|ref|NP_797646.1| putative lipoprotein [Vibrio parahaemolyticus RIMD 2210633]
gi|308094661|ref|ZP_05890745.2| outer membrane protein [Vibrio parahaemolyticus AN-5034]
gi|308095662|ref|ZP_05907484.2| outer membrane protein [Vibrio parahaemolyticus Peru-466]
gi|308125455|ref|ZP_05775378.2| outer membrane protein [Vibrio parahaemolyticus K5030]
gi|308126686|ref|ZP_05911817.2| outer membrane protein [Vibrio parahaemolyticus AQ4037]
gi|28806255|dbj|BAC59530.1| putative lipoprotein [Vibrio parahaemolyticus RIMD 2210633]
gi|308088657|gb|EFO38352.1| outer membrane protein [Vibrio parahaemolyticus Peru-466]
gi|308091164|gb|EFO40859.1| outer membrane protein [Vibrio parahaemolyticus AN-5034]
gi|308107632|gb|EFO45172.1| outer membrane protein [Vibrio parahaemolyticus AQ4037]
gi|308115580|gb|EFO53120.1| outer membrane protein [Vibrio parahaemolyticus K5030]
Length = 222
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
V + + Q + + + F +SSY + + L + +E D +I+G+ D
Sbjct: 96 SGVQVQRVGENQLLLRMENGIGFSSSSYQLDASIHNTLRGVARILVEYPDTSLVIDGYTD 155
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + + L RRA +V + V++ ++ R YG+ P + A NRR
Sbjct: 156 STGSESYNQTLSERRAESVRQFLVSQKVAPGRAIARGYGERNPICSNQTSEGRACNRRVE 215
Query: 151 VFL 153
+ +
Sbjct: 216 IQI 218
>gi|85714376|ref|ZP_01045364.1| OmpA/MotB [Nitrobacter sp. Nb-311A]
gi|85698823|gb|EAQ36692.1| OmpA/MotB [Nitrobacter sp. Nb-311A]
Length = 154
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 51/141 (36%), Positives = 76/141 (53%), Gaps = 3/141 (2%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+M + + + +D + Q+ F +VGD VFF++ S+ P I L
Sbjct: 12 SMGACANKNPMDGRGGM--AGAAAPGSQQDFVVNVGDRVFFESDQTSLSPQAITTLEKQA 69
Query: 74 SWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
WL+ ++ F IEGHADE G+R +IALG RRA V ++ +RGI RM+ SYGKE
Sbjct: 70 RWLQTYNRYSFTIEGHADERGTREYNIALGARRAQTVRSFLASRGIDPGRMRTISYGKER 129
Query: 133 PSVYGHDEDAYAKNRRAIVFL 153
P +D +++NRRA+ L
Sbjct: 130 PVAVCNDISCWSQNRRAVTVL 150
>gi|294783516|ref|ZP_06748840.1| outer membrane protein OprF [Fusobacterium sp. 1_1_41FAA]
gi|294480394|gb|EFG28171.1| outer membrane protein OprF [Fusobacterium sp. 1_1_41FAA]
Length = 102
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 1/99 (1%)
Query: 56 TSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA 115
++P ++L+NL ++E+++ + IEGH D +GS +I L RRA AV +
Sbjct: 1 FDKSVVKPQYFEMLNNLKDFIEQNNYELTIEGHTDSVGSNQYNIGLSRRRAEAVKAKLIE 60
Query: 116 RGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G+ R+ + + G+E P + +NRR L
Sbjct: 61 FGLPEDRIVGIEAKGEEYPVATNETPEGRLQNRRVEFRL 99
>gi|167583745|ref|ZP_02376133.1| hypothetical protein BuboB_00307 [Burkholderia ubonensis Bu]
Length = 405
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 46/131 (35%), Gaps = 4/131 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ +++ ++ + F + + S+ + VL+ + L K + +
Sbjct: 260 EPEIAAGLVSVRDDADRSVIVLRGDGLFQSGATSVIDRYLPVLARVADALNKVPGNVRVS 319
Query: 87 GHADELGSRN----SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
G+ D+ S+ L RA +V + AR R+ G P
Sbjct: 320 GYTDDTPVHTARFASNWDLSRERAESVRSLLAARLDRPERLAAQGRGTLDPVAPNDTPAN 379
Query: 143 YAKNRRAIVFL 153
A+NRR + L
Sbjct: 380 RARNRRVEITL 390
>gi|30314436|gb|AAP15427.1| outer membrane lipoprotein precursor [Burkholderia anthina]
Length = 150
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 44/137 (32%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 18 ISGIDNLDTKISSPDTV-LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+ + T+ S+ + +N L + S S++FD SYS++ +L +L
Sbjct: 11 ANNAGAMSTQPSADNVAQVNVDPLNDPNSPLAKRSIYFDFDSYSVKDEYQPLLQQHAQYL 70
Query: 77 EKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+ H LI+G+ DE G+ ++ALG +RA AV G++ S+M+ S GKE P
Sbjct: 71 KSHPQRHVLIQGNTDERGTSEYNLALGQKRAEAVRRAMALLGVNDSQMEAVSLGKEKPQA 130
Query: 136 YGHDEDAYAKNRRAIVF 152
GHDE ++A+NRRA +
Sbjct: 131 TGHDEASWAQNRRADLV 147
>gi|34541639|ref|NP_906118.1| lipoprotein PG3 [Porphyromonas gingivalis W83]
gi|5081699|gb|AAD39495.1|AF145799_1 immunogenic 23 kDa lipoprotein PG3 [Porphyromonas gingivalis]
gi|34397957|gb|AAQ67017.1| lipoprotein PG3 [Porphyromonas gingivalis W83]
Length = 223
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG-SWLEKHD 80
+ + + PD + + E + + F T+S ++ P L+ + + D
Sbjct: 75 QKKELEAAVPDATIQTVNDGEAILVTFDSGILFATNSSTLSPNSRTALTKFAANMNKNPD 134
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
D I GH D GS + L RRA +V+++ ++G+S SRM G P
Sbjct: 135 TDIRIVGHTDNTGSDKINDPLSERRAASVYSFLNSQGVSMSRMAAEGRGSHEPVADNSTV 194
Query: 141 DAYAKNRRAIVFL 153
+ NRR V++
Sbjct: 195 AGRSANRRVEVYI 207
>gi|149909453|ref|ZP_01898108.1| outer membrane protein [Moritella sp. PE36]
gi|149807563|gb|EDM67512.1| outer membrane protein [Moritella sp. PE36]
Length = 214
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 1/114 (0%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSI 99
+ + + + F T+ Y++ L+++ E I GH D +GS S++
Sbjct: 98 ENELQLIMAKGIGFQTAGYNLSGDIYSSLNSVAKILNEYPKSSLRIVGHTDSVGSAQSNL 157
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V Y RGI + R+ YG+ P + A NRR + +
Sbjct: 158 TLSEERAESVSEYLNKRGIKSGRLSTRGYGERRPIASNETKSGRAANRRVEISI 211
>gi|329945590|ref|ZP_08293324.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386]
gi|328528682|gb|EGF55644.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386]
Length = 321
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 54/140 (38%), Gaps = 2/140 (1%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC- 81
L+T +S D + + + ++ V FD+ S + L L +
Sbjct: 152 ALETFTASVDGASDTRVTGKSVTITLASDVLFDSDSADLSAQADTTLKKAADQLSTYPGG 211
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDE 140
I GH D++ + L RRA AV + +SA + V+ G+ P V +
Sbjct: 212 QVTIVGHTDDVADDAHNQDLSQRRAQAVSDRLGQLASMSAYSVSVSGKGESEPRVPNDSD 271
Query: 141 DAYAKNRRAIVFLKGCRANT 160
+ NRR + L + ++
Sbjct: 272 ENRQLNRRVEITLVPTQESS 291
>gi|253999219|ref|YP_003051282.1| OmpA/MotB domain-containing protein [Methylovorus sp. SIP3-4]
gi|253985898|gb|ACT50755.1| OmpA/MotB domain protein [Methylovorus sp. SIP3-4]
Length = 222
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 52/135 (38%), Gaps = 1/135 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
+ ++ V + + + + FD+ I+P VL + +
Sbjct: 77 EQKQQMEQATAGTGVQVSQTADNRLKLDIPSDISFDSGKSDIKPNFRPVLDSFAQSLVAN 136
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
I GH D G+ + L L RA +Y V RG+++SR G P V +
Sbjct: 137 PATRVTIVGHTDNTGTDAVNNPLSLNRANHARDYLVTRGVASSRFTTEGRGSHEPLVENN 196
Query: 139 DEDAYAKNRRAIVFL 153
+ AKNRR +F+
Sbjct: 197 SDANRAKNRRVEIFV 211
>gi|332704881|ref|ZP_08424969.1| peptidoglycan-associated lipoprotein [Desulfovibrio africanus str.
Walvis Bay]
gi|332555030|gb|EGJ52074.1| peptidoglycan-associated lipoprotein [Desulfovibrio africanus str.
Walvis Bay]
Length = 198
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 43/195 (22%), Positives = 73/195 (37%), Gaps = 43/195 (22%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNES---------------------- 38
M TI ++L + +++ G + T
Sbjct: 4 MTRKTI-VVLFVLALLAGFGCAKKQVSSTPDQTSAAAQGEMTDGTPTDDEAARRAAEEEA 62
Query: 39 -------------------SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
++Q ++ + VFF SY + +VL L+
Sbjct: 63 YRRSELQDDQTGQTEQERLQAEQQAKQNINELVFFAYDSYELDSKAREVLQRKAQALKLM 122
Query: 80 D-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
I+G DE G+ ++ALG RRA A F++ V G++ +R+ + SYG++ P +
Sbjct: 123 PDTRVTIKGFCDERGTEEYNLALGERRARASFDFLVLMGVNPNRINIVSYGEDNPLDPAN 182
Query: 139 DEDAYAKNRRAIVFL 153
E AYAKNRR +
Sbjct: 183 SEAAYAKNRRCEFEI 197
>gi|163866826|gb|ABY47583.1| outer membrane protein A [Acinetobacter baumannii]
Length = 343
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 56/141 (39%), Gaps = 5/141 (3%)
Query: 20 GIDNLDTKISSPDTVLNESS-LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LE 77
++ P V + L E + + VFFDT+ +I+ ++ + E
Sbjct: 201 AAPVVEVAPVEPTPVAPQPQELTEDLNMEL--RVFFDTNKSNIKDQYKPEIAKVAEKLSE 258
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVY 136
+ IEGH D G R + L L RA +V + V + ASR+ + + P
Sbjct: 259 YPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIAD 318
Query: 137 GHDEDAYAKNRRAIVFLKGCR 157
++ A NRR + G R
Sbjct: 319 NKTKEGRAMNRRVFATITGSR 339
>gi|110640101|ref|YP_680311.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
gi|110282782|gb|ABG60968.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
Length = 670
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 46/115 (40%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSS 98
++ + + F ++ I + ++ + ++GH D G +
Sbjct: 555 PIESGQKVELKNVFFHQSTPNLIETSYPELDRMVEVLKTNPTVRIELDGHTDNQGDAALN 614
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+AL +R V Y V++GI R+ ++G P + E+ KNRR + +
Sbjct: 615 LALSEKRVETVKAYLVSKGIDNKRITTRAFGGTKPIAPNNTEENRKKNRRVEIII 669
>gi|253577343|ref|ZP_04854660.1| OmpA/MotB domain-containing protein [Paenibacillus sp. oral taxon
786 str. D14]
gi|251843243|gb|EES71274.1| OmpA/MotB domain-containing protein [Paenibacillus sp. oral taxon
786 str. D14]
Length = 269
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 43/133 (32%), Gaps = 6/133 (4%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLI 85
K + L Q Q ++ D F + ++P Q+ + + + D + ++
Sbjct: 119 KENGLTDDLETKLNQSQLMITISDKALFASGEAVVKPEARQLAKAISNMLQQFPDYEVIV 178
Query: 86 EGHADELGSRNSSIAL-----GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
GH D + +R + + + + YG+ P
Sbjct: 179 SGHTDNVPISTYEFPSNWDLSSVRALNFMKILLLNTNLDPKKFSAIGYGEYHPVASNDTA 238
Query: 141 DAYAKNRRAIVFL 153
A+NRR V +
Sbjct: 239 AGRAQNRRVEVSI 251
>gi|33595424|ref|NP_883067.1| hypothetical protein BPP0729 [Bordetella parapertussis 12822]
gi|33599804|ref|NP_887364.1| hypothetical protein BB0815 [Bordetella bronchiseptica RB50]
gi|33565502|emb|CAE40138.1| putative outer membrane protein [Bordetella parapertussis]
gi|33567401|emb|CAE31314.1| putative outer membrane protein [Bordetella bronchiseptica RB50]
Length = 426
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 49/132 (37%), Gaps = 4/132 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ D ++ ++ + F++ + ++R VL+ + L + D ++
Sbjct: 279 QPEVRDRLVTVRDEVDRSVVVLRGDGLFESGAVAVRDRYAPVLARVAEALGQTRGDIVVR 338
Query: 87 GHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
G+ D + S+ L RA AV AR A R++ G+ P
Sbjct: 339 GYTDNVPIRTARFPSNWHLSQARAEAVKAVIDARLGQAGRVRAEGRGEADPLAPNDTPAG 398
Query: 143 YAKNRRAIVFLK 154
+ NRR + +
Sbjct: 399 RSVNRRVEITVM 410
>gi|109900555|ref|YP_663810.1| OmpA/MotB [Pseudoalteromonas atlantica T6c]
gi|109702836|gb|ABG42756.1| OmpA/MotB [Pseudoalteromonas atlantica T6c]
Length = 215
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 59/150 (39%), Gaps = 7/150 (4%)
Query: 11 SAITMMSISGIDNLDTKISS------PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPA 64
+A+ ++ S I N K D+ + + + S+ F + + S+ +
Sbjct: 60 AAVGALAGSAIGNYMDKQEEEFREELADSGVEVYREGDTLRLYMPGSITFSSGNASVDSS 119
Query: 65 DIQVLSNLG-SWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
VL ++ + ++EGH D G+ + + L RA +V NY V G+ R+
Sbjct: 120 FYPVLKDVALVINKYEKTTLMVEGHTDNTGADDMNQRLSEARANSVKNYLVQNGVDNRRV 179
Query: 124 KVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G+ P + KNRR + +
Sbjct: 180 STLGMGEYTPIADNATQAGRQKNRRVELKI 209
>gi|311280379|ref|YP_003942610.1| peptidoglycan-associated lipoprotein [Enterobacter cloacae SCF1]
gi|308749574|gb|ADO49326.1| peptidoglycan-associated lipoprotein [Enterobacter cloacae SCF1]
Length = 173
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 53/172 (30%), Positives = 79/172 (45%), Gaps = 20/172 (11%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDTVLNESSLQE-------------- 42
MQ + + I L + + + S N S + + +
Sbjct: 1 MQLNKVLKGLMIALPVMAIAACSSNKNASNDQSGEGMMGAGTGMDANGNGNMSSEEQARL 60
Query: 43 -QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIA 100
+ V+FD Y IR +L ++L + +EGHADE G+ +IA
Sbjct: 61 QMQQLQQNNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADERGTPEYNIA 120
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
LG RRA AV Y +G+SA ++ + SYGKE P+V GHDE AY+KNRRA++
Sbjct: 121 LGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYSKNRRAVLV 172
>gi|188995861|ref|YP_001930113.1| immunoreactive 23 kDa antigen [Porphyromonas gingivalis ATCC 33277]
gi|188595541|dbj|BAG34516.1| immunoreactive 23 kDa antigen [Porphyromonas gingivalis ATCC 33277]
Length = 223
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG-SWLEKHD 80
+ + + PD + + E + + F T+S ++ P L+ + + D
Sbjct: 75 QKKELEAAVPDATIQTVNDGEAILVTFDSGILFATNSSTLSPNSRTALTKFAANMNKNPD 134
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
D I GH D GS + L RRA +V+++ ++G+S SRM G P
Sbjct: 135 TDIRIVGHTDNTGSDKINDPLSERRAASVYSFLNSQGVSMSRMAAEGRGSHEPVADNSTV 194
Query: 141 DAYAKNRRAIVFL 153
+ NRR V++
Sbjct: 195 AGRSANRRVEVYI 207
>gi|149919402|ref|ZP_01907883.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
gi|149819708|gb|EDM79133.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
Length = 182
Score = 77.5 bits (189), Expect = 5e-13, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 55/162 (33%), Gaps = 13/162 (8%)
Query: 5 TIFIILSAITMMSISG-----------IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVF 53
T+ + LS +++ G P+ + E + +
Sbjct: 10 TVGVALSLGMLLTACGPIAFNDSIRYASAPTAEPAPEPEPPQTGHAKLEGDHIIIDGKIH 69
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNSSIALGLRRAYAVFN 111
F S I ++L ++ + H I GH GS ++ L RA AV +
Sbjct: 70 FAHDSAEILEDSFEILDDVAEVMNAHPELPMLDIIGHTSTEGSDKHNMELSTARAKAVAD 129
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
Y G+ ASR+ G+ P E+ +NRR +
Sbjct: 130 YLAGHGVDASRVTSEGKGETEPIADESTEEGKRQNRRVEFKI 171
>gi|258404319|ref|YP_003197061.1| OmpA/MotB domain-containing protein [Desulfohalobium retbaense DSM
5692]
gi|257796546|gb|ACV67483.1| OmpA/MotB domain protein [Desulfohalobium retbaense DSM 5692]
Length = 428
Score = 77.5 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 52/135 (38%), Gaps = 3/135 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL-GSWLEKHD 80
D D +P V + V S+ FD +R L++ + +
Sbjct: 295 DAKDECPGTPQGVQVDEKGC-PVPMDVSISILFDIDKSVVRGDYHDELADATAMLNKNPE 353
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHD 139
+ +IEGH D S ++ L +RA +V +Y I R+ +YG+ P+
Sbjct: 354 ANAVIEGHTDSTASAAYNMELSKKRAQSVRDYLVDTFDIDPQRLSTKAYGESQPTATNTT 413
Query: 140 EDAYAKNRRAIVFLK 154
NRR ++ L+
Sbjct: 414 RFGRKLNRRVVITLQ 428
>gi|167572001|ref|ZP_02364875.1| hypothetical protein BoklC_19324 [Burkholderia oklahomensis C6786]
Length = 439
Score = 77.5 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 43/132 (32%), Gaps = 4/132 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ ++ ++ + F++ S S+ + VL + L K +
Sbjct: 293 EPEIAAGLVTVRDEADRSVIVLRGDGLFESGSTSVIDRYMPVLIRVADALNKVQGSVRVS 352
Query: 87 GHADELG----SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
G+ D+ S+ L RA AV AR R+ G P
Sbjct: 353 GYTDDAPVRTARFASNWDLSRERAEAVRGLIAARLDRPDRITAEGRGTLDPVAPNDSPAN 412
Query: 143 YAKNRRAIVFLK 154
A+NRR + L
Sbjct: 413 RARNRRVEITLM 424
>gi|152966787|ref|YP_001362571.1| OmpA/MotB domain protein [Kineococcus radiotolerans SRS30216]
gi|151361304|gb|ABS04307.1| OmpA/MotB domain protein [Kineococcus radiotolerans SRS30216]
Length = 471
Score = 77.5 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 55/140 (39%), Gaps = 1/140 (0%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
+ + + L+ + + ++ V F S + P VL +
Sbjct: 244 AATAAVRPLEVYAEDLQGTVRTETSDAGARVALAADVLFALDSAELSPEARAVLETAATD 303
Query: 76 L-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
+ + + GH D+ G+ + ++ L RRA AV + + ++V G+ P+
Sbjct: 304 VLTRRPGPVAVVGHTDDQGADDYNLDLSRRRAQAVADVLGPLLGADYPLQVDGRGEAEPA 363
Query: 135 VYGHDEDAYAKNRRAIVFLK 154
V G +A A+NRR + +
Sbjct: 364 VPGPSTEARARNRRVELVVS 383
>gi|319785152|ref|YP_004144628.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317171040|gb|ADV14578.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 335
Score = 77.5 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 59/148 (39%), Gaps = 5/148 (3%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
+ + ++ G+D ++P+ + + + Q + + FD + +++P
Sbjct: 191 AVVFVRVLEAKGMDPAKVATAAPEDLSDSLASQGSVNLY---GILFDYNQDAVKPESKPA 247
Query: 69 LSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVT 126
L + +K I GH D GS ++ L RRA V V GI +R+
Sbjct: 248 LDEIAKVLTDKPALRLKIIGHTDNAGSAAYNLDLSTRRAANVSAALVGGYGIDPARLSFE 307
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G P ++ AKNRR + ++
Sbjct: 308 GAGLSRPIESNDTDEGRAKNRRVELVVQ 335
>gi|288942612|ref|YP_003444852.1| OmpA/MotB domain-containing protein [Allochromatium vinosum DSM
180]
gi|288897984|gb|ADC63820.1| OmpA/MotB domain protein [Allochromatium vinosum DSM 180]
Length = 309
Score = 77.5 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 48/114 (42%), Gaps = 4/114 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE----LGSRNSSI 99
++ ++ F + S ++ PA VL+ + L + D +EGH D S+
Sbjct: 162 IEVAINSNLLFSSGSATLEPAARPVLARVARLLGRRDVRIHVEGHTDNLPINNTIYPSNW 221
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA V N F GI RM YG+ P+ E A+NRR V +
Sbjct: 222 ELSSGRAATVVNLFAQNGIDPERMVAIGYGQFQPTDSNATEAGRARNRRVAVIV 275
>gi|242279943|ref|YP_002992072.1| peptidoglycan-associated lipoprotein [Desulfovibrio salexigens DSM
2638]
gi|242122837|gb|ACS80533.1| peptidoglycan-associated lipoprotein [Desulfovibrio salexigens DSM
2638]
Length = 196
Score = 77.5 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 1/131 (0%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCD 82
+ + + +G+ V FD S+ I+ +L + +
Sbjct: 64 QEQALEEERQAAAAKKEFDNAVVELGNMVHFDFDSFEIKQEYRPLLQQKAEILKKYDNVT 123
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
+IEG+ D+ G+ ++ALG RRA A + + + G++ R+ + S+G+E P G +E A
Sbjct: 124 MVIEGYCDDRGTEEYNLALGERRARAAYEFLILLGVTPERLSIVSFGEEDPLDPGQNETA 183
Query: 143 YAKNRRAIVFL 153
+AKNRRA L
Sbjct: 184 WAKNRRAQFRL 194
>gi|288940691|ref|YP_003442931.1| peptidoglycan-associated lipoprotein [Allochromatium vinosum DSM
180]
gi|288896063|gb|ADC61899.1| peptidoglycan-associated lipoprotein [Allochromatium vinosum DSM
180]
Length = 177
Score = 77.5 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 16/162 (9%)
Query: 6 IFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG---------------D 50
+ ++L + + S P + + S+
Sbjct: 14 LTVMLGGTGLAGCASKPAPSDTASRPAPIQGRPATTAPMESTRPTYAGPWEDPSSPLYQR 73
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
+++FD + I+P + V+ + + +EGH DE G+R ++AL +RA +V
Sbjct: 74 TIYFDYDTAEIKPQYLDVIRTHARYLGSQPGTRVTLEGHTDERGTREYNLALSDQRADSV 133
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ +A G+ A++M + SYG+E P+ GH E ++ NRR I+
Sbjct: 134 RRFMLAEGVPANQMTILSYGEERPADPGHSEQSWRLNRRVII 175
>gi|78186499|ref|YP_374542.1| peptidoglycan-associated lipoprotein [Chlorobium luteolum DSM 273]
gi|78166401|gb|ABB23499.1| peptidoglycan-associated lipoprotein [Chlorobium luteolum DSM 273]
Length = 171
Score = 77.5 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 75/171 (43%), Gaps = 17/171 (9%)
Query: 1 MQYSTI-FIILSAITMMSISGIDNLDTKISSPDTVLNESSLQ---------------EQF 44
M+ S F+ L+ + S + + + + + +++
Sbjct: 1 MKKSVYGFLALALMFTAGCSSKNAVAPSGADEASAPAPAEASAPVSSVASGPSGYGFDEY 60
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGL 103
+ VF++ S + L SW+ + +IEGH DE G+ +IALG
Sbjct: 61 QTGPLGDVFYEFDSSELAADAQTQLQQNASWMNSNAAASTMIEGHCDERGTSEYNIALGE 120
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RRA Y V G+ +SR++ SYG+E P GHDE A++KNRRA LK
Sbjct: 121 RRASTAKEYIVRLGVPSSRIETVSYGEEKPFAAGHDEAAWSKNRRAHFILK 171
>gi|295095728|emb|CBK84818.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 568
Score = 77.5 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
Query: 53 FFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FDT ++++PA ++L N L K ++ GH D G S+ L L+RA +V +
Sbjct: 438 LFDTGKWALKPASTKLLVNSLVGIKAKPGWLIVVAGHTDSTGDDQSNQVLSLKRAESVRD 497
Query: 112 YFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ G V YG+ P + A NRR + L
Sbjct: 498 WMRDTGDVPESCFAVQGYGESRPVATNDTAEGRALNRRVEISL 540
>gi|193076988|gb|ABO11733.2| putative outer membrane lipoprotein [Acinetobacter baumannii ATCC
17978]
Length = 255
Score = 77.5 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 41/106 (38%), Gaps = 1/106 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
+ F++ S + A ++L + + I GH D G N ++ L RA
Sbjct: 149 NRIIEFESGSAVLTEAGQKILDEMAVALNKVGGKKVKIVGHTDSSGDANKNLKLSQDRAL 208
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV NY +++ I A + G P + KNRR +
Sbjct: 209 AVKNYLISKNIPADHLSTEGLGSSKPVADNTSAEGRKKNRRIEFTV 254
>gi|30314434|gb|AAP15426.1| outer membrane lipoprotein precursor [Burkholderia ambifaria]
Length = 149
Score = 77.5 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 43/136 (31%), Positives = 72/136 (52%), Gaps = 2/136 (1%)
Query: 19 SGIDNLDTKISSPDTV-LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
+ + T+ S+ + +N L + S S++FD SYS++ ++ +L+
Sbjct: 11 TNAGAVSTQPSADNVAQVNVDPLNDPNSPLAKRSIYFDFDSYSVKDEYQPLMQQHAQYLK 70
Query: 78 KHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
H LI+G+ DE G+ ++ALG +RA AV G++ S+M+ S GKE P
Sbjct: 71 SHPQRHVLIQGNTDERGTSEYNLALGQKRAEAVRRAMALLGVNDSQMEAVSLGKEKPQAS 130
Query: 137 GHDEDAYAKNRRAIVF 152
GHDE ++A+NRRA +
Sbjct: 131 GHDEASWAQNRRADLV 146
>gi|327396585|dbj|BAK14006.1| putative OmpA-family membrane protein [Pantoea ananatis AJ13355]
Length = 353
Score = 77.5 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 2/119 (1%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSR 95
+S+ + FD+ +++ ++L N L K ++ GH D G+
Sbjct: 207 STSIPVPTIVRLDSMSLFDSGKSALKDGSTKMLVNSLVGIKAKPGWLIIVSGHTDNTGNP 266
Query: 96 NSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ AL L+RA AV N+ G V YG+ P + A NRR + L
Sbjct: 267 QLNQALSLKRAEAVRNWMRDTGGVPESCFAVQGYGESRPVAANGTPEGRALNRRVEISL 325
>gi|261253628|ref|ZP_05946201.1| outer membrane protein A precursor [Vibrio orientalis CIP 102891]
gi|260937019|gb|EEX93008.1| outer membrane protein A precursor [Vibrio orientalis CIP 102891]
Length = 324
Score = 77.5 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 40/101 (39%), Gaps = 1/101 (0%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F +S + L L +L + + I G+ D G+ + + +RA +V
Sbjct: 215 FKLNSTELNQDSADQLDELVEFLNTYPQANVEIIGYTDTSGAAEYNQVVSEKRAESVATT 274
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+GI +SR+ G+ P + +NRR V +
Sbjct: 275 LEEKGIDSSRITARGEGENNPIASNETREGREQNRRVEVIV 315
>gi|88861313|ref|ZP_01135944.1| outer membrane protein [Pseudoalteromonas tunicata D2]
gi|88816692|gb|EAR26516.1| outer membrane protein [Pseudoalteromonas tunicata D2]
Length = 178
Score = 77.5 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 50/177 (28%), Positives = 80/177 (45%), Gaps = 25/177 (14%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSP--------------------DTVLN 36
MQ + I I + +T+ + S N+D S +
Sbjct: 1 MQLNKILKGLLIAVPVMTLAACSSSSNVDEGASQQNQTNQAQQTTDTVQVETIAREKTAE 60
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
E ++ + ++FD + + +L ++ + LIEGHADE G+
Sbjct: 61 EKLREKYEALRQEQVIYFDFDTAIVSSQYADLLQAHANFLVVNPSVKVLIEGHADERGTP 120
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+IALG RR AV Y + G+SAS++ V SYG+E P V +E+A+AKNRRA++
Sbjct: 121 EYNIALGERRGDAVVTYLQSLGVSASQLSVVSYGEEKPMVKSRNEEAFAKNRRAVLV 177
>gi|254502312|ref|ZP_05114463.1| OmpA family protein [Labrenzia alexandrii DFL-11]
gi|222438383|gb|EEE45062.1| OmpA family protein [Labrenzia alexandrii DFL-11]
Length = 190
Score = 77.5 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 5/153 (3%)
Query: 7 FIILSAITMMSISGIDN--LDTKISSPDTVLNE--SSLQEQFSSSVGDSVFFDTSSYSIR 62
++ + + S + N ++P E +E+F +VG ++FD S ++
Sbjct: 27 LAVVFGLGLASCNTASNLASPNVTNAPAAGFAEIRPGSEEEFIINVGRRIYFDRGSATVS 86
Query: 63 PADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS 121
L N W + ++GHAD+ GS + L +RA AV+N + RG++A
Sbjct: 87 DEAKMTLDNQAKWLKQNKSWLVKVQGHADDPGSEAAQKTLSTQRATAVYNALIERGVNAK 146
Query: 122 RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RM V YG E P ++NRR +V L+
Sbjct: 147 RMWVKGYGVERPVTDCDAVTCQSQNRRVVVNLR 179
>gi|33863187|ref|NP_894747.1| outer membrane protein [Prochlorococcus marinus str. MIT 9313]
gi|33635104|emb|CAE21090.1| Bacterial outer membrane protein [Prochlorococcus marinus str. MIT
9313]
Length = 214
Score = 77.5 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 57/131 (43%), Gaps = 8/131 (6%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHAD 90
D + +++ + V FD +++P+ I+ L + + + D IEGH D
Sbjct: 81 DDLNIVVEKEKEILIELAADVLFDFDKANLKPSAIKSLQGVAKRIRESSRGDVRIEGHTD 140
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDA------Y 143
GS + L +RA +V ++FV+ G ++ + G+ P V E+
Sbjct: 141 SKGSNEYNQTLSEKRAISVRDWFVSEGGLSNVQFATKGLGELKPVVSNTTEEGADDPIGR 200
Query: 144 AKNRRAIVFLK 154
+NRR + +K
Sbjct: 201 QRNRRVEIIIK 211
>gi|332664439|ref|YP_004447227.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332333253|gb|AEE50354.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 228
Score = 77.5 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 53/128 (41%), Gaps = 1/128 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
+ E + + FD SY+++ A L ++++D ++ GH D
Sbjct: 91 GKSAEVERVGESILVTFDSGIMFDVDSYALKAATRANLDKAAETMKEYDKTEIIVMGHTD 150
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + L RA AV ++ G++ASR+ +G++ P +NRR
Sbjct: 151 ATGSDEYNQKLSENRAAAVSSFLQQNGVTASRLTKKGFGEQKPVASNTSVSGREQNRRVE 210
Query: 151 VFLKGCRA 158
+ + +A
Sbjct: 211 IAIVASKA 218
>gi|315605260|ref|ZP_07880306.1| photosystem I P700 chlorophyll a apoprotein A2 [Actinomyces sp.
oral taxon 180 str. F0310]
gi|315313077|gb|EFU61148.1| photosystem I P700 chlorophyll a apoprotein A2 [Actinomyces sp.
oral taxon 180 str. F0310]
Length = 401
Score = 77.5 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 47/118 (39%), Gaps = 8/118 (6%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIAL 101
++ DS+ FD IRP Q LS L + L I GH D + + L
Sbjct: 282 GTVITLEDSILFDFGKSDIRPDAAQTLSTLATVLNNAKVPAAHIYGHTDSVSDEAFNQKL 341
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG------HDEDAYAKNRRAIVFL 153
RA AV N G++A+ + T YG+ P + A NRR +++
Sbjct: 342 SEDRANAVMNDLSKNGVTAT-LDATGYGETKPVAPNENPDGSDNPAGRALNRRVEIYI 398
>gi|255263704|ref|ZP_05343046.1| OmpA domain protein [Thalassiobium sp. R2A62]
gi|255106039|gb|EET48713.1| OmpA domain protein [Thalassiobium sp. R2A62]
Length = 632
Score = 77.5 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 45/124 (36%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHA 89
E +++ +++ + F+ S +I + + L++ I G+
Sbjct: 476 AALPSPEECIEQIQAATSNAKITFEPGSANIDAGARSTVDQIAEILQRCTSTKIEIAGYT 535
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G + L +RA AV AR + S YG+E P ED NRR
Sbjct: 536 DSQGREVMNQQLSQQRAEAVLTALRARRVPTSAFTAIGYGEESPIADNETEDGREANRRI 595
Query: 150 IVFL 153
L
Sbjct: 596 EFKL 599
>gi|169633791|ref|YP_001707527.1| putative outer membrane lipoprotein [Acinetobacter baumannii SDF]
gi|169796445|ref|YP_001714238.1| putative outer membrane lipoprotein [Acinetobacter baumannii AYE]
gi|184157625|ref|YP_001845964.1| outer membrane protein [Acinetobacter baumannii ACICU]
gi|215483907|ref|YP_002326132.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter baumannii
AB307-0294]
gi|301345916|ref|ZP_07226657.1| OmpA/MotB domain protein [Acinetobacter baumannii AB056]
gi|301512888|ref|ZP_07238125.1| OmpA/MotB domain protein [Acinetobacter baumannii AB058]
gi|332854748|ref|ZP_08435526.1| OmpA family protein [Acinetobacter baumannii 6013150]
gi|332865708|ref|ZP_08436518.1| OmpA family protein [Acinetobacter baumannii 6013113]
gi|332874587|ref|ZP_08442488.1| OmpA family protein [Acinetobacter baumannii 6014059]
gi|169149372|emb|CAM87256.1| putative outer membrane lipoprotein [Acinetobacter baumannii AYE]
gi|169152583|emb|CAP01565.1| putative outer membrane lipoprotein [Acinetobacter baumannii]
gi|183209219|gb|ACC56617.1| Outer membrane protein [Acinetobacter baumannii ACICU]
gi|213986628|gb|ACJ56927.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter baumannii
AB307-0294]
gi|322507933|gb|ADX03387.1| Putative outer membrane lipoprotein [Acinetobacter baumannii
1656-2]
gi|323517525|gb|ADX91906.1| Outer membrane protein [Acinetobacter baumannii TCDC-AB0715]
gi|332727834|gb|EGJ59237.1| OmpA family protein [Acinetobacter baumannii 6013150]
gi|332735135|gb|EGJ66217.1| OmpA family protein [Acinetobacter baumannii 6013113]
gi|332737225|gb|EGJ68151.1| OmpA family protein [Acinetobacter baumannii 6014059]
Length = 255
Score = 77.5 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 1/106 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
+ F++ S + A ++L + + I GH D G ++ L RA
Sbjct: 149 NRIIEFESGSAVLTEAGQKILDEMAVALNKVGGKKVKIVGHTDSSGDATKNLKLSQDRAL 208
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV NY +++ I A + G P + KNRR +
Sbjct: 209 AVKNYLISKNIPADHLSTEGLGSSKPVADNTSAEGRKKNRRIEFTV 254
>gi|190572988|ref|YP_001970833.1| putative outer membrane protein [Stenotrophomonas maltophilia
K279a]
gi|190010910|emb|CAQ44519.1| putative outer membrane protein [Stenotrophomonas maltophilia
K279a]
Length = 366
Score = 77.5 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 54/139 (38%), Gaps = 8/139 (5%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDF 83
D +S S V FD ++RP + +LS L+++
Sbjct: 228 DKCPNSQPGQTIGPDGCPVPVSIDLKGVNFDFDKSNLRPDAVAILSEATEILKRYPDLRV 287
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYG----- 137
+ GH D G+ + L RRA AV+NY G+ A R+ YG+ P
Sbjct: 288 EVAGHTDSKGTDAYNQKLSERRATAVYNYLTKNGVDAGRLVGPIGYGESRPIAPNTNPDG 347
Query: 138 -HDEDAYAKNRRAIVFLKG 155
+ + AKNRR + ++
Sbjct: 348 SDNPEGRAKNRRTELNVQN 366
>gi|222054510|ref|YP_002536872.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
gi|221563799|gb|ACM19771.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
Length = 287
Score = 77.5 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 52/130 (40%), Gaps = 8/130 (6%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
+ S L+ + + ++ D+V FD+ I+P + VL + L+ IEGH D
Sbjct: 154 QGQVTISELKGKLTVNMVDAVLFDSGKAEIKPEGLIVLQKVIDILKNIKDKSIRIEGHTD 213
Query: 91 ELGS-------RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
++ L RA V Y +GI + +YG+ P +
Sbjct: 214 NDQIGGALAKKYQTNWELSAARAINVTRYLQQQGIDPLNLSAIAYGEFKPVAANDSREGK 273
Query: 144 AKNRRAIVFL 153
AKNRR + L
Sbjct: 274 AKNRRIEIIL 283
>gi|153875874|ref|ZP_02003478.1| OmpA/MotB [Beggiatoa sp. PS]
gi|152067662|gb|EDN66522.1| OmpA/MotB [Beggiatoa sp. PS]
Length = 263
Score = 77.5 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 41/101 (40%), Gaps = 1/101 (0%)
Query: 54 FDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F+ + + L ++ + IEGH D G ++ L RRA +V
Sbjct: 158 FENDRTDLSQTAQSDIKTLAAFLKQHPYFRISIEGHTDNAGIHTHNLGLSERRATSVKFA 217
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ GI++ R+ V +G+ P + KNRR + +
Sbjct: 218 LMNDGITSKRITVKGFGETRPIGSNRTQQGRQKNRRVEIII 258
>gi|126641351|ref|YP_001084335.1| putative outer membrane lipoprotein [Acinetobacter baumannii ATCC
17978]
Length = 209
Score = 77.5 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 41/106 (38%), Gaps = 1/106 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
+ F++ S + A ++L + + I GH D G N ++ L RA
Sbjct: 103 NRIIEFESGSAVLTEAGQKILDEMAVALNKVGGKKVKIVGHTDSSGDANKNLKLSQDRAL 162
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV NY +++ I A + G P + KNRR +
Sbjct: 163 AVKNYLISKNIPADHLSTEGLGSSKPVADNTSAEGRKKNRRIEFTV 208
>gi|148555047|ref|YP_001262629.1| peptidoglycan-associated lipoprotein [Sphingomonas wittichii RW1]
gi|148500237|gb|ABQ68491.1| Peptidoglycan-associated lipoprotein [Sphingomonas wittichii RW1]
Length = 175
Score = 77.5 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 19/172 (11%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSL------------------QE 42
M +T+ I+L + +SIS + P + +
Sbjct: 2 MARTTMKIVLVSALALSISACAKKKPEELPPPPATTAPAPAPEAPLPPPSTGPVPGSRAD 61
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIAL 101
S + D++ F T +Y + D +L+ SW + + +EGH DE G+R ++AL
Sbjct: 62 FLSQAGTDTIHFATDAYDVDAEDQAILTRQASWLAKYPNVSVTLEGHCDERGTREYNLAL 121
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G RRA A N+ V+ G+SASR+ V SYGKE P G DE A+A+NRRA+ +
Sbjct: 122 GERRANAAKNFLVSAGVSASRISVISYGKERPVATGSDEAAWAQNRRAVTIV 173
>gi|326800681|ref|YP_004318500.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
gi|326551445|gb|ADZ79830.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
Length = 650
Score = 77.5 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLR 104
S++ +++FF T+ Y + P L L L+ + I GH D GS ++ L +
Sbjct: 535 SAILNNIFFPTNGYELLPTSESDLMELFQLLQHNKHIRIEITGHTDNTGSAQANQVLSEK 594
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA AV+ Y +++GI +R+ YG+ P E +NRR +
Sbjct: 595 RALAVYAYLLSKGIDKTRLAYKGYGQNNPIADNTTEKGKQQNRRTEFKI 643
>gi|187933571|ref|YP_001885053.1| chemotaxis protein MotB [Clostridium botulinum B str. Eklund 17B]
gi|187721724|gb|ACD22945.1| chemotaxis protein MotB [Clostridium botulinum B str. Eklund 17B]
Length = 247
Score = 77.2 bits (188), Expect = 6e-13, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 48/126 (38%), Gaps = 5/126 (3%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSS 98
+ + DSV F++ + P +VL + + + ++EGH D + N
Sbjct: 120 QDERGVILELKDSVLFESGQADLIPGSKEVLDKVDTLISALPNSVIVEGHTDNVPISNYK 179
Query: 99 IALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
A R V + + + YG+ P VY + E+ AKNRR + +
Sbjct: 180 YASNWELSTQRAVNVVKYFVETKSNDPMKFSAAGYGEYRPIVYNNSEENKAKNRRVNILI 239
Query: 154 KGCRAN 159
+ N
Sbjct: 240 INEKDN 245
>gi|167035288|ref|YP_001670519.1| OmpA/MotB domain-containing protein [Pseudomonas putida GB-1]
gi|166861776|gb|ABZ00184.1| OmpA/MotB domain protein [Pseudomonas putida GB-1]
Length = 230
Score = 77.2 bits (188), Expect = 6e-13, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 4/134 (2%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK--HDC 81
+ P V+ E +Q++ + D V F+ S + +D + L+ + + L++
Sbjct: 97 ANGCPPEPAAVVEEVVVQKEEVIVIRD-VHFEFDSARLTSSDKERLNTIATRLKQEAPSA 155
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDE 140
+ GH D +GS + + L RRA++V +Y V G+ V G+ P
Sbjct: 156 RLSVSGHTDSVGSDSYNQKLSERRAHSVTDYLVESGVPRRSFVSVVGAGETQPVADNATA 215
Query: 141 DAYAKNRRAIVFLK 154
+ A NRR + ++
Sbjct: 216 EGRAMNRRTEIKIQ 229
>gi|213054486|gb|ACJ39422.1| PomB2 [Aeromonas hydrophila]
Length = 297
Score = 77.2 bits (188), Expect = 6e-13, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 49/133 (36%), Gaps = 5/133 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
K D + +L +Q + + F S ++P V+ + + L+ + I
Sbjct: 149 KAQIQDGAIEVEALGQQIIIRIREKAAFPAGSAFLQPQFWPVVRKVATLLKDVPGEITIS 208
Query: 87 GHADELGS----RNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDED 141
GH D++ + S+ L +RA AV + + R+ V P V +
Sbjct: 209 GHTDDVATEDELFQSNWELSSQRAVAVAHQMIKVPGFDGGRLVVQGMADSQPLVPNTTPE 268
Query: 142 AYAKNRRAIVFLK 154
NRR + +
Sbjct: 269 NRRMNRRVEISIM 281
>gi|154685777|ref|YP_001420938.1| flagellar motor protein MotB [Bacillus amyloliquefaciens FZB42]
gi|154351628|gb|ABS73707.1| MotB [Bacillus amyloliquefaciens FZB42]
Length = 261
Score = 77.2 bits (188), Expect = 6e-13, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 53/135 (39%), Gaps = 6/135 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+T L +E ++ DS+FFD+ IR DI + + + + + +I GH D
Sbjct: 123 ETQLETKLTKEGLLITIKDSIFFDSGRADIRQEDIPLAKEISNLLVLNPPRNIIISGHTD 182
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ S+ L + RA A +G+ P+V + +K
Sbjct: 183 NVPIKNSQYQSNWHLSVMRAVNFMAILTENPKLDAKVFSAKGFGEYKPAVSNKTAEGRSK 242
Query: 146 NRRAIVFLKGCRANT 160
NRR V ++ A T
Sbjct: 243 NRRVEVLIQPRNAAT 257
>gi|4098205|gb|AAD09577.1| Omp22 [Helicobacter pylori]
Length = 179
Score = 77.2 bits (188), Expect = 6e-13, Method: Composition-based stats.
Identities = 38/177 (21%), Positives = 74/177 (41%), Gaps = 24/177 (13%)
Query: 1 MQYSTIFIILSAITMMSIS-------------GIDNLDTKISSPDTVLNESSLQEQFSSS 47
M+ S++F L A ++ + + S + + +++ +
Sbjct: 1 MKRSSVFGFLVAFLFIAGCKHNMDKETVAGDVSAKAVQSAPVSTEIAQEKQEPKQEPAPV 60
Query: 48 VGDS-----------VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRN 96
V + ++FD Y I+ +D + L + +++ L+EG+ DE GS
Sbjct: 61 VEEKPAVESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEFGSSE 120
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ ALG++R +V N V +G+ +K S+G+ P + Y +NRR V L
Sbjct: 121 YNQALGVKRTLSVKNALVIKGVEKDMIKTISFGETKPKCTQKTRECYKENRRVDVKL 177
>gi|91976354|ref|YP_569013.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
gi|91682810|gb|ABE39112.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
Length = 434
Score = 77.2 bits (188), Expect = 6e-13, Method: Composition-based stats.
Identities = 31/121 (25%), Positives = 50/121 (41%), Gaps = 1/121 (0%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELG 93
E+ + + + F+ S I A + VL L + + + GH D G
Sbjct: 314 SVEACQSKLSTLVAAQKINFERGSAEIEQASLPVLKQLAAVIAHCPAAQIEVAGHTDANG 373
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ ++ AL RRA AV + GI ++++ YG P +A AKNRR +
Sbjct: 374 KKAANEALSKRRAEAVADSLTKAGIGSAKLIAVGYGSAKPLGPNDTAEARAKNRRIEFAV 433
Query: 154 K 154
K
Sbjct: 434 K 434
>gi|302381967|ref|YP_003817790.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
gi|302192595|gb|ADL00167.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
Length = 200
Score = 77.2 bits (188), Expect = 6e-13, Method: Composition-based stats.
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 3/141 (2%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
+ + G + ++ VL E DSV F + ++ P Q L+ L
Sbjct: 59 VAQVEGTAGQALERANAAQVLAEGKFM-YEVVLSDDSVKFPSDRDALSPEAEQRLAELAQ 117
Query: 75 WLEKHDCDF--LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
L+ + + I+GH D G + + ALG RA AV +GI+ +RM SYG+E
Sbjct: 118 RLKAENKNVYLEIQGHTDAAGPESYNDALGEARAEAVRRSLSRQGIALNRMATISYGEEA 177
Query: 133 PSVYGHDEDAYAKNRRAIVFL 153
P + A+NRR + +
Sbjct: 178 PVADNATPEGRAQNRRVAIVV 198
>gi|305666954|ref|YP_003863241.1| OmpA family protein [Maribacter sp. HTCC2170]
gi|88709183|gb|EAR01417.1| OmpA family protein [Maribacter sp. HTCC2170]
Length = 217
Score = 77.2 bits (188), Expect = 6e-13, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 3/139 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDS--VFFDTSSYSIRPADIQVLSNLGSWLEKH 79
D +I + + E + + + V+FDTS +++ L L +++
Sbjct: 67 DRQAERIEEEIPGAEVTRVGEGINVTFNEEAGVYFDTSKSNVKGTSATTLDKLAGIFKEY 126
Query: 80 DCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
LIEGH D G + ++ L +RA +V NY +++GI A+R YG+ P
Sbjct: 127 PNSDVLIEGHTDSAGPDDYNMKLSQQRAESVTNYLISKGIEANRFSTKWYGENQPKADNE 186
Query: 139 DEDAYAKNRRAIVFLKGCR 157
+ AKNRR + + +
Sbjct: 187 TTEGKAKNRRVELAIIASK 205
>gi|120600257|ref|YP_964831.1| OmpA/MotB domain-containing protein [Shewanella sp. W3-18-1]
gi|146291813|ref|YP_001182237.1| OmpA/MotB domain-containing protein [Shewanella putrefaciens CN-32]
gi|120560350|gb|ABM26277.1| OmpA/MotB domain protein [Shewanella sp. W3-18-1]
gi|145563503|gb|ABP74438.1| OmpA/MotB domain protein [Shewanella putrefaciens CN-32]
gi|319425048|gb|ADV53122.1| OmpA/MotB domain protein [Shewanella putrefaciens 200]
Length = 228
Score = 77.2 bits (188), Expect = 6e-13, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 58/134 (43%), Gaps = 1/134 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH- 79
+ + T ++ + + ++ + V F + +VL+++ +++
Sbjct: 91 VQETKLRQQLASTGVSVTRNGDNIILNMPNEVTFGVDQTELSDGASRVLNSVALVAKEYS 150
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ G+ D GS ++ L RA V NY +++GI+ASR+K GK P
Sbjct: 151 KTQLNVLGYTDSSGSDAYNLRLSQVRASEVANYLMSKGIAASRVKSKGMGKASPIASNAS 210
Query: 140 EDAYAKNRRAIVFL 153
+ A+NRR + L
Sbjct: 211 AEGRAQNRRVEIVL 224
>gi|254489078|ref|ZP_05102282.1| OmpA/MotB domain protein [Roseobacter sp. GAI101]
gi|214042086|gb|EEB82725.1| OmpA/MotB domain protein [Roseobacter sp. GAI101]
Length = 416
Score = 77.2 bits (188), Expect = 6e-13, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 56/133 (42%), Gaps = 6/133 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
D ++ Q+ + + S F + S ++PA + L + L++ + ++ GH+D
Sbjct: 285 DGIVEVFQDQQTITVRLAGSNMFGSGSDRLQPAFEEPLRKVAQALDETEGPVIVVGHSDN 344
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+ S+ L L RA AV + + R++ ++ P + AKNR
Sbjct: 345 IPIKSSRFPSNERLSLARAEAVMRTLEGKLAKSDRLEAEGRAEKQPIADNSTREGRAKNR 404
Query: 148 RAIVFLKGCRANT 160
R + L R +T
Sbjct: 405 RIEIVL--VRKDT 415
>gi|160899279|ref|YP_001564861.1| hypothetical protein Daci_3845 [Delftia acidovorans SPH-1]
gi|160364863|gb|ABX36476.1| type IV / VI secretion system protein, DotU family [Delftia
acidovorans SPH-1]
Length = 443
Score = 77.2 bits (188), Expect = 6e-13, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 48/126 (38%), Gaps = 4/126 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ +++ ++ + + FD ++ ++P +QV+ + + L++ ++ G+ D
Sbjct: 296 EGLVSVRDEADRSTVILRGDGLFDPAATVVKPRYVQVIHRVAAALDEVPGKVVVNGYTDN 355
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
L S+ L RA AV R+ P + + A NR
Sbjct: 356 LPIRTARFPSNWNLSQERAQAVSQMLGGSLRDRQRLHAEGRADSDPVAPNNTAEGRALNR 415
Query: 148 RAIVFL 153
R + L
Sbjct: 416 RVEIVL 421
>gi|95928801|ref|ZP_01311547.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684]
gi|95135146|gb|EAT16799.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684]
Length = 415
Score = 77.2 bits (188), Expect = 6e-13, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 2/104 (1%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVF 110
+ FDT+ IRP IQ ++N +++ K+ LI GH D GS + L RRA AV
Sbjct: 309 IEFDTNKADIRPQHIQDMTNAAAFINKYPGEKILISGHTDSDGSEAYNQQLSQRRADAVK 368
Query: 111 NYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
Y I + + +G+ P KNRR + L
Sbjct: 369 AYLIQNYAIDGTNLTAKGFGESQPIADNTTAAGKQKNRRVELSL 412
>gi|327397929|gb|AEA73286.1| MopB [Stenotrophomonas maltophilia]
Length = 363
Score = 77.2 bits (188), Expect = 6e-13, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 54/139 (38%), Gaps = 8/139 (5%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDF 83
D +S S V FD ++RP + +LS L+++
Sbjct: 225 DKCPNSQPGQTIGPDGCPVPVSIDLKGVNFDFDKSNLRPDAVAILSEATEILKRYPDLRV 284
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYG----- 137
+ GH D G+ + L RRA AV+NY G+ A R+ YG+ P
Sbjct: 285 EVAGHTDSKGTDAYNQKLSERRATAVYNYLTKNGVDAGRLVGPIGYGESRPIAPNTNPDG 344
Query: 138 -HDEDAYAKNRRAIVFLKG 155
+ + AKNRR + ++
Sbjct: 345 SDNPEGRAKNRRTELNVQN 363
>gi|317048731|ref|YP_004116379.1| DotU family type IV / VI secretion system protein [Pantoea sp.
At-9b]
gi|316950348|gb|ADU69823.1| type IV / VI secretion system protein, DotU family [Pantoea sp.
At-9b]
Length = 412
Score = 77.2 bits (188), Expect = 6e-13, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 50/131 (38%), Gaps = 4/131 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
K ++ +Q ++ F + + ++R V+ + + + L+
Sbjct: 264 KPEIDAGLVAVRDEADQSVVTLKGDGLFTSGATTVRGRYEAVIQRIAAAMNNVSGKILVV 323
Query: 87 GHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
G++D + S+ L L RA +V + +R+K G+ P V +
Sbjct: 324 GYSDNVPIRSARFASNYELSLARAQSVQTLLQQQLTQPARVKAEGRGESNPLVPNTSAEN 383
Query: 143 YAKNRRAIVFL 153
A+NRR + L
Sbjct: 384 RARNRRVEITL 394
>gi|256785509|ref|ZP_05523940.1| secreted protein [Streptomyces lividans TK24]
Length = 206
Score = 77.2 bits (188), Expect = 6e-13, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 48/140 (34%), Gaps = 2/140 (1%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
++ + + ++ + + + ++ V F S + + +
Sbjct: 60 ATLAQAKVLDIKSVVEEQSGDERREDTNTSVTLALQAEVLFGKDSSKLGAEAKSRIRGIA 119
Query: 74 SWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKE 131
+ + + G D+LGS L RRA AV + + + +V YG++
Sbjct: 120 DEIRAQNATRVRVFGFTDDLGSSAHGDVLSKRRANAVHDVLSQSLNDAGITYEVRGYGEQ 179
Query: 132 MPSVYGHDEDAYAKNRRAIV 151
P E KNRR V
Sbjct: 180 YPIADNSTEAGRKKNRRVEV 199
>gi|126175870|ref|YP_001052019.1| OmpA/MotB domain-containing protein [Shewanella baltica OS155]
gi|152999218|ref|YP_001364899.1| OmpA/MotB domain-containing protein [Shewanella baltica OS185]
gi|160873831|ref|YP_001553147.1| OmpA/MotB domain-containing protein [Shewanella baltica OS195]
gi|217971891|ref|YP_002356642.1| OmpA/MotB domain-containing protein [Shewanella baltica OS223]
gi|304411219|ref|ZP_07392834.1| OmpA/MotB domain protein [Shewanella baltica OS183]
gi|307306514|ref|ZP_07586257.1| OmpA/MotB domain protein [Shewanella baltica BA175]
gi|125999075|gb|ABN63150.1| OmpA/MotB domain protein [Shewanella baltica OS155]
gi|151363836|gb|ABS06836.1| OmpA/MotB domain protein [Shewanella baltica OS185]
gi|160859353|gb|ABX47887.1| OmpA/MotB domain protein [Shewanella baltica OS195]
gi|217497026|gb|ACK45219.1| OmpA/MotB domain protein [Shewanella baltica OS223]
gi|304350412|gb|EFM14815.1| OmpA/MotB domain protein [Shewanella baltica OS183]
gi|306910805|gb|EFN41233.1| OmpA/MotB domain protein [Shewanella baltica BA175]
gi|315266058|gb|ADT92911.1| OmpA/MotB domain protein [Shewanella baltica OS678]
Length = 230
Score = 77.2 bits (188), Expect = 6e-13, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH- 79
+ + T ++ + + ++ + V F + +VL+++ +++
Sbjct: 92 VQETKLRQQLASTGVSVTRSGDNIILNMPNEVTFGVDQTELSDGAKRVLNSVAVVAKEYS 151
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ G+ D GS + ++ L RA V NY +++G++++R+K G+ P +
Sbjct: 152 KTQLNVLGYTDSSGSDSYNLRLSQVRAGEVGNYLMSKGVASARVKSKGMGEASPIASNAN 211
Query: 140 EDAYAKNRRAIVFL 153
+ A+NRR + L
Sbjct: 212 ANGRAQNRRVEIVL 225
>gi|78060486|ref|YP_367061.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383]
gi|77965036|gb|ABB06417.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
Length = 220
Score = 77.2 bits (188), Expect = 6e-13, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 1/110 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLR 104
S+ +F T S + A L L + +KH ++G+ D GS + L R
Sbjct: 110 VSLTGDAYFATDSAVLTSAATAALDTLLNQQGDKHFSRVEVDGYTDATGSDAHNQVLSKR 169
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RA AV Y G+ A T +G+ P+ + A+NRR + L+
Sbjct: 170 RADAVAGYLREHGLKAESFAATGHGETNPAASNETAEGRARNRRVEISLQ 219
>gi|163751256|ref|ZP_02158484.1| peptidoglycan-associated lipoprotein [Shewanella benthica KT99]
gi|161328970|gb|EDQ00044.1| peptidoglycan-associated lipoprotein [Shewanella benthica KT99]
Length = 178
Score = 77.2 bits (188), Expect = 6e-13, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 73/171 (42%), Gaps = 21/171 (12%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKI--------------------SSPDTVLNESSLQE 42
+ + ++L + + + S +T +P E +
Sbjct: 7 FKAMLVVLPIMALSACSSTSESETDATSSTSGSGSELATGGVETGGVAPILTPEEQQRLK 66
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIAL 101
++FD + +VL G++ +E + +IEGHADE G+ +IAL
Sbjct: 67 YQELRKEHIIYFDFDRSLVSAQFAEVLQAHGNYLVEHPNVRLMIEGHADERGTPEYNIAL 126
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
G RRA AV Y G+ S+M + SYG+E P +D++A NRRA++
Sbjct: 127 GERRAKAVAKYLQGMGVLPSQMSIVSYGEEKPLDMSRTDDSFAINRRAVLV 177
>gi|83647833|ref|YP_436268.1| flagellar motor protein MotD [Hahella chejuensis KCTC 2396]
gi|83635876|gb|ABC31843.1| Flagellar motor protein [Hahella chejuensis KCTC 2396]
Length = 260
Score = 77.2 bits (188), Expect = 6e-13, Method: Composition-based stats.
Identities = 21/127 (16%), Positives = 49/127 (38%), Gaps = 4/127 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
+++ + S+ +++ F++ A ++ + L+ + L+EG D
Sbjct: 122 GQGMVSINENDNWIELSLRNNLLFNSGDAVPVDAAFNLIDGIAGILKDYPNAILVEGFTD 181
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ S+ L R+ AV + G+ R+ YG+ P + +N
Sbjct: 182 NVPIRSSAYPSNWELSSARSAAVARLLIIGGVDPRRLAAVGYGEYQPVARNDTSEGRQRN 241
Query: 147 RRAIVFL 153
RR ++ +
Sbjct: 242 RRVVLLV 248
>gi|323137848|ref|ZP_08072923.1| OmpA/MotB domain protein [Methylocystis sp. ATCC 49242]
gi|322396851|gb|EFX99377.1| OmpA/MotB domain protein [Methylocystis sp. ATCC 49242]
Length = 477
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 48/128 (37%), Gaps = 1/128 (0%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIE 86
+ + L+ ++ + + + F+T ++ ++ L + L +
Sbjct: 350 ARAAGSPLDAAACRTALTDLARTPIIFETDDSAVAADSAPLVDALTATVLRCRAATIEVA 409
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
H D G + + RRA + + + G SR+ YG E P ++ A+N
Sbjct: 410 AHTDNFGIEEINRSRTKRRAQVLVDRLIKAGADPSRVSAAGYGSERPVAPNDSDENRARN 469
Query: 147 RRAIVFLK 154
RR ++
Sbjct: 470 RRVEFVVR 477
>gi|254497489|ref|ZP_05110282.1| flagellar motor protein MotD [Legionella drancourtii LLAP12]
gi|254353304|gb|EET12046.1| flagellar motor protein MotD [Legionella drancourtii LLAP12]
Length = 255
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 58/143 (40%), Gaps = 5/143 (3%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQF-SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
G+D+++ +S + + + Q+ + + F + ++ + L + L+K
Sbjct: 88 GLDDINQSLSELEDQNYKINRQKGWIELDIKSGALFGSGDADLKAEALVKLMQIAGKLKK 147
Query: 79 HDCDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
IEG+ D + S+ L RA +V A GI + R+ VT YG + P
Sbjct: 148 SHAIVSIEGYTDNVPIETPQYPSNWELSATRAASVGRVLNAYGIDSHRIMVTGYGDQYPI 207
Query: 135 VYGHDEDAYAKNRRAIVFLKGCR 157
+ A NRR + + R
Sbjct: 208 ADNVTDVGRALNRRVSIIIAVNR 230
>gi|92113628|ref|YP_573556.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043]
gi|91796718|gb|ABE58857.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043]
Length = 283
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 50/139 (35%), Gaps = 4/139 (2%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+G+ L + + + + + + + + F +S + VL L L
Sbjct: 136 AGVRRLPNTLKPFIDGVVVTQSAQGLNFRIENHLLFSSSQADLTDEGRAVLRQLLDSLRA 195
Query: 79 HDCDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
D + IEGH D S+ L RA AV + V G+ + ++ Y P
Sbjct: 196 FDGEITIEGHTDSRPIATDRFPSNWELSTARATAVLRFLVGEGLDSEALRAVGYADTRPL 255
Query: 135 VYGHDEDAYAKNRRAIVFL 153
+ A NRR + L
Sbjct: 256 QSNDSAEGRAANRRVELVL 274
>gi|294783612|ref|ZP_06748936.1| outer membrane protein [Fusobacterium sp. 1_1_41FAA]
gi|294480490|gb|EFG28267.1| outer membrane protein [Fusobacterium sp. 1_1_41FAA]
Length = 141
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 1/122 (0%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ N + +E ++ FD ++P ++L+NL ++E+++ + IEGH D +
Sbjct: 17 DITNIEAPKEMTIVLDERALNFDFDKSVVKPQYFEMLNNLKDFIEQNNYELTIEGHTDSV 76
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIV 151
GS +I L RRA AV + G+ R+ + + G+E P + +NRR
Sbjct: 77 GSNQYNIGLSRRRAEAVKAKLIEFGLPEDRIVGIEAKGEEYPVATNETPEGRLQNRRVEF 136
Query: 152 FL 153
L
Sbjct: 137 RL 138
>gi|260555512|ref|ZP_05827733.1| outer membrane protein [Acinetobacter baumannii ATCC 19606]
gi|260412054|gb|EEX05351.1| outer membrane protein [Acinetobacter baumannii ATCC 19606]
Length = 255
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 1/106 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
+ F++ S + A ++L + + I GH D G ++ L RA
Sbjct: 149 NRIIEFESGSAVLTEAGQKILDEMAVALNKVGGKKVKIVGHTDSSGDATKNLKLSQDRAL 208
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV NY +++ I A + G P + KNRR +
Sbjct: 209 AVKNYLISKNIPADHLSTEGLGSSKPVADNTSAEGRKKNRRIEFTV 254
>gi|113866689|ref|YP_725178.1| outer membrane protein [Ralstonia eutropha H16]
gi|113525465|emb|CAJ91810.1| outer membrane protein [Ralstonia eutropha H16]
Length = 425
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 46/125 (36%), Gaps = 4/125 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
V++ + + + F + + +L + + K + GH+D +
Sbjct: 299 GVISVQEDATRSAVTFRGDDMFGGGRAEVSDKVLPLLDKVAGEINKVSGKVTVVGHSDNV 358
Query: 93 GSRNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
+ + L RA V Y ++G++ +R++ G P A A+NRR
Sbjct: 359 PIKTAKYPSNQVLSEERAATVTEYLASKGVAKNRLEAIGKGDSEPLTDNKTPAARARNRR 418
Query: 149 AIVFL 153
+ +
Sbjct: 419 VEIVV 423
>gi|255318660|ref|ZP_05359891.1| outer membrane protein [Acinetobacter radioresistens SK82]
gi|262379115|ref|ZP_06072271.1| outer membrane protein [Acinetobacter radioresistens SH164]
gi|17978530|gb|AAK57731.1| OmpA-like protein precursor [Acinetobacter radioresistens]
gi|255304342|gb|EET83528.1| outer membrane protein [Acinetobacter radioresistens SK82]
gi|262298572|gb|EEY86485.1| outer membrane protein [Acinetobacter radioresistens SH164]
Length = 348
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 2/109 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
VFFDT+ +I+ ++ + +E + I+GH D G R + L L RA +V
Sbjct: 230 RVFFDTNKSNIKDQYKPEIAKVAEKLVEYPNATARIDGHTDNTGPRALNERLSLARANSV 289
Query: 110 FNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
+ V I SR+ + + P ++ A NRR + G R
Sbjct: 290 KSSLVNEYNIDPSRLTAQGFAWDQPIADNSTKEGRAMNRRVFATITGSR 338
>gi|262042941|ref|ZP_06016085.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259039658|gb|EEW40785.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 568
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 44/115 (38%), Gaps = 2/115 (1%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSI 99
+ FDT + ++P + L + L + ++ GH D +G ++
Sbjct: 426 VAPNVIRLDSMSLFDTGKWVLKPGSTKRLVSSLMDIKARPGWLIVVAGHTDSVGEEKANQ 485
Query: 100 ALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L L+RA +V ++ G V YG+ P + A NRR + L
Sbjct: 486 LLSLKRAESVRDWMRDTGDVPDSCFAVQGYGESRPIATNGTPEGRALNRRVEISL 540
>gi|171315886|ref|ZP_02905116.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
gi|171098982|gb|EDT43770.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
Length = 220
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLR 104
S+ +F T S + A L L + ++H ++G+ D GS + AL R
Sbjct: 110 VSLTGDAYFATDSAVLTSAANAALDKLLNQQGDRHFARVEVDGYTDATGSDAHNQALSKR 169
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RA AV Y G+ A T +G+ P+ + A+NRR + L+
Sbjct: 170 RADAVAAYLREHGLKADSFAATGHGEANPAASNDTVEGRARNRRVEISLQ 219
>gi|104779940|ref|YP_606438.1| outer membrane lipoprotein [Pseudomonas entomophila L48]
gi|95108927|emb|CAK13623.1| putative outer membrane lipoprotein (OmpA domain) [Pseudomonas
entomophila L48]
Length = 166
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 51/140 (36%), Gaps = 6/140 (4%)
Query: 20 GIDNLDTKISSPDTVLN-----ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
G ++ K +P+ V + E ++ + V F + S+ A ++ +G
Sbjct: 24 GCQSVPPKGLTPEQVAVLKREGFAPTDEGWAFDLSGKVLFGSDLDSLNSASESIVERIGK 83
Query: 75 WL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
L I+GHAD G + L RRA +V + G+ ++ G P
Sbjct: 84 ALLSVDIQRVRIDGHADASGKAAYNQQLSERRAQSVAKALIGIGMQPQNIQTRGLGSSQP 143
Query: 134 SVYGHDEDAYAKNRRAIVFL 153
+NRR + +
Sbjct: 144 VADNRTSTGRMENRRVSIVV 163
>gi|325918947|ref|ZP_08181016.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Xanthomonas vesicatoria ATCC 35937]
gi|325534834|gb|EGD06761.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Xanthomonas vesicatoria ATCC 35937]
Length = 365
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 54/139 (38%), Gaps = 8/139 (5%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDF 83
D +S S V FD + ++RP +LS L+++
Sbjct: 227 DKCPASQPGQTIGPDGCPVPVSIDLKGVNFDFNKSTLRPDAQSILSEATEILKRYPDLKV 286
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYG----- 137
+ GH D G+ + L RRA V++Y G+ ASR+ YG+ P
Sbjct: 287 EVAGHTDSKGTDAYNQKLSERRATTVYDYLTKNGVDASRLVGPIGYGESRPIAPNANPDG 346
Query: 138 -HDEDAYAKNRRAIVFLKG 155
+ + AKNRR + ++
Sbjct: 347 SDNPEGRAKNRRTELNVQN 365
>gi|304397299|ref|ZP_07379178.1| type IV / VI secretion system protein, DotU family [Pantoea sp. aB]
gi|304355448|gb|EFM19816.1| type IV / VI secretion system protein, DotU family [Pantoea sp. aB]
Length = 412
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 52/131 (39%), Gaps = 4/131 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
K ++ ++ ++ F +++ +R + V+ + + + +
Sbjct: 264 KPEIDAGLVAVRDEADRSVVTLKGDGLFASAATDVRGRYVDVIQRIAAAMNNVSGQIQVI 323
Query: 87 GHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
G++D + S+ L L RA +V + + SR+K G+ P V + +
Sbjct: 324 GYSDNVPIRSARFGSNFELSLARARSVQSLLQQQLADPSRVKAEGRGESNPLVPNNSAEN 383
Query: 143 YAKNRRAIVFL 153
A+NRR + L
Sbjct: 384 RARNRRVEITL 394
>gi|302381978|ref|YP_003817801.1| peptidoglycan-associated lipoprotein [Brevundimonas subvibrioides
ATCC 15264]
gi|302192606|gb|ADL00178.1| peptidoglycan-associated lipoprotein [Brevundimonas subvibrioides
ATCC 15264]
Length = 184
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 22/166 (13%)
Query: 4 STIFIILSAITMMSIS-------GIDNLDTKIS--------------SPDTVLNESSLQE 42
+ L+A++M + + D ++ T ++
Sbjct: 8 KIALVGLAALSMAACTPRRPVTGATDGTGGAVANNPVYPGPGNGGIDGGATGPAAMGSEQ 67
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIAL 101
F +VGD ++FD SY + P L +W IEG+ADE G+R ++AL
Sbjct: 68 DFVVNVGDRIYFDLDSYQVSPEAYPRLDAQAAWLQRYPQVQVRIEGNADERGTREYNLAL 127
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
G RRA ++ NY + RG+ A R+ S+GKE P G +EDA+A+NR
Sbjct: 128 GARRAESIRNYLIDRGVPAGRIDTISFGKERPIAQGANEDAWARNR 173
>gi|257459073|ref|ZP_05624192.1| OmpA family protein [Campylobacter gracilis RM3268]
gi|257443458|gb|EEV18582.1| OmpA family protein [Campylobacter gracilis RM3268]
Length = 157
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 4/156 (2%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M++ + I A ++S + +S ++L Q S VG +V+FD ++
Sbjct: 1 MKHLVLSSIAVAALLLSGCSKKTPEADTTSTSGADRLAALASQIQSEVG-TVYFDFDKFN 59
Query: 61 IRPADIQVLSNLGSWLEK---HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG 117
IR ++N + + +EG+ DE GS + ALGL+RA A + VA+G
Sbjct: 60 IRADQQGTINNNAALFNQAGAESLTVKVEGNCDEWGSDEYNYALGLKRATAAKDALVAQG 119
Query: 118 ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ SR+ V SYG+ + H ++ A+NRR +
Sbjct: 120 VNESRISVVSYGESNMACTEHSKECDAQNRRDEFKV 155
>gi|242277549|ref|YP_002989678.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
gi|242120443|gb|ACS78139.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
Length = 172
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 53/154 (34%), Gaps = 5/154 (3%)
Query: 1 MQYSTIFII-LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSY 59
M+ I+ + + S +G D ++ + + + +
Sbjct: 1 MKKFAFLIMFIFSCIPFSYAGQDGFAANSDDILRMITDPGGRVFLKIEFKVNSAKISEKA 60
Query: 60 SIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYF-VARGI 118
+ L + + GH D G + +L L+RA +V NY V I
Sbjct: 61 NPVVDS---LGVALTSGPGQSMQVRLVGHTDSAGKSEYNRSLSLKRAESVRNYLAVHFNI 117
Query: 119 SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+R++V G++ P + A+NRR V
Sbjct: 118 DPARIEVQGMGEDQPIASNENAQGRAQNRRVEVI 151
>gi|110679377|ref|YP_682384.1| peptidoglycan-associated lipoprotein, putative [Roseobacter
denitrificans OCh 114]
gi|109455493|gb|ABG31698.1| peptidoglycan-associated lipoprotein, putative [Roseobacter
denitrificans OCh 114]
Length = 170
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 51/121 (42%), Positives = 68/121 (56%), Gaps = 1/121 (0%)
Query: 34 VLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADEL 92
N+ + F+ +VGD V F SI PA L WL D +IEGHADE
Sbjct: 44 SANDPNSPAFFNQTVGDRVLFAVDESSINPAGQTTLEGQAQWLLANTDYTAVIEGHADEQ 103
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
G+R ++ALG RRA AV Y ++RG++ +R++ SYGKE P E+ YAKNRRA+
Sbjct: 104 GTREYNVALGARRANAVREYLISRGVAGNRLQTVSYGKERPIEICSSEECYAKNRRAVTV 163
Query: 153 L 153
L
Sbjct: 164 L 164
>gi|304398526|ref|ZP_07380399.1| OmpA/MotB domain protein [Pantoea sp. aB]
gi|304354031|gb|EFM18405.1| OmpA/MotB domain protein [Pantoea sp. aB]
Length = 570
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 40/103 (38%), Gaps = 2/103 (1%)
Query: 53 FFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FD+ ++ ++L N L K ++ GH D G+ + L LRRA AV +
Sbjct: 440 LFDSGKAVLKTGSTRMLVNSLVGIKAKPGWLIVVSGHTDNTGNPQLNQTLSLRRAAAVRD 499
Query: 112 YFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ G V YG+ P A NRR + L
Sbjct: 500 WMRDTGDVPESCFAVQGYGESRPVATNDTPAGRALNRRVEISL 542
>gi|224373185|ref|YP_002607557.1| OmpA/MotB [Nautilia profundicola AmH]
gi|223588582|gb|ACM92318.1| OmpA/MotB [Nautilia profundicola AmH]
Length = 258
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 46/130 (35%), Gaps = 9/130 (6%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPA----DIQVLSNLGSWLEKHDCDFLIEG 87
+ +E F + + F S I ++ ++ + + + I+G
Sbjct: 107 GPAIVLEEGEEGFFIRLPADITFKPGSAQITDEDSLLFLKRIALIIKEYLPKNIEIQIKG 166
Query: 88 HADELGS-----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
+ D + L RA +V + G++ ++ +YG+ P +
Sbjct: 167 YTDNQPPPPTSPYADNWELSAARALSVLKILIKDGVNPKQLSAAAYGEYHPIAANATPEG 226
Query: 143 YAKNRRAIVF 152
AKNRR ++
Sbjct: 227 RAKNRRVEIW 236
>gi|83648502|ref|YP_436937.1| flagellar motor protein MotB [Hahella chejuensis KCTC 2396]
gi|83636545|gb|ABC32512.1| Flagellar motor protein [Hahella chejuensis KCTC 2396]
Length = 326
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 46/128 (35%), Gaps = 5/128 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ + + + V + F + S + P V+ L L+ + +EGH+D
Sbjct: 160 NNQVEVETRGRKIVIRVQEKGSFSSGSADLNPEFYPVIDKLVELLKSMEGSISVEGHSDS 219
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ S+ L RA V + G SR + Y P + A+N
Sbjct: 220 IPIRTARFRSNWDLSAARALEVAHALFESGELEPSRFSIAGYADTKPLAPNDSAENRARN 279
Query: 147 RRAIVFLK 154
RR + L+
Sbjct: 280 RRVEIILQ 287
>gi|296329693|ref|ZP_06872178.1| flagellar motor protein MotB [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305674090|ref|YP_003865762.1| motility protein B; MotB component of the stator flagellum complex
[Bacillus subtilis subsp. spizizenii str. W23]
gi|296153191|gb|EFG94055.1| flagellar motor protein MotB [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305412334|gb|ADM37453.1| motility protein B; MotB component of the stator flagellum complex
[Bacillus subtilis subsp. spizizenii str. W23]
Length = 261
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 48/128 (37%), Gaps = 6/128 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+ L E ++ DS+FFD+ +IR D+ + + + + + +I GH D
Sbjct: 123 EHQLETKMTSEGLLITIKDSIFFDSGKATIRKEDVPLAKEISNLLVINPPRNIIISGHTD 182
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ S+ L + RA + A YG+ P + +K
Sbjct: 183 NMPIKNSEFQSNWHLSVMRAVNFMGLLIENPKLDAKVFSAKGYGEYKPVASNKTAEGRSK 242
Query: 146 NRRAIVFL 153
NRR V +
Sbjct: 243 NRRVEVLI 250
>gi|291619700|ref|YP_003522442.1| Hypothetical Protein PANA_4147 [Pantoea ananatis LMG 20103]
gi|291154730|gb|ADD79314.1| Hypothetical Protein PANA_4147 [Pantoea ananatis LMG 20103]
Length = 595
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 2/119 (1%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSR 95
+S+ + FD+ +++ ++L N L K ++ GH D G+
Sbjct: 449 STSIPVPKIVRLDSMSLFDSGKSALKDGSTKMLVNSLVGIKAKPGWLIIVSGHTDNTGNP 508
Query: 96 NSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ AL L+RA AV N+ G V YG+ P + A NRR + L
Sbjct: 509 QLNQALSLKRAEAVRNWMRDTGGVPESCFAVQGYGESRPVAANGTPEGRALNRRVEISL 567
>gi|255534904|ref|YP_003095275.1| OmpA/MotB domain protein [Flavobacteriaceae bacterium 3519-10]
gi|255341100|gb|ACU07213.1| OmpA/MotB domain protein [Flavobacteriaceae bacterium 3519-10]
Length = 230
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 2/134 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDS-VFFDTSSYSIRPADIQVLSNLGSW-LEKH 79
D +I + E ++ ++ V F S + A L L
Sbjct: 83 DKQAKEIKETLPGAEVERVGEGIRVTMKENMVNFGFDSSELTSAAKTNLDKLAQVLKNNM 142
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
D + I GH D G+ +++L RRA AV +Y +++G+++SRM G++ P
Sbjct: 143 DTNINIYGHTDSKGTDAYNLSLSERRAAAVRSYLISQGVASSRMLTMGVGEKEPVASNDT 202
Query: 140 EDAYAKNRRAIVFL 153
+ A+NRR +
Sbjct: 203 DAGRAENRRVEFAI 216
>gi|329297799|ref|ZP_08255135.1| putative outer membrane lipoprotein [Plautia stali symbiont]
Length = 177
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHAD 90
T ++ + + ++ ++V FD+SS +++PA L+ + L+++ + G D
Sbjct: 51 GTGVSVTRQGDNIVLNMPNNVTFDSSSANLKPAGANTLTGVAMVLKEYPKAAVNVVGFTD 110
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G+R ++ L +RA +V + + +G++ +R++ G + P E A+NRR
Sbjct: 111 STGTRALNMRLSQQRAESVASALIVQGVAQNRLRTQGMGPDNPVASNSTEAGKAQNRRVE 170
Query: 151 V 151
+
Sbjct: 171 I 171
>gi|237799262|ref|ZP_04587723.1| flagellar motor protein MotD [Pseudomonas syringae pv. oryzae str.
1_6]
gi|237806231|ref|ZP_04592935.1| flagellar motor protein MotD [Pseudomonas syringae pv. oryzae str.
1_6]
gi|331022118|gb|EGI02175.1| flagellar motor protein MotD [Pseudomonas syringae pv. oryzae str.
1_6]
gi|331027345|gb|EGI07400.1| flagellar motor protein MotD [Pseudomonas syringae pv. oryzae str.
1_6]
Length = 296
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 42/115 (36%), Gaps = 4/115 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ S+ F + ++ + +++ D +EG D+ ++
Sbjct: 130 IEIELNSSLLFVSGDAMPSDKAFTIIEKVSDIVKRFDNPIHVEGFTDDQPIRTAQFPTNW 189
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L R+ ++ G++ +R+ YG+ P AKNRR ++ +
Sbjct: 190 ELSSARSASIVRMLAMDGVNPARLASVGYGEFQPVASNATAAGRAKNRRVVLVIS 244
>gi|251794146|ref|YP_003008877.1| OmpA/MotB domain protein [Paenibacillus sp. JDR-2]
gi|247541772|gb|ACS98790.1| OmpA/MotB domain protein [Paenibacillus sp. JDR-2]
Length = 272
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 48/133 (36%), Gaps = 6/133 (4%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLI 85
K + + L Q Q ++ D+ F + S +++ ++ +N+ LE + + ++
Sbjct: 121 KKNGLSSELETKLNQSQLMITISDNALFASGSDALKTESKELAANISKMLEPYTGYEIVV 180
Query: 86 EGHADELGSRNSSIAL-----GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
GH D+ R + R + + R YG+ P
Sbjct: 181 SGHTDDQPIRTQNFKSNWDLSSSRAIRFMDVLLQNSKLKPERFSAIGYGEYRPVASNDTT 240
Query: 141 DAYAKNRRAIVFL 153
AKNRR V +
Sbjct: 241 AGRAKNRRVEVSI 253
>gi|162454125|ref|YP_001616492.1| putative outer membrane protein [Sorangium cellulosum 'So ce 56']
gi|161164707|emb|CAN96012.1| putative outer membrane protein [Sorangium cellulosum 'So ce 56']
Length = 274
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 2/111 (1%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD--CDFLIEGHADELGSRNSSIALG 102
+ + FDTS +IRP + L L ++++H IEGH D S + AL
Sbjct: 67 QVYIEGKIVFDTSKATIRPGSEKTLETLLQFIKEHPEVTRLRIEGHTDAQSSEEHNQALS 126
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RRA AV ++ V +++ R+ +G+ P ++NRR +
Sbjct: 127 ARRALAVADWLVDHEVASDRLIAVGFGESRPLGPNEIAAGRSENRRVEFHV 177
>gi|118588450|ref|ZP_01545859.1| probable outer membrane lipoprotein [Stappia aggregata IAM 12614]
gi|118439156|gb|EAV45788.1| probable outer membrane lipoprotein [Stappia aggregata IAM 12614]
Length = 162
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 37/146 (25%), Positives = 61/146 (41%), Gaps = 2/146 (1%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVL 69
L+ ++ ++ ++ +E+F +VG ++FD S + +
Sbjct: 6 LAGCNSAGGLSSPDVTNAPAAGFGNIS-PGSEEEFIINVGRRIYFDQGSAVVTDEARITI 64
Query: 70 SNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
N W + I+GHAD+ GS + L +RA AV V G+S RM V Y
Sbjct: 65 ENQAKWLNKNKKWLVKIQGHADDPGSEAAQKTLSTQRANAVMAELVKLGVSPKRMWVKGY 124
Query: 129 GKEMPSVYGHDEDAYAKNRRAIVFLK 154
G E P ++NRR +V L+
Sbjct: 125 GVERPVTDCDQVTCQSQNRRVVVNLR 150
>gi|331004883|ref|ZP_08328300.1| Outer membrane protein [gamma proteobacterium IMCC1989]
gi|330421337|gb|EGG95586.1| Outer membrane protein [gamma proteobacterium IMCC1989]
Length = 197
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 58/137 (42%), Gaps = 2/137 (1%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
N++ + Q S GD+ F T+S ++ A L+ + +
Sbjct: 57 ACGNVEAVKAVKVVPTPAPKAVSQAVSLSGDANF-ATNSAELKDAGKAALNTFATRAKAL 115
Query: 80 DCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ + GHAD G+ + + AL +RA V +Y ++GI S ++ G+ P
Sbjct: 116 NVSGISVVGHADSRGAESYNQALSEKRANTVKSYLESQGIVGSLIRAEGQGETSPVASND 175
Query: 139 DEDAYAKNRRAIVFLKG 155
+ A+NRR + ++G
Sbjct: 176 TAEGRAQNRRVDITVRG 192
>gi|295096555|emb|CBK85645.1| peptidoglycan-associated lipoprotein [Enterobacter cloacae subsp.
cloacae NCTC 9394]
Length = 173
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 52/172 (30%), Positives = 79/172 (45%), Gaps = 20/172 (11%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDTVLNESSLQE-------------- 42
MQ + + I L + + + S N S + + +
Sbjct: 1 MQLNKVLKGLMIALPVMAIAACSSNKNASNDQSGEGMMGAGTGMDANGNGNMSSEEQARL 60
Query: 43 -QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIA 100
+ V+FD Y IR +L ++L + +EGHADE G+ +I+
Sbjct: 61 QMQQLQQNNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADERGTPEYNIS 120
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
LG RRA AV Y +G+SA ++ + SYGKE P+V GHDE AY+KNRRA++
Sbjct: 121 LGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYSKNRRAVLV 172
>gi|269793616|ref|YP_003313071.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Sanguibacter keddieii DSM 10542]
gi|269095801|gb|ACZ20237.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Sanguibacter keddieii DSM 10542]
Length = 430
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 33/154 (21%), Positives = 59/154 (38%), Gaps = 13/154 (8%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFS-----SSVGDSVFFDTSSYSIRPADI 66
+++ +D V E + ++ D+ FD +++RP
Sbjct: 275 GTALVNGVPVDAEPLPPVPRMGVFPPMGTIEPIASCGTTITLSDAALFDFGKHTLRPESQ 334
Query: 67 QVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
Q L +L + L + I GH D + + L RA AV + V RG++A+ ++
Sbjct: 335 QTLDSLAAALAETGAPVLQIGGHTDSISDDAFNQTLSEDRAQAVADGLVERGVTAT-LET 393
Query: 126 TSYGKEMPSVYG------HDEDAYAKNRRAIVFL 153
T YG+ P + NRR +F+
Sbjct: 394 TGYGETQPVAPETTADGADNPAGRQLNRRVEIFV 427
>gi|213156444|ref|YP_002318864.1| OmpA/MotB domain protein [Acinetobacter baumannii AB0057]
gi|213055604|gb|ACJ40506.1| OmpA/MotB domain protein [Acinetobacter baumannii AB0057]
Length = 255
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 1/106 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
+ F++ S + A ++L + + I GH D G ++ L RA
Sbjct: 149 NRIIEFESGSAVLTEAGQKILDEMAVALNKVGREKVKIVGHTDSSGDATKNLKLSQDRAL 208
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV NY +++ I A + G P + KNRR +
Sbjct: 209 AVKNYLISKNIPADHLSTEGLGSSKPVADNTSAEGRKKNRRIEFTV 254
>gi|148262600|ref|YP_001229306.1| OmpA/MotB domain-containing protein [Geobacter uraniireducens Rf4]
gi|146396100|gb|ABQ24733.1| OmpA/MotB domain protein [Geobacter uraniireducens Rf4]
Length = 199
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 45/129 (34%), Positives = 67/129 (51%), Gaps = 1/129 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFL 84
T + D ++ + + + +FFD SY++ P L+N + ++
Sbjct: 68 TSLPGGDIANTNTANADARPEAALEKIFFDFDSYALTPIARDTLTNNAKIMGKRAGVKIQ 127
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
IEGH DELGS ++ALG +RA + Y V G+ A R+ V SYGKE P+ GH E A+A
Sbjct: 128 IEGHCDELGSDEYNLALGEKRAKSAMQYLVTMGVPAQRLAVISYGKEKPADPGHGEAAWA 187
Query: 145 KNRRAIVFL 153
KNRR +
Sbjct: 188 KNRRNEFVI 196
>gi|298208747|ref|YP_003716926.1| OmpA family protein [Croceibacter atlanticus HTCC2559]
gi|83848674|gb|EAP86543.1| OmpA family protein [Croceibacter atlanticus HTCC2559]
Length = 233
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDS--VFFDTSSYSIRPADIQVLSNLGSW-LEK 78
D KI + + + ++ V+FDT+ +I + L L + +E
Sbjct: 81 DKQAQKIEQEIPGAQVERIDDGIVVTFDENSGVYFDTNKSNINAKSQETLDKLSNVLVEY 140
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ D L+ GH D GS +++L RA +V NYF ++G+S+ R +G+ P+
Sbjct: 141 PNTDVLVVGHTDSTGSAEYNMSLSRDRANSVTNYFTSKGLSSGRFTTKWFGETKPAYTND 200
Query: 139 DEDAYAKNRRAIVFL 153
+ AKNRR + +
Sbjct: 201 TAEGRAKNRRVQLAI 215
>gi|325267796|ref|ZP_08134446.1| OmpA family protein [Kingella denitrificans ATCC 33394]
gi|324980677|gb|EGC16339.1| OmpA family protein [Kingella denitrificans ATCC 33394]
Length = 221
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 52/124 (41%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHA 89
+T + Q ++ +++ F T+S ++ L+ L + ++ + GH
Sbjct: 88 ANTGVEVERKGNQIKLTMPENITFATNSAALSAQAQNALATAAETLAKYNETTITVVGHT 147
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G+ + L RA AV ++ G++ RM V G P + E A+NRR
Sbjct: 148 DSTGNDAINNPLSYNRANAVSSFLAQHGVATQRMTVLGQGSRQPIADNNTEAGRAQNRRV 207
Query: 150 IVFL 153
+ +
Sbjct: 208 EILI 211
>gi|288818260|ref|YP_003432608.1| hypothetical protein HTH_0948 [Hydrogenobacter thermophilus TK-6]
gi|288787660|dbj|BAI69407.1| hypothetical protein HTH_0948 [Hydrogenobacter thermophilus TK-6]
gi|308751857|gb|ADO45340.1| OmpA/MotB domain protein [Hydrogenobacter thermophilus TK-6]
Length = 334
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 1/107 (0%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
V + FD YSI+ I +L+ + E + IEG+ D +G++ + L ++RA
Sbjct: 222 VSARIHFDFDKYSIKREYIPLLNEVVKTLKENPNVRVRIEGYTDNIGTKAYNDKLAMKRA 281
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV +Y V GI SR+ +GKE NRRA +
Sbjct: 282 KAVKDYLVKHGIEESRIDTVGFGKERYIASNETAIGRFTNRRADFII 328
>gi|317491523|ref|ZP_07949959.1| OmpA family protein [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316921070|gb|EFV42393.1| OmpA family protein [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 564
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 51/128 (39%), Gaps = 2/128 (1%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIE 86
P+ V ++ + + + FDT+S ++ +VL L + +I
Sbjct: 421 PPPPEKVEQKAKVVIPKAVRLDSLSLFDTNSAKLKSGSTKVLVTALVDIKAQPGWLIVIA 480
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAK 145
GH D G+ ++AL RA AV ++ + G + V YG P + A
Sbjct: 481 GHTDATGNAQRNLALSQARAEAVRDWMRSMGDIPVTCFAVQGYGASQPIASNETDAGRAA 540
Query: 146 NRRAIVFL 153
NRR + L
Sbjct: 541 NRRVDIRL 548
>gi|121603984|ref|YP_981313.1| OmpA/MotB domain-containing protein [Polaromonas naphthalenivorans
CJ2]
gi|120592953|gb|ABM36392.1| OmpA/MotB domain protein [Polaromonas naphthalenivorans CJ2]
Length = 220
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 1/129 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFL 84
+ ++ V + + + V FD +I+ VL+N + +
Sbjct: 86 ERATAGTGVAVSQTQDNRLKLDIPSDVSFDVGRSAIKSNFAPVLTNFATSLNQNPITTVS 145
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
I GH D GS + + L + RA A +Y V RG++A R+ G P A
Sbjct: 146 IIGHTDSTGSDSVNNPLSVDRANAARDYLVGRGVAAQRIATDGRGSREPIADNSSAQGRA 205
Query: 145 KNRRAIVFL 153
KNRR +++
Sbjct: 206 KNRRVEIYV 214
>gi|182418302|ref|ZP_02949597.1| chemotaxis protein MotB [Clostridium butyricum 5521]
gi|237666437|ref|ZP_04526422.1| chemotaxis protein MotB [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182377684|gb|EDT75228.1| chemotaxis protein MotB [Clostridium butyricum 5521]
gi|237657636|gb|EEP55191.1| chemotaxis protein MotB [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 244
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 53/130 (40%), Gaps = 5/130 (3%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGH 88
+ +T ++ + + + D++ F++ + ++L + + + +IEGH
Sbjct: 109 NQLNTTIDIAQDENGVVLQLRDNILFESGKADLIDGSSEILDKINTLISTLPNSIVIEGH 168
Query: 89 ADELGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAY 143
D + + L RA V YF +G +R YG+ P V ++
Sbjct: 169 TDNVPISTSIYKDNWDLSTARASNVLRYFTQLKGQDPTRFSAAGYGEYRPKVDNSTDENR 228
Query: 144 AKNRRAIVFL 153
A+NRR + +
Sbjct: 229 AQNRRVNILI 238
>gi|152982971|ref|YP_001354367.1| outer membrane protein A precursor [Janthinobacterium sp.
Marseille]
gi|151283048|gb|ABR91458.1| outer membrane protein A precursor [Janthinobacterium sp.
Marseille]
Length = 206
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Query: 58 SYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
++P L +L S L + + +I GH D +GS + L +RRA AV Y V +
Sbjct: 105 KAVLKPEGKAKLDDLTSKLNGLNLEVIIAVGHTDSVGSDAYNQKLSVRRAEAVKAYLVGK 164
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
G+ A R+ G++ P A+NRR + + G R
Sbjct: 165 GVDAKRVYTEGKGEKQPVATNKTAAGRAQNRRVEIEVVGTR 205
>gi|42524180|ref|NP_969560.1| putative outer membrane protein [Bdellovibrio bacteriovorus HD100]
gi|39576388|emb|CAE80553.1| putative outer membrane protein [Bdellovibrio bacteriovorus HD100]
Length = 214
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 58/130 (44%), Gaps = 1/130 (0%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF- 83
D + + ++ + + + FDT ++PA ++ L + ++K+ +
Sbjct: 75 DKQQKELAKIAETKRTEQGLITKLKSDILFDTGKADLKPAAQTNINQLAAIMKKYPENIL 134
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
++G+ D+ GS+ + L +RA AV VA G+ A + G P ++A
Sbjct: 135 TVKGYTDDTGSQMVNNPLSEQRAKAVSAQLVAAGVPAQTVTSIGMGALNPVDPAKTKEAR 194
Query: 144 AKNRRAIVFL 153
AKNRR + +
Sbjct: 195 AKNRRVEIEI 204
>gi|84516651|ref|ZP_01004010.1| peptidoglycan-associated lipoprotein [Loktanella vestfoldensis
SKA53]
gi|84509687|gb|EAQ06145.1| peptidoglycan-associated lipoprotein [Loktanella vestfoldensis
SKA53]
Length = 176
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 48/130 (36%), Positives = 70/130 (53%), Gaps = 1/130 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFL 84
+ ++ F+ ++GD V F +I P +L WL D +
Sbjct: 41 DATTGMAGSASDPRSPAFFNQTIGDRVLFAIDQSTISPEGRTILDGQAQWLLTNADYRAV 100
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
IEGHADE G+R ++ALG RRA AV Y V+RG+ ++R++VTSYGKE P +E Y+
Sbjct: 101 IEGHADEQGTREYNLALGFRRANAVREYLVSRGVPSARLEVTSYGKERPIEVCSNEACYS 160
Query: 145 KNRRAIVFLK 154
+NRRA+ L
Sbjct: 161 QNRRAVTVLS 170
>gi|226942084|ref|YP_002797158.1| Pal [Laribacter hongkongensis HLHK9]
gi|226717011|gb|ACO76149.1| Pal [Laribacter hongkongensis HLHK9]
Length = 169
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 71/169 (42%), Gaps = 13/169 (7%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTK------------ISSPDTVLNESSLQEQFSSSV 48
M ++ + + + + D + T N L++ +
Sbjct: 1 MLKQSLSALAVVTLLAACASTKPADPNANANAAGANQGATAGQMTSGNVDPLKDPNNILS 60
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAY 107
SV+FD S +++ V+ +L+++ I+G+ D GSR ++ALG RR+
Sbjct: 61 KRSVYFDFDSSAVKGEYRPVVEAHAQYLKQNTARKAQIQGNTDARGSREYNLALGQRRSE 120
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
+V G+ ++++ S+GKE P G YA+NRRA V G
Sbjct: 121 SVKQAMRVLGVPEAQLEAVSFGKEKPRATGTTAADYAENRRADVVYDGE 169
>gi|161504516|ref|YP_001571628.1| hypothetical protein SARI_02629 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160865863|gb|ABX22486.1| hypothetical protein SARI_02629 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 559
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 2/103 (1%)
Query: 53 FFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FD+ ++P ++L N L + ++ GH D GS + L L+RA AV N
Sbjct: 428 LFDSGKSVLKPGSTKMLVNSLLGIKARPGWLIVVSGHTDNTGSVQLNQTLSLQRAEAVRN 487
Query: 112 YFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ G V YG P D A NRR + L
Sbjct: 488 WMRDTGDVPESCFAVQGYGDSRPIASNDTPDGRAHNRRVEISL 530
>gi|126728387|ref|ZP_01744203.1| OmpA/MotB family protein [Sagittula stellata E-37]
gi|126711352|gb|EBA10402.1| OmpA/MotB family protein [Sagittula stellata E-37]
Length = 168
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 53/161 (32%), Positives = 80/161 (49%), Gaps = 14/161 (8%)
Query: 7 FIILSAITMMSISGIDNLDTKISSPDT-------------VLNESSLQEQFSSSVGDSVF 53
++++A + + + D ++ + +++ + F+ VGD V
Sbjct: 1 MMLVAAFGLAACANPDRFGANGANDASRNGGGVSSGVIPGSVDDPTSTAYFNQRVGDRVL 60
Query: 54 FDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F S+ P VL W + D +IEGHADE G+R ++ALG RRA AV Y
Sbjct: 61 FAVDQSSLSPEARTVLDGQAQWLMTNSDYMAVIEGHADEQGTREYNLALGARRANAVMEY 120
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V+RG+S SR+K SYGKE P +E YAKNRRA+ +
Sbjct: 121 LVSRGVSQSRLKFVSYGKERPIEICSEEACYAKNRRAVTVI 161
>gi|30314444|gb|AAP15431.1| outer membrane lipoprotein precursor [Burkholderia pyrrocinia]
Length = 149
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 43/136 (31%), Positives = 72/136 (52%), Gaps = 2/136 (1%)
Query: 19 SGIDNLDTKISSPDTV-LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
+ + T+ S+ + +N L + S S++FD SYS++ ++ +L+
Sbjct: 11 ANAGAVSTQPSADNVAQVNVDPLNDPNSPLAKRSIYFDFDSYSVKDEYQPLMQQHAQYLK 70
Query: 78 KHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
H LI+G+ DE G+ ++ALG +RA AV G++ S+M+ S GKE P
Sbjct: 71 SHPQRHVLIQGNTDERGTSEYNLALGQKRAEAVRRAMALLGVNDSQMEAVSLGKEKPQAT 130
Query: 137 GHDEDAYAKNRRAIVF 152
GHDE ++A+NRRA +
Sbjct: 131 GHDEASWAQNRRADLV 146
>gi|78186498|ref|YP_374541.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins-like [Chlorobium luteolum DSM 273]
gi|78166400|gb|ABB23498.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins-like protein [Chlorobium luteolum DSM
273]
Length = 154
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 67/156 (42%), Gaps = 8/156 (5%)
Query: 1 MQYSTIF---IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS 57
M+ + + A+ + + VFFD
Sbjct: 1 MKNLKPLARILCVPAMLFIGACSCQKDVAVAP----EPPPPPPPAAAAVPALGDVFFDFD 56
Query: 58 SYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
++R + L N +W++ + ++EGH DE G+ ++ALG RRA + Y V+
Sbjct: 57 QSALRMDAVSQLKNNAAWMDANRSKRVIVEGHCDERGTNEYNMALGERRASSAKEYIVSL 116
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
GIS R++ SYG+E P G E+A+A+NRRA
Sbjct: 117 GISPERIETLSYGEEKPFAQGSTEEAWAQNRRAHFV 152
>gi|56551062|ref|YP_161901.1| peptidoglycan-associated lipoprotein [Zymomonas mobilis subsp.
mobilis ZM4]
gi|241761362|ref|ZP_04759450.1| peptidoglycan-associated lipoprotein [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|260753277|ref|YP_003226170.1| peptidoglycan-associated lipoprotein [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
gi|56542636|gb|AAV88790.1| peptidoglycan-associated lipoprotein [Zymomonas mobilis subsp.
mobilis ZM4]
gi|241374269|gb|EER63766.1| peptidoglycan-associated lipoprotein [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|258552640|gb|ACV75586.1| peptidoglycan-associated lipoprotein [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
Length = 176
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 50/174 (28%), Positives = 75/174 (43%), Gaps = 23/174 (13%)
Query: 1 MQYSTIFIILSA-ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG---------- 49
M S + I L A + ++ T P + ++ VG
Sbjct: 1 MTKSKLTISLFAGLVALTACSDHQPKTASLPPAPTTKAPAPTSNGNADVGAVRDTVVPGS 60
Query: 50 ----------DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSS 98
D V F +S+ + +L W +K+ IEGH DE G+R +
Sbjct: 61 HADFLRQVGTDMVHFALNSHDLDSEAKAILDREIQWFKKYPSTRVTIEGHCDERGTREYN 120
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
IALG +RA AV +Y A+ A+ + V SYGKE P G DE+++A+NRRA+
Sbjct: 121 IALGEKRADAVRDYL-AKAGVANSINVISYGKERPLAMGSDEESWAQNRRAVTV 173
>gi|315644424|ref|ZP_07897557.1| OmpA/MotB domain protein [Paenibacillus vortex V453]
gi|315280174|gb|EFU43467.1| OmpA/MotB domain protein [Paenibacillus vortex V453]
Length = 273
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 6/117 (5%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIAL 101
Q ++ D+ F + ++P ++ + + D + ++ GH D + NS
Sbjct: 137 QLVITIRDNALFPSGEAVVKPEARKLAKAISQMLHKFPDYEIIVSGHTDNVPIANSRYPS 196
Query: 102 -----GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
R + + R YG+ P E AKNRR V +
Sbjct: 197 NWDLSSDRALQFMKILLTNSALDPKRFMPIGYGEYHPIADNKTEAGRAKNRRVEVSI 253
>gi|30314412|gb|AAP15415.1| outer membrane lipoprotein precursor [Burkholderia vietnamiensis]
Length = 150
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 44/137 (32%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 18 ISGIDNLDTKISSPDTV-LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+ + T+ S+ + +N L + S S++FD SYS++ +L +L
Sbjct: 11 ANNAGAVSTQPSADNVAQVNVDPLNDPNSPLAKRSIYFDFDSYSVKDEYQPLLQQHAQYL 70
Query: 77 EKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+ H LI+G+ DE G+ ++ALG +RA AV G++ S+M+ S GKE P
Sbjct: 71 KSHPQRHVLIQGNTDERGTSEYNLALGQKRAEAVRRAMALLGVNDSQMETVSLGKEKPQA 130
Query: 136 YGHDEDAYAKNRRAIVF 152
GHDE ++A+NRRA +
Sbjct: 131 TGHDETSWAQNRRADLV 147
>gi|39995916|ref|NP_951867.1| OmpA domain-containing protein [Geobacter sulfurreducens PCA]
gi|39982680|gb|AAR34140.1| OmpA domain protein [Geobacter sulfurreducens PCA]
gi|298504930|gb|ADI83653.1| OmpA domain porin [Geobacter sulfurreducens KN400]
Length = 466
Score = 77.2 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 49/121 (40%), Gaps = 2/121 (1%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELG 93
+ + ++ FD +RP + + +L+++ +IEGH D +G
Sbjct: 214 MAAEPTPGLMKYCITLNIEFDIDKADVRPQYHDEVKRVADFLKEYPSTTAVIEGHTDNVG 273
Query: 94 SRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
++ L RRA +V NY V I +R+ +GK P E +NRR
Sbjct: 274 DDAYNMRLSQRRAESVVNYLVDNFGIDRTRLSARGFGKTRPIADNSTEAGKQRNRRIEAI 333
Query: 153 L 153
+
Sbjct: 334 I 334
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRA 106
+ V FDT + I+P ++ +G ++ +IEGH D +G+ + ++ L LRRA
Sbjct: 353 IALKVQFDTDKWDIKPQYRGEIAKVGDFMTRNPTTTAIIEGHTDRVGTADHNMKLSLRRA 412
Query: 107 YAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV NY V I SR+ YG P Y + A NRR +
Sbjct: 413 EAVVNYLVEHFGIERSRLSAKGYGFSRPIAYNSTAEGRALNRRINAII 460
>gi|255319913|ref|ZP_05361114.1| inner membrane lipoprotein YiaD [Acinetobacter radioresistens SK82]
gi|262379192|ref|ZP_06072348.1| type VI secretion system OmpA/MotB [Acinetobacter radioresistens
SH164]
gi|255303046|gb|EET82262.1| inner membrane lipoprotein YiaD [Acinetobacter radioresistens SK82]
gi|262298649|gb|EEY86562.1| type VI secretion system OmpA/MotB [Acinetobacter radioresistens
SH164]
Length = 209
Score = 77.2 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 52/128 (40%), Gaps = 1/128 (0%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLI 85
+ + V + + ++ FDT+ +I+P L+ + E + L+
Sbjct: 78 QQMAGTGVEVNRNPDGSVGLIMPGNITFDTNKSTIKPNFYTTLNKVAQTLTEDNKSAILV 137
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
G+ D G+ + +I L RA AV NY +G+ +R+ G P + +
Sbjct: 138 TGYTDSTGNDSINIPLSQARAQAVANYLAGQGVPRTRINAQGLGASNPIASNATAEGREQ 197
Query: 146 NRRAIVFL 153
NRR + +
Sbjct: 198 NRRVEISI 205
>gi|86139070|ref|ZP_01057641.1| OmpA domain protein [Roseobacter sp. MED193]
gi|85824301|gb|EAQ44505.1| OmpA domain protein [Roseobacter sp. MED193]
Length = 640
Score = 77.2 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 44/130 (33%), Gaps = 1/130 (0%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDF 83
+ Q + + + F+ S ++ VL ++ S +
Sbjct: 471 PPAPKDQPLSTELCAAQLAGAQASSGKISFEPGSATVAGGSSVVLDHIASILEKCGPIRL 530
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
I+GH D G + AL RA ++ N AR I S YG+ P E+
Sbjct: 531 EIQGHTDSQGREGMNQALSQSRAQSILNELRARRIRTSAFIAIGYGESQPIASNDSEEGR 590
Query: 144 AKNRRAIVFL 153
NRR L
Sbjct: 591 EANRRIEFRL 600
>gi|119773835|ref|YP_926575.1| outer membrane protein and related peptidoglycan-associated
(LipO)protein [Shewanella amazonensis SB2B]
gi|119766335|gb|ABL98905.1| outer membrane protein and related peptidoglycan-associated
(LipO)protein [Shewanella amazonensis SB2B]
Length = 484
Score = 77.2 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 2/119 (1%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRN 96
+ Q + D + FD S + P VL L S+L+++ +F + GH D+ G +
Sbjct: 362 TDAITQTGKATLDGLLFDYDSDRMLPESKPVLEVLASYLKQNPALNFYVVGHTDDQGDKA 421
Query: 97 SSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+++L RRA AV A I ++++ G+ P +E ++NRR + L+
Sbjct: 422 YNLSLSERRAAAVVKALGADYQIKPAQLEAHGMGEFSPVASNANEAGQSQNRRVELVLR 480
>gi|322417908|ref|YP_004197131.1| OmpA/MotB domain-containing protein [Geobacter sp. M18]
gi|320124295|gb|ADW11855.1| OmpA/MotB domain protein [Geobacter sp. M18]
Length = 169
Score = 77.2 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 29/169 (17%), Positives = 66/169 (39%), Gaps = 19/169 (11%)
Query: 1 MQYSTIFIILSAITMMSISGID--------------NLDTKISSPDTVLNESSLQEQFSS 46
M ++A+ M+++G+ + ++ + L+ + + +
Sbjct: 1 MLKK---AAIAAVLSMTVAGVAYAGLDAVKGLGKDLGKEAAATAKEGALSAVTKKLKKVQ 57
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRR 105
+ + F T + PA + ++ + + + + ++GH D +G +++ L R
Sbjct: 58 NEKGPIKFKTGKAEVDPACDRTMTAIAAIMTDYPGFHVQVDGHTDNVGKPEANMKLSQDR 117
Query: 106 AYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
A AV Y +G+ A R+ +G P + AKNRR +
Sbjct: 118 ADAVVKYLAEKKGVDAKRLSAKGFGDTQPIASNKTKAGQAKNRRVDFTV 166
>gi|194291785|ref|YP_002007692.1| outer membrane protein; ompa/motb domain [Cupriavidus taiwanensis
LMG 19424]
gi|193225689|emb|CAQ71635.1| putative outer membrane protein; OmpA/MotB domain [Cupriavidus
taiwanensis LMG 19424]
Length = 272
Score = 77.2 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 53/135 (39%), Gaps = 3/135 (2%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-L 76
+G+ T + +E +L +Q + + F+T + ++ P +L + +
Sbjct: 136 ATGLGQSYTVKNGLRVPASEQNLLDQTLA--NRIIEFETGAATLTPKGRAILDEMAAVLP 193
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
I GH D GSR ++ L RA V NY + +G + G + P
Sbjct: 194 RLSGRKIEIVGHTDNSGSRALNLTLSQARAETVKNYLIGKGGEPGMLTAVGVGPDQPVAP 253
Query: 137 GHDEDAYAKNRRAIV 151
E+ AKNRR
Sbjct: 254 NDKEEGRAKNRRIEF 268
>gi|222053440|ref|YP_002535802.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
gi|221562729|gb|ACM18701.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
Length = 455
Score = 77.2 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 53/134 (39%), Gaps = 4/134 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD- 80
D + E S S+ + F T I+P + + +++K+
Sbjct: 316 DKCPGTPKGTKVKADGCPDLETLSMSIN--IQFVTGKNDIQPKYAGEIKKVADYMQKYPT 373
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHD 139
+IEGH D +GS +++ L RRA AV +Y + + A R+ YG P
Sbjct: 374 VKGVIEGHTDNVGSAAANMKLSQRRAEAVRSYLIKKHGIAADRLTAKGYGMTRPIADNGT 433
Query: 140 EDAYAKNRRAIVFL 153
E +NRR L
Sbjct: 434 EAGRQQNRRITAVL 447
>gi|167840769|ref|ZP_02467453.1| hypothetical protein Bpse38_29109 [Burkholderia thailandensis
MSMB43]
Length = 405
Score = 77.2 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 45/132 (34%), Gaps = 4/132 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ +++ ++ + F + S S+ + VL+ + L + +
Sbjct: 259 EPEIAAGLVSVRDEADRSVIVLRGDGLFGSGSTSVIDRYMPVLTRVADALNQVPGSVRVS 318
Query: 87 GHADELGSRN----SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
G+ D+ + S+ L RA AV AR R+ G P
Sbjct: 319 GYTDDTPVHSARFASNWDLSRERAEAVRGLIAARLDRPDRIAAEGRGTLDPVAPNDSPAN 378
Query: 143 YAKNRRAIVFLK 154
A+NRR + L
Sbjct: 379 RARNRRVEITLM 390
>gi|197116705|ref|YP_002137132.1| OmpA family outer membrane protein [Geobacter bemidjiensis Bem]
gi|197086065|gb|ACH37336.1| OmpA family outer membrane protein [Geobacter bemidjiensis Bem]
Length = 169
Score = 77.2 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 54/142 (38%), Gaps = 2/142 (1%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+ + S+ + L+ + + + + + F T I P+ + ++ +
Sbjct: 25 ALKGLGKEAGKGVAASAKEGALSAVTNKLKKVQNEKGPIKFKTGKAEIDPSCDKTMTAIA 84
Query: 74 SWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKE 131
+ + + ++GH D +G ++ L RA AV Y + + A R+ +G
Sbjct: 85 AIMTDYPGFHVQVDGHTDNVGKPEANQKLSQDRADAVVKYLVDKKAVDAKRLSAKGFGDS 144
Query: 132 MPSVYGHDEDAYAKNRRAIVFL 153
P + AKNRR +
Sbjct: 145 KPIADNKTKAGQAKNRRVDFTV 166
>gi|89070199|ref|ZP_01157527.1| OmpA domain protein [Oceanicola granulosus HTCC2516]
gi|89044215|gb|EAR50366.1| OmpA domain protein [Oceanicola granulosus HTCC2516]
Length = 623
Score = 77.2 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 42/124 (33%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHA 89
E L + + S + FD S I +V+ ++ + D + + G+
Sbjct: 474 AALPTPEECLAKIKAISDTRKITFDPGSADIDGDSQRVVDDIAEVLRQCTDLEIEVAGYT 533
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G + L +RA AV R + + YG+ P + NRR
Sbjct: 534 DSQGREEMNQRLSQQRAEAVLAALRLRRVPVGAFRAVGYGEAEPIADNDTAEGREANRRI 593
Query: 150 IVFL 153
L
Sbjct: 594 EFRL 597
>gi|308183230|ref|YP_003927357.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
PeCan4]
gi|308065415|gb|ADO07307.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
PeCan4]
Length = 179
Score = 77.2 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 40/177 (22%), Positives = 75/177 (42%), Gaps = 24/177 (13%)
Query: 1 MQYSTIFIILSAITMMSIS-------------GIDNLDTKISSPDTVLNESSLQEQFSSS 47
M+ S+ F L A ++ + + S +TV + +++ +
Sbjct: 1 MKRSSAFSFLVAFLFIAGCKHNMDKETVAGDVSAKAVQSAPVSTETVQEKQEPKQEPAPV 60
Query: 48 VGDS-----------VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRN 96
V + ++FD Y I+ +D + L + +++ L+EG+ DE GS
Sbjct: 61 VEEKPAIESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEFGSSE 120
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ ALG++R +V N V +G+ +K S+G+ P + Y +NRR V L
Sbjct: 121 YNQALGVKRTLSVKNALVIKGVEKDMIKTISFGETKPKCVQKTRECYRENRRVDVKL 177
>gi|291286231|ref|YP_003503047.1| OmpA/MotB domain protein [Denitrovibrio acetiphilus DSM 12809]
gi|290883391|gb|ADD67091.1| OmpA/MotB domain protein [Denitrovibrio acetiphilus DSM 12809]
Length = 247
Score = 77.2 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 58/130 (44%), Gaps = 4/130 (3%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI 85
K + V+ + ++ S + D + F + S I +L L + +E+ + ++
Sbjct: 97 VKSAQMSQVVTIAETKKGVSVRILDKMLFKSGSAEILDQGKPLLDKLAAVIEESPFNIMV 156
Query: 86 EGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
EGH D++ S+ L RA +V YF+++ +SA R+ + Y + P
Sbjct: 157 EGHTDDIPISTALYPSNWELSTARAVSVVKYFMSKDVSAQRLSASGYAEYHPVTPNISAA 216
Query: 142 AYAKNRRAIV 151
+ KNRR V
Sbjct: 217 SREKNRRVEV 226
>gi|300723438|ref|YP_003712743.1| hypothetical protein XNC1_2522 [Xenorhabdus nematophila ATCC 19061]
gi|297629960|emb|CBJ90580.1| Conserved hypothetical protein with OmpA/MotB domains (probable
component of SST VI cluster) [Xenorhabdus nematophila
ATCC 19061]
Length = 406
Score = 77.2 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 45/125 (36%), Gaps = 6/125 (4%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG- 93
L + + ++ + F +S+ I+ ++ ++ L + L+ G+ D +
Sbjct: 273 LTVTDMSDRSIIVLKGDGLFKSSAIQIKSRYSAIIKHIAEALNSLQGNILVVGYTDNIPV 332
Query: 94 -----SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
S+ AL L RA +V R+ G E P AKNRR
Sbjct: 333 SSRRSHFLSNYALSLARAKSVQRELQRYLNQPERVSAEGKGAENPIAPNDTRSNRAKNRR 392
Query: 149 AIVFL 153
+ L
Sbjct: 393 VEITL 397
>gi|289769405|ref|ZP_06528783.1| secreted protein [Streptomyces lividans TK24]
gi|289699604|gb|EFD67033.1| secreted protein [Streptomyces lividans TK24]
Length = 210
Score = 77.2 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 48/140 (34%), Gaps = 2/140 (1%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
++ + + ++ + + + ++ V F S + + +
Sbjct: 64 ATLAQAKVLDIKSVVEEQSGDERREDTNTSVTLALQAEVLFGKDSSKLGAEAKSRIRGIA 123
Query: 74 SWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKE 131
+ + + G D+LGS L RRA AV + + + +V YG++
Sbjct: 124 DEIRAQNATRVRVFGFTDDLGSSAHGDVLSKRRANAVHDVLSQSLNDAGITYEVRGYGEQ 183
Query: 132 MPSVYGHDEDAYAKNRRAIV 151
P E KNRR V
Sbjct: 184 YPIADNSTEAGRKKNRRVEV 203
>gi|262368608|ref|ZP_06061937.1| peptidoglycan-associated lipoprotein [Acinetobacter johnsonii
SH046]
gi|262316286|gb|EEY97324.1| peptidoglycan-associated lipoprotein [Acinetobacter johnsonii
SH046]
Length = 189
Score = 77.2 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 49/179 (27%), Positives = 81/179 (45%), Gaps = 28/179 (15%)
Query: 1 MQYSTIF---IILSAITMMSIS---------------GIDNLDTKISSPDTVLNESSLQE 42
M+ + I+ +A+ + + G ++T+ S D LN +L
Sbjct: 1 MKSIKLLALPILATALVVTGCASRKPAATIEAGQNPNGSTTVNTQGLSEDAALNAQNLAG 60
Query: 43 QFSSSV---------GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADEL 92
+ V V FD S + D Q L + + + + GH DE
Sbjct: 61 ASAKGVTEANKAFLAKRVVHFDYDSSDLSNDDYQTLQAHAQFLMANANSRVALTGHTDER 120
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
G+R ++ALG RRA AV ++ + G+S ++++ SYGKEMP GHDE+A+ +NRR +
Sbjct: 121 GTREYNMALGERRAKAVESFLITTGVSPNQLEAVSYGKEMPINAGHDENAWKENRRVEI 179
>gi|30314442|gb|AAP15430.1| outer membrane lipoprotein precursor [Burkholderia pyrrocinia]
Length = 149
Score = 77.2 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 43/136 (31%), Positives = 72/136 (52%), Gaps = 2/136 (1%)
Query: 19 SGIDNLDTKISSPDTV-LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
+ + T+ S+ + +N L + S S++FD SYS++ ++ +L+
Sbjct: 11 ANAGAVSTQPSADNVTQVNVDPLNDPNSPLAKRSIYFDFDSYSVKDEYQPLMQQHAQYLK 70
Query: 78 KHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
H LI+G+ DE G+ ++ALG +RA AV G++ S+M+ S GKE P
Sbjct: 71 SHPQRHVLIQGNTDERGTSEYNLALGQKRAEAVRRAMALLGVNDSQMEAVSLGKEKPQAT 130
Query: 137 GHDEDAYAKNRRAIVF 152
GHDE ++A+NRRA +
Sbjct: 131 GHDEASWAQNRRADLV 146
>gi|56696346|ref|YP_166703.1| OmpA family protein [Ruegeria pomeroyi DSS-3]
gi|56678083|gb|AAV94749.1| OmpA family protein [Ruegeria pomeroyi DSS-3]
Length = 415
Score = 77.2 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 36/153 (23%), Positives = 61/153 (39%), Gaps = 8/153 (5%)
Query: 7 FIILSAI--TMMSISGIDNL-----DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSY 59
FI++++ M + + D + ++ V +V + F+ S
Sbjct: 260 FILIASADGAMRGLRSTNGAPFKPYDGEPAAGAVVCARPEPAPPGCGAVLHGIGFNYDSA 319
Query: 60 SIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI 118
+IRP +L+ L L I GH+ G+ + AL RRA +V V G+
Sbjct: 320 AIRPESAVLLNALADGLRGTDAARIEIVGHSSSEGAAEYNRALSQRRAASVVAALVDMGL 379
Query: 119 SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+A R+ G++ P DE + NRR V
Sbjct: 380 AADRLAALGKGEDEPIASNADEAGRSLNRRVEV 412
>gi|294139179|ref|YP_003555157.1| OmpA family protein [Shewanella violacea DSS12]
gi|6141577|dbj|BAA85891.1| unnamed protein product [Shewanella violacea]
gi|293325648|dbj|BAJ00379.1| OmpA family protein [Shewanella violacea DSS12]
Length = 220
Score = 77.2 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 54/127 (42%), Gaps = 1/127 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHAD 90
T ++ + + ++ + V F + P VL+++ +++ + I G+ D
Sbjct: 94 STGVSVTRSGDNIVLNMPNEVTFGVDEVHLNPGAKNVLNSVALVAKEYDNTQINILGYTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + ++ L RA V +Y +++ + +R++ G+ P +NRR
Sbjct: 154 SSGSESYNLRLSKVRAVEVADYLISQKVEYARVRSEGIGEARPIASNSTAQGRTQNRRVE 213
Query: 151 VFLKGCR 157
+ L R
Sbjct: 214 IILSPLR 220
>gi|218259786|ref|ZP_03475375.1| hypothetical protein PRABACTJOHN_01034 [Parabacteroides johnsonii
DSM 18315]
gi|218224914|gb|EEC97564.1| hypothetical protein PRABACTJOHN_01034 [Parabacteroides johnsonii
DSM 18315]
Length = 227
Score = 77.2 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 53/130 (40%), Gaps = 2/130 (1%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFL 84
+T + + E + + F T+S ++ A L +L + D D
Sbjct: 82 EATLPEETTVETINNGEALKVTFDSGILFATNSSTVSAASKSALRDLAASLNANPDTDIK 141
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAY 143
I GH D G + + L +RA +VF+Y + +G+S+ RM G P +
Sbjct: 142 IIGHTDNTGKVDYNQTLSEKRAKSVFDYLMEDQGVSSKRMTYEGKGVHEPVADNSTPEGR 201
Query: 144 AKNRRAIVFL 153
A NRR + +
Sbjct: 202 ALNRRVEILI 211
>gi|126666899|ref|ZP_01737875.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Marinobacter sp. ELB17]
gi|126628615|gb|EAZ99236.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Marinobacter sp. ELB17]
Length = 232
Score = 77.2 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADELGSRNSSIA 100
++ S + ++ FD + SIR L ++ L++ D + IEGH D G + +
Sbjct: 116 DEISLVMPGNITFDLNQTSIRSQFAGTLESVALVLKEFDQTIIQIEGHTDSQGGDSYNQL 175
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RRA +V ++ + +GI + R + YG+ P +NRR + L R
Sbjct: 176 LSERRASSVRDFLLNQGIESRRTRAVGYGERYPVASNDTSGGREQNRRVELTLVPMR 232
>gi|167035658|ref|YP_001670889.1| OmpA/MotB domain-containing protein [Pseudomonas putida GB-1]
gi|166862146|gb|ABZ00554.1| OmpA/MotB domain protein [Pseudomonas putida GB-1]
Length = 163
Score = 77.2 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 49/141 (34%), Gaps = 6/141 (4%)
Query: 19 SGIDNLDTKISSPDTVLN-----ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
SG K +P+ + + E ++ + V F + S+ ++ +G
Sbjct: 20 SGCQTAPPKGLTPEQIAVLKREGFTPTDEGWAYDLSGKVLFGSDLDSLNGQSQSIVERIG 79
Query: 74 SWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
L ++GHAD G + L RRA +V V G+ ++ G
Sbjct: 80 KALLSVGIQGVRVDGHADASGKAAYNQQLSERRAQSVTKALVGVGMQPQNIQSRGLGSTQ 139
Query: 133 PSVYGHDEDAYAKNRRAIVFL 153
P +NRR + +
Sbjct: 140 PVADNRTSAGRTENRRVSIVV 160
>gi|186471751|ref|YP_001863069.1| DotU family type IV/VI secretion system protein [Burkholderia
phymatum STM815]
gi|184198060|gb|ACC76023.1| type IV / VI secretion system protein, DotU family [Burkholderia
phymatum STM815]
Length = 429
Score = 77.2 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 21/127 (16%), Positives = 46/127 (36%), Gaps = 4/127 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
++ + + + F ++ + +++ + + + K + G+ D
Sbjct: 301 AAGTVSVDEDAKHSAVTFRGDSMFPPGGVAVNTSMGPLIAKIAAEIVKVPGKVTVLGYTD 360
Query: 91 ELGSRNS----SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
L + + AL RA V A G+ ASR++ G+ P A+N
Sbjct: 361 NLPIHSHAFASNDALSAERATQVLQMLQADGVPASRLEAMGKGEADPVADNSTPQGRAQN 420
Query: 147 RRAIVFL 153
RR + +
Sbjct: 421 RRVEIHV 427
>gi|108763188|ref|YP_632960.1| OmpA domain-containing protein [Myxococcus xanthus DK 1622]
gi|108467068|gb|ABF92253.1| OmpA domain protein [Myxococcus xanthus DK 1622]
Length = 615
Score = 77.2 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 46/108 (42%), Gaps = 2/108 (1%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRR 105
V VFF+ + I+ ++L + + +H ++ H D+ G + + L R
Sbjct: 495 VMGKVFFEPTQARIQKRSYELLDWVARVIREHPEIPLVVVGAHTDDRGFPDDNRRLSQGR 554
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
A AV Y + R I+ R+K YG+E P + NRR L
Sbjct: 555 AEAVRQYLIGRDIAPERLKALGYGQERPIDSNATSNGRENNRRVEFLL 602
>gi|27804808|gb|AAO22853.1| outer membrane protein A-like protein [Myxococcus xanthus]
Length = 241
Score = 77.2 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 46/108 (42%), Gaps = 2/108 (1%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRR 105
V VFF+ + I+ ++L + + +H ++ H D+ G + + L R
Sbjct: 121 VMGKVFFEPTQARIQKRSYELLDWVARVIREHPEIPLVVVGAHTDDRGFPDDNRRLSQGR 180
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
A AV Y + R I+ R+K YG+E P + NRR L
Sbjct: 181 AEAVRQYLIGRDIAPERLKALGYGQERPIDSNATSNGRENNRRVEFLL 228
>gi|148549735|ref|YP_001269837.1| OmpA/MotB domain-containing protein [Pseudomonas putida F1]
gi|148513793|gb|ABQ80653.1| OmpA/MotB domain protein [Pseudomonas putida F1]
Length = 162
Score = 77.2 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 51/141 (36%), Gaps = 6/141 (4%)
Query: 19 SGIDNLDTKISSPDTVLN-----ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+G + K +P+ + + E ++ + V F + S+ ++ +G
Sbjct: 19 TGCQSAPPKGLTPEQIAVLKREGFTPTDEGWAYDLSGKVLFGSDLDSLNGQSQAIVERIG 78
Query: 74 SWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
L ++GHAD G + L RRA +V V G+ A ++ G
Sbjct: 79 KALLGVGIQGVRVDGHADSSGKAAYNQQLSERRAQSVTKALVGIGMQAQNIQSRGLGSSQ 138
Query: 133 PSVYGHDEDAYAKNRRAIVFL 153
P +NRR + +
Sbjct: 139 PVADNRTSAGRTENRRVSIVV 159
>gi|115523809|ref|YP_780720.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
BisA53]
gi|115517756|gb|ABJ05740.1| OmpA/MotB domain protein [Rhodopseudomonas palustris BisA53]
Length = 446
Score = 76.8 bits (187), Expect = 8e-13, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 43/125 (34%), Gaps = 3/125 (2%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADE 91
+ + + + + F S I + VL L ++ + GH D
Sbjct: 322 AAPAQVCQSKLAAVVAAEKITFQPRSAEISKESLPVLEKLGAILVQCPAVTIEVAGHTDG 381
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGIS--ASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
G + + AL RRA AV I ++++ YG P + A NRR
Sbjct: 382 GGKKAKNQALSERRAEAVVASLTKAKIGVGSAKLTAVGYGSAKPIASNDTPEGRANNRRI 441
Query: 150 IVFLK 154
+K
Sbjct: 442 EFVVK 446
>gi|115360943|ref|YP_778080.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD]
gi|115286271|gb|ABI91746.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
Length = 239
Score = 76.8 bits (187), Expect = 8e-13, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLR 104
S+ +F T S + A L L + ++H ++G+ D GS + AL R
Sbjct: 129 VSLTGDAYFATDSAVLTSAATAALDKLLNQQGDRHFARVDVDGYTDATGSAAHNQALSKR 188
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RA AV Y G+ A T +G+ P+ + A+NRR + L+
Sbjct: 189 RADAVAAYLREHGLKADAFAATGHGEANPAASNDTAEGRARNRRVEISLQ 238
>gi|189499949|ref|YP_001959419.1| OmpA/MotB domain-containing protein [Chlorobium phaeobacteroides
BS1]
gi|189495390|gb|ACE03938.1| OmpA/MotB domain protein [Chlorobium phaeobacteroides BS1]
Length = 229
Score = 76.8 bits (187), Expect = 8e-13, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 50/133 (37%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
D+ +I + + E + F T S ++ + L + + D
Sbjct: 80 DDQAKEIDNQVDGAQVERVGEGIRVVFDTGLLFSTGSSTLTSTSSYNIQKLANILNKYSD 139
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
D ++EGH D GS + L +RA +V + A +S SR+ YG+ P
Sbjct: 140 TDIVVEGHTDSQGSETYNQQLSEKRAESVSSLLRAYNVSKSRISTIGYGETRPVASNETA 199
Query: 141 DAYAKNRRAIVFL 153
NRR V +
Sbjct: 200 SGRKLNRRVEVLI 212
>gi|332528331|ref|ZP_08404331.1| OmpA/MotB [Hylemonella gracilis ATCC 19624]
gi|332042202|gb|EGI78528.1| OmpA/MotB [Hylemonella gracilis ATCC 19624]
Length = 186
Score = 76.8 bits (187), Expect = 8e-13, Method: Composition-based stats.
Identities = 44/181 (24%), Positives = 83/181 (45%), Gaps = 31/181 (17%)
Query: 2 QYSTIFIILSAITMMSISGID--------------------------NLDTKISSPDTVL 35
+ + I L ++T+ + S + ++ ++P+TV+
Sbjct: 3 KLKYLGIALFSLTLAACSSVKLDPQTGSDKASAGQTSATVADGGAVGSVPQPTATPETVV 62
Query: 36 ----NESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHAD 90
++ + + + G V+FD SY I+P +++ +L +IEGH D
Sbjct: 63 QSAGPTAASLQSAAMAAGRLVYFDYDSYVIKPEFQKLIEAQARYLSSDPALRVVIEGHTD 122
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
E G R ++ALG RRA AV G++ +++ S+G+E P G +E A+++NRRA
Sbjct: 123 ERGGREYNLALGQRRAEAVRRALSLLGVADTQIDAVSFGEEKPVSEGSNESAWSQNRRAE 182
Query: 151 V 151
+
Sbjct: 183 I 183
>gi|300719120|ref|YP_003743923.1| outer membrane protein [Erwinia billingiae Eb661]
gi|299064956|emb|CAX62076.1| Putative outer membrane protein [Erwinia billingiae Eb661]
Length = 220
Score = 76.8 bits (187), Expect = 8e-13, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 65/124 (52%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD+SS +++PA L+ + L+++ + G+ D
Sbjct: 94 GTGVSVTRQGDNIVLNMPNNVTFDSSSSTLKPAGANTLTGVAMVLKEYPKTAVNVAGYTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GSR ++ L +RA +V + + +G++A+R++ + G + P + A+NRR
Sbjct: 154 STGSRQLNMTLSQQRADSVGSALITQGVAANRVRTSGMGPDNPVASNSTAEGKAQNRRVE 213
Query: 151 VFLK 154
+ L
Sbjct: 214 ITLS 217
>gi|303239756|ref|ZP_07326280.1| OmpA/MotB domain protein [Acetivibrio cellulolyticus CD2]
gi|302592693|gb|EFL62417.1| OmpA/MotB domain protein [Acetivibrio cellulolyticus CD2]
Length = 277
Score = 76.8 bits (187), Expect = 8e-13, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 5/117 (4%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNS---- 97
E S+ D V F+T I+ +L L ++ + + GH D + N
Sbjct: 133 EGLEISIQDVVLFNTGEADIKKEVYPLLLKLTGIIKGLNNSIKVVGHTDNVPIHNDKFRS 192
Query: 98 SIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA V ++ +G + + + G+ P E+ AKNRR +++
Sbjct: 193 NWDLSSFRAINVMSFMRDQGKLRPEKFSIQACGEFKPKYDNSTEEGRAKNRRVEIYI 249
>gi|158424220|ref|YP_001525512.1| OmpA family protein [Azorhizobium caulinodans ORS 571]
gi|158331109|dbj|BAF88594.1| OmpA family protein [Azorhizobium caulinodans ORS 571]
Length = 494
Score = 76.8 bits (187), Expect = 8e-13, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 4/105 (3%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG----SRNSSIALGLRRAYA 108
F ++S ++RP +V++ + + L K + G+ D + + ++AL RA A
Sbjct: 387 LFASASTTLRPPYPEVIAKVAAALAKFKGPVNVLGYTDNVPIRTATFPDNLALSTARARA 446
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V A +R+ G P D KNRR + L
Sbjct: 447 VGQALAAGLGGNARITTVGKGDADPVASNDTPDGRQKNRRVEIVL 491
>gi|147678453|ref|YP_001212668.1| flagellar motor protein [Pelotomaculum thermopropionicum SI]
gi|146274550|dbj|BAF60299.1| flagellar motor protein [Pelotomaculum thermopropionicum SI]
Length = 255
Score = 76.8 bits (187), Expect = 8e-13, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 44/125 (35%), Gaps = 5/125 (4%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RN 96
+ S D F S + P + + +G L K +EGH D L
Sbjct: 123 ERGLVLSFLDVALFPLGSARLTPEAQETVGKIGKILLKAPNYIRVEGHTDNLPINTREFP 182
Query: 97 SSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
S+ L + RA +V R+ T YG+ P + + +NRR + +
Sbjct: 183 SNWELSVARATSVVQELIHKLNFPPERLSATGYGEFRPRMPNDSAEHRQQNRRVDLVILR 242
Query: 156 CRANT 160
+ T
Sbjct: 243 SKYET 247
>gi|71064914|ref|YP_263641.1| outer membrane protein [Psychrobacter arcticus 273-4]
gi|71037899|gb|AAZ18207.1| probable outer membrane protein [Psychrobacter arcticus 273-4]
Length = 394
Score = 76.8 bits (187), Expect = 8e-13, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 57/147 (38%), Gaps = 8/147 (5%)
Query: 22 DNLDTKISSPDTVLNES-----SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
D++D +P V+ ++ + + VFFD +I+ ++ + +
Sbjct: 238 DSIDACPGTPMNVVVDARGCPVPVDITDELKMELRVFFDNDKSAIKTQYKPEIAKVAEKM 297
Query: 77 EKHD-CDFLIEGHADEL-GSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMP 133
++ +EGHA + S + L RA AV + +R+ YG + P
Sbjct: 298 REYPNSTARVEGHASKTGPSARYNQRLSEARAVAVKSMLTNEFGIAPNRLSTVGYGYDQP 357
Query: 134 SVYGHDEDAYAKNRRAIVFLKGCRANT 160
+ E+ A NRR + G + T
Sbjct: 358 IADNNTEEGRAMNRRVYAIITGDKTMT 384
>gi|255305283|ref|ZP_05349455.1| chemotaxis protein [Clostridium difficile ATCC 43255]
Length = 231
Score = 76.8 bits (187), Expect = 8e-13, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 47/127 (37%), Gaps = 5/127 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ + DS+ FD+ ++ L+ + ++ +IEGH D
Sbjct: 102 QNSVTVKDDSRGILLELDDSILFDSGISELKADSKATLNKVYDMIKMIKNKIVIEGHTDN 161
Query: 92 LG----SRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ + S+ L RA +V YF +G+ T G+ P V A+N
Sbjct: 162 VPVKSSTHESNWDLSSSRAVSVVRYFVEEKGMDPKLFSATGCGEYQPLVSNETAKGRAEN 221
Query: 147 RRAIVFL 153
RR + +
Sbjct: 222 RRVNILI 228
>gi|315225274|ref|ZP_07867091.1| OmpA domain protein [Capnocytophaga ochracea F0287]
gi|314944957|gb|EFS96989.1| OmpA domain protein [Capnocytophaga ochracea F0287]
Length = 360
Score = 76.8 bits (187), Expect = 8e-13, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 56/135 (41%), Gaps = 1/135 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-WLEK 78
+ T++ + + + + + ++ FDT ++P +L N+ E
Sbjct: 221 SANKAITRVETAEEREARTQRVVKQINLYAKTILFDTDKSVVKPQAEFILDNIAIIMNEN 280
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
D +F++EGH D G+ ++ L RA A+ Y G+S R+ YG+ P
Sbjct: 281 PDFNFVVEGHTDNTGTPEHNLKLSQDRADAIKQYLSRHGVSKKRLDAKGYGQTRPIESNE 340
Query: 139 DEDAYAKNRRAIVFL 153
E NRR + +
Sbjct: 341 TERGKEINRRVEINV 355
>gi|21223388|ref|NP_629167.1| secreted protein [Streptomyces coelicolor A3(2)]
gi|8218177|emb|CAB92608.1| putative secreted protein [Streptomyces coelicolor A3(2)]
Length = 203
Score = 76.8 bits (187), Expect = 9e-13, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 48/140 (34%), Gaps = 2/140 (1%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
++ + + ++ + + + ++ V F S + + +
Sbjct: 57 ATLAQAKVLDIKSVVEEQSGDERREDTNTSVTLALQAEVLFGKDSSKLGAEAKSRIRGIA 116
Query: 74 SWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKE 131
+ + + G D+LGS L RRA AV + + + +V YG++
Sbjct: 117 DEIRTQNATRVRVFGFTDDLGSSAHGDVLSKRRANAVHDVLSQSLNDAGITYEVRGYGEQ 176
Query: 132 MPSVYGHDEDAYAKNRRAIV 151
P E KNRR V
Sbjct: 177 YPIADNSTEAGRKKNRRVEV 196
>gi|189346279|ref|YP_001942808.1| peptidoglycan-associated lipoprotein [Chlorobium limicola DSM 245]
gi|189340426|gb|ACD89829.1| peptidoglycan-associated lipoprotein [Chlorobium limicola DSM 245]
Length = 153
Score = 76.8 bits (187), Expect = 9e-13, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 67/146 (45%), Gaps = 8/146 (5%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQ 67
+ + + + + S +GD +FFD +R ++
Sbjct: 11 LFIPGMLFLGACCCEK------DVIVAPEPPPPPPPPSVELGD-IFFDYDKSELRAEAVE 63
Query: 68 VLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT 126
L W++++ ++EGH DE G+ ++ALG RRA A +Y V G +RM+
Sbjct: 64 QLQKNFDWMKQNPAGTLIVEGHCDERGTNEYNMALGERRANAAKDYMVNVGADPARMQTV 123
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVF 152
SYG+E P GHDE ++A+NRRA
Sbjct: 124 SYGEERPFALGHDEASWAQNRRAHFV 149
>gi|260769389|ref|ZP_05878322.1| outer membrane protein A precursor [Vibrio furnissii CIP 102972]
gi|260614727|gb|EEX39913.1| outer membrane protein A precursor [Vibrio furnissii CIP 102972]
Length = 316
Score = 76.8 bits (187), Expect = 9e-13, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 39/102 (38%), Gaps = 1/102 (0%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
S S+ Q LS L ++ LI GH D GS + L RRA A +
Sbjct: 211 ALSFDSSSLNATQQQALSTLAEKLNQQPQAQVLIIGHTDSTGSDAYNTKLSTRRAQAAAD 270
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ ++ R+KV G+ P A NRR V +
Sbjct: 271 VLMENQVAEHRIKVFGEGQTRPIDTNTTPAGRAHNRRVEVQI 312
>gi|59711570|ref|YP_204346.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
fischeri ES114]
gi|197335447|ref|YP_002155724.1| peptidoglycan-associated lipoprotein [Vibrio fischeri MJ11]
gi|59479671|gb|AAW85458.1| peptidoglycan-associated outer membrane lipoprotein [Vibrio
fischeri ES114]
gi|197316937|gb|ACH66384.1| peptidoglycan-associated lipoprotein [Vibrio fischeri MJ11]
Length = 188
Score = 76.8 bits (187), Expect = 9e-13, Method: Composition-based stats.
Identities = 47/181 (25%), Positives = 75/181 (41%), Gaps = 31/181 (17%)
Query: 3 YSTIFIILSAITMMSIS----------------------------GIDNLDTKISSPDTV 34
++ I L + + + S D D
Sbjct: 7 LKSLLIALPVVALSACSSSDSATDSTAGQESTNAAETQTTNGAEGQTDTAVLSSIEADEA 66
Query: 35 LNESSLQEQFSSSVG--DSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADE 91
+NE+ ++ Q + +V+F + +I +L+ + +EGHADE
Sbjct: 67 MNEAEVRAQAEQELRKVQTVYFAFDNSTISSEYEDMLAAHAAFLSADPSIKVTVEGHADE 126
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
G+ +IALG RRA AV Y A G+SA ++ + SYG+E P V G + YAKNRRA++
Sbjct: 127 RGTPEYNIALGERRAKAVSKYLQALGVSADQISIVSYGEEKPLVLGQTAEDYAKNRRAVL 186
Query: 152 F 152
Sbjct: 187 V 187
>gi|319943001|ref|ZP_08017284.1| peptidoglycan-associated lipoprotein [Lautropia mirabilis ATCC
51599]
gi|319743543|gb|EFV95947.1| peptidoglycan-associated lipoprotein [Lautropia mirabilis ATCC
51599]
Length = 189
Score = 76.8 bits (187), Expect = 9e-13, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 64/128 (50%), Gaps = 2/128 (1%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-F 83
D P + LQ+ S VFF+ S++I P ++ ++L H
Sbjct: 60 DITPVQPQDEATDP-LQDPNSPLAKREVFFEFDSFAILPEYQPIIEAHANYLSAHRDKHI 118
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
++EG+ DE GSR ++ALG +RA AV G+ ++M+ SYG+E P G DE +
Sbjct: 119 VLEGNTDEFGSREYNLALGQKRADAVRRALSTLGVDENQMESISYGEEKPRASGTDESSR 178
Query: 144 AKNRRAIV 151
++NRR +
Sbjct: 179 SQNRRVDI 186
>gi|300718501|ref|YP_003743304.1| OmpA family protein [Erwinia billingiae Eb661]
gi|299064337|emb|CAX61457.1| OmpA family protein [Erwinia billingiae Eb661]
Length = 500
Score = 76.8 bits (187), Expect = 9e-13, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 52/141 (36%), Gaps = 2/141 (1%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+ I+ +++ S + + V D+ FDT S + ++ + L
Sbjct: 83 ALAKIAAEEHIVISSSPLQAQESGGKKDVGIVAQVEDNGMFDTDSAQLSVDGLRQVRKLA 142
Query: 74 SWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
+ +++ D LI GH D G+ + + L RA +V G++ R+ G
Sbjct: 143 AVMKQDDQQGVVLIVGHTDATGNASWNQKLSESRAQSVGRVLQQAGLNPQRLYFQGAGSS 202
Query: 132 MPSVYGHDEDAYAKNRRAIVF 152
P + NRR +
Sbjct: 203 RPIADNATLAGRSANRRVEIV 223
>gi|238023638|ref|YP_002907870.1| hypothetical protein bglu_2g01470 [Burkholderia glumae BGR1]
gi|237878303|gb|ACR30635.1| OmpA/MotB [Burkholderia glumae BGR1]
Length = 438
Score = 76.8 bits (187), Expect = 9e-13, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 37/125 (29%), Gaps = 4/125 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
L F T +RP VL+ + + + ++ G+ D
Sbjct: 312 GELTVDEDARHSKVVFRGDTMFVTGKSRVRPELEPVLAKVAREVARVGGRVIVTGYTDSQ 371
Query: 93 GSRNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
L +RA V + A G + R+ G P ++NRR
Sbjct: 372 PIHTREFPDNLVLSQKRAAFVADVLKAHGTPSERIVSIGKGDAQPVADNATPQGRSRNRR 431
Query: 149 AIVFL 153
V +
Sbjct: 432 VEVLV 436
>gi|192362185|ref|YP_001983947.1| OmpA domain-containing protein [Cellvibrio japonicus Ueda107]
gi|190688350|gb|ACE86028.1| OmpA domain protein [Cellvibrio japonicus Ueda107]
Length = 349
Score = 76.8 bits (187), Expect = 9e-13, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 55/139 (39%), Gaps = 4/139 (2%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
D +S + + + + + + FDT+ ++P + + L L ++
Sbjct: 204 SKDKCPNTVSGLKVDADGCPVVLEKTLVINLEILFDTAKSEVKPQYLPQVKKLADALTQY 263
Query: 80 DCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYG 137
+ +EGH D GS + L +RA AV V + A R+ YG E P
Sbjct: 264 ENTVVTVEGHTDSQGSAAFNKRLSQQRADAVKAALVEKFGIAADRVTAVGYGLERPIANN 323
Query: 138 HDEDAYAKNRRA--IVFLK 154
+ A+NRR V +K
Sbjct: 324 ATAEGRAQNRRVVGEVSVK 342
>gi|163802040|ref|ZP_02195936.1| quinolinate synthetase [Vibrio sp. AND4]
gi|159174181|gb|EDP58989.1| quinolinate synthetase [Vibrio sp. AND4]
Length = 175
Score = 76.8 bits (187), Expect = 9e-13, Method: Composition-based stats.
Identities = 52/175 (29%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 1 MQYST----IFIILSAITMMSISGIDNLDT------------------KISSPDTVLNES 38
MQ + + I + + M + S D+ + ++ L E
Sbjct: 1 MQLNKVLKGLLIAIPVMAMTACSSSDDAASNAGAETNMNTGVSETTVVTPIDQNSQLAEQ 60
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNS 97
L+EQ + +++F + +I ++L+ S+ + + IEGHADE G+
Sbjct: 61 ELKEQ-ALRETQTIYFAFDNSTIAGDYEEMLAAHASYLSKNPGLNVTIEGHADERGTPEY 119
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+IALG RRA AV NY A G+ A ++ + SYG+E P + G ED YAKNRRA++
Sbjct: 120 NIALGERRAEAVSNYLQALGVQADQVSIVSYGEEKPLLLGQSEDVYAKNRRAVLV 174
>gi|149278789|ref|ZP_01884924.1| OmpA/MotB:Rickettsia 17 kDa surface antigen [Pedobacter sp. BAL39]
gi|149230408|gb|EDM35792.1| OmpA/MotB:Rickettsia 17 kDa surface antigen [Pedobacter sp. BAL39]
Length = 175
Score = 76.8 bits (187), Expect = 9e-13, Method: Composition-based stats.
Identities = 33/156 (21%), Positives = 62/156 (39%), Gaps = 18/156 (11%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDS----------------VFFDTSSY 59
+ + P T + + ++ D+ V F T+S
Sbjct: 16 TVACKTQKIAKSTTPPATEVAADQELDNLKKNLPDNQIARTNEGIKFTFSSEVLFPTNSS 75
Query: 60 SIRPADIQVLSNLGSWL--EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG 117
+ A + L+ + + +K LIEGH+D+ G+ + L +RA +V Y V+ G
Sbjct: 76 ILNEASKKKLAEVAKVISEQKPAPAVLIEGHSDKTGTAPYNQWLSEKRAVSVKTYLVSLG 135
Query: 118 ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
I+AS+++ G P ++ +NRR + L
Sbjct: 136 IAASKIRTAGQGDTKPVGDNKTKEGRLQNRRVEITL 171
>gi|325121508|gb|ADY81031.1| hypothetical protein BDGL_000445 [Acinetobacter calcoaceticus
PHEA-2]
Length = 475
Score = 76.8 bits (187), Expect = 9e-13, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 59/148 (39%), Gaps = 6/148 (4%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSV-----GDSVFFDTSSYSIRPADI 66
++ + ++ +++ T L +++ + F + S I +
Sbjct: 326 VVSTAPETAEQSVSNSLTASQTALGSIDPNNVDVNALVKALNLQIINFASGSSDIPADNK 385
Query: 67 QVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
+L + + + + GH D G+ ++ AL RRA AV +Y ++G+ S++
Sbjct: 386 AILDQAATLLNKVNGVKLNVGGHTDSTGNAAANKALSQRRAQAVVDYLTSKGVEGSKLVA 445
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+G + P E+ KNRR +
Sbjct: 446 QGHGSDQPVAENTTEEGRFKNRRIEFSV 473
>gi|315181920|gb|ADT88833.1| outer membrane protein OmpA [Vibrio furnissii NCTC 11218]
Length = 316
Score = 76.8 bits (187), Expect = 9e-13, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 46/133 (34%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
D ++T + ++ S S+ Q L L + ++
Sbjct: 180 DAVETTSFIAPAAPQTTPPVSSEKTTTYTYDALSFDSSSLNATQQQALRTLAATLNKQPQ 239
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
LI GH D GS + L RRA A + + ++ R+KV G+ P
Sbjct: 240 AQILIIGHTDSTGSDAYNTKLSTRRAQAAADVLMENQVAEHRIKVFGEGQTRPIDTNTTP 299
Query: 141 DAYAKNRRAIVFL 153
A NRR V +
Sbjct: 300 AGRAHNRRVEVQI 312
>gi|298506340|gb|ADI85063.1| peptidoglycan-associated lipoprotein [Geobacter sulfurreducens
KN400]
Length = 187
Score = 76.8 bits (187), Expect = 9e-13, Method: Composition-based stats.
Identities = 45/153 (29%), Positives = 71/153 (46%), Gaps = 9/153 (5%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD--------SVFFDTSSYS 60
++SA + + L + + + E + G+ V+FD ++
Sbjct: 32 VVSAPAQLPATETVALPATTIDAHESIAATDIAEDRITPAGNATQASPLKIVYFDFDAWV 91
Query: 61 IRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
+ A ++L+ W + ++EGH DE GS ++ALG +RA + Y GI
Sbjct: 92 LNGAAREILAGNAEWLRKNPGVAVILEGHTDERGSDAYNLALGEQRAKSAMKYLQTLGID 151
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
A RM V SYG+E P+V GHDE A+A NRR
Sbjct: 152 AGRMTVVSYGEEKPAVEGHDESAWAGNRRVEFI 184
>gi|187251342|ref|YP_001875824.1| outer membrane protein [Elusimicrobium minutum Pei191]
gi|186971502|gb|ACC98487.1| Outer membrane protein [Elusimicrobium minutum Pei191]
Length = 217
Score = 76.8 bits (187), Expect = 9e-13, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 50/128 (39%), Gaps = 1/128 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHA 89
E + + + + F T S + I ++ + +K+ + ++ EGH
Sbjct: 81 AAIATVERNADGSIRVIMKNDILFATGSAELSSQAINDIAAMSKVFKKYPYNIIVVEGHT 140
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GS + + L RA AV+N +A + + YG P A+NRR
Sbjct: 141 DSTGSASFNQTLSENRARAVYNQLIANNVKTYSIGYRGYGASNPIASNDTAAGRAQNRRV 200
Query: 150 IVFLKGCR 157
+ +K +
Sbjct: 201 TLNIKADK 208
>gi|124022953|ref|YP_001017260.1| hypothetical protein P9303_12471 [Prochlorococcus marinus str. MIT
9303]
gi|123963239|gb|ABM77995.1| Hypothetical protein P9303_12471 [Prochlorococcus marinus str. MIT
9303]
Length = 252
Score = 76.8 bits (187), Expect = 9e-13, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 53/122 (43%), Gaps = 8/122 (6%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSI 99
+ + + V FD +++P+ + L + + + D +EGH D GS +
Sbjct: 128 ENEVLIELAADVLFDFDKANLKPSAVASLETVAKRIRETSQGDVRVEGHTDSKGSNEYNQ 187
Query: 100 ALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDA------YAKNRRAIVF 152
L +RA +V ++FV+ G ++ + +G+ P V E +NRR +
Sbjct: 188 TLSEKRAISVRDWFVSDGGLSNVQFVTKGFGELKPVVSNTTEKGGDNPIGRQRNRRVEII 247
Query: 153 LK 154
+K
Sbjct: 248 IK 249
>gi|73539085|ref|YP_299452.1| OmpA/MotB [Ralstonia eutropha JMP134]
gi|72122422|gb|AAZ64608.1| OmpA/MotB [Ralstonia eutropha JMP134]
Length = 575
Score = 76.8 bits (187), Expect = 9e-13, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 44/119 (36%), Gaps = 2/119 (1%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSR 95
+ + + F + S + P +VL L D L+ GH D +G+
Sbjct: 431 QPPAPPPSTIELNSLSLFKSGSAVLNPGSNRVLIGALELIKAHPDKRVLVAGHTDAVGAA 490
Query: 96 NSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S++ L RA +V ++ +R + YG P E + NRR + L
Sbjct: 491 QSNLKLSEARAASVRDWLADAAGLPVTRFAIQGYGDTRPKAPNDTEAGRSANRRVEITL 549
>gi|319788654|ref|YP_004148129.1| OmpA/MotB domain protein [Pseudoxanthomonas suwonensis 11-1]
gi|317467166|gb|ADV28898.1| OmpA/MotB domain protein [Pseudoxanthomonas suwonensis 11-1]
Length = 348
Score = 76.8 bits (187), Expect = 9e-13, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 1/106 (0%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
V V F T I P + + + + +EGH D+ G ++ L R+
Sbjct: 241 VALQVNFATDRTEILPESQPQIDQVVELLQQDPQLNLGVEGHTDDTGDAGHNLRLSEGRS 300
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
AV VARGI A+R+ +G P E+ A+NRR +
Sbjct: 301 NAVVKALVARGIDAARLTSAGFGSTRPVADNGSEEGKARNRRVELV 346
>gi|304408922|ref|ZP_07390543.1| type IV / VI secretion system protein, DotU family [Shewanella
baltica OS183]
gi|307302925|ref|ZP_07582680.1| type IV / VI secretion system protein, DotU family [Shewanella
baltica BA175]
gi|304352743|gb|EFM17140.1| type IV / VI secretion system protein, DotU family [Shewanella
baltica OS183]
gi|306913285|gb|EFN43707.1| type IV / VI secretion system protein, DotU family [Shewanella
baltica BA175]
Length = 436
Score = 76.8 bits (187), Expect = 9e-13, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 41/117 (35%), Gaps = 4/117 (3%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS---- 94
L ++ VG F T I V+ + LE L+ G+ D+
Sbjct: 316 ELPDRVRIRVGLHHLFTTGGTDINEGFQPVIVKIARALEGTKGRILVNGYTDDQPIFTSR 375
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
S+ L L RA A+ + A R++ G+ P + A NRR +
Sbjct: 376 YPSNWHLSLARANAMADSLAAGADLHGRLQPEGRGEAEPVAPNDTPENRALNRRVEI 432
>gi|238026069|ref|YP_002910300.1| OmpA/MotB [Burkholderia glumae BGR1]
gi|237875263|gb|ACR27596.1| OmpA/MotB [Burkholderia glumae BGR1]
Length = 355
Score = 76.8 bits (187), Expect = 9e-13, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAY 107
++ F+T S ++ P +L + + + + I GH D G+R S+IAL RA
Sbjct: 248 NRTIEFETGSATLTPQGRAILDQMAAAMSRMANRSVAIIGHTDNSGNRASNIALSQARAD 307
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
AV Y VA+GI + ++ T G + P + A+NRR
Sbjct: 308 AVKGYLVAKGIPSQQLSTTGVGPDQPIASNDTAEGRARNRRIEF 351
>gi|225871803|ref|YP_002753257.1| chemotaxis protein MotB [Acidobacterium capsulatum ATCC 51196]
gi|225791684|gb|ACO31774.1| chemotaxis protein MotB [Acidobacterium capsulatum ATCC 51196]
Length = 262
Score = 76.8 bits (187), Expect = 9e-13, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 45/118 (38%), Gaps = 5/118 (4%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR----N 96
+ S+ ++ F+D+ S + +P+ + + + L + IEGH D + +
Sbjct: 114 PDGLVISLREAGFYDSGSATPKPSSMGAVGIIAHELYQVPYALRIEGHTDNVPIHTAKFD 173
Query: 97 SSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA + + R+ Y + P A+NRR + +
Sbjct: 174 SNWELSTARATTMARLLIENFGVAPQRLSAAGYAQYHPIASNATAAGRAENRRVDIIV 231
>gi|24376330|ref|NP_720438.1| outer membrane protein A [Shewanella oneidensis MR-1]
gi|24345232|gb|AAN53038.1| outer membrane protein OmpA [Shewanella oneidensis MR-1]
Length = 342
Score = 76.8 bits (187), Expect = 9e-13, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 56/138 (40%), Gaps = 1/138 (0%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
++ + + + P V Q +S G+S+ F +S + Q +
Sbjct: 196 VTAPTPEVVTQVVELPPVVQIVEKRQFVYSEQKGNSLLFAHNSSVLNNTS-QFADVVSFL 254
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+ +I GH D GS + L RRA +V NY V++G+ ++++ G+
Sbjct: 255 KQHPTASAVITGHTDSTGSDKYNQWLSERRAISVANYLVSQGVQSAQLTSVGKGETASVA 314
Query: 136 YGHDEDAYAKNRRAIVFL 153
E+ A NRR + +
Sbjct: 315 DNTTENGRAMNRRVEITI 332
>gi|310780073|ref|YP_003968405.1| OmpA/MotB domain protein [Ilyobacter polytropus DSM 2926]
gi|309749396|gb|ADO84057.1| OmpA/MotB domain protein [Ilyobacter polytropus DSM 2926]
Length = 216
Score = 76.8 bits (187), Expect = 9e-13, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 48/120 (40%), Gaps = 1/120 (0%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNS 97
+ + ++ F T S I VL ++ + +E D + GH D GS +
Sbjct: 97 TADNTLELVMPGNLTFRTGSSDINSGFYDVLDSVATILVEYKDTTIFVSGHTDNTGSLAT 156
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
+ L RA +V Y +RG+ +SR+ + + P +NRR + + G
Sbjct: 157 NQRLSQERANSVGRYLSSRGVLSSRISSQGFDYQFPIASNSTASGREQNRRVEIEITGTN 216
>gi|255318428|ref|ZP_05359661.1| OmpA/MotB domain protein [Acinetobacter radioresistens SK82]
gi|262378658|ref|ZP_06071815.1| outer membrane protein [Acinetobacter radioresistens SH164]
gi|255304420|gb|EET83604.1| OmpA/MotB domain protein [Acinetobacter radioresistens SK82]
gi|262299943|gb|EEY87855.1| outer membrane protein [Acinetobacter radioresistens SH164]
Length = 253
Score = 76.8 bits (187), Expect = 9e-13, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 40/106 (37%), Gaps = 1/106 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
V F++ S + A Q+L + + I GH D G N + L RA
Sbjct: 147 NRIVEFESGSAVLTAAGRQILEEMAVALHKVGGKKVKIIGHTDSSGDGNKNFLLSQERAM 206
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV NY +A+ I A + G P + KNRR +
Sbjct: 207 AVCNYLIAKNIKAENLSTEGMGSSKPVADNTTAEGRKKNRRIEFEV 252
>gi|282600293|ref|ZP_05973733.2| membrane protein OmpA-family [Providencia rustigianii DSM 4541]
gi|282565742|gb|EFB71277.1| membrane protein OmpA-family [Providencia rustigianii DSM 4541]
Length = 586
Score = 76.8 bits (187), Expect = 9e-13, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 54/129 (41%), Gaps = 3/129 (2%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLI 85
+ P + N L + ++ FD Y+++ +VL + L + K ++
Sbjct: 430 APTQPKIIPNAPVLAPEM-VTLDSLSLFDVGQYTLKTDATKVLVDALLNIKAKSGWLIVV 488
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
G+ D G+ + L L+RA +V ++ IS + V YG+ P + A
Sbjct: 489 SGYTDSTGNPELNQKLSLKRAESVRDWMIQTSDISPTCFAVQGYGQNNPVASNETSEGRA 548
Query: 145 KNRRAIVFL 153
+NRR + L
Sbjct: 549 QNRRVEIRL 557
>gi|153931184|ref|YP_001384895.1| chemotaxis motB protein [Clostridium botulinum A str. ATCC 19397]
gi|152927228|gb|ABS32728.1| chemotaxis protein MotB [Clostridium botulinum A str. ATCC 19397]
Length = 420
Score = 76.8 bits (187), Expect = 9e-13, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 49/126 (38%), Gaps = 5/126 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ + + D+V F+ I+P Q++ + + + +IEGH D +
Sbjct: 112 SSVEVKEDGRGIIIQLRDNVLFEIGRADIKPQSKQIMDKINGLIATLPNEVIIEGHTDNV 171
Query: 93 GS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
S+ L RA V YFV + + R YG+ P + + AKNR
Sbjct: 172 PIKNEVYGSNWELSTARAVNVLRYFVETKKQNPVRFTAAGYGEYRPIAQNNSDANRAKNR 231
Query: 148 RAIVFL 153
R + +
Sbjct: 232 RVNIVI 237
>gi|149919675|ref|ZP_01908153.1| putative chemotaxis MotB protein [Plesiocystis pacifica SIR-1]
gi|149819446|gb|EDM78876.1| putative chemotaxis MotB protein [Plesiocystis pacifica SIR-1]
Length = 262
Score = 76.8 bits (187), Expect = 9e-13, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 46/117 (39%), Gaps = 4/117 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ + + FD+ ++ L+ L + L + D+++ GH D + S+
Sbjct: 134 LVVKLDEGILFDSGRAKLKKEGQAALTELIAPLRDVNRDWIVAGHTDNVPIKTAKFQSNW 193
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
L RA V + + G+ A R+ Y + P + A+NRR + L
Sbjct: 194 ELSSARAVEVVTFLIDTGMPAERIGSAGYAEFDPVADNSSPEGRAQNRRIEIVLMPT 250
>gi|325923680|ref|ZP_08185304.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Xanthomonas gardneri ATCC 19865]
gi|325545846|gb|EGD17076.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Xanthomonas gardneri ATCC 19865]
Length = 407
Score = 76.8 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 54/139 (38%), Gaps = 8/139 (5%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDF 83
D +S S V FD + ++RP +LS L+++
Sbjct: 269 DKCPASQPGQTIGPDGCPVPVSIDLKGVNFDFNKSTLRPDAQSILSEATEILKRYPDLKV 328
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYG----- 137
+ GH D G+ + L RRA V++Y G+ ASR+ YG+ P
Sbjct: 329 EVAGHTDSKGTDAYNQKLSERRATTVYDYLTKNGVDASRLVGPIGYGESRPIAPNANPDG 388
Query: 138 -HDEDAYAKNRRAIVFLKG 155
+ + AKNRR + ++
Sbjct: 389 SDNPEGRAKNRRTELNVQN 407
>gi|260549981|ref|ZP_05824196.1| OmpA family protein [Acinetobacter sp. RUH2624]
gi|260406973|gb|EEX00451.1| OmpA family protein [Acinetobacter sp. RUH2624]
Length = 472
Score = 76.8 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 60/148 (40%), Gaps = 6/148 (4%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSV-----GDSVFFDTSSYSIRPADI 66
++ + ++ +++ T L +++ + F + S I +
Sbjct: 323 VVSAAPQTAEQSVSNSLTASQTALGSIDPNNVDVNALVKALNLQIINFASGSSEIPADNK 382
Query: 67 QVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
+L + + + GH D G+ ++ AL RRA AV +Y V++G+ AS++
Sbjct: 383 AILDQAATLLNKVTSVKLNVGGHTDSTGNAAANKALSQRRAQAVVDYLVSKGVDASKLVA 442
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+G E P E+ KNRR +
Sbjct: 443 QGHGSENPVAENTTEEGRFKNRRIEFSV 470
>gi|160898836|ref|YP_001564418.1| peptidoglycan-associated lipoprotein [Delftia acidovorans SPH-1]
gi|160364420|gb|ABX36033.1| peptidoglycan-associated lipoprotein [Delftia acidovorans SPH-1]
Length = 180
Score = 76.8 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 49/173 (28%), Positives = 71/173 (41%), Gaps = 25/173 (14%)
Query: 4 STIFIILSAITMMSISG----------IDNLDTKISSPDTVLNESSLQEQFS-------- 45
+ + L+ +M+ D T S+ Q S
Sbjct: 5 KRLSLALAVTALMAGCSSGVKLDETPVTDAGATSTGQGSGAGTGSTSQSGISGVDLTGSA 64
Query: 46 ------SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSS 98
V V+FD SY ++ + +L+ IEGH DE G R +
Sbjct: 65 ADKAGPQGVSRVVYFDFDSYVVKADAQPQIEAHARFLKASSARKVQIEGHTDERGGREYN 124
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ALG +RA AV G+S ++M+ SYGKE P+ GH EDAYA+NRRA +
Sbjct: 125 LALGQKRAEAVRRSLGLLGVSDAQMEAVSYGKEKPAAEGHSEDAYAQNRRAEL 177
>gi|331011090|gb|EGH91146.1| flagellar motor protein MotD [Pseudomonas syringae pv. tabaci ATCC
11528]
Length = 295
Score = 76.8 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 18/127 (14%), Positives = 44/127 (34%), Gaps = 4/127 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ + + S+ F + ++ + +++ D +EG D+
Sbjct: 118 SDQMTVRGNELWIEIELNSSLLFVSGDAIPSDKAFTIIEKVSGIVKRFDNPIHVEGFTDD 177
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
++ L R+ ++ G++ +R+ YG+ P AKNR
Sbjct: 178 QPISTAQFPTNWELSSARSASIVRMLAMDGVNPARLASVGYGEFQPIAPNTTAAGRAKNR 237
Query: 148 RAIVFLK 154
R ++ +
Sbjct: 238 RVVLVIS 244
>gi|261493427|ref|ZP_05989952.1| peptidoglycan-associated outer membrane lipoprotein [Mannheimia
haemolytica serotype A2 str. BOVINE]
gi|261310921|gb|EEY12099.1| peptidoglycan-associated outer membrane lipoprotein [Mannheimia
haemolytica serotype A2 str. BOVINE]
Length = 153
Score = 76.8 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 47/153 (30%), Positives = 74/153 (48%), Gaps = 4/153 (2%)
Query: 1 MQY--STIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSS 58
M+ + + + A + + S + ++ + L + + ++V+F S
Sbjct: 1 MKKFAKVLMVAVPAFALAACSSSSDDAAANAAANAAGEFGGLTAEQLKAQYNTVYFGFDS 60
Query: 59 YSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI 118
Y++ Q+L L K + I GHADE G+ +IALG RRA AV Y A+
Sbjct: 61 YAVEGEYRQLLDAHAQLLAKTQGNVTIAGHADERGTPEYNIALGQRRADAVKGYLAAK-- 118
Query: 119 SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
A+ SYG+E P+V GH E YAKNRRA++
Sbjct: 119 GANNTSTVSYGEEKPAVLGHSEADYAKNRRAVL 151
>gi|260551454|ref|ZP_05825638.1| peptidoglycan-associated lipoprotein [Acinetobacter sp. RUH2624]
gi|260405448|gb|EEW98941.1| peptidoglycan-associated lipoprotein [Acinetobacter sp. RUH2624]
Length = 191
Score = 76.8 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/178 (23%), Positives = 75/178 (42%), Gaps = 27/178 (15%)
Query: 1 MQYSTIFIILSAITM-MSISGIDNLDTKISSPDTVLNESS-------------------- 39
M S ++ +++ + ++G + ++ N S+
Sbjct: 4 MMKSIKYLAFPLLSVALVMTGCASRKPATTANAGTTNPSTVNTTGLSEDAALNAQNLAGA 63
Query: 40 -----LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELG 93
+ ++ V FD S + D Q L + + + + GH DE G
Sbjct: 64 SSKGVTEANKAALAKRVVHFDYDSSDLSAEDYQTLQAHAQFLMANANSKVALTGHTDERG 123
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+R ++ALG RRA AV +Y + G++ +++ SYGKE P GHDE A+ +NRR +
Sbjct: 124 TREYNMALGERRAKAVQSYLITSGVNPQQLEAVSYGKEAPVNPGHDESAWKENRRVEI 181
>gi|330829325|ref|YP_004392277.1| OmpA family protein [Aeromonas veronii B565]
gi|328804461|gb|AEB49660.1| OmpA family protein [Aeromonas veronii B565]
Length = 162
Score = 76.8 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/160 (18%), Positives = 67/160 (41%), Gaps = 6/160 (3%)
Query: 1 MQYSTIF-IILSAITMMSISGIDNLDTKISSPDTVLNESS----LQEQFSSSVGDSVFFD 55
M+ + + + L + + ++G + ++ + + E ++ + + V F
Sbjct: 1 MKITHLLKVTLLGLMLSLLAGCQSAPKGLTPEQIAVLKEQGFYLTDEGWTLDLANRVLFA 60
Query: 56 TSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
+ ++ P Q + LG L ++GH D G + + L L+RA +V + V
Sbjct: 61 NNVGALNPQTRQSVEKLGKTLLGVGLDKARVDGHTDNTGESSYNQQLSLKRAQSVADVLV 120
Query: 115 ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ G+ + +++ G+ MP + A NRR + +
Sbjct: 121 SVGMKPANLEIHGRGETMPLADNKTREGRAANRRVAIVIS 160
>gi|115373102|ref|ZP_01460404.1| OmpA/MotB [Stigmatella aurantiaca DW4/3-1]
gi|310824354|ref|YP_003956712.1| chemotaxis protein MotB [Stigmatella aurantiaca DW4/3-1]
gi|115369858|gb|EAU68791.1| OmpA/MotB [Stigmatella aurantiaca DW4/3-1]
gi|309397426|gb|ADO74885.1| chemotaxis protein MotB [Stigmatella aurantiaca DW4/3-1]
Length = 273
Score = 76.8 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 50/122 (40%), Gaps = 6/122 (4%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADELGS-- 94
S LQ + + + D + F + S + + L+ + L+ + +EGH D++ +
Sbjct: 145 SELQGRMTVQLKDKILFASGSTRVGKEGQEALAKIADALKSVQGRIIRVEGHTDDVPTDK 204
Query: 95 ---RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
S+ L L RA AV G+ + + YG+ P + + NRR +
Sbjct: 205 NGPFPSNWELSLARAMAVVRALQDAGVDPTVLSAAGYGQYQPIAANDSAENRSLNRRIEI 264
Query: 152 FL 153
L
Sbjct: 265 VL 266
>gi|90416365|ref|ZP_01224297.1| OmpA domain protein [marine gamma proteobacterium HTCC2207]
gi|90332090|gb|EAS47304.1| OmpA domain protein [marine gamma proteobacterium HTCC2207]
Length = 324
Score = 76.8 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 62/128 (48%), Gaps = 2/128 (1%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDF 83
I+ P+ + + QE + +V +V F+ + ++ L + + ++ + D D
Sbjct: 186 SQAIAEPEVEVEQEPEQEVRTITVRLNVEFEFNKDTVLAVYGDQLDAIAAAMKAQDDIDL 245
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDA 142
++EGH D G+ +++L RRA AV V GI A+R+ YG+ P ++
Sbjct: 246 VLEGHTDSRGADQYNMSLSDRRAKAVKAKLVEDYGIPAARISAVGYGETQPIATNETDEG 305
Query: 143 YAKNRRAI 150
A+NRR +
Sbjct: 306 RARNRRVV 313
>gi|21230404|ref|NP_636321.1| outer membrane protein [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gi|66769602|ref|YP_244364.1| outer membrane protein [Xanthomonas campestris pv. campestris str.
8004]
gi|188992813|ref|YP_001904823.1| OmpA family outer membrane protein [Xanthomonas campestris pv.
campestris str. B100]
gi|21111963|gb|AAM40245.1| outer membrane protein [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gi|66574934|gb|AAY50344.1| outer membrane protein [Xanthomonas campestris pv. campestris str.
8004]
gi|167734573|emb|CAP52783.1| OmpA family outer membrane protein [Xanthomonas campestris pv.
campestris]
Length = 365
Score = 76.8 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 55/139 (39%), Gaps = 8/139 (5%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDF 83
D +S S V FD + ++RP + +LS L+++
Sbjct: 227 DKCPTSQPGQTIGPDGCPVPVSIDLKGVNFDFNKSTLRPDAVSILSEATEILKRYPDLKV 286
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYG----- 137
+ GH D G+ + L RRA V++Y G+ ASR+ YG+ P
Sbjct: 287 EVAGHTDSKGTDAYNQKLSERRATTVYDYLTKNGVDASRLVGPIGYGESRPIAPNANPDG 346
Query: 138 -HDEDAYAKNRRAIVFLKG 155
+ + AKNRR + ++
Sbjct: 347 SDNPEGRAKNRRTELNVQN 365
>gi|319778881|ref|YP_004129794.1| Outer membrane protein ImpK/VasF, OmpA/MotB domain protein
[Taylorella equigenitalis MCE9]
gi|317108905|gb|ADU91651.1| Outer membrane protein ImpK/VasF, OmpA/MotB domain protein
[Taylorella equigenitalis MCE9]
Length = 445
Score = 76.8 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 50/126 (39%), Gaps = 4/126 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ +L ++ + FF++ S I+ V++ LG L++ + + LI GH D
Sbjct: 290 ENLLTVRDESDRSVVELRGDEFFESGSADIKKQFESVVNRLGDALDETEGNILITGHTDN 349
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
S+ L RA AV +R +R++ MP + +NR
Sbjct: 350 RPIKTIRFPSNWDLSQARADAVAKIIESRLTQPNRIRSEGKADTMPVTSNDTPENRKRNR 409
Query: 148 RAIVFL 153
R + L
Sbjct: 410 RVEITL 415
>gi|221213356|ref|ZP_03586331.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1]
gi|221166808|gb|EED99279.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1]
Length = 316
Score = 76.8 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++ F+T S ++ P Q+L + + + + I GH D G+R S+IAL RA
Sbjct: 209 NRTIEFETGSATLTPQGKQILDQMAAALAKLQNRTVDIIGHTDNSGNRTSNIALSQARAD 268
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV Y + +GI+ +M T G + P D A+NRR +
Sbjct: 269 AVKGYLITKGIAPQQMTTTGVGPDQPIAPNDTADGRARNRRIEFRV 314
>gi|239813231|ref|YP_002942141.1| hypothetical protein Vapar_0212 [Variovorax paradoxus S110]
gi|239799808|gb|ACS16875.1| type IV / VI secretion system protein, DotU family [Variovorax
paradoxus S110]
Length = 460
Score = 76.8 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 44/126 (34%), Gaps = 4/126 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
D +L ++ + F + S + VL+ + L + + L+ G +D+
Sbjct: 317 DGLLTVRDEADRSVVVLRGDGLFASGSDRVLDRYAPVLARVADALNSVEGNVLVSGFSDD 376
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
S+ L RA AV R R++ G P V A+NR
Sbjct: 377 QPIRSVRFPSNWQLSQARADAVKKMIATRVTRPERLRAEGRGDADPLVPNDSPANRARNR 436
Query: 148 RAIVFL 153
R V L
Sbjct: 437 RVEVTL 442
>gi|319793387|ref|YP_004155027.1| peptidoglycaN-associated lipoprotein [Variovorax paradoxus EPS]
gi|315595850|gb|ADU36916.1| peptidoglycan-associated lipoprotein [Variovorax paradoxus EPS]
Length = 172
Score = 76.8 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 17/168 (10%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISS----------------PDTVLNESSLQEQF 44
M TI+ + + S L+ + ++S+ Q
Sbjct: 1 MLKRTIYSLAIVALIAGCSSGTKLNETPVTDGRGTAGQQGGGASTVTPVNADQSAATAQG 60
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK-HDCDFLIEGHADELGSRNSSIALGL 103
V V+FD SY+++P ++ +L+ IEGH DE G R ++ALG
Sbjct: 61 PVGVARIVYFDYDSYTVKPEFQSIVDGHARFLKSAPQRRISIEGHTDERGGREYNLALGQ 120
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+RA AV G++ S+++ S+GKE P+V G E+A+A+NRRA +
Sbjct: 121 KRAEAVRRALTLLGVNDSQIEAVSFGKEKPAVQGGGEEAWAQNRRAEI 168
>gi|254481114|ref|ZP_05094360.1| OmpA family protein [marine gamma proteobacterium HTCC2148]
gi|214038909|gb|EEB79570.1| OmpA family protein [marine gamma proteobacterium HTCC2148]
Length = 209
Score = 76.8 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 49/131 (37%), Gaps = 9/131 (6%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADE 91
LN L ++ S+ + FD Y ++P L L + L E I GH D
Sbjct: 78 ATLNAKVLDQEIQISLSADLLFDFDQYQVKPEADAELRTLTTVLLETGSAQVRIVGHTDA 137
Query: 92 LGSRNSSIALGLRRAYAVFNYF--VARGISASRMKVTSYGKEMPSVYG------HDEDAY 143
LGS + L +RA ++ + S ++ G+ P + D
Sbjct: 138 LGSETYNQRLSEQRAESIKRWLLGPGHIGSDVTIETMGKGESEPVAPNSNIDGSDNVDGR 197
Query: 144 AKNRRAIVFLK 154
A NRR + ++
Sbjct: 198 ALNRRVELVIQ 208
>gi|296410008|gb|ADH15780.1| OmpP6 [Haemophilus influenzae]
Length = 136
Score = 76.8 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 3/138 (2%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS-NL 72
++ N D + S+ + ++V+F Y I +Q+L +
Sbjct: 1 AALAACSSSNNDAAGNGAAQTFGGYSVAD--LQQRYNTVYFGFDKYDITGEYVQILDAHA 58
Query: 73 GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
L+EG+ DE G+ +IALG RRA AV Y +G+ A ++ SYG+E
Sbjct: 59 AYLNATPAAKVLVEGNTDERGTPEYNIALGQRRADAVKGYLAGKGVDAGKLGTVSYGEEK 118
Query: 133 PSVYGHDEDAYAKNRRAI 150
P+V GHDE AY+KNRRA+
Sbjct: 119 PAVLGHDEAAYSKNRRAV 136
>gi|289627957|ref|ZP_06460911.1| flagellar motor protein MotD [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289647094|ref|ZP_06478437.1| flagellar motor protein MotD [Pseudomonas syringae pv. aesculi str.
2250]
gi|298487807|ref|ZP_07005848.1| Flagellar motor rotation protein motB [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298157899|gb|EFH98978.1| Flagellar motor rotation protein motB [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|330866472|gb|EGH01181.1| flagellar motor protein MotD [Pseudomonas syringae pv. aesculi str.
0893_23]
Length = 295
Score = 76.8 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 18/127 (14%), Positives = 44/127 (34%), Gaps = 4/127 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ + + S+ F + ++ + +++ D +EG D+
Sbjct: 118 SDQMTVRGNELWIEIELNSSLLFVSGDAIPSDKAFTIIEKVSGIVKRFDNPIHVEGFTDD 177
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
++ L R+ ++ G++ +R+ YG+ P AKNR
Sbjct: 178 QPISTAQFPTNWELSSARSASIVRMLAMDGVNPARLASVGYGEFQPIAPNTTAAGRAKNR 237
Query: 148 RAIVFLK 154
R ++ +
Sbjct: 238 RVVLVIS 244
>gi|238754016|ref|ZP_04615375.1| Inner membrane lipoprotein yiaD [Yersinia ruckeri ATCC 29473]
gi|238707768|gb|EEQ00127.1| Inner membrane lipoprotein yiaD [Yersinia ruckeri ATCC 29473]
Length = 219
Score = 76.8 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FDT+S +++PA L+ + L++++ + G+ D
Sbjct: 94 GTGVSVTRQGDNIVLNMPNNVTFDTNSSNLKPAGANTLTGVAMVLKEYEKTAVNVTGYTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G+R ++ L +RA V + + +G++A+R++ G + P A+NRR
Sbjct: 154 STGARAHNMILSQQRAETVGSALITQGVAANRIRTIGAGPDNPVATNSTTAGKAQNRRVE 213
Query: 151 VFLK 154
+ L
Sbjct: 214 ITLS 217
>gi|149183513|ref|ZP_01861940.1| flagellar motor protein MotB [Bacillus sp. SG-1]
gi|148848785|gb|EDL63008.1| flagellar motor protein MotB [Bacillus sp. SG-1]
Length = 253
Score = 76.8 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 41/133 (30%), Gaps = 6/133 (4%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLI 85
+ T E ++ D+V F + S + D + L LE +I
Sbjct: 116 AANELQTQFATELTSEGLLLTIRDNVLFQSGSAVVGAKDEGIAKELSGLLEMDTPRSVII 175
Query: 86 EGHADELGSRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
GH D + ++ R + + + +G+ P
Sbjct: 176 SGHTDNVPISTANYESNWELSVMRAVNFMKIILKNQNLDPRWFSAKGFGEFKPMASNDTS 235
Query: 141 DAYAKNRRAIVFL 153
+ AKNRR V +
Sbjct: 236 EGRAKNRRVEVLI 248
>gi|330959642|gb|EGH59902.1| hypothetical protein PMA4326_13904 [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 220
Score = 76.8 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 1/130 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFL 84
K T L+ + ++ + + F T S ++PA Q LS + + L+ D
Sbjct: 89 QKGMDATTSLDPVTGRQMMTVQAPSDIAFATGSADLQPAAFQGLSAVANALKDQKDLMLN 148
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
I GH D GSR + L RA AV Y A G+ A + V G MP A
Sbjct: 149 ITGHTDSTGSRQFNNLLSYARAQAVAQYLYAAGVPAQVIAVRGVGPSMPVATDATSQGRA 208
Query: 145 KNRRAIVFLK 154
+NRR + +K
Sbjct: 209 QNRRVEIQIK 218
>gi|220904130|ref|YP_002479442.1| peptidoglycan-associated lipoprotein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219868429|gb|ACL48764.1| peptidoglycan-associated lipoprotein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 155
Score = 76.8 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 77/154 (50%), Gaps = 3/154 (1%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ + + L + + + G T D + ++ V+F ++
Sbjct: 1 MKRYALILAL-VMALAAGFGCAKKTTGEPGYDDGMT-PEMRAAVQQITDGRVYFAFDKFN 58
Query: 61 IRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
+ ++L G L+++ IEG+ D+ G++ ++ALG RRA A + Y V G++
Sbjct: 59 VENQYKEMLKQKGDLLKQYPAIRVRIEGNCDDRGTQEYNLALGERRARAAYEYLVMMGVN 118
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+++++ SYGKE P+V G++E A+AKNRR +
Sbjct: 119 PNQLEMISYGKENPAVQGNNEAAWAKNRRDDFRV 152
>gi|329946279|ref|ZP_08293873.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386]
gi|328527571|gb|EGF54566.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386]
Length = 416
Score = 76.8 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 57/146 (39%), Gaps = 8/146 (5%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
+S + + P + ++ DSV FD S +R L+NL +
Sbjct: 269 TVSAKPVPKAGKVGTFPSIDAAKPVQSCGTVITLEDSVLFDFGSSDLRSEASTTLTNLAT 328
Query: 75 WLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
L+ ++GH D + S+ L +RA AV + + G++A+ ++ YG+ P
Sbjct: 329 VLKDSKAPKVQVQGHTDSVSDDASNQTLSEQRAKAVTDALTSDGVTAA-IESVGYGETRP 387
Query: 134 SVYG------HDEDAYAKNRRAIVFL 153
+ NRR VF+
Sbjct: 388 VAPNESSDGFDNPAGRRLNRRVEVFV 413
>gi|328953892|ref|YP_004371226.1| peptidoglycan-associated lipoprotein [Desulfobacca acetoxidans DSM
11109]
gi|328454216|gb|AEB10045.1| peptidoglycan-associated lipoprotein [Desulfobacca acetoxidans DSM
11109]
Length = 191
Score = 76.8 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/177 (23%), Positives = 74/177 (41%), Gaps = 29/177 (16%)
Query: 8 IILSAITMMSISGIDNLDT-KISSPDTVLNESSLQEQFSSSVG----------------- 49
++L I + ++G + PD E ++ S G
Sbjct: 11 LLLCLIPALMLTGCAKKKVVTTAGPDETTTEPGQIQEESLGAGGERLGRSRKGVSARAQA 70
Query: 50 ----------DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSS 98
+ VFF+ +++ +L S+ + + IEGH D GS + +
Sbjct: 71 YGPEGIAFESEDVFFEYDQFTLTSESRSLLQKKASFLQKHPEIQITIEGHCDIRGSSDYN 130
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+ LG +RA + +Y GI+ +R+ SYGKE P +G E+A+A+NRR + + G
Sbjct: 131 LGLGQKRADSAKSYLQDLGIAGNRLSTISYGKEQPVAHGDTEEAHARNRRGHLVIGG 187
>gi|300692236|ref|YP_003753231.1| peptidoglycan-associated lipoprotein, protein pal, component of
tol-pal system [Ralstonia solanacearum PSI07]
gi|299079296|emb|CBJ51968.1| Peptidoglycan-associated lipoprotein, protein pal, component of
tol-pal system [Ralstonia solanacearum PSI07]
Length = 172
Score = 76.8 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/136 (31%), Positives = 71/136 (52%), Gaps = 5/136 (3%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+ +G D + L + S SV+FD SY+++P +L+ +L
Sbjct: 39 AATGADTRNVMPVDA----TRDELTDPNSPLAKRSVYFDFDSYTVKPEYQGLLTQHARYL 94
Query: 77 EKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+ H LI+G+ DE G+ ++ALG +RA AV + G+ S+M+ S GKE P
Sbjct: 95 QSHNQRKVLIQGNTDERGTSEYNLALGQKRAEAVRRALSSLGVPDSQMEAVSLGKEKPQA 154
Query: 136 YGHDEDAYAKNRRAIV 151
GHDE+++A+NRR+ +
Sbjct: 155 TGHDEESWAQNRRSDI 170
>gi|295706900|ref|YP_003599975.1| putative flagellar motor channel protein [Bacillus megaterium DSM
319]
gi|294804559|gb|ADF41625.1| putative flagellar motor channel protein [Bacillus megaterium DSM
319]
Length = 203
Score = 76.8 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 42/130 (32%), Gaps = 5/130 (3%)
Query: 34 VLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG 93
V+ + + + V F+T I L LG D +EGH D
Sbjct: 73 VITAKRDERGVVLILQEQVLFETGQADILKKGTPFLDELGRLFSTIPNDIKVEGHTDNRP 132
Query: 94 SRNS----SIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
+ L RA V Y SA+R + YG P V D KNRR
Sbjct: 133 IHTYRYPSNWELSAARASGVIRYLTNHFSLSANRFEALGYGDTKPLVPNTSNDNLQKNRR 192
Query: 149 AIVFLKGCRA 158
+ + A
Sbjct: 193 VEIIISDPEA 202
>gi|115526883|ref|YP_783794.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
BisA53]
gi|115520830|gb|ABJ08814.1| OmpA/MotB domain protein [Rhodopseudomonas palustris BisA53]
Length = 465
Score = 76.8 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 56/135 (41%), Gaps = 2/135 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSV-GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKH 79
++ + ++ + Q+ FS + + F++ +I + +L L +
Sbjct: 330 SKVEVSVKPAAAPVDSTVCQQLFSDLLAKGKIRFESGKATIDGDSLGLLDRLIETAMRCS 389
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
I GH D G ++ AL RRA AV +Y V G+ A R +G P +
Sbjct: 390 SAVIEIAGHTDGDGEAAANKALSERRAQAVVDYMVKAGLPADRFHPVGFGSAQPVASNDN 449
Query: 140 EDAYAKNRRAIVFLK 154
++ A+NRR ++
Sbjct: 450 DEGKAQNRRIEFTVR 464
>gi|146298022|ref|YP_001192613.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
UW101]
gi|146152440|gb|ABQ03294.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
Length = 231
Score = 76.8 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 2/134 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVG-DSVFFDTSSYSIRPADIQVLSNLGSWLEKH- 79
D +I + + E ++ +SV FDT+ ++ P L L ++
Sbjct: 82 DKQAREIDQALPGASVERVGEGIHLTLNENSVRFDTNKSTLTPTAKANLDKLVPVFNEYG 141
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
D D I G+ D G ++ L +RA +V Y V++G+ +SR K + G P
Sbjct: 142 DTDIQIFGYTDNTGKPEYNLTLSGQRAASVQAYLVSKGLKSSRFKTSGLGIADPIATNDT 201
Query: 140 EDAYAKNRRAIVFL 153
+ A+NRR +
Sbjct: 202 PEGRAQNRRVEFSI 215
>gi|284035678|ref|YP_003385608.1| V-type H(+)-translocating pyrophosphatase [Spirosoma linguale DSM
74]
gi|283814971|gb|ADB36809.1| V-type H(+)-translocating pyrophosphatase [Spirosoma linguale DSM
74]
Length = 890
Score = 76.8 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYA 108
D + F+T +++P L N+ L+ + + + G+ D G+ N+++ L RA +
Sbjct: 783 DRLTFETGKATLKPESQVQLGNVAQILKAYPNVNVKVGGYTDNTGNANANLKLSGERASS 842
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V GI SR++ YG+E P E+ A+NRR + +
Sbjct: 843 VEAELEKLGIDKSRLEAEGYGQEHPVASNDTEEGRAQNRRISMRV 887
>gi|260428791|ref|ZP_05782768.1| OmpA domain protein [Citreicella sp. SE45]
gi|260419414|gb|EEX12667.1| OmpA domain protein [Citreicella sp. SE45]
Length = 174
Score = 76.8 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 15/169 (8%)
Query: 1 MQYSTIFIILSAITMMSISGIDNL--------------DTKISSPDTVLNESSLQEQFSS 46
M Y + ++++A+ M+ N ++ + F+
Sbjct: 1 MTYFSKALMIAAVLGMAACTNGNRFSDADAAGGYGAGAGANGGIVPGSASDPASPAYFNQ 60
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRR 105
++GD VFF ++ P L W + D +IEGHADE G+R +IALG RR
Sbjct: 61 TIGDRVFFAVDQSTLSPQAQATLDAQAQWLMTNSDYLAVIEGHADEQGTREYNIALGARR 120
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
A A Y V++GI+++R++ SYGKE P +E Y+KNRRA+ +
Sbjct: 121 ANATMEYLVSKGIASNRLRFISYGKERPVEVCAEEACYSKNRRAVTVIS 169
>gi|113868784|ref|YP_727273.1| outer membrane protein or related peptidoglycan-associated
(lipo)protein [Ralstonia eutropha H16]
gi|113527560|emb|CAJ93905.1| outer membrane protein or related peptidoglycan-associated
(lipo)protein [Ralstonia eutropha H16]
Length = 168
Score = 76.8 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIE 86
+ V L + S SV+FD SY+++ +L + LI+
Sbjct: 42 PRAVTPVTAADPLNDPNSPLAKRSVYFDFDSYTVKSDYQGMLGEHAKYLGSNKGRKILIQ 101
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
G+ DE G+ ++ALG +RA AV + G+ +M+ S GKE P GHDE ++A+N
Sbjct: 102 GNTDERGTSEYNLALGQKRAEAVRRSLASMGVPDGQMEAVSLGKEKPKATGHDEASWAEN 161
Query: 147 RRAIV 151
RRA +
Sbjct: 162 RRADI 166
>gi|89055277|ref|YP_510728.1| OmpA/MotB [Jannaschia sp. CCS1]
gi|88864826|gb|ABD55703.1| OmpA/MotB [Jannaschia sp. CCS1]
Length = 481
Score = 76.8 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 1/109 (0%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRA 106
+ ++ FD S ++R A +Q +S L + + +++GH D GS + L RA
Sbjct: 372 LDANLLFDFDSATLRRAGLQAVSELAAAIRSGQVSQVIVDGHTDAAGSDAYNQTLSQERA 431
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
AV + +G++ + ++G+ P E +NRR V L G
Sbjct: 432 VAVAQALMVQGVAQGLLTTRAFGESRPVADNGSEAGAQQNRRVEVLLIG 480
>gi|215433411|gb|ACJ66671.1| OmpA domain protein [Myxococcus fulvus HW-1]
Length = 615
Score = 76.8 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 2/108 (1%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRR 105
V VFF+ + I+ ++L + + +H ++ H D+ G +++ L R
Sbjct: 495 VMGKVFFEPTQARIQKRSFELLDWVARVIREHPEIPLVVVGAHTDDRGFPDANRRLSQAR 554
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
A AV Y + R I+ R+K YG+E P + NRR L
Sbjct: 555 AEAVRQYLIGRDIAPERLKALGYGQERPIDSNATSNGRENNRRVEFLL 602
>gi|71737581|ref|YP_275515.1| flagellar motor protein MotD [Pseudomonas syringae pv. phaseolicola
1448A]
gi|71558134|gb|AAZ37345.1| chemotaxis protein MotB [Pseudomonas syringae pv. phaseolicola
1448A]
gi|283133060|dbj|BAI63827.1| flagellar motor protein MotD [Pseudomonas syringae pv. tabaci]
gi|320325140|gb|EFW81209.1| flagellar motor protein MotD [Pseudomonas syringae pv. glycinea
str. B076]
gi|320329399|gb|EFW85392.1| flagellar motor protein MotD [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330889033|gb|EGH21694.1| flagellar motor protein MotD [Pseudomonas syringae pv. mori str.
301020]
gi|330986516|gb|EGH84619.1| flagellar motor protein MotD [Pseudomonas syringae pv. lachrymans
str. M301315]
Length = 295
Score = 76.8 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 18/127 (14%), Positives = 44/127 (34%), Gaps = 4/127 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ + + S+ F + ++ + +++ D +EG D+
Sbjct: 118 SDQMTVRGNELWIEIELNSSLLFVSGDAIPSDKAFTIIEKVSGIVKRFDNPIHVEGFTDD 177
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
++ L R+ ++ G++ +R+ YG+ P AKNR
Sbjct: 178 QPISTAQFPTNWELSSARSASIVRMLAMDGVNPARLASVGYGEFQPIAPNTTAAGRAKNR 237
Query: 148 RAIVFLK 154
R ++ +
Sbjct: 238 RVVLVIS 244
>gi|323357271|ref|YP_004223667.1| outer membrane protein [Microbacterium testaceum StLB037]
gi|323273642|dbj|BAJ73787.1| outer membrane protein [Microbacterium testaceum StLB037]
Length = 165
Score = 76.8 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 47/129 (36%), Gaps = 7/129 (5%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF-LIEGHA 89
P + ++ D+V FD S IRP VL +L + L + + GH
Sbjct: 33 PPLAALAPVASCGTTLTLSDAVLFDFDSAEIRPDAAGVLDSLAALLTQGAVPAATVSGHT 92
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG-----HDEDAYA 144
D +G+ + L RRA AV + RG YG+ P +
Sbjct: 93 DAIGTDAENQVLSERRAQAVVDALRRRGTQTDW-TAEGYGESRPVAANELDGVDNPAGRQ 151
Query: 145 KNRRAIVFL 153
NRR + +
Sbjct: 152 LNRRVEILV 160
>gi|257484887|ref|ZP_05638928.1| flagellar motor protein MotD [Pseudomonas syringae pv. tabaci ATCC
11528]
Length = 295
Score = 76.8 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 18/127 (14%), Positives = 44/127 (34%), Gaps = 4/127 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ + + S+ F + ++ + +++ D +EG D+
Sbjct: 118 SDQMTVRGNELWIEIELNSSLLFVSGDAIPSDKAFTIIEKVSGIVKRFDNPIHVEGFTDD 177
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
++ L R+ ++ G++ +R+ YG+ P AKNR
Sbjct: 178 QPISTAQFPTNWELSSARSASIVRMLAMDGVNPARLASVGYGEFQPIAPNTTAAGRAKNR 237
Query: 148 RAIVFLK 154
R ++ +
Sbjct: 238 RVVLVIS 244
>gi|93005202|ref|YP_579639.1| OmpA/MotB [Psychrobacter cryohalolentis K5]
gi|92392880|gb|ABE74155.1| OmpA/MotB [Psychrobacter cryohalolentis K5]
Length = 392
Score = 76.8 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 45/113 (39%), Gaps = 3/113 (2%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADEL-GSRNSSIALGLRRAYA 108
VFFD +I+ ++ + + ++ +EGHA + S + L RA A
Sbjct: 270 RVFFDNDKSAIKTQYKPEIAKVAEKMREYPNSTARVEGHASKTGPSARYNQRLSEARAVA 329
Query: 109 VFNYFVARGIS-ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
V + +R+ YG + P + E+ A NRR + G + T
Sbjct: 330 VKSMLTNEFGIAPNRLSTVGYGYDQPIADNNTEEGRAMNRRVYAIITGDKTMT 382
>gi|194290406|ref|YP_002006313.1| colicin transport component, peptidoglycan-associated outer
membrane lipoprotein [Cupriavidus taiwanensis LMG 19424]
gi|193224241|emb|CAQ70250.1| colicin transport component, peptidoglycan-associated outer
membrane lipoprotein [Cupriavidus taiwanensis LMG 19424]
Length = 169
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/125 (32%), Positives = 63/125 (50%), Gaps = 1/125 (0%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIE 86
+ V L + S SV+FD SY+++P +L + LI+
Sbjct: 43 PRAVTPVTAADPLNDPNSPLAKRSVYFDFDSYTVKPDYQGMLGAHAKYLGTNQGRKILIQ 102
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
G+ DE G+ ++ALG +RA AV + G+ S+M+ S GKE P GHDE ++A+N
Sbjct: 103 GNTDERGTSEYNLALGQKRAEAVRRSLASMGVPDSQMEAVSLGKEKPKATGHDEASWAEN 162
Query: 147 RRAIV 151
RRA +
Sbjct: 163 RRADI 167
>gi|313500575|gb|ADR61941.1| OmpA/MotB domain protein [Pseudomonas putida BIRD-1]
Length = 162
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 51/141 (36%), Gaps = 6/141 (4%)
Query: 19 SGIDNLDTKISSPDTVLN-----ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+G + K +P+ + + E ++ + V F + S+ ++ +G
Sbjct: 19 TGCQSAPPKGLTPEQIAVLKREGFTPTDEGWAYDLSGKVLFGSDLDSLNGQSQAIVERIG 78
Query: 74 SWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
L ++GHAD G + L RRA +V V G+ A ++ G
Sbjct: 79 KALLGVGIQGVRVDGHADSSGKAAYNQQLSERRAQSVTKALVGVGMQAQNIQSRGLGSSQ 138
Query: 133 PSVYGHDEDAYAKNRRAIVFL 153
P +NRR + +
Sbjct: 139 PVADNRTSAGRTENRRVSIVV 159
>gi|91787475|ref|YP_548427.1| OmpA/MotB [Polaromonas sp. JS666]
gi|91696700|gb|ABE43529.1| OmpA/MotB [Polaromonas sp. JS666]
Length = 227
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 53/135 (39%), Gaps = 1/135 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
+ ++ V + + + V FD +I+P +L+ + +
Sbjct: 86 EQKAAMERATAGTGVAVSQTPDNRLKLDIPSDVSFDVGRAAIKPNFAPILNQFATSLNQN 145
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
I GH D GS + L + RA A +Y V+RG++ +R+ G P +
Sbjct: 146 QVTTVTIIGHTDSTGSDAINNPLSVDRANAARDYLVSRGVARTRIATDGRGSREPVADNN 205
Query: 139 DEDAYAKNRRAIVFL 153
+ KNRR +++
Sbjct: 206 TQQGRDKNRRVEIYV 220
>gi|15836945|ref|NP_297633.1| outer membrane protein [Xylella fastidiosa 9a5c]
gi|9105169|gb|AAF83153.1|AE003886_12 outer membrane protein [Xylella fastidiosa 9a5c]
Length = 389
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 47/136 (34%), Gaps = 2/136 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
D D +S S V FD +RP + VL D
Sbjct: 254 DCDDKCPNSQPGQTIGPDGCPVPVSIDLKGVNFDFDKSKLRPDAVAVLKEATEILRRYPD 313
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHD 139
+ GH D G + L RRA V++Y GI ASR+ YG+ P
Sbjct: 314 LHVEVAGHTDSTGPAAYNKKLSERRAKVVYDYLRNNGIDASRLIGPVGYGETHPIDTNKT 373
Query: 140 EDAYAKNRRAIVFLKG 155
AKNRR + ++
Sbjct: 374 PAGRAKNRRTELNVQN 389
>gi|28199584|ref|NP_779898.1| outer membrane protein [Xylella fastidiosa Temecula1]
gi|28057699|gb|AAO29547.1| outer membrane protein [Xylella fastidiosa Temecula1]
Length = 389
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 47/136 (34%), Gaps = 2/136 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
D D +S S V FD +RP + VL D
Sbjct: 254 DCDDKCPNSQPGQTIGPDGCPVPVSIDLKGVNFDFDKSKLRPDAVAVLKEATEILRRYPD 313
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHD 139
+ GH D G + L RRA V++Y GI ASR+ YG+ P
Sbjct: 314 LHVEVAGHTDSTGPAAYNKKLSERRAKVVYDYLRNNGIDASRLIGPVGYGETHPIDTNKT 373
Query: 140 EDAYAKNRRAIVFLKG 155
AKNRR + ++
Sbjct: 374 PAGRAKNRRTELNVQN 389
>gi|33598186|ref|NP_885829.1| putative outer membrane protein [Bordetella parapertussis 12822]
gi|33566744|emb|CAE38956.1| putative outer membrane protein [Bordetella parapertussis]
Length = 208
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 55/133 (41%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
++ +S + ++ +V FDT ++PA + VL ++ + +
Sbjct: 71 QDVQQSGASSLGIDVVEMPDGSLKVNIPSNVSFDTDKSQLKPALLPVLDSVARALNQHPE 130
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ GH D GS + L + RA AV +Y +G++ RM V G P
Sbjct: 131 LRTKVVGHTDSTGSAAHNQQLSVNRARAVTSYLGKQGVAQGRMTVEGRGANDPVGDNATA 190
Query: 141 DAYAKNRRAIVFL 153
+ A NRR V+L
Sbjct: 191 EGRAANRRVEVYL 203
>gi|71276570|ref|ZP_00652844.1| OmpA/MotB [Xylella fastidiosa Dixon]
gi|71901217|ref|ZP_00683319.1| OmpA/MotB [Xylella fastidiosa Ann-1]
gi|170730957|ref|YP_001776390.1| outer membrane protein [Xylella fastidiosa M12]
gi|71162641|gb|EAO12369.1| OmpA/MotB [Xylella fastidiosa Dixon]
gi|71729028|gb|EAO31157.1| OmpA/MotB [Xylella fastidiosa Ann-1]
gi|167965750|gb|ACA12760.1| outer membrane protein [Xylella fastidiosa M12]
Length = 375
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 47/136 (34%), Gaps = 2/136 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
D D +S S V FD +RP + VL D
Sbjct: 240 DCDDKCPNSQPGQTIGPDGCPVPVSIDLKGVNFDFDKSKLRPDAVAVLKEATEILRRYPD 299
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHD 139
+ GH D G + L RRA V++Y GI ASR+ YG+ P
Sbjct: 300 LHVEVAGHTDSTGPAAYNKKLSERRAKVVYDYLRNNGIDASRLIGPVGYGETHPIDTNKT 359
Query: 140 EDAYAKNRRAIVFLKG 155
AKNRR + ++
Sbjct: 360 PAGRAKNRRTELNVQN 375
>gi|153940977|ref|YP_001391952.1| chemotaxis motB protein [Clostridium botulinum F str. Langeland]
gi|152936873|gb|ABS42371.1| chemotaxis motB protein [Clostridium botulinum F str. Langeland]
gi|295319971|gb|ADG00349.1| chemotaxis motB protein [Clostridium botulinum F str. 230613]
Length = 247
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 49/126 (38%), Gaps = 5/126 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ + + D+V F+ I+P Q++ + + + +IEGH D +
Sbjct: 112 SSVEVKEDGRGIIIQLRDNVLFEIGRADIKPQSKQIMDKINGLIATLPNEVIIEGHTDNV 171
Query: 93 GS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
S+ L RA V YFV + + R YG+ P + + AKNR
Sbjct: 172 PIKNEVYGSNWELSTARAVNVLRYFVETKKQNPVRFTAAGYGEYRPIAQNNSDANRAKNR 231
Query: 148 RAIVFL 153
R + +
Sbjct: 232 RVNIVI 237
>gi|34497269|ref|NP_901484.1| flagellar motor protein MotD [Chromobacterium violaceum ATCC 12472]
gi|34103125|gb|AAQ59488.1| chemotaxis motB protein [Chromobacterium violaceum ATCC 12472]
Length = 277
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/153 (18%), Positives = 50/153 (32%), Gaps = 7/153 (4%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
A + ++ + + + + DS F + ++SN
Sbjct: 100 AAKLGQLTQNLAKALSPLVQSGEVTITQSNQGIHIDIRDSALFAVGQAVPNQQSMPLMSN 159
Query: 72 LGSWLEKHDCDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
+ L D +EG D+ S+ L RA V F G+ R+
Sbjct: 160 MAKLLAGVDNAIKVEGFTDDAPIRTPVFPSNWELSAARAGGVVRLFQESGVDPQRLVAVG 219
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
+G P D A+NRR + ++ ANT
Sbjct: 220 HGANQPVADNATADGRARNRRVTISVQ---ANT 249
>gi|71898965|ref|ZP_00681131.1| OmpA/MotB [Xylella fastidiosa Ann-1]
gi|71731211|gb|EAO33276.1| OmpA/MotB [Xylella fastidiosa Ann-1]
Length = 375
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 47/136 (34%), Gaps = 2/136 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
D D +S S V FD +RP + VL D
Sbjct: 240 DCDDKCPNSQPGQTIGPDGCPVPVSIDLKGVNFDFDKSKLRPDAVAVLKEATEILRRYPD 299
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHD 139
+ GH D G + L RRA V++Y GI ASR+ YG+ P
Sbjct: 300 LHVEVAGHTDSTGPAAYNKKLSERRAKVVYDYLRNNGIDASRLIGPVGYGETHPIDTNKT 359
Query: 140 EDAYAKNRRAIVFLKG 155
AKNRR + ++
Sbjct: 360 PAGRAKNRRTELNVQN 375
>gi|332969616|gb|EGK08634.1| OmpA family protein [Kingella kingae ATCC 23330]
Length = 258
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHA 89
+T + Q ++ ++V F T Y + PA L+N L ++ I GH
Sbjct: 126 ANTGVEVERQGNQIKLTMPENVTFATGRYDLSPAAQSALANAAQTLATYNETTITIVGHT 185
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GS + L RA AV +Y RG++A+RM V+ G P + A+NRR
Sbjct: 186 DSTGSDAINNPLSYNRANAVASYLNQRGVAANRMSVSGQGSRQPIADNSTDYGRAQNRRV 245
Query: 150 IVFL 153
+ +
Sbjct: 246 EILI 249
>gi|323143608|ref|ZP_08078285.1| peptidoglycan-associated lipoprotein [Succinatimonas hippei YIT
12066]
gi|322416671|gb|EFY07328.1| peptidoglycan-associated lipoprotein [Succinatimonas hippei YIT
12066]
Length = 181
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 8/149 (5%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQ-------FSSSVGDSVFFDTSSYSIRP 63
S + SG+ PD + + + ++++F+ S I
Sbjct: 31 SGTLVEDASGMGGDVQVGLDPDGAVTVTGTDGYGSNFSGPEALRENNTIYFNYDSDQIHD 90
Query: 64 ADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASR 122
+ V+ + E D +IEGH DE G+ +IALG RRA +V Y G+ ++
Sbjct: 91 NYVGVMQAHAKYLRENPDAHIIIEGHTDERGTPEYNIALGERRARSVARYMQNLGVDVNQ 150
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ + SYG+E P V GH+E+A+AKNRRA++
Sbjct: 151 LSIVSYGEEKPLVVGHNENAWAKNRRAVI 179
>gi|30314418|gb|AAP15418.1| outer membrane lipoprotein precursor [Burkholderia cenocepacia]
gi|30314424|gb|AAP15421.1| outer membrane lipoprotein precursor [Burkholderia cenocepacia]
gi|30314448|gb|AAP15433.1| outer membrane lipoprotein precursor [Burkholderia cenocepacia]
Length = 150
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/137 (31%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 18 ISGIDNLDTKISSPDTV-LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+ + T+ S+ + +N L + S S++FD SYS++ ++ +L
Sbjct: 11 ANNAGAVSTQPSADNVAQVNVDPLNDPNSPLAKRSIYFDFDSYSVKDEYQPLMQQHAQYL 70
Query: 77 EKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+ H LI+G+ DE G+ ++ALG +RA AV G++ S+M+ S GKE P
Sbjct: 71 KSHPQRHVLIQGNTDERGTSEYNLALGQKRAEAVRRAMALLGVNDSQMEAVSLGKEKPQA 130
Query: 136 YGHDEDAYAKNRRAIVF 152
GHDE ++A+NRRA +
Sbjct: 131 TGHDEASWAQNRRADLV 147
>gi|229591493|ref|YP_002873612.1| hypothetical protein PFLU4061 [Pseudomonas fluorescens SBW25]
gi|229363359|emb|CAY50495.1| putative outer membrane protein [Pseudomonas fluorescens SBW25]
Length = 257
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 49/131 (37%), Gaps = 2/131 (1%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFL 84
T + + + GD V FDT ++P + L ++L + +
Sbjct: 119 TAQLKALQAMKARPTERGQVVTFGD-VLFDTGRAELKPGSQRDFQGLATFLLQNPERQVR 177
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+EG D G + +L RRA AV G+ RM V YGK+ P +
Sbjct: 178 VEGFTDSTGGDAFNQSLSERRAQAVARGLQQLGVGPQRMAVMGYGKQFPVADNVSAQSRQ 237
Query: 145 KNRRAIVFLKG 155
NRR V +
Sbjct: 238 LNRRVEVIVSN 248
>gi|148380609|ref|YP_001255150.1| chemotaxis MotB protein [Clostridium botulinum A str. ATCC 3502]
gi|153936730|ref|YP_001388364.1| chemotaxis motB protein [Clostridium botulinum A str. Hall]
gi|148290093|emb|CAL84212.1| putative chemotaxis MotB protein [Clostridium botulinum A str. ATCC
3502]
gi|152932644|gb|ABS38143.1| chemotaxis protein MotB [Clostridium botulinum A str. Hall]
Length = 247
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 49/126 (38%), Gaps = 5/126 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ + + D+V F+ I+P Q++ + + + +IEGH D +
Sbjct: 112 SSVEVKEDGRGIIIQLRDNVLFEIGRADIKPQSKQIMDKINGLIATLPNEVIIEGHTDNV 171
Query: 93 GS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
S+ L RA V YFV + + R YG+ P + + AKNR
Sbjct: 172 PIKNEVYGSNWELSTARAVNVLRYFVETKKQNPVRFTAAGYGEYRPIAQNNSDANRAKNR 231
Query: 148 RAIVFL 153
R + +
Sbjct: 232 RVNIVI 237
>gi|197116786|ref|YP_002137213.1| OmpA family outer membrane protein [Geobacter bemidjiensis Bem]
gi|197086146|gb|ACH37417.1| OmpA family outer membrane protein [Geobacter bemidjiensis Bem]
Length = 459
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 2/127 (1%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEG 87
+ + V + V FD IRP ++ +G +++++ +IEG
Sbjct: 203 APLEPVPAAEPAPGHYKYCVTLQGEFDIDKAEIRPEYRDEVATVGKFMKQYPTTTAVIEG 262
Query: 88 HADELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
H D +G ++ L RRA AV +Y GI SR++ +G P + ++ N
Sbjct: 263 HTDNVGDPQYNLDLSKRRAQAVVDYLVDNYGIERSRLEARGFGMARPIATNNTDEGRQAN 322
Query: 147 RRAIVFL 153
RR +
Sbjct: 323 RRIEAII 329
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 2/102 (1%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FD+ I+P ++ +G ++ K+ +IEGH D +G + ++ L RRA Y
Sbjct: 352 FDSGKADIKPQYRDEMAKVGEYMNKYPTTTAVIEGHTDNVGGSDYNMKLSQRRAENAVQY 411
Query: 113 FVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V I SR+ YG Y + AKNRR +
Sbjct: 412 LVQNFGIDKSRLSAKGYGYTRRIAYNSTPEGRAKNRRINAVI 453
>gi|182682319|ref|YP_001830479.1| OmpA/MotB domain-containing protein [Xylella fastidiosa M23]
gi|182632429|gb|ACB93205.1| OmpA/MotB domain protein [Xylella fastidiosa M23]
gi|307578598|gb|ADN62567.1| OmpA/MotB domain-containing protein [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 375
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 47/136 (34%), Gaps = 2/136 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
D D +S S V FD +RP + VL D
Sbjct: 240 DCDDKCPNSQPGQTIGPDGCPVPVSIDLKGVNFDFDKSKLRPDAVAVLKEATEILRRYPD 299
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHD 139
+ GH D G + L RRA V++Y GI ASR+ YG+ P
Sbjct: 300 LHVEVAGHTDSTGPAAYNKKLSERRAKVVYDYLRNNGIDASRLIGPVGYGETHPIDTNKT 359
Query: 140 EDAYAKNRRAIVFLKG 155
AKNRR + ++
Sbjct: 360 PAGRAKNRRTELNVQN 375
>gi|170697917|ref|ZP_02889001.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
gi|170137192|gb|EDT05436.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
Length = 587
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 46/124 (37%), Gaps = 2/124 (1%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPAD-IQVLSNLGSWLEKHDCDFLIEGHAD 90
E ++ FD+ +R ++ L L+ G+AD
Sbjct: 449 AIASYEPPPPPPAVVTLDSMSLFDSGKARLRTGTTRAMVDALELIKAHPGKRVLVAGYAD 508
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
+ G + ++ L + RA AV ++ + I +R + YG P + AKNRR
Sbjct: 509 DQGRPDRNLKLSIDRASAVRDWLIEASGIPPTRFAIQGYGDTRPVADNATPEGRAKNRRV 568
Query: 150 IVFL 153
+ L
Sbjct: 569 EITL 572
>gi|90019934|ref|YP_525761.1| hypothetical protein Sde_0285 [Saccharophagus degradans 2-40]
gi|89949534|gb|ABD79549.1| OmpA/MotB [Saccharophagus degradans 2-40]
Length = 364
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 8/116 (6%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FD+ +++P L+ L + L +H I GH D +G +++ L RA +V N
Sbjct: 198 HFDSGKSALKPESDSELAELATILNEHPALKIKIVGHTDNVGDSKANLKLSAARAKSVLN 257
Query: 112 YFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV------FLKGCRANT 160
V +A+ + G+ P + AKNRR + + G ANT
Sbjct: 258 ALVKNFNVNAANLSAEGQGETQPVDTNSTDMGRAKNRRVEIIAINPEVIYGGTANT 313
>gi|304438419|ref|ZP_07398359.1| flagellar motor protein MotB [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304368502|gb|EFM22187.1| flagellar motor protein MotB [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 306
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 43/128 (33%), Gaps = 6/128 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
++ +E + + F + S +++ +++ + L I GH D
Sbjct: 115 QDQVSTELNEEGLMIRLKERALFASGSAALQGDAERIVPVIAGVLSSLPERVTISGHTDN 174
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGI------SASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ + + A + + + +R Y + P E+ A+
Sbjct: 175 VPIATAQYPSNWELSSARAVSLMRGVMAVQPSLNPARFSALGYSEYRPIASNDTEEGRAQ 234
Query: 146 NRRAIVFL 153
NRR VF+
Sbjct: 235 NRRVEVFI 242
>gi|269961586|ref|ZP_06175948.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269833627|gb|EEZ87724.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 318
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 42/101 (41%), Gaps = 1/101 (0%)
Query: 54 FDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F +S +++P L + + E + + G+ D G + + +RA +V N
Sbjct: 209 FALNSTTLKPESAAKLDDLVAFLNEYPQANVDVIGYTDTSGPAAYNQKVSEKRAESVANA 268
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V +GI A R+ G+ P + +NRR V +
Sbjct: 269 LVEKGIDADRIHARGEGENNPIASNETREGREQNRRVEVVV 309
>gi|239817427|ref|YP_002946337.1| peptidoglycan-associated lipoprotein [Variovorax paradoxus S110]
gi|239804004|gb|ACS21071.1| peptidoglycan-associated lipoprotein [Variovorax paradoxus S110]
Length = 168
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 66/165 (40%), Gaps = 14/165 (8%)
Query: 1 MQYST----IFIILSAITMMSISGIDNLD---------TKISSPDTVLNESSLQEQFSSS 47
M+ S+ I I++ ++ G + ++P + +
Sbjct: 1 MKNSSSSYRILAIVALAASLAACGTAATSGREDATYYYSNKAAPVAKVEPPPPAPVQNGP 60
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRA 106
V+FD Y ++P V+ S+L +IEGH D G R ++ALG RRA
Sbjct: 61 ALKIVYFDFDKYDVKPQYRNVVEAHASYLRNRPASKVVIEGHTDLRGGREYNLALGQRRA 120
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+V G+ R++ S+G E P+ E+ + NRRA
Sbjct: 121 ESVQRALTQLGVPGERIEAVSWGIEKPASLETTEEGHQLNRRAEF 165
>gi|163855060|ref|YP_001629358.1| putative lipoprotein [Bordetella petrii DSM 12804]
gi|163258788|emb|CAP41087.1| putative lipoprotein [Bordetella petrii]
Length = 215
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 58/137 (42%), Gaps = 2/137 (1%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQ-FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-L 76
SG+ + + ++ + + ++ +V FDT ++PA + VL ++
Sbjct: 74 SGVKKDVQQSGASSLGIDVVEMPDGSLKVNIPSNVSFDTDKAVLKPALLPVLDSVARALN 133
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ + + GH D GS + L RA +V +Y +G++ +RM + P
Sbjct: 134 QHPELRAKVVGHTDSTGSAAHNQTLSENRARSVTDYLGKQGVAPARMTIEGRAARDPIGD 193
Query: 137 GHDEDAYAKNRRAIVFL 153
+ A NRR V+L
Sbjct: 194 NATAEGRAANRRVEVYL 210
>gi|317009738|gb|ADU80318.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
India7]
Length = 179
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/177 (20%), Positives = 71/177 (40%), Gaps = 24/177 (13%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSS-------------- 46
M+ S+ F L A +++ + ++ + +
Sbjct: 1 MKRSSAFSFLVAFLLVAGCSHKMDNKTVAGDVSAKTVQTAPVTTEPAPEKEEPKEEPAPV 60
Query: 47 ----------SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRN 96
++ S++FD Y I+ +D + L + +++ L+EG+ DE GS
Sbjct: 61 VEEKPAIESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEFGSSE 120
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ ALG++R +V N V +G+ +K S+G+ P + Y +NRR V L
Sbjct: 121 YNQALGVKRTLSVKNALVIKGVEKDMIKTISFGETKPKCAQKTRECYKENRRVDVKL 177
>gi|307720703|ref|YP_003891843.1| OmpA/MotB domain-containing protein [Sulfurimonas autotrophica DSM
16294]
gi|306978796|gb|ADN08831.1| OmpA/MotB domain protein [Sulfurimonas autotrophica DSM 16294]
Length = 180
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/178 (24%), Positives = 71/178 (39%), Gaps = 25/178 (14%)
Query: 1 MQYSTIFIILSAITMMSISGI-----DNLDTKISSPDTVLNESSLQEQFSSSVGDS---- 51
M+ + +++A+ + S +++SP E+ E +S
Sbjct: 1 MKSIVLSSVVTALLVFSGCSTKEPAVQKKTEEVASPVVQEVEAVTTETVASENSTINSST 60
Query: 52 --------------VFFDTSSYSIRPADIQVLSNLGSWLEK--HDCDFLIEGHADELGSR 95
++FD Y+I+P + + + +EG+ DE GS
Sbjct: 61 NELSMNAIESKLPTIYFDFDKYNIKPEMQERIDAAAELGKTGAKAFSVKLEGNCDEWGSD 120
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ ALGL+RA AV VA GI SR+ + SYG+ P H +AKNRR L
Sbjct: 121 EYNFALGLKRANAVKKALVADGIDPSRISMVSYGESNPVCTEHTRACWAKNRRVNFKL 178
>gi|114046351|ref|YP_736901.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-7]
gi|113887793|gb|ABI41844.1| OmpA/MotB domain protein [Shewanella sp. MR-7]
Length = 514
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 43/108 (39%), Gaps = 1/108 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
D + F + S Q L L + + + LI GH D GS + + L RA V
Sbjct: 146 DEMMFGSGSAEATAQAKQKLQKLAAIYKDSKQNILITGHTDASGSESLNQTLSEARARYV 205
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF-LKGC 156
F GI R+ G+ P +E AKNRR + ++G
Sbjct: 206 ATLFNQAGIPTERLFFQGAGESQPVAANTNETGKAKNRRVEIVEIEGK 253
>gi|293608672|ref|ZP_06690975.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292829245|gb|EFF87607.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 473
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 59/148 (39%), Gaps = 6/148 (4%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSV-----GDSVFFDTSSYSIRPADI 66
++ + ++ +++ T L +++ + F + S I +
Sbjct: 324 VVSTAPETAEQSVSNSLTASQTALGSIDPNNVDVNALVKALNLQIINFASGSSDIPADNK 383
Query: 67 QVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
+L + + + GH D G+ ++ AL RRA AV +Y +++G+ +++
Sbjct: 384 AILDQAATLLNKVSGVKLNVGGHTDSTGNAAANKALSQRRAQAVVDYLISKGVDGTKLVA 443
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+G + P E+ KNRR +
Sbjct: 444 QGHGSDQPVAENTTEEGRFKNRRIEFSV 471
>gi|148380179|ref|YP_001254720.1| chemotaxis MotB protein [Clostridium botulinum A str. ATCC 3502]
gi|153932823|ref|YP_001384478.1| chemotaxis MotB protein [Clostridium botulinum A str. ATCC 19397]
gi|153937092|ref|YP_001387994.1| chemotaxis MotB protein [Clostridium botulinum A str. Hall]
gi|148289663|emb|CAL83767.1| putative chemotaxis MotB protein [Clostridium botulinum A str. ATCC
3502]
gi|152928867|gb|ABS34367.1| putative chemotaxis MotB protein [Clostridium botulinum A str. ATCC
19397]
gi|152933006|gb|ABS38505.1| putative chemotaxis MotB protein [Clostridium botulinum A str.
Hall]
Length = 254
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 47/118 (39%), Gaps = 5/118 (4%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RN 96
+ + D V F++ + +L+ + L+ D + + GH D
Sbjct: 117 ADGLEIDIQDVVLFNSGDAEVLKQSSALLTQISKMLKGLDNNIKVTGHTDNQPISNSKFR 176
Query: 97 SSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA V N+ G +++ + +YG+ MP E AKNRR + +
Sbjct: 177 SNWDLSAIRAINVMNFLSNIGGIPANKLSIQAYGEYMPKFDNVTEAGRAKNRRVEISI 234
>gi|328958273|ref|YP_004375659.1| uncharacterized protein YtxE [Carnobacterium sp. 17-4]
gi|328674597|gb|AEB30643.1| uncharacterized protein YtxE [Carnobacterium sp. 17-4]
Length = 205
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 55/132 (41%), Gaps = 5/132 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ + + Q+ ++ +S+ F + S I + L+ L +++ + D ++E
Sbjct: 67 EANEMTAQASVEYDQDGIYVNIQESILFGSGSAIIAESGESTLNGLSDLIQQFENDVVVE 126
Query: 87 GHAD----ELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDED 141
G+ D +S+ L RA +V Y R + +R+ YG+ P E+
Sbjct: 127 GYTDDVPMNNSIFSSNWELSTGRALSVLRYLSEERSVDPTRLSAKGYGEYHPISPNDSEE 186
Query: 142 AYAKNRRAIVFL 153
KNRR + L
Sbjct: 187 NKEKNRRVNIVL 198
>gi|301063232|ref|ZP_07203781.1| OmpA family protein [delta proteobacterium NaphS2]
gi|300442660|gb|EFK06876.1| OmpA family protein [delta proteobacterium NaphS2]
Length = 214
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 4/127 (3%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIE 86
DT ++ +++ V + FD +SY+IRP +L LG L +I
Sbjct: 84 GVDTWETVNAPEKRTGGFVNLKIEFDVNSYTIRPESYNLLRELGKALADPRLRDRIIIIN 143
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVYGHDEDAYAK 145
GH D G ++ L L RA AV Y + R++V YG+ MP ++
Sbjct: 144 GHTDSDGKEKYNVRLSLDRAAAVKTYLIDHCGVAPDRLEVVGYGESMPLTPNTSKENKQL 203
Query: 146 NRRAIVF 152
NRR +
Sbjct: 204 NRRVEIV 210
>gi|299535178|ref|ZP_07048502.1| chemotaxis protein motB [Lysinibacillus fusiformis ZC1]
gi|298729299|gb|EFI69850.1| chemotaxis protein motB [Lysinibacillus fusiformis ZC1]
Length = 250
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 48/134 (35%), Gaps = 6/134 (4%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLI 85
++ + E ++ DS+ FD +++P + + L + LE +I
Sbjct: 107 AVNEMEDQFATEMTDEGLLVTIRDSILFDPGQATVKPEYVPIAKELSTMLESDPARNIVI 166
Query: 86 EGHADELG---SRNSSIALGLRRAYAVFNYFVARGI--SASRMKVTSYGKEMPSVYGHDE 140
GH D + + S+ L + RA + +R G+
Sbjct: 167 TGHTDNVPAGPNFTSNFQLSVMRATKFLELLIESNDKLDPTRFSAKGNGEYRAIAPNDTA 226
Query: 141 DAYAKNRRAIVFLK 154
+ AKNRR V ++
Sbjct: 227 EGRAKNRRVEVLIQ 240
>gi|171315988|ref|ZP_02905216.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
gi|171098892|gb|EDT43683.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
Length = 592
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 48/124 (38%), Gaps = 2/124 (1%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPAD-IQVLSNLGSWLEKHDCDFLIEGHAD 90
E ++ FD+ +R ++ L D L+ G+AD
Sbjct: 454 AIASYEPPPPPPAVVTLDSMSLFDSGKARLRTGTTRAMVDALELIKAHPDKRVLVAGYAD 513
Query: 91 ELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
+ G + ++ L + RA AV ++ A GI +R + YG P + AKNRR
Sbjct: 514 DQGRPDRNLKLSIDRASAVRDWLVEASGIPPTRFAIQGYGDTRPVADNATPEGRAKNRRV 573
Query: 150 IVFL 153
+ L
Sbjct: 574 EITL 577
>gi|119383378|ref|YP_914434.1| OmpA/MotB domain-containing protein [Paracoccus denitrificans
PD1222]
gi|119373145|gb|ABL68738.1| OmpA/MotB domain protein [Paracoccus denitrificans PD1222]
Length = 768
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 39/117 (33%), Gaps = 1/117 (0%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRN 96
+ ++ + F+ + I L L ++ D I GH D GS
Sbjct: 497 ECVDRLNAAMQQSEIGFEPNKSVIAGDPGPTLERLAETMKLCADFRIEIGGHTDSQGSEG 556
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA AV A GI + M YG+ P + NRR L
Sbjct: 557 FNAELSRARAQAVLAAMTAAGIDTANMTAKGYGESQPIADNDTDAGREANRRIEFLL 613
>gi|330880603|gb|EGH14752.1| flagellar motor protein MotD [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 262
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 42/115 (36%), Gaps = 4/115 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ S+ F + ++ + +++ D +EG D+ ++
Sbjct: 97 IEIELNSSLLFVSGDAIPSDKAFTIIEKVSGIVKRFDNPIHVEGFTDDQPISTAQFPTNW 156
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L R+ ++ G++ +R+ YG+ P AKNRR ++ +
Sbjct: 157 ELSSARSASIVRMLAMDGVNPARLASVGYGEFQPIAPNTTAAGRAKNRRVVLVIS 211
>gi|54309669|ref|YP_130689.1| outer membrane protein [Photobacterium profundum SS9]
gi|46914107|emb|CAG20887.1| conserved hypothetical outer membrane protein [Photobacterium
profundum SS9]
Length = 220
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 61/142 (42%), Gaps = 3/142 (2%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS 70
+ + + + +GID+ + + +++ + Q++ + V+F S + P VL
Sbjct: 81 ALLALTAETGIDSKCWEYLNTADLVSTTGAQDEKLIA---RVYFAFDSQRLTPESQTVLK 137
Query: 71 NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
+ L + GH D +GS+ + LGL+RA + Y + + + +K +YG+
Sbjct: 138 AIARKLTNSQQTVSLAGHTDSVGSQGYNYTLGLQRAKSSMQYLIDNEVKDTNLKSKTYGE 197
Query: 131 EMPSVYGHDEDAYAKNRRAIVF 152
P A NRR V
Sbjct: 198 TQPIESNTTSQGRAMNRRVDVV 219
>gi|94311606|ref|YP_584816.1| OmpA/MotB [Cupriavidus metallidurans CH34]
gi|93355458|gb|ABF09547.1| peptidoglycan-associated outer membrane lipoprotein [Cupriavidus
metallidurans CH34]
Length = 169
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 1/140 (0%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
S +G + ++ L + SV+FD SYS++ +L
Sbjct: 29 ASKSGAGTGATTDARNVAPVDVSRDPLNDPNGPLAKRSVYFDFDSYSVKQDYQGMLQAHS 88
Query: 74 SW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
+ LI+G+ DE G+ ++ALG +RA AV A G+ S+M+ S GKE
Sbjct: 89 QYLGSNKSRKILIQGNTDERGTSEYNLALGQKRAEAVRRSLAAMGVPDSQMEAVSLGKEK 148
Query: 133 PSVYGHDEDAYAKNRRAIVF 152
P GHD+ ++A+NRRA +
Sbjct: 149 PKATGHDDASWAENRRADIV 168
>gi|311104068|ref|YP_003976921.1| inner membrane lipoprotein YiaD [Achromobacter xylosoxidans A8]
gi|310758757|gb|ADP14206.1| inner membrane lipoprotein YiaD [Achromobacter xylosoxidans A8]
Length = 215
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 56/133 (42%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
+++ +S + ++ V FDT ++PA + VL ++ + +
Sbjct: 78 EDVQKSGASSLGIDVVEMPDGSLKVNIPSGVSFDTDKTQLKPALLPVLDSVARSLNQHPE 137
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ GH D G+ + L + RA +V +Y +G++A R+ V G P
Sbjct: 138 LRAKVVGHTDSTGALAHNQTLSVNRAKSVTDYLGKQGVAAGRLTVEGRGPNDPIGDNATA 197
Query: 141 DAYAKNRRAIVFL 153
+ A NRR ++L
Sbjct: 198 EGRALNRRVEIYL 210
>gi|34556944|ref|NP_906759.1| lipoprotein precursor [Wolinella succinogenes DSM 1740]
gi|34482659|emb|CAE09659.1| LIPOPROTEIN PRECURSOR [Wolinella succinogenes]
Length = 170
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 80/168 (47%), Gaps = 15/168 (8%)
Query: 1 MQYSTIFIILSAITMMSISG------IDNLDTKISSPDTVLNESSLQEQFSSSVGD---- 50
M+ + L+A+ +M+ D+ D+K+S + + S + S+ + +
Sbjct: 1 MKKFLVIGSLAAVMLMTGCSQKGSAVSDSADSKVSGMTSGKDNFSDMDAKSALIRELESQ 60
Query: 51 --SVFFDTSSYSIRPADIQVLS---NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRR 105
SV+FD ++IR V+ + + + IEG+ DE G+ + ALGL+R
Sbjct: 61 LKSVYFDFDKFNIRADMQPVVDGDAKVLTSAKAKGLTVKIEGNTDEWGTDEYNYALGLKR 120
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
A AV + VA+G+ S+ + SYG+ P ++ +AKNRR L
Sbjct: 121 AVAVRDALVAKGVDQSKTMLISYGESKPVCQEKSKECWAKNRRVDFKL 168
>gi|238757311|ref|ZP_04618497.1| Inner membrane lipoprotein yiaD [Yersinia aldovae ATCC 35236]
gi|238704350|gb|EEP96881.1| Inner membrane lipoprotein yiaD [Yersinia aldovae ATCC 35236]
Length = 226
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 64/124 (51%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FDT S +++PA L+ + L+++D + G+ D
Sbjct: 101 GTGVSVTRQGDNIVLNMPNNVTFDTDSSNLKPAGANTLTGVAMVLKEYDKTAVNVTGYTD 160
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G+R ++ L +RA +V + + +G++A+R++ + G + P A+NRR
Sbjct: 161 STGARAHNMTLSQQRADSVGSTLIVQGVAANRIRTSGAGPDNPVATNSTAAGKAQNRRVE 220
Query: 151 VFLK 154
+ L
Sbjct: 221 ITLS 224
>gi|154508361|ref|ZP_02044003.1| hypothetical protein ACTODO_00858 [Actinomyces odontolyticus ATCC
17982]
gi|153797995|gb|EDN80415.1| hypothetical protein ACTODO_00858 [Actinomyces odontolyticus ATCC
17982]
Length = 177
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 50/126 (39%), Gaps = 2/126 (1%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG-SWLEKHDCDFLI 85
+S+ D + + + +++ V F+ S + +VL +L W + +
Sbjct: 49 SVSTIDGAVATAEQPDATVTTLSGDVNFEVDSDQLTARAKEVLDSLASEWTKAKPSTVSV 108
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
GH D + ++ L RRA AV +Y + + G+ P ++ A+
Sbjct: 109 MGHTDSVADDAHNLDLSKRRAKAVGDYLKGKVP-GLSITTDGKGEAEPIGDNETDEGRAQ 167
Query: 146 NRRAIV 151
NRR +
Sbjct: 168 NRRVEI 173
>gi|172058884|ref|YP_001815344.1| OmpA/MotB domain-containing protein [Exiguobacterium sibiricum
255-15]
gi|171991405|gb|ACB62327.1| OmpA/MotB domain protein [Exiguobacterium sibiricum 255-15]
Length = 257
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 46/134 (34%), Gaps = 6/134 (4%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLI 85
K + + E ++ D F + ++ IQ+ + + ++ +
Sbjct: 106 KQQKLEKDIKVEVTNEGLVFNIRDRALFSPAQADVKGDAIQIAQGMSNLLVKAGQRQIQV 165
Query: 86 EGHADELGS----RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDE 140
GH D + S+ L RA + + R V+ YG+ P E
Sbjct: 166 SGHTDNIPINTVQYPSNWELSAERAISFMRALQRNPKLTPKRFTVSGYGEYQPIASNDTE 225
Query: 141 DAYAKNRRAIVFLK 154
++NRR V ++
Sbjct: 226 SGRSQNRRVEVLIR 239
>gi|304407655|ref|ZP_07389306.1| OmpA/MotB domain protein [Paenibacillus curdlanolyticus YK9]
gi|304343138|gb|EFM08981.1| OmpA/MotB domain protein [Paenibacillus curdlanolyticus YK9]
Length = 263
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 6/123 (4%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS-- 94
++ ++ S + D FD ++ A +L L S K D IEGH D L
Sbjct: 128 VTNEEQGVSIRLSDQFLFDLGKADLKKAARPILDKLSSLFVKLDHPISIEGHTDNLPIQP 187
Query: 95 ---RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
+ AL R+ +V YF + ++ ++ YG P + ++NRR
Sbjct: 188 GGEFRDNWALSAGRSLSVLRYFTEIAQLEPTKFQIAGYGDTRPIAPNTTDANRSRNRRVE 247
Query: 151 VFL 153
+ +
Sbjct: 248 ITI 250
>gi|186470894|ref|YP_001862212.1| type VI secretion system OmpA/MotB family protein [Burkholderia
phymatum STM815]
gi|184197203|gb|ACC75166.1| type VI secretion system OmpA/MotB family protein [Burkholderia
phymatum STM815]
Length = 447
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 44/127 (34%), Gaps = 4/127 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
++ S + F S++ +++ + + + + + G+ D
Sbjct: 315 AAGTVSVDEDAHHSSVTFRGDSMFPPGGASVKATMGPLIAKIAAEIARVPGKVSVLGYTD 374
Query: 91 ELGSRNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ R+ A L RA V A G+ ASR++ G P A+N
Sbjct: 375 NVPIRSRQFASNDALSEERATQVMQILQAAGVPASRLEAVGKGDADPVADNSTPQGRAQN 434
Query: 147 RRAIVFL 153
RR + +
Sbjct: 435 RRVEITV 441
>gi|117617688|ref|YP_858093.1| peptidoglycan-associated lipoprotein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|330828308|ref|YP_004391260.1| peptidoglycan-associated lipoprotein [Aeromonas veronii B565]
gi|117559095|gb|ABK36043.1| peptidoglycan-associated lipoprotein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|328803444|gb|AEB48643.1| Peptidoglycan-associated lipoprotein [Aeromonas veronii B565]
Length = 174
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 1/134 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
G+ + T ++ E Q+ + + ++F Y I+ +L S+ E+
Sbjct: 40 GMGGVQTGGANGMLSPEEQMRQKFEALQRDNVIYFPFDGYDIQGQYADLLDAHASYLRER 99
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
LIEGHADE G+ +IALG RRA AV Y G+ A ++ + SYG+E P H
Sbjct: 100 PSVKVLIEGHADERGTPEYNIALGERRAKAVAKYLQTLGVQAEQLSIVSYGEEKPLDMSH 159
Query: 139 DEDAYAKNRRAIVF 152
EDA+AKNRRA++
Sbjct: 160 TEDAFAKNRRAVLV 173
>gi|317402399|gb|EFV82971.1| OmpA family protein [Achromobacter xylosoxidans C54]
Length = 232
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 60/138 (43%), Gaps = 1/138 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
D++ ++ + ++ +V FDT ++PA + VL ++ + +
Sbjct: 95 DDVQRSGATSLGIDVVEMPDGSLKVNIPSNVSFDTDKTDLKPALLPVLDSVARSLNQHPE 154
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ GH D G+ + L + RA +V +Y +G++A+R+ V G P
Sbjct: 155 LRAKVVGHTDSTGALAHNQTLSVNRARSVTDYLSRQGVAATRLSVEGRGPSDPIGDNATA 214
Query: 141 DAYAKNRRAIVFLKGCRA 158
+ A NRR V+L ++
Sbjct: 215 EGRALNRRVEVYLYAVKS 232
>gi|293393749|ref|ZP_06638056.1| OmpA family protein [Serratia odorifera DSM 4582]
gi|291423576|gb|EFE96798.1| OmpA family protein [Serratia odorifera DSM 4582]
Length = 220
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FDT S +++PA L+ + L+++ + G+ D
Sbjct: 94 GTGVSVTRQGDNIVLNMPNNVTFDTDSSTLKPAGANTLTGVAMVLKEYPKTAVNVVGYTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G+R ++ L +RA V + + +G++A+R++ G + P + A+NRR
Sbjct: 154 STGARAHNMTLSQQRADGVASALITQGVAANRIRTQGAGPDNPIASNSTTEGKAQNRRVE 213
Query: 151 VFLK 154
+ L
Sbjct: 214 ITLS 217
>gi|289209442|ref|YP_003461508.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
gi|288945073|gb|ADC72772.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
Length = 221
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ + FD I+P +VL+++ L ++D + GH D
Sbjct: 93 GTGVSVTRDGDNIILNMPGHITFDIDRTDIKPEFEEVLNSVALVLAEYDQTGIEVAGHTD 152
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G ++ L RRA +V + RG+ + R+ +G P + A NRR
Sbjct: 153 ITGRVEYNMDLSERRAQSVGRALIRRGVQSVRVDTVGFGPHQPIATNETAEGRALNRRVE 212
Query: 151 VFL 153
+ L
Sbjct: 213 LTL 215
>gi|153949077|ref|YP_001403078.1| outer membrane lipoprotein [Yersinia pseudotuberculosis IP 31758]
gi|152960572|gb|ABS48033.1| OmpA family protein [Yersinia pseudotuberculosis IP 31758]
Length = 219
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + E ++ ++V FDT+S +++PA L+ + L+++D + G+ D
Sbjct: 94 GTGVSVTRQGENIVLNMPNNVTFDTNSSNLKPAGANTLTGVAMVLKEYDKTAVNVTGYTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G+R +I L +RA V + + +G++A+R++ G + P A+NRR
Sbjct: 154 STGARAHNIVLSQQRADNVASALIVQGVAANRIRTYGAGPDNPVASNSTAAGKAQNRRVE 213
Query: 151 VFLK 154
+ L
Sbjct: 214 ITLS 217
>gi|332308557|ref|YP_004436408.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332175886|gb|AEE25140.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 215
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 50/124 (40%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG-SWLEKHDCDFLIEGHA 89
D+ + + + S+ F + + S+ + VL ++ + ++EGH
Sbjct: 86 ADSGVEVYREGDVLRLYMPGSITFSSGNASVDSSFFPVLKDVALVINKYEKTTLMVEGHT 145
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G+ + + L RA +V NY V G+ R+ G+ P + KNRR
Sbjct: 146 DNTGADDMNQRLSEARANSVKNYLVQNGVDNRRVSTLGMGEYTPIADNTTQAGRQKNRRV 205
Query: 150 IVFL 153
+ +
Sbjct: 206 ELKI 209
>gi|329904214|ref|ZP_08273697.1| peptidoglycan-associated lipoprotein [Oxalobacteraceae bacterium
IMCC9480]
gi|327548110|gb|EGF32831.1| peptidoglycan-associated lipoprotein [Oxalobacteraceae bacterium
IMCC9480]
Length = 174
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 20/171 (11%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKI-------------------SSPDTVLNESSLQE 42
ST ++ +++ + S LD K +P + L +
Sbjct: 3 NLSTFAVVAASVLLFSACSSTKLDEKPPVEDRSGSAAMAAPADTRTVNPVNAGSTDPLND 62
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIAL 101
SV+FD SY ++ VL + +I+G+ D+ G R ++AL
Sbjct: 63 PQGVLAKRSVYFDYDSYVVKAEFKSVLEAHARYLSANKSRKIIIQGNTDDRGGREYNLAL 122
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
G +R+ AV G++ ++++ S GKE P G DE AYA+NRRA +
Sbjct: 123 GQKRSEAVRQAMSLMGVADNQLEAVSLGKEKPKATGSDEAAYAENRRADIV 173
>gi|218133672|ref|ZP_03462476.1| hypothetical protein BACPEC_01541 [Bacteroides pectinophilus ATCC
43243]
gi|217991047|gb|EEC57053.1| hypothetical protein BACPEC_01541 [Bacteroides pectinophilus ATCC
43243]
Length = 266
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 53/128 (41%), Gaps = 6/128 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+ + + ++ + FD+ ++ + +L + S E +D IEGH D
Sbjct: 134 SDDVEVKATSKYVMLNLNSGILFDSGKSELKTEAVTLLDKVSSILWEYNDNMIAIEGHTD 193
Query: 91 ELGSRNSSIA----LGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
NS L L RAY+VF Y +G AS M T G+ +P + A+
Sbjct: 194 NNPIHNSKYPDNTMLSLYRAYSVFTYLTDQKGFDASTMLATGRGESVPIASNATAEGRAQ 253
Query: 146 NRRAIVFL 153
NRR + +
Sbjct: 254 NRRVEIKI 261
>gi|167588145|ref|ZP_02380533.1| OmpA/MotB [Burkholderia ubonensis Bu]
Length = 592
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 50/129 (38%), Gaps = 2/129 (1%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPAD-IQVLSNLGSWLEKHDCDFLI 85
+ E ++ FD+ +++P ++ L L+
Sbjct: 449 SPLNDAIASYEPPSPPPSVVTLDSMSLFDSGKAALKPDSTRAMVGALELIKAHPGKRILV 508
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
GH D +G + ++ L + RA AV ++ A GI+ ++ + YG P + A
Sbjct: 509 AGHTDAVGKPDRNLKLSVDRAAAVRDWLVDASGIAPTQFAIQGYGDTRPVADNATPEGRA 568
Query: 145 KNRRAIVFL 153
+NRR + L
Sbjct: 569 RNRRVEITL 577
>gi|322806981|emb|CBZ04551.1| flagellar motor rotation protein MotB [Clostridium botulinum H04402
065]
Length = 247
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 50/126 (39%), Gaps = 5/126 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ + + D+V F+ I+P Q++ + + + +IEGH D +
Sbjct: 112 SSVEVKEDGRGIIIQLRDNVLFEIGRADIKPQSKQIMDKINGLIATLPNEVIIEGHTDNV 171
Query: 93 GS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
S+ L RA V YFV + + +R YG+ P + + AKNR
Sbjct: 172 PIKNEVYGSNWELSTARAVNVLRYFVETKKQNPARFTAAGYGEYRPIAQNNSDANRAKNR 231
Query: 148 RAIVFL 153
R + +
Sbjct: 232 RVNIVI 237
>gi|262369227|ref|ZP_06062555.1| outer membrane protein A [Acinetobacter johnsonii SH046]
gi|262315295|gb|EEY96334.1| outer membrane protein A [Acinetobacter johnsonii SH046]
Length = 348
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
VFFDT+ +I+ ++ + +E + IEGH D G R + L L RA +V
Sbjct: 235 RVFFDTNKSNIKDQYKPEIAKVAEKLVEYPNATARIEGHTDNTGPRALNERLSLARANSV 294
Query: 110 FNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
+ V + +R+ + + P + ++ A NRR + G R
Sbjct: 295 KSSLVNEYNVDPARLSTQGFAWDQPIADNNTKEGRAMNRRVFATISGSR 343
>gi|261342034|ref|ZP_05969892.1| OmpA family protein [Enterobacter cancerogenus ATCC 35316]
gi|288315690|gb|EFC54628.1| OmpA family protein [Enterobacter cancerogenus ATCC 35316]
Length = 161
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/159 (18%), Positives = 57/159 (35%), Gaps = 5/159 (3%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNE---SSLQEQFSSSVGDSVFFDTS 57
M + + A +++ + + + L +S + D + FD +
Sbjct: 1 MLKRYLAPLFMASLVLAGCQAPPKGKFTAEQIAAMQSYGFNELNGDWSLGLSDKILFDKN 60
Query: 58 SYSIRPADIQVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
+RP + + S L + ++GH D G + + AL L+RA AV + +
Sbjct: 61 DARLRPESETQIRTMASRLAATGLNHARMDGHTDNYGEESYNEALSLKRANAVADAWAKG 120
Query: 117 GISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ GK+ P A+NRR V +
Sbjct: 121 ANIPRGNLTTQGLGKKYPVASNSTPQGRAENRRVAVVIS 159
>gi|149190355|ref|ZP_01868628.1| outer membrane protein [Vibrio shilonii AK1]
gi|148835844|gb|EDL52808.1| outer membrane protein [Vibrio shilonii AK1]
Length = 219
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 52/123 (42%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
V E Q + + + FD++S+++ + L + +E + +IEG+ D
Sbjct: 93 SGVQVERVGDNQLLLRLENGIGFDSNSHALNSSIHNTLRGVARILVEYPNTSLVIEGYTD 152
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + L +RA V ++ +++ ++A R G+ P + NRR
Sbjct: 153 STGSAQYNQELSEKRAEQVRSFLISQNVAAGRAVARGNGERFPICSNSTPEGRQCNRRVE 212
Query: 151 VFL 153
+ +
Sbjct: 213 IKI 215
>gi|88705660|ref|ZP_01103370.1| outer membrane protein; OprF [Congregibacter litoralis KT71]
gi|88700173|gb|EAQ97282.1| outer membrane protein; OprF [Congregibacter litoralis KT71]
Length = 247
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 54/136 (39%), Gaps = 3/136 (2%)
Query: 22 DNLDTKISSPDTVLNES--SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEK 78
D D ++P+ V ++ + D + FD S ++ L +
Sbjct: 112 DYKDQCANTPEGVKVDATGCPIKDEVVLTVDRLSFDFDSAALDAQSRAALDAAVAVIKSH 171
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ G+ D G ++ L RRA A +Y V++G+ A +++ T G+ P
Sbjct: 172 SSVKMDVVGYTDTSGPEEYNLGLSKRRAQAAVDYLVSQGVDADQLRATGRGEADPVASND 231
Query: 139 DEDAYAKNRRAIVFLK 154
D +NRR + ++
Sbjct: 232 TRDGRERNRRVELVVR 247
>gi|325953789|ref|YP_004237449.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
gi|323436407|gb|ADX66871.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
Length = 337
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 54/145 (37%), Gaps = 7/145 (4%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDS------VFFDTSSYSIRPADIQV 68
+ + SG+ ++ +Q + D + FDT +++ +
Sbjct: 190 LSATSGVGKINILQKEGFKQTISMLKADQIQKDLNDKGKAVLHINFDTDKATLKADGKEA 249
Query: 69 LSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
++ + L I G+ D G ++ L +RA V + GI +R+
Sbjct: 250 VAEITKALNTDKMLKISINGYTDNTGDEKHNLDLSKQRAETVKKELIKSGIDVNRLSSEG 309
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVF 152
+G+ P + E+ ++NRR +
Sbjct: 310 FGQNNPIADNNTEEGKSQNRRVELI 334
>gi|332668211|ref|YP_004450999.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332337025|gb|AEE54126.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 317
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/150 (20%), Positives = 55/150 (36%), Gaps = 6/150 (4%)
Query: 11 SAITMMSISGIDNL----DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADI 66
+ +M + D D K + E + V F+T + A
Sbjct: 167 MGLVLMYKTPEDKAFKPFDFKPMEDEAKRYIQQDGEGIKIRFSEKVSFETGKSELVAAAD 226
Query: 67 QVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR-GISASRMK 124
+L+ L + IEGH D++G+ ++ L RA AV R ++ +++
Sbjct: 227 SILAITVRMLNYNPEAKCRIEGHTDDVGNAKDNLLLSQSRAKAVATALKNRGIPTSVQLE 286
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
V YG P + + NRR + ++
Sbjct: 287 VKGYGSTKPVASNSSAEGKSLNRRVDIVIE 316
>gi|254246487|ref|ZP_04939808.1| OmpA/MotB [Burkholderia cenocepacia PC184]
gi|124871263|gb|EAY62979.1| OmpA/MotB [Burkholderia cenocepacia PC184]
Length = 316
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++ F+T S ++ P +L + + + + I GH D G+R S+IAL RA
Sbjct: 209 NRTIEFETGSATLTPQGKLILDQMAAALAKMQNRTVDIIGHTDNSGNRTSNIALSQARAD 268
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV Y + + I +M T G + P D A+NRR +
Sbjct: 269 AVKGYLITKNIPPQQMTTTGVGPDQPIAPNDTADGRARNRRIEFRV 314
>gi|239929192|ref|ZP_04686145.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
Length = 195
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 22/140 (15%), Positives = 44/140 (31%), Gaps = 2/140 (1%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
++ + ++ + ++ V F S + ++ +
Sbjct: 48 ATLAEPKVLDIKQVVEDQSGDERREDTNSDVKFALQAEVLFGKDSAKLGAQAKARIATIA 107
Query: 74 SWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKE 131
++ + + G D LGS L +RA AV + +V YG++
Sbjct: 108 EEIKTQNATRIRVFGFTDNLGSSAHGDVLSRQRANAVHGVLEQELNDSDVTYEVRGYGEQ 167
Query: 132 MPSVYGHDEDAYAKNRRAIV 151
P E KNRR +
Sbjct: 168 YPIADNSTEAGRKKNRRVEI 187
>gi|170731810|ref|YP_001763757.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
MC0-3]
gi|169815052|gb|ACA89635.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3]
Length = 316
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++ F+T S ++ P +L + + + + I GH D G+R S+IAL RA
Sbjct: 209 NRTIEFETGSATLTPQGKLILDQMAAALAKMQNRTVDIIGHTDNSGNRTSNIALSQARAD 268
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV Y + + I +M T G + P D A+NRR +
Sbjct: 269 AVKGYLITKNIPPQQMTTTGVGPDQPIAPNDTADGRARNRRIEFRV 314
>gi|29829787|ref|NP_824421.1| secreted protein [Streptomyces avermitilis MA-4680]
gi|29606896|dbj|BAC70956.1| putative secreted protein [Streptomyces avermitilis MA-4680]
Length = 226
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 55/147 (37%), Gaps = 2/147 (1%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQ 67
+ L+ ++ + + ++ + + + ++ V F S + P
Sbjct: 64 LKLADGATLAPAKVLDIKSVVEDLGGEERREDTNADVTFALQAEVLFPKDSPKLNPEARS 123
Query: 68 VLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKV 125
++ + ++K + + + G D LGS + L +RA AV + A G +V
Sbjct: 124 RINAIADEIKKQNATNVRVFGFTDNLGSYAHGLTLSKKRAEAVHDQLASALGSQDVTFEV 183
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVF 152
Y ++ P E KNRR V
Sbjct: 184 RGYSEDYPIADNTSEQGRRKNRRVEVT 210
>gi|30314450|gb|AAP15434.1| outer membrane lipoprotein precursor [Burkholderia cepacia]
Length = 150
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 66/128 (51%), Gaps = 1/128 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FL 84
+ +N L + S S++FD SYS++ ++ +L+ H L
Sbjct: 20 QPSADNVAQVNVDPLNDPNSPLAKRSIYFDFDSYSVKDEYQPLMQQHAQYLKSHPQRHVL 79
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
I+G+ DE G+ ++ALG +RA AV G++ S+M+ S GKE P GHDE ++A
Sbjct: 80 IQGNTDERGTSEYNLALGQKRAEAVRRAMALLGVNDSQMEAVSLGKEKPQATGHDEASWA 139
Query: 145 KNRRAIVF 152
+NRRA +
Sbjct: 140 QNRRADLV 147
>gi|152979448|ref|YP_001345077.1| peptidoglycan-associated lipoprotein [Actinobacillus succinogenes
130Z]
gi|150841171|gb|ABR75142.1| Peptidoglycan-associated lipoprotein [Actinobacillus succinogenes
130Z]
Length = 152
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 3/152 (1%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ + + ++ + + + S DN + + + ++V+F Y
Sbjct: 1 MKLAKLLLVAPVLALAACSSSDNDASATDGANAAQQFGGYSVEDLQQRYNTVYFAFDRYD 60
Query: 61 IRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
I Q+L + L+EG+ADE G+ +IALG RRA AV NY A+
Sbjct: 61 IEGEYQQLLDAHAAYLTATPAAKVLVEGNADERGTPEYNIALGQRRADAVKNYLSAK--G 118
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
A+ + SYG+E P+V GHDE AYAKNRRA++
Sbjct: 119 ANNISTVSYGEEKPAVLGHDEAAYAKNRRAVL 150
>gi|289664228|ref|ZP_06485809.1| OmpA family outer membrane protein [Xanthomonas campestris pv.
vasculorum NCPPB702]
gi|289668820|ref|ZP_06489895.1| OmpA family outer membrane protein [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 365
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 8/139 (5%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDF 83
D +S S V FD + ++RP I +LS L+++
Sbjct: 227 DKCPNSQPGQTIGPDGCPVPVSIDLKGVNFDFNKSTLRPDAISILSEATEILKRYPDLKV 286
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYG----- 137
+ GH D G+ + L RRA V++Y G+ ASR+ YG+ P
Sbjct: 287 EVAGHTDSKGTDAYNQKLSERRATTVYDYLTKNGVDASRLVGPIGYGESRPIAPNTNPDG 346
Query: 138 -HDEDAYAKNRRAIVFLKG 155
+ + AKNRR + ++
Sbjct: 347 SDNPEGRAKNRRTELNVQN 365
>gi|162452165|ref|YP_001614532.1| outer membrane protein [Sorangium cellulosum 'So ce 56']
gi|161162747|emb|CAN94052.1| outer membrane protein [Sorangium cellulosum 'So ce 56']
Length = 467
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 39/103 (37%), Gaps = 1/103 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+ F + + A L L IEGH D +G + +L L RA V
Sbjct: 362 INFQFGTTELTEASRPKLEALADILDAYPTARVRIEGHTDAVGGAEGNRSLSLARAQEVR 421
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
N AR I+ R++V G P A+NRR V +
Sbjct: 422 NELTARQIAPDRIEVAGMGANQPVAPNDTAGGRAQNRRIDVTV 464
>gi|13472158|ref|NP_103725.1| hypothetical protein mlr2359 [Mesorhizobium loti MAFF303099]
gi|14022903|dbj|BAB49511.1| mlr2359 [Mesorhizobium loti MAFF303099]
Length = 504
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 44/117 (37%), Gaps = 5/117 (4%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS-----RN 96
+ + + + F + ++ + +++ L+ I GH D +
Sbjct: 373 DFIVVEISNQLLFASGQAELKAQFQPIAADIAKALDAEAGPIKIVGHTDNVKPKKSSAFK 432
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L + RA AV + SR+ V G++ P D AKNRR V +
Sbjct: 433 SNFDLSVARAKAVQAMIARQLKDPSRLSVDGKGEDEPIADNATADGRAKNRRVDVMI 489
>gi|150019639|ref|YP_001311893.1| OmpA/MotB domain-containing protein [Clostridium beijerinckii NCIMB
8052]
gi|149906104|gb|ABR36937.1| OmpA/MotB domain protein [Clostridium beijerinckii NCIMB 8052]
Length = 244
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 5/117 (4%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRN----S 97
E + S+ D V F++ + Q+L + L D + + G+ D + N S
Sbjct: 115 EGLAISIQDVVLFNSGEADVLKDVSQLLLKISHMLYGLDNEIKVAGYTDNVPINNGKFRS 174
Query: 98 SIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA V NY V+ G I+ ++ + +YG+ MP ED AKNRR +F+
Sbjct: 175 NWDLSAMRAINVLNYMVSTGGINQEKISIQAYGEHMPKASNATEDGRAKNRRVEIFV 231
>gi|166710885|ref|ZP_02242092.1| outer membrane protein [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 365
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 8/139 (5%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDF 83
D +S S V FD + ++RP I +LS L+++
Sbjct: 227 DKCPNSQPGQTIGPDGCPVPVSIDLKGVNFDFNKSTLRPDAISILSEATEILKRYPDLKV 286
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYG----- 137
+ GH D G+ + L RRA V++Y G+ ASR+ YG+ P
Sbjct: 287 EVAGHTDSKGTDAYNQKLSERRATTVYDYLTKNGVDASRLVGPIGYGESRPIAPNTNPDG 346
Query: 138 -HDEDAYAKNRRAIVFLKG 155
+ + AKNRR + ++
Sbjct: 347 SDNPEGRAKNRRTELNVQN 365
>gi|163732848|ref|ZP_02140293.1| OmpA domain protein [Roseobacter litoralis Och 149]
gi|161394208|gb|EDQ18532.1| OmpA domain protein [Roseobacter litoralis Och 149]
Length = 176
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 51/140 (36%), Gaps = 3/140 (2%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSV--GDSVFFDTSSYSIRPADIQVLSNLGS 74
+ +D + P L + E + + G + F+ S +I A + + +
Sbjct: 9 AAFDVDIAYVEALDPVAALPTAEECEMKIADIVAGSKINFEPGSATIDAAALTTMDQIAD 68
Query: 75 WLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
L D ++GH D G + +L RA +V N AR + S YG+ P
Sbjct: 69 VLRVCGDLKLEVQGHTDSQGREEMNRSLSQARAQSVLNELRARKVLTSNFIAKGYGEANP 128
Query: 134 SVYGHDEDAYAKNRRAIVFL 153
E+ NRR L
Sbjct: 129 IADNDTEEGREANRRIEFKL 148
>gi|77918162|ref|YP_355977.1| hypothetical protein Pcar_0547 [Pelobacter carbinolicus DSM 2380]
gi|77544245|gb|ABA87807.1| conserved OmpA/MotB domain protein [Pelobacter carbinolicus DSM
2380]
Length = 420
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 47/125 (37%), Gaps = 3/125 (2%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGH 88
PDT + ++ + + FD I+P L +++ + L+ GH
Sbjct: 289 PDTPKGMNVDEKGCDLKLTLRINFDFDQAVIKPEFKGELDKAAAFVRANANVPFILLAGH 348
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
D G + L +RA AV + A+++K YG+ P E+ NR
Sbjct: 349 TDSKGRDTYNQRLSEKRAEAVRQALIDNYGLDAAKLKSRGYGEAQPVATNDTEEGRYLNR 408
Query: 148 RAIVF 152
R +
Sbjct: 409 RVELI 413
>gi|27376195|ref|NP_767724.1| hypothetical protein blr1084 [Bradyrhizobium japonicum USDA 110]
gi|27349334|dbj|BAC46349.1| blr1084 [Bradyrhizobium japonicum USDA 110]
Length = 464
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/130 (25%), Positives = 47/130 (36%), Gaps = 1/130 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFL 84
T + V Q + F T I P +L +L +
Sbjct: 335 TVKPAAGPVDGTVCQQLFSELLNKGKIRFATKRADIDPDSAGILDHLIETALRCPTTNID 394
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+ GH D G + AL +RA AV +Y V G+ ASR YG P +D A
Sbjct: 395 VAGHTDADGEDAFNQALSEKRAQAVIDYLVKAGLPASRFTAIGYGSTQPVAGNDTDDGKA 454
Query: 145 KNRRAIVFLK 154
+NRR ++
Sbjct: 455 QNRRIEFLVR 464
>gi|307824498|ref|ZP_07654723.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
gi|307734482|gb|EFO05334.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
Length = 265
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 51/144 (35%), Gaps = 4/144 (2%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
+ +SG D +++ + + F + + I VL +
Sbjct: 92 LSQVSGQFEQVLAPFIQDNLVSVKKNDYWIELEMNSEMLFLSGEAELSKKAIPVLQKIVE 151
Query: 75 WLEKHDCDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
+ IEGH D + S+ L RA +V + FV GI+ R+ YG+
Sbjct: 152 VINPLPNMVNIEGHTDNIPIDNIKFRSNWDLSSARATSVVHEFVKEGINPPRLSAIGYGE 211
Query: 131 EMPSVYGHDEDAYAKNRRAIVFLK 154
P E KNRR ++ L
Sbjct: 212 FHPIGDNKIEAGRFKNRRVVLVLM 235
>gi|320008837|gb|ADW03687.1| OmpA/MotB domain protein [Streptomyces flavogriseus ATCC 33331]
Length = 216
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 41/125 (32%), Gaps = 2/125 (1%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIE 86
+ + ++ V F S + ++ + ++ +
Sbjct: 85 VEDMGGEERREDTNADITFALQAEVLFGKDSAKLSGEATARINAIALEIQTQKAPKVRVF 144
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
G D LGS L +RA AV + + ++ YG++ P ED KN
Sbjct: 145 GFTDNLGSSAHGDVLSKQRANAVQGVLATKLP-SVTFEIRGYGEQYPIASNDTEDGRKKN 203
Query: 147 RRAIV 151
RR V
Sbjct: 204 RRVEV 208
>gi|302532142|ref|ZP_07284484.1| type VI secretion system OmpA/MotB [Streptomyces sp. C]
gi|302441037|gb|EFL12853.1| type VI secretion system OmpA/MotB [Streptomyces sp. C]
Length = 214
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 21/116 (18%), Positives = 43/116 (37%), Gaps = 2/116 (1%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRN 96
+ ++ V F S + A ++ + + ++ ++ G D LG+
Sbjct: 91 EESSDDVKLTLQSEVLFAKDSAELSGAAGARIAEVAQEIRQNSPRKVMVCGFTDNLGTYA 150
Query: 97 SSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
L +RA AV A+ ++ +V ++ P E+ KNRR +
Sbjct: 151 HGKTLSTQRAEAVHKALAAQLSASGIAYEVVGKSEDDPIADNSTEEGRKKNRRVEI 206
>gi|209809526|ref|YP_002265064.1| outer membrane protein, OmpA family [Aliivibrio salmonicida
LFI1238]
gi|208011088|emb|CAQ81507.1| outer membrane protein, OmpA family [Aliivibrio salmonicida
LFI1238]
Length = 222
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
V E + + + V F +SSY + + L+ + +E D I+GH D
Sbjct: 96 SGVQVERVGDNELKLIMDNGVGFQSSSYQLDASIYNTLNGVARILVEYPDTALQIDGHTD 155
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G+ + L +RA +V Y + + ++A R+ YG+ P A NRR
Sbjct: 156 SSGNDTKNQTLSEQRAESVRTYLIKQKVAAGRVNARGYGERYPVFDNSTSQGRACNRRVE 215
Query: 151 VFL 153
+ +
Sbjct: 216 ITI 218
>gi|70671520|gb|AAZ06132.1| outer membrane protein A [Acinetobacter sp. V-26]
Length = 349
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 56/141 (39%), Gaps = 5/141 (3%)
Query: 20 GIDNLDTKISSPDTVLNESS-LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LE 77
++ P V + L E + + VFFDT+ I+P ++ + E
Sbjct: 203 AAPVVEVAPVEPTPVAPQPQELTEDLNMEL--RVFFDTNKSDIKPQYKSEIAKVAEKLAE 260
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVY 136
+ IEGH D G R + L L RA +V + V + ASR+ + + P
Sbjct: 261 YPNATARIEGHTDNTGPRALNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIAD 320
Query: 137 GHDEDAYAKNRRAIVFLKGCR 157
++ A NRR + G R
Sbjct: 321 NKTKEGRAMNRRVFAAISGSR 341
>gi|320354880|ref|YP_004196219.1| peptidoglycan-associated lipoprotein [Desulfobulbus propionicus DSM
2032]
gi|320123382|gb|ADW18928.1| peptidoglycan-associated lipoprotein [Desulfobulbus propionicus DSM
2032]
Length = 170
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 79/165 (47%), Gaps = 13/165 (7%)
Query: 2 QYSTIFIILSAITM-MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDS--------- 51
+ F++L+ + + +S++G +S T + E +
Sbjct: 4 KKMLNFVMLAFLALGVSLTGCSKKAADTTSQVTGTEGAGASEPLETEDSGIMEGRTSGPM 63
Query: 52 --VFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYA 108
V+F+ S SI +Q + +++K+ IEG+ D G++ +IALG RRA +
Sbjct: 64 VPVYFEFDSSSITGEQVQRIETNADFIKKNPDLKIRIEGNCDPRGTQEYNIALGERRAQS 123
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
Y + G++++++ S+G+E ++GHDE ++A+NRR +
Sbjct: 124 AKTYLINLGVNSNQLTTVSFGEEKLLLFGHDEISWAQNRRDDFVI 168
>gi|226940371|ref|YP_002795445.1| Outer membrane protein A [Laribacter hongkongensis HLHK9]
gi|226715298|gb|ACO74436.1| Outer membrane protein A [Laribacter hongkongensis HLHK9]
Length = 226
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 47/128 (36%), Gaps = 1/128 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+ ++ FDT+S S++P + ++ + + I GH D
Sbjct: 98 GQIFVVKRADNSILVTMTSQTAFDTNSASLKPGFMPTINTISRIVNQYGKTTLDITGHTD 157
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G+ ++ L RA AV N ++R + R+ G P E NRR
Sbjct: 158 STGNDRINVPLSQNRAAAVQNALLSRNVHPQRLSAYGMGASQPRASNASEAGRQLNRRVE 217
Query: 151 VFLKGCRA 158
+ ++ A
Sbjct: 218 ILIEPVAA 225
>gi|254524919|ref|ZP_05136974.1| outer membrane protein [Stenotrophomonas sp. SKA14]
gi|219722510|gb|EED41035.1| outer membrane protein [Stenotrophomonas sp. SKA14]
Length = 363
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 53/139 (38%), Gaps = 8/139 (5%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDF 83
D +S S V FD ++RP + +L L+++
Sbjct: 225 DKCPNSQPGQTIGPDGCPVPVSIDLKGVNFDFDKSNLRPDAVAILGEATEILKRYPDLRV 284
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYG----- 137
+ GH D G+ + L RRA AV+NY G+ A R+ YGK P
Sbjct: 285 EVAGHTDSKGTDAYNQKLSERRATAVYNYLTKNGVDAGRLIGPVGYGKSRPIAPNTNPDG 344
Query: 138 -HDEDAYAKNRRAIVFLKG 155
+ + AKNRR + ++
Sbjct: 345 SDNPEGRAKNRRTELNVQN 363
>gi|206558755|ref|YP_002229515.1| putative outer membrane protein [Burkholderia cenocepacia J2315]
gi|198034792|emb|CAR50659.1| putative outer membrane protein [Burkholderia cenocepacia J2315]
Length = 316
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++ F+T S ++ P +L + + + + I GH D G+R S+IAL RA
Sbjct: 209 NRTIEFETGSATLTPQGKLILDQMAAALAKMQNRTVDIIGHTDNSGNRTSNIALSQARAD 268
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV Y + + I +M T G + P D A+NRR +
Sbjct: 269 AVKGYLITKSIPPQQMTTTGVGPDQPIAPNDTADGRARNRRIEFRV 314
>gi|307610480|emb|CBX00052.1| hypothetical protein LPW_18071 [Legionella pneumophila 130b]
Length = 267
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 60/143 (41%), Gaps = 5/143 (3%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQF-SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
G+D L+ +S + + + QE + + FD+ S I+P + L L ++
Sbjct: 88 GLDELNKSLSELEDGDFKLNRQEGWVEIDIKAGSLFDSGSADIKPEALIKLMKLAEKIKN 147
Query: 79 HDCDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
++EG+ D + S+ L RA V GI+ R+ VT YG + P
Sbjct: 148 LPFTVVVEGYTDNVPIETPQYPSNWELSAARAATVGRILNGFGIANHRILVTGYGDQYPI 207
Query: 135 VYGHDEDAYAKNRRAIVFLKGCR 157
+ E ++NRR + + R
Sbjct: 208 TDNYTEAGRSQNRRVNILITKNR 230
>gi|163801079|ref|ZP_02194979.1| putative lipoprotein [Vibrio sp. AND4]
gi|159175428|gb|EDP60225.1| putative lipoprotein [Vibrio sp. AND4]
Length = 219
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
V E + Q + + + F +SSY + + L + +E D +I+G+ D
Sbjct: 93 SGVQVERVGENQLLLRMENGIGFTSSSYQLDSSIHNTLRGVARILVEYPDTSLVIDGYTD 152
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + + L RRA +V Y V++ ++A R YG+ P D A NRR
Sbjct: 153 STGSDSYNQTLSERRAESVRQYLVSQNVAAGRAIARGYGERNPICSNQTSDGRACNRRVE 212
Query: 151 VFL 153
+ +
Sbjct: 213 IQI 215
>gi|154490195|ref|ZP_02030456.1| hypothetical protein PARMER_00427 [Parabacteroides merdae ATCC
43184]
gi|154089087|gb|EDN88131.1| hypothetical protein PARMER_00427 [Parabacteroides merdae ATCC
43184]
Length = 214
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 53/130 (40%), Gaps = 2/130 (1%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFL 84
+T + + E + + F T+S ++ A L +L + D D
Sbjct: 69 EATLPEETTVETINNGEALKVTFDSGILFATNSSTVSAASKSALRDLAASLNANPDTDIK 128
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAY 143
I GH D G + + L +RA +VF+Y + +G+S+ RM G P +
Sbjct: 129 IIGHTDNTGKVDYNQTLSEKRAKSVFDYLMEDQGVSSKRMTYEGKGVHEPVADNSTPEGR 188
Query: 144 AKNRRAIVFL 153
A NRR + +
Sbjct: 189 ALNRRVEILI 198
>gi|332975480|gb|EGK12371.1| OmpA/OmpF family outer membrane protein OprF [Psychrobacter sp.
1501(2011)]
Length = 318
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 52/131 (39%), Gaps = 2/131 (1%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKH 79
++ D + +T E + + ++ + V FD S I+P Q L + +
Sbjct: 181 VEAKDCTTITQETETVEPPARVEVNTPITLDVLFDFDSAKIKPTYQQRLREVAQFLSANA 240
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGH 138
+ ++EGH D G + ++ L RA AV V + I +R+ YG+ P
Sbjct: 241 NTKAILEGHTDSTGPASYNLTLSQARAEAVKKELVNKHGIDPNRLTTQGYGESKPIDNNS 300
Query: 139 DEDAYAKNRRA 149
NRR
Sbjct: 301 TVQGRQNNRRV 311
>gi|259417312|ref|ZP_05741231.1| OmpA/MotB domain protein [Silicibacter sp. TrichCH4B]
gi|259346218|gb|EEW58032.1| OmpA/MotB domain protein [Silicibacter sp. TrichCH4B]
Length = 519
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 42/119 (35%), Gaps = 5/119 (4%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----- 94
+ V +++ F + S + ++++ L + GH D +
Sbjct: 397 TNDWVLIRVSEALRFRSGSEDLTSDIDSLIASAAKALNAEQGPIRVVGHTDSVPMSGRGR 456
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA V + A+ + R+ V G P + A+NRR + +
Sbjct: 457 FKSNEQLSKARAQTVADLLAAQLEAPDRITVEGKGPVDPIADNGTREGRARNRRVEILI 515
>gi|237753154|ref|ZP_04583634.1| OmpA/MotB domain-containing protein [Helicobacter winghamensis ATCC
BAA-430]
gi|229375421|gb|EEO25512.1| OmpA/MotB domain-containing protein [Helicobacter winghamensis ATCC
BAA-430]
Length = 466
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 50/131 (38%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ + + + Q+ + D+ F ++S ++ P + + + D
Sbjct: 89 SEAKNVKIEFENIKKDGTKQKNDKVIIKDNNQFKSASSTLNPNAKDYYTQIAKTYQVKDK 148
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
LI GH D+ G+ + L +RA AV F G+S + G P + E
Sbjct: 149 KILIVGHTDDTGNSAFNQKLSEKRARAVGKVFAQNGVSTKNIYYQGAGSTQPKADNNTEK 208
Query: 142 AYAKNRRAIVF 152
A+NRR +
Sbjct: 209 GRAENRRVEII 219
>gi|21241777|ref|NP_641359.1| outer membrane protein [Xanthomonas axonopodis pv. citri str. 306]
gi|294627877|ref|ZP_06706456.1| outer membrane protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|294666871|ref|ZP_06732103.1| outer membrane protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|21107151|gb|AAM35895.1| outer membrane protein [Xanthomonas axonopodis pv. citri str. 306]
gi|292597791|gb|EFF41949.1| outer membrane protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292603388|gb|EFF46807.1| outer membrane protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
Length = 365
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 55/139 (39%), Gaps = 8/139 (5%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDF 83
D +S S V FD + ++RP + +LS L+++
Sbjct: 227 DKCPNSQPGQTIGPDGCPVPVSIDLKGVNFDFNKSTLRPDAVSILSEATEILKRYPDLKV 286
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYG----- 137
+ GH D G+ + L RRA V++Y G+ ASR+ YG+ P
Sbjct: 287 EVAGHTDSKGTDAYNQKLSERRATTVYDYLTKNGVDASRLVGPIGYGESRPIAPNTNPDG 346
Query: 138 -HDEDAYAKNRRAIVFLKG 155
+ + AKNRR + ++
Sbjct: 347 SDNPEGRAKNRRTELNVQN 365
>gi|78046598|ref|YP_362773.1| OmpA family outer membrane protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325925345|ref|ZP_08186747.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Xanthomonas perforans 91-118]
gi|78035028|emb|CAJ22673.1| OmpA family outer membrane protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325544223|gb|EGD15604.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Xanthomonas perforans 91-118]
Length = 365
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 55/139 (39%), Gaps = 8/139 (5%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDF 83
D +S S V FD + ++RP + +LS L+++
Sbjct: 227 DKCPNSQPGQTIGPDGCPVPVSIDLKGVNFDFNKSTLRPDAVSILSEATEILKRYPDLKV 286
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYG----- 137
+ GH D G+ + L RRA V++Y G+ ASR+ YG+ P
Sbjct: 287 EVAGHTDSKGTDAYNQKLSERRATTVYDYLTKNGVDASRLVGPIGYGESRPIAPNTNPDG 346
Query: 138 -HDEDAYAKNRRAIVFLKG 155
+ + AKNRR + ++
Sbjct: 347 SDNPEGRAKNRRTELNVQN 365
>gi|284036695|ref|YP_003386625.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
gi|283815988|gb|ADB37826.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
Length = 658
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 54/131 (41%), Gaps = 2/131 (1%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
+ + L S + ++ + +FF++ Y + L L +++ +
Sbjct: 525 TQKTKGEGLTLSVPLEPVSTGASANETLNN-LFFESGRYDLAEKSRTELDRLSVFMQANP 583
Query: 81 -CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
I GH D+ G +++AL +RA AV Y GI SR+K YGK P V
Sbjct: 584 TVAVEISGHTDDKGDAAANLALSQKRAQAVVTYLTKAGIQPSRIKAVGYGKARPLVPNTT 643
Query: 140 EDAYAKNRRAI 150
++ NRR
Sbjct: 644 DENRRLNRRID 654
>gi|237736307|ref|ZP_04566788.1| outer membrane protein [Fusobacterium mortiferum ATCC 9817]
gi|229421655|gb|EEO36702.1| outer membrane protein [Fusobacterium mortiferum ATCC 9817]
Length = 203
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 59/123 (47%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+T + S + + + V F T+S +I L+++ S ++ + ++ G+ D
Sbjct: 77 NTEVEVSREGDNLNLYLPGGVTFATNSANIASNFYGPLNSIASVLVQYPETRIVVNGYTD 136
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G+ + ++ L RRA +V +YF+++G+ + R+ +G P A+NRR
Sbjct: 137 NTGAASYNLDLSQRRANSVRDYFISQGVESYRVTSVGHGINNPRATNSTAAGRAENRRVE 196
Query: 151 VFL 153
+ +
Sbjct: 197 IQI 199
>gi|254516643|ref|ZP_05128702.1| OmpA/MotB domain protein [gamma proteobacterium NOR5-3]
gi|219675066|gb|EED31433.1| OmpA/MotB domain protein [gamma proteobacterium NOR5-3]
Length = 255
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 51/136 (37%), Gaps = 3/136 (2%)
Query: 22 DNLDTKISSPDTVLNE--SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEK 78
D D ++P V + + D + F S ++ L +
Sbjct: 120 DYKDQCANTPAGVKVDMKGCPVKDEVVLTIDRLGFAFDSAALDAKSRSALDAAVAVIKSH 179
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ G+ D G + L RRA A +Y V++G++A +++ T G+ P
Sbjct: 180 SSVKMDVVGYTDSSGPEEYNQKLSERRAQAAVDYLVSQGVAAGQLRATGRGEANPVASND 239
Query: 139 DEDAYAKNRRAIVFLK 154
D +NRR + ++
Sbjct: 240 SRDGRERNRRVELVVR 255
>gi|145297815|ref|YP_001140656.1| peptidoglycan-associated lipoprotein [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142850587|gb|ABO88908.1| peptidoglycan-associated lipoprotein [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 174
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 1/134 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
G+ + T ++ E Q+ + + ++F Y I+ +L S+ E+
Sbjct: 40 GMGGVQTGGANGMLSPEEQMRQKFEALQRDNVIYFPFDGYDIQGQYADLLDAHASYLRER 99
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
LIEGHADE G+ +IALG RRA AV Y G+ A ++ + SYG+E P H
Sbjct: 100 PSVKVLIEGHADERGTPEYNIALGERRAKAVAKYLQTLGVQAEQLSIVSYGEEKPLDLSH 159
Query: 139 DEDAYAKNRRAIVF 152
EDA+AKNRRA++
Sbjct: 160 TEDAFAKNRRAVLV 173
>gi|120435967|ref|YP_861653.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
gi|117578117|emb|CAL66586.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
Length = 235
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/135 (27%), Positives = 58/135 (42%), Gaps = 3/135 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDS--VFFDTSSYSIRPADIQVLSNLGSWLEKH 79
D +I + E + + +S V+FDT Y+I L+ L +++
Sbjct: 80 DKQAKQIEEEIPGAEVERVGEGINVTFDESSGVYFDTEKYNINAKSQTTLNKLADIFKEY 139
Query: 80 -DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ L+EGH D+ GS + ++ L RA AV Y V GI R YG+ P
Sbjct: 140 PQSNVLVEGHTDDTGSDSYNLTLSKNRAQAVTGYLVDNGIDRGRFTTKWYGESQPKYDNT 199
Query: 139 DEDAYAKNRRAIVFL 153
D +KNRR + +
Sbjct: 200 TADGRSKNRRVELAI 214
>gi|116330986|ref|YP_800704.1| endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116124675|gb|ABJ75946.1| Endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 340
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 48/116 (41%), Gaps = 6/116 (5%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGS----RNSS 98
++ D + FD+ S ++ + L + L + + +IEGH D + + +
Sbjct: 222 LVINIDDRISFDSGSAELKKQILPALDKIKEILGNYPGNLIIIEGHTDNVPIRTRKFSDN 281
Query: 99 IALGLRRAYAVFNY-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V +Y ++ + + YG+ P V + A NRR + +
Sbjct: 282 WQLSGERALSVLHYFLESKILDPRNFSLAGYGEFQPIVSNDTPENRALNRRVDIVV 337
>gi|116328262|ref|YP_797982.1| endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116121006|gb|ABJ79049.1| Endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
Length = 340
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 48/116 (41%), Gaps = 6/116 (5%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGS----RNSS 98
++ D + FD+ S ++ + L + L + + +IEGH D + + +
Sbjct: 222 LVINIDDRISFDSGSAELKKQILPALDKIKEILGNYPGNLIIIEGHTDNVPIRTRKFSDN 281
Query: 99 IALGLRRAYAVFNY-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V +Y ++ + + YG+ P V + A NRR + +
Sbjct: 282 WQLSGERALSVLHYFLESKILDPRNFSLAGYGEFQPIVSNDTPENRALNRRVDIVV 337
>gi|121594094|ref|YP_985990.1| TonB box domain-containing protein [Acidovorax sp. JS42]
gi|222111172|ref|YP_002553436.1| peptidoglycan-associated lipoprotein [Acidovorax ebreus TPSY]
gi|120606174|gb|ABM41914.1| TonB box domain protein [Acidovorax sp. JS42]
gi|221730616|gb|ACM33436.1| peptidoglycan-associated lipoprotein [Acidovorax ebreus TPSY]
Length = 180
Score = 76.4 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 26/177 (14%)
Query: 1 MQ---YSTIFIILSAITMMSISGIDNL-------DTKISSPDTVLNESSL---------- 40
M + + + LS + +M+ D +S N S
Sbjct: 1 MNRFPFKRVSLALSIVALMAGCSSGVKLDDVPVEDRGATSTAPGANSGSTGQSGVAPVDL 60
Query: 41 -----QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGS 94
V ++FD S+ ++P VL +++ ++EGH DE G
Sbjct: 61 SQSGRDAAGPVGVARVIYFDFDSFIVKPEFQSVLEAHARFMKASSARKVVLEGHTDERGG 120
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
R ++ALG +RA AV G+ ++++ S+GKE P+V GH EDA+++NRR +
Sbjct: 121 REYNLALGQKRAEAVRRSLGLLGVQDAQVEAVSFGKEKPAVQGHTEDAHSQNRRVEL 177
>gi|89899024|ref|YP_521495.1| OmpA/MotB [Rhodoferax ferrireducens T118]
gi|89343761|gb|ABD67964.1| OmpA/MotB [Rhodoferax ferrireducens T118]
Length = 217
Score = 76.0 bits (185), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 1/129 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FL 84
+ ++ V + Q ++ + FD + + I+P +L L
Sbjct: 82 ERATAGTGVDVMQTADNQLKLNIPSDISFDINRFDIKPNMRPILDQFAQGLSSQPNTEIR 141
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
I GH D GS + + L + RA + +Y VARG+ R+++ G P + E A
Sbjct: 142 IIGHTDSTGSDSINDPLSVNRAASARDYLVARGVDGRRIQINGRGSHEPIADNNTERGRA 201
Query: 145 KNRRAIVFL 153
+NRR +FL
Sbjct: 202 QNRRIEIFL 210
>gi|114569157|ref|YP_755837.1| OmpA/MotB domain-containing protein [Maricaulis maris MCS10]
gi|114339619|gb|ABI64899.1| OmpA/MotB domain protein [Maricaulis maris MCS10]
Length = 227
Score = 76.0 bits (185), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIA 100
+ V F T+S I+ +LS++ + L ++ + GHAD +G+ + +
Sbjct: 109 NDLRLIMPGDVTFATNSADIQGQFYGILSDVSTVLNRYPATYVDVVGHADSVGAADYNQQ 168
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L RRA +V NY +A+G+ R + G+ P +NRR + ++
Sbjct: 169 LSERRALSVGNYLIAQGVLRDRFYIAGMGERSPIASNETAAGRQQNRRVEILIR 222
>gi|86138080|ref|ZP_01056655.1| hypothetical protein MED193_01095 [Roseobacter sp. MED193]
gi|85825107|gb|EAQ45307.1| hypothetical protein MED193_01095 [Roseobacter sp. MED193]
Length = 347
Score = 76.0 bits (185), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 56/141 (39%), Gaps = 1/141 (0%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+ ++ + + + E+ + S SV F + + L +L
Sbjct: 205 VLAAVPAVSGATAALETAGDFSREACIGRFDILSQSRSVNFAPGTSRLDQRSTSFLDSLF 264
Query: 74 SWLEKHDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
+ + + + GH D+ GS ++ L +RA +V Y +GI+ R++ YG+
Sbjct: 265 DIISRCPAMVIEVGGHTDDKGSAAANTRLSQKRASSVVRYLSDKGIARDRLQSVGYGEST 324
Query: 133 PSVYGHDEDAYAKNRRAIVFL 153
P V + AKNRR +
Sbjct: 325 PLVPNNSAQNRAKNRRIAFKV 345
>gi|330815362|ref|YP_004359067.1| OmpA/MotB [Burkholderia gladioli BSR3]
gi|327367755|gb|AEA59111.1| OmpA/MotB [Burkholderia gladioli BSR3]
Length = 345
Score = 76.0 bits (185), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++ F+T S ++ P +L + + + I GH D G+R ++I+L RA
Sbjct: 238 NRTIEFETGSATLTPQGRAILDQMADAMSKLANRQVTIIGHTDNSGNRATNISLSQARAD 297
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
AV Y VA+GI++ ++ T G + P D A+NRR +
Sbjct: 298 AVKGYLVAKGIASQQLTTTGVGPDQPIASNDTADGRARNRRIEFRVS 344
>gi|323498434|ref|ZP_08103430.1| outer membrane protein OmpA [Vibrio sinaloensis DSM 21326]
gi|323316507|gb|EGA69522.1| outer membrane protein OmpA [Vibrio sinaloensis DSM 21326]
Length = 322
Score = 76.0 bits (185), Expect = 1e-12, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 41/101 (40%), Gaps = 1/101 (0%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F +S + P L L +L + + G+ D G+ + + + +RA +V
Sbjct: 213 FKLNSTELNPESASQLDKLVDFLNTYPQATVEVIGYTDTSGAASYNQMISEKRAQSVAAA 272
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
A+G+ ASR+ G+ P + NRR V +
Sbjct: 273 LEAKGVDASRISAKGEGENDPIASNATREGREMNRRVEVIV 313
>gi|90577941|ref|ZP_01233752.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14]
gi|90441027|gb|EAS66207.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14]
Length = 347
Score = 76.0 bits (185), Expect = 1e-12, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 38/124 (30%), Gaps = 5/124 (4%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEG 87
+ V + E + ++ V + D Q L + + G
Sbjct: 203 DTAPPVQAATVTVEPSTVTIAYGV----DGKHLTQEDKQRLQPMIQRLTRYPSATVEVTG 258
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+ GS + L +RA V + AS++ G+ P A+NR
Sbjct: 259 YTSNTGSVAYNQKLSEKRAKNVADLLSQYVADASQITAKGMGEANPIATNDTAKGRAENR 318
Query: 148 RAIV 151
R +
Sbjct: 319 RVEI 322
>gi|295691294|ref|YP_003594987.1| OmpA/MotB domain-containing protein [Caulobacter segnis ATCC 21756]
gi|295433197|gb|ADG12369.1| OmpA/MotB domain protein [Caulobacter segnis ATCC 21756]
Length = 224
Score = 76.0 bits (185), Expect = 1e-12, Method: Composition-based stats.
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 2/115 (1%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIA 100
+Q + V FD I+P ++VL ++ + GHAD G+ +
Sbjct: 106 DQIVLVMPSDVTFDVDRSDIQPRFVRVLDDVARTLNAYPQTTIDVVGHADSSGADEYNQV 165
Query: 101 LGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L RRA AV Y ++G R+ V G+ P A+NRR + L+
Sbjct: 166 LSERRASAVAGYLTSQGRVLPDRVFVAGMGERQPIADNSTAAGRAENRRVEIVLR 220
>gi|123444325|ref|YP_001008290.1| putative outer membrane lipoprotein [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122091286|emb|CAL14172.1| putative lipoprotein [Yersinia enterocolitica subsp. enterocolitica
8081]
Length = 219
Score = 76.0 bits (185), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 64/124 (51%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FDT S +++PA L+ + L+++D + G+ D
Sbjct: 94 GTGVSVTRQGDNIVLNMPNNVTFDTDSSNLKPAGANTLTGVAMVLKEYDKTAVNVTGYTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G+R ++ L +RA +V + + +G++A+R++ + G + P A+NRR
Sbjct: 154 STGARAHNMTLSQQRADSVGSALIVQGVAANRIRTSGAGPDNPVASNSTAAGKAQNRRVE 213
Query: 151 VFLK 154
+ L
Sbjct: 214 ITLS 217
>gi|323529927|ref|YP_004232079.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1001]
gi|323386929|gb|ADX59019.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1001]
Length = 321
Score = 76.0 bits (185), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAY 107
++ F+T S ++ P +L + + ++K I GH D G+R S+IAL RA
Sbjct: 214 NRTIEFETGSATLTPQGRAILDQMAAAMQKMTTKTVAIIGHTDNSGNRASNIALSQARAD 273
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
AV Y VA+G+ +M T G + P D A+NRR
Sbjct: 274 AVKGYLVAKGVPPQQMSTTGVGPDQPIASNDTADGRARNRRIEF 317
>gi|114570965|ref|YP_757645.1| OmpA/MotB domain-containing protein [Maricaulis maris MCS10]
gi|114341427|gb|ABI66707.1| OmpA/MotB domain protein [Maricaulis maris MCS10]
Length = 173
Score = 76.0 bits (185), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 66/161 (40%), Gaps = 14/161 (8%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKI-------------SSPDTVLNESSLQEQFSSS 47
M+ I + + DT + P + + F ++
Sbjct: 1 MKIKLFAIAALGAFATACASTPVEDTAPVRDTRPVDPPIEDTRPIETGPMAGSPDHFVAT 60
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRA 106
GD VF+ + + L +WL + L+ G+ DE G+R ++ALG RRA
Sbjct: 61 AGDRVFYGLDRHDLSDEARATLRRQAAWLASYPGTRILVAGNCDERGTREYNLALGARRA 120
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
A Y +++G+ SR+ TSYGKE PS E +A NR
Sbjct: 121 SAARTYLISQGVDPSRISTTSYGKERPSCSQSSETCWAVNR 161
>gi|289208253|ref|YP_003460319.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
gi|288943884|gb|ADC71583.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
Length = 272
Score = 76.0 bits (185), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 54/144 (37%), Gaps = 5/144 (3%)
Query: 20 GIDNLDTKISSPDTVLNESSL-QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
G +++ E + + D + F + ++P +L+ L L++
Sbjct: 126 GTATTASRMREQAPQGVEVVEHPGRTELRIQDEILFASGQADLQPEGRMLLAQLEPLLDE 185
Query: 79 HDCDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
HD +EGH D + S+ L RA V Y + +G+ A R++ P
Sbjct: 186 HDGLITVEGHTDNIPIATERFPSNWELSSARASGVVRYLLDQGLEAERLRAVGRADTQPV 245
Query: 135 VYGHDEDAYAKNRRAIVFLKGCRA 158
++NRR + L+ A
Sbjct: 246 ASNDTARGRSENRRVALILESPTA 269
>gi|17548982|ref|NP_522322.1| lipoprotein [Ralstonia solanacearum GMI1000]
gi|17431232|emb|CAD17912.1| putative outer membrane protein [Ralstonia solanacearum GMI1000]
Length = 277
Score = 76.0 bits (185), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 51/120 (42%), Gaps = 3/120 (2%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADE 91
++E SL +Q + + F+T S ++ P +L + + + I GH D
Sbjct: 156 AAVSEQSLLDQTLA--NRIIEFETGSATLTPKGRGILDEMAAVLPRLNGRKIEIVGHTDN 213
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
GSR ++ L RA V NY +++G + G + P ++ ++NRR
Sbjct: 214 SGSRAMNLNLSQARAETVKNYLISKGAEPGTLTAIGVGPDQPVAPNATDEGRSRNRRIEF 273
>gi|293397221|ref|ZP_06641494.1| peptidoglycan-associated lipoprotein [Serratia odorifera DSM 4582]
gi|291420241|gb|EFE93497.1| peptidoglycan-associated lipoprotein [Serratia odorifera DSM 4582]
Length = 179
Score = 76.0 bits (185), Expect = 1e-12, Method: Composition-based stats.
Identities = 49/137 (35%), Positives = 71/137 (51%), Gaps = 1/137 (0%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
S G + S + E + + + V+F Y I Q+L ++L
Sbjct: 42 SGVGAGGTGMESGSSNLSSEEQARLQMQELQKNNIVYFGLDKYDISSEFAQMLDAHATFL 101
Query: 77 EKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+ +EGHADE G+ +IALG RRA AV Y +G+SA ++ + SYGKE P+V
Sbjct: 102 RNNPSYKVTVEGHADERGTPEYNIALGERRANAVKMYLQGKGVSADQISIVSYGKEKPAV 161
Query: 136 YGHDEDAYAKNRRAIVF 152
GHDE AY+KNRRA++
Sbjct: 162 LGHDEAAYSKNRRAVLV 178
>gi|218887954|ref|YP_002437275.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218758908|gb|ACL09807.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 248
Score = 76.0 bits (185), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 50/135 (37%), Gaps = 6/135 (4%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFL 84
+ +L SS + + ++ V F+ S +I ++L ++ ++ D D
Sbjct: 105 AQSRGMSDILTGSSEDGKITLNMPAGVLFEPGSDTITAEGRKLLQHMYDLFVRHPDQDIN 164
Query: 85 IEGHADELGS-----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ G D + + L RA V + GI+ R+ T P
Sbjct: 165 VRGFTDSSPTPSGGRFRDNWDLSSSRAINVLRTLLDMGIAPHRITATGLADMNPLFPNTT 224
Query: 140 EDAYAKNRRAIVFLK 154
E+ A+NRR L+
Sbjct: 225 EENRARNRRVEFVLE 239
>gi|182418680|ref|ZP_02949956.1| chemotaxis protein MotB [Clostridium butyricum 5521]
gi|237669705|ref|ZP_04529682.1| chemotaxis protein MotB [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182377457|gb|EDT75012.1| chemotaxis protein MotB [Clostridium butyricum 5521]
gi|237654779|gb|EEP52342.1| putative chemotaxis MotB protein [Clostridium butyricum E4 str.
BoNT E BL5262]
Length = 248
Score = 76.0 bits (185), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 58/146 (39%), Gaps = 6/146 (4%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
M++I + + +N +E +V D FD+ I I +LS + +
Sbjct: 92 MVAIKAVMEEEITSEGYSDAINVDINEEGLYITVQDVALFDSGKADIHQNVIPLLSKVSA 151
Query: 75 WLEKHDCDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVA--RGISASRMKVTSY 128
L + + I GH D + +S++ L RA V + V G+ + + ++
Sbjct: 152 MLNGLENEIKIVGHTDNVPIDNSEFHSNMDLSAERAINVRSLLVNSENGLDPEKTSIEAW 211
Query: 129 GKEMPSVYGHDEDAYAKNRRAIVFLK 154
G+ P E A+NRR + +
Sbjct: 212 GELKPKASNDTEQGRAQNRRVEIVVS 237
>gi|87198413|ref|YP_495670.1| OmpA/MotB [Novosphingobium aromaticivorans DSM 12444]
gi|87134094|gb|ABD24836.1| OmpA/MotB [Novosphingobium aromaticivorans DSM 12444]
Length = 174
Score = 76.0 bits (185), Expect = 1e-12, Method: Composition-based stats.
Identities = 48/133 (36%), Positives = 70/133 (52%), Gaps = 2/133 (1%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVG-DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
+ + Q + G D VFFD SY + D L+ SW + +
Sbjct: 40 AANNGDYDANGNYIGPGSQADLRRTAGSDRVFFDFDSYGLDDTDRATLTRQASWLAQYPN 99
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ IEGHADE G+R+ ++ALG RRA A N+ + G++ +RM V SYGKE P G DE
Sbjct: 100 VNVTIEGHADERGTRDYNLALGERRANAAKNFLASLGVATTRMSVVSYGKERPEALGSDE 159
Query: 141 DAYAKNRRAIVFL 153
++A+NRRA+ +
Sbjct: 160 QSWAQNRRAVTMV 172
>gi|22127962|ref|NP_671385.1| putative outer membrane lipoprotein [Yersinia pestis KIM 10]
gi|45443710|ref|NP_995249.1| putative outer membrane lipoprotein [Yersinia pestis biovar
Microtus str. 91001]
gi|51598197|ref|YP_072388.1| outer membrane lipoprotein [Yersinia pseudotuberculosis IP 32953]
gi|108808999|ref|YP_652915.1| putative outer membrane lipoprotein [Yersinia pestis Antiqua]
gi|108813881|ref|YP_649648.1| putative outer membrane lipoprotein [Yersinia pestis Nepal516]
gi|145597343|ref|YP_001161418.1| putative outer membrane lipoprotein [Yersinia pestis Pestoides F]
gi|150260986|ref|ZP_01917714.1| putative lipoprotein [Yersinia pestis CA88-4125]
gi|162420588|ref|YP_001608097.1| putative outer membrane lipoprotein [Yersinia pestis Angola]
gi|165926066|ref|ZP_02221898.1| OmpA family protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165936922|ref|ZP_02225488.1| OmpA family protein [Yersinia pestis biovar Orientalis str. IP275]
gi|166009516|ref|ZP_02230414.1| OmpA family protein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166213252|ref|ZP_02239287.1| OmpA family protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|167398489|ref|ZP_02304013.1| OmpA family protein [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167421106|ref|ZP_02312859.1| OmpA family protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167425514|ref|ZP_02317267.1| OmpA family protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|167467912|ref|ZP_02332616.1| OmpA family protein [Yersinia pestis FV-1]
gi|170022281|ref|YP_001718786.1| putative outer membrane lipoprotein [Yersinia pseudotuberculosis
YPIII]
gi|186897420|ref|YP_001874532.1| putative outer membrane lipoprotein [Yersinia pseudotuberculosis
PB1/+]
gi|218931056|ref|YP_002348931.1| putative outer membrane lipoprotein [Yersinia pestis CO92]
gi|229839783|ref|ZP_04459942.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229841867|ref|ZP_04462023.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. India
195]
gi|229896745|ref|ZP_04511909.1| putative lipoprotein [Yersinia pestis Pestoides A]
gi|229904405|ref|ZP_04519516.1| putative lipoprotein [Yersinia pestis Nepal516]
gi|270488345|ref|ZP_06205419.1| OmpA family protein [Yersinia pestis KIM D27]
gi|294505605|ref|YP_003569667.1| putative lipoprotein [Yersinia pestis Z176003]
gi|21961106|gb|AAM87636.1|AE014011_3 putative outer membrane protein [Yersinia pestis KIM 10]
gi|45438580|gb|AAS64126.1| putative lipoprotein [Yersinia pestis biovar Microtus str. 91001]
gi|51591479|emb|CAH23150.1| OmpA-OmpF family porin [Yersinia pseudotuberculosis IP 32953]
gi|108777529|gb|ABG20048.1| lipoprotein [Yersinia pestis Nepal516]
gi|108780912|gb|ABG14970.1| putative lipoprotein [Yersinia pestis Antiqua]
gi|115349667|emb|CAL22647.1| putative lipoprotein [Yersinia pestis CO92]
gi|145209039|gb|ABP38446.1| lipoprotein [Yersinia pestis Pestoides F]
gi|149290394|gb|EDM40471.1| putative lipoprotein [Yersinia pestis CA88-4125]
gi|162353403|gb|ABX87351.1| OmpA family protein [Yersinia pestis Angola]
gi|165915164|gb|EDR33775.1| OmpA family protein [Yersinia pestis biovar Orientalis str. IP275]
gi|165921926|gb|EDR39103.1| OmpA family protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165991438|gb|EDR43739.1| OmpA family protein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166205550|gb|EDR50030.1| OmpA family protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|166961235|gb|EDR57256.1| OmpA family protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167050993|gb|EDR62401.1| OmpA family protein [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167055528|gb|EDR65321.1| OmpA family protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|169748815|gb|ACA66333.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis YPIII]
gi|186700446|gb|ACC91075.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis PB1/+]
gi|229678523|gb|EEO74628.1| putative lipoprotein [Yersinia pestis Nepal516]
gi|229691206|gb|EEO83259.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. India
195]
gi|229696149|gb|EEO86196.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229700284|gb|EEO88319.1| putative lipoprotein [Yersinia pestis Pestoides A]
gi|262363769|gb|ACY60490.1| putative lipoprotein [Yersinia pestis D106004]
gi|262367705|gb|ACY64262.1| putative lipoprotein [Yersinia pestis D182038]
gi|270336849|gb|EFA47626.1| OmpA family protein [Yersinia pestis KIM D27]
gi|294356064|gb|ADE66405.1| putative lipoprotein [Yersinia pestis Z176003]
gi|320017406|gb|ADW00978.1| putative lipoprotein [Yersinia pestis biovar Medievalis str. Harbin
35]
Length = 219
Score = 76.0 bits (185), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + E ++ ++V FDT+S +++PA L+ + L+++D + G+ D
Sbjct: 94 GTGVSVTRQGENIVLNMPNNVTFDTNSSNLKPAGANTLTGVAMVLKEYDKTAVNVTGYTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G+R +I L +RA V + + +G++A+R++ G + P A+NRR
Sbjct: 154 STGARAHNIVLSQQRADNVASALIVQGVAANRIRTYGAGPDNPVASNSTAAGKAQNRRVE 213
Query: 151 VFLK 154
+ L
Sbjct: 214 ITLS 217
>gi|170754769|ref|YP_001781838.1| chemotaxis MotB protein [Clostridium botulinum B1 str. Okra]
gi|169119981|gb|ACA43817.1| putative chemotaxis MotB protein [Clostridium botulinum B1 str.
Okra]
Length = 254
Score = 76.0 bits (185), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 5/118 (4%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RN 96
+ + D V F++ + +L+ + L+ D + + GH D
Sbjct: 117 ADGLEIDIQDVVLFNSGDAEVLKQSSALLTQISKMLKGLDNNIKVTGHTDNQPISNSKFR 176
Query: 97 SSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA V N+ GISA+++ + +YG+ MP E AKNRR + +
Sbjct: 177 SNWDLSAIRAINVMNFLSNIGGISANKLSIQAYGEYMPKFDNATEAGRAKNRRVEISI 234
>gi|119775600|ref|YP_928340.1| OmpA family protein [Shewanella amazonensis SB2B]
gi|119768100|gb|ABM00671.1| OmpA family protein [Shewanella amazonensis SB2B]
Length = 187
Score = 76.0 bits (185), Expect = 1e-12, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
++FD S + L+ L +E L++GH D++G+ ++ L RA V
Sbjct: 82 IYFDFGSAFVPFEAAAKLAWLAKSIETDHVSLLLQGHTDDIGTEAANYRLSAERADNVAA 141
Query: 112 YFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
R+ S+G+ MP + E +NRR + +
Sbjct: 142 SLAMDFAIPKARITTASFGESMPVAPNNTEIGRQQNRRVDILI 184
>gi|156976121|ref|YP_001447027.1| hypothetical protein VIBHAR_04892 [Vibrio harveyi ATCC BAA-1116]
gi|156527715|gb|ABU72800.1| hypothetical protein VIBHAR_04892 [Vibrio harveyi ATCC BAA-1116]
Length = 321
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+V F S ++ + I G++D GS + L +RA AV
Sbjct: 208 TVQFGLESAELQ-DSSAFNGTVELMNTYPQAQVEINGYSDTTGSEAYNQQLTEKRAQAVA 266
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
+F A GI+A RM V G+ P + +NRR V + + T
Sbjct: 267 EHFQAEGIAADRMTVKGMGEANPVASNETREGREENRRVEVVVPAFQYQT 316
>gi|255533625|ref|YP_003093997.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366]
gi|255346609|gb|ACU05935.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366]
Length = 679
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 7/113 (6%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRA 106
V V ++ + + L L + + + + + H D G ++ L RRA
Sbjct: 564 VLKDVLYEFNKADLTEDSKGKLDYLYTIMVDNPTIEIELSSHTDSKGGEAYNMDLSERRA 623
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYG------HDEDAYAKNRRAIVFL 153
+ +Y + +GI +RM YGK P + A NRR +
Sbjct: 624 KSCVDYLIGKGIPKNRMTSKGYGKTRPIAPNEFPNGKDNPAGRALNRRTEFKV 676
>gi|254786261|ref|YP_003073690.1| hypothetical protein TERTU_2240 [Teredinibacter turnerae T7901]
gi|237686902|gb|ACR14166.1| conserved repeat domain protein [Teredinibacter turnerae T7901]
Length = 3228
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 50/134 (37%), Gaps = 2/134 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQE-QFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKH 79
+ + P S + S + V F T+S + A L N + +
Sbjct: 3086 EAKPAIPAEPAKEYVVISKDDCALFSGTLEGVTFATASAQLTEAAQHTLQNAVDALQRYP 3145
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
I H D +G ++AL RA AV +FVA G+ R+ YG+ P
Sbjct: 3146 RLAISIRAHTDAVGKAEDNLALSEARALAVQQFFVAAGVDNERLSARGYGEAEPVADNST 3205
Query: 140 EDAYAKNRRAIVFL 153
A+NRR + L
Sbjct: 3206 AAGRAQNRRVELKL 3219
>gi|146310897|ref|YP_001175971.1| peptidoglycan-associated outer membrane lipoprotein [Enterobacter
sp. 638]
gi|145317773|gb|ABP59920.1| OmpA domain protein [Enterobacter sp. 638]
Length = 173
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 51/172 (29%), Positives = 79/172 (45%), Gaps = 20/172 (11%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDTVLNESSLQE-------------- 42
MQ + + I L + + + S N S + + +
Sbjct: 1 MQLNKVLKGLMIALPVMAIAACSSNKNASNDQSGEGMMGAGTGMDANGSGNMSSEEQARL 60
Query: 43 -QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIA 100
+ V+FD + IR +L ++L + +EGHADE G+ +I+
Sbjct: 61 QMQQLQQNNIVYFDLDKFDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADERGTPEYNIS 120
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
LG RRA AV Y +G+SA ++ + SYGKE P+V GHDE AY+KNRRA++
Sbjct: 121 LGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYSKNRRAVLV 172
>gi|46578465|ref|YP_009273.1| chemotaxis protein MotB [Desulfovibrio vulgaris str. Hildenborough]
gi|120603951|ref|YP_968351.1| OmpA/MotB domain-containing protein [Desulfovibrio vulgaris DP4]
gi|46447876|gb|AAS94532.1| chemotaxis protein MotB [Desulfovibrio vulgaris str. Hildenborough]
gi|120564180|gb|ABM29924.1| OmpA/MotB domain protein [Desulfovibrio vulgaris DP4]
gi|311232393|gb|ADP85247.1| OmpA/MotB domain protein [Desulfovibrio vulgaris RCH1]
Length = 246
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 53/132 (40%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI 85
+ + + + E ++ + F + PA +++L L L D D +
Sbjct: 109 VEARTVERDVEVLENPEGVVIALTHDLLFPQGQDRLPPASLRLLDTLTDVLAGLDADVNV 168
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
H D L RRA +V +F+ RG+ +R V+ YG + P +A +
Sbjct: 169 SAHTDATEGGADPWDLSDRRALSVLEHFLQRGMDPARFSVSGYGPDRPLDASASPEAAQR 228
Query: 146 NRRAIVFLKGCR 157
NRR + +K +
Sbjct: 229 NRRVEILVKTAK 240
>gi|87121178|ref|ZP_01077069.1| Thrombospondin type 3 repeat:OmpA/MotB [Marinomonas sp. MED121]
gi|86163670|gb|EAQ64944.1| Thrombospondin type 3 repeat:OmpA/MotB [Marinomonas sp. MED121]
Length = 200
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAV 109
VFF+T S IR + + L +++ + +IEGH D G ++ + +L +RA A+
Sbjct: 76 KVFFETDSTEIRFQYYKEIKKLADFMKDNPSSKVVIEGHTDNSGRQSYNQSLSYKRAQAI 135
Query: 110 FNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ + ISA R+K Y + P + KNRR + +
Sbjct: 136 ADILIQSFKISAKRVKAIGYSESRPIASNASAEGKKKNRRVVAEIS 181
>gi|57505781|ref|ZP_00371707.1| outer membrane protein OprF [Campylobacter upsaliensis RM3195]
gi|57016054|gb|EAL52842.1| outer membrane protein OprF [Campylobacter upsaliensis RM3195]
Length = 316
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 53/135 (39%), Gaps = 1/135 (0%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW- 75
++S + I + ++ F+ +I PA + N+
Sbjct: 175 AVSRTSSKVKAICPVQPREGALLDENGCEKTISLEGHFEFDKTTINPAFESRIQNIAKVL 234
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
E + ++EGH D GSR + L RRA V N + G+ R++V YG++ P
Sbjct: 235 EENEKYNTILEGHTDNTGSRAYNQKLSERRAQRVANELMKFGVDKKRIEVKGYGQDKPRS 294
Query: 136 YGHDEDAYAKNRRAI 150
++ A NRR
Sbjct: 295 SNETKEGRADNRRVE 309
>gi|319790061|ref|YP_004151694.1| OmpA/MotB domain protein [Thermovibrio ammonificans HB-1]
gi|317114563|gb|ADU97053.1| OmpA/MotB domain protein [Thermovibrio ammonificans HB-1]
Length = 233
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 38/105 (36%), Gaps = 4/105 (3%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR----NSSIALGLRRAYA 108
F P I ++ + L++ D IEG+ D S+ L RA A
Sbjct: 125 LFPPGEDRPYPQAIPIIMEICRKLKELDLPLTIEGYTDNTPIHTKRFPSNWELSAARATA 184
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ F+ G ++ G P + + AKNRR + +
Sbjct: 185 ILRLFIQCGYDPKKLSAAGCGPYHPIAPNNTPEGRAKNRRIEIVI 229
>gi|294828058|ref|NP_712396.2| endoflagellar motor protein B [Leptospira interrogans serovar Lai
str. 56601]
gi|304570492|ref|YP_001665.2| motility protein B [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
gi|293385905|gb|AAN49414.2| endoflagellar motor protein B [Leptospira interrogans serovar Lai
str. 56601]
Length = 336
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 50/118 (42%), Gaps = 6/118 (5%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGS----RN 96
++ ++ D + FD+ S ++ + L + L + + +IEGH D + +
Sbjct: 216 DRLVINIDDKISFDSGSADLKKQILPALDKIKEILGNYPGNLIIIEGHTDNVPIRTKKFS 275
Query: 97 SSIALGLRRAYAVFNY-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA +V +Y ++ + + YG+ P V + A NRR + +
Sbjct: 276 DNWQLSGERALSVLHYFLESKILDPRNFSLAGYGEFQPIVSNDTPENRALNRRVDIVV 333
>gi|148975688|ref|ZP_01812519.1| outer membrane protein [Vibrionales bacterium SWAT-3]
gi|145964761|gb|EDK30013.1| outer membrane protein [Vibrionales bacterium SWAT-3]
Length = 355
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F T+S + + + L+ + I GH D G+ ++ + +RA AV Y
Sbjct: 235 FATNSTELSDEGKAAVQPIVEVLQTYPQSTVNIVGHTDSTGAAEYNMMISKKRAAAVAAY 294
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+GI +SR+ + G+E P + A+NRR +
Sbjct: 295 IEEQGIESSRITASGEGEEKPIASNDTAEGRAQNRRVEATI 335
>gi|45600818|gb|AAS70302.1| motility protein B [Leptospira interrogans serovar Copenhageni str.
Fiocruz L1-130]
Length = 266
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 50/118 (42%), Gaps = 6/118 (5%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGS----RN 96
++ ++ D + FD+ S ++ + L + L + + +IEGH D + +
Sbjct: 146 DRLVINIDDKISFDSGSADLKKQILPALDKIKEILGNYPGNLIIIEGHTDNVPIRTKKFS 205
Query: 97 SSIALGLRRAYAVFNY-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA +V +Y ++ + + YG+ P V + A NRR + +
Sbjct: 206 DNWQLSGERALSVLHYFLESKILDPRNFSLAGYGEFQPIVSNDTPENRALNRRVDIVV 263
>gi|238793173|ref|ZP_04636801.1| Inner membrane lipoprotein yiaD [Yersinia intermedia ATCC 29909]
gi|238727546|gb|EEQ19072.1| Inner membrane lipoprotein yiaD [Yersinia intermedia ATCC 29909]
Length = 219
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 64/124 (51%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FDT S +++PA L+ + L+++D + G+ D
Sbjct: 94 GTGVSVTRQGDNIVLNMPNNVTFDTDSSNLKPAGANTLTGVAMVLKEYDKTAVNVTGYTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G+R ++ L +RA +V + + +G++A+R++ + G + P A+NRR
Sbjct: 154 SSGARAHNMTLSQQRADSVGSALIVQGVAANRIRTSGAGPDNPVASNSTAAGKAQNRRVE 213
Query: 151 VFLK 154
+ L
Sbjct: 214 ITLS 217
>gi|253997300|ref|YP_003049364.1| OmpA/MotB domain-containing protein [Methylotenera mobilis JLW8]
gi|253983979|gb|ACT48837.1| OmpA/MotB domain protein [Methylotenera mobilis JLW8]
Length = 217
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 1/129 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFL 84
+ ++ V + + + + FD I+ VL + + +
Sbjct: 83 EEATAGTGVGVTQTADNRLKLDIPSDISFDVGRADIKANFRAVLDTFATSLVNNPASNVT 142
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+ GH D GS + L + RA +V +Y VARG+ SR+ + G P V A
Sbjct: 143 VIGHTDNTGSDAVNNPLSVNRAASVRDYVVARGVQHSRITIEGRGAREPLVANDTAANRA 202
Query: 145 KNRRAIVFL 153
KNRR +F+
Sbjct: 203 KNRRVEIFV 211
>gi|218780987|ref|YP_002432305.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01]
gi|218762371|gb|ACL04837.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01]
Length = 199
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEG 87
+ P+ V ++ E ++V F S + P + +L + +L + LI+G
Sbjct: 73 TGPEAVKPSVNVDEMRVRFNTENVHFAFDSSDLSPEAMAILKDKAFFLRLNPSKGVLIKG 132
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
H DE GS ++ALG RRA + N+ GI A R+ SYG+EMP +E A+A NR
Sbjct: 133 HCDERGSLEYNLALGDRRANSAKNFLTDLGIDARRINTISYGEEMPLDPASNEAAWAVNR 192
Query: 148 RAIVFLK 154
R L+
Sbjct: 193 RCEFALE 199
>gi|104782507|ref|YP_609005.1| OmpA family outer membrane protein [Pseudomonas entomophila L48]
gi|95111494|emb|CAK16214.1| putative outer membrane protein, OmpA family [Pseudomonas
entomophila L48]
Length = 257
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 47/130 (36%), Gaps = 2/130 (1%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFL 84
T + L + GD V FDT +R + L +L +
Sbjct: 119 TAQLNALKALKGKETDRGTVVTFGD-VLFDTGRAELRSHSHDDIQRLAQFLRDNPERKVR 177
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+EG D G ++ L RA AV + +G+ +R+ YGK P D +
Sbjct: 178 VEGFTDSTGGDALNLRLSENRAAAVAHALRRQGVDPARIVSAGYGKASPVASNADAHSRQ 237
Query: 145 KNRRAIVFLK 154
NRR V +
Sbjct: 238 LNRRVEVIVS 247
>gi|297192373|ref|ZP_06909771.1| secreted protein [Streptomyces pristinaespiralis ATCC 25486]
gi|197723026|gb|EDY66934.1| secreted protein [Streptomyces pristinaespiralis ATCC 25486]
Length = 203
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 22/140 (15%), Positives = 47/140 (33%), Gaps = 2/140 (1%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
++ + ++ + + ++ V F S + +S +
Sbjct: 59 ATLADPKVVDIKSVVEDISGEERREETNSDIKFALQAEVLFGKDSAELSGEATSRISAIA 118
Query: 74 SWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKE 131
++ + + G D+LG+ L RA AV + + ++ YG++
Sbjct: 119 VEIKNQNAKKIRVFGFTDDLGTEAHGDKLSKERADAVHSVLAQQLSAEGITYEIRGYGED 178
Query: 132 MPSVYGHDEDAYAKNRRAIV 151
P E+ KNRR V
Sbjct: 179 YPIASNTSEEGRRKNRRVEV 198
>gi|313802740|gb|EFS43958.1| OmpA family protein [Propionibacterium acnes HL110PA2]
Length = 368
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 48/136 (35%), Gaps = 2/136 (1%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW--LEK 78
++ L T E +E + SV FD S ++PA Q++ K
Sbjct: 231 VNALVTTTGDASDASRERVTKESMKIDLDASVLFDLDSDVVKPAGRQIIDRTAKQLVARK 290
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ G+ D GS + ++ L RRA + ++ + G+ P
Sbjct: 291 VSGKIEVTGYTDSSGSASHNLDLSRRRAASGAKVLGSQLSKGITLVTAGKGEADPVTSND 350
Query: 139 DEDAYAKNRRAIVFLK 154
E NRR + +K
Sbjct: 351 SEAGRRLNRRVTITVK 366
>gi|237746664|ref|ZP_04577144.1| peptidoglycan-associated lipoprotein [Oxalobacter formigenes
HOxBLS]
gi|229378015|gb|EEO28106.1| peptidoglycan-associated lipoprotein [Oxalobacter formigenes
HOxBLS]
Length = 167
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 1/134 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ D++ ++ L + SV+FD SY ++ V+ +L H
Sbjct: 32 SSSSADSRQVGTVDAVSTDPLNDPNGELAQKSVYFDFDSYVVKGEYQPVVDAHARYLNGH 91
Query: 80 DCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+I+G+ DE G ++ALG +RA AV G+ S+M+ S+GKE P G+
Sbjct: 92 RNRTVVIQGNTDERGGSEYNLALGQKRAEAVRKAMALMGVPDSQMEAVSFGKEKPRATGN 151
Query: 139 DEDAYAKNRRAIVF 152
+E A+A+NRRA +
Sbjct: 152 NEAAWAENRRADIV 165
>gi|156973571|ref|YP_001444478.1| hypothetical protein VIBHAR_01273 [Vibrio harveyi ATCC BAA-1116]
gi|156525165|gb|ABU70251.1| hypothetical protein VIBHAR_01273 [Vibrio harveyi ATCC BAA-1116]
Length = 318
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 42/101 (41%), Gaps = 1/101 (0%)
Query: 54 FDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F +S +++P L + + E + + G+ D G + + +RA +V +
Sbjct: 209 FALNSTTLKPESAAKLDDLVAFLNEYPQANVDVIGYTDTSGPAAYNQKVSEKRAESVAHA 268
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +GI A R+ G+ P + +NRR V +
Sbjct: 269 LIEKGIDADRIHARGEGENNPIASNETREGREQNRRVEVVV 309
>gi|119356691|ref|YP_911335.1| OmpA/MotB domain-containing protein [Chlorobium phaeobacteroides
DSM 266]
gi|119354040|gb|ABL64911.1| OmpA/MotB domain protein [Chlorobium phaeobacteroides DSM 266]
Length = 152
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/151 (29%), Positives = 70/151 (46%), Gaps = 9/151 (5%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIR 62
+IFI + + + +GD VF+D +R
Sbjct: 8 LKSIFI--PGMLFLGACCCEK-----DVVVAPPPPPPPPVVVEPGLGD-VFYDYDKSELR 59
Query: 63 PADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS 121
++ L +W++++ +IEGH DE G+ ++ALG RRA + +Y V G+ +
Sbjct: 60 MDAVEQLKTNAAWMQRNAASSVVIEGHCDERGTNEYNLALGERRANSAKDYIVNLGVDGA 119
Query: 122 RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
RMK SYG+E P GHDE ++A+NRRA
Sbjct: 120 RMKTVSYGEERPFALGHDEASWAQNRRAHFV 150
>gi|297181726|gb|ADI17907.1| flagellar motor protein [uncultured Desulfobacterales bacterium
HF0200_07G10]
Length = 524
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 53/139 (38%), Gaps = 5/139 (3%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCD 82
+ + + L+ + + + V + F + +++ + VL + + + D
Sbjct: 386 SEISGMAEEADLDVDTSKSKVIVRVPGASLFKPAQATLQLSARPVLDAVINTVNKYPDYK 445
Query: 83 FLIEGHAD----ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
++GH D ++ L RA AV YF+ +G RM T Y P V
Sbjct: 446 IHVQGHTDDDPISTAMFPTNWELSAARATAVLRYFIDKGADPERMTATGYADIFPLVSNE 505
Query: 139 DEDAYAKNRRAIVFLKGCR 157
AKNRR L+ +
Sbjct: 506 TPYGRAKNRRVEFVLEKEK 524
>gi|302037673|ref|YP_003797995.1| flagellar motor protein MotB [Candidatus Nitrospira defluvii]
gi|300605737|emb|CBK42070.1| Flagellar motor protein MotB [Candidatus Nitrospira defluvii]
Length = 259
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 40/115 (34%), Gaps = 5/115 (4%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
S+ +S+ F + +RP + L +L L + D I GH D + S+
Sbjct: 121 IMISLPESILFTSGEARVRPEALPFLKSLAQILIEMDRHVRILGHTDNVPIRTAQFPSNW 180
Query: 100 ALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA V F + T + P + KNRR + +
Sbjct: 181 ELSAVRAVMVVRIFSELYEVPISHLSATGFADSKPVATNDTPEGRTKNRRVEIII 235
>gi|299067718|emb|CBJ38927.1| Peptidoglycan-associated lipoprotein, protein pal, component of
tol-pal system [Ralstonia solanacearum CMR15]
Length = 171
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/119 (34%), Positives = 68/119 (57%), Gaps = 1/119 (0%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELG 93
++ L + S SV+FD SY+++P +L+ +L+ H LI+G+ DE G
Sbjct: 52 VSRDELTDPNSPLAKRSVYFDFDSYAVKPEYQGLLTQHAHYLQSHNQRKVLIQGNTDERG 111
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ ++ALG +RA AV + G+ S+M+ S GKE P GHDE+++A+NRR+ +
Sbjct: 112 TSEYNLALGQKRAEAVRRALSSLGVPDSQMESVSLGKEKPQASGHDEESWAQNRRSDIV 170
>gi|170737617|ref|YP_001778877.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
MC0-3]
gi|169819805|gb|ACA94387.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3]
Length = 170
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 54/152 (35%), Gaps = 6/152 (3%)
Query: 9 ILSAITMMSISGID-----NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRP 63
L ++ L + + F + + FD Y+++P
Sbjct: 17 ALLLCMLLVGCQTPPPLHRGLTQTQVTALKSAGFQETGQGFEFGSTEPILFDFDRYNLKP 76
Query: 64 ADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASR 122
+++ +G L + + G++D+ G+ L RRA V V G+ A R
Sbjct: 77 DVRRIVERIGRTLRSAGINGVRVYGYSDDEGTAAYDAELSRRRAEVVAVELVDVGLDAKR 136
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ + GK P A+NRRA + +
Sbjct: 137 IAIVGKGKLDPVGDNRTPAGRAQNRRAAIVVS 168
>gi|315637845|ref|ZP_07893035.1| fibronectin-binding protein [Campylobacter upsaliensis JV21]
gi|315482086|gb|EFU72700.1| fibronectin-binding protein [Campylobacter upsaliensis JV21]
Length = 327
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/135 (24%), Positives = 54/135 (40%), Gaps = 1/135 (0%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW- 75
++S + I + ++ F+ +I PA + N+
Sbjct: 186 AVSRTSSKVKAICPVQPREGALLDENGCEKTISLEGHFEFDKTTINPAFESRIQNIAKVL 245
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
E + ++EGH D GSR + L RRA V N + GI SR++V YG++ P
Sbjct: 246 EENEKYNTILEGHTDNTGSRAYNQKLSERRAQRVANELMKFGIEKSRIEVKGYGQDKPRS 305
Query: 136 YGHDEDAYAKNRRAI 150
++ A NRR
Sbjct: 306 SNETKEGRADNRRVE 320
>gi|41059077|gb|AAR98873.1| outer membrane protein [Helicobacter pylori]
Length = 179
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/174 (22%), Positives = 70/174 (40%), Gaps = 24/174 (13%)
Query: 1 MQYSTIFIILSAITMMSIS----------GIDNLDTKISSPDTVLNESSLQEQFSSSVG- 49
M+ S++F L A ++ G + S+P + QE
Sbjct: 1 MKRSSVFSFLVAFLFIAGCKHNMDKETVAGDVSAKAVQSAPVSTETAQEKQEPKQEPAPV 60
Query: 50 -------------DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRN 96
S++FD Y I+ +D + L + +++ L+EG+ DE GS
Sbjct: 61 VEEKPAVESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEFGSSE 120
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
+ ALG++R +V N V +G+ +K S+G+ P + Y +NRR
Sbjct: 121 YNQALGVKRTLSVKNALVIKGVEKDMIKTISFGETKPKCTQKTRECYRENRRVD 174
>gi|1170998|sp|P46827|YTXE_BACME RecName: Full=Uncharacterized 24.6 kDa protein in ccpA 3'region;
AltName: Full=ORF2
gi|415666|gb|AAA22297.1| homologue to motB; ORF2; putative [Bacillus megaterium]
Length = 218
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 42/130 (32%), Gaps = 5/130 (3%)
Query: 34 VLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG 93
V+ + + + V F+T I L LG D +EGH D
Sbjct: 88 VITAKRDERGVVLILQEQVLFETGQADILKKGTPFLDELGRLFSTIPNDIKVEGHTDNRP 147
Query: 94 SRNS----SIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
+ L RA V Y SA+R + YG P V D KNRR
Sbjct: 148 IHTYAYPSNWELSAARASGVIRYLTNHFSLSANRFEALGYGDTKPLVPNTSNDNLQKNRR 207
Query: 149 AIVFLKGCRA 158
+ + A
Sbjct: 208 VEIIISDPEA 217
>gi|21111774|gb|AAM40073.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66575109|gb|AAY50519.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
Length = 431
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 45/123 (36%), Gaps = 7/123 (5%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRN 96
+ ++ D + FD IRP +VL L + + + GH D G +
Sbjct: 309 PGAPCGYVITLSDRILFDFDKADIRPDAARVLDTLAAALGKVSVAQMEVRGHTDAKGGDD 368
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG-----HDEDAYAKNRRAIV 151
+ AL RRA AV RG A YG+ P + NRR +
Sbjct: 369 YNQALSERRANAVLAALRTRGT-AQSASAKGYGESQPLAPNTVKGQDNPGGRQLNRRVEL 427
Query: 152 FLK 154
FL+
Sbjct: 428 FLR 430
>gi|52842007|ref|YP_095806.1| flagellar motor protein MotD [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52629118|gb|AAU27859.1| flagellar motor protein MotB [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 273
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 60/143 (41%), Gaps = 5/143 (3%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQF-SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
G+D L+ +S + + + QE + + FD+ S I+P + L L ++
Sbjct: 94 GLDELNKSLSELEDGDFKLNRQEGWVEIDIKAGSLFDSGSADIKPEALIKLMKLAEKIKN 153
Query: 79 HDCDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
++EG+ D + S+ L RA V GI+ R+ VT YG + P
Sbjct: 154 LPFTVVVEGYTDNVPIETPQYPSNWELSAARAATVGRILNGFGIANHRILVTGYGDQYPI 213
Query: 135 VYGHDEDAYAKNRRAIVFLKGCR 157
+ E ++NRR + + R
Sbjct: 214 TDNYTEAGRSQNRRVNILITKNR 236
>gi|77747768|ref|NP_636149.2| hypothetical protein XCC0758 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|77761295|ref|YP_244539.2| hypothetical protein XC_3475 [Xanthomonas campestris pv. campestris
str. 8004]
Length = 403
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 45/123 (36%), Gaps = 7/123 (5%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRN 96
+ ++ D + FD IRP +VL L + + + GH D G +
Sbjct: 281 PGAPCGYVITLSDRILFDFDKADIRPDAARVLDTLAAALGKVSVAQMEVRGHTDAKGGDD 340
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG-----HDEDAYAKNRRAIV 151
+ AL RRA AV RG A YG+ P + NRR +
Sbjct: 341 YNQALSERRANAVLAALRTRGT-AQSASAKGYGESQPLAPNTVKGQDNPGGRQLNRRVEL 399
Query: 152 FLK 154
FL+
Sbjct: 400 FLR 402
>gi|71892117|ref|YP_277849.1| Pal [Candidatus Blochmannia pennsylvanicus str. BPEN]
gi|71796223|gb|AAZ40974.1| Pal [Candidatus Blochmannia pennsylvanicus str. BPEN]
Length = 175
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 47/175 (26%), Positives = 80/175 (45%), Gaps = 21/175 (12%)
Query: 1 MQYSTIF----------IILSAITMMSISGIDNLDTKISSPDT----------VLNESSL 40
M+ + F I+++A + +S + K + V++E
Sbjct: 1 MKPNNFFKQLISAISVSIVITACSSLSQYDTVTPNQKKVELNHFNHTNIKNSRVIDEQIQ 60
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSI 99
+ + ++F Y I L+ ++ IEGHADE G+ +I
Sbjct: 61 LKTQELKSNNVIYFPLDQYDIPSNFFYSLNIHANFLYNNPLQHIKIEGHADERGTPEYNI 120
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
ALG RRA +V +Y ++G+ + +M SYGKE P+V G +E+AY+KNRR ++ K
Sbjct: 121 ALGERRANSVKSYLQSKGVLSEQMLTISYGKEKPAVLGQNEEAYSKNRRVVLIYK 175
>gi|153831721|ref|ZP_01984388.1| outer membrane protein OmpA [Vibrio harveyi HY01]
gi|148872231|gb|EDL71048.1| outer membrane protein OmpA [Vibrio harveyi HY01]
Length = 321
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+V F S ++ + I G++D GS + L +RA AV
Sbjct: 208 TVQFGLESAELQ-DASAFNGTVELMNTYPQAQVEINGYSDTTGSEAYNQQLTEKRAQAVA 266
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
+F A GI+A RM V G+ P + +NRR V + + T
Sbjct: 267 EHFQAEGIAADRMTVKGMGEANPVASNETREGREENRRVEVVVPAFQYQT 316
>gi|157369523|ref|YP_001477512.1| peptidoglycan-associated outer membrane lipoprotein [Serratia
proteamaculans 568]
gi|157321287|gb|ABV40384.1| Peptidoglycan-associated lipoprotein [Serratia proteamaculans 568]
Length = 171
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/124 (35%), Positives = 65/124 (52%), Gaps = 1/124 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGH 88
S + E + + + V+F Y + Q+L + +EGH
Sbjct: 47 SSNLSSEEQARLQMQELQKNNIVYFGLDKYDVSSEFAQMLDAHAAFLRNNPSYKVTVEGH 106
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
ADE G+ +IALG RR+ +V Y +G+SA ++ + SYGKE P+V GHDE AYAKNRR
Sbjct: 107 ADERGTPEYNIALGERRSNSVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYAKNRR 166
Query: 149 AIVF 152
A++
Sbjct: 167 AVLV 170
>gi|117621021|ref|YP_857806.1| flagellar motor protein MotB [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117562428|gb|ABK39376.1| sodium-driven polar flagellar protein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 299
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 51/143 (35%), Gaps = 5/143 (3%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+++ K D + +L +Q + + F S ++P V+ + + L
Sbjct: 141 ALAKALADQMKAQIQDGAIEVEALGQQIIIRIREKAAFPAGSAFLQPQFWPVVRKVAALL 200
Query: 77 EKHDCDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKE 131
+ + I GH D+ + S+ L +RA AV + + R+ V
Sbjct: 201 KDVPGEITISGHTDDAATEDELFQSNWELSSQRAVAVAHQMIKVPGFDGGRLVVQGMADS 260
Query: 132 MPSVYGHDEDAYAKNRRAIVFLK 154
P V + NRR + +
Sbjct: 261 QPLVPNTSPENRRMNRRVEISIM 283
>gi|54294667|ref|YP_127082.1| flagellar motor protein MotD [Legionella pneumophila str. Lens]
gi|53754499|emb|CAH15983.1| hypothetical protein lpl1744 [Legionella pneumophila str. Lens]
Length = 273
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 60/143 (41%), Gaps = 5/143 (3%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQF-SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
G+D L+ +S + + + QE + + FD+ S I+P + L L ++
Sbjct: 94 GLDELNKSLSELEDGDFKLNRQEGWVEIDIKAGSLFDSGSADIKPEALIKLMKLAEKIKN 153
Query: 79 HDCDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
++EG+ D + S+ L RA V GI+ R+ VT YG + P
Sbjct: 154 LPFTVVVEGYTDNVPIETPQYPSNWELSAARAATVGRILNGFGIANHRILVTGYGDQYPI 213
Query: 135 VYGHDEDAYAKNRRAIVFLKGCR 157
+ E ++NRR + + R
Sbjct: 214 TDNYTEAGRSQNRRVNILITKNR 236
>gi|117923780|ref|YP_864397.1| OmpA/MotB domain-containing protein [Magnetococcus sp. MC-1]
gi|117607536|gb|ABK42991.1| OmpA/MotB domain protein [Magnetococcus sp. MC-1]
Length = 203
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 1/134 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-WLEK 78
G + + + + +FF S ++ VL+ ++
Sbjct: 68 GSQYKSGSYYDEQSAAGSAGGTQDPMGQPENMIFFGYDSEALTYEAQTVLAQHAVAIIKG 127
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
IEGH DE G+R ++ALG +RA +V N+ A+G+ + M+ SYGKE P GH
Sbjct: 128 GVQSVSIEGHCDERGTREYNLALGQKRADSVKNFLNAQGVPTTVMRTVSYGKERPLYTGH 187
Query: 139 DEDAYAKNRRAIVF 152
E ++A+NRRA++
Sbjct: 188 TETSWARNRRAVLV 201
>gi|325103802|ref|YP_004273456.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
gi|324972650|gb|ADY51634.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
Length = 633
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 1/107 (0%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
+ ++FFDT+ Y I+ L+ L + E + I+GH D +G ++ L RA
Sbjct: 524 ILKNIFFDTNKYDIKDDSKSELAILIDFLNENKTVNIEIQGHTDNIGDDKANFVLSENRA 583
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+V Y V GI + R++ +G+ P + A NRR +
Sbjct: 584 KSVLKYLVNEGIDSKRLRYKGFGETAPIDSNDNIIGRANNRRTEFLI 630
>gi|291437526|ref|ZP_06576916.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
gi|291340421|gb|EFE67377.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
Length = 218
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 22/140 (15%), Positives = 44/140 (31%), Gaps = 2/140 (1%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
++ + ++ + ++ V F S + ++ +
Sbjct: 71 ATLAEPKVLDIKQVVEDQSGDERREDTNSDVKFALQAEVLFGKDSAKLGAQAKARIATIA 130
Query: 74 SWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKE 131
++ + + G D LGS L +RA AV + +V YG++
Sbjct: 131 EEIKTQNATRIRVFGFTDNLGSSAHGDVLSRQRANAVHGVLEQELNDSDVTYEVRGYGEQ 190
Query: 132 MPSVYGHDEDAYAKNRRAIV 151
P E KNRR +
Sbjct: 191 YPIADNSTEAGRKKNRRVEI 210
>gi|254490152|ref|ZP_05103343.1| peptidoglycan-associated lipoprotein, putative [Methylophaga
thiooxidans DMS010]
gi|224464638|gb|EEF80896.1| peptidoglycan-associated lipoprotein, putative [Methylophaga
thiooxydans DMS010]
Length = 188
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/187 (22%), Positives = 79/187 (42%), Gaps = 32/187 (17%)
Query: 1 MQYSTIFIILSAITMMSISGID-------------------------------NLDTKIS 29
M+ +F +L + ++ +TK+
Sbjct: 1 MKMLKLFAVLLPMLWLAACSSSPEKGMEGDVAVEDLSAETAGVRGQGADGEDMGAETKVV 60
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGH 88
+ + L + S V+F+ S ++R D + L + +K + +EGH
Sbjct: 61 VGEDQYMGNELNDPSSPLSNRVVYFEYDSATVRVEDQETLQAHAAYLAKKPNLTLRLEGH 120
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
DE G+R ++ALG RRA ++ + +G S ++ +VTS+G+E P+ G E A+++NRR
Sbjct: 121 TDERGAREYNLALGERRALSIRQILMLQGASINQFQVTSFGEERPAEEGSSEYAWSQNRR 180
Query: 149 AIVFLKG 155
+ G
Sbjct: 181 VELVYIG 187
>gi|90413724|ref|ZP_01221712.1| Putative OmpA family protein [Photobacterium profundum 3TCK]
gi|90325193|gb|EAS41690.1| Putative OmpA family protein [Photobacterium profundum 3TCK]
Length = 241
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 52/135 (38%), Gaps = 1/135 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
+ + T ++ + + ++ + + F + + L N+ +++D
Sbjct: 104 VQETKLRQQLESTGISVTRDGDNIVLNMPNEITFGIDQSDLSSRAVAALKNVALVAKEYD 163
Query: 81 CD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ G D GS + + L RA V + + G++A+R+ G+ P
Sbjct: 164 KTLINVYGFTDSTGSASYNQRLSQVRASEVSSNLMRGGVAANRVITKGMGEAKPIASNKT 223
Query: 140 EDAYAKNRRAIVFLK 154
E A+NRR + L
Sbjct: 224 EQGRAENRRVEIVLS 238
>gi|88802038|ref|ZP_01117566.1| outer membrane protein [Polaribacter irgensii 23-P]
gi|88782696|gb|EAR13873.1| outer membrane protein [Polaribacter irgensii 23-P]
Length = 450
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 61/137 (44%), Gaps = 4/137 (2%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS-NLGSWL 76
+ + ++ P+ + NE+ + + +++ F S + + + L L
Sbjct: 315 CPTVAGIASEGGCPEVITNEA---KMGMDTFAEAILFTLESANFQRGVRKDLDGMLAIIN 371
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
E +F I G+ D GS + ++ L RA AV +Y V GI A+R+ V +G+E P+
Sbjct: 372 EFPQANFAIRGYTDVSGSVSGNLKLSNSRANAVKDYLVKNGIDAARLTVAGFGQESPTAS 431
Query: 137 GHDEDAYAKNRRAIVFL 153
+NRR V +
Sbjct: 432 NKTRAGRIQNRRVEVKV 448
>gi|254519411|ref|ZP_05131467.1| chemotaxis motB protein [Clostridium sp. 7_2_43FAA]
gi|226913160|gb|EEH98361.1| chemotaxis motB protein [Clostridium sp. 7_2_43FAA]
Length = 246
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 49/127 (38%), Gaps = 5/127 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+V++ + + D+V F+TSS +R +VL+ + S + D L+EGH D
Sbjct: 112 GSVVDIIDNKRGVIIQLRDNVLFETSSSDLREESKEVLNKINSLIASIDNQILVEGHTDN 171
Query: 92 LGSRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S R V + G SR YG+ P + AKN
Sbjct: 172 RPINTSRFPSNWELSADRAVNVVKYFIEVMGQDPSRFSAAGYGEYHPVAPNDTYENMAKN 231
Query: 147 RRAIVFL 153
RR + +
Sbjct: 232 RRVDILI 238
>gi|218885327|ref|YP_002434648.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218756281|gb|ACL07180.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 345
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 44/107 (41%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLR 104
V S+ F +S + +L + L+ + GH LG+ + L
Sbjct: 235 EVIVLRSIQFALNSAKLDATATSILVETAAILKSKKGSVEVAGHTCSLGTDEYNQKLSEA 294
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA +V ++ V +G+ +SR+ YG+ P E+ NRR +
Sbjct: 295 RAKSVKDFLVKQGVESSRLITKGYGESKPKYDNSTEETRKLNRRVEL 341
>gi|206891094|ref|YP_002249885.1| peptidoglycan-associated lipoprotein [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|206743032|gb|ACI22089.1| peptidoglycan-associated lipoprotein [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 182
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 45/177 (25%), Positives = 73/177 (41%), Gaps = 26/177 (14%)
Query: 1 MQYSTIFIILSAITMMSISGIDN---------------------LDTKISSPDTVLNESS 39
M+ I + + + ++ TK S +T S
Sbjct: 1 MKIKIILLAIFCLFLIIACAERKIYMPDGKETTGIVKKEEGNEIEKTKPSEEETSFTTSQ 60
Query: 40 LQE---QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
+ E + +GD + FD Y +R D+ L + S+ + +IEGH DE G+
Sbjct: 61 MAELIKKLQEEIGD-IHFDYDKYDVRQDDLPTLKKVASYLQKYPKLRVIIEGHCDERGTN 119
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ ALG +RA + Y + GI +SR+ + SYG+E P +E + KNRRA
Sbjct: 120 EYNFALGQKRADSAKQYLITLGIISSRIDIISYGEEKPLCTEQNESCWQKNRRAHFV 176
>gi|183222506|ref|YP_001840502.1| hypothetical protein LEPBI_I3161 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189912543|ref|YP_001964098.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167777219|gb|ABZ95520.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167780928|gb|ABZ99226.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 475
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 51/131 (38%), Gaps = 3/131 (2%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-F 83
D + + + ++ S+ DS+ FD + ++ ++ + L+K+
Sbjct: 343 DPNQIAEQLPVKVRTTEDGIVFSL-DSILFDFNDSKLKVDAESAVAKIAEILKKYPDREI 401
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDA 142
+ GH D +G + + L RA +V + V + + Y E P E+
Sbjct: 402 RVSGHTDNIGKKEYNQKLSEERAKSVLHSLVDNHKMDEKHISFRGYADEFPVAPNDSEEN 461
Query: 143 YAKNRRAIVFL 153
KNRR + L
Sbjct: 462 RHKNRRVEITL 472
>gi|33603081|ref|NP_890641.1| putative outer membrane protein [Bordetella bronchiseptica RB50]
gi|33568712|emb|CAE34470.1| putative outer membrane protein [Bordetella bronchiseptica RB50]
Length = 215
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 55/133 (41%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
++ +S + ++ +V FDT ++PA + VL ++ + +
Sbjct: 78 QDVQQSGASSLGIDVVEMPDGSLKVNIPSNVSFDTDKSQLKPALLPVLDSVARALNQHPE 137
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ GH D GS + L + RA AV +Y +G++ RM V G P
Sbjct: 138 LRTKVVGHTDSTGSAAHNQQLSVNRARAVTSYLGKQGVAQGRMTVEGRGANDPVGDNATA 197
Query: 141 DAYAKNRRAIVFL 153
+ A NRR V+L
Sbjct: 198 EGRAANRRVEVYL 210
>gi|254251112|ref|ZP_04944430.1| hypothetical protein BDAG_00285 [Burkholderia dolosa AUO158]
gi|124893721|gb|EAY67601.1| hypothetical protein BDAG_00285 [Burkholderia dolosa AUO158]
Length = 431
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 41/125 (32%), Gaps = 4/125 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
VL + + F + ++ P +L + + + L+ GH D
Sbjct: 305 GVLTVDEDERRSIVVFKGDSMFASGQSTVLPGIEPILDKVAREVARVGGTVLVTGHTDNQ 364
Query: 93 GS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
+++AL +RA V G A R++ G P A NRR
Sbjct: 365 PIRSAAFANNLALSEKRAAYVAQILQRDGTPAERIRAVGKGDTQPVGDNATAAGRALNRR 424
Query: 149 AIVFL 153
+ +
Sbjct: 425 VEIMV 429
>gi|311106778|ref|YP_003979631.1| motility protein B 2 [Achromobacter xylosoxidans A8]
gi|310761467|gb|ADP16916.1| motility protein B 2 [Achromobacter xylosoxidans A8]
Length = 320
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 56/147 (38%), Gaps = 4/147 (2%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVL 69
+ A + + ++ ++ S + + + F + ++ P + V+
Sbjct: 149 VVAEAAPPLRAPSKESLGLGDLGKSVDVIINEQSVSFRISNELLFPSGQATLSPTGLDVI 208
Query: 70 SNLGSWLEKHDCDFLIEGHADELGSRNSS----IALGLRRAYAVFNYFVARGISASRMKV 125
L + L K++ +EGH+D + + L RA +V V G+SA R++
Sbjct: 209 KRLAAILNKNEYQVSVEGHSDPVPIQTRQFASNWELSSSRATSVLRELVRDGVSAQRLRA 268
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVF 152
Y + P + A NRR +
Sbjct: 269 VGYAETRPIESNDTQAGRAANRRVELI 295
>gi|89893041|ref|YP_516528.1| hypothetical protein DSY0295 [Desulfitobacterium hafniense Y51]
gi|89332489|dbj|BAE82084.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 264
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 46/128 (35%), Gaps = 6/128 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHAD 90
L +E S+ D FD+ S ++ ++ + L ++ + + GH D
Sbjct: 122 SAQLETRITEEMLMISIRDYALFDSGSALVKTEAQKLAYIISDILRQYPGYNVEVAGHTD 181
Query: 91 ELGSRNSSIAL-----GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
L + R + + G+ SR + YG+ P E+ AK
Sbjct: 182 NLPINTAEFPTNWDLSSRRSLNFMKYLLQSDGLDQSRFRSIGYGEFQPIATNTTEEGRAK 241
Query: 146 NRRAIVFL 153
NRR V +
Sbjct: 242 NRRVEVNI 249
>gi|294636572|ref|ZP_06714935.1| OmpA family protein [Edwardsiella tarda ATCC 23685]
gi|291090190|gb|EFE22751.1| OmpA family protein [Edwardsiella tarda ATCC 23685]
Length = 162
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 22/148 (14%), Positives = 56/148 (37%), Gaps = 1/148 (0%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQ 67
+++ + + + + + + +S + + V F + + +RP
Sbjct: 13 VLIGGMALSGCQRKETFSAQQVAVLQQQGFIQGNDGWSFGMSEKVLFGNNQFVLRPESQA 72
Query: 68 VLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT 126
++ +G + ++G+ D G+ + L L+RA V + + G+ + +
Sbjct: 73 HVAEIGRALSKVAILHARLDGYTDNYGTDAYNQQLSLKRADKVADALASGGMPRANLTTR 132
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
GK P A+NRR + ++
Sbjct: 133 GMGKRDPIADNATRQGRAENRRVAIIIQ 160
>gi|145301089|ref|YP_001143930.1| outer membrane lipoprotein [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142853861|gb|ABO92182.1| outer membrane lipoprotein [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 218
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHA 89
T ++ + ++ ++ ++V FD+SS ++ A LS + + E + GH
Sbjct: 91 QGTGVSVTRNGDELILNMPNNVTFDSSSAQLKAAGANTLSGVAMVVAEFDKTRLNVVGHT 150
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GSR+ ++ L +RA AV + G++ SR+ G + P A+NRR
Sbjct: 151 DSTGSRDLNMKLSAQRADAVAAQLIGHGVTGSRISTQGVGPDQPVATNSTAAGKAQNRRV 210
Query: 150 IVFL 153
+ L
Sbjct: 211 TITL 214
>gi|90426398|ref|YP_534768.1| OmpA/MotB [Rhodopseudomonas palustris BisB18]
gi|90108412|gb|ABD90449.1| OmpA/MotB [Rhodopseudomonas palustris BisB18]
Length = 464
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 52/138 (37%), Gaps = 3/138 (2%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSV--GDSVFFDTSSYSIRPADIQVLSNLGSWL- 76
G P + ++ +Q S + + F++ +I P + +L L
Sbjct: 327 GWQVKTEVSVKPAAAPVDPTVCQQLFSDLLGKSKIRFESGRATIDPDSVGLLDRLIETAL 386
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
I GH D G + L +RA AV Y V G+ A R + YG P
Sbjct: 387 RCPTATIEIAGHTDGDGDGAFNQTLSEKRAQAVAEYMVRAGLPAERFRPVGYGSTTPVAP 446
Query: 137 GHDEDAYAKNRRAIVFLK 154
+++ A+NRR ++
Sbjct: 447 NDNDEGKAQNRRIEFMVR 464
>gi|256819872|ref|YP_003141151.1| OmpA/MotB domain-containing protein [Capnocytophaga ochracea DSM
7271]
gi|256581455|gb|ACU92590.1| OmpA/MotB domain protein [Capnocytophaga ochracea DSM 7271]
Length = 360
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 1/104 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
++ FDT ++P +L N+ E D +F++EGH D G+ ++ L RA A+
Sbjct: 252 TILFDTDKSVVKPQAEFILDNIAIIMNENPDFNFVVEGHTDNTGTPEHNLKLSQDRADAI 311
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
Y G+S R+ YG+ P E NRR + +
Sbjct: 312 KQYLSRHGVSKKRLDAKGYGQTRPIESNETERGKEINRRVEINV 355
>gi|261403961|ref|YP_003240202.1| OmpA/MotB domain-containing protein [Paenibacillus sp. Y412MC10]
gi|329930219|ref|ZP_08283832.1| chemotaxis protein MotB [Paenibacillus sp. HGF5]
gi|261280424|gb|ACX62395.1| OmpA/MotB domain protein [Paenibacillus sp. Y412MC10]
gi|328935241|gb|EGG31722.1| chemotaxis protein MotB [Paenibacillus sp. HGF5]
Length = 268
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 21/117 (17%), Positives = 40/117 (34%), Gaps = 6/117 (5%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIAL 101
Q ++ D+ F + ++P ++ + + D + ++ GH D + NS
Sbjct: 137 QLVITIRDNALFPSGEAVVKPEARKLAKAISQMLHKFPDYEIIVSGHTDNVPISNSKYPS 196
Query: 102 -----GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
R + + R YG+ P + AKNRR V +
Sbjct: 197 NWDLSSDRALQFMKILLTNSELDPKRFMPIGYGEYHPIADNNTAVGRAKNRRVEVSI 253
>gi|302536573|ref|ZP_07288915.1| type VI secretion system OmpA/MotB [Streptomyces sp. C]
gi|302445468|gb|EFL17284.1| type VI secretion system OmpA/MotB [Streptomyces sp. C]
Length = 212
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 35/117 (29%), Gaps = 2/117 (1%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRN 96
+ ++ V F +S + + + + G D+ GS
Sbjct: 89 QETNQNVMMALQSEVLFPENSAVFNAQAASRIQAIAQEINTQKATRIRVFGFTDDQGSYE 148
Query: 97 SSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
L +RA AV + V Y ++ P E+ KNRR +
Sbjct: 149 HGKELSKQRADAVQAELAKTVTNPAVTYDVRGYSEDYPIADNSTEEGRKKNRRVEIT 205
>gi|75674700|ref|YP_317121.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255]
gi|74419570|gb|ABA03769.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255]
Length = 463
Score = 76.0 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 45/126 (35%), Gaps = 1/126 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGH 88
S V Q ++ F+ ++ I +L L I GH
Sbjct: 337 SASPVDPTVCQQLFGELLEKRTIQFEAGQATLHLDSIGLLDQLTETALRCQTATIEIVGH 396
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D G + + L RRA AV ++ V G+ A+R G P ++ AKNRR
Sbjct: 397 TDSDGDASFNQTLSERRAQAVVDFLVKAGLPANRFTPMGRGSAQPIATNDTDEGKAKNRR 456
Query: 149 AIVFLK 154
++
Sbjct: 457 IDFIVR 462
>gi|149193957|ref|ZP_01871055.1| OmpA/MotB [Caminibacter mediatlanticus TB-2]
gi|149135910|gb|EDM24388.1| OmpA/MotB [Caminibacter mediatlanticus TB-2]
Length = 256
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 21/141 (14%), Positives = 46/141 (32%), Gaps = 9/141 (6%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPA----DIQVLSNLGSWL 76
+ + + + +E F + + F S I ++ ++ +
Sbjct: 97 TEFKEMTQAGKGNAITLQEGEEGFFIRLPADITFAPGSAEITNQDSLLFLKRIAIIIKEY 156
Query: 77 EKHDCDFLIEGHADE-----LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
+ D I G+ D + L RA +V + G+ ++ +YG+
Sbjct: 157 LPKNIDIQIRGYTDNLPPPKNSPYRDNWDLSAARALSVLKILIKDGVDPKQLSAAAYGEY 216
Query: 132 MPSVYGHDEDAYAKNRRAIVF 152
P + KNRR ++
Sbjct: 217 HPIASNLTPEGRDKNRRVEIW 237
>gi|322830754|ref|YP_004210781.1| OmpA/MotB domain protein [Rahnella sp. Y9602]
gi|321165955|gb|ADW71654.1| OmpA/MotB domain protein [Rahnella sp. Y9602]
Length = 220
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 61/124 (49%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FDT+S +++PA L+ + L+++ + G+ D
Sbjct: 94 GTGVSVTRQGDNIVLNMPNNVTFDTNSSTLKPAGANTLTGVAMVLKEYPKTAVNVIGYTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G+R ++ L +RA V + + +G+ SR+ T G + P E A+NRR
Sbjct: 154 STGTRALNMKLSQQRADGVGSALITQGVEGSRVHTTGAGPDNPIAGNSTEAGKAQNRRVE 213
Query: 151 VFLK 154
+ L
Sbjct: 214 ITLS 217
>gi|296127617|ref|YP_003634869.1| OmpA/MotB domain protein [Brachyspira murdochii DSM 12563]
gi|296019433|gb|ADG72670.1| OmpA/MotB domain protein [Brachyspira murdochii DSM 12563]
Length = 403
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 53/125 (42%), Gaps = 4/125 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL--GSWLEKHDCDFLIEGHA 89
D + ++ E +G+ + FDT SY++RP + N+ D + ++EGH
Sbjct: 279 DDNVTIDTVPEGLVVRLGE-ILFDTDSYTLRPEAKNTIDNIVKAIKETYPDREIIVEGHT 337
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G + + L +RA +V +Y + ++ E P D KNRR
Sbjct: 338 DNTGRKEYNQELSEKRAKSVADYILPNLEH-DKLSYKGLADEEPIASNDTADGRQKNRRV 396
Query: 150 IVFLK 154
+ +K
Sbjct: 397 DIIIK 401
>gi|253991260|ref|YP_003042616.1| outer membrane protein, ompa/motb family [Photorhabdus asymbiotica
subsp. asymbiotica ATCC 43949]
gi|211638308|emb|CAR66931.1| outer membrane protein, ompa/motb family [Photorhabdus asymbiotica
subsp. asymbiotica ATCC 43949]
gi|253782710|emb|CAQ85875.1| outer membrane protein, ompa/motb family [Photorhabdus asymbiotica]
Length = 387
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 48/130 (36%), Gaps = 4/130 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ + S + S ++ F ++S ++ P L L L ++
Sbjct: 248 QPMIEQQDITVSQNADNVSVTLQGGGLFASASATLNPLYQTPLQELAKQLNLTTGKVIVR 307
Query: 87 GHADE----LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
GH+D + +S+ AL L RA V + R++V S G E P V
Sbjct: 308 GHSDNLPIHTHTYSSNYALSLARAETVAQQLRTNLLQPQRLQVESAGAEAPLVPNTTAKN 367
Query: 143 YAKNRRAIVF 152
A NRR +
Sbjct: 368 RALNRRIEII 377
>gi|51246518|ref|YP_066402.1| flagellar motor protein (MotB) [Desulfotalea psychrophila LSv54]
gi|50877555|emb|CAG37395.1| related to flagellar motor protein (MotB) [Desulfotalea
psychrophila LSv54]
Length = 249
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 47/118 (39%), Gaps = 4/118 (3%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG---SRNS 97
++ + D V F I P +L N+ + + IEGH+D++ + +
Sbjct: 120 KDIIILRMDDKVLFARGQSEISPRSYMLLRNIADIIRPLPVNVRIEGHSDDIPLGINNIA 179
Query: 98 SIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ L RA + +F + + R+ YG P E+ AKNRR L+
Sbjct: 180 NWNLSTSRAVSALRFFYRGNLISLDRLSAIGYGDMHPIAPNTTEENRAKNRRVDFVLR 237
>gi|37679056|ref|NP_933665.1| flagellar motor protein MotB [Vibrio vulnificus YJ016]
gi|326423687|ref|NP_759314.2| flagellar motor rotation protein motB [Vibrio vulnificus CMCP6]
gi|37197798|dbj|BAC93636.1| flagellar motor protein [Vibrio vulnificus YJ016]
gi|319999044|gb|AAO08841.2| Flagellar motor rotation protein motB [Vibrio vulnificus CMCP6]
Length = 318
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 47/128 (36%), Gaps = 5/128 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ +L +Q + + F S ++P ++ + ++ I GH D
Sbjct: 174 QGAIEVENLGQQIVIRMREKGAFPEGSAFLQPKFRPLVRQIAELVKDVPGIVRISGHTDN 233
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S+ L +RA +V RG S R++V P V E+ A+N
Sbjct: 234 QRLDSELYRSNWDLSAQRAVSVAQEMEKVRGFSHQRLRVRGMADTDPLVDNDTEENRARN 293
Query: 147 RRAIVFLK 154
RR + +
Sbjct: 294 RRVEISIM 301
>gi|300770385|ref|ZP_07080264.1| lipoprotein PG3 [Sphingobacterium spiritivorum ATCC 33861]
gi|300762861|gb|EFK59678.1| lipoprotein PG3 [Sphingobacterium spiritivorum ATCC 33861]
Length = 230
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 53/133 (39%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHD 80
D +I + E + + FD + ++ + +S + + ++ D
Sbjct: 83 DKQAAEIENTVAGAEVIKSDEGIIVKFDEGILFDFNKSDLKASAKTNISKLVATLNKEPD 142
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
L+ GH D +GS ++ + RA AV Y V++G++ R+ P +
Sbjct: 143 TKILVIGHTDNIGSLAANQKVSEARAAAVKTYAVSQGLNGGRINTEGKNYSEPLASNDTD 202
Query: 141 DAYAKNRRAIVFL 153
A+NRR + +
Sbjct: 203 AGRAENRRVEIVI 215
>gi|148359324|ref|YP_001250531.1| flagellar motor protein MotB [Legionella pneumophila str. Corby]
gi|296107371|ref|YP_003619071.1| flagellar motor protein [Legionella pneumophila 2300/99 Alcoy]
gi|148281097|gb|ABQ55185.1| flagellar motor protein MotB [Legionella pneumophila str. Corby]
gi|295649272|gb|ADG25119.1| flagellar motor protein [Legionella pneumophila 2300/99 Alcoy]
Length = 267
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 60/143 (41%), Gaps = 5/143 (3%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQF-SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
G+D L+ +S + + + QE + + FD+ S I+P + L L ++
Sbjct: 88 GLDELNKSLSELEDGDFKLNRQEGWVEIDIKAGSLFDSGSADIKPEALIKLMKLAEKIKN 147
Query: 79 HDCDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
++EG+ D + S+ L RA V GI+ R+ VT YG + P
Sbjct: 148 LPFTVVVEGYTDNVPIETPQYPSNWELSAARAATVGRILNGFGIANHRILVTGYGDQYPI 207
Query: 135 VYGHDEDAYAKNRRAIVFLKGCR 157
+ E ++NRR + + R
Sbjct: 208 TDNYTEAGRSQNRRVNILIAKNR 230
>gi|260062002|ref|YP_003195082.1| outer membrane protein OmpA [Robiginitalea biformata HTCC2501]
gi|88783564|gb|EAR14735.1| outer membrane protein OmpA [Robiginitalea biformata HTCC2501]
Length = 375
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 40/104 (38%), Gaps = 1/104 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+ F+ ++ + A + L + L + GH D G+ + L +R AV
Sbjct: 262 LLFEFDAHQLTDAGKEALHRVYDALRSDLSLFLELRGHTDSRGAPAYNQQLSEQRCRAVA 321
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
Y G+ + R++ +G P E +NRR ++
Sbjct: 322 RYLEGLGLDSVRIRWIGFGAARPVAGNSSESGRRRNRRVEFLIR 365
>gi|92116250|ref|YP_575979.1| OmpA/MotB [Nitrobacter hamburgensis X14]
gi|91799144|gb|ABE61519.1| OmpA/MotB [Nitrobacter hamburgensis X14]
Length = 463
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 45/107 (42%), Gaps = 1/107 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++ F+T ++ P I +L L I GH D G + + L RRA
Sbjct: 356 KRTIQFETGRATLDPDSIGLLDRLTETALRCPTATIEIAGHTDSDGDASFNQTLSERRAQ 415
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
AV +Y V G+ A R K YG P ++ AKNRR ++
Sbjct: 416 AVVDYLVKAGMPADRFKPMGYGSVQPIAANDTDEGKAKNRRIDFTVR 462
>gi|26987857|ref|NP_743282.1| OmpA/MotB domain protein [Pseudomonas putida KT2440]
gi|148546400|ref|YP_001266502.1| OmpA/MotB domain-containing protein [Pseudomonas putida F1]
gi|24982560|gb|AAN66746.1|AE016303_1 OmpA family protein [Pseudomonas putida KT2440]
gi|148510458|gb|ABQ77318.1| OmpA/MotB domain protein [Pseudomonas putida F1]
gi|313497483|gb|ADR58849.1| OmpA/MotB domain protein [Pseudomonas putida BIRD-1]
Length = 230
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEK--HDCDFLIEGHADELGSRNSSIALGLRRAY 107
V F+ S + +D + L+ + + L++ + GH D +GS + + L RRA+
Sbjct: 122 RDVHFEFDSARLTASDKERLNTIATRLKQEAPSARLSVSGHTDSVGSDSYNQKLSERRAH 181
Query: 108 AVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+V +Y V +S + V G+ P + A NRR + ++
Sbjct: 182 SVTDYLVESGVPRSSFVSVVGAGETQPVADNATAEGRAMNRRTEIKIQ 229
>gi|153940806|ref|YP_001391525.1| chemotaxis MotB protein [Clostridium botulinum F str. Langeland]
gi|152936702|gb|ABS42200.1| chemotaxis MotB protein [Clostridium botulinum F str. Langeland]
gi|295319551|gb|ADF99928.1| chemotaxis MotB protein [Clostridium botulinum F str. 230613]
Length = 254
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 47/118 (39%), Gaps = 5/118 (4%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RN 96
+ + D V F++ + +L+ + L+ D + + GH D
Sbjct: 117 ADGLEIDIQDVVLFNSGDAEVLKQSSALLTQISKMLKGLDNNIKVTGHTDNQPISNSKFR 176
Query: 97 SSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA V N+ G +++ + +YG+ MP E AKNRR + +
Sbjct: 177 SNWDLSAIRAINVMNFLSNIGGIPANKLSIQAYGEYMPKFDNATEAGKAKNRRVEISI 234
>gi|254253396|ref|ZP_04946714.1| Outer membrane protein [Burkholderia dolosa AUO158]
gi|124896005|gb|EAY69885.1| Outer membrane protein [Burkholderia dolosa AUO158]
Length = 317
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++ F+T S ++ P Q+L + + + + I GH D G+R S+IAL RA
Sbjct: 210 NRTIEFETGSATLTPQGRQILDQMAAALSKLQNRTVDIIGHTDNSGNRTSNIALSQARAD 269
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV Y + +GI +M T G + P + A+NRR +
Sbjct: 270 AVKGYLITKGIPPQQMTTTGVGPDQPIAPNDMAEGRARNRRIEFRV 315
>gi|82703826|ref|YP_413392.1| OmpA/MotB [Nitrosospira multiformis ATCC 25196]
gi|82411891|gb|ABB76000.1| OmpA/MotB [Nitrosospira multiformis ATCC 25196]
Length = 175
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/175 (23%), Positives = 70/175 (40%), Gaps = 21/175 (12%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISSPD--------------------TVLNESSLQE 42
+ +L + + + D T + L +
Sbjct: 1 MKKVLGVLLISLLTACASQTKQPGDADMEDRDRSRDAAAAQREGMQAEDYTSPTLNPLTD 60
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIAL 101
S S++FD SY ++ +++ + E + L++G+ DE GSR ++AL
Sbjct: 61 PNSILSKRSIYFDFDSYVVKDEFRSLVAAHAKYLREHPNARVLLQGNTDERGSREYNLAL 120
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
G RRA AV G +++ S G+E P GHDE A+A+NRR + +G
Sbjct: 121 GQRRADAVKYAMTLSGAQEGQIEAVSLGEEKPHAMGHDEAAWAENRRVDIRYQGE 175
>gi|56963749|ref|YP_175480.1| motility protein B [Bacillus clausii KSM-K16]
gi|56909992|dbj|BAD64519.1| motility protein B [Bacillus clausii KSM-K16]
Length = 252
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 41/117 (35%), Gaps = 6/117 (5%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGS----RNS 97
++ D + F + S ++ I+++ L I GH D + +S
Sbjct: 129 GLLITINDGILFASGSAELKSDSIELIEQLSAMLASDPPRYIQISGHTDNVPMGNNEFDS 188
Query: 98 SIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RAY V F +++ YG+ P + NRR V +
Sbjct: 189 NWELSSARAYNVMKLFFEYDHFEPAQLSFAGYGEYHPITSNETAEGRQANRRVEVLV 245
>gi|312884493|ref|ZP_07744197.1| putative lipoprotein [Vibrio caribbenthicus ATCC BAA-2122]
gi|309367805|gb|EFP95353.1| putative lipoprotein [Vibrio caribbenthicus ATCC BAA-2122]
Length = 222
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 54/123 (43%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
V E + + Q + + + F + S ++ + + L + +E + +IEG+ D
Sbjct: 96 SGVQVERTGENQLRLRMENGIGFSSGSSTLDNSIHKTLRGVARILVEYPETSLVIEGNTD 155
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS ++ L +RA +V Y V +G++ R G+ P ++ A NRR
Sbjct: 156 STGSDRTNQILSEKRAESVRGYLVGQGVAPGRAVSRGLGERQPICTNSTKEGRACNRRVE 215
Query: 151 VFL 153
+ +
Sbjct: 216 IKI 218
>gi|224368748|ref|YP_002602909.1| MotB1 [Desulfobacterium autotrophicum HRM2]
gi|223691464|gb|ACN14747.1| MotB1 [Desulfobacterium autotrophicum HRM2]
Length = 269
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 47/125 (37%), Gaps = 4/125 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD- 90
++N S + ++ D + F + +L+ + + L + ++GH D
Sbjct: 129 GGLVNVSESETGVVITMSDLLLFSAGEAILSEKGADILNKVTAVLAQLAYHVKVKGHTDA 188
Query: 91 ---ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
G S+ L RA AV VA G+ S + Y + P E A+NR
Sbjct: 189 SPISTGRYPSNWELSASRAAAVVKLLVASGLDPSLISAEGYAQYRPVATNDTEKGRARNR 248
Query: 148 RAIVF 152
R +
Sbjct: 249 RVEIV 253
>gi|192358872|ref|YP_001981881.1| putative agglutination protein [Cellvibrio japonicus Ueda107]
gi|190685037|gb|ACE82715.1| probable agglutination protein [Cellvibrio japonicus Ueda107]
Length = 599
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 53/133 (39%), Gaps = 3/133 (2%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-- 80
+ T L L ++ GD++F D S ++P Q L L + ++
Sbjct: 464 SDSVCPDQAPTALGRDELITDVNNLSGDALF-DVGSSVLKPGATQKLDALIAQIKNTPKV 522
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+EGH D G+ +I L RA V +Y V G+ + V +G P + E
Sbjct: 523 VGIRVEGHTDNTGTDALNIPLSKARAQRVRDYAVLNGLENIPVSVDGFGASRPVADNNTE 582
Query: 141 DAYAKNRRAIVFL 153
A NRR + +
Sbjct: 583 AGRAANRRVEISI 595
>gi|7532784|gb|AAF63228.1| outer membrane protein [Acinetobacter sp.]
Length = 368
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 53/127 (41%), Gaps = 4/127 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADE 91
L E + + VFFDT+ +I+ ++ + +E + IEGH D
Sbjct: 234 VAPPPQELTEDLNMEL--RVFFDTNKSNIKDQYKPEIAKVAEKLVEYPNATARIEGHTDN 291
Query: 92 LGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G R + L L RA +V + V + ASR+ + + P + ++ A NRR
Sbjct: 292 TGPRALNERLSLARANSVKSSLVNEYNVDASRLSTQGFAWDQPIADNNTKEGRAMNRRVF 351
Query: 151 VFLKGCR 157
+ G R
Sbjct: 352 ATITGSR 358
>gi|308449675|ref|XP_003088039.1| hypothetical protein CRE_17774 [Caenorhabditis remanei]
gi|308250191|gb|EFO94143.1| hypothetical protein CRE_17774 [Caenorhabditis remanei]
Length = 216
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 56/128 (43%), Gaps = 2/128 (1%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLI 85
+ V + + + S+ FDT+ +I+P L+ + +E + L+
Sbjct: 86 QQMQGTGVEVNRNPDGSVALIMPGSITFDTNKSTIKPNFYGTLNKVAQTLMEDNKSVILV 145
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
G+ D G+ + +I L RAY+V NY +G+ ASR+ YG + P +
Sbjct: 146 TGYTDNTGNDSINIPLSQNRAYSVANYLKGKGV-ASRIDTQGYGSQNPIADNSTAAGREQ 204
Query: 146 NRRAIVFL 153
NRR + +
Sbjct: 205 NRRVEISI 212
>gi|170699332|ref|ZP_02890380.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
gi|170135762|gb|EDT04042.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
Length = 219
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
+F T S + A L L + ++H ++G+ D GS + AL RRA AV
Sbjct: 116 YFATDSAVLTSAATAALDKLLNQQGDRHFARVEVDGYTDATGSDGHNQALSKRRADAVAG 175
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
Y G+ A T +G+ P+ + A+NRR + L+
Sbjct: 176 YLREHGLKADAFAATGHGEANPAASNDTVEGRARNRRVEISLQ 218
>gi|325926546|ref|ZP_08187862.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Xanthomonas perforans 91-118]
gi|325543054|gb|EGD14501.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Xanthomonas perforans 91-118]
Length = 400
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 47/123 (38%), Gaps = 7/123 (5%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRN 96
+ ++ D + FD IRP +VL L + + D + GH D GS +
Sbjct: 278 PGAPCGYLITLNDRILFDFDKSDIRPDAARVLDTLGAAQTKVTAKDMQVRGHTDAKGSDD 337
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG-----HDEDAYAKNRRAIV 151
+ AL RRA AV + +A YG+ P + NRR +
Sbjct: 338 YNQALSERRANAVLAA-LRARGAAQSANAKGYGESQPVAPNTLNGQDNPGGRQLNRRVEI 396
Query: 152 FLK 154
FL+
Sbjct: 397 FLR 399
>gi|262369640|ref|ZP_06062968.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
gi|262315708|gb|EEY96747.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
Length = 485
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 59/140 (42%), Gaps = 6/140 (4%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVG-----DSVFFDTSSYSIRPADIQVLSNLGS-WL 76
+DT IS + L E + ++ + V + FDT+S +I + +L +
Sbjct: 329 AVDTSISDAERALAEINPEQVRALDVATALNLQIINFDTASSTIPDVNKSILDQAAALMQ 388
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ + GH D G + L RA AV +Y + +G+ ++++ YG+E P
Sbjct: 389 KAPQVKLTVMGHTDATGDAAVNKTLSQNRAQAVVDYLIFKGVDPAQLRAIGYGQEKPIAD 448
Query: 137 GHDEDAYAKNRRAIVFLKGC 156
++ KNRR +
Sbjct: 449 NQTDEGKFKNRRIEFEVLNT 468
>gi|108808116|ref|YP_652032.1| putative OmpA family protein [Yersinia pestis Antiqua]
gi|108812385|ref|YP_648152.1| OmpA family protein [Yersinia pestis Nepal516]
gi|145599315|ref|YP_001163391.1| OmpA family protein [Yersinia pestis Pestoides F]
gi|162419405|ref|YP_001606412.1| SciP protein [Yersinia pestis Angola]
gi|165925389|ref|ZP_02221221.1| SciP protein [Yersinia pestis biovar Orientalis str. F1991016]
gi|165937006|ref|ZP_02225571.1| type VI secretion system OmpA/MotB family protein [Yersinia pestis
biovar Orientalis str. IP275]
gi|166008588|ref|ZP_02229486.1| type VI secretion system OmpA/MotB family protein [Yersinia pestis
biovar Antiqua str. E1979001]
gi|166214237|ref|ZP_02240272.1| SciP protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|167399212|ref|ZP_02304736.1| SciP protein [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167421156|ref|ZP_02312909.1| type VI secretion system OmpA/MotB family protein [Yersinia pestis
biovar Orientalis str. MG05-1020]
gi|167424473|ref|ZP_02316226.1| SciP protein [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|229838286|ref|ZP_04458445.1| putative OmpA family protein [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229895433|ref|ZP_04510605.1| putative OmpA family protein [Yersinia pestis Pestoides A]
gi|229898850|ref|ZP_04513995.1| putative OmpA family protein [Yersinia pestis biovar Orientalis
str. India 195]
gi|229902751|ref|ZP_04517868.1| putative OmpA family protein [Yersinia pestis Nepal516]
gi|270490077|ref|ZP_06207151.1| type VI secretion system OmpA/MotB family protein [Yersinia pestis
KIM D27]
gi|108776033|gb|ABG18552.1| OmpA family protein [Yersinia pestis Nepal516]
gi|108780029|gb|ABG14087.1| putative OmpA family protein [Yersinia pestis Antiqua]
gi|145211011|gb|ABP40418.1| OmpA family protein [Yersinia pestis Pestoides F]
gi|162352220|gb|ABX86168.1| SciP protein [Yersinia pestis Angola]
gi|165914869|gb|EDR33481.1| type VI secretion system OmpA/MotB family protein [Yersinia pestis
biovar Orientalis str. IP275]
gi|165922996|gb|EDR40147.1| SciP protein [Yersinia pestis biovar Orientalis str. F1991016]
gi|165992970|gb|EDR45271.1| type VI secretion system OmpA/MotB family protein [Yersinia pestis
biovar Antiqua str. E1979001]
gi|166204593|gb|EDR49073.1| SciP protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|166960645|gb|EDR56666.1| type VI secretion system OmpA/MotB family protein [Yersinia pestis
biovar Orientalis str. MG05-1020]
gi|167051716|gb|EDR63124.1| SciP protein [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167056355|gb|EDR66124.1| SciP protein [Yersinia pestis biovar Mediaevalis str. K1973002]
gi|229680198|gb|EEO76297.1| putative OmpA family protein [Yersinia pestis Nepal516]
gi|229688398|gb|EEO80469.1| putative OmpA family protein [Yersinia pestis biovar Orientalis
str. India 195]
gi|229694652|gb|EEO84699.1| putative OmpA family protein [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229701588|gb|EEO89615.1| putative OmpA family protein [Yersinia pestis Pestoides A]
gi|262366676|gb|ACY63233.1| OmpA family protein [Yersinia pestis D182038]
gi|270338581|gb|EFA49358.1| type VI secretion system OmpA/MotB family protein [Yersinia pestis
KIM D27]
gi|320014519|gb|ADV98090.1| putative OmpA family protein [Yersinia pestis biovar Medievalis
str. Harbin 35]
Length = 278
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 43/123 (34%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
++ F S ++RP I V+ + + + LI GH D +
Sbjct: 154 VSVDETSNNSKVIFKGDSMFMVGSDNVRPEMIDVIKRVAQEVHRVKGAILIVGHTDSMPI 213
Query: 95 RNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
L +RA V Y GI +++ G+ P D ++NRR
Sbjct: 214 NKPGFPNNQVLSEKRAANVARYMEQAGIPTDKIRFEGKGETQPVSSNDDATGRSQNRRVE 273
Query: 151 VFL 153
+F+
Sbjct: 274 IFV 276
>gi|327481195|gb|AEA84505.1| flagellar motor protein MotB [Pseudomonas stutzeri DSM 4166]
Length = 244
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 51/148 (34%), Gaps = 13/148 (8%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGD---------SVFFDTSSYSIRPADIQVLS 70
D +L + V + + F + + A ++V+
Sbjct: 91 AADAQPDDPQESMPTTPGMALGDDIQVIVNEGSISFRISSEILFGSGRAELEDAGLEVID 150
Query: 71 NLGSWLEKHDCDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVT 126
L L + ++EGH D L S+ L RA +V Y GI A+R+ T
Sbjct: 151 RLVPTLAANAFRIVVEGHTDNLPIQTERFPSNWELSASRASSVVRYLQLAGIEATRLSAT 210
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
Y P DE A NRR + ++
Sbjct: 211 GYADTRPLADNADERGRASNRRVELVMQ 238
>gi|319956698|ref|YP_004167961.1| ompa/motb domain protein [Nitratifractor salsuginis DSM 16511]
gi|319419102|gb|ADV46212.1| OmpA/MotB domain protein [Nitratifractor salsuginis DSM 16511]
Length = 173
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 2/134 (1%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK- 78
G T++ + + + Q+ S+S V+F T Y + P +Q + + ++K
Sbjct: 36 GGSQYGTEVPGGISSTGKYTGQDGVSASGIKMVYFSTDRYDVEPDQLQRIMSDMPKIQKL 95
Query: 79 -HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
IEG+ DE+G+ + ALGL+RA AV + V+ GI +SR+ V SYG+ P G
Sbjct: 96 ASSGKIRIEGNCDEMGTDEYNHALGLKRAKAVQSILVSNGIPSSRIDVVSYGESNPICTG 155
Query: 138 HDEDAYAKNRRAIV 151
H +AKNRR +
Sbjct: 156 HSAPCHAKNRRVEI 169
>gi|311992352|gb|ADQ26749.1| MotB-1 [Aeromonas hydrophila]
Length = 298
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 51/143 (35%), Gaps = 5/143 (3%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+++ K D + +L +Q + + F S ++P V+ + + L
Sbjct: 140 ALAKALADQMKAQIQDGAIEVEALGQQIIIRIREKAAFPAGSAFLQPQFWPVVRKVAALL 199
Query: 77 EKHDCDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKE 131
+ + + GH D+ + S+ L +RA AV + + R+ V
Sbjct: 200 KDVPGEITVSGHTDDAATEDELFQSNWELSSQRAVAVAHQMIKVPGFDGGRLVVQGMADS 259
Query: 132 MPSVYGHDEDAYAKNRRAIVFLK 154
P V + NRR + +
Sbjct: 260 QPLVPNTSPENRRMNRRVEISIM 282
>gi|229591826|ref|YP_002873945.1| flagellar motor protein MotD [Pseudomonas fluorescens SBW25]
gi|229363692|emb|CAY51066.1| putative chemotaxis protein [Pseudomonas fluorescens SBW25]
Length = 297
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 42/115 (36%), Gaps = 4/115 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ S+ F ++ ++ + S L + +EG D ++
Sbjct: 132 VEIELNSSLLFASADAMPSDQAFTIIDKVASILRPFENPIHVEGFTDNFPINTAQYPTNW 191
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L RA ++ +G++ R+ YG+ P + A+NRR ++ +
Sbjct: 192 ELSSARAASIVRMLAMQGVNPGRLASVGYGEFQPVANNATVEGRARNRRVVLVVS 246
>gi|114562640|ref|YP_750153.1| OmpA/MotB domain-containing protein [Shewanella frigidimarina NCIMB
400]
gi|114333933|gb|ABI71315.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400]
Length = 178
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/177 (23%), Positives = 82/177 (46%), Gaps = 25/177 (14%)
Query: 1 MQYSTIF-IILSAITMMSISGIDNLDTKISSPDTVLNESSLQ------------------ 41
M + +F +L A+ +M++ + + + ++ + +
Sbjct: 1 MDLNKLFKAMLVAVPLMALGACSSTSDSETDANGSMSGTGSEYGNGGIETGGVAPVLSSA 60
Query: 42 -----EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
++ + ++FD ++ + +++ G++ +E + LIEGHADE G+
Sbjct: 61 EQQRLKEQELRRQNIIYFDFDRSEVQSENAEIIQAHGNYLVEHPNVRVLIEGHADERGTP 120
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+IALG RRA A+ Y G+ S+M + SYG+E P Y ++ +AKNRR ++
Sbjct: 121 EYNIALGERRAKAIAKYLQGMGVQPSQMSIVSYGEEKPLDYSRNDTGFAKNRRGVLV 177
>gi|329895993|ref|ZP_08271251.1| Flagellar motor rotation protein MotB [gamma proteobacterium
IMCC3088]
gi|328922074|gb|EGG29437.1| Flagellar motor rotation protein MotB [gamma proteobacterium
IMCC3088]
Length = 354
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 53/125 (42%), Gaps = 6/125 (4%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+N Q+Q ++ D F + S +RP +Q+L+ +G + D + GH D +
Sbjct: 226 VNVEMDQDQIKITLADQGAFVSGSADLRPEFLQLLNRVGDSISDTDGVVTVSGHTDSIPM 285
Query: 95 -----RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
S+ L R+ +V +Y + +G + V Y +P + AKNRR
Sbjct: 286 AFSMRFKSNWDLSAARSASVADYLITQGYLGDIEVSVQGYADTVPIATNDTAEGRAKNRR 345
Query: 149 AIVFL 153
+ +
Sbjct: 346 IEIMI 350
>gi|326404482|ref|YP_004284564.1| hypothetical protein ACMV_23350 [Acidiphilium multivorum AIU301]
gi|325051344|dbj|BAJ81682.1| hypothetical protein ACMV_23350 [Acidiphilium multivorum AIU301]
Length = 456
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 37/131 (28%), Gaps = 4/131 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ + + ++ F + S ++ + ++S +G L + +
Sbjct: 320 QPEITKGEVAVLGTVNAPVIRINNTGLFASGSATVESTALPLISKIGQALAREKGKVQVI 379
Query: 87 GHADELGSRNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
G+ D L RA A SR+ G P
Sbjct: 380 GYTDSQPIHTLRFPNNLVLSEDRAKAAAAVLDRAIGDQSRITAEGRGAADPIATNATPQG 439
Query: 143 YAKNRRAIVFL 153
A NRR + L
Sbjct: 440 RALNRRIEIVL 450
>gi|296159938|ref|ZP_06842759.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
gi|295889921|gb|EFG69718.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
Length = 318
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++ F+T S ++ P +L + + ++ + I GH D G+R S+IAL RA
Sbjct: 211 NRTIEFETGSATLTPQGRAILDQMAAAMMKMTNKTVAIIGHTDNSGNRTSNIALSQARAD 270
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
AV Y VA+GI +M T G + P D A+NRR
Sbjct: 271 AVKGYLVAKGIPPQQMTTTGVGPDQPIASNDTTDGRARNRRIEF 314
>gi|157367360|gb|ABV45540.1| outer membrane protein 18 [Helicobacter pylori]
Length = 179
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/172 (20%), Positives = 73/172 (42%), Gaps = 24/172 (13%)
Query: 1 MQYSTIFIILSAITMMSISG-------------IDNLDTKISSPDTVLNESSLQEQFSSS 47
M+ S++F L A +++ + T + + + +++ +
Sbjct: 1 MKRSSVFSFLVAFLLVAGCSHKMDNKTVAGDVSAKTVQTAPVTTEPAPEKEEPKQEPAPV 60
Query: 48 VGDS-----------VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRN 96
V + ++FD Y I+ +D + L + +++ L+EG+ DE GS
Sbjct: 61 VEEKPAIESGTIIASIYFDFDKYEIKESDQETLDEIVQKAKENHMQVLLEGNTDEFGSSE 120
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
+ ALG++R +V N V +G+ +K S+G+ P + Y +NRR
Sbjct: 121 YNQALGVKRTLSVKNALVIKGVEKDMIKTISFGETKPKCAQKTRECYKENRR 172
>gi|114797292|ref|YP_760148.1| OmpA family membrane protein [Hyphomonas neptunium ATCC 15444]
gi|114737466|gb|ABI75591.1| membrane protein, OmpA family [Hyphomonas neptunium ATCC 15444]
Length = 544
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 55/127 (43%), Gaps = 3/127 (2%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH--DCDFLIEG 87
S + +++ + S+ ++ FD Y I+P L+ L + L+ + D +EG
Sbjct: 408 SGADIDAIAAVGAEIRLSLDSALLFDVGKYEIKPEAESALAELAAQLQTYGADIRVTVEG 467
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
H D GS S+ L RA +V++ + + + YG P E+ A+N
Sbjct: 468 HTDSTGSAASNQTLSENRARSVWDNLSGKISPVPEDVTIRGYGASRPVADNATEEGRAEN 527
Query: 147 RRAIVFL 153
RR + +
Sbjct: 528 RRVDILI 534
>gi|51596980|ref|YP_071171.1| OmpA/MotB family protein [Yersinia pseudotuberculosis IP 32953]
gi|170023725|ref|YP_001720230.1| type VI secretion system OmpA/MotB family protein [Yersinia
pseudotuberculosis YPIII]
gi|186896063|ref|YP_001873175.1| type VI secretion system OmpA/MotB family protein [Yersinia
pseudotuberculosis PB1/+]
gi|51590262|emb|CAH21899.1| possible OmpA/MotB family protein [Yersinia pseudotuberculosis IP
32953]
gi|169750259|gb|ACA67777.1| type VI secretion system OmpA/MotB family protein [Yersinia
pseudotuberculosis YPIII]
gi|186699089|gb|ACC89718.1| type VI secretion system OmpA/MotB family protein [Yersinia
pseudotuberculosis PB1/+]
Length = 458
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 43/123 (34%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
++ F S ++RP I V+ + + + LI GH D +
Sbjct: 334 VSVDETSNNSKVIFKGDSMFMVGSDNVRPEMIDVIKRVAQEVHRVKGAILIVGHTDSMPI 393
Query: 95 RNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
L +RA V Y GI +++ G+ P D ++NRR
Sbjct: 394 NKPGFPNNQVLSEKRAANVARYMEQAGIPTDKIRFEGKGETQPVSSNDDATGRSQNRRVE 453
Query: 151 VFL 153
+F+
Sbjct: 454 IFV 456
>gi|42522223|ref|NP_967603.1| peptidoglycan-associated lipoprotein [Bdellovibrio bacteriovorus
HD100]
gi|39574754|emb|CAE78596.1| peptidoglycan-associated lipoprotein [Bdellovibrio bacteriovorus
HD100]
Length = 168
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 16/161 (9%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---------------SV 52
+ L + + ++G T+ L S+ + +V
Sbjct: 5 LALGLVAIAFVAGCKGKQTQSDQSIETLPTGGQSTAIDSTPLNFDPMGSDSGKISGLVTV 64
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
F S+ + + ++ W++ + IEGH D G+ ++ALG RRA AV
Sbjct: 65 HFGYDKSSLDASSKKDIATNVEWMKANPSVRVQIEGHCDSRGTIEYNVALGERRANAVKA 124
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
Y V+ GI+A R+ SYGKE P G E A+AKNRRA
Sbjct: 125 YMVSLGIAADRLSTISYGKEKPLETGDTEAAWAKNRRANFV 165
>gi|153949967|ref|YP_001400351.1| OmpA domain-containing protein [Yersinia pseudotuberculosis IP
31758]
gi|152961462|gb|ABS48923.1| OmpA domain protein [Yersinia pseudotuberculosis IP 31758]
Length = 458
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 43/123 (34%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
++ F S ++RP I V+ + + + LI GH D +
Sbjct: 334 VSVDETSNNSKVIFKGDSMFMVGSDNVRPEMIDVIKRVAQEVHRVKGAILIVGHTDSMPI 393
Query: 95 RNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
L +RA V Y GI +++ G+ P D ++NRR
Sbjct: 394 NKPGFPNNQVLSEKRAANVARYMEQAGIPTDKIRFEGKGETQPVSSNDDATGRSQNRRVE 453
Query: 151 VFL 153
+F+
Sbjct: 454 IFV 456
>gi|302558689|ref|ZP_07311031.1| secreted protein [Streptomyces griseoflavus Tu4000]
gi|302476307|gb|EFL39400.1| secreted protein [Streptomyces griseoflavus Tu4000]
Length = 215
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 39/117 (33%), Gaps = 2/117 (1%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRN 96
+ ++ V F S + ++ + ++ + + G D LGS
Sbjct: 93 EDTNSDVTFALQAEVLFGKDSAKLGAEAKARIATIAGEIKTQNATKVRVFGFTDNLGSSA 152
Query: 97 SSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
L +RA AV + +V YG++ P E KNRR +
Sbjct: 153 HGDVLSRQRANAVQAVLGRELSDANITYEVRGYGEQYPIADNSTEAGRKKNRRVEIT 209
>gi|148261080|ref|YP_001235207.1| OmpA/MotB domain-containing protein [Acidiphilium cryptum JF-5]
gi|146402761|gb|ABQ31288.1| OmpA/MotB domain protein [Acidiphilium cryptum JF-5]
Length = 456
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 37/131 (28%), Gaps = 4/131 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ + + ++ F + S ++ + ++S +G L + +
Sbjct: 320 QPEITKGEVAVLGTVNAPVIRINNTGLFASGSATVESTALPLISKIGQALAREKGKVQVI 379
Query: 87 GHADELGSRNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
G+ D L RA A SR+ G P
Sbjct: 380 GYTDSQPIHTLRFPNNLVLSEDRAKAAAAVLDRAIGDQSRITAEGRGAADPIATNATPQG 439
Query: 143 YAKNRRAIVFL 153
A NRR + L
Sbjct: 440 RALNRRIEIVL 450
>gi|120554618|ref|YP_958969.1| OmpA/MotB domain-containing protein [Marinobacter aquaeolei VT8]
gi|120324467|gb|ABM18782.1| OmpA/MotB domain protein [Marinobacter aquaeolei VT8]
Length = 189
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 3/138 (2%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDS--VFFDTSSYSIRPADIQVLSNLGSWLE 77
G D S ++ ++ ++ D +FD + I+P VL +L
Sbjct: 52 GADGSGVSASELTDDERRAAQEQAEQEALRDITTFYFDFDTSEIKPDARDVLVAHARYLA 111
Query: 78 KHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ +EGHADE G++ ++ALG RRA AV + + G S +++ SYG+E P+V
Sbjct: 112 DNPRQQVRLEGHADERGTKEYNLALGERRANAVQRFLIVNGASRGQIETVSYGEEKPAVR 171
Query: 137 GHDEDAYAKNRRAIVFLK 154
G E A+A+NRR + +
Sbjct: 172 GSTESAWAQNRRVELVFQ 189
>gi|323703350|ref|ZP_08115000.1| OmpA/MotB domain protein [Desulfotomaculum nigrificans DSM 574]
gi|323531713|gb|EGB21602.1| OmpA/MotB domain protein [Desulfotomaculum nigrificans DSM 574]
Length = 263
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 50/128 (39%), Gaps = 5/128 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+ + + S D V F + P+ Q++ +G+ L + + +EGH D L
Sbjct: 114 VTVAIEERGVVVSFQDVVLFPLGVADLNPSSTQIVDKIGAILHQTNNYIRVEGHTDNLPI 173
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
S+ L L RA +V + + R+ T YG+ P + +NRR
Sbjct: 174 RTSKFPSNWELSLARAASVVHRLIEYSGIPAERLSATGYGEYRPRRPNDSDANRQQNRRV 233
Query: 150 IVFLKGCR 157
+ + +
Sbjct: 234 DIVVLRTK 241
>gi|296113686|ref|YP_003627624.1| OmpA family protein [Moraxella catarrhalis RH4]
gi|295921380|gb|ADG61731.1| OmpA family protein [Moraxella catarrhalis RH4]
Length = 551
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 51/140 (36%), Gaps = 1/140 (0%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
I+ I + + E+ + ++ + F S I + ++L
Sbjct: 389 TAVADSIETARVAIVALGDTVEENEMDILINALNTQIINFALDSTEIPQENKEILDLAAE 448
Query: 75 WLEK-HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
L+ + I GH D G+ + L RA AV Y V++G++A R+ + P
Sbjct: 449 KLKAVPETTLRIIGHTDTQGTHEYNQDLSESRAAAVKEYLVSKGVAAERLNTQGASFDYP 508
Query: 134 SVYGHDEDAYAKNRRAIVFL 153
E +NRR L
Sbjct: 509 VASNATEQGRFQNRRIEFVL 528
>gi|294501552|ref|YP_003565252.1| putative flagellar motor channel protein [Bacillus megaterium QM
B1551]
gi|294351489|gb|ADE71818.1| putative flagellar motor channel protein [Bacillus megaterium QM
B1551]
Length = 203
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 41/132 (31%), Gaps = 5/132 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
V+ + + + V F+T I L LG D +EGH D
Sbjct: 71 QNVITAKRDERGVVLILQEQVLFETGQADILKKGTPFLDELGRLFSTIPNDIKVEGHTDN 130
Query: 92 LGSRNS----SIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ L RA V Y SA+R + YG P V KN
Sbjct: 131 RPIHTYRYPSNWELSAARASGVIRYLTNHFSLSANRFEALGYGDTKPLVPNTSNGNLQKN 190
Query: 147 RRAIVFLKGCRA 158
RR + + A
Sbjct: 191 RRVEIIISDPEA 202
>gi|124006808|ref|ZP_01691638.1| OmpA domain protein [Microscilla marina ATCC 23134]
gi|123987489|gb|EAY27198.1| OmpA domain protein [Microscilla marina ATCC 23134]
Length = 570
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
S+ F + +I I L L + F IEGH+D +G+ +++ L +RA
Sbjct: 463 AHSLHFASGKTTINDESIPDLKAILAIMKKYPKNKFNIEGHSDNVGNAANNLRLSQQRAN 522
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+V YFV GI+ASR+ YG+ P V KNRR V +
Sbjct: 523 SVRQYFVNNGIAASRLIAKGYGQTRPEVSNATAAGRKKNRRIEVLV 568
>gi|253698930|ref|YP_003020119.1| OmpA/MotB domain protein [Geobacter sp. M21]
gi|251773780|gb|ACT16361.1| OmpA/MotB domain protein [Geobacter sp. M21]
Length = 204
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 5/139 (3%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS-NLGS 74
+S + I + SP + Q ++ ++++FD S + A L NL
Sbjct: 68 LSAANISSDSIPPQSPQATAGTDASQ----TAALETIYFDFDSSLLNDAARATLVANLEK 123
Query: 75 WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
IEGH+DE GS + ++AL RRA + Y A G A ++ V YG+E P+
Sbjct: 124 LKANPKASLRIEGHSDERGSDDYNLALSERRAQSAKKYLQALGFPAEKLSVLGYGEERPA 183
Query: 135 VYGHDEDAYAKNRRAIVFL 153
V G E+ +AKNRR +
Sbjct: 184 VKGESEEFWAKNRRDEFVI 202
>gi|227538856|ref|ZP_03968905.1| OmpA/MotB domain protein [Sphingobacterium spiritivorum ATCC 33300]
gi|227241365|gb|EEI91380.1| OmpA/MotB domain protein [Sphingobacterium spiritivorum ATCC 33300]
Length = 230
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 53/133 (39%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHD 80
D +I + E + + FD + ++ + +S + + ++ D
Sbjct: 83 DKQAAEIENTVAGAEVIKSDEGIIVKFDEGILFDFNKSDLKASAKTNISKLVATLNKEPD 142
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
L+ GH D +GS ++ + RA AV Y V++G++ R+ P +
Sbjct: 143 TKILVIGHTDNVGSLAANQKVSEARAAAVKTYAVSQGLNGGRINTEGKNYSEPLASNDTD 202
Query: 141 DAYAKNRRAIVFL 153
A+NRR + +
Sbjct: 203 AGRAENRRVEIVI 215
>gi|254459056|ref|ZP_05072479.1| OmpA domain protein [Campylobacterales bacterium GD 1]
gi|207084327|gb|EDZ61616.1| OmpA domain protein [Campylobacterales bacterium GD 1]
Length = 254
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 1/104 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAV 109
V F S Y++ + L N +L+++ LI G+ D +GS ++ L RA AV
Sbjct: 149 KVNFAPSKYNVSEELVNDLQNFALFLKENPGYQILIYGYTDSIGSAAANKTLSQNRANAV 208
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
GI +RM G+ P + A+NRR V L
Sbjct: 209 KEALSRYGIKTTRMTAIGKGEANPIADNTTKTGRAENRRIEVEL 252
>gi|189500639|ref|YP_001960109.1| peptidoglycan-associated lipoprotein [Chlorobium phaeobacteroides
BS1]
gi|189496080|gb|ACE04628.1| peptidoglycan-associated lipoprotein [Chlorobium phaeobacteroides
BS1]
Length = 158
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 10/158 (6%)
Query: 7 FIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQF---------SSSVGDSVFFDTS 57
++ I ++SG + ++ + +E + + VFF
Sbjct: 1 MLLCWVIVAFAVSGCGSKSSETALDTNSGSEQYDSSGSDSASALLEEARRMVKDVFFQYD 60
Query: 58 SYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
S + P + L N W + +IEGH DE G+ ++ALG +RA ++ V
Sbjct: 61 SAELEPVAVSQLKNNAEWLNQNRTISAMIEGHCDERGTSEYNMALGEKRAETTKSFLVRA 120
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G++ASR++ S+G+E P GH E A++KNRRA +K
Sbjct: 121 GVAASRLETVSFGEERPFDSGHTEAAWSKNRRAHFVVK 158
>gi|189218838|ref|YP_001939479.1| Outer membrane protein or related peptidoglycan-associated
(lipo)protein [Methylacidiphilum infernorum V4]
gi|189185696|gb|ACD82881.1| Outer membrane protein or related peptidoglycan-associated
(lipo)protein [Methylacidiphilum infernorum V4]
Length = 342
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 51/133 (38%), Gaps = 3/133 (2%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDF 83
D + + + + + + FD S +I+P +L + + + D
Sbjct: 205 DIQTQFKAAANFDPRVPQPVVLRLPSDILFDFDSATIKPNAEPLLFQVLEILKKYNRADV 264
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSV-YGHDED 141
I GH D G ++ L +RA+AV + A T YGK P V +
Sbjct: 265 EIGGHTDTFGDEMYNLQLSEQRAFAVQQWLEAHLPQGMYNFHATGYGKSHPIVNPRGSIE 324
Query: 142 AYAKNRRAIVFLK 154
A+NRR + ++
Sbjct: 325 EQARNRRVEIVIR 337
>gi|3493603|gb|AAC33455.1| outer membrane protein homolog [Vitreoscilla sp. C1]
Length = 217
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHA 89
+T + + + ++ + +S+ F T SY + + L+++ S + D I GH
Sbjct: 89 ANTQVEVNRVGDEIRLVMPESITFATGSYQLNSSASTSLNSVSSVLAQYTDTTINIVGHT 148
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GS + L RA AV NY V+R ++++R+ G P + A+NRR
Sbjct: 149 DSTGSDAINEPLSRNRASAVANYLVSRNVASNRITTVGAGCRQPVASNNTVAGRAENRRV 208
Query: 150 IVFL 153
+ +
Sbjct: 209 EITV 212
>gi|326563483|gb|EGE13746.1| OmpA family protein [Moraxella catarrhalis 103P14B1]
gi|326572976|gb|EGE22955.1| OmpA family protein [Moraxella catarrhalis CO72]
gi|326573791|gb|EGE23748.1| OmpA family protein [Moraxella catarrhalis 101P30B1]
Length = 551
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 51/140 (36%), Gaps = 1/140 (0%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
I+ I + + E+ + ++ + F S I + ++L
Sbjct: 389 TAVADSIETARVAIVALGDTVEENEMDILINALNTQIINFALDSTEIPQENKEILDLAAE 448
Query: 75 WLEK-HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
L+ + I GH D G+ + L RA AV Y V++G++A R+ + P
Sbjct: 449 KLKAVPETTLRIIGHTDTQGTHEYNQDLSESRAAAVKEYLVSKGVAAERLNTQGASFDYP 508
Query: 134 SVYGHDEDAYAKNRRAIVFL 153
E +NRR L
Sbjct: 509 VASNATEQGRFQNRRIEFVL 528
>gi|163783062|ref|ZP_02178057.1| hypothetical protein HG1285_00765 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881742|gb|EDP75251.1| hypothetical protein HG1285_00765 [Hydrogenivirga sp. 128-5-R1-1]
Length = 351
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRA 106
+ + FD YSIR + +L+ + L+++ IEG D +G + + L ++RA
Sbjct: 239 ITARIHFDFDKYSIRREYVPILNEVVKTLKENEFVKVRIEGFTDIIGPKEYNEKLAMKRA 298
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV Y V +GI ++ + +GKE D+ NRR +
Sbjct: 299 EAVKRYLVEKGIPEDKIDIVGFGKERFIASNEDKIGRLTNRRVEFIV 345
>gi|54297693|ref|YP_124062.1| flagellar motor protein MotD [Legionella pneumophila str. Paris]
gi|53751478|emb|CAH12896.1| hypothetical protein lpp1744 [Legionella pneumophila str. Paris]
Length = 273
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 60/143 (41%), Gaps = 5/143 (3%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQF-SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
G+D L+ +S + + + QE + + FD+ S I+P + L L ++
Sbjct: 94 GLDELNKSLSELEDGDFKLNRQEGWVEIDIKAGSLFDSGSADIKPEALIKLMKLAEKIKN 153
Query: 79 HDCDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
++EG+ D + S+ L RA V GI+ R+ VT YG + P
Sbjct: 154 LPFTVVVEGYTDNVPIETPQYPSNWELSAARAATVGRILNGFGIANHRILVTGYGDQYPI 213
Query: 135 VYGHDEDAYAKNRRAIVFLKGCR 157
+ E ++NRR + + R
Sbjct: 214 TDNYTEAGRSQNRRVNILITKNR 236
>gi|88800186|ref|ZP_01115754.1| peptidoglycan-associated lipoprotein [Reinekea sp. MED297]
gi|88777032|gb|EAR08239.1| peptidoglycan-associated lipoprotein [Reinekea sp. MED297]
Length = 188
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 48/184 (26%), Positives = 79/184 (42%), Gaps = 31/184 (16%)
Query: 2 QYSTIFIILSAITMMSISG--IDNLDTKISSPDTVLNESSL------QEQFSSSVGDS-- 51
+ T ++ SA+ +++ G D ++ + + E E V D
Sbjct: 5 KLLTAAVMSSALVLVACGGNTDDTDQGSTTTTEPAVEEVDTLELETDDESIELVVEDVEP 64
Query: 52 --------------------VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
V+FD IRP I +L+ + + ++EGHAD
Sbjct: 65 VAVIEDAAEDVYNELLDLTLVYFDFDKSVIRPEFIDMLNAHSEFLVANPTQMVVLEGHAD 124
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
E G+R ++ALG RRA V Y + +G+SA+++ SYG+E P G E Y++NRR
Sbjct: 125 ERGTREYNLALGERRAKQVATYLMVQGVSAAQIDTVSYGEEKPLAIGKTEAEYSQNRRVE 184
Query: 151 VFLK 154
+ K
Sbjct: 185 IVYK 188
>gi|326562428|gb|EGE12747.1| OmpA family protein [Moraxella catarrhalis 7169]
gi|326562797|gb|EGE13092.1| OmpA family protein [Moraxella catarrhalis 46P47B1]
gi|326569136|gb|EGE19198.1| OmpA family protein [Moraxella catarrhalis BC1]
gi|326570622|gb|EGE20658.1| OmpA family protein [Moraxella catarrhalis BC7]
gi|326574786|gb|EGE24720.1| OmpA family protein [Moraxella catarrhalis O35E]
Length = 551
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 51/140 (36%), Gaps = 1/140 (0%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
I+ I + + E+ + ++ + F S I + ++L
Sbjct: 389 TAVADSIETARVAIVALGDTVEENEMDILINALNTQIINFALDSTEIPQENKEILDLAAE 448
Query: 75 WLEK-HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
L+ + I GH D G+ + L RA AV Y V++G++A R+ + P
Sbjct: 449 KLKAVPETTLRIIGHTDTQGTHEYNQDLSESRAAAVKEYLVSKGVAAERLNTQGASFDYP 508
Query: 134 SVYGHDEDAYAKNRRAIVFL 153
E +NRR L
Sbjct: 509 VASNATEQGRFQNRRIEFVL 528
>gi|261821727|ref|YP_003259833.1| hypothetical protein Pecwa_2465 [Pectobacterium wasabiae WPP163]
gi|261605740|gb|ACX88226.1| type IV / VI secretion system protein, DotU family [Pectobacterium
wasabiae WPP163]
Length = 413
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 49/131 (37%), Gaps = 4/131 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
K ++ +Q ++ F ++S +R V+ + + L+
Sbjct: 265 KPEIDAGLVAVRDEADQSVVTLKGDGLFASASTDVRGRYDVVIKRVAEAMNNVRGKVLVI 324
Query: 87 GHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
G++D + S+ L L RA +V + SR+ G+ P V + +
Sbjct: 325 GYSDNVPIRSARFASNYELSLARAQSVQTLLQQQLTQPSRVTAAGRGENHPLVPNTNAEN 384
Query: 143 YAKNRRAIVFL 153
A+NRR + L
Sbjct: 385 RARNRRVEITL 395
>gi|126649533|ref|ZP_01721774.1| flagellar motor protein MotB [Bacillus sp. B14905]
gi|126593858|gb|EAZ87781.1| flagellar motor protein MotB [Bacillus sp. B14905]
Length = 254
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 50/134 (37%), Gaps = 6/134 (4%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLI 85
++ + E ++ DS+ FD +I+P I + L + + +I
Sbjct: 107 AVNEMEGQFATEMTDEGLLVTIRDSILFDPGQATIKPEYIPIAKELAGVLVSNPPRNIVI 166
Query: 86 EGHADELG---SRNSSIALGLRRAYAVFNYF--VARGISASRMKVTSYGKEMPSVYGHDE 140
GH D + + +S++ L L RA + + + YG+
Sbjct: 167 TGHTDNVPAGPNFSSNLELSLMRASNFYMVLLDSNSQLKSENFSAKGYGENRAIAPNDTA 226
Query: 141 DAYAKNRRAIVFLK 154
+ AKNRR V ++
Sbjct: 227 EGRAKNRRVEVLIQ 240
>gi|15895120|ref|NP_348469.1| flagellar motor protein MotB [Clostridium acetobutylicum ATCC 824]
gi|15024821|gb|AAK79809.1|AE007693_7 Flagellar motor protein MotB [Clostridium acetobutylicum ATCC 824]
gi|325509259|gb|ADZ20895.1| Flagellar motor protein MotB [Clostridium acetobutylicum EA 2018]
Length = 254
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 52/135 (38%), Gaps = 5/135 (3%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF 83
+ + +E + S+ D + F + ++ +L + + D +
Sbjct: 108 QKVAENGYTDKIKSKITEEGLAISIQDIILFRSGDSTVLANIQPMLIEISKMIHSLDNNI 167
Query: 84 LIEGHADELG----SRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGH 138
+ GH D + + +S+ L RA V + + G+ R + +YG+ P
Sbjct: 168 KVTGHTDNIPIATETFHSNWELSASRALNVMKFMVTSGGVDEKRFSIQAYGEYSPEETNS 227
Query: 139 DEDAYAKNRRAIVFL 153
E A+NRR +F+
Sbjct: 228 TEQGRARNRRVEIFI 242
>gi|168182734|ref|ZP_02617398.1| chemotaxis motB protein [Clostridium botulinum Bf]
gi|182674075|gb|EDT86036.1| chemotaxis motB protein [Clostridium botulinum Bf]
Length = 247
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 49/126 (38%), Gaps = 5/126 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ + + D+V F+ I+P Q++ + + + +IEGH D +
Sbjct: 112 SSVEVKEDGRGIIIQLRDNVLFEIGRADIKPQSKQIMDKINGLIATLPNEVIIEGHTDNV 171
Query: 93 GS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
S+ L RA V YFV + + R YG+ P + + +KNR
Sbjct: 172 PIKNEVYGSNWELSTARAVNVLRYFVETKKQNPVRFTAAGYGEYRPIAQNNSDANRSKNR 231
Query: 148 RAIVFL 153
R + +
Sbjct: 232 RVNIVI 237
>gi|218929795|ref|YP_002347670.1| putative OmpA family protein [Yersinia pestis CO92]
gi|115348406|emb|CAL21342.1| putative OmpA family protein [Yersinia pestis CO92]
Length = 261
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 43/123 (34%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
++ F S ++RP I V+ + + + LI GH D +
Sbjct: 137 VSVDETSNNSKVIFKGDSMFMVGSDNVRPEMIDVIKRVAQEVHRVKGAILIVGHTDSMPI 196
Query: 95 RNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
L +RA V Y GI +++ G+ P D ++NRR
Sbjct: 197 NKPGFPNNQVLSEKRAANVARYMEQAGIPTDKIRFEGKGETQPVSSNDDATGRSQNRRVE 256
Query: 151 VFL 153
+F+
Sbjct: 257 IFV 259
>gi|86130189|ref|ZP_01048789.1| OmpA family protein [Dokdonia donghaensis MED134]
gi|85818864|gb|EAQ40023.1| OmpA family protein [Dokdonia donghaensis MED134]
Length = 236
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 3/135 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDS--VFFDTSSYSIRPADIQVLSNLGSWLEKH 79
D +I + + + + ++ V+FDT+ Y+I +L+ L + ++++
Sbjct: 84 DKQAQQIEQEIPGASVERVDDGIVVTFDENSGVYFDTAKYNINANSQTMLNKLSNIMKEY 143
Query: 80 -DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ ++ GH D +GS S++ L RA AV NY + G+SA R YG+ P+
Sbjct: 144 NQTNVIVAGHTDSVGSDASNLTLSQNRANAVTNYMIGTGLSAGRFTTVWYGEAQPAASND 203
Query: 139 DEDAYAKNRRAIVFL 153
+ A+NRR + +
Sbjct: 204 TAEGRAQNRRVQLAI 218
>gi|320095241|ref|ZP_08026939.1| outer membrane protein OprF [Actinomyces sp. oral taxon 178 str.
F0338]
gi|319977825|gb|EFW09470.1| outer membrane protein OprF [Actinomyces sp. oral taxon 178 str.
F0338]
Length = 174
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 51/126 (40%), Gaps = 2/126 (1%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLI 85
+++ D ++ + Q +++ V F+ S + +VL +L S + +
Sbjct: 46 SVATVDGAVSMAEQQNATVTTLSGDVNFEVDSDQLTARAKEVLDSLASEWSKAKPSTVTV 105
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
GH D + ++ L RRA AV +Y + + G+ P E+ A+
Sbjct: 106 TGHTDSVADDAHNLDLSKRRAKAVGDYLAGKVP-GLSLTTDGKGEAEPIGDNETEEGRAQ 164
Query: 146 NRRAIV 151
NRR +
Sbjct: 165 NRRVEI 170
>gi|256421238|ref|YP_003121891.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
gi|256036146|gb|ACU59690.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
Length = 594
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 48/113 (42%), Gaps = 7/113 (6%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
V ++V++D + ++PA L + + + H D GS + + L RA
Sbjct: 478 VLENVYYDFNESYLQPASFPSLDRLVAMLKKYPKIVIELSAHTDSKGSNDLNEKLSDARA 537
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYG------HDEDAYAKNRRAIVFL 153
+ +Y V++GI ++R++ Y P + + A+NRR +
Sbjct: 538 KSCVDYLVSQGIESTRLQAKGYAASHPVAPNTNKDGSDNPEGRARNRRTEFKI 590
>gi|146282858|ref|YP_001173011.1| flagellar motor protein MotB [Pseudomonas stutzeri A1501]
gi|145571063|gb|ABP80169.1| flagellar motor protein MotB [Pseudomonas stutzeri A1501]
Length = 244
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 51/148 (34%), Gaps = 13/148 (8%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGD---------SVFFDTSSYSIRPADIQVLS 70
D +L + V + + F + + A ++V+
Sbjct: 91 AADAQPDDPQESMPTPPGMALGDDIQVIVNEGSISFRISSEILFGSGRAELEDAGLEVID 150
Query: 71 NLGSWLEKHDCDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVT 126
L L + ++EGH D L S+ L RA +V Y GI A+R+ T
Sbjct: 151 RLVPTLAANAFRIVVEGHTDNLPIQTERFPSNWELSASRASSVVRYLQLAGIEATRLSAT 210
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
Y P DE A NRR + ++
Sbjct: 211 GYADTRPLADNADERGRASNRRVELVMQ 238
>gi|172065209|ref|YP_001815921.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6]
gi|171997451|gb|ACB68368.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6]
Length = 220
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLR 104
S+ +F T S + A L L + ++H ++G+ D GS + AL R
Sbjct: 110 VSLTGDAYFATDSAVLTSAATAALDKLLNQQGDRHFARVEVDGYTDATGSDAHNQALSKR 169
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RA AV Y G+ A T +G+ P+ + A+NRR + L+
Sbjct: 170 RADAVAAYLRGHGLKADAFAATGHGEANPAASNDTVEGRARNRRVEISLQ 219
>gi|226328442|ref|ZP_03803960.1| hypothetical protein PROPEN_02336 [Proteus penneri ATCC 35198]
gi|225203175|gb|EEG85529.1| hypothetical protein PROPEN_02336 [Proteus penneri ATCC 35198]
Length = 340
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 2/111 (1%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGL 103
++ F + Y ++ +VL + L + K +I G+ D G+ + + L L
Sbjct: 208 MVTLDSLALFASGQYKLKNEATKVLVDALINIKAKPGWLIVISGYTDNTGNPDLNQKLSL 267
Query: 104 RRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+RA AV ++ + I+ S V YG+ P D A+NRR + L
Sbjct: 268 KRAEAVRDWMIKTSDIAPSCFAVQGYGQHQPVADNSTLDGRARNRRVEIRL 318
>gi|256823064|ref|YP_003147027.1| peptidoglycan-associated lipoprotein [Kangiella koreensis DSM
16069]
gi|256796603|gb|ACV27259.1| peptidoglycan-associated lipoprotein [Kangiella koreensis DSM
16069]
Length = 172
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 63/119 (52%)
Query: 34 VLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG 93
E+ Q + + ++FD SIR ++VL +++ ++EGHADE G
Sbjct: 52 AAEEAERQRIAALLDNNVIYFDFDDDSIRSEYVEVLEAHAMYIQSSGKSVVLEGHADERG 111
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ ++ALG RRA +V G+S S ++V S+G+E P+ H+E A+ +NRR +
Sbjct: 112 TPEYNLALGERRAKSVAQLMRTYGVSDSNIEVISFGEESPANPAHNESAWQENRRVEIK 170
>gi|198282220|ref|YP_002218541.1| peptidoglycan-associated lipoprotein [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|218667535|ref|YP_002424585.1| peptidoglycan-associated lipoprotein, putative [Acidithiobacillus
ferrooxidans ATCC 23270]
gi|198246741|gb|ACH82334.1| peptidoglycan-associated lipoprotein [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|218519748|gb|ACK80334.1| peptidoglycan-associated lipoprotein, putative [Acidithiobacillus
ferrooxidans ATCC 23270]
Length = 192
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/147 (23%), Positives = 64/147 (43%), Gaps = 2/147 (1%)
Query: 11 SAITMMSISGIDNLDTKISSP-DTVLNESSLQEQFSSSVGDSVFFDTSS-YSIRPADIQV 68
+A ++ GI+ + + P + S E + V F +S A
Sbjct: 42 AATAGLAGEGINGQNLNANGPIGGGSSGLSAAELAALPQNLRVHFAFNSGAMDAQAQQIA 101
Query: 69 LSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
N + +EG+ D+ G++ ++ALG +RA V + ++G+SA+R+ S+
Sbjct: 102 AQNAQFMVAHPHVQVRLEGNTDDRGTQEYNLALGEQRAETVKQFLQSQGVSAARISTVSF 161
Query: 129 GKEMPSVYGHDEDAYAKNRRAIVFLKG 155
GK+ P +D +A+NRR G
Sbjct: 162 GKDNPLCTTNDSACWARNRRVDFVYSG 188
>gi|187251173|ref|YP_001875655.1| peptidoglycan-associated (lipo)protein [Elusimicrobium minutum
Pei191]
gi|186971333|gb|ACC98318.1| peptidoglycan-associated (lipo)protein-like outer membrane protein
[Elusimicrobium minutum Pei191]
Length = 189
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 51/128 (39%), Gaps = 1/128 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGH 88
+ + + + F+T+S ++ L + L+ + + ++G+
Sbjct: 62 EVSGYASVRQAGTKQVVTFTTPILFETNSDKLKTESYDPLKKVAVVLKARPNMQTEVKGY 121
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D LG ++ L +RA +V N V G++ + + YG P ++ AKNRR
Sbjct: 122 TDSLGDPAYNVVLSEKRANSVRNVLVENGVNEANVTAKGYGAADPIADNKTKEGRAKNRR 181
Query: 149 AIVFLKGC 156
+ +
Sbjct: 182 VELDITNK 189
>gi|15615801|ref|NP_244105.1| flagellar motor protein MotS [Bacillus halodurans C-125]
gi|10175862|dbj|BAB06958.1| BH3239 [Bacillus halodurans C-125]
Length = 250
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 47/131 (35%), Gaps = 5/131 (3%)
Query: 34 VLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG 93
++ + + + F+T + P L +G+ +E +EGH D
Sbjct: 115 QISATRDDRGVVLILQEQALFETGEAEVLPGARPFLDKVGTLVELIPNIVKVEGHTDNRP 174
Query: 94 S----RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
S+ L RA +V Y + SR T +G P V E+ +NRR
Sbjct: 175 ISTYRYPSNWELSGARASSVIRYIIDHHNVDPSRFIATGFGDTRPVVPNTTEENLQQNRR 234
Query: 149 AIVFLKGCRAN 159
I+ + N
Sbjct: 235 VIIVISDPTTN 245
>gi|188992991|ref|YP_001905001.1| OmpA family outer membrane lipoprotein [Xanthomonas campestris pv.
campestris str. B100]
gi|167734751|emb|CAP52961.1| OmpA family outer membrane lipoprotein [Xanthomonas campestris pv.
campestris]
Length = 431
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 46/123 (37%), Gaps = 7/123 (5%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRN 96
+ ++ D + FD +IRP +VL L + + + GH D G +
Sbjct: 309 PGAPCGYVITLSDRILFDFDKAAIRPDAARVLDTLAAALGKVSVAQMEVRGHTDAKGGDD 368
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG-----HDEDAYAKNRRAIV 151
+ AL RRA AV RG A YG+ P + NRR +
Sbjct: 369 YNQALSERRANAVLAALRTRGT-AQSASAKGYGESQPLAPNTVKGQDNPGGRQLNRRVEL 427
Query: 152 FLK 154
FL+
Sbjct: 428 FLR 430
>gi|308047841|ref|YP_003911407.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
gi|307630031|gb|ADN74333.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
Length = 716
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 51/137 (37%), Gaps = 4/137 (2%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH- 79
+ + + +L + +V FDT S ++ AD Q L+ L + L
Sbjct: 20 VAGAQAAPLAGQWQADTDALISGQRQQITLNVHFDTDSATLSQADQQALTQLAAKLAPML 79
Query: 80 --DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVY 136
I GH D G+ ++ L RRA +V + + R++ +G+ P
Sbjct: 80 DGQMALAISGHTDSAGAEEYNLGLSQRRAQSVAQFLTSLMPEQHIRIESRYFGETQPLQS 139
Query: 137 GHDEDAYAKNRRAIVFL 153
A NRR + L
Sbjct: 140 NDSARGMAANRRVEITL 156
>gi|262371750|ref|ZP_06065029.1| outer membrane protein A [Acinetobacter junii SH205]
gi|262311775|gb|EEY92860.1| outer membrane protein A [Acinetobacter junii SH205]
Length = 346
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 56/141 (39%), Gaps = 5/141 (3%)
Query: 20 GIDNLDTKISSPDTVLNESS-LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LE 77
++ P V + L E + + VFFDT+ I+P ++ + E
Sbjct: 197 AAPVVEVAPVEPTPVAPQPQELTEDLNMEL--RVFFDTNKSDIKPQYKSEIAKVAEKLAE 254
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVY 136
+ IEGH D G R + L L RA +V + V + ASR+ + + P
Sbjct: 255 YPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIAD 314
Query: 137 GHDEDAYAKNRRAIVFLKGCR 157
++ A NRR + G R
Sbjct: 315 NKTKEGRAMNRRVFAAITGSR 335
>gi|256422968|ref|YP_003123621.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
gi|256037876|gb|ACU61420.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
Length = 499
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 37/104 (35%), Gaps = 1/104 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
+ F +S + L +L + GH D G+ + +L ++RA AV
Sbjct: 391 DILFKFNSSELNKNLYSSLDSLIKRIPRDGSIQLQVNGHTDNAGTSAYNNSLSMKRANAV 450
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
Y G+ +T G+ P +NRR + +
Sbjct: 451 AGYMQEHGLGNDIRLITGVGESQPVADNQSAAGRRRNRRVEIII 494
Score = 42.1 bits (97), Expect = 0.024, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 35/102 (34%), Gaps = 2/102 (1%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F S+ Q + + + + + G+A + S + + +A AV NY
Sbjct: 265 LFTVDKNSLNDRYKQQIDEALNRYKGNRARIQLIGYAWQKASEEYNRIISADKAKAVANY 324
Query: 113 FVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V + +V GK P A +N R + +
Sbjct: 325 LVYNEGYSFDDFEVQGAGKTKPRYDTAGNTA-GENNRVEMII 365
>gi|209965863|ref|YP_002298778.1| outer membrane protein OmpA (probable proton motor MotY)
[Rhodospirillum centenum SW]
gi|209959329|gb|ACI99965.1| outer membrane protein OmpA (probable proton motor MotY)
[Rhodospirillum centenum SW]
Length = 281
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 59/140 (42%), Gaps = 1/140 (0%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+++ D + ++ E + ++ FD S ++ P D Q L L +L
Sbjct: 132 TVAEEDRQRIQQLESQLQQYQARETEAGTVLTLSNINFDLDSATLSPGDRQRLRPLVEYL 191
Query: 77 EKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
LIEGH D G + L RRA AV ++ V +GI A+R+ G+ +P
Sbjct: 192 RSQPDRAVLIEGHTDSQGPAAYNEELSQRRAEAVRDFLVDQGIQAARITTRGLGEGVPVA 251
Query: 136 YGHDEDAYAKNRRAIVFLKG 155
+ +NRR V ++
Sbjct: 252 SNETQAGRLQNRRIEVTVEN 271
>gi|107025698|ref|YP_623209.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
gi|116693120|ref|YP_838653.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
HI2424]
gi|105895072|gb|ABF78236.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
gi|116651120|gb|ABK11760.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424]
Length = 170
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 53/152 (34%), Gaps = 6/152 (3%)
Query: 9 ILSAITMMSISGID-----NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRP 63
L ++ L + + F + FD Y+++P
Sbjct: 17 ALLLCMLLVGCQTPPPLHRGLTQTQVTALKSAGFQETGQGFEFGSTGPILFDFDRYNLKP 76
Query: 64 ADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASR 122
+++ +G L + + G++D+ G+ L RRA V V G+ A R
Sbjct: 77 DVRRIVERIGRTLRSAGINGVRVYGYSDDEGTAAYDAELSRRRAEVVAVELVDVGLDAKR 136
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ + GK P A+NRRA + +
Sbjct: 137 IAIVGKGKLDPVGDNRTPAGRAQNRRAAIVVS 168
>gi|300313671|ref|YP_003777763.1| OmpA family protein [Herbaspirillum seropedicae SmR1]
gi|300076456|gb|ADJ65855.1| OmpA family protein [Herbaspirillum seropedicae SmR1]
Length = 241
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 53/135 (39%), Gaps = 1/135 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
+ + V + + + + FDT I+P VL + +E
Sbjct: 78 NQKRAMEEATQGTGVQVSQTADNRLKLEIPSDISFDTGRADIKPEMRPVLDRFAATLVEN 137
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
I GH D GS + L L+RA +Y +RG++A+R + G P V
Sbjct: 138 PATTVTIVGHTDNTGSDAINDPLSLQRASRTRDYLSSRGVAANRFSIQGRGSHEPLVANT 197
Query: 139 DEDAYAKNRRAIVFL 153
+ A+NRR +F+
Sbjct: 198 SDANRARNRRVEIFV 212
>gi|292490116|ref|YP_003533011.1| putative outer membrane lipoprotein yiaD [Erwinia amylovora
CFBP1430]
gi|292901121|ref|YP_003540490.1| outer membrane protein [Erwinia amylovora ATCC 49946]
gi|291200969|emb|CBJ48108.1| putative outer membrane protein [Erwinia amylovora ATCC 49946]
gi|291555558|emb|CBA24133.1| putative outer membrane lipoprotein yiaD precursor [Erwinia
amylovora CFBP1430]
Length = 221
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 64/124 (51%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD+SS +++PA L+ + L+++ + G+ D
Sbjct: 95 GTGVSVTRSGDNIVLNMPNNVTFDSSSSTLKPAGANTLTGVAMVLKEYPKTAVNVVGYTD 154
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GSR ++ L +RA V + +A+G++A+R++ G + P + A+NRR
Sbjct: 155 SSGSRQLNMNLSQQRADGVGSALIAQGVAANRVRTNGMGPDNPVASNSSAEGKAQNRRVE 214
Query: 151 VFLK 154
+ L
Sbjct: 215 ITLS 218
>gi|30314430|gb|AAP15424.1| outer membrane lipoprotein precursor [Burkholderia cepacia]
Length = 150
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ +N L + S S++FD SYS++ ++ +L+ H
Sbjct: 16 AVSTQPSADNVAQVNVDPLNDPNSPLAKRSIYFDFDSYSVKDDYQSLMQQHAQYLKSHPQ 75
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
LI+G+ DE G+ ++ALG +RA AV G++ S+M+ S GKE P GHDE
Sbjct: 76 RHVLIQGNTDERGTSEYNLALGQKRAEAVRRAMALLGVNDSQMEAVSLGKEKPQATGHDE 135
Query: 141 DAYAKNRRAIVF 152
++A+NRRA +
Sbjct: 136 ASWAQNRRADLV 147
>gi|254467376|ref|ZP_05080787.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
gi|206688284|gb|EDZ48766.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
Length = 634
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 44/133 (33%), Gaps = 2/133 (1%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGD-SVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
+ D L + Q +S+ D + F+ S +I + +
Sbjct: 467 TYEKPPEPKDKPLPPELCEAQLASAQSDGKITFEPGSATIAADSAGTMDRIAEILGRCGP 526
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
I+GH D G + L RA +V N AR + S YG+ P E
Sbjct: 527 VRLEIQGHTDSQGREAMNQNLSQARAQSVLNELRARRVVTSTFAAKGYGESTPIAGNDTE 586
Query: 141 DAYAKNRRAIVFL 153
+ NRR L
Sbjct: 587 EGREANRRIEFKL 599
>gi|170696413|ref|ZP_02887541.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
gi|170138674|gb|EDT06874.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
Length = 322
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++ F+T S ++ P +L + + + + I GH D G+R S+IAL RA
Sbjct: 215 NRTIEFETGSATLTPQGRAILDQMAAAMLKMATKTVAIIGHTDNSGNRTSNIALSQARAD 274
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
AV Y VA+GI +M T G + P D A+NRR
Sbjct: 275 AVKGYLVAKGIPPQQMSTTGVGPDQPIASNDTADGRARNRRIEF 318
>gi|23099999|ref|NP_693465.1| motility protein B [Oceanobacillus iheyensis HTE831]
gi|22778230|dbj|BAC14500.1| motility protein B (flagellar motor rotation) [Oceanobacillus
iheyensis HTE831]
Length = 257
Score = 75.6 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 44/120 (36%), Gaps = 6/120 (5%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSS 98
E ++ + VFFD+ S ++ ++ +++ + + +I GHAD++
Sbjct: 128 TDEGLMITLVNEVFFDSGSAEVKETSKEIANDVSNLLYTEPPHQVVISGHADDVPIETEE 187
Query: 99 IALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
R + + + YG+ P V + AKNRR V +
Sbjct: 188 YNSNWELSVSRAINFMTLILENEELDPTLFSAKGYGEFQPIVPNTSAENRAKNRRVEVLI 247
>gi|283850887|ref|ZP_06368173.1| peptidoglycan-associated lipoprotein [Desulfovibrio sp. FW1012B]
gi|283573810|gb|EFC21784.1| peptidoglycan-associated lipoprotein [Desulfovibrio sp. FW1012B]
Length = 171
Score = 75.2 bits (183), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 1/135 (0%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
SG + + + + Q ++ + + F S ++ P Q+L+ ++
Sbjct: 33 GSGTSWEEQERARLEQERALREKMGQAANELAQMINFAFDSSNLTPEARQILTRKADIMK 92
Query: 78 KH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
++ ++EG+ D+ G+ ++ALG RRA A Y GI A R+ SYGKE P
Sbjct: 93 QYPQIKVIVEGNCDQRGTAEYNLALGERRAQAAAQYLSNLGIPADRLSTVSYGKERPLDP 152
Query: 137 GHDEDAYAKNRRAIV 151
G E AYAKNRR
Sbjct: 153 GTGEAAYAKNRRDEF 167
>gi|256370966|ref|YP_003108790.1| OmpA/MotB domain protein [Acidimicrobium ferrooxidans DSM 10331]
gi|256007550|gb|ACU53117.1| OmpA/MotB domain protein [Acidimicrobium ferrooxidans DSM 10331]
Length = 258
Score = 75.2 bits (183), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 50/151 (33%), Gaps = 15/151 (9%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSS----------VGDSVFFDTSSYSIRPADIQ 67
+G + + L L + + D VFF T S ++ P
Sbjct: 97 GAGTPSESQIAQEVNQALAAQGLSQDAQVVVEQRGVVVRILSDKVFFATDSAALGPVGDA 156
Query: 68 VLSNLGSWLEKHDCDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVA-RGISASR 122
V+ + L D IEG+ D +S+ L RA V GI+ R
Sbjct: 157 VVDAIAGVLRTLPNDVSIEGYTDSEPIVGGPYSSNFELSAVRAVTVLERLWKVDGINPDR 216
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ T +G P V A NRR + +
Sbjct: 217 LSATGFGDTHPLVPNTTPQNMAMNRRVDIVI 247
>gi|218887447|ref|YP_002436768.1| peptidoglycan-associated lipoprotein [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218758401|gb|ACL09300.1| peptidoglycan-associated lipoprotein [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 170
Score = 75.2 bits (183), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 5/148 (3%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFS----SSVGDSVFFDTSSYSIRPADI 66
++ + + + E + V+FD + ++
Sbjct: 21 FGCAKKQVAATPESAGAPMAAEDDSARRAQLEALARAQQIITDAKVYFDFDKFDLKAESK 80
Query: 67 QVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
+VL + L+EGH DE G++ ++ALG RRA A + Y V G++A ++++
Sbjct: 81 EVLKQKADVLKKFPSIRVLVEGHCDERGTQEYNLALGERRARAAYEYLVMSGVNAGQLEM 140
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
SYG+E P+V GH+E A++KNRR +
Sbjct: 141 ISYGEERPAVEGHNEAAWSKNRRGEFKI 168
>gi|108763506|ref|YP_633737.1| OmpA domain-containing protein [Myxococcus xanthus DK 1622]
gi|108467386|gb|ABF92571.1| OmpA domain protein [Myxococcus xanthus DK 1622]
Length = 2699
Score = 75.2 bits (183), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 44/119 (36%), Gaps = 2/119 (1%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS--WLEKHDCDFLIEGHADELGS 94
L + + + V+F T I +L + + IEGH D+ G+
Sbjct: 2568 VKVLVDGERIVILEKVYFATGKDVILARSHPLLKQVAAVLRANPQVELVRIEGHTDDQGN 2627
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L RRA V + V GI+ RM+ YG+ P NRR +
Sbjct: 2628 DAKNLDLSQRRANNVRAFLVKEGIAEGRMEAVGYGETKPVDTNKTAKGRENNRRVGFTI 2686
>gi|326563201|gb|EGE13469.1| OmpA family protein [Moraxella catarrhalis 12P80B1]
Length = 551
Score = 75.2 bits (183), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 51/140 (36%), Gaps = 1/140 (0%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
I+ I + + E+ + ++ + F S I + ++L
Sbjct: 389 TAVADSIETARVAIVALGDTVEENEMDILINALNTQIINFALDSTEIPQENKEILDLAAE 448
Query: 75 WLEK-HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
L+ + I GH D G+ + L RA AV Y +++G++A R+ + P
Sbjct: 449 KLKAVPETTLRIIGHTDTQGTHEYNQDLSESRAAAVKEYLLSKGVAAERLNTQGASFDYP 508
Query: 134 SVYGHDEDAYAKNRRAIVFL 153
E +NRR L
Sbjct: 509 VASNATEQGRFQNRRIEFVL 528
>gi|170719951|ref|YP_001747639.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619]
gi|169757954|gb|ACA71270.1| OmpA/MotB domain protein [Pseudomonas putida W619]
Length = 163
Score = 75.2 bits (183), Expect = 2e-12, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 50/141 (35%), Gaps = 6/141 (4%)
Query: 19 SGIDNLDTKISSPDTVLN-----ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+G + K + + V + E ++ + V F + S+ ++ +G
Sbjct: 20 TGCQSTPQKGLTAEQVAVLKREGFAPTDEGWAFDLSGKVLFGSDVDSLNGQSQAIVERIG 79
Query: 74 SWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
L ++GHAD G + L RRA++V + G+ ++ G
Sbjct: 80 KALLGVGIQGVRVDGHADASGKAAYNQQLSERRAHSVAKVLIGIGMPTQNIQTRGLGSTQ 139
Query: 133 PSVYGHDEDAYAKNRRAIVFL 153
P +NRR + +
Sbjct: 140 PVADNRTSLGRTENRRVSIVV 160
>gi|78065049|ref|YP_367818.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383]
gi|77965794|gb|ABB07174.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
Length = 320
Score = 75.2 bits (183), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++ F+T S ++ P +L + + + + I GH D G+R S+IAL RA
Sbjct: 213 NRTIEFETGSATLTPQGRLILDQMAAALAKMQNRTVDIIGHTDNSGNRTSNIALSQARAD 272
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV Y + + I +M T G + P D A+NRR +
Sbjct: 273 AVKGYLITKSILPQQMTTTGVGPDQPIAPNDTADGRARNRRIEFRV 318
>gi|33519799|ref|NP_878631.1| peptidoglycan-associated lipoprotein precursor [Candidatus
Blochmannia floridanus]
gi|33504144|emb|CAD83406.1| peptidoglycan-associated lipoprotein precursor [Candidatus
Blochmannia floridanus]
Length = 174
Score = 75.2 bits (183), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/105 (33%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
+ ++++F Y + P ++L + +IEGH DE G+ +I LG RRA
Sbjct: 68 LKNTIYFSLDQYCVLPIFFEILDLHADFLCNNPLYKIIIEGHTDERGTPEYNIGLGERRA 127
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
YAV Y ++G+ ++++ SYGKE P +G +E++Y+KNRR ++
Sbjct: 128 YAVKKYLQSKGVLSNQIDTVSYGKEKPIAFGQNEESYSKNRRVVL 172
>gi|226950064|ref|YP_002805155.1| chemotaxis motB protein [Clostridium botulinum A2 str. Kyoto]
gi|226842943|gb|ACO85609.1| chemotaxis motB protein [Clostridium botulinum A2 str. Kyoto]
Length = 247
Score = 75.2 bits (183), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 49/126 (38%), Gaps = 5/126 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ + + D+V F+ I+P Q++ + + + +IEGH D +
Sbjct: 112 SSVEVKEDGRGIIIQLRDNVLFEIGRADIKPQSKQIMDKINDLIATLPNEVIIEGHTDNV 171
Query: 93 GS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
S+ L RA V YFV + + R YG+ P + + +KNR
Sbjct: 172 PIKNEVYGSNWELSTARAVNVLRYFVETKKQNPVRFTAAGYGEYRPIAQNNSDANRSKNR 231
Query: 148 RAIVFL 153
R + +
Sbjct: 232 RVNIVI 237
>gi|168180924|ref|ZP_02615588.1| chemotaxis motB protein [Clostridium botulinum NCTC 2916]
gi|237796091|ref|YP_002863643.1| chemotaxis motB protein [Clostridium botulinum Ba4 str. 657]
gi|182668356|gb|EDT80335.1| chemotaxis motB protein [Clostridium botulinum NCTC 2916]
gi|229263486|gb|ACQ54519.1| chemotaxis protein MotB [Clostridium botulinum Ba4 str. 657]
Length = 247
Score = 75.2 bits (183), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 49/126 (38%), Gaps = 5/126 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ + + D+V F+ I+P Q++ + + + +IEGH D +
Sbjct: 112 SSVEVKEDGRGIIIQLRDNVLFEIGRADIKPQSKQIMDKINGLIATLPNEVIIEGHTDNV 171
Query: 93 GS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
S+ L RA V YFV + + R YG+ P + + +KNR
Sbjct: 172 PIKNEVYGSNWELSTARAVNVLRYFVETKKQNPVRFTAAGYGEYRPIAQNNSDANRSKNR 231
Query: 148 RAIVFL 153
R + +
Sbjct: 232 RVNIVI 237
>gi|163749262|ref|ZP_02156511.1| OmpA family protein [Shewanella benthica KT99]
gi|161330981|gb|EDQ01907.1| OmpA family protein [Shewanella benthica KT99]
Length = 220
Score = 75.2 bits (183), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 56/135 (41%), Gaps = 1/135 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH- 79
+ + + T ++ + + ++ + V F + P +VL+++ +++
Sbjct: 83 VQEAELRKQLQSTGVSVTRSGDNIVLNMPNEVTFGVDEVHLNPGAKKVLNSVALVAKEYD 142
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
I G+ D GS + ++ L RA V NY V + + +R+K G+ P
Sbjct: 143 QTQLNILGYTDSSGSESYNLRLSKIRAIEVGNYLVGQNVEYARVKSEGIGEARPISSNTT 202
Query: 140 EDAYAKNRRAIVFLK 154
A+NRR + L
Sbjct: 203 AAGRAQNRRVEIILS 217
>gi|319795794|ref|YP_004157434.1| peptidoglycaN-associated lipoprotein [Variovorax paradoxus EPS]
gi|315598257|gb|ADU39323.1| peptidoglycan-associated lipoprotein [Variovorax paradoxus EPS]
Length = 167
Score = 75.2 bits (183), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/164 (24%), Positives = 68/164 (41%), Gaps = 13/164 (7%)
Query: 1 MQYS-TIFIILSAITMMSISGIDNL-----------DTKISSPDTVLNESSLQEQFSSSV 48
M+ + I I++ ++ + + + + V
Sbjct: 1 MKKNFRILAIVALGASLAACSTPKSGRDDATYYYSNKGAAAVAKVEPPPPAAVQNGPAGV 60
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAY 107
V+FD Y+IRP D +++ S+L+ +IEGH D G R ++ALG RR+
Sbjct: 61 PKIVYFDFDKYNIRPQDQRIVEAHASFLKNRSTSRVVIEGHTDSRGGREYNLALGQRRSE 120
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+V G+ A R++ S+G E P+ E+ Y NRRA
Sbjct: 121 SVQRALTQLGVPAERVEAISWGIEKPASMETTEEGYQLNRRAEF 164
>gi|153834458|ref|ZP_01987125.1| outer membrane protein OmpA [Vibrio harveyi HY01]
gi|148869154|gb|EDL68186.1| outer membrane protein OmpA [Vibrio harveyi HY01]
Length = 318
Score = 75.2 bits (183), Expect = 2e-12, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 43/101 (42%), Gaps = 1/101 (0%)
Query: 54 FDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F +S +++P L + + E + + G+ D G + + +RA +V +
Sbjct: 209 FALNSTTLKPESAAKLDDLVAFLNEYPQANVDVIGYTDTSGPAAYNQKVSEKRAESVAHA 268
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V +GI ASR+ G+ P + +NRR V +
Sbjct: 269 LVEKGIDASRIHARGEGENNPIASNETREGREQNRRVEVVV 309
>gi|85858721|ref|YP_460923.1| peptidoglycan-associated lipopeptide [Syntrophus aciditrophicus SB]
gi|85721812|gb|ABC76755.1| peptidoglycan-associated lipopeptide [Syntrophus aciditrophicus SB]
Length = 210
Score = 75.2 bits (183), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/104 (39%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAV 109
+ F+ S+ P ++L +WL H +IEGH D+LG+ ++ALG RRA
Sbjct: 104 DINFEFDQSSLTPESREILQKHAAWLAAHSGYSLVIEGHCDDLGTTEYNLALGERRAAEA 163
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ VA GI SR+K SYG+EMP E+A AKNRRA +
Sbjct: 164 MRFLVALGIDRSRIKTISYGEEMPLDPAETEEARAKNRRAHFVV 207
>gi|73541910|ref|YP_296430.1| OmpA/MotB [Ralstonia eutropha JMP134]
gi|72119323|gb|AAZ61586.1| OmpA/MotB [Ralstonia eutropha JMP134]
Length = 186
Score = 75.2 bits (183), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 47/143 (32%), Gaps = 8/143 (5%)
Query: 19 SGIDNLDTKISSPDTVLNE-------SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
SG + + V F +I P I +
Sbjct: 41 SGCKTAPPAQGGLTPAQVAVLQQEGFTETDVGWELGRPLKVLFGFDEDAIPPDRIADIRR 100
Query: 72 LGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
LG L ++GH D GS ++ L LRRA AV V G + +++ GK
Sbjct: 101 LGGVLLGVGIDHVRVDGHTDHTGSTEYNLRLSLRRAEAVARVLVTAGFEPANIELRGMGK 160
Query: 131 EMPSVYGHDEDAYAKNRRAIVFL 153
P A+NRRA + +
Sbjct: 161 GRPVADNRTAAGRAENRRASIVV 183
>gi|311031291|ref|ZP_07709381.1| flagellar motor protein MotS [Bacillus sp. m3-13]
Length = 254
Score = 75.2 bits (183), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 47/133 (35%), Gaps = 5/133 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ + V+ + + + + V ++T+ I P L +G+ L K +E
Sbjct: 113 AENDLEDVVVANRTERGIVLVLEEKVLYETAEARILPIAHPFLDKVGTLLTKIPNLVKVE 172
Query: 87 GHADELGS----RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDED 141
GH D S+ L RA +V Y V R YG P V
Sbjct: 173 GHTDNRPISTEKFPSNWELSAARASSVIRYLVDAHDLDPERFIAVGYGDTRPIVENTSNA 232
Query: 142 AYAKNRRAIVFLK 154
Y KNRR + +
Sbjct: 233 NYQKNRRVEIVIS 245
>gi|83643990|ref|YP_432425.1| outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hahella chejuensis KCTC 2396]
gi|83632033|gb|ABC28000.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hahella chejuensis KCTC 2396]
Length = 327
Score = 75.2 bits (183), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 56/139 (40%), Gaps = 6/139 (4%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDS----VFFDTSSYSIRPADIQVLSNLGSW 75
+++ V ++ + + G V+FDT I+P + L+ +
Sbjct: 187 NTQVVESAPMQSGMVKVDAEAMAKGLDAEGHIALYGVYFDTDKADIKPESAETLAEIAKL 246
Query: 76 LEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMP 133
++ LI GH D G+ + + +L RRA AV + V++ A RM G P
Sbjct: 247 MKSQPSLKVLIVGHTDNAGALDYNRSLSERRAKAVMDALVSQYKIGAERMTALGVGMAAP 306
Query: 134 SVYGHDEDAYAKNRRAIVF 152
+E AKNRR +
Sbjct: 307 VASNENEAGKAKNRRVELV 325
>gi|262199850|ref|YP_003271059.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
gi|262083197|gb|ACY19166.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
Length = 266
Score = 75.2 bits (183), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 44/116 (37%), Gaps = 5/116 (4%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGS----RNS 97
Q + V F + + + LS + + +E D FL+ GH D +
Sbjct: 135 QMVLKLPSEVLFPSGRAKLSDKGQEALSEVLNILMEFKDRRFLVAGHTDAVKIRGGRFKD 194
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA +V +Y V G + + YG+ P + A NRR + L
Sbjct: 195 NWDLSTARAVSVVDYMVEAGFDPNNLGAAGYGEFDPVAPNDTAENRALNRRIEIIL 250
>gi|120599218|ref|YP_963792.1| OmpA domain-containing protein [Shewanella sp. W3-18-1]
gi|146292708|ref|YP_001183132.1| OmpA domain-containing protein [Shewanella putrefaciens CN-32]
gi|120559311|gb|ABM25238.1| OmpA domain protein [Shewanella sp. W3-18-1]
gi|145564398|gb|ABP75333.1| OmpA domain protein [Shewanella putrefaciens CN-32]
gi|319426012|gb|ADV54086.1| peptidoglycan-associated lipoprotein [Shewanella putrefaciens 200]
Length = 178
Score = 75.2 bits (183), Expect = 2e-12, Method: Composition-based stats.
Identities = 46/177 (25%), Positives = 73/177 (41%), Gaps = 25/177 (14%)
Query: 1 MQYSTIF-IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG---------- 49
M + + +L A+ +M+IS + + N S
Sbjct: 1 MDLNKLLKAMLVALPIMAISACSSTSESETDAMGSTNGSGSGLNGGGVQTGGIGGMLSPE 60
Query: 50 -------------DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
++FD ++ +L G++ +E LIEGHADE G+
Sbjct: 61 EQQRQQLEELRREHIIYFDFDRSEVQTEFAAILEAHGTYLVEHPSVRVLIEGHADERGTP 120
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+IALG RRA AV Y G+ S+M V SYG+E P + ++ + KNRRA++
Sbjct: 121 EYNIALGERRAKAVAKYLQGMGVQPSQMSVVSYGEEKPLDFSRTDEGFGKNRRAVLV 177
>gi|167467398|ref|ZP_02332102.1| possible OmpA/MotB family protein [Yersinia pestis FV-1]
Length = 263
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 43/123 (34%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
++ F S ++RP I V+ + + + LI GH D +
Sbjct: 139 VSVDETSNNSKVIFKGDSMFMVGSDNVRPEMIDVIKRVAQEVHRVKGAILIVGHTDSMPI 198
Query: 95 RNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
L +RA V Y GI +++ G+ P D ++NRR
Sbjct: 199 NKPGFPNNQVLSEKRAANVARYMEQAGIPTDKIRFEGKGETQPVSSNDDATGRSQNRRVE 258
Query: 151 VFL 153
+F+
Sbjct: 259 IFV 261
>gi|262275459|ref|ZP_06053269.1| lipoprotein precursor OmpA family [Grimontia hollisae CIP 101886]
gi|262220704|gb|EEY72019.1| lipoprotein precursor OmpA family [Grimontia hollisae CIP 101886]
Length = 223
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 52/116 (44%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRN 96
E+ EQ S + V F S+ P ++L+ + + I GH D +GS
Sbjct: 97 ETPKVEQGSGGLVAKVHFGFDKASLTPTGKKILAGIVDSITTSSTPLTITGHTDSVGSHA 156
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
++ LGL+RA +V Y V G + +++K S G+ P A+NRR V
Sbjct: 157 YNLTLGLKRAESVKGYLVDAGKNNAQIKTVSAGETKPVTTNETAKGRAENRRVDVV 212
>gi|149190419|ref|ZP_01868691.1| outer membrane protein A [Vibrio shilonii AK1]
gi|148835798|gb|EDL52763.1| outer membrane protein A [Vibrio shilonii AK1]
Length = 343
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 50/134 (37%), Gaps = 1/134 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
D+K + + + V SV F S I + + +
Sbjct: 200 SSAEDSKPETQTEPKPVTPIITTRLPEVHSSVLFAFDSEKIEN-VEALNPIVYRLTRYPE 258
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ G+ D G + +L RRA AV+ Y G+S +++V YG++ P V
Sbjct: 259 TRATVYGYTDSTGPNEYNQSLSERRANAVYEYLKHAGVSTEQLRVAGYGEDSPVVPNDTT 318
Query: 141 DAYAKNRRAIVFLK 154
+ NRR V ++
Sbjct: 319 EHRHMNRRVTVHIE 332
>gi|75676006|ref|YP_318427.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255]
gi|74420876|gb|ABA05075.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255]
Length = 321
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 58/143 (40%), Gaps = 3/143 (2%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
A+ ++ I+ ++ ++ ++ + + Q ++ + FD ++R L
Sbjct: 176 ALALLEITEAKPMEERMVVVESSAMQRDIASQGRVAI-HGILFDFDKDTMRSDSKPQLDE 234
Query: 72 LGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYG 129
+ L+ LI GH D G+ + + L RRA ++ G++A+R+ G
Sbjct: 235 IAKLLKAQPELKVLIVGHTDSKGALDYNRDLSYRRARSIVESLSREHGVAAARLTPLGVG 294
Query: 130 KEMPSVYGHDEDAYAKNRRAIVF 152
P E+ A NRR +
Sbjct: 295 MAAPMATNRTEEGRALNRRVELV 317
>gi|187779120|ref|ZP_02995593.1| hypothetical protein CLOSPO_02715 [Clostridium sporogenes ATCC
15579]
gi|187772745|gb|EDU36547.1| hypothetical protein CLOSPO_02715 [Clostridium sporogenes ATCC
15579]
Length = 254
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 51/135 (37%), Gaps = 5/135 (3%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF 83
+ K S + + + D V F++ + +L+ + L+ D +
Sbjct: 100 KEIKKSGYSDKVKVGVDADGLEIDIQDVVLFNSGDAEVLKQSSALLTQISKMLKGLDNNI 159
Query: 84 LIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGH 138
I GH D S+ L RA V N+ G +++ + +YG+ MP
Sbjct: 160 KITGHTDNKPISNSKFRSNWDLSAIRAINVMNFLSNIGGIPANKLSIQAYGEYMPKFDNA 219
Query: 139 DEDAYAKNRRAIVFL 153
E AKNRR + +
Sbjct: 220 TEVGRAKNRRVEIAI 234
>gi|189424872|ref|YP_001952049.1| peptidoglycan-associated lipoprotein [Geobacter lovleyi SZ]
gi|189421131|gb|ACD95529.1| peptidoglycan-associated lipoprotein [Geobacter lovleyi SZ]
Length = 185
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 3/134 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN--LGSWLEKH 79
++ + P L S+ + + S+ +V+FD +R +L+ +
Sbjct: 51 AAPKSEPAKPTDQLQNSTAKASAAVSL-QTVYFDFDRSDLRQDSRDMLTKNAQALMKDLV 109
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
D IEGH DE GS ++ALG RRA AV Y + G+ R+ S+GKE P++ G D
Sbjct: 110 DSKIKIEGHCDERGSDEYNLALGDRRAKAVATYLITLGVKQDRISTVSFGKEKPAMQGSD 169
Query: 140 EDAYAKNRRAIVFL 153
E A++KNRRA +
Sbjct: 170 ETAWSKNRRAEFVI 183
>gi|320157195|ref|YP_004189574.1| flagellar motor rotation protein MotB [Vibrio vulnificus MO6-24/O]
gi|319932507|gb|ADV87371.1| flagellar motor rotation protein MotB [Vibrio vulnificus MO6-24/O]
Length = 300
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 47/128 (36%), Gaps = 5/128 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ +L +Q + + F S ++P ++ + ++ I GH D
Sbjct: 156 QGAIEVENLGQQIVIRMREKGAFPEGSAFLQPKFRPLVRQIAELVKDVPGIVRISGHTDN 215
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S+ L +RA +V RG S R++V P V E+ A+N
Sbjct: 216 QRLDSELYRSNWDLSAQRAVSVAQEMEKVRGFSHQRLRVRGMADTDPLVDNDTEENRARN 275
Query: 147 RRAIVFLK 154
RR + +
Sbjct: 276 RRVEISIM 283
>gi|17545455|ref|NP_518857.1| peptidoglycan-associated lipoprotein precursor [Ralstonia
solanacearum GMI1000]
gi|17427747|emb|CAD14266.1| probable peptidoglycan-associated lipoprotein precursor [Ralstonia
solanacearum GMI1000]
Length = 172
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 2/129 (1%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDF 83
DT+ +P V + + S SV+FD SY+++P +L+ +L+ H
Sbjct: 44 DTRNVTPVDVSRDELT-DPNSPLAKRSVYFDFDSYTVKPEYQGLLTQHARYLQSHNQRKV 102
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
LI+G+ DE G+ ++ALG +RA AV + G+ S+M+ S GKE P GHDE+++
Sbjct: 103 LIQGNTDERGTSEYNLALGQKRAEAVRRALSSLGVPDSQMESVSLGKEKPQASGHDEESW 162
Query: 144 AKNRRAIVF 152
A+NRR+ +
Sbjct: 163 AQNRRSDIV 171
>gi|119356692|ref|YP_911336.1| OmpA/MotB domain-containing protein [Chlorobium phaeobacteroides
DSM 266]
gi|119354041|gb|ABL64912.1| OmpA/MotB domain protein [Chlorobium phaeobacteroides DSM 266]
Length = 162
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 73/159 (45%), Gaps = 11/159 (6%)
Query: 7 FIILSAITMMSISGIDNLDTKISSPDTVLNESSLQ----------EQFSSSVGDSVFFDT 56
++ + + + + + +SS + +S +++ VF+D
Sbjct: 4 LMVTAGCSSKNAVNTQDGNAGLSSGQSGWGTTSSSVAQSPSGYGFDEWQKGPLGDVFYDF 63
Query: 57 SSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA 115
S + + L+ W++ + +I+GH D+ G+ ++ALG RRA + + +
Sbjct: 64 DSSLLSSEAQEQLTRNSGWMKSNVQAAIIIQGHCDDRGTSEYNLALGDRRAVSAREFLIR 123
Query: 116 RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
GI++SR++ ++G+E P E+ AKNRRA +K
Sbjct: 124 TGIASSRIETITFGEERPFSTSQSEEGLAKNRRAHFVIK 162
>gi|326794296|ref|YP_004312116.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
gi|326545060|gb|ADZ90280.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
Length = 334
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 47/127 (37%), Gaps = 5/127 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ + ++ + + D F++ S + I V+ + L + +EGH D +
Sbjct: 166 GTVEVETQEQTITIRLKDKGSFESGSAELNFDFIPVIDMVREVLIGVKGNISVEGHTDNI 225
Query: 93 GS----RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
S+ L R+ AV A G +R VT + P V A NR
Sbjct: 226 PIESRRFQSNWQLSSARSIAVAEELFATGALDQNRFSVTGFADTRPLVPNDTSANRATNR 285
Query: 148 RAIVFLK 154
R + +K
Sbjct: 286 RVEIVIK 292
>gi|323700864|ref|ZP_08112776.1| OmpA/MotB domain protein [Desulfovibrio sp. ND132]
gi|323460796|gb|EGB16661.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans ND132]
Length = 392
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 54/134 (40%), Gaps = 4/134 (2%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD- 82
+ ++ E S V ++ FD +I+PA + VL LG L +
Sbjct: 253 QPVQGAAARKEPAEDEAPRPGISGVDLNIQFDFDKATIQPASLAVLDALGETLNSPEFKG 312
Query: 83 --FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHD 139
++ GH D G ++ L +RA AV +Y V + + ++ +GK P G
Sbjct: 313 RSIIVGGHTDASGGAEYNLTLSKQRAEAVKSYLVDKWHINPDLIEAVGFGKSRPLTEGTT 372
Query: 140 EDAYAKNRRAIVFL 153
+NRR + L
Sbjct: 373 AADQQRNRRVEIRL 386
>gi|312174309|emb|CBX82562.1| putative outer membrane lipoprotein yiaD precursor [Erwinia
amylovora ATCC BAA-2158]
Length = 221
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 64/124 (51%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD+SS +++PA L+ + L+++ + G+ D
Sbjct: 95 GTGVSVTRSGDNIVLNMPNNVTFDSSSSTLKPAGANTLTGVAMVLKEYPKTAVNVVGYTD 154
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GSR ++ L +RA V + +A+G++A+R++ G + P + A+NRR
Sbjct: 155 SSGSRQLNMNLSQQRADGVGSALIAQGVAANRVRTNGMGSDNPVASNSSAEGKAQNRRVE 214
Query: 151 VFLK 154
+ L
Sbjct: 215 ITLS 218
>gi|148975972|ref|ZP_01812761.1| Conserved hypothetical outer membrane protein [Vibrionales
bacterium SWAT-3]
gi|145964717|gb|EDK29970.1| Conserved hypothetical outer membrane protein [Vibrionales
bacterium SWAT-3]
Length = 211
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 47/106 (44%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
+ + F +S+ P + LS L S L+ ++GH D G + ALG++RA
Sbjct: 96 GLLARIHFAFDQHSLTPMGSKALSQLASELQTSGSSVTVDGHTDSSGDEGYNQALGMQRA 155
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ + G+ + + S+G+ P + A NRRA ++
Sbjct: 156 LTTSDALIVDGVDKHHLVIRSFGESKPIASNETVEGRANNRRAEIW 201
>gi|303328323|ref|ZP_07358761.1| peptidoglycan-associated lipoprotein [Desulfovibrio sp. 3_1_syn3]
gi|302861653|gb|EFL84589.1| peptidoglycan-associated lipoprotein [Desulfovibrio sp. 3_1_syn3]
Length = 155
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 3/154 (1%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ + + L + + + G T D L ++ V+F ++
Sbjct: 1 MKRYALILAL-VMALAAGFGCAKKTTGEPGYDDGLT-PEMRAAIQQITDARVYFAFDKFN 58
Query: 61 IRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
I+P +L + IEG+ D+ G++ ++ALG RRA A + Y V G++
Sbjct: 59 IQPEYKDMLKTKAELMKKYPSIRVRIEGNCDDRGTQEYNLALGERRARAAYEYLVTLGVN 118
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S++++ SYGKE P+V G E +AKNRR +
Sbjct: 119 PSQLEMISYGKENPAVQGTGEAVWAKNRRDDFRV 152
>gi|30314438|gb|AAP15428.1| outer membrane lipoprotein precursor [Burkholderia cepacia]
gi|30314440|gb|AAP15429.1| outer membrane lipoprotein precursor [Burkholderia stabilis]
gi|30314446|gb|AAP15432.1| outer membrane lipoprotein precursor [Burkholderia vietnamiensis]
Length = 150
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 43/137 (31%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 18 ISGIDNLDTKISSPDTV-LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+ + T+ S+ + +N L + S S++FD SYS++ ++ +L
Sbjct: 11 ANNAGAVSTQPSADNVAQVNVDPLNDPNSPLAKRSIYFDFDSYSVKDDYQSLMQQHAQYL 70
Query: 77 EKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+ H LI+G+ DE G+ ++ALG +RA AV G++ S+M+ S GKE P
Sbjct: 71 KSHPQRHVLIQGNTDERGTSEYNLALGQKRAEAVRRAMALLGVNDSQMEAVSLGKEKPQA 130
Query: 136 YGHDEDAYAKNRRAIVF 152
GHDE ++A+NRRA +
Sbjct: 131 TGHDEASWAQNRRADLV 147
>gi|262373123|ref|ZP_06066402.1| peptidoglycan-associated lipoprotein [Acinetobacter junii SH205]
gi|262313148|gb|EEY94233.1| peptidoglycan-associated lipoprotein [Acinetobacter junii SH205]
Length = 188
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 46/178 (25%), Positives = 75/178 (42%), Gaps = 27/178 (15%)
Query: 1 MQYSTIFI-ILSAITMMSIS----------------GIDNLDTKISSPDTVLNESSLQEQ 43
M + + ++A + + G ++T S D LN +L
Sbjct: 1 MNIKYLTLPFIAATLVFTGCASRKPAAEITSGNTPNGATTVNTSGLSEDAALNAQNLAGA 60
Query: 44 FSSSV---------GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELG 93
S V V FD S + D Q L + + + + GH DE G
Sbjct: 61 SSKGVTAANKAFLAKRVVHFDYDSSDLSNEDYQTLQAHAQFLVANANSRVALTGHTDERG 120
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+R ++ALG RRA AV ++ + G++ +++ SYGKE P GH+E A+ +NRR +
Sbjct: 121 TREYNMALGERRAKAVESFLITNGVNPQQLEAVSYGKEAPVNAGHNEAAWKENRRVEI 178
>gi|77456921|ref|YP_346426.1| OmpA/MotB [Pseudomonas fluorescens Pf0-1]
gi|77380924|gb|ABA72437.1| putative lipoprotein [Pseudomonas fluorescens Pf0-1]
Length = 166
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 48/141 (34%), Gaps = 6/141 (4%)
Query: 20 GIDNLDTKISSPDTVLNESS-----LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
G K +P V + + + V F + S+ +++ +G
Sbjct: 24 GCQTAPQKGLTPAQVAVLKQQGFELTDDGWEFGLSGKVLFGSDVESLNKQSTEIVERIGK 83
Query: 75 WLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
L ++GH D G + L LRRA +V N + G+ +++ G P
Sbjct: 84 ALLGVGIERVRVDGHTDASGKETYNQQLSLRRAKSVSNVLTSVGMKQENIQLQGLGSREP 143
Query: 134 SVYGHDEDAYAKNRRAIVFLK 154
+NRR + +
Sbjct: 144 VASNDTAAGRTENRRVSIVVS 164
>gi|325067558|ref|ZP_08126231.1| OmpA/MotB domain protein [Actinomyces oris K20]
Length = 394
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 50/133 (37%), Gaps = 3/133 (2%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLI 85
S D + ++ + +V V F T S + VL+N+ ++K D I
Sbjct: 87 TLSADGASDTKQDEKSTTVTVAGDVTFATDSDQLSDQADGVLANVVEQIKKFPSGGDLTI 146
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYA 144
GH D++ + L RRA AV + V+ G+ P V ++
Sbjct: 147 TGHTDDVADDAHNQDLSERRAKAVSERLKKLTDLSKWKESVSGKGESSPRVPNDSDEHRQ 206
Query: 145 KNRRAIVFLKGCR 157
NRR + L +
Sbjct: 207 ANRRVEITLMPSK 219
>gi|253699032|ref|YP_003020221.1| OmpA/MotB domain protein [Geobacter sp. M21]
gi|251773882|gb|ACT16463.1| OmpA/MotB domain protein [Geobacter sp. M21]
Length = 459
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/127 (22%), Positives = 54/127 (42%), Gaps = 2/127 (1%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEG 87
+ + V + V FD IRP ++ +G++++++ +IEG
Sbjct: 203 APLEPVPAAEPAPGHYKYCVTLQGEFDIDKAEIRPEYKDEVATVGNFMKQYPTTTAVIEG 262
Query: 88 HADELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
H D +G+ ++ L RRA +V +Y GI SR++ +G P ++ N
Sbjct: 263 HTDNVGNPEYNLDLSKRRAQSVVDYLVDNYGIERSRLEARGFGMARPIAANSTDEGRQAN 322
Query: 147 RRAIVFL 153
RR +
Sbjct: 323 RRIEAII 329
Score = 63.7 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 2/102 (1%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FD+ I+P ++ +G ++ K+ +IEGH D +G + ++ L +RA Y
Sbjct: 352 FDSGKADIKPLYRGEMAKVGEYMNKYPTTTAVIEGHTDNVGGSDYNMKLSQQRAENAVQY 411
Query: 113 FVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V I SR+ YG Y + AKNRR +
Sbjct: 412 LVQNFGIDKSRLSAKGYGYTRRIAYNSTPEGRAKNRRINAVI 453
>gi|163802616|ref|ZP_02196508.1| flagellar basal body P-ring biosynthesis protein A [Vibrio sp.
AND4]
gi|159173699|gb|EDP58518.1| flagellar basal body P-ring biosynthesis protein A [Vibrio sp.
AND4]
Length = 315
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 43/101 (42%), Gaps = 1/101 (0%)
Query: 54 FDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F +S +++P L + + E + G+ D G + + +RA +V N
Sbjct: 206 FALNSTTLKPESASKLDDLVAFLNEYPQATVGVIGYTDTSGPAAYNQKVSEKRAESVANA 265
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V +GI ASR++ G+ P + +NRR V +
Sbjct: 266 LVEKGIDASRIQARGEGENNPIASNETREGREQNRRVEVVV 306
>gi|118443271|ref|YP_877986.1| chemotaxis motB protein [Clostridium novyi NT]
gi|118133727|gb|ABK60771.1| chemotaxis motB protein [Clostridium novyi NT]
Length = 241
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 60/137 (43%), Gaps = 5/137 (3%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI 85
T ++ D+ + + +++ FD+ ++ + ++L + + +E +I
Sbjct: 102 TSKNNLDSTVQVKKDARGIILELKENILFDSGQADLKLSSKEILDKISALIESVPNGIII 161
Query: 86 EGHADELGSRNS----SIALGLRRAYAVFNYFV-ARGISASRMKVTSYGKEMPSVYGHDE 140
EGH D + NS + L +RA V YFV ++G + + YG+ P +
Sbjct: 162 EGHTDNVPIHNSKYDSNWELSTQRAVNVLKYFVVSKGEKPEKFQAAGYGEYHPIAKNDNY 221
Query: 141 DAYAKNRRAIVFLKGCR 157
AKNRR + + G +
Sbjct: 222 VDRAKNRRVNILIVGEK 238
>gi|74318223|ref|YP_315963.1| outer membrane protein, porin-associated lipoprotein [Thiobacillus
denitrificans ATCC 25259]
gi|74057718|gb|AAZ98158.1| outer membrane protein, porin-associated lipoprotein [Thiobacillus
denitrificans ATCC 25259]
Length = 188
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 43/136 (31%), Positives = 69/136 (50%), Gaps = 2/136 (1%)
Query: 19 SGIDNLDTKISS-PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-L 76
+G+D + S+ P +E ++ SVFFD S+ ++ VL +
Sbjct: 49 TGVDGAGVEGSALPGDQAAGDPRKEPANALSKRSVFFDFDSFVVKDEYRPVLEAHAGYLA 108
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
K D ++G+ADE GSR ++ALG +RA AV G+S ++M+ S+G+E P
Sbjct: 109 SKRDARITLQGNADERGSREYNLALGQKRAEAVRKALAVLGVSDAQMEAISFGEEKPRNE 168
Query: 137 GHDEDAYAKNRRAIVF 152
E+AYA+NRR +
Sbjct: 169 ADTEEAYAENRRTDIV 184
>gi|6119896|gb|AAF04276.1|AF181881_2 PAL [Helicobacter pylori]
Length = 157
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 2/155 (1%)
Query: 1 MQYSTIFIILSA--ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSS 58
M T+ +SA + ++ + + + S ++ S++FD
Sbjct: 1 MDNKTVAGDVSAKTVQTAPVTTEPAPEKEEPKQEPAPVVEEKPAVESGTIIASIYFDFDK 60
Query: 59 YSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI 118
Y I+ +D + L + +++ L+EG+ DE GS + ALG++R +V N V +G+
Sbjct: 61 YEIKESDQETLDEIVQKAKENHMQVLLEGNTDEFGSSEYNQALGVKRTLSVKNALVIKGV 120
Query: 119 SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+K S+G+ P + Y +NRR V L
Sbjct: 121 EKDMIKTISFGETKPKCAQKTRECYKENRRVDVKL 155
>gi|84685242|ref|ZP_01013141.1| OmpA domain protein [Maritimibacter alkaliphilus HTCC2654]
gi|84666974|gb|EAQ13445.1| OmpA domain protein [Rhodobacterales bacterium HTCC2654]
Length = 797
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 37/143 (25%), Positives = 56/143 (39%), Gaps = 4/143 (2%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
+++S + LD S P + + E + G + F S I + + +
Sbjct: 464 VNVSYDEALDPIASLPSPEECVAMINETIA---GSKITFAPGSVEIEASAAATIDKIADV 520
Query: 76 LEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
L + I GH D GS + AL +RA +V N +AR I S + YG+E+P
Sbjct: 521 LRDCAEVPMEIGGHTDSQGSEELNKALSQQRANSVLNALLARRILTSNIVAHGYGEEVPI 580
Query: 135 VYGHDEDAYAKNRRAIVFLKGCR 157
E NRR L R
Sbjct: 581 ADNDTEAGREANRRIEFRLISQR 603
>gi|325982116|ref|YP_004294518.1| OmpA/MotB domain-containing protein [Nitrosomonas sp. AL212]
gi|325531635|gb|ADZ26356.1| OmpA/MotB domain protein [Nitrosomonas sp. AL212]
Length = 237
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 4/127 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHAD 90
DTV + ++ D F + I V+ NL + + LIEGH D
Sbjct: 105 DTVPPLDVIDRPRILAIFDGKTFRSGQDIIHDVSHSVIDNLIKEISASPNSRILIEGHTD 164
Query: 91 ELGSRN---SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+ + ++ L RRA A+ N + G+ A+R+ + YG + P V ++ AKNR
Sbjct: 165 NIPTGKISSDNMDLSRRRARAIANVLILHGVPATRISIIGYGDKRPIVSNATDEGRAKNR 224
Query: 148 RAIVFLK 154
R V L
Sbjct: 225 RVEVKLM 231
>gi|163784521|ref|ZP_02179383.1| OmpA domain protein [Hydrogenivirga sp. 128-5-R1-1]
gi|159880207|gb|EDP73849.1| OmpA domain protein [Hydrogenivirga sp. 128-5-R1-1]
Length = 75
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 33/71 (46%)
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
+IEGH D GS ++ L L+RA + F++ G S + V YG P
Sbjct: 1 IIEGHTDNTGSYKLNLDLSLKRALYIMKMFISCGFSPDLLSVRGYGPSRPIADNSTPKGR 60
Query: 144 AKNRRAIVFLK 154
AKNRR +K
Sbjct: 61 AKNRRVEFVIK 71
>gi|242281268|ref|YP_002993397.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
gi|242124162|gb|ACS81858.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
Length = 242
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 2/134 (1%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK-HDCDF 83
D ++ D L + E + + D + F + +L L L+ D
Sbjct: 103 DMDRATLDENLKVLAKPEGVALVLTDKLMFPLGKSELDERAKILLYQLVPVLDYLGSADV 162
Query: 84 LIEGHADELG-SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
I G+ D +G R S+ L RA AV YFV +GI R+ V++ G P +
Sbjct: 163 NIAGYTDNVGGMRPSNFRLSGERAMAVLTYFVEQGIMNDRLTVSACGPTFPLYSNTTPEG 222
Query: 143 YAKNRRAIVFLKGC 156
A+NRR + +K
Sbjct: 223 RAQNRRVEILIKTT 236
>gi|254462550|ref|ZP_05075966.1| flagellar MotB protein [Rhodobacterales bacterium HTCC2083]
gi|206679139|gb|EDZ43626.1| flagellar MotB protein [Rhodobacteraceae bacterium HTCC2083]
Length = 411
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 44/115 (38%), Gaps = 6/115 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS-----RNSSIA 100
++G F + S S+ A +++ L + D ++ GH D + +
Sbjct: 294 VNLGSGGAFPSGSASLTGAAQAIVAELAATTNDPDSSVVVAGHTDNVPIGFGALYRDNWD 353
Query: 101 LGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L RA +V + R M TSYG+ P + KNRR + ++
Sbjct: 354 LAAARAASVVQEIEGLNLVPEREMSATSYGEARPIADNDTPEGREKNRRIEIEIE 408
>gi|149277383|ref|ZP_01883524.1| outer membrane protein 3a [Pedobacter sp. BAL39]
gi|149231616|gb|EDM36994.1| outer membrane protein 3a [Pedobacter sp. BAL39]
Length = 657
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 44/119 (36%), Gaps = 7/119 (5%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIA 100
E V V ++ + L L + ++ D D + H D G+ ++
Sbjct: 536 EPEKPIVLKDVLYEFDKADLTELSKGKLDYLYTILIDNPDIDIELSAHTDNKGTAEYNMD 595
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG------HDEDAYAKNRRAIVFL 153
L RRA + +Y V +GI A RM YG P + + A NRR +
Sbjct: 596 LSNRRAQSCLDYLVTKGIPAERMTSKGYGLTKPVAPNQFSDGKDNPEGRAMNRRTEFKV 654
>gi|258621630|ref|ZP_05716662.1| flagellar motor protein [Vibrio mimicus VM573]
gi|262165143|ref|ZP_06032880.1| Flagellar motor rotation protein MotB [Vibrio mimicus VM223]
gi|258586102|gb|EEW10819.1| flagellar motor protein [Vibrio mimicus VM573]
gi|262024859|gb|EEY43527.1| Flagellar motor rotation protein MotB [Vibrio mimicus VM223]
Length = 319
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 43/127 (33%), Gaps = 5/127 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ +L +Q + + F S ++P ++ + ++ + GH D
Sbjct: 173 QGAIEVENLGQQIDIRIREKGAFPEGSAFLQPKFRPLVRQIADLVKDIPGKVRVTGHTDN 232
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S+ L +RA +V +G R++V P E A N
Sbjct: 233 QKLDSELYRSNWDLSAQRAVSVAQEMEKVKGFDHQRLQVRGMADTQPIGPNDTEAQRALN 292
Query: 147 RRAIVFL 153
RR + +
Sbjct: 293 RRVEISI 299
>gi|157148115|ref|YP_001455434.1| putative outer membrane lipoprotein [Citrobacter koseri ATCC
BAA-895]
gi|157085320|gb|ABV14998.1| hypothetical protein CKO_03925 [Citrobacter koseri ATCC BAA-895]
Length = 160
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/158 (18%), Positives = 56/158 (35%), Gaps = 4/158 (2%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLD--TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSS 58
M I+ +++ + + + +S + D++ FD +
Sbjct: 1 MLKRLFSPIILIALILAGCQTPQRKFTPEQVAAMKSYGFTESAGDWSLGLSDNILFDKND 60
Query: 59 YSIRPADIQVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARG 117
Y +RP Q + + S L ++GH D G + + AL L+RA V + +
Sbjct: 61 YKLRPESQQQIREMASRLAATGLKHARMDGHTDNYGEDSYNEALSLKRANVVADAWAEGA 120
Query: 118 ISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ GK+ P A+NRR V +
Sbjct: 121 NIPRSNLTTQGLGKKHPVASNQSAKGRAENRRVAVVIS 158
>gi|238783060|ref|ZP_04627087.1| Inner membrane lipoprotein yiaD [Yersinia bercovieri ATCC 43970]
gi|238716061|gb|EEQ08046.1| Inner membrane lipoprotein yiaD [Yersinia bercovieri ATCC 43970]
Length = 219
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FDT S +++PA L+ + L+++D + G D
Sbjct: 94 GTGVSVTRQGDNIVLNMPNNVTFDTDSSNLKPAGANTLTGVAMVLKEYDKTAVNVTGFTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G+R ++ L +RA +V + + +G++A+R++ + G + P A+NRR
Sbjct: 154 SSGARAHNMTLSQQRADSVGSALIMQGVAANRVRTSGAGPDNPVASNSTAAGKAQNRRVE 213
Query: 151 VFLK 154
+ L
Sbjct: 214 ITLS 217
>gi|326571329|gb|EGE21346.1| OmpA family protein [Moraxella catarrhalis BC8]
Length = 551
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 51/140 (36%), Gaps = 1/140 (0%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
I+ I + + E+ + ++ + F S I + ++L
Sbjct: 389 TAVADSIETARVAIVALGDTVEENEMDILINALNTQVINFALDSTEIPQENKEILDLAAE 448
Query: 75 WLEK-HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
L+ + I GH D G+ + L RA AV Y V++G++A R+ + P
Sbjct: 449 KLKAVPETTLRIIGHTDTQGTHEYNQDLSESRAAAVKEYLVSKGVAAERLNTQGASFDYP 508
Query: 134 SVYGHDEDAYAKNRRAIVFL 153
E +NRR L
Sbjct: 509 VASNATEQGRFQNRRIEFVL 528
>gi|319955316|ref|YP_004166583.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
gi|319423976|gb|ADV51085.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
Length = 238
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 3/135 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDS--VFFDTSSYSIRPADIQVLSNLGSWLEKH 79
D +I + + E + + V+FDT+ ++ +L L L+++
Sbjct: 89 DKQAERIEEEIPGAEVTRVGEGINVVFNEDAGVYFDTNKSVVKGTSATILDRLVGILKEY 148
Query: 80 D-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ L+EGH D G + ++ L +RA +V +Y GIS++R+ YG+ P
Sbjct: 149 PDSNILVEGHTDSAGPADYNMNLSKQRAESVTSYLNTHGISSNRLTTKWYGETQPKSDNS 208
Query: 139 DEDAYAKNRRAIVFL 153
+ AKNRR + +
Sbjct: 209 TTEGKAKNRRVEMVI 223
>gi|308273873|emb|CBX30473.1| hypothetical protein N47_K27130 [uncultured Desulfobacterium sp.]
gi|308275118|emb|CBX31717.1| hypothetical protein N47_E52290 [uncultured Desulfobacterium sp.]
Length = 355
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 1/121 (0%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADE 91
+ + + + V+FDT+ ++I +L N+ S + D ++GH D
Sbjct: 232 PNTPKGATVDCRGCWILQGVYFDTAKWNILSKYFPILDNVVSVIKKNPDMKLEVQGHTDS 291
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
G+ + L RA +V YFV++G+ S + +G +P+ + + AKNRR +
Sbjct: 292 RGTAKYNRKLSENRAKSVVEYFVSKGVDRSILTAKGFGFTVPAAPNDNAEDMAKNRRVEL 351
Query: 152 F 152
Sbjct: 352 K 352
>gi|169825896|ref|YP_001696054.1| chemotaxis protein motB [Lysinibacillus sphaericus C3-41]
gi|168990384|gb|ACA37924.1| Chemotaxis protein motB (Motility protein B) [Lysinibacillus
sphaericus C3-41]
Length = 235
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 50/134 (37%), Gaps = 6/134 (4%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLI 85
++ + E ++ DS+ FD +I+P I + L + + +I
Sbjct: 88 AVNEMEGQFATEMTDEGLLVTIRDSILFDPGQATIKPEYIPIAKELADVLVSNPPRNIVI 147
Query: 86 EGHADELG---SRNSSIALGLRRAYAVFNYF--VARGISASRMKVTSYGKEMPSVYGHDE 140
GH D + + +S++ L L RA + + + YG+
Sbjct: 148 TGHTDNVPAGPNFSSNLELSLMRASNFYMVLLDSNSQLKSENFSAKGYGENRAIAPNDTA 207
Query: 141 DAYAKNRRAIVFLK 154
+ AKNRR V ++
Sbjct: 208 EGRAKNRRVEVLIQ 221
>gi|157374383|ref|YP_001472983.1| OmpA/MotB domain-containing protein [Shewanella sediminis HAW-EB3]
gi|157316757|gb|ABV35855.1| OmpA/MotB domain protein [Shewanella sediminis HAW-EB3]
Length = 189
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 55/141 (39%), Gaps = 1/141 (0%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
++ +G + + + S + F+ + + + + L+ L
Sbjct: 45 ALVDAAGCEKQTEFENICLSTTAGEVYPPSCSELSELPLNFEFAKAEVMFSQWKTLARLK 104
Query: 74 SWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEM 132
+L++ D + + G+ D +GS + + L +RA AV V G S+SR V G E
Sbjct: 105 QFLQRFDVNLCLLGYTDAMGSLDLNQKLSAQRAMAVKQILVEDYGFSSSRFVVKGMGSES 164
Query: 133 PSVYGHDEDAYAKNRRAIVFL 153
P + A NRR +
Sbjct: 165 PIASNEKPEGRASNRRVEFVV 185
>gi|327438679|dbj|BAK15044.1| flagellar motor protein [Solibacillus silvestris StLB046]
Length = 251
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 48/135 (35%), Gaps = 7/135 (5%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLI 85
I+ + E ++ DS+ FD ++ + L + + +I
Sbjct: 105 AINELEDQFETKMTDEGLLITIRDSILFDMGRADVKAEYDTIADELAQLLMFDPPRNVVI 164
Query: 86 EGHADELGS----RNSSIALGLRRAYAVFNYFV--ARGISASRMKVTSYGKEMPSVYGHD 139
GH D + +S+ L + RA V + + V +G+ P
Sbjct: 165 TGHTDNVPIKTPEFDSNWDLSVMRAVNFMKEIVSGNEQLDSKYFSVKGFGEFQPIATNDT 224
Query: 140 EDAYAKNRRAIVFLK 154
++ AKNRR V ++
Sbjct: 225 QEGRAKNRRVEVLVQ 239
>gi|313205367|ref|YP_004044024.1| ompa/motb domain protein [Paludibacter propionicigenes WB4]
gi|312444683|gb|ADQ81039.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4]
Length = 446
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 56/133 (42%), Gaps = 1/133 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FL 84
I P + E ++ + ++ F +S + L L L+ +
Sbjct: 314 PVIKDPTPIEKEKRTEQPLDTVSTITINFTQNSDKTIHEEADKLKELTDMLKANPNQCLQ 373
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
I GH G+R +++ +GLRRA +V + + +G A ++ S G+ P V E
Sbjct: 374 ITGHTCNWGTRKNNLRIGLRRANSVKSKLIKQGAPAKKIFTESKGEAEPLVPNTSEVNRK 433
Query: 145 KNRRAIVFLKGCR 157
KNRR + + C+
Sbjct: 434 KNRRVEIKVVKCK 446
>gi|330830900|ref|YP_004393852.1| sodium-driven polar flagellar protein [Aeromonas veronii B565]
gi|328806036|gb|AEB51235.1| Sodium-driven polar flagellar protein [Aeromonas veronii B565]
Length = 283
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 46/129 (35%), Gaps = 5/129 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
D + +L +Q + + F S ++P V+ + + L+ + I GH D
Sbjct: 139 QDGAIEIEALGQQIIIRIREKASFPAGSAFLQPQFWPVIRKVATLLKDVPGEITISGHTD 198
Query: 91 ELGS----RNSSIALGLRRAYAVF-NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ + S+ L +RA AV G R+ V P V +
Sbjct: 199 NVATEDELFQSNWELSSQRAVAVAHQMLKVPGFDQGRLVVQGMADSQPLVPNTTPENRRM 258
Query: 146 NRRAIVFLK 154
NRR + +
Sbjct: 259 NRRVEIAIM 267
>gi|317129962|ref|YP_004096244.1| OmpA/MotB domain protein [Bacillus cellulosilyticus DSM 2522]
gi|315474910|gb|ADU31513.1| OmpA/MotB domain protein [Bacillus cellulosilyticus DSM 2522]
Length = 258
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 45/125 (36%), Gaps = 5/125 (4%)
Query: 34 VLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG 93
++ S + + V F+++ + L +G+ +E ++EGH D
Sbjct: 123 SISASRDDRGVVLVLQEQVLFESARAELISDATAFLDKVGTLIESVPNPIMVEGHTDSRP 182
Query: 94 S----RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
S+ L RA +V Y V SR YG P + KNRR
Sbjct: 183 IETFQFPSNWELSGARASSVIRYLVDNHDLDQSRFVSVGYGDTRPIAPNTTNENLQKNRR 242
Query: 149 AIVFL 153
++ +
Sbjct: 243 VVIVI 247
>gi|326772136|ref|ZP_08231421.1| OmpA family protein [Actinomyces viscosus C505]
gi|326638269|gb|EGE39170.1| OmpA family protein [Actinomyces viscosus C505]
Length = 529
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 53/138 (38%), Gaps = 3/138 (2%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC- 81
L+ + D + ++ + +V V F T S + VL+ + ++K+
Sbjct: 216 KLERATLAMDGSSDTKQDEKSTTVTVAGDVTFATDSDQLSTQADSVLATVVEQIKKYPSG 275
Query: 82 -DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHD 139
+ I GH D++ + L RRA AV ++ V+ G+ P V
Sbjct: 276 GELTITGHTDDVADDAHNQDLSERRAKAVSERLKKLTDLSAWKESVSGKGESSPRVPNDT 335
Query: 140 EDAYAKNRRAIVFLKGCR 157
++ NRR + L +
Sbjct: 336 DERRQINRRVEITLTPSK 353
>gi|323490130|ref|ZP_08095350.1| flagellar motor protein MotB [Planococcus donghaensis MPA1U2]
gi|323396178|gb|EGA89004.1| flagellar motor protein MotB [Planococcus donghaensis MPA1U2]
Length = 256
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 44/132 (33%), Gaps = 6/132 (4%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEG 87
+ L ++ + + V F++ S +I ++ + + + IEG
Sbjct: 117 NGLAPRLQTDMTRKGLKIIIKEGVLFESGSATILKGSEKITDEISNLLITDPPRMIFIEG 176
Query: 88 HADELGSRNSSIAL-----GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
H D + + + R + N +S + T Y + P +
Sbjct: 177 HTDNVPAGTAEYPTNWELSSARAINFMRNLLENDKLSPQKFSATGYSQYQPIASNDTPEG 236
Query: 143 YAKNRRAIVFLK 154
A+NRR V +
Sbjct: 237 RAENRRVEVLIS 248
>gi|213028311|ref|ZP_03342758.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Typhi str. 404ty]
Length = 111
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 56/108 (51%), Gaps = 1/108 (0%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRA 106
V +V FD+SS +++PA L+ + L+++ + G+ D GS + ++ L +RA
Sbjct: 1 VRTNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVVGYTDSTGSHDLNMRLSQQRA 60
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+V + + +G+ ASR++ + G P + A+NRR + L
Sbjct: 61 DSVASSLITQGVDASRIRTSGMGPANPIASNSTAEGKAQNRRVEITLS 108
>gi|94986930|ref|YP_594863.1| flagellar motor protein [Lawsonia intracellularis PHE/MN1-00]
gi|94731179|emb|CAJ54541.1| Flagellar motor protein [Lawsonia intracellularis PHE/MN1-00]
Length = 206
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 28/113 (24%), Positives = 43/113 (38%), Gaps = 6/113 (5%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELG-----SRNSSIAL 101
+ D V F S + P + LS L + + I+G+ D +++ L
Sbjct: 86 LPDEVLFAPGSEQLTPQGEKALSQLRDLFLKNREQSINIKGYTDNSSVSEGARFHNNWEL 145
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RA V + GI A+RM T G P + A+NRR L+
Sbjct: 146 SALRAVNVLRKLLQGGIEATRMTATGLGDLDPLAPNDTPENRAQNRRVEFTLE 198
>gi|94268092|ref|ZP_01291083.1| OmpA/MotB [delta proteobacterium MLMS-1]
gi|93451732|gb|EAT02500.1| OmpA/MotB [delta proteobacterium MLMS-1]
Length = 240
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 5/122 (4%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHAD----E 91
S QF+ ++ + + F + R + +L L L +I GH+D
Sbjct: 111 VSGNVGQFTLTLEEKLAFASGRAEPREPSLPILERLAELLAGKPAYRVIIAGHSDDLPIS 170
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
S+ L RA AV Y +G+ R+ + + P V AKNRR +
Sbjct: 171 SERYPSNWYLSSARAVAVAEYLQQQGVDPGRLTTQGHAEFKPRVANDSPQNRAKNRRVEI 230
Query: 152 FL 153
L
Sbjct: 231 TL 232
>gi|262377497|ref|ZP_06070719.1| outer membrane protein [Acinetobacter lwoffii SH145]
gi|262307553|gb|EEY88694.1| outer membrane protein [Acinetobacter lwoffii SH145]
Length = 352
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 53/127 (41%), Gaps = 4/127 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADE 91
L E + + VFFDT+ +I+ ++ + +E + IEGH D
Sbjct: 219 VAPAPQELTEDLNMEL--RVFFDTNKSNIKDQYKPEIAKVAEKLVEYPNATARIEGHTDN 276
Query: 92 LGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G R + L L RA +V + V + ASR+ + + P + ++ A NRR
Sbjct: 277 TGPRALNERLSLARANSVKSSLVNEYNVDASRLSTQGFAWDQPIADNNTKEGRAMNRRVF 336
Query: 151 VFLKGCR 157
+ G R
Sbjct: 337 ATITGSR 343
>gi|224825740|ref|ZP_03698844.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002]
gi|224601964|gb|EEG08143.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002]
Length = 271
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 57/148 (38%), Gaps = 4/148 (2%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
+ S++ + + + + + + DS F + P +QVL+ +
Sbjct: 102 LGSLASDLQKVMEPLVKGGQVKITQSPKGVTIEIRDSALFPIAQAQPAPQSLQVLAQMAK 161
Query: 75 WLEKHDCDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
L + D +EG D + S+ L RA +V FV GI+ +R+ +
Sbjct: 162 VLSQVDNPITVEGFTDNIPIRNTFYPSNWELSAARAGSVVRLFVENGIAPARLVAVGRAE 221
Query: 131 EMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
+P E+ A NRR + ++ A
Sbjct: 222 NLPVADNTSEEGRASNRRVSITVRSVTA 249
>gi|94264345|ref|ZP_01288137.1| OmpA/MotB [delta proteobacterium MLMS-1]
gi|93455239|gb|EAT05452.1| OmpA/MotB [delta proteobacterium MLMS-1]
Length = 240
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 5/122 (4%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHAD----E 91
S QF+ ++ + + F + R + +L L L +I GH+D
Sbjct: 111 VSGNVGQFTLTLEEKLAFASGRAEPREPSLPILERLAELLAGKPAYRVVIAGHSDDLPIS 170
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
S+ L RA AV Y +G+ R+ + + P V AKNRR +
Sbjct: 171 SERYPSNWYLSSARAVAVAEYLQQQGVDPGRLTTQGHAEFKPRVANDSPQNRAKNRRVEI 230
Query: 152 FL 153
L
Sbjct: 231 TL 232
>gi|74095554|emb|CAJ27320.1| conserved hypothetical protein [Cronobacter sakazakii]
Length = 444
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
++ Q + F S+RP I ++ + + +++ + + +I GH D
Sbjct: 320 VSVDESQRESRVIFHGDSMFAVGDASVRPERIDIIRRVAAEVQRVNGEVVIIGHTDSTPI 379
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
S+ AL +RA AV YF +GI+ ++ G P HD ++NRR
Sbjct: 380 RSGAFASNQALSEKRAQAVAAYFREQGIAPEKITSKGAGDTQPIASNHDAQGRSQNRRVE 439
Query: 151 VFL 153
+F+
Sbjct: 440 IFV 442
>gi|149927733|ref|ZP_01915985.1| outer membrane protein [Limnobacter sp. MED105]
gi|149823559|gb|EDM82789.1| outer membrane protein [Limnobacter sp. MED105]
Length = 174
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 12/159 (7%)
Query: 6 IFIILSAITMM----------SISGIDNLDTKISSPDTVLNESS-LQEQFSSSVGDSVFF 54
+ +L+A + S +G + P ++ L + SV+F
Sbjct: 14 MVAVLAACSSAVPLNDKPTVESKTGTAPGSDGRAVPTVTPGDADPLNDPQGVLAKRSVYF 73
Query: 55 DTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYF 113
D SY+++ +++ N + + + +++G+ DE G ++ALG RRA AV
Sbjct: 74 DYDSYTVKSEYRELVQNHAKYLVANPNRKVVVQGNTDERGGAEYNLALGQRRADAVKTLM 133
Query: 114 VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+A G+ +++ S+GKE P G +E AYA+NRR+ +
Sbjct: 134 LALGVKEGQIETVSFGKEKPKATGSNEAAYAENRRSDIV 172
>gi|291447367|ref|ZP_06586757.1| secreted protein [Streptomyces roseosporus NRRL 15998]
gi|291350314|gb|EFE77218.1| secreted protein [Streptomyces roseosporus NRRL 15998]
Length = 215
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 42/115 (36%), Gaps = 1/115 (0%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRN 96
++ V F S + A ++ + ++K + + G D LGS
Sbjct: 93 EDSNADIKFALQAEVLFGKDSAKLSSAANARIAAIAEEIKKQNATKIRVFGFTDNLGSSA 152
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
L +RA AV + ++ YG++ P +E+ KNRR V
Sbjct: 153 HGDVLSKQRADAVHGVLSKQLGPTVTYEIRGYGEQYPIASNSNEEGRKKNRRVEV 207
>gi|260778449|ref|ZP_05887341.1| outer membrane protein [Vibrio coralliilyticus ATCC BAA-450]
gi|260604613|gb|EEX30908.1| outer membrane protein [Vibrio coralliilyticus ATCC BAA-450]
Length = 222
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
V E + Q + + + F T SY++ P+ L + +E D +IEGH D
Sbjct: 96 SGVQVERVGENQLMLRMENGIGFQTGSYNLDPSIHNTLRGVAKILVEYPDTSLVIEGHTD 155
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS ++ L RRA +V +Y +++G+++ R G+ P + + A NRR
Sbjct: 156 STGSDTTNQVLSERRAESVRSYLISQGVASGRAIARGNGERFPLCTNNTSEGRACNRRVE 215
Query: 151 VFL 153
+ +
Sbjct: 216 IKI 218
>gi|157692040|ref|YP_001486502.1| flagellar motor protein MotB [Bacillus pumilus SAFR-032]
gi|157680798|gb|ABV61942.1| flagellar motor protein B [Bacillus pumilus SAFR-032]
Length = 254
Score = 75.2 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 41/128 (32%), Gaps = 6/128 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
L E ++ DS+FFD+ IRP D+ + + L + ++ +
Sbjct: 119 GAKLETKLTDEGLLITIEDSIFFDSGRAVIRPQDVPLAKEISKLLVINPARDIVISGHTD 178
Query: 92 LGSRNSSIALGLRRAYAVFNY------FVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+S A+ ++ +G+ P + +K
Sbjct: 179 NVPIRNSDFESNWYLSAIRAVNFLSILLENSNLNQENFSTKGFGEFKPIASNDTAEGRSK 238
Query: 146 NRRAIVFL 153
NRR V +
Sbjct: 239 NRRVEVLI 246
>gi|254460338|ref|ZP_05073754.1| OmpA domain protein [Rhodobacterales bacterium HTCC2083]
gi|206676927|gb|EDZ41414.1| OmpA domain protein [Rhodobacteraceae bacterium HTCC2083]
Length = 594
Score = 74.8 bits (182), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 41/121 (33%), Gaps = 2/121 (1%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD--CDFLIEGHADEL 92
+ + G + F+ S ++ + +L ++ L K I G+ D
Sbjct: 437 TADECEVQVTEIQSGRKITFEPGSGNLDASAESILDDMAEILIKCPDDMRMEISGYTDSQ 496
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
G + L RA AV R + SR YG+E P E NRR
Sbjct: 497 GREVMNQELSQTRAQAVLTALRERRVLMSRYVAKGYGEENPIGDNSTEAGREANRRIEFK 556
Query: 153 L 153
L
Sbjct: 557 L 557
>gi|193215633|ref|YP_001996832.1| OmpA/MotB domain-containing protein [Chloroherpeton thalassium ATCC
35110]
gi|193089110|gb|ACF14385.1| OmpA/MotB domain protein [Chloroherpeton thalassium ATCC 35110]
Length = 398
Score = 74.8 bits (182), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRA 106
V + + FD ++RP I ++ + S ++ H D F +EGH D G +S+ L +RA
Sbjct: 291 VVNGIKFDVGKATLRPESIGPINEIYSLMKAHADIKFSVEGHTDSDGDASSNQTLSEQRA 350
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+V + + GISA R+K +G+ P + A NRR
Sbjct: 351 KSVMDELIRMGISADRLKFKGFGESKPVDTNDTPEGKANNRRVEFV 396
>gi|172062063|ref|YP_001809715.1| hypothetical protein BamMC406_3023 [Burkholderia ambifaria MC40-6]
gi|171994580|gb|ACB65499.1| type IV / VI secretion system protein, DotU family [Burkholderia
ambifaria MC40-6]
Length = 434
Score = 74.8 bits (182), Expect = 3e-12, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 42/123 (34%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+ + F + + P +L+ + S + + + L+ GH D
Sbjct: 310 VTVDEDDRRSVVVFRGDSMFASGKRVVLPEIEPILNKVASEVARVGGNVLVSGHTDNQPI 369
Query: 95 RNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
R+++ A L +RA V G A R++ G P A NRR
Sbjct: 370 RSAAFADNQVLSEKRAEFVAQILQRDGTPAERIRAVGKGDTQPVGDNATAAGRALNRRVE 429
Query: 151 VFL 153
+ +
Sbjct: 430 IMV 432
>gi|86144391|ref|ZP_01062723.1| Outer membrane protein [Vibrio sp. MED222]
gi|85837290|gb|EAQ55402.1| Outer membrane protein [Vibrio sp. MED222]
Length = 353
Score = 74.8 bits (182), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 1/102 (0%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
F+T+S + L L L+ H + GH D G+ ++ + +RA AV
Sbjct: 232 MFETNSTELSSEGKSALMPLVEVLQAHPQSSVNVVGHTDSTGAAEYNMMISKKRAAAVAA 291
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
Y +GI A R+ + G+E P + A+NRR +
Sbjct: 292 YIEEQGIEADRITASGEGEENPVASNATAEGRAQNRRVDATI 333
>gi|127512084|ref|YP_001093281.1| OmpA/MotB domain-containing protein [Shewanella loihica PV-4]
gi|126637379|gb|ABO23022.1| OmpA/MotB domain protein [Shewanella loihica PV-4]
Length = 234
Score = 74.8 bits (182), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 51/141 (36%), Gaps = 1/141 (0%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
++S + + ++ S V+F +S + L+ +
Sbjct: 92 LLSFCEPAAQKAQYGQARQNKQDEQVKRSIGESNVVRVYFAFASAEVSIDQWPQLAKVRD 151
Query: 75 WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMP 133
+L D + GH D +GS +++L +RA V F G+ A R+ + + G P
Sbjct: 152 FLSASDARLTLVGHTDNIGSEAVNLSLSRQRAERVKQIFVQDYGVKAERLSIVAKGASQP 211
Query: 134 SVYGHDEDAYAKNRRAIVFLK 154
A NRR ++
Sbjct: 212 VTDNFGPGERALNRRVEFIVE 232
>gi|284037622|ref|YP_003387552.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
gi|283816915|gb|ADB38753.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
Length = 241
Score = 74.8 bits (182), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADELGSRNSSIALGLRRAYA 108
D+V+FD SSY +RP L+ L L + I GH D +G + + AL RA
Sbjct: 134 DNVYFDQSSYVLRPESYPQLNKLIKTLVTIPKLVIEIAGHTDNVGDKRLNQALSENRAKI 193
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ NY V GI +R++ YG P+ E+ KNRR +
Sbjct: 194 ITNYLVTNGIPENRLRHNGYGSSKPAAPNDTEENKRKNRRVEFVV 238
>gi|226949496|ref|YP_002804587.1| chemotaxis MotB protein [Clostridium botulinum A2 str. Kyoto]
gi|226843238|gb|ACO85904.1| chemotaxis MotB protein [Clostridium botulinum A2 str. Kyoto]
Length = 254
Score = 74.8 bits (182), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RN 96
+ + D V F++ + +L + L+ D + + GH D
Sbjct: 117 ADGLEIDIQDVVLFNSGDAEVLKQSSALLKQISKMLKGLDNNIKVTGHTDNQPISNSKFR 176
Query: 97 SSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA V N+ GISA+++ + +YG+ MP E AKNRR + +
Sbjct: 177 SNWDLSAIRAINVMNFLSNIGGISANKLSIQAYGEYMPKFNNATEAGRAKNRRVEISI 234
>gi|253700958|ref|YP_003022147.1| OmpA/MotB domain protein [Geobacter sp. M21]
gi|251775808|gb|ACT18389.1| OmpA/MotB domain protein [Geobacter sp. M21]
Length = 222
Score = 74.8 bits (182), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/126 (26%), Positives = 55/126 (43%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
E+ ++ + FD + ++PA ++ L+ S L + D +I+GH D
Sbjct: 87 PEAQVERQGEKIYVTLPSGILFDKNKDLLKPAFMESLARAASSLRESQTDIIIQGHTDSS 146
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
GS ++ L RRA V +Y VA+G+ SR+ YG P E NRR +
Sbjct: 147 GSDAINLPLSQRRADRVRDYLVAQGVPTSRLIAIGYGATRPQFPNDSEANRLLNRRVQLE 206
Query: 153 LKGCRA 158
+ A
Sbjct: 207 ISPNSA 212
>gi|308071044|ref|YP_003872649.1| flagellar motor protein [Paenibacillus polymyxa E681]
gi|305860323|gb|ADM72111.1| Flagellar motor protein [Paenibacillus polymyxa E681]
Length = 271
Score = 74.8 bits (182), Expect = 3e-12, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 42/131 (32%), Gaps = 9/131 (6%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ + S ++ D FD +++ LS L S IEGH D
Sbjct: 135 ENQIFVSDQPRGIVITLNDRFLFDQGRAALKQGSANTLSKLASLFRDLKTPISIEGHTDN 194
Query: 92 LG--------SRNSSIALGLRRAYAVFNY-FVARGISASRMKVTSYGKEMPSVYGHDEDA 142
+ + + L RA +V + +S S + Y P E
Sbjct: 195 IPFTRSSNSSTYKDNWELSGARALSVLRFFLDREQLSPSGFQYAGYADTRPVGDNSTEAG 254
Query: 143 YAKNRRAIVFL 153
KNRR + +
Sbjct: 255 RQKNRRVEITV 265
>gi|262369124|ref|ZP_06062453.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
gi|262316802|gb|EEY97840.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
Length = 216
Score = 74.8 bits (182), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 61/146 (41%), Gaps = 1/146 (0%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
++ T + + + + + V + + ++ FDT+ +I+P
Sbjct: 67 VVGGATGVYLDNKEKKLRQQMAGTGVEVNRNPDGSVGLIMPGNITFDTNKSNIKPNFYST 126
Query: 69 LSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
L+ + L + + L+ G+ D G+ + +I L RA +V +Y ++G+S +R+
Sbjct: 127 LNKVAQTLTEDNKSGILVTGYTDSTGNDSINIPLSQARAQSVASYLASQGVSTTRINAQG 186
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFL 153
G P + +NRR + +
Sbjct: 187 QGSANPIASNATAEGREQNRRVEISI 212
>gi|90417117|ref|ZP_01225045.1| outer membrane protein OprL precursor [marine gamma proteobacterium
HTCC2207]
gi|90331133|gb|EAS46389.1| outer membrane protein OprL precursor [marine gamma proteobacterium
HTCC2207]
Length = 177
Score = 74.8 bits (182), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 65/134 (48%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+ D DT + + + + +FD ++P L + L+
Sbjct: 44 TSTDIEDTSVQTGQVDTSAIDDAAVEVMTADTVFYFDFDKALLKPESRAALLEHSASLQN 103
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ +EGHADE G+R ++ALG RRA AV + V +G+S ++V SYG+E + YG
Sbjct: 104 SPRNVRLEGHADERGTREYNMALGERRANAVKEFLVLQGVSPGLIEVISYGEERAAAYGS 163
Query: 139 DEDAYAKNRRAIVF 152
++DA+ NRR +
Sbjct: 164 NDDAWGLNRRVELK 177
>gi|154149070|ref|YP_001406274.1| Omp18 [Campylobacter hominis ATCC BAA-381]
gi|153805079|gb|ABS52086.1| Omp18 [Campylobacter hominis ATCC BAA-381]
Length = 154
Score = 74.8 bits (182), Expect = 3e-12, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 7/156 (4%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M++ + + A M+S + +S D + + S ++V+FD ++
Sbjct: 1 MKHLVLLSAVVAALMVSGCSKKTPEVNSNSADAL----ATLASKIQSEVNTVYFDFDKFN 56
Query: 61 IRPADIQVLSNLGSWLEK---HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG 117
I+ ++ +SN + + IEG+ DE G+ + ALGL+RA A + V +G
Sbjct: 57 IKTSEQSKISNNAALFNQAGAESLTVKIEGNCDEWGTDEYNYALGLKRATAAKDALVKQG 116
Query: 118 ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ +R+ V SYG+ + A+NRR +
Sbjct: 117 VAENRLSVVSYGESNLVCTDKTKACDAQNRRDEFKV 152
>gi|78046418|ref|YP_362593.1| OmpA family outer membrane lipoprotein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78034848|emb|CAJ22493.1| OmpA family outer membrane lipoprotein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 400
Score = 74.8 bits (182), Expect = 3e-12, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 47/118 (39%), Gaps = 7/118 (5%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNSSIAL 101
+ ++ D + FD IRP +VL L + + D + GH D GS + + AL
Sbjct: 283 GYLITLNDRILFDFDKSDIRPDAARVLDTLGAALTKVTAKDMQVRGHTDAKGSDDYNQAL 342
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG-----HDEDAYAKNRRAIVFLK 154
RRA AV + +A YG+ P + NRR +FL+
Sbjct: 343 SERRANAVLAA-LRARGAAQSANAKGYGESQPVAPNTLNGQDNPGGRQLNRRVEIFLR 399
>gi|152975140|ref|YP_001374657.1| flagellar motor protein MotS [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|152023892|gb|ABS21662.1| OmpA/MotB domain protein [Bacillus cytotoxicus NVH 391-98]
Length = 225
Score = 74.8 bits (182), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 5/119 (4%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RN 96
S + D++ FDT +++P +++S L + + ++EGH D
Sbjct: 106 DTGVSIVIVDNLIFDTGDANVKPEAKEIISRLAGFFQSVPNPIVVEGHTDSRPIRNAKFP 165
Query: 97 SSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
S+ L RA + ++ + I +R+ Y P D +AKNRR ++++K
Sbjct: 166 SNWELSSARAANMIHHLIEVYEIDPNRLAAVGYADTKPVAPNDSPDNWAKNRRVVIYVK 224
>gi|163733522|ref|ZP_02140965.1| peptidoglycan-associated lipoprotein, putative [Roseobacter
litoralis Och 149]
gi|161393310|gb|EDQ17636.1| peptidoglycan-associated lipoprotein, putative [Roseobacter
litoralis Och 149]
Length = 173
Score = 74.8 bits (182), Expect = 3e-12, Method: Composition-based stats.
Identities = 47/122 (38%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADE 91
N+ + F+ +VGD V F +I + WL D +IEGHADE
Sbjct: 46 GSANDPTSTAYFNQTVGDRVLFSVDESAINAVGQTTVEGQAQWLLANTDYTAVIEGHADE 105
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
G+R ++ALG RRA AV Y ++RG++ +R++ SYGKE P E+ YAKNRRA+
Sbjct: 106 QGTREYNVALGARRANAVREYLISRGVAGNRLQTVSYGKERPIEICSSEECYAKNRRAVT 165
Query: 152 FL 153
L
Sbjct: 166 VL 167
>gi|326336372|ref|ZP_08202543.1| lipoprotein PG3 [Capnocytophaga sp. oral taxon 338 str. F0234]
gi|325691546|gb|EGD33514.1| lipoprotein PG3 [Capnocytophaga sp. oral taxon 338 str. F0234]
Length = 231
Score = 74.8 bits (182), Expect = 3e-12, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 55/135 (40%), Gaps = 3/135 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDS--VFFDTSSYSIRPADIQVLS-NLGSWLEK 78
D KI + + + + V F+ + ++ +L+ + E
Sbjct: 81 DRQAKKIEEEIPGAEVKRVDDGIVVTFDEKSGVTFEFNKATLTSEAQTILNKMVSVLKEY 140
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
D + ++ GH D G ++ L +RA AV N+F G++ASR +G P+
Sbjct: 141 PDTNVIVAGHTDSTGKAAYNMTLSEKRAKAVTNFFTTNGLNASRFTTKWFGATQPAYDNS 200
Query: 139 DEDAYAKNRRAIVFL 153
+ AKNRR V +
Sbjct: 201 TAEGRAKNRRVNVVI 215
>gi|149916697|ref|ZP_01905199.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
gi|149822414|gb|EDM81803.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
Length = 520
Score = 74.8 bits (182), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 52/139 (37%), Gaps = 2/139 (1%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW- 75
+ D +E + + + V + + F+ +S +IR + + +
Sbjct: 366 ACIDEPEKVNGYKDEDGCPDEVPIAVREFTGVIEGIEFEYNSATIREGKSKEVLDAAIKV 425
Query: 76 -LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
E + + GH D G+ + L RA AV Y GI+ R++ G+ P
Sbjct: 426 LEEYPEIRIKVVGHTDNQGTPEYNKKLSTDRADAVKQYLAEGGIAEDRIETFGAGQSDPL 485
Query: 135 VYGHDEDAYAKNRRAIVFL 153
E+ AKNRR +
Sbjct: 486 TTNETEEGRAKNRRTEFEI 504
>gi|149202036|ref|ZP_01879009.1| OmpA domain protein [Roseovarius sp. TM1035]
gi|149144134|gb|EDM32165.1| OmpA domain protein [Roseovarius sp. TM1035]
Length = 635
Score = 74.8 bits (182), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 44/124 (35%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHA 89
E + + F+ S I ++ ++ L+K + I GH
Sbjct: 476 AGLPTPEECEAQIAGIQAERKINFEPGSAKIDAQGAAIMDDIADVLKKCGEVRMEIGGHT 535
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G + + L L RA AV + R + S + YG+ +P E+ NRR
Sbjct: 536 DSQGGEDMNAQLSLSRARAVLDELRMRRVLTSSIDAKGYGESVPIADNETEEGRETNRRI 595
Query: 150 IVFL 153
L
Sbjct: 596 EFRL 599
>gi|126740601|ref|ZP_01756288.1| OmpA domain protein [Roseobacter sp. SK209-2-6]
gi|126718402|gb|EBA15117.1| OmpA domain protein [Roseobacter sp. SK209-2-6]
Length = 644
Score = 74.8 bits (182), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 42/130 (32%), Gaps = 1/130 (0%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDF 83
L + + V + F+ S ++ L LE
Sbjct: 471 PPAPKDQPMSLEVCAEKLTSLQDVTGKIHFEPGSATVAAGSSATLDKAAEVLELCGPIRL 530
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
I+GH D G + +L RA ++ N AR I S + YG+ P E+
Sbjct: 531 EIQGHTDSQGREGMNQSLSQARAQSILNELRARRIRTSTILAKGYGESTPIATNDSEEGR 590
Query: 144 AKNRRAIVFL 153
NRR +
Sbjct: 591 EANRRIEFKV 600
>gi|110638196|ref|YP_678405.1| outer membrane protein 3a [Cytophaga hutchinsonii ATCC 33406]
gi|110280877|gb|ABG59063.1| outer membrane protein 3a [Cytophaga hutchinsonii ATCC 33406]
Length = 903
Score = 74.8 bits (182), Expect = 3e-12, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
++++FD + +RP + L L ++ + + + D LG+ + AL +R A
Sbjct: 560 ENIYFDFNQSDLRPEAKKTLDELAAYSNKNPQIQIELNANTDGLGTDTYNRALSEKRGQA 619
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+Y + +G+ SR+ + GKE P +E NRR ++ G
Sbjct: 620 AIDYLIGKGVDHSRIVMNPLGKERPLTSNDNEVGRQLNRRVEFYILG 666
>gi|293369806|ref|ZP_06616382.1| OmpA family protein [Bacteroides ovatus SD CMC 3f]
gi|292635228|gb|EFF53744.1| OmpA family protein [Bacteroides ovatus SD CMC 3f]
Length = 297
Score = 74.8 bits (182), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 6/114 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHAD----ELGSRNSSIA 100
S+ D++ + + SY I VLS + ++ + D D L+EG+ D + ++
Sbjct: 154 ISLADNMLYKSGSYEISNKAEAVLSKIAKIIQDYKDYDVLVEGNTDTDPISRTNIRNNWD 213
Query: 101 LGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V GI+ R+ G+ P + A+NRR + +
Sbjct: 214 LSALRASSVVQALQNVYGINPKRLTAAGRGEFNPVAGNDTAEGKARNRRTEIII 267
>gi|163803132|ref|ZP_02197015.1| putative outer membrane protein OmpA [Vibrio sp. AND4]
gi|159173032|gb|EDP57865.1| putative outer membrane protein OmpA [Vibrio sp. AND4]
Length = 320
Score = 74.8 bits (182), Expect = 3e-12, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 50/137 (36%), Gaps = 1/137 (0%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF 83
+ + +++ +Q + +V F S ++ +
Sbjct: 180 SEPVVQEVVETRPATNIVDQEYPAQTTTVQFGLESAKLQ-DASAFNGTVELMNTYPQAQV 238
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
I G++D G+ + L +RA AV +F A GI+A RM V G+ P
Sbjct: 239 EINGYSDTTGAAAYNQQLTEKRAQAVAEHFQAEGIAADRMTVKGMGEANPVASNETRKGR 298
Query: 144 AKNRRAIVFLKGCRANT 160
+NRR V + + T
Sbjct: 299 EQNRRVEVVVPAFQYQT 315
>gi|121997146|ref|YP_001001933.1| OmpA/MotB domain-containing protein [Halorhodospira halophila SL1]
gi|121588551|gb|ABM61131.1| OmpA/MotB domain protein [Halorhodospira halophila SL1]
Length = 246
Score = 74.8 bits (182), Expect = 3e-12, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 42/117 (35%), Gaps = 4/117 (3%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RN 96
++ + F S I + VL + L + GH D++
Sbjct: 125 EDGVLLRFPEQAAFALGSKEISEPFVPVLDRVAGVLADTPGLIRVSGHTDDIPIRSDRFR 184
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA +V + GI+ R+ +G+ P + A+NRR V L
Sbjct: 185 SNFELSTARAISVVHILKDAGITPERLIAQGHGETRPLAPNETPEQRARNRRVDVHL 241
>gi|312890939|ref|ZP_07750468.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
gi|311296722|gb|EFQ73862.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
Length = 252
Score = 74.8 bits (182), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 52/133 (39%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL-GSWLEKHD 80
D +I + E + FD +++P + L S + +
Sbjct: 104 DKQAAEIKNTVPGAQVVREGEGIIVKFDSGILFDIDKTALKPVAKTNIDQLSASLKKNPE 163
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ LI GH D G+ ++ L +RRA AV Y +A G+ ASR+ G P
Sbjct: 164 TNILIVGHTDNTGTAAHNMDLSVRRAEAVKAYAIAAGVDASRLTTQGKGDTEPIADNTTV 223
Query: 141 DAYAKNRRAIVFL 153
D +NRR + +
Sbjct: 224 DGRTQNRRVEIVI 236
>gi|84625147|ref|YP_452519.1| outer membrane protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|188578417|ref|YP_001915346.1| OmpA family outer membrane protein [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|84369087|dbj|BAE70245.1| outer membrane protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|188522869|gb|ACD60814.1| OmpA family outer membrane protein [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 365
Score = 74.8 bits (182), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 55/139 (39%), Gaps = 8/139 (5%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDF 83
D +S S V FD + ++RP I +LS L+++
Sbjct: 227 DKCPNSQPGQTIGPDGCPVPVSIDLKGVNFDFNKSTLRPDAISILSEATEILKRYPDLKV 286
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYG----- 137
+ GH D G+ + L RRA V++Y G+ ASR+ YGK P
Sbjct: 287 EVAGHTDSKGTDAYNQKLSERRATTVYDYLTKNGVDASRLVGPIGYGKSRPIAPNTNPDG 346
Query: 138 -HDEDAYAKNRRAIVFLKG 155
+ + AKNRR + ++
Sbjct: 347 SDNPEGRAKNRRTELNVQN 365
>gi|86134861|ref|ZP_01053443.1| OmpA family protein [Polaribacter sp. MED152]
gi|85821724|gb|EAQ42871.1| OmpA family protein [Polaribacter sp. MED152]
Length = 234
Score = 74.8 bits (182), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 3/135 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDS--VFFDTSSYSIRPADIQVLSNLGSWL-EK 78
D KI + + + + ++ V+FDT+ +I Q L L E
Sbjct: 84 DEQAKKIETEVPGAKVERVDDGIVVTFDENSGVYFDTNKSNINTKSQQTLDRLAKVFLEF 143
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
D L+ GH D G+ + ++ L +RA +V NY ++ GI++ R + YG+ P
Sbjct: 144 PDTKILVVGHTDNTGNADYNLTLSEKRAKSVTNYLISDGIASPRFQTLWYGEAQPKYDNS 203
Query: 139 DEDAYAKNRRAIVFL 153
+ AKNRR V +
Sbjct: 204 TAEGRAKNRRVNVAI 218
>gi|303256189|ref|ZP_07342205.1| peptidoglycan-associated outer-membrane lipoprotein
[Burkholderiales bacterium 1_1_47]
gi|331001245|ref|ZP_08324871.1| peptidoglycan-associated lipoprotein [Parasutterella
excrementihominis YIT 11859]
gi|302860918|gb|EFL83993.1| peptidoglycan-associated outer-membrane lipoprotein
[Burkholderiales bacterium 1_1_47]
gi|329568972|gb|EGG50768.1| peptidoglycan-associated lipoprotein [Parasutterella
excrementihominis YIT 11859]
Length = 163
Score = 74.8 bits (182), Expect = 3e-12, Method: Composition-based stats.
Identities = 47/136 (34%), Positives = 70/136 (51%), Gaps = 2/136 (1%)
Query: 18 ISGID-NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
S +D + D S D E +L + V FD SY++ P + V++N +L
Sbjct: 22 CSTVDLDKDKAGSITDGTSVEEALSSKTGPLANREVHFDFDSYTVSPDQMPVVTNHAQFL 81
Query: 77 EKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
H + + +EG+ DE G R ++ALG +RA AV G+S +++ SYGKE P
Sbjct: 82 AAHKNLNVRLEGNTDERGGREYNLALGQKRAEAVKERMTLLGVSPQQIETISYGKEKPKA 141
Query: 136 YGHDEDAYAKNRRAIV 151
GHDE AY +NRR +
Sbjct: 142 EGHDEAAYYENRRVDI 157
>gi|110597916|ref|ZP_01386198.1| OmpA/MotB:Rickettsia 17 kDa surface antigen [Chlorobium
ferrooxidans DSM 13031]
gi|110340493|gb|EAT58979.1| OmpA/MotB:Rickettsia 17 kDa surface antigen [Chlorobium
ferrooxidans DSM 13031]
Length = 229
Score = 74.8 bits (182), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 51/133 (38%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHD 80
D +I + + E ++ + F + S ++ + L + +D
Sbjct: 80 DKQAAEIRNEVNGVQVEREGEGIRVTMDSGILFTSGSSTLTSTSRANIEKLARIFNRYND 139
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+IEGH D GS S+ L RRA +V A G+S R+ YG+ P E
Sbjct: 140 TKVVIEGHTDNTGSAASNQLLSERRAESVAKLLSAYGVSDRRLSPVGYGQSRPVASNDTE 199
Query: 141 DAYAKNRRAIVFL 153
NRR V +
Sbjct: 200 YGRQNNRRVEVLI 212
>gi|91792753|ref|YP_562404.1| OmpA/MotB [Shewanella denitrificans OS217]
gi|91714755|gb|ABE54681.1| OmpA/MotB [Shewanella denitrificans OS217]
Length = 178
Score = 74.8 bits (182), Expect = 3e-12, Method: Composition-based stats.
Identities = 45/177 (25%), Positives = 82/177 (46%), Gaps = 25/177 (14%)
Query: 1 MQYSTIF-IILSAITMMSISGIDNLDTKISSPDTVLNESSLQ------------------ 41
M + +F +L A+ M+++ + + + +N S +
Sbjct: 1 MDLNKLFKAMLVAVPMLALGACSSTSDSDTDANGSMNGSGSEYGIDGVQTGGAGAVLSPA 60
Query: 42 -----EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
++ + ++FD ++ + +L+ G++ +E LIEGHADE G+
Sbjct: 61 EQQRLKEQELRRQNIIYFDFDRSDLQSDNADILNAHGNYLVENPSVRVLIEGHADERGTP 120
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+IALG RRA A+ Y G+ AS+M + SYG+E P + D+ +AKNRR ++
Sbjct: 121 EYNIALGERRAKAIAKYLQGMGVQASQMSIVSYGEEKPLDFSRDDSGFAKNRRGVLV 177
>gi|308273523|emb|CBX30125.1| hypothetical protein N47_D29340 [uncultured Desulfobacterium sp.]
Length = 212
Score = 74.8 bits (182), Expect = 3e-12, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 44/113 (38%), Gaps = 5/113 (4%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLR 104
++G+ F T+ + ++P +L +G+++ + + LI GH D ++
Sbjct: 71 VLTMGEKALFYTNRHLLKPESFALLKKVGNFINQGNYKVLIVGHTDNRDAQEKGYNSNWE 130
Query: 105 RAYAVFNYFVARGI-----SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ + I R+ YG + P+ ++ KNRR +
Sbjct: 131 ISSLMAVQLQKYFIEECKIKPDRITAYGYGSQQPAASNDTPESRQKNRRIEII 183
>gi|308049357|ref|YP_003912923.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
gi|307631547|gb|ADN75849.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
Length = 354
Score = 74.8 bits (182), Expect = 3e-12, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
++ + F S + + + L D I+G AD G +++L RRA
Sbjct: 242 ALHRELHFGFDSSELT-DLSPLSDIIERLLRYPDAQVFIQGFADSTGRSQYNLSLSHRRA 300
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
AV +Y ++G+ R+++ +G+ +P + + A+NRR +++ G
Sbjct: 301 QAVADYLQSQGVEPDRIRIEDFGERLPVIDNATAEHRAQNRRVHLYIPG 349
>gi|283786451|ref|YP_003366316.1| T6SS protein Cts1O [Citrobacter rodentium ICC168]
gi|282949905|emb|CBG89530.1| T6SS protein Cts1O [Citrobacter rodentium ICC168]
Length = 594
Score = 74.8 bits (182), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 51/130 (39%), Gaps = 3/130 (2%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSV-FFDTSSYSIRPADIQVLSNLGSWLEKHDCD-F 83
+I + + + + D+V F S ++ P + L + + + F
Sbjct: 461 EQIRQFSPLRKNVAADDASLFPLADTVPLFANGSSNLMPDSEKTLLTIVPVIRRSPEKTF 520
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDA 142
LI GH+D GS +++AL RA + + VA + + G P ++
Sbjct: 521 LIIGHSDSTGSAATNMALSAARAQVIKEWLVAHTGLPAGQFITEGAGDTRPIANNDTKEG 580
Query: 143 YAKNRRAIVF 152
A+NRR +
Sbjct: 581 RAQNRRVEII 590
>gi|309780841|ref|ZP_07675582.1| peptidoglycan-associated outer-membrane lipoprotein [Ralstonia sp.
5_7_47FAA]
gi|308920523|gb|EFP66179.1| peptidoglycan-associated outer-membrane lipoprotein [Ralstonia sp.
5_7_47FAA]
Length = 167
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 45/129 (34%), Positives = 70/129 (54%), Gaps = 2/129 (1%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDF 83
D + +P V + + S S++FD SYS++P +L +L+ H
Sbjct: 39 DARTVTPVDVGRDELT-DPNSPLAKRSIYFDFDSYSVKPEYQGLLGQHSRYLQSHNQRKV 97
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
LI+G+ DE G+ ++ALG +RA AV + G+ S+M+ S GKE P GHDED++
Sbjct: 98 LIQGNTDERGTSEYNLALGQKRAEAVRRALSSMGVPDSQMEAVSLGKEKPQATGHDEDSW 157
Query: 144 AKNRRAIVF 152
A+NRRA +
Sbjct: 158 AQNRRADIV 166
>gi|307727734|ref|YP_003910947.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003]
gi|307588259|gb|ADN61656.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003]
Length = 321
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAY 107
++ F+T S ++ +L + + ++K I GH D G+R S+IAL RA
Sbjct: 214 NRTIEFETGSATLTAQGRAILDQMAAAMQKMTTRTVAIIGHTDNSGNRTSNIALSQARAD 273
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
AV Y VA+GI +M T G + P D A+NRR
Sbjct: 274 AVKGYLVAKGIPPQQMTTTGVGPDQPIATNDTADGRARNRRIEF 317
>gi|167589725|ref|ZP_02382113.1| OmpA/MotB domain protein [Burkholderia ubonensis Bu]
Length = 241
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 42/131 (32%), Gaps = 1/131 (0%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCD 82
S + S Q + + FD S + + L + +
Sbjct: 108 QPAVQPSVPAAESRSESAPQRHILLQGNANFDVDSAKLTLDARRQLDQFLNTNKGVGFQR 167
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
I G+ D GS + L RA +V Y G+ A++ G P D
Sbjct: 168 VTITGYTDSTGSLAHNRRLSESRARSVATYLRTGGLQAAQFVSEGMGPSDPVASNATADG 227
Query: 143 YAKNRRAIVFL 153
A+NRR + +
Sbjct: 228 RAQNRRVEIQV 238
>gi|260174718|ref|ZP_05761130.1| OmpA/MotB domain protein [Bacteroides sp. D2]
gi|315922978|ref|ZP_07919218.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313696853|gb|EFS33688.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 297
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 6/114 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHAD----ELGSRNSSIA 100
S+ D++ + + SY I VLS + ++ + D D L+EG+ D + ++
Sbjct: 154 ISLADNMLYKSGSYEISNKAEAVLSKIAKIIQDYKDYDVLVEGNTDTDPISRTNIRNNWD 213
Query: 101 LGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V GI+ R+ G+ P + A+NRR + +
Sbjct: 214 LSALRASSVVQALQNIYGINPKRLTAAGRGEFNPVAGNDTAEGKARNRRTEIII 267
>gi|163781627|ref|ZP_02176627.1| flagellar motor protein MotB [Hydrogenivirga sp. 128-5-R1-1]
gi|159882847|gb|EDP76351.1| flagellar motor protein MotB [Hydrogenivirga sp. 128-5-R1-1]
Length = 235
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 38/115 (33%), Gaps = 4/115 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
V + + S P ++ N+ S L+ EG+ D + S+
Sbjct: 118 MKLRVNTNRLYPLGSEEPYPQAKELFLNMCSRLKPFSLPITFEGYTDNMPISNPRFPSNW 177
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L RA +V F+ G + YG+ P +NRR +K
Sbjct: 178 ELSAMRAVSVLRLFITCGYPQELLSAVGYGEHHPIAPNDTPANRERNRRIEFCIK 232
>gi|299069126|emb|CBJ40378.1| putative outer membrane protein; OmpA/MotB domain [Ralstonia
solanacearum CMR15]
Length = 279
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 3/120 (2%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADE 91
++E SL +Q + + F+T S ++ P +L + + + I GH D
Sbjct: 158 AAVSEQSLLDQTLA--NRIIEFETGSATLTPKGRGILDEMAAVLPRLNGRKIEIVGHTDN 215
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
GSR ++ L RA V +Y +++G + G + P ++ ++NRR
Sbjct: 216 SGSRAMNLNLSQARAETVKSYLISKGAEPGTLTAIGVGPDQPVAPNATDEGRSRNRRIEF 275
>gi|158522006|ref|YP_001529876.1| OmpA/MotB domain-containing protein [Desulfococcus oleovorans Hxd3]
gi|158510832|gb|ABW67799.1| OmpA/MotB domain protein [Desulfococcus oleovorans Hxd3]
Length = 388
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 3/135 (2%)
Query: 20 GIDNLDTKISSPDTVLNES--SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
D+ D + D + V + + F+ + I L + + L+
Sbjct: 250 ADDDRDGVPNDQDQCPGTPIGAKVNARGCWVIEGLNFERARADIMADSFAKLDEVVTVLK 309
Query: 78 KHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ ++GH D G+ + L +RA AV YFV+RGI+A R+ +G P
Sbjct: 310 NNPELRLEVQGHTDSRGNPGFNQVLSEQRAGAVVRYFVSRGIAADRLVSKGFGPSQPIAD 369
Query: 137 GHDEDAYAKNRRAIV 151
+ A+NRR +
Sbjct: 370 NDTAEGRAENRRVEL 384
>gi|160884511|ref|ZP_02065514.1| hypothetical protein BACOVA_02495 [Bacteroides ovatus ATCC 8483]
gi|298481223|ref|ZP_06999417.1| OmpA family protein [Bacteroides sp. D22]
gi|156110250|gb|EDO11995.1| hypothetical protein BACOVA_02495 [Bacteroides ovatus ATCC 8483]
gi|298272797|gb|EFI14364.1| OmpA family protein [Bacteroides sp. D22]
Length = 297
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 6/114 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHAD----ELGSRNSSIA 100
S+ D++ + + SY I VLS + ++ + D D L+EG+ D + ++
Sbjct: 154 ISLADNMLYKSGSYEISNKAEAVLSKIAKIIQDYKDYDVLVEGNTDTDPISRTNIRNNWD 213
Query: 101 LGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V GI+ R+ G+ P + A+NRR + +
Sbjct: 214 LSALRASSVVQALQNIYGINPKRLTAAGRGEFNPVAGNDTAEGKARNRRTEIII 267
>gi|153835168|ref|ZP_01987835.1| outer membrane protein [Vibrio harveyi HY01]
gi|148868362|gb|EDL67484.1| outer membrane protein [Vibrio harveyi HY01]
Length = 330
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 51/133 (38%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQ-VLSNLGSWLEKHD 80
+ V ++ E + ++F S + Q +L +
Sbjct: 190 SAESHQDIVEPKVEVAATKVELKHEGLTQVIYFGFDSTKVSQESEQKLLEIQKLLVSYPQ 249
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
I G D+ G+ + L RRA ++ Y ++G+ A ++ +TS G+ P H E
Sbjct: 250 SQVEIVGFTDDRGASQYNEKLAKRRAQSIAKYLESKGVKADQISLTSKGELDPVASNHSE 309
Query: 141 DAYAKNRRAIVFL 153
D KNRR V +
Sbjct: 310 DGRVKNRRVEVSI 322
>gi|113474200|ref|YP_720261.1| OmpA/MotB [Trichodesmium erythraeum IMS101]
gi|110165248|gb|ABG49788.1| OmpA/MotB [Trichodesmium erythraeum IMS101]
Length = 246
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 42/122 (34%), Gaps = 1/122 (0%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADE 91
+ L + ++ + F++ S IR ++ NL D + G+ D
Sbjct: 120 NQYSSPVLTKADMVTLPSDILFESGSNKIRFDGRVIVDNLIRELRNYQDVIISVSGYTDN 179
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
G ++ +A + Y + R+ YG+ P + +NRR V
Sbjct: 180 RGKAKVNLEKSFLQAEVIAEYLSKKLGQGYRLLAIGYGESRPIAENDSQTNRQRNRRIEV 239
Query: 152 FL 153
+
Sbjct: 240 KV 241
>gi|332669308|ref|YP_004452316.1| OmpA/MotB domain-containing protein [Cellulomonas fimi ATCC 484]
gi|332338346|gb|AEE44929.1| OmpA/MotB domain protein [Cellulomonas fimi ATCC 484]
Length = 377
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 49/128 (38%), Gaps = 7/128 (5%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
P + + + +V FD S+++R L + L +EGH D
Sbjct: 250 PSMGVLAPAPTCGTRIVLDAAVLFDFGSHAVRADARATLDAVAQVLADVPAA-RVEGHTD 308
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG-----HDEDAYAK 145
+ S + AL RRA AV RG+SA+ ++ +G+ P +
Sbjct: 309 SVSSDELNQALSERRADAVATALGERGVSAA-LETQGFGESRPVAPNEVDGVDNPAGRQL 367
Query: 146 NRRAIVFL 153
NRR + +
Sbjct: 368 NRRVEIVV 375
>gi|308448669|ref|XP_003087717.1| hypothetical protein CRE_26028 [Caenorhabditis remanei]
gi|308253504|gb|EFO97456.1| hypothetical protein CRE_26028 [Caenorhabditis remanei]
Length = 189
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+ ++ + + V FD S + D Q L + + + + GH D
Sbjct: 59 NGASSKGVTEANKAFLAKRVVHFDYDSSDLSNDDYQTLQAHAQFLIANANSKVALTGHTD 118
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
E G+R ++ALG RRA AV +Y + G+ A++++ SYGKEMP GHDE A+ +NRR
Sbjct: 119 ERGTREYNMALGERRAKAVESYLITNGVKANQLEAVSYGKEMPINTGHDEAAWKENRRVE 178
Query: 151 V 151
+
Sbjct: 179 I 179
>gi|299145942|ref|ZP_07039010.1| OmpA family protein [Bacteroides sp. 3_1_23]
gi|298516433|gb|EFI40314.1| OmpA family protein [Bacteroides sp. 3_1_23]
Length = 297
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 6/114 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHAD----ELGSRNSSIA 100
S+ D++ + + SY I VLS + ++ + D D L+EG+ D + ++
Sbjct: 154 ISLADNMLYKSGSYEISNKAEAVLSKIAKIIQDYKDYDVLVEGNTDTDPISRTNIRNNWD 213
Query: 101 LGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V GI+ R+ G+ P + A+NRR + +
Sbjct: 214 LSALRASSVVQALQNVYGINPKRLTAAGRGEFNPVAGNDTAEGKARNRRTEIII 267
>gi|302553861|ref|ZP_07306203.1| type VI secretion system OmpA/MotB [Streptomyces viridochromogenes
DSM 40736]
gi|302471479|gb|EFL34572.1| type VI secretion system OmpA/MotB [Streptomyces viridochromogenes
DSM 40736]
Length = 213
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 47/140 (33%), Gaps = 2/140 (1%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
++ + + ++ T + ++ V F S + ++++
Sbjct: 67 ATLADAKVLDIKTVVEDESGDERREDTNSDVKFALQAEVLFGKDSAKLGAQAKARIADIA 126
Query: 74 SWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFV-ARGISASRMKVTSYGKE 131
++ + + G D LGS AL RRA AV S + YG++
Sbjct: 127 EEIKAQNAKKIRVFGFTDNLGSSAHGDALSRRRASAVQGVLEGELADSGITYETRGYGEQ 186
Query: 132 MPSVYGHDEDAYAKNRRAIV 151
P E KNRR V
Sbjct: 187 YPIADNSTEAGRKKNRRVEV 206
>gi|244538668|dbj|BAH82822.1| fibronectin-binding protein [Campylobacter lari]
Length = 328
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLRRAYAVFN 111
F +I P Q + +G LE++ + I EGH D G + + L L RA AV
Sbjct: 223 HFGFDQITINPEFAQKIQEVGKVLEENPQYYTILEGHTDNTGPKAYNQKLSLERAKAVAK 282
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G++ ++ YG E P ++ A+NRR
Sbjct: 283 ELEKAGVAKEKITTKGYGFEKPIASNDTKEGRAQNRRVE 321
>gi|169632496|ref|YP_001706232.1| putative Outer membrane protein precursor (OmpA-like)
[Acinetobacter baumannii SDF]
gi|169151288|emb|CAO99984.1| putative Outer membrane protein precursor (OmpA-like)
[Acinetobacter baumannii]
Length = 357
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 2/109 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
VFFDT+ +I+ ++ + E + IEGH D G R + L L RA +V
Sbjct: 232 RVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNTGPRKLNERLSLARANSV 291
Query: 110 FNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
+ V + ASR+ + + P ++ A NRR + G R
Sbjct: 292 KSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAMNRRVFATITGSR 340
>gi|222823421|ref|YP_002574995.1| outer membrane fibronectin-binding protein [Campylobacter lari
RM2100]
gi|222538643|gb|ACM63744.1| outer membrane fibronectin-binding protein [Campylobacter lari
RM2100]
gi|244538678|dbj|BAH82830.1| fibronectin-binding protein [Campylobacter lari]
gi|244538683|dbj|BAH82834.1| fibronectin-binding protein [Campylobacter lari]
Length = 328
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLRRAYAVFN 111
F +I P Q + +G LE++ + I EGH D G + + L L RA AV
Sbjct: 223 HFGFDQITINPEFAQKIQEVGKVLEENPQYYTILEGHTDNTGPKAYNQKLSLERAKAVAK 282
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G++ ++ YG E P ++ A+NRR
Sbjct: 283 ELEKAGVAKEKITTKGYGFEKPIASNDTKEGRAQNRRVE 321
>gi|217032687|ref|ZP_03438173.1| hypothetical protein HPB128_202g21 [Helicobacter pylori B128]
gi|216945617|gb|EEC24268.1| hypothetical protein HPB128_202g21 [Helicobacter pylori B128]
Length = 157
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 2/155 (1%)
Query: 1 MQYSTIFIILSA--ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSS 58
M T+ +SA + ++ + + + S ++ S++FD
Sbjct: 1 MDNKTVAGDVSAKTVQTAPVTTEPAPEKEEPKQEPAPVVEEKPAIESGTIIASIYFDFDK 60
Query: 59 YSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI 118
Y I+ +D + L + +++ L+EG+ DE GS + ALG++R +V N V +G+
Sbjct: 61 YEIKESDQETLDEIVQKAKENHMQVLLEGNTDEFGSSEYNQALGVKRTLSVKNALVIKGV 120
Query: 119 SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+K S+G+ P + Y +NRR V L
Sbjct: 121 EKDMIKTISFGETKPKCAQKTRECYKENRRVDVKL 155
>gi|119357024|ref|YP_911668.1| OmpA/MotB domain-containing protein [Chlorobium phaeobacteroides
DSM 266]
gi|119354373|gb|ABL65244.1| OmpA/MotB domain protein [Chlorobium phaeobacteroides DSM 266]
Length = 369
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVF 110
+ FDT + +++P V++ + + + IEGH D G +++ L +R+ AV
Sbjct: 266 IKFDTGNATLKPESNGVINEIVKMMNTYPVIRLRIEGHTDSDGDTSANQILSEKRSAAVK 325
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ RGI+A R+ ++S+G+ P + A NRR
Sbjct: 326 AALIKRGIAAVRLSISSFGETKPVADNTTSEGKANNRRVEFV 367
>gi|330448104|ref|ZP_08311752.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328492295|dbj|GAA06249.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 352
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 41/111 (36%), Gaps = 2/111 (1%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALG 102
+ ++ F S + D L + + + + ++ GH D GS + L
Sbjct: 228 QVEPISVTMPFAFDSDKLTAEDEARLEPIAQRLVNFPNAELVVIGHTDSRGSEAYNQKLS 287
Query: 103 LRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
RA V Y + ASR+K G+ P + A+NRR V
Sbjct: 288 EERAKTVALYLMKHFNIDASRVKGEGRGELDPVASNDTAEGRAQNRRVDVT 338
>gi|258624381|ref|ZP_05719329.1| flagellar motor protein [Vibrio mimicus VM603]
gi|258583343|gb|EEW08144.1| flagellar motor protein [Vibrio mimicus VM603]
Length = 319
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 43/127 (33%), Gaps = 5/127 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ +L +Q + + F S ++P ++ + ++ + GH D
Sbjct: 173 QGAIEVENLGQQIDIRIREKGAFPEGSAFLQPKFRPLVRQIADLVKDIPGKVRVTGHTDN 232
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S+ L +RA +V +G R++V P E A N
Sbjct: 233 QKLDSELYRSNWDLSAQRAVSVAQEMEKVKGFDHQRLQVRGMADTQPLGPNDTEAQRALN 292
Query: 147 RRAIVFL 153
RR + +
Sbjct: 293 RRVEISI 299
>gi|242278716|ref|YP_002990845.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
gi|242121610|gb|ACS79306.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
Length = 400
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 48/135 (35%), Gaps = 4/135 (2%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS---WLEKH 79
+P ++ + S+ +V FD S I+P +L+ LG
Sbjct: 264 ATPKAAPAPVQSTTQAPKAQSKPRSINLAVQFDVDSSQIKPESYSLLNELGKALISDRLK 323
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVYGH 138
D +I GH D S + L RA +V Y R+ T +G+ P V
Sbjct: 324 DKRIVIGGHTDSDASPEYNFKLSKERAESVKKYLTDNFPIAPQRIGTTGFGESNPLVPNT 383
Query: 139 DEDAYAKNRRAIVFL 153
+ NRR V +
Sbjct: 384 TKYNKLLNRRVQVSI 398
>gi|254482387|ref|ZP_05095627.1| type I secretion outer membrane protein, TolC family, putative
[marine gamma proteobacterium HTCC2148]
gi|214037392|gb|EEB78059.1| type I secretion outer membrane protein, TolC family, putative
[marine gamma proteobacterium HTCC2148]
Length = 631
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 2/114 (1%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSI 99
+ S+ V FD +S I A ++ L ++ +EGH D G + +
Sbjct: 513 VDGDMVSLEVDVQFDFNSSVISSAYDSEIARSAGVLRENPGVRATVEGHTDSSGENDYNQ 572
Query: 100 ALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
L RRA AV + + IS ++ G++ P + A+NRR +
Sbjct: 573 WLSERRANAVRDMLINEHGISPEQLVAIGRGEDYPIAGNDTAEDRARNRRVELV 626
>gi|293194235|ref|ZP_06609957.1| outer membrane lipoprotein, OmpA family [Actinomyces odontolyticus
F0309]
gi|292819754|gb|EFF78767.1| outer membrane lipoprotein, OmpA family [Actinomyces odontolyticus
F0309]
Length = 235
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 42/118 (35%), Gaps = 8/118 (6%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIAL 101
++ D V FD IR LS L + L I GH D + ++ L
Sbjct: 116 GTVITLEDGVLFDFGKSDIRSDAAHTLSKLATVLNDAKVPAAHIYGHTDSISDEAFNLQL 175
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG------HDEDAYAKNRRAIVFL 153
RA AV + ++ + T YG+ P + A NRR +F+
Sbjct: 176 SQERADAVSAEL-KKDGVSAILDATGYGESKPVAPNENADGSDNPAGRALNRRVEIFI 232
>gi|168186129|ref|ZP_02620764.1| chemotaxis MotB protein [Clostridium botulinum C str. Eklund]
gi|169295847|gb|EDS77980.1| chemotaxis MotB protein [Clostridium botulinum C str. Eklund]
Length = 242
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 52/127 (40%), Gaps = 5/127 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
D + + +++ FD+ I+ + ++L + ++ +IEGH D
Sbjct: 108 DGTVQVKKDARGVILELKENILFDSGQADIKSSSKEILDKISELIKSVPNGVVIEGHTDN 167
Query: 92 LGSRNS----SIALGLRRAYAVFNYFV-ARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ NS + L +RA V YFV +G +++ YG+ P AKN
Sbjct: 168 VPIHNSKYDSNWELSTQRAVNVLKYFVVNKGEKPEKLQAAGYGEYHPIAKNDTYADRAKN 227
Query: 147 RRAIVFL 153
RR + +
Sbjct: 228 RRVNILI 234
>gi|297583574|ref|YP_003699354.1| OmpA/MotB domain-containing protein [Bacillus selenitireducens
MLS10]
gi|297142031|gb|ADH98788.1| OmpA/MotB domain protein [Bacillus selenitireducens MLS10]
Length = 256
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 43/126 (34%), Gaps = 5/126 (3%)
Query: 34 VLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG 93
++ + + + F+T+ I P L +G+ + +EGH D
Sbjct: 121 NISATRDDRGVVLVLQEQALFETARAEILPQAEPFLEKVGTLVTTVPNMVKVEGHTDSRP 180
Query: 94 S----RNSSIALGLRRAYAVFNY-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
S+ L RA +V + + R YG+ P D +NRR
Sbjct: 181 INTVQFPSNWELSGARASSVIRFILSNFDVDERRFLAVGYGETRPVAPNTTPDNLQQNRR 240
Query: 149 AIVFLK 154
++ +
Sbjct: 241 VVIVIS 246
>gi|159043661|ref|YP_001532455.1| peptidoglycan-associated lipoprotein [Dinoroseobacter shibae DFL
12]
gi|157911421|gb|ABV92854.1| peptidoglycan-associated lipoprotein [Dinoroseobacter shibae DFL
12]
Length = 175
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 13/163 (7%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLN------------ESSLQEQFSSSVGDSVFFDTS 57
L+ I +++SG + + F ++GD V F
Sbjct: 13 LALIVALALSGCAGSGGLFGGGAGGGTAGSGALSSGDFGDPTSPAYFQQAIGDRVLFAVD 72
Query: 58 SYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
++ QV+S W ++ +IEGHADE G++ ++ALG RRA AV ++ V++
Sbjct: 73 QSTLSGEAQQVVSQQARWLMDNGAYTAVIEGHADEQGTQEYNLALGARRASAVRDFMVSQ 132
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
G++ +R+ ++GKE P +E YA+NRRA+ L +
Sbjct: 133 GVADNRLSTVTFGKERPIEVCSEERCYAQNRRAVTVLSAAPGS 175
>gi|244538673|dbj|BAH82826.1| fibronectin-binding protein [Campylobacter lari]
Length = 328
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLRRAYAVFN 111
F ++ P Q + +G LE++ + I EGH D G + + L L RA AV
Sbjct: 223 HFGFDQITVNPEFAQKIQEVGKVLEENPQYYTILEGHTDNTGPKAYNQKLSLERAKAVAK 282
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G++ ++ YG E P ++ A+NRR
Sbjct: 283 ELEKAGVAKEKITTKGYGFEKPIASNDTKEGRAQNRRVE 321
>gi|258405399|ref|YP_003198141.1| OmpA/MotB domain-containing protein [Desulfohalobium retbaense DSM
5692]
gi|257797626|gb|ACV68563.1| OmpA/MotB domain protein [Desulfohalobium retbaense DSM 5692]
Length = 227
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 53/128 (41%), Gaps = 6/128 (4%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIE 86
+ + + Q+ ++ +V FD S ++P + L+ S + +E
Sbjct: 89 ALAQERAASVRREQDILRATFDSNVLFDFDSARVKPGGVSELNRAASVFNRYPQTRIRVE 148
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
GH D GS ++ L RRA AV + V +G+ R+ YG+ P A N
Sbjct: 149 GHTDASGSEEYNMDLSRRRAQAVKDVLVQQGVDPRRVSTVGYGETQPVSSDP-----AAN 203
Query: 147 RRAIVFLK 154
RR V ++
Sbjct: 204 RRVEVVIE 211
>gi|154508489|ref|ZP_02044131.1| hypothetical protein ACTODO_00990 [Actinomyces odontolyticus ATCC
17982]
gi|153798123|gb|EDN80543.1| hypothetical protein ACTODO_00990 [Actinomyces odontolyticus ATCC
17982]
Length = 403
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 45/130 (34%), Gaps = 8/130 (6%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHA 89
P + ++ D V FD IRP Q L +L L I GH
Sbjct: 272 PAVESLKPVESCGTVITLEDGVLFDFGKSDIRPEAAQTLKSLAGVLNNAKVPTAHIYGHT 331
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG------HDEDAY 143
D + ++ L RA AV + ++ + T YG+ P +
Sbjct: 332 DSISDEAFNLQLSQERADAVSAEL-KKDGVSAILDATGYGESKPVAPNENADGSDNPAGR 390
Query: 144 AKNRRAIVFL 153
A NRR +F+
Sbjct: 391 ALNRRVEIFI 400
>gi|78061841|ref|YP_371749.1| hypothetical protein Bcep18194_B0991 [Burkholderia sp. 383]
gi|77969726|gb|ABB11105.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
Length = 434
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 43/127 (33%), Gaps = 4/127 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
++ + + F S++ + ++ + + K I G+ D
Sbjct: 306 AAGTVSVDEDARHSAVTFRGDAMFKPGGASVQASMNPLILKIAGEVAKVPGKVTIIGYTD 365
Query: 91 ELGSRNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ R+ A L RA V A G+ ASR++ G P A+N
Sbjct: 366 NVPIRSRHFASNQVLSEERAIQVMQMLQAAGVPASRLEAVGKGDTDPVGDNRTAQGRAQN 425
Query: 147 RRAIVFL 153
RR + +
Sbjct: 426 RRVEIDV 432
>gi|238790227|ref|ZP_04634002.1| hypothetical protein yfred0001_31620 [Yersinia frederiksenii ATCC
33641]
gi|238721670|gb|EEQ13335.1| hypothetical protein yfred0001_31620 [Yersinia frederiksenii ATCC
33641]
Length = 575
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 40/103 (38%), Gaps = 2/103 (1%)
Query: 53 FFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FD ++ +VL N L K ++ GH D G S+ L L+RA +V N
Sbjct: 444 LFDVGQSILKSGSTKVLINALVGIKAKPGWLIVVAGHTDITGDSQSNQILSLKRAESVRN 503
Query: 112 YFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ G V YG+ P E A NRR + L
Sbjct: 504 WMRDTGDIPESCFAVQGYGESRPLKSNDTEAGRALNRRVEISL 546
>gi|226944839|ref|YP_002799912.1| flagellar motor protein [Azotobacter vinelandii DJ]
gi|226719766|gb|ACO78937.1| Flagellar motor protein [Azotobacter vinelandii DJ]
Length = 275
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 52/144 (36%), Gaps = 4/144 (2%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+G + + + S + + F ++ + ++VL L L
Sbjct: 126 TGDPLQGLPVDQLGKDIEVIVKEGTVSFRISSEILFSSAQADLSLDGLRVLQQLVPVLNS 185
Query: 79 HDCDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
D ++ GH D L S+ L RA +V Y A G++ RM+ P
Sbjct: 186 SRHDIVVVGHTDSLPIRSTRFPSNWELSGARAGSVVRYLEANGVARQRMRAVGLADTRPL 245
Query: 135 VYGHDEDAYAKNRRAIVFLKGCRA 158
+ + A NRR + L+ +A
Sbjct: 246 LENSSPEGRAGNRRVELILETPQA 269
>gi|253998106|ref|YP_003050169.1| OmpA/MotB domain-containing protein [Methylovorus sp. SIP3-4]
gi|253984785|gb|ACT49642.1| OmpA/MotB domain protein [Methylovorus sp. SIP3-4]
Length = 170
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/155 (19%), Positives = 59/155 (38%), Gaps = 10/155 (6%)
Query: 9 ILSAITMMSISGIDNLDTKISSPD---------TVLNESSLQEQFSSSVGDSVFFDTSSY 59
+L+ +++S + + + ++ S D + FDT+
Sbjct: 13 LLAFTLSLTLSACKSTPAAPAQETLRQKQIRTLKEQGFVHTDDGWALSFADKLLFDTNQA 72
Query: 60 SIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI 118
+ + + L+ IEGHAD G + ++ L +RA+AV + F+ G+
Sbjct: 73 VLNDRSRGAVQKVSKALQSVGLDKMRIEGHADATGRESYNVELSEQRAWAVADAFIQSGM 132
Query: 119 SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + V G + P A+NRR + +
Sbjct: 133 PKSGIIVRGMGSQSPVASNATVAGRAENRRVSIIV 167
>gi|160897524|ref|YP_001563106.1| OmpA/MotB domain-containing protein [Delftia acidovorans SPH-1]
gi|160363108|gb|ABX34721.1| OmpA/MotB domain protein [Delftia acidovorans SPH-1]
Length = 174
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 18/162 (11%)
Query: 8 IILSAITMMSISGIDNLDTK-----------------ISSPDTVLNESSLQEQFSSSVGD 50
I+L A + + T+ S V+ + ++ ++V
Sbjct: 10 IVLLAAGLAACGSTATTSTQRSEHHYAFGKAPAPAPASSGVAPVVATTQADQRGPANVAH 69
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAV 109
V+FD +Y+IR +D ++ + WL + ++ GH D G ++ALG +RA AV
Sbjct: 70 IVYFDFDAYTIRNSDRAIVESHAQWLRSNPGRSVMLRGHTDRRGGIEYNLALGQKRADAV 129
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
N G++ +R++ SYGKE + G E+A+ +NRR
Sbjct: 130 RNSLQLLGVNPARVESVSYGKERLADEGTSEEAHQRNRRVEF 171
>gi|254524607|ref|ZP_05136662.1| hypothetical protein SSKA14_3746 [Stenotrophomonas sp. SKA14]
gi|219722198|gb|EED40723.1| hypothetical protein SSKA14_3746 [Stenotrophomonas sp. SKA14]
Length = 250
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 37/140 (26%), Positives = 59/140 (42%), Gaps = 2/140 (1%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVF-FDTSSYSIRPADIQVLS-NLGS 74
S + + L S Q ++ + + F + S + P + +L +
Sbjct: 111 VASDLSLASNTSYTVTNALKVGSQQNVLDQTLANRIIEFQSGSARLTPFGMSILDEMVAK 170
Query: 75 WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
+ D FLI GH D +G R S++ L RA AV NY +++GI S M V G + P
Sbjct: 171 MAQMPDSRFLIIGHTDNVGQRESNLTLSHARALAVKNYMMSKGIPGSHMDVLGKGPDEPV 230
Query: 135 VYGHDEDAYAKNRRAIVFLK 154
D A+NRR ++
Sbjct: 231 ADNTSNDGRARNRRIEFKIQ 250
>gi|91776690|ref|YP_546446.1| OmpA/MotB [Methylobacillus flagellatus KT]
gi|91710677|gb|ABE50605.1| OmpA/MotB [Methylobacillus flagellatus KT]
Length = 180
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 34/180 (18%), Positives = 76/180 (42%), Gaps = 24/180 (13%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSP-----------------------DTVLNE 37
M + + +L A +++ S +T ++ D+ +
Sbjct: 1 MNKNIVISVLLAAMLVACSSKAVKETPQAAVEDKSPVPVQSSTSSSESATSGVSDSSVAS 60
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRN 96
+ L++ + +V+FD S +I+ ++ +L + ++G+ DE G+R
Sbjct: 61 NPLKDPNNILSKRNVYFDFDSDAIKAEFRPLIEAHAQYLNSNSGAKVFLQGNTDERGTRE 120
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
+++LG RRA AV G+ ++++ S+GKE + D+ + ++RR +G
Sbjct: 121 YNLSLGQRRAVAVKKVLNLLGVQDTQIETVSFGKEKANTSCVDDTCWQQDRRVEFVYQGE 180
>gi|262041576|ref|ZP_06014773.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259041137|gb|EEW42211.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 488
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 51/126 (40%), Gaps = 2/126 (1%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGH 88
P+ + + S + FD ++ +VL N L + + ++ G+
Sbjct: 332 PPEKKRDVADALPVQSVRLDSMALFDVGQARLKDGSTKVLINALVNIRARPGWLIVVTGY 391
Query: 89 ADELGSRNSSIALGLRRAYAVFNY-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
D G++ ++ L LRRA AV ++ I A+ V G+ P+ + A NR
Sbjct: 392 TDTTGNKKANQQLSLRRAEAVRDWMLQTSDIPATCFAVQGLGESHPAATNDTPEGRAANR 451
Query: 148 RAIVFL 153
R + L
Sbjct: 452 RVEISL 457
>gi|46579833|ref|YP_010641.1| OmpA family protein [Desulfovibrio vulgaris str. Hildenborough]
gi|46449248|gb|AAS95900.1| OmpA family protein [Desulfovibrio vulgaris str. Hildenborough]
Length = 357
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHAD 90
D +++ V +V F +S + + +L+ ++ + L+ GH
Sbjct: 234 DEQAPKAAAAPMEEVIVLRNVQFALNSAKLDASATSILTEAARIIKANPGKKLLVAGHTC 293
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
LG+ ++ L RA +V ++ V +G+ ASR+ +G+ P E + NRR
Sbjct: 294 NLGTDAYNLKLSDARAKSVKDFLVKQGVEASRLDTFGFGESQPKYDNGTEQGRSMNRRVE 353
Query: 151 VFLK 154
+ +
Sbjct: 354 LSFR 357
>gi|312882154|ref|ZP_07741903.1| hypothetical protein VIBC2010_06184 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309370200|gb|EFP97703.1| hypothetical protein VIBC2010_06184 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 215
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 34/102 (33%), Positives = 49/102 (48%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+ F ++ LS L L+ D IEGH D GS + ALGLRRA A
Sbjct: 103 RLHFGFDQSNLTAMGRDALSQLAESLKNEDSAIAIEGHTDNKGSEGYNQALGLRRALAAS 162
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ G+ A+R+ V SYG+ +P E+ A+NRR+ +
Sbjct: 163 GALLTEGVDANRIVVRSYGENLPIATNSTEEGRAQNRRSEIK 204
>gi|110598524|ref|ZP_01386793.1| OmpA/MotB [Chlorobium ferrooxidans DSM 13031]
gi|110339828|gb|EAT58334.1| OmpA/MotB [Chlorobium ferrooxidans DSM 13031]
Length = 170
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 44/170 (25%), Positives = 71/170 (41%), Gaps = 16/170 (9%)
Query: 1 MQYSTIFIILSAITMMSISGIDNL---------------DTKISSPDTVLNESSLQEQFS 45
M+ + I + A+ + + + S +++
Sbjct: 1 MRKTVNGIFILALMVTAGCSSKSAVTSTESTGGSTSSESSALSSPAQPSTPTGYGFDKYQ 60
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLR 104
+ VFFD S ++ L WL + LIEGH D G+ ++ALG R
Sbjct: 61 TGPLGDVFFDFDSSTLGTEAQGQLKQNSEWLGSNTAKGALIEGHCDSRGTAEYNLALGER 120
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RA Y V G++ASR++ SYG+E P +++A+AKNRRA +K
Sbjct: 121 RAATAKEYLVKLGVAASRLESVSYGEERPFDAAQNDEAWAKNRRAHFVIK 170
>gi|257458255|ref|ZP_05623405.1| OmpA family protein [Treponema vincentii ATCC 35580]
gi|257444365|gb|EEV19458.1| OmpA family protein [Treponema vincentii ATCC 35580]
Length = 436
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 46/124 (37%), Gaps = 2/124 (1%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK--HDCDFLIEGHA 89
+ + + F S I P + L + L+K + FLIEGH
Sbjct: 310 EPESITVKAPKNIIKITMYDIRFVADSAEILPDETGRLDVIAEALKKVGPNTHFLIEGHT 369
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
L L L+RA + RGI ASRM+ YG P + AKNRR
Sbjct: 370 ANLNRPEGERILSLQRADKIAEELAKRGIEASRMETAGYGATRPIAPNDTAENRAKNRRV 429
Query: 150 IVFL 153
+ +
Sbjct: 430 EITI 433
>gi|255037616|ref|YP_003088237.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
18053]
gi|254950372|gb|ACT95072.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
Length = 412
Score = 74.8 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 2/104 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEK-HDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
+++F+TS Y++ P + L+ L + +EGH D +G + ++ L +RA +V
Sbjct: 307 NIYFETSKYTLLPESYEELNRLVDVMSDSPTVKIRVEGHTDNVGDFDKNLELSRQRAESV 366
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
NY V +GI SR++ YG P G E+ KNRR +
Sbjct: 367 KNYLVEKGIEGSRIEAKGYGGTRPITKG-SEEERKKNRRVEFVI 409
>gi|206580585|ref|YP_002236817.1| OmpA domain protein [Klebsiella pneumoniae 342]
gi|206569643|gb|ACI11419.1| OmpA domain protein [Klebsiella pneumoniae 342]
Length = 567
Score = 74.5 bits (181), Expect = 4e-12, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 51/126 (40%), Gaps = 2/126 (1%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGH 88
P+ + + S + FD ++ +VL N L + + ++ G+
Sbjct: 411 PPEKKKDVADALPVQSVRLDSMALFDVGQARLKDGSTKVLINALVNIRARPGWLIVVTGY 470
Query: 89 ADELGSRNSSIALGLRRAYAVFNY-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
D G++ ++ L LRRA AV ++ I A+ V G+ P+ + A NR
Sbjct: 471 TDTTGNKKANQQLSLRRAEAVRDWMLQTSDIPATCFAVQGLGESHPAATNDTPEGRAANR 530
Query: 148 RAIVFL 153
R + L
Sbjct: 531 RVEISL 536
>gi|163782256|ref|ZP_02177254.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hydrogenivirga sp. 128-5-R1-1]
gi|159882289|gb|EDP75795.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hydrogenivirga sp. 128-5-R1-1]
Length = 313
Score = 74.5 bits (181), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 2/103 (1%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+ FD S I+P + L + +L+ + + GH D GS + ++ L L+RA AV
Sbjct: 209 IHFDHGSAVIKPGSEKTLKEIARYLKMNPKARLYVVGHTDGTGSYDYNLKLSLKRAEAVV 268
Query: 111 NYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
V GIS R+K G P + A+NRR +
Sbjct: 269 RRLVKEYGISPKRLKAVGVGPVAPVDTNRTPEGRARNRRVELV 311
>gi|104782795|ref|YP_609293.1| flagellar motor protein MotD [Pseudomonas entomophila L48]
gi|95111782|emb|CAK16506.1| flagellar motor protein MotB [Pseudomonas entomophila L48]
Length = 285
Score = 74.5 bits (181), Expect = 4e-12, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 43/115 (37%), Gaps = 4/115 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ S+ F ++ +++ + L+ +EG D L ++
Sbjct: 130 VEIELNSSLLFASADAMPSDVAFEIIEKVAKILKPFANPVHVEGFTDNLPIRTAQYPTNW 189
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L RA ++ G++ +RM YG+ P D A+NRR ++ +
Sbjct: 190 ELSSARAASIVRLLAMEGVNPARMASVGYGEYQPVAGNDTADGRARNRRVVLVIS 244
>gi|28211321|ref|NP_782265.1| chemotaxis motB protein [Clostridium tetani E88]
gi|28203761|gb|AAO36202.1| chemotaxis motB protein [Clostridium tetani E88]
Length = 252
Score = 74.5 bits (181), Expect = 4e-12, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 50/136 (36%), Gaps = 5/136 (3%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD 82
+ S+ + S + DS+ F+ + I+ + +L + +
Sbjct: 107 KSAVQKSNLQESVKIKSDARGVLLELDDSILFEIAQADIKQNSLPILDKINKIISTLPNS 166
Query: 83 FLIEGHADE----LGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYG 137
++EGH D +S+ L +RA V YF + + R YG+ P
Sbjct: 167 VMVEGHTDNVPIKNYKYDSNWELSTQRAVNVLRYFVETKKQNPQRFTAAGYGEFKPIHPN 226
Query: 138 HDEDAYAKNRRAIVFL 153
+ +KNRR + +
Sbjct: 227 DTLENRSKNRRVTIVI 242
>gi|329888485|ref|ZP_08267083.1| inner membrane lipoprotein yiaD [Brevundimonas diminuta ATCC 11568]
gi|328847041|gb|EGF96603.1| inner membrane lipoprotein yiaD [Brevundimonas diminuta ATCC 11568]
Length = 224
Score = 74.5 bits (181), Expect = 4e-12, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 1/114 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIA 100
+ + V F T+ + P + VL ++ + + GH D G +
Sbjct: 107 DNLVLRMPSDVTFATNQSDLDPRFLPVLDDVARVLNQYDRSMVDVVGHTDSSGGDAINQP 166
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L RRA +V + + RG+ R+ V P + A+NRR + ++
Sbjct: 167 LSERRAASVAAHLINRGVMRERIYVAGMSARAPIGSNATPEGKAQNRRVEILIR 220
>gi|237718629|ref|ZP_04549110.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|229452089|gb|EEO57880.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
Length = 290
Score = 74.5 bits (181), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 6/114 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHAD----ELGSRNSSIA 100
S+ D++ + + SY I VLS + ++ + D D L+EG+ D + ++
Sbjct: 147 ISLADNMLYKSGSYEISNKAEAVLSKIAKIIQDYKDYDVLVEGNTDTDPISRTNIRNNWD 206
Query: 101 LGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V GI+ R+ G+ P + A+NRR + +
Sbjct: 207 LSALRASSVVQALQNIYGINPKRLTAAGRGEFNPVAGNDTAEGKARNRRTEIII 260
>gi|332528553|ref|ZP_08404541.1| peptidoglycaN-associated lipoprotein [Hylemonella gracilis ATCC
19624]
gi|332042064|gb|EGI78402.1| peptidoglycaN-associated lipoprotein [Hylemonella gracilis ATCC
19624]
Length = 189
Score = 74.5 bits (181), Expect = 4e-12, Method: Composition-based stats.
Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 1/141 (0%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
+ + + + + + V V+FD S +I+P V+
Sbjct: 49 VTTAAPEAKPAQASAPTPAAAVPVAKPADSIADVAKLVYFDYDSSAIKPEFRAVIEAHAR 108
Query: 75 WLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
+++ + I GHADE G ++ALG RRA AV V G+++S+++ S+GKE P
Sbjct: 109 FMQSNPARSVTIAGHADERGGTEYNLALGQRRADAVRQMLVLLGVNSSQIETISFGKEKP 168
Query: 134 SVYGHDEDAYAKNRRAIVFLK 154
+V G +E A+AKNRRA + K
Sbjct: 169 AVRGSNEAAWAKNRRAEITYK 189
>gi|293194231|ref|ZP_06609953.1| photosystem I P700 chlorophyll a apoprotein A2 [Actinomyces
odontolyticus F0309]
gi|292819750|gb|EFF78763.1| photosystem I P700 chlorophyll a apoprotein A2 [Actinomyces
odontolyticus F0309]
Length = 403
Score = 74.5 bits (181), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 45/130 (34%), Gaps = 8/130 (6%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHA 89
P + ++ D V FD IRP Q L +L L I GH
Sbjct: 272 PAVESLKPVESCGTVITLEDGVLFDFGKSDIRPEAAQTLKSLAGVLNNAKVPTAHIYGHT 331
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG------HDEDAY 143
D + ++ L RA AV + ++ + T YG+ P +
Sbjct: 332 DSISDEAFNLQLSQERADAVSAEL-KKDGVSAILDATGYGESKPVAPNENADGSDNPAGR 390
Query: 144 AKNRRAIVFL 153
A NRR +F+
Sbjct: 391 ALNRRVEIFI 400
>gi|288917360|ref|ZP_06411727.1| OmpA/MotB domain protein [Frankia sp. EUN1f]
gi|288351225|gb|EFC85435.1| OmpA/MotB domain protein [Frankia sp. EUN1f]
Length = 409
Score = 74.5 bits (181), Expect = 4e-12, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 58/144 (40%), Gaps = 2/144 (1%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQ--FSSSVGDSVFFDTSSYSIRPADIQV 68
S++T S++ D + + E+ + ++ G S+ F ++ +
Sbjct: 262 SSVTAPSVTAPSAPDPSATGSAGAVPEAGRTQGALQAALEGTSLTFAVGESTLDASVRAG 321
Query: 69 LSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L + L D L+ GH D G + AL + RA A Y V RG+ A R++V +
Sbjct: 322 LDKVAQALLPGDLTVLVGGHTDSTGPLAFNQALSMDRARAAREYLVQRGVPAERVRVAGF 381
Query: 129 GKEMPSVYGHDEDAYAKNRRAIVF 152
G E P A NRR V
Sbjct: 382 GPERPVADNATVAGRAANRRVDVT 405
>gi|239906259|ref|YP_002952999.1| chemotaxis protein MotB [Desulfovibrio magneticus RS-1]
gi|239796124|dbj|BAH75113.1| chemotaxis protein MotB [Desulfovibrio magneticus RS-1]
Length = 341
Score = 74.5 bits (181), Expect = 4e-12, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 51/140 (36%), Gaps = 10/140 (7%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL 84
K+ + ++ + FFD +S ++P I +L ++ + L
Sbjct: 201 SGKLDVTAGAVEVRPRDNGVELNLRGAAFFDLASAEVKPGGIPLLRDIAATLAGTPYKVT 260
Query: 85 IEGHADELGSRNS----SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+EGH D L + + L RA V + + G++ ++V P D
Sbjct: 261 VEGHTDNLPMESWLYPSNWELSSARASRVARFLIDHGVARDHLRVEGLADTQPVAPNTDP 320
Query: 141 DAY------AKNRRAIVFLK 154
A+NRR ++ +
Sbjct: 321 AGRSIPENQARNRRVVILVS 340
>gi|284037429|ref|YP_003387359.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
gi|283816722|gb|ADB38560.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
Length = 704
Score = 74.5 bits (181), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 1/105 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYA 108
V F S +++ P L + +E H LIEGH D G ++ L R
Sbjct: 597 REVLFQQSQFTLLPGADTELDKMADMMETHPTMELLIEGHTDNQGDWEPNMKLAEDRVRV 656
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V Y + +GI R++ ++G P E+ NRR +
Sbjct: 657 VKEYLLKKGIKPERIQTKAWGPSKPIASNETEEKRKLNRRVEFTI 701
>gi|120602698|ref|YP_967098.1| OmpA/MotB domain-containing protein [Desulfovibrio vulgaris DP4]
gi|120562927|gb|ABM28671.1| OmpA/MotB domain protein [Desulfovibrio vulgaris DP4]
gi|311234162|gb|ADP87016.1| OmpA/MotB domain protein [Desulfovibrio vulgaris RCH1]
Length = 344
Score = 74.5 bits (181), Expect = 4e-12, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHAD 90
D +++ V +V F +S + + +L+ ++ + L+ GH
Sbjct: 221 DEQAPKAAAAPMEEVIVLRNVQFALNSAKLDASATSILTEAARIIKANPGKKLLVAGHTC 280
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
LG+ ++ L RA +V ++ V +G+ ASR+ +G+ P E + NRR
Sbjct: 281 NLGTDAYNLKLSDARAKSVKDFLVKQGVEASRLDTFGFGESQPKYDNGTEQGRSMNRRVE 340
Query: 151 VFLK 154
+ +
Sbjct: 341 LSFR 344
>gi|83941418|ref|ZP_00953880.1| OmpA domain protein [Sulfitobacter sp. EE-36]
gi|83847238|gb|EAP85113.1| OmpA domain protein [Sulfitobacter sp. EE-36]
Length = 632
Score = 74.5 bits (181), Expect = 4e-12, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 43/120 (35%), Gaps = 1/120 (0%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELG 93
+ E + F+ S +I + + + + L+ ++G+ D G
Sbjct: 479 TPQECEAEIGKVVAKGKINFEPGSATIDASALGTMDQIAEILQDCRDIALEVQGYTDSQG 538
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++AL RA +V N AR + YG+E P E+ NRR L
Sbjct: 539 REEMNLALSQSRAQSVLNELRARRVITGSFVAKGYGEESPVASNDTEEGREANRRIEFKL 598
>gi|323495647|ref|ZP_08100718.1| outer membrane protein [Vibrio sinaloensis DSM 21326]
gi|323319282|gb|EGA72222.1| outer membrane protein [Vibrio sinaloensis DSM 21326]
Length = 211
Score = 74.5 bits (181), Expect = 4e-12, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 57/117 (48%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
L S+++ S V V+F+ ++ VL+ + +E + + GH D +G
Sbjct: 92 LTNSAIEFSNSPEVIARVYFNFDDSTLTQQSEYVLTRVMRLIESQARNIELAGHTDNVGD 151
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ +LGLRR+ AV +Y V RG+ R+ TS+G+ P V ++ NRR V
Sbjct: 152 AGYNFSLGLRRSKAVEDYLVERGVDTKRITTTSFGENKPFVDNMSDENRKLNRRVEV 208
>gi|270263786|ref|ZP_06192055.1| peptidoglycan-associated outer membrane lipoprotein [Serratia
odorifera 4Rx13]
gi|270042670|gb|EFA15765.1| peptidoglycan-associated outer membrane lipoprotein [Serratia
odorifera 4Rx13]
Length = 180
Score = 74.5 bits (181), Expect = 4e-12, Method: Composition-based stats.
Identities = 45/124 (36%), Positives = 65/124 (52%), Gaps = 1/124 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGH 88
S + E + + + V+F Y + ++L + +EGH
Sbjct: 56 SSNLSSEEQARLQMQELQKNNIVYFGLDKYDVSSEFAEMLDAHSAFLRNNPSYKVTVEGH 115
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
ADE G+ +IALG RRA AV Y +G+SA ++ + SYGKE P+V GHDE AYAKNRR
Sbjct: 116 ADERGTPEYNIALGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYAKNRR 175
Query: 149 AIVF 152
A++
Sbjct: 176 AVLV 179
>gi|172064681|ref|YP_001812331.1| DotU family type IV/VI secretion system protein [Burkholderia
ambifaria MC40-6]
gi|171998166|gb|ACB69082.1| type IV / VI secretion system protein, DotU family [Burkholderia
ambifaria MC40-6]
Length = 436
Score = 74.5 bits (181), Expect = 4e-12, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 39/127 (30%), Gaps = 4/127 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
L + F + ++ P L +G + + L+ GH D
Sbjct: 310 LTVDEDDRRSVVVFKGDSMFASGQSTVLPVVEPALGKVGGEVARVGGSVLVRGHTDNQPI 369
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
S++ L +RA V RG A R+ G P A NRR
Sbjct: 370 RSAVFPSNLVLSEKRAAYVAQILQQRGTPADRIHAIGKGDTQPVGDNATAAGRALNRRVE 429
Query: 151 VFLKGCR 157
+ + R
Sbjct: 430 IVVTQQR 436
>gi|83950613|ref|ZP_00959346.1| OmpA domain protein [Roseovarius nubinhibens ISM]
gi|83838512|gb|EAP77808.1| OmpA domain protein [Roseovarius nubinhibens ISM]
Length = 641
Score = 74.5 bits (181), Expect = 4e-12, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 43/124 (34%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHA 89
E + + + F+ S + +L ++ L+K + I G+
Sbjct: 479 AALPTPEECVSKIQLIVAERKINFEPGSDKLDSNGAAILDDIAEILKKCGEIKLEIAGYT 538
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G + + L RA AV + R + S + YG+ P ++ NRR
Sbjct: 539 DSQGRESMNQQLSENRARAVLDGLRMRRVITSTYEAVGYGENDPIADNDSDEGREANRRI 598
Query: 150 IVFL 153
L
Sbjct: 599 EFHL 602
>gi|294084383|ref|YP_003551141.1| flagellar MotB protein [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663956|gb|ADE39057.1| flagellar MotB protein [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 384
Score = 74.5 bits (181), Expect = 4e-12, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 45/125 (36%), Gaps = 6/125 (4%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG- 93
+ +++ +VG F + S + + +++ + + GH D +
Sbjct: 258 VTVEREEDRVLITVGSGGAFASGSAELTDSAREIMQQIAEVSAGGSSSINVSGHTDNVPL 317
Query: 94 ----SRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
+ L RA +V G +RM+ S+G+ MP + A NRR
Sbjct: 318 IFGSQFRDNWDLAAARASSVVQALEDSGQVPGNRMQAVSFGESMPLESNDTAEGRALNRR 377
Query: 149 AIVFL 153
+ +
Sbjct: 378 IEIEI 382
>gi|294670063|ref|ZP_06735018.1| OmpA family protein [Neisseria elongata subsp. glycolytica ATCC
29315]
gi|291308146|gb|EFE49389.1| OmpA family protein [Neisseria elongata subsp. glycolytica ATCC
29315]
Length = 162
Score = 74.5 bits (181), Expect = 4e-12, Method: Composition-based stats.
Identities = 36/124 (29%), Positives = 56/124 (45%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHA 89
+T ++ Q + ++V F T+S ++ L+ L HD I GH
Sbjct: 24 ANTGVDVERNGNQIKLVMPENVTFPTNSSTLNANAQNALAAAAQTLTQYHDTTLTINGHT 83
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GS + L RRA AV +Y +RG+SASRM + +G P + A+NRR
Sbjct: 84 DNTGSDAINDPLSQRRAQAVASYLQSRGVSASRMNIFGHGSRQPIASNATVEGRAQNRRV 143
Query: 150 IVFL 153
+ +
Sbjct: 144 EILI 147
>gi|323963914|gb|EGB59407.1| OmpA family protein [Escherichia coli M863]
Length = 160
Score = 74.5 bits (181), Expect = 4e-12, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 56/149 (37%), Gaps = 3/149 (2%)
Query: 8 IILSAITMMSISGIDNL-DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADI 66
+I +++ + + + + +S + D++ F + Y + P
Sbjct: 9 LIFTSLVLTGCQSPQGKFTPEQVAAMQSYGFTESAGDWSLGLSDAILFAKNDYKLLPESQ 68
Query: 67 QVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASR-MK 124
Q + + + L ++GH D G + + AL L+RA V + + G R +
Sbjct: 69 QQIQTMAAKLASTGLTHARMDGHTDNYGEDSYNEALSLKRANVVADAWAMGGQIPRRNLT 128
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
GK+ P A+NRR V +
Sbjct: 129 TQGLGKKYPIASNKTAQGRAENRRVAVVI 157
>gi|15641208|ref|NP_230840.1| putative lipoprotein [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121587785|ref|ZP_01677544.1| lipoprotein, putative [Vibrio cholerae 2740-80]
gi|121728252|ref|ZP_01681285.1| lipoprotein, putative [Vibrio cholerae V52]
gi|147673077|ref|YP_001216765.1| putative lipoprotein [Vibrio cholerae O395]
gi|153819084|ref|ZP_01971751.1| lipoprotein, putative [Vibrio cholerae NCTC 8457]
gi|153823238|ref|ZP_01975905.1| lipoprotein, putative [Vibrio cholerae B33]
gi|227081367|ref|YP_002809918.1| putative lipoprotein [Vibrio cholerae M66-2]
gi|229505212|ref|ZP_04394722.1| outer membrane protein [Vibrio cholerae BX 330286]
gi|229511118|ref|ZP_04400597.1| outer membrane protein [Vibrio cholerae B33]
gi|229518237|ref|ZP_04407681.1| outer membrane protein [Vibrio cholerae RC9]
gi|229608231|ref|YP_002878879.1| outer membrane protein [Vibrio cholerae MJ-1236]
gi|255745601|ref|ZP_05419549.1| outer membrane protein [Vibrio cholera CIRS 101]
gi|262158324|ref|ZP_06029440.1| outer membrane protein [Vibrio cholerae INDRE 91/1]
gi|262169483|ref|ZP_06037175.1| outer membrane protein [Vibrio cholerae RC27]
gi|298498705|ref|ZP_07008512.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|9655673|gb|AAF94354.1| lipoprotein, putative [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121547949|gb|EAX58030.1| lipoprotein, putative [Vibrio cholerae 2740-80]
gi|121629503|gb|EAX61929.1| lipoprotein, putative [Vibrio cholerae V52]
gi|126510367|gb|EAZ72961.1| lipoprotein, putative [Vibrio cholerae NCTC 8457]
gi|126519252|gb|EAZ76475.1| lipoprotein, putative [Vibrio cholerae B33]
gi|146314960|gb|ABQ19499.1| putative lipoprotein [Vibrio cholerae O395]
gi|227009255|gb|ACP05467.1| putative lipoprotein [Vibrio cholerae M66-2]
gi|227013112|gb|ACP09322.1| putative lipoprotein [Vibrio cholerae O395]
gi|229344952|gb|EEO09926.1| outer membrane protein [Vibrio cholerae RC9]
gi|229351083|gb|EEO16024.1| outer membrane protein [Vibrio cholerae B33]
gi|229357435|gb|EEO22352.1| outer membrane protein [Vibrio cholerae BX 330286]
gi|229370886|gb|ACQ61309.1| outer membrane protein [Vibrio cholerae MJ-1236]
gi|255736676|gb|EET92073.1| outer membrane protein [Vibrio cholera CIRS 101]
gi|262022296|gb|EEY41005.1| outer membrane protein [Vibrio cholerae RC27]
gi|262029765|gb|EEY48413.1| outer membrane protein [Vibrio cholerae INDRE 91/1]
gi|297543038|gb|EFH79088.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
Length = 223
Score = 74.5 bits (181), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSI 99
+ Q + + + F ++SY + + L + +E D +IEGH D GS ++
Sbjct: 106 ENQLMLRMENGIGFTSNSYQLDSYIHKTLRGVARILVEYPDTSLVIEGHTDSTGSDTTNQ 165
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L +RA +V ++ +++G++A R G+ P + + A NRR + +
Sbjct: 166 VLSEKRAESVRSFLLSQGVAAGRAIARGNGERFPLCSNNTAEGRACNRRVEIQI 219
>gi|90412166|ref|ZP_01220172.1| Conserved hypothetical outer membrane protein [Photobacterium
profundum 3TCK]
gi|90326890|gb|EAS43275.1| Conserved hypothetical outer membrane protein [Photobacterium
profundum 3TCK]
Length = 220
Score = 74.5 bits (181), Expect = 4e-12, Method: Composition-based stats.
Identities = 31/145 (21%), Positives = 61/145 (42%), Gaps = 3/145 (2%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQ 67
I + + +++ + I + + + +LN + Q++ + V+F S + P
Sbjct: 78 IKAALLALITETNIGSQCWEYLNTAGLLNTTRTQDKNLIA---RVYFAFDSQHLTPESQT 134
Query: 68 VLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
VL + L+ + GH D +G + + LGL+RA + Y + + + +K +
Sbjct: 135 VLKTIAQKLKNSPQTVTLNGHTDSVGPQGYNYTLGLQRAKSSMQYLIDNEVKDTNLKSKT 194
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVF 152
YG+ P A NRR V
Sbjct: 195 YGETQPIESNTTSQGRAMNRRVDVV 219
>gi|317049660|ref|YP_004117308.1| OmpA/MotB domain-containing protein [Pantoea sp. At-9b]
gi|316951277|gb|ADU70752.1| OmpA/MotB domain protein [Pantoea sp. At-9b]
Length = 528
Score = 74.5 bits (181), Expect = 4e-12, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 46/126 (36%), Gaps = 2/126 (1%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGH 88
P + + + + FD+ ++P ++L L K +I GH
Sbjct: 375 QPPPSHPLAPQPQATIAQLDSLALFDSGKAELKPGSTKMLIKALVGIRAKPGWLIVISGH 434
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNR 147
D G + L L+RA AV N+ G A V YG P V + A NR
Sbjct: 435 TDNTGDPAFNQQLSLQRAEAVRNWMRDTGAIAESCFAVQGYGVSRPLVTNDTPEGRATNR 494
Query: 148 RAIVFL 153
R + L
Sbjct: 495 RVDIRL 500
>gi|228474126|ref|ZP_04058867.1| inner membrane lipoprotein YiaD [Capnocytophaga gingivalis ATCC
33624]
gi|228274640|gb|EEK13481.1| inner membrane lipoprotein YiaD [Capnocytophaga gingivalis ATCC
33624]
Length = 231
Score = 74.5 bits (181), Expect = 4e-12, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 57/135 (42%), Gaps = 3/135 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDS--VFFDTSSYSIRPADIQVLSNLGSWLEKH 79
D KI + + + + V F+ + + +L+ + L+++
Sbjct: 81 DRQAKKIEEEIPGAEVKRVDDGIVVTFDEKSGVTFEFNKADLTSEAKTLLTKMAGVLKEY 140
Query: 80 D-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ ++ GH D G ++ L RRA AV N+F A G+ ASR +G P+
Sbjct: 141 PDTNVIVAGHTDSKGKPAYNMGLSERRAKAVTNFFTASGLKASRFTTKWFGATQPAYDNS 200
Query: 139 DEDAYAKNRRAIVFL 153
E+ AKNRR + +
Sbjct: 201 TEEGRAKNRRVNIAI 215
>gi|212704937|ref|ZP_03313065.1| hypothetical protein DESPIG_03004 [Desulfovibrio piger ATCC 29098]
gi|212671601|gb|EEB32084.1| hypothetical protein DESPIG_03004 [Desulfovibrio piger ATCC 29098]
Length = 155
Score = 74.5 bits (181), Expect = 4e-12, Method: Composition-based stats.
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 3/149 (2%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ + + L + + + G T+ ++ D ++ V F +
Sbjct: 1 MKRYALILAL-VMALAAGFGCAK-KTQDATGDVDDMSPEMRAAIQQITDGRVLFAFDKFD 58
Query: 61 IRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
I+P +L+ + IEG+ DE G++ ++ALG RRA A ++Y V G++
Sbjct: 59 IQPQYKDMLTAKAELMKKYPSIRVRIEGNCDERGTQEYNLALGERRARAAYDYMVRLGVN 118
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
++++ SYGKE P V G E +A+NRR
Sbjct: 119 PGQLEMISYGKEKPVVQGSGESVWAQNRR 147
>gi|197336770|ref|YP_002158098.1| outer membrane protein [Vibrio fischeri MJ11]
gi|197314022|gb|ACH63471.1| outer membrane protein [Vibrio fischeri MJ11]
Length = 208
Score = 74.5 bits (181), Expect = 4e-12, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 49/114 (42%), Gaps = 1/114 (0%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSI 99
+Q S+ + V F ++ + P +L+ + K + +++GH D G +
Sbjct: 90 NDQLVISIQEKVHFSSAKAELTPLARSLLNKLIVVMSSKPELALVLDGHTDVTGDPIKNQ 149
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L +R+ V Y +A ++AS++ +G+ +P NRR + +
Sbjct: 150 NLSEQRSNEVRRYLLANKLNASQLYSRGFGEYLPLCDNDTILGRKCNRRVEITI 203
>gi|197116453|ref|YP_002136880.1| OmpA family outer membrane lipoprotein [Geobacter bemidjiensis Bem]
gi|197085813|gb|ACH37084.1| OmpA family outer membrane lipoprotein [Geobacter bemidjiensis Bem]
Length = 333
Score = 74.5 bits (181), Expect = 4e-12, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 56/144 (38%), Gaps = 2/144 (1%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
IL + G D K++ + + +V FDT+ I+P
Sbjct: 184 ILYTLVCTGPGGAARSDAKVAVTAPPVPVPVPPVKLCKPAVLNVHFDTNKSDIKPQYHDE 243
Query: 69 LSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVT 126
L L +L++ IEGH D +G + +++ L RRA +V Y V + R+K
Sbjct: 244 LKALADFLKEFPNATGTIEGHTDSVGDKAANMKLSQRRADSVRKYLVDKFGIAPERVKAV 303
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAI 150
YG P+ KNRR
Sbjct: 304 GYGPTKPAADNKTAAGKQKNRRIE 327
>gi|30314416|gb|AAP15417.1| outer membrane lipoprotein precursor [Burkholderia stabilis]
Length = 150
Score = 74.5 bits (181), Expect = 4e-12, Method: Composition-based stats.
Identities = 43/137 (31%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 18 ISGIDNLDTKISSPDTV-LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+ + T+ S+ + +N L + S S++FD SYS++ ++ +L
Sbjct: 11 ANNAGAVSTQPSADNVAQVNVDPLNDPNSPLAKRSIYFDFDSYSVKDDYQSLMQQHAQYL 70
Query: 77 EKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+ H LI+G+ DE G+ ++ALG +RA AV G++ S+M+ S GKE P
Sbjct: 71 KSHPQRHVLIQGNTDERGTSEYNLALGQKRAEAVRRAMALPGVNDSQMEAVSLGKEKPQA 130
Query: 136 YGHDEDAYAKNRRAIVF 152
GHDE ++A+NRRA +
Sbjct: 131 TGHDEASWAQNRRADLV 147
>gi|305432269|ref|ZP_07401432.1| fibronectin-binding protein [Campylobacter coli JV20]
gi|304444617|gb|EFM37267.1| fibronectin-binding protein [Campylobacter coli JV20]
Length = 332
Score = 74.5 bits (181), Expect = 4e-12, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FD +I PA + + + E D ++EGH D +GSR+ + L RRA +V
Sbjct: 228 HFDFDKVNINPAFEEQIKEIAQILDENVRYDTILEGHTDNIGSRSYNQKLSERRANSVAK 287
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G+ SR++ YG++ P ++ A NRR
Sbjct: 288 ELEKFGVDKSRIQTVGYGQDKPRSSNDTKEGRADNRRVE 326
>gi|302343053|ref|YP_003807582.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075]
gi|301639666|gb|ADK84988.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075]
Length = 247
Score = 74.5 bits (181), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 46/128 (35%), Gaps = 4/128 (3%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGH 88
+ + +N ++ + V +FF+ IR ++L + +K D +EGH
Sbjct: 109 TGLGSEVNVNAGNKGVRLRVKGHLFFEPGGAEIRQEAKKLLEGIAKVTKKFDFYLTVEGH 168
Query: 89 ADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
D+ S+ L RA AV Y G+ RM Y P E
Sbjct: 169 TDDQPISTPRFPSNWELSAARAAAVLRYLAGDGVPEKRMSAIGYASSFPIAANTSEAGRN 228
Query: 145 KNRRAIVF 152
KNRR
Sbjct: 229 KNRRVEFV 236
>gi|157889021|dbj|BAF80966.1| fibronectin-binding protein [Campylobacter lari]
Length = 328
Score = 74.5 bits (181), Expect = 4e-12, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 1/107 (0%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGL 103
++ F +I P Q + +G LE++ + I EGH D GS+ + L L
Sbjct: 215 EKTIALEGHFGFDQTNINPEFAQKIQEVGKILEENPQYYTILEGHTDSTGSKTYNQKLSL 274
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
RA AV G++ ++ YG E P ++ A+NRR
Sbjct: 275 ERAKAVAKELEKTGVAKEKIVTKGYGFEKPKASNDTKEGRAQNRRVE 321
>gi|330947752|gb|EGH48208.1| OmpA/MotB [Pseudomonas syringae pv. pisi str. 1704B]
Length = 102
Score = 74.5 bits (181), Expect = 4e-12, Method: Composition-based stats.
Identities = 24/94 (25%), Positives = 37/94 (39%)
Query: 65 DIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L + IEG+ D G R ++ L RA AV + + G+ R+
Sbjct: 3 SRTILKVVQFLQINPRRVVRIEGYTDSTGDRQDNLKLSKDRAQAVADVLMDLGVDEKRIH 62
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
V YG+E P E A+NRR + +
Sbjct: 63 VEGYGQEFPVNANTSERGRAQNRRVEIVFSDEKG 96
>gi|298291600|ref|YP_003693539.1| OmpA/MotB domain protein [Starkeya novella DSM 506]
gi|296928111|gb|ADH88920.1| OmpA/MotB domain protein [Starkeya novella DSM 506]
Length = 336
Score = 74.5 bits (181), Expect = 4e-12, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 59/142 (41%), Gaps = 3/142 (2%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL 72
+ + + G +I + E +L + ++ ++FD I+P ++ L
Sbjct: 189 VAVTIVKGKAMDTGQIKVIEASEMERALAKDGRIAI-YGIYFDFDKADIKPESEAQIAQL 247
Query: 73 GSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGK 130
S L+ LI GH D G+ + +++L RRA AV N ++ A +R G
Sbjct: 248 ASLLKSNPQLGVLIVGHTDGHGAFDYNLSLSQRRAQAVANRLTSQHGIAANRTTPAGAGM 307
Query: 131 EMPSVYGHDEDAYAKNRRAIVF 152
P E+ AKNRR +
Sbjct: 308 IAPVASNRTEEGRAKNRRVEIV 329
>gi|59713511|ref|YP_206286.1| outer membrane lipoprotein [Vibrio fischeri ES114]
gi|197337177|ref|YP_002157921.1| inner membrane lipoprotein YiaD [Vibrio fischeri MJ11]
gi|59481759|gb|AAW87398.1| predicted outer membrane lipoprotein [Vibrio fischeri ES114]
gi|197314429|gb|ACH63878.1| inner membrane lipoprotein YiaD [Vibrio fischeri MJ11]
Length = 222
Score = 74.5 bits (181), Expect = 4e-12, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 52/123 (42%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
V E + + + + + F +SSY + + L+ + +E D I+GH D
Sbjct: 96 SGVQVERVGKNELKLVMDNGIGFQSSSYQLDASIYNTLNGVARILVEYPDTALQIDGHTD 155
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G+ + L +RA +V Y + + ++A R+ YG P + A NRR
Sbjct: 156 SSGNATKNQTLSEQRADSVRTYLIKQDVAAGRVNARGYGARYPVCDNSTKQGRACNRRVE 215
Query: 151 VFL 153
+ +
Sbjct: 216 ITI 218
>gi|83643650|ref|YP_432085.1| outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hahella chejuensis KCTC 2396]
gi|83631693|gb|ABC27660.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hahella chejuensis KCTC 2396]
Length = 464
Score = 74.5 bits (181), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 56/139 (40%), Gaps = 2/139 (1%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
G+D +Q + ++ +V F T+S +I + + L ++ ++
Sbjct: 321 GLDACPDTPYGAKVDNRGCRIQLSETVTITLNVTFPTNSAAITDEFVSEVEKLAEFMRQY 380
Query: 80 D-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYG 137
++EGH D+ G + L +RA AV V R A R+ YG+ P
Sbjct: 381 PDTKAVVEGHTDDRGQDAYNQKLSEKRASAVRQMVVERFGIAGERISSVGYGETRPIGDN 440
Query: 138 HDEDAYAKNRRAIVFLKGC 156
+ D + NRR + ++
Sbjct: 441 NTADGRSANRRVVGVVEAT 459
>gi|313200172|ref|YP_004038830.1| ompa/motb domain-containing protein [Methylovorus sp. MP688]
gi|312439488|gb|ADQ83594.1| OmpA/MotB domain protein [Methylovorus sp. MP688]
Length = 170
Score = 74.5 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 30/155 (19%), Positives = 59/155 (38%), Gaps = 10/155 (6%)
Query: 9 ILSAITMMSISGIDNLDTKISSPD---------TVLNESSLQEQFSSSVGDSVFFDTSSY 59
+L+ +++S + + + ++ S D + FDT+
Sbjct: 13 LLAFTLSLTLSACKSTPAAPAQETLRQKQIRTLKEQGFVHTDDGWALSFADKLLFDTNQA 72
Query: 60 SIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI 118
+ + + L+ IEGHAD G + ++ L +RA+AV + F+ G+
Sbjct: 73 VLNDRSRGAVQKVSKALQSVGLNKMRIEGHADATGRESYNVELSEQRAWAVADAFIQSGM 132
Query: 119 SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + V G + P A+NRR + +
Sbjct: 133 PKSGIIVRGMGSQSPVASNATVAGRAENRRVSIIV 167
>gi|66046660|ref|YP_236501.1| flagellar motor protein MotD [Pseudomonas syringae pv. syringae
B728a]
gi|63257367|gb|AAY38463.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
gi|330972462|gb|EGH72528.1| flagellar motor protein MotD [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 295
Score = 74.5 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 43/115 (37%), Gaps = 4/115 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ S+ F + ++ + +++ D +EG D+ ++
Sbjct: 130 IEIELNSSMLFGSGDAMPSDKAFTIIEKVAGIVKRFDNPIHVEGFTDDQPISTAQFPTNW 189
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L R+ ++ G++ +R+ YG+ P V AKNRR ++ +
Sbjct: 190 ELSSARSASIVRMLAMDGVNPARLASVGYGEFQPIVPNTSTAGRAKNRRVVLVIS 244
>gi|255531961|ref|YP_003092333.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366]
gi|255344945|gb|ACU04271.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366]
Length = 631
Score = 74.5 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRA 106
V ++FF+T+ Y++ PA + L+ L L+ + I+GH D +G+ + L L+RA
Sbjct: 522 VLKNIFFNTNEYTLLPASLTELNTLQQLLKNNASLCIEIQGHTDNVGNDQQNERLSLQRA 581
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV++Y V I R+ YG+ P + +NRR +
Sbjct: 582 KAVYDYLVQEKIEPQRLTFKGYGENKPIAANDTDAHRRQNRRTSFII 628
>gi|156975609|ref|YP_001446516.1| hypothetical protein VIBHAR_03342 [Vibrio harveyi ATCC BAA-1116]
gi|156527203|gb|ABU72289.1| hypothetical protein VIBHAR_03342 [Vibrio harveyi ATCC BAA-1116]
Length = 230
Score = 74.5 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 49/103 (47%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
V F +++ P VLS++ L + D +EGH D +G++ + LG RA +
Sbjct: 116 RVHFAFDRFNLTPLARDVLSSVARQLAQTDYQVTVEGHTDWIGTKAYNQTLGHNRAKSTA 175
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G+S + + S+G+ P + +KNRRA V++
Sbjct: 176 RELHYYGVSEQKTTLKSFGESEPIATNNTSSGRSKNRRADVYI 218
>gi|326798930|ref|YP_004316749.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
gi|326549694|gb|ADZ78079.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
Length = 229
Score = 74.5 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 36/133 (27%), Positives = 51/133 (38%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
D +I E + F +++P + NL + D
Sbjct: 81 DKQAAEIERTVDGAEVVQAGEGIIVKFDSGILFGFDQTALKPEAQTNIKNLVKSLNDNPD 140
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
D LI GH D G+ + L RRA AV NY VA+G+S+SR K P E
Sbjct: 141 TDILIIGHTDNKGTAEYNQGLSERRAAAVKNYAVAQGLSSSRAKTEGKSFNEPIADNSTE 200
Query: 141 DAYAKNRRAIVFL 153
A+NRR + +
Sbjct: 201 AGRAQNRRVEIVI 213
>gi|312198597|ref|YP_004018658.1| OmpA/MotB domain protein [Frankia sp. EuI1c]
gi|311229933|gb|ADP82788.1| OmpA/MotB domain protein [Frankia sp. EuI1c]
Length = 371
Score = 74.5 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 53/142 (37%), Gaps = 1/142 (0%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNES-SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS 70
+ + G + D + +++ G V F + S + D L
Sbjct: 226 VVATAAAPGPRSPDAGAAGTGGAQGPGGDAAALAAAASGHPVTFASDSAVLSDRDRAALD 285
Query: 71 NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
+ + L L+ GH D G + + AL L RA A Y V++G+ A R++ YG
Sbjct: 286 LVAAALRAGTAPALVAGHTDSTGPASLNEALSLGRAQAAVGYLVSQGVPAGRLRAVGYGA 345
Query: 131 EMPSVYGHDEDAYAKNRRAIVF 152
P+ A NRR +
Sbjct: 346 SRPAADNATPAGRAANRRVEIV 367
>gi|312962248|ref|ZP_07776740.1| chemotaxis MotB protein [Pseudomonas fluorescens WH6]
gi|311283585|gb|EFQ62174.1| chemotaxis MotB protein [Pseudomonas fluorescens WH6]
Length = 295
Score = 74.5 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 19/115 (16%), Positives = 44/115 (38%), Gaps = 4/115 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ S+ F ++ ++ + + L+ + +EG D + ++
Sbjct: 130 VEIELNSSLLFASADAMPSDQAFTIIDKVAAILKPFENPVHVEGFTDNVPISTAQYPTNW 189
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L RA ++ +G+S R+ YG+ P + A+NRR ++ +
Sbjct: 190 ELSSARAASIVRMLAMQGVSPGRLASVGYGEFQPVANNATVEGRARNRRVVLVVS 244
>gi|307825940|ref|ZP_07656155.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
gi|307733059|gb|EFO03921.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
Length = 288
Score = 74.5 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 59/133 (44%), Gaps = 1/133 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFL 84
+ + + + + + ++ +V F S ++ P L ++ + D
Sbjct: 84 QQSLQGTGIEVQRTAENTLNLTMPSNVTFAFDSATLTPQAQGALDSVAKVLNQYPDSTIN 143
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+ GH D++GS + + L RRA +V +Y G++ SR+ G++MP V +E
Sbjct: 144 VTGHTDDVGSDSYNQVLSERRAASVSSYLAQHGVTPSRLTQQGMGEKMPKVPNVNEANRG 203
Query: 145 KNRRAIVFLKGCR 157
+NRR + + +
Sbjct: 204 QNRRVELAIVANK 216
>gi|239943905|ref|ZP_04695842.1| putative secreted protein [Streptomyces roseosporus NRRL 15998]
gi|239990359|ref|ZP_04711023.1| putative secreted protein [Streptomyces roseosporus NRRL 11379]
Length = 219
Score = 74.5 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 42/115 (36%), Gaps = 1/115 (0%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRN 96
++ V F S + A ++ + ++K + + G D LGS
Sbjct: 97 EDSNADIKFALQAEVLFGKDSAKLSSAANARIAAIAEEIKKQNATKIRVFGFTDNLGSSA 156
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
L +RA AV + ++ YG++ P +E+ KNRR V
Sbjct: 157 HGDVLSKQRADAVHGVLSKQLGPTVTYEIRGYGEQYPIASNSNEEGRKKNRRVEV 211
>gi|149277137|ref|ZP_01883279.1| outer membrane protein, OmpA family [Pedobacter sp. BAL39]
gi|149232014|gb|EDM37391.1| outer membrane protein, OmpA family [Pedobacter sp. BAL39]
Length = 280
Score = 74.5 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 7/116 (6%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRN-----SSI 99
S+ D + F + S I Q L+ L + ++ + + +EGH D N +
Sbjct: 153 VSMTDKLLFPSGSIVIDEKGKQALTQLATVLKQQPEINIAVEGHTDSQKITNLGQIKDNW 212
Query: 100 ALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L + R+ +V Y + + RM T G+ P V + + +KNRR + L
Sbjct: 213 DLSVLRSTSVVRYLTEVNKVESVRMTATGKGEFQPLVSNANAEGRSKNRRIEIVLS 268
>gi|59713685|ref|YP_206460.1| outer membrane protein [Vibrio fischeri ES114]
gi|59481933|gb|AAW87572.1| outer membrane protein [Vibrio fischeri ES114]
Length = 208
Score = 74.5 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 49/114 (42%), Gaps = 1/114 (0%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSI 99
+Q S+ + V F ++ + P +L+ + K + +++GH D G +
Sbjct: 90 NDQLVISIQEKVHFSSAKAELTPLARSLLNKLIVVMASKPELALVLDGHTDVTGDPIKNQ 149
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L +R+ V Y +A ++AS++ +G+ +P NRR + +
Sbjct: 150 NLSEQRSNEVRRYLLANKLNASQLYSRGFGEYLPLCDNDTILGRKCNRRVEITI 203
>gi|146277438|ref|YP_001167597.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
17025]
gi|145555679|gb|ABP70292.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17025]
Length = 367
Score = 74.5 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 5/128 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
+ ++ + + S+G F + S + V+S + + + + GH D
Sbjct: 236 AEGLVKVEQMDGKVFVSLGAGGSFTSGSDVLSEDARAVMSRIAEATQHPERTITVTGHTD 295
Query: 91 ELG----SRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ + +IAL RA +V VA G + R+ S G+ P E +
Sbjct: 296 NVPVAGGAFRDNIALAAGRAASVVRELVATGGVDPGRITAVSRGEFDPVADNATEAGRTQ 355
Query: 146 NRRAIVFL 153
NRR + +
Sbjct: 356 NRRIEIEI 363
>gi|170761206|ref|YP_001787972.1| chemotaxis motB protein [Clostridium botulinum A3 str. Loch Maree]
gi|169408195|gb|ACA56606.1| chemotaxis protein MotB [Clostridium botulinum A3 str. Loch Maree]
Length = 247
Score = 74.5 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 49/126 (38%), Gaps = 5/126 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ + + D+V F+ I+P Q++ + + + +IEGH D +
Sbjct: 112 SSVEVKEDGRGIIIQLRDNVLFEIGRADIKPQSKQIMDKINGLIATLPNEVIIEGHTDNV 171
Query: 93 GS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
S+ L RA V YFV + + R YG+ P + + AKNR
Sbjct: 172 PIKNEVYGSNWELSTARAVNVLRYFVETKKQNPVRFTAAGYGEYRPIAQNNSDANKAKNR 231
Query: 148 RAIVFL 153
R + +
Sbjct: 232 RVNIVI 237
>gi|254254076|ref|ZP_04947393.1| Outer membrane protein [Burkholderia dolosa AUO158]
gi|124898721|gb|EAY70564.1| Outer membrane protein [Burkholderia dolosa AUO158]
Length = 616
Score = 74.5 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 44/110 (40%), Gaps = 2/110 (1%)
Query: 46 SSVGDSVFFDTSSYSIRPADI-QVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLR 104
++ FD+ ++P ++ + ++ G+ D G+ +S++ L
Sbjct: 496 ITLDSMSLFDSGKAQLKPGSNRAMVRAIEMINAHPGKRIVVAGYTDNAGNPDSNLRLSRA 555
Query: 105 RAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA AV ++ + ++ + YG P D A+NRR + L
Sbjct: 556 RAQAVRDWLIDASGIPATQFAIQGYGDTRPIASNDAPDGRARNRRVEITL 605
>gi|254284085|ref|ZP_04959053.1| peptidoglycan-associated lipoprotein [gamma proteobacterium
NOR51-B]
gi|219680288|gb|EED36637.1| peptidoglycan-associated lipoprotein [gamma proteobacterium
NOR51-B]
Length = 180
Score = 74.5 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 23/172 (13%)
Query: 4 STIFIILSAITMMSISGIDNLDTKISSPDTVLNES-----------------------SL 40
+ + +++ + + SG D+ + + ++
Sbjct: 9 KLVAVSFASLILAACSGTDSKEQEAAAAAEAAAAEAAAQQAAAEAEAQAARAAAMAEQDR 68
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIA 100
+ + + G +F S + A + + L D +EGH DE G+R ++A
Sbjct: 69 LKDAAMAAGSVFYFAFDSSELNDASRMAIDAHIALLLVSDESIRLEGHTDERGTREYNLA 128
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
LG RRA AV +Y VA G+ + R++ SYG+E P +G E +++NRR +
Sbjct: 129 LGERRANAVRDYMVANGVPSYRIETISYGEENPIAFGSGEANWSENRRVELK 180
>gi|125974911|ref|YP_001038821.1| OmpA/MotB [Clostridium thermocellum ATCC 27405]
gi|281418623|ref|ZP_06249642.1| OmpA/MotB domain protein [Clostridium thermocellum JW20]
gi|125715136|gb|ABN53628.1| OmpA/MotB [Clostridium thermocellum ATCC 27405]
gi|281407707|gb|EFB37966.1| OmpA/MotB domain protein [Clostridium thermocellum JW20]
Length = 266
Score = 74.5 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 52/134 (38%), Gaps = 5/134 (3%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI 85
+ D + + + + + FD I+ + L +G+ +++ + + +I
Sbjct: 131 VEEMDLDEYVKVIEDDKSLTVRMNSVILFDLGKADIKEPGKETLRKIGTLIKQLNKNAVI 190
Query: 86 EGHADELGSRNS----SIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDE 140
+GH D L + L +RA V + V + ++ T G+ P E
Sbjct: 191 QGHTDNLPINTMLFPTNWELSTKRATNVVLFLVDECGVDPVKLTATGNGEFRPIAPNDTE 250
Query: 141 DAYAKNRRAIVFLK 154
+ KNRR + ++
Sbjct: 251 ENRQKNRRIDIVIE 264
>gi|330899454|gb|EGH30873.1| flagellar motor protein MotD [Pseudomonas syringae pv. japonica
str. M301072PT]
gi|330940674|gb|EGH43692.1| flagellar motor protein MotD [Pseudomonas syringae pv. pisi str.
1704B]
gi|330976021|gb|EGH76087.1| flagellar motor protein MotD [Pseudomonas syringae pv. aptata str.
DSM 50252]
Length = 295
Score = 74.5 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 19/127 (14%), Positives = 45/127 (35%), Gaps = 4/127 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ + + S+ F + ++ + +++ D +EG D+
Sbjct: 118 SDQMTVRGNELWIEIELNSSMLFGSGDAMPSDKAFTIIEKVAGIVKRFDNPIHVEGFTDD 177
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
++ L R+ ++ G++ +R+ YG+ P V AKNR
Sbjct: 178 QPISTAQFPTNWELSSARSASIVRMLAMDGVNPARLASVGYGEFQPIVPNTSTAGRAKNR 237
Query: 148 RAIVFLK 154
R ++ +
Sbjct: 238 RVVLVIS 244
>gi|313674153|ref|YP_004052149.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
gi|312940851|gb|ADR20041.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
Length = 485
Score = 74.5 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
+ +V+F S ++ +L + + ++EGH D +G + +I L RA
Sbjct: 377 INRNVYFKFDSDKLQGKFNSLLDKISEELEKNPQIKIMLEGHTDAIGGEDINIDLSCSRA 436
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE-DAYAKNRRAIVFL 153
V + + RGI+ R++++ GKE P DE + NRR +L
Sbjct: 437 NKVKDALIDRGINQYRIEISCEGKERPIATNDDEFEGRELNRRVEFYL 484
>gi|170756344|ref|YP_001782268.1| chemotaxis motB protein [Clostridium botulinum B1 str. Okra]
gi|169121556|gb|ACA45392.1| chemotaxis protein MotB [Clostridium botulinum B1 str. Okra]
Length = 247
Score = 74.5 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 49/126 (38%), Gaps = 5/126 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ + + D+V F+ I+P Q++ + + + +IEGH D +
Sbjct: 112 SSVEVKEDGRGIIIQLRDNVLFEIGRADIKPQSKQIMDKINGLIATLPNEVIIEGHTDNV 171
Query: 93 GS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
S+ L RA V YFV + + R YG+ P + + AKNR
Sbjct: 172 PIKNEVYGSNWELSTARAVNVLRYFVETKKQNPVRFTAAGYGEYRPIAQNNSDANKAKNR 231
Query: 148 RAIVFL 153
R + +
Sbjct: 232 RVNIVI 237
>gi|330009105|ref|ZP_08306392.1| OmpA family protein [Klebsiella sp. MS 92-3]
gi|328534943|gb|EGF61477.1| OmpA family protein [Klebsiella sp. MS 92-3]
Length = 567
Score = 74.5 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 51/126 (40%), Gaps = 2/126 (1%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGH 88
P+ + + S + FD ++ +VL N L + + ++ G+
Sbjct: 411 PPEKKRDVADALPVQSVRLDSMALFDVGQARLKDGSTKVLINALVNIRARPGWLIVVTGY 470
Query: 89 ADELGSRNSSIALGLRRAYAVFNY-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
D G++ ++ L LRRA AV ++ I A+ V G+ P+ + A NR
Sbjct: 471 TDTTGNKKANQQLSLRRAEAVRDWMLQTSDIPATCFAVQGLGESHPAATNDTPEGRAANR 530
Query: 148 RAIVFL 153
R + L
Sbjct: 531 RVEISL 536
>gi|330820746|ref|YP_004349608.1| putative outer membrane protein A precursor [Burkholderia gladioli
BSR3]
gi|327372741|gb|AEA64096.1| putative outer membrane protein A precursor [Burkholderia gladioli
BSR3]
Length = 222
Score = 74.5 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 55/135 (40%), Gaps = 3/135 (2%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL-GSWLEKH 79
K+ S + ++ E ++ V F + ++ P+ + L L ++
Sbjct: 89 CGAAPAKVESSNEPTPAVAVIEH--VNLSGDVLFASDHATLAPSARESLDQLLSERTDRV 146
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ + G+ D +GS ++ L RRA +V Y A G+ MKV+ GK P
Sbjct: 147 YSEVSVTGYTDSVGSDEYNLDLSKRRAESVAAYLSAHGLKTGSMKVSGRGKADPVASNMT 206
Query: 140 EDAYAKNRRAIVFLK 154
+ A NRR + L
Sbjct: 207 AEGRASNRRVEITLS 221
>gi|254848320|ref|ZP_05237670.1| lipoprotein [Vibrio cholerae MO10]
gi|254844025|gb|EET22439.1| lipoprotein [Vibrio cholerae MO10]
Length = 222
Score = 74.5 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSI 99
+ Q + + + F ++SY + + L + +E D +IEGH D GS ++
Sbjct: 105 ENQLMLRMENGIGFTSNSYQLDSYIHKTLRGVARILVEYPDTSLVIEGHTDSTGSDTTNQ 164
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L +RA +V ++ +++G++A R G+ P + + A NRR + +
Sbjct: 165 VLSEKRAESVRSFLLSQGVAAGRAIARGNGERFPLCSNNTAEGRACNRRVEIQI 218
>gi|194014658|ref|ZP_03053275.1| chemotaxis protein MotB (Motility protein B) [Bacillus pumilus ATCC
7061]
gi|194013684|gb|EDW23249.1| chemotaxis protein MotB (Motility protein B) [Bacillus pumilus ATCC
7061]
Length = 254
Score = 74.5 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 41/128 (32%), Gaps = 6/128 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
L E ++ DS+FFD+ IRP D+ + + L + ++ +
Sbjct: 119 GAKLETKLTDEGLLITIEDSIFFDSGRAIIRPQDVPLAKEISKLLVINPARDIVISGHTD 178
Query: 92 LGSRNSSIALGLRRAYAVFNY------FVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+S A+ ++ +G+ P + +K
Sbjct: 179 NVPIRNSEFESNWYLSAIRAVNFLSILLENSNLNQENFSTKGFGEFKPIASNDTAEGRSK 238
Query: 146 NRRAIVFL 153
NRR V +
Sbjct: 239 NRRVEVLI 246
>gi|59711322|ref|YP_204098.1| flagellar motor protein MotB [Vibrio fischeri ES114]
gi|197335182|ref|YP_002155478.1| flagellar motor protein [Vibrio fischeri MJ11]
gi|59479423|gb|AAW85210.1| flagellar motor protein MotB1 [Vibrio fischeri ES114]
gi|197316672|gb|ACH66119.1| flagellar motor protein [Vibrio fischeri MJ11]
Length = 309
Score = 74.5 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 47/128 (36%), Gaps = 5/128 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ + +L +Q + + F S ++P ++ + ++ + GH D
Sbjct: 167 EGAIEVENLGQQLVIRIREKGAFPAGSAFLQPKFRPLIRQIAELVKDVPGIIRVSGHTDN 226
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S+ L +RA +V +G + R++V P V + A+N
Sbjct: 227 QPLDSELYRSNWDLSAQRAVSVALEMERVKGFESDRLRVRGMASTEPLVSNKTAEGRARN 286
Query: 147 RRAIVFLK 154
RR + +
Sbjct: 287 RRVEISIM 294
>gi|300024878|ref|YP_003757489.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888]
gi|299526699|gb|ADJ25168.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888]
Length = 387
Score = 74.5 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F+ S +I PA LS L + L+ + G D +GS + L RA + ++
Sbjct: 284 FNEDSAAIAPASRTALSALVTALKACAGVVVEVRGFTDSVGSSEGNQMLSELRAKKIVDF 343
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
G+ AS++ G++ P + NRR L G
Sbjct: 344 LTKAGVEASKLTAVGKGEDDPVADNETPEGRRLNRRVEFVLSG 386
>gi|86740618|ref|YP_481018.1| OmpA/MotB [Frankia sp. CcI3]
gi|86567480|gb|ABD11289.1| OmpA/MotB [Frankia sp. CcI3]
Length = 363
Score = 74.5 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 51/132 (38%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
+ ++ + + +L ++ +V F + ++ P L + + L
Sbjct: 227 VPREKPAAAAAKSTSDAGALAALRAALDARNVTFPVGAATLSPPARLWLDRVAAALRAGR 286
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
L+ GHAD GS + AL L RA + +Y RG+ ++V +G P
Sbjct: 287 VVVLVGGHADASGSATLNQALSLDRAQVIADYLTDRGVRPDLIRVAGFGSRWPVADNATP 346
Query: 141 DAYAKNRRAIVF 152
A NRR +
Sbjct: 347 RGRAANRRVEIV 358
>gi|307312753|ref|ZP_07592383.1| OmpA/MotB domain protein [Escherichia coli W]
gi|306907188|gb|EFN37694.1| OmpA/MotB domain protein [Escherichia coli W]
gi|315062099|gb|ADT76426.1| Putative outer membrane protein/OmpA domain protein [Escherichia
coli W]
gi|323377319|gb|ADX49587.1| OmpA/MotB domain protein [Escherichia coli KO11]
Length = 550
Score = 74.5 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 49/126 (38%), Gaps = 2/126 (1%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVL-SNLGSWLEKHDCDFLIEGH 88
P+ + ++ + + + FD ++ +VL L + K L+ G+
Sbjct: 414 PPEQKMEVTASLQAQTVRLDSMSLFDVGQARLKDGSTKVLVDTLVNIRAKPGWLILVAGY 473
Query: 89 ADELGSRNSSIALGLRRAYAVFNY-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
D G S+ L LRRA AV N+ I A+ V G+ P+ A NR
Sbjct: 474 TDATGDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNR 533
Query: 148 RAIVFL 153
R + L
Sbjct: 534 RVEISL 539
>gi|84515980|ref|ZP_01003341.1| OmpA family protein [Loktanella vestfoldensis SKA53]
gi|84510422|gb|EAQ06878.1| OmpA family protein [Loktanella vestfoldensis SKA53]
Length = 218
Score = 74.5 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 40/111 (36%), Gaps = 1/111 (0%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALG 102
+ + F T+S I L + D + GH D +GS + + L
Sbjct: 105 LVVVLSQDLLFATNSTQIGAQSQNDLMIVARSLTNYPDSTINVIGHTDNVGSASFNQDLS 164
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RRA +V + G+S R++ G P + NRR + +
Sbjct: 165 ERRAQSVAGVLRSGGVSPGRVRSIGAGLYQPIASNATAEGRQLNRRVEIII 215
>gi|308048148|ref|YP_003911714.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
gi|307630338|gb|ADN74640.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
Length = 219
Score = 74.5 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHA 89
T ++ + + +S+ FD S ++ I LS + + E + + I GH
Sbjct: 92 AGTGVSVKRDGDHIQLVMPNSLTFDVGSDRLKMPAINALSGVAMVVSEFDETNLQITGHT 151
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G R+ ++ L RA AV + + + ISA+RM G + P E A+NRR
Sbjct: 152 DSTGGRDLNMRLSRERAEAVASELLRQSISATRMSTYGAGPDRPIASNQSEAGRAENRRV 211
Query: 150 IVFL 153
+ L
Sbjct: 212 EIVL 215
>gi|166714357|gb|ABY87945.1| outer membrane protein [Acinetobacter sp. bm-8]
Length = 355
Score = 74.5 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
VFFDT+ +I+ ++ + E + IEGH D G R + L L RA +V
Sbjct: 235 RVFFDTNKSNIKDQYKPEIAKVAEKLNEYPNATARIEGHTDNTGPRKLNERLSLARANSV 294
Query: 110 FNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
+ V+ I +SR+ + + P + ++ A NRR + G R
Sbjct: 295 KSALVSEYNIDSSRLAAQGFAWDQPIADNNTKEGRAMNRRVFATITGSR 343
>gi|193212308|ref|YP_001998261.1| peptidoglycan-associated lipoprotein [Chlorobaculum parvum NCIB
8327]
gi|193085785|gb|ACF11061.1| peptidoglycan-associated lipoprotein [Chlorobaculum parvum NCIB
8327]
Length = 108
Score = 74.5 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAV 109
+FFD I P L + W+ ++ + EGH DE G+ ++ALG RRA +
Sbjct: 4 DIFFDFDRSIITPESQAQLRDNAEWMAQNKSKSLVCEGHCDERGTAEYNMALGERRAESA 63
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
++ G+S R+ SYG+E P GHDE A+++NRR
Sbjct: 64 KESLMSLGVSGDRLSTISYGEEKPFAIGHDEAAWSQNRRVHFV 106
>gi|119472095|ref|ZP_01614326.1| flagellar motor protein MotB [Alteromonadales bacterium TW-7]
gi|119445115|gb|EAW26408.1| flagellar motor protein MotB [Alteromonadales bacterium TW-7]
Length = 306
Score = 74.5 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 55/132 (41%), Gaps = 5/132 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
D + SL +Q + ++ F + S ++P ++ ++G L+ + + GH D+
Sbjct: 166 DGAIELESLGQQIIIRIRENGSFPSGSAFLQPKFKPIIQDIGELLKDVPGEITVSGHTDD 225
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
++ L +RA AV + +G +RM V + P V + +N
Sbjct: 226 FQVSNELYVNNWDLSSKRAVAVASELQTVQGFDKTRMMVVGRAETRPLVPNETNEDRRRN 285
Query: 147 RRAIVFLKGCRA 158
RR + + +A
Sbjct: 286 RRVEISILQGKA 297
>gi|320093629|ref|ZP_08025513.1| photosystem I P700 chlorophyll a apoprotein A2 [Actinomyces sp.
oral taxon 178 str. F0338]
gi|319979417|gb|EFW10895.1| photosystem I P700 chlorophyll a apoprotein A2 [Actinomyces sp.
oral taxon 178 str. F0338]
Length = 402
Score = 74.5 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 48/130 (36%), Gaps = 8/130 (6%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHA 89
P S + ++ DSV FD ++R L+ L S L + GH
Sbjct: 271 PPVAGLAPSQSCGTAITLDDSVLFDFGESTVRADAADTLAKLASVLTDAGAPTAHVYGHT 330
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG------HDEDAY 143
D +G S+ L +RA AV + G + + + +G+ P +
Sbjct: 331 DSVGDDASNQTLSEQRAKAVVDELKKNGATTA-LDWKGFGETQPIAPNTNDDGSDNPAGR 389
Query: 144 AKNRRAIVFL 153
NRR +++
Sbjct: 390 QANRRVEIYI 399
>gi|302878485|ref|YP_003847049.1| OmpA/MotB domain-containing protein [Gallionella capsiferriformans
ES-2]
gi|302581274|gb|ADL55285.1| OmpA/MotB domain protein [Gallionella capsiferriformans ES-2]
Length = 347
Score = 74.5 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 60/138 (43%), Gaps = 4/138 (2%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDC 81
K + + E ++ ++ + F DTSS I+PA + L+ + + + +
Sbjct: 205 KEAAKPVAVAPKIVEKTIFTDKPVTIEGANF-DTSSAKIKPAADKKLNEVVDFAAKYKES 263
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
+ I GH D GS + L L RA +V Y V +G+SA+R+ P +
Sbjct: 264 NLAISGHTDSRGSEKLNQKLSLSRAESVKAYLVKKGVSAARITTKGEASTRPVADNKTKA 323
Query: 142 AYAKNRRAIV--FLKGCR 157
A+NRR + ++ +
Sbjct: 324 GRAQNRRVEINSVVRESK 341
>gi|332161223|ref|YP_004297800.1| putative OmpA family protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|318605118|emb|CBY26616.1| outer membrane protein ImpK/VasF, OmpA/MotB domain [Yersinia
enterocolitica subsp. palearctica Y11]
gi|325665453|gb|ADZ42097.1| putative OmpA family protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330860429|emb|CBX70737.1| hypothetical protein YEW_EP20110 [Yersinia enterocolitica W22703]
Length = 458
Score = 74.5 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 41/123 (33%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
++ F S +RP + V+ + + + LI GH D +
Sbjct: 334 VSVDETSSHSKVIFKGDTMFQVGSDKVRPEIMSVIERVAQEVHRVQGAVLIIGHTDSMPI 393
Query: 95 RNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
L +RA V + GI +++ G P D ++NRR
Sbjct: 394 NKPGFPNNQVLSEKRAANVARFMEKAGIPTDKIQFEGKGDTQPVSSNDDAAGRSQNRRVE 453
Query: 151 VFL 153
+F+
Sbjct: 454 IFV 456
>gi|262172094|ref|ZP_06039772.1| Flagellar motor rotation protein MotB [Vibrio mimicus MB-451]
gi|261893170|gb|EEY39156.1| Flagellar motor rotation protein MotB [Vibrio mimicus MB-451]
Length = 279
Score = 74.5 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 43/127 (33%), Gaps = 5/127 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ +L +Q + + F S ++P ++ + ++ + GH D
Sbjct: 133 QGAIEVENLGQQIDIRIREKGAFPEGSAFLQPKFRPLVRQIADLVKDIPGKVRVTGHTDN 192
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S+ L +RA +V +G R++V P E A N
Sbjct: 193 QKLDSELYRSNWDLSAQRAVSVAQEMEKVKGFDHQRLQVRGMADTQPIGPNDTEAQRALN 252
Query: 147 RRAIVFL 153
RR + +
Sbjct: 253 RRVEISI 259
>gi|126440077|ref|YP_001060632.1| ompA family protein [Burkholderia pseudomallei 668]
gi|126219570|gb|ABN83076.1| ompA family protein [Burkholderia pseudomallei 668]
Length = 310
Score = 74.5 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++ F+T S ++ P +L + + + I GH D G+R S+IAL RA
Sbjct: 203 NRTIEFETGSATLTPQGRAILDQMAGALAKMSNRTVEIIGHTDNSGNRTSNIALSQARAD 262
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
AV Y V +GI++ ++ T G + P D A+NRR
Sbjct: 263 AVKGYLVTKGIASQQLTTTGVGPDQPIAPNDSADGRARNRRIEF 306
>gi|302381881|ref|YP_003817704.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
gi|302192509|gb|ADL00081.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
Length = 224
Score = 74.5 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADELGSRNSSIA 100
+ + V F + +I P VLS++ L+++D + I GH D G +
Sbjct: 107 DNLVLRMPSDVTFAVNQSNIEPRFDAVLSDVAGVLQEYDRSVVDIVGHTDSSGGDAINQP 166
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L RRA +V + +ARG+ R+ V +P + A+NRR + ++
Sbjct: 167 LSERRALSVADALIARGVIRERLFVAGQSSRVPVASNATPEGRAQNRRVEILIR 220
>gi|167571440|ref|ZP_02364314.1| ompA family protein [Burkholderia oklahomensis C6786]
Length = 308
Score = 74.5 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAY 107
++ F+T S ++ P +L + L K I GH D G+R S+IAL RA
Sbjct: 201 NRTIEFETGSATLTPQGRAILDQMAGALAKMSSRTVEIIGHTDNSGNRASNIALSQARAD 260
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
AV Y VA+GI++ ++ T G + P D A+NRR
Sbjct: 261 AVKGYLVAKGIASQQLTTTGVGPDQPIASNDTNDGRARNRRIEF 304
>gi|330953776|gb|EGH54036.1| flagellar motor protein MotD [Pseudomonas syringae Cit 7]
Length = 295
Score = 74.5 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 18/127 (14%), Positives = 44/127 (34%), Gaps = 4/127 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ + + S+ F + ++ + +++ D +EG D+
Sbjct: 118 SDQMTVRGNELWIEIELNSSMLFGSGDAMPSDKAFTIIEKVAGIVKRFDNPIHVEGFTDD 177
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
++ L R+ ++ G++ +R+ YG+ P AKNR
Sbjct: 178 QPISTAQFPTNWELSSARSASIVRMLAMDGVNPARLASVGYGEFQPIAPNTSTVGRAKNR 237
Query: 148 RAIVFLK 154
R ++ +
Sbjct: 238 RVVLVIS 244
>gi|307637795|gb|ADN80245.1| peptidoglycan associated lipoprotein precursor [Helicobacter pylori
908]
gi|325996393|gb|ADZ51798.1| peptidoglycan associated lipoprotein precursor [Helicobacter pylori
2018]
gi|325997981|gb|ADZ50189.1| putative peptidoglycan associated lipoprotein [Helicobacter pylori
2017]
Length = 152
Score = 74.5 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 62/139 (44%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
++ + + + S ++ S++FD Y I+ +D + L +
Sbjct: 12 TAPVTTEPAPEKEEPKQEPAPVVEEKPAIESGTIIASIYFDFDKYEIKESDQETLDEIVQ 71
Query: 75 WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
+++ L+EG+ DE GS + ALG++R +V N V +G+ +K S+G+ P
Sbjct: 72 KAKENHMQVLLEGNTDEFGSSEYNQALGVKRTLSVKNALVIKGVEKDMIKTISFGETKPK 131
Query: 135 VYGHDEDAYAKNRRAIVFL 153
+ Y +NRR V L
Sbjct: 132 CVQKTRECYRENRRVDVKL 150
>gi|241662342|ref|YP_002980702.1| peptidoglycan-associated lipoprotein [Ralstonia pickettii 12D]
gi|240864369|gb|ACS62030.1| peptidoglycan-associated lipoprotein [Ralstonia pickettii 12D]
Length = 173
Score = 74.5 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 45/129 (34%), Positives = 70/129 (54%), Gaps = 2/129 (1%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDF 83
D + +P V + + S S++FD SYS++P +L +L+ H
Sbjct: 45 DARTVTPVDVGRDELT-DPNSPLAKRSIYFDFDSYSVKPEYQGLLGQHSRYLQSHNQRKV 103
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
LI+G+ DE G+ ++ALG +RA AV + G+ S+M+ S GKE P GHDED++
Sbjct: 104 LIQGNTDERGTSEYNLALGQKRAEAVRRALSSMGVPDSQMEAVSLGKEKPQATGHDEDSW 163
Query: 144 AKNRRAIVF 152
A+NRRA +
Sbjct: 164 AQNRRADIV 172
>gi|329943863|ref|ZP_08292134.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386]
gi|328531569|gb|EGF58405.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386]
Length = 384
Score = 74.1 bits (180), Expect = 5e-12, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 53/150 (35%), Gaps = 3/150 (2%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
++ ++ + D + + + + ++ V F + S + PA L +
Sbjct: 180 AATELAAPVAIERYTRALDDSTSTHTGGQDITVTLASDVTFASDSADLTPAADTQLQTVA 239
Query: 74 SWLEKHD--CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGK 130
L ++ I GH D++ + L +RA AV + T G+
Sbjct: 240 DQLNQYPDGGTLSIVGHTDDIQDDAYNQPLSEKRANAVKDRLQQLTTLDKWSPTTTGKGE 299
Query: 131 EMPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
P V ++A A NRR + L T
Sbjct: 300 SEPRVKETTDEARAANRRVEITLTPTGGTT 329
>gi|229827389|ref|ZP_04453458.1| hypothetical protein GCWU000182_02777 [Abiotrophia defectiva ATCC
49176]
gi|229788327|gb|EEP24441.1| hypothetical protein GCWU000182_02777 [Abiotrophia defectiva ATCC
49176]
Length = 305
Score = 74.1 bits (180), Expect = 5e-12, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 45/122 (36%), Gaps = 7/122 (5%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELG---- 93
+ S+ FD+ S ++ +VL ++ D D +IEGH D +
Sbjct: 178 TSYNYIGLSIDGYFLFDSGSAELKKGADKVLDKAAGILMKFKDADIVIEGHTDNVPQTNT 237
Query: 94 -SRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+++ L RA V Y + ++ + G+ P + KNRR +
Sbjct: 238 VKYKNNLWLSGARAMTVLEYLTEVEHMDPKKLSASGKGEYEPIASNKTAEGRQKNRRVEI 297
Query: 152 FL 153
+
Sbjct: 298 KI 299
>gi|183222583|ref|YP_001840579.1| putative outer-membrane protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189912618|ref|YP_001964173.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167777294|gb|ABZ95595.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167781005|gb|ABZ99303.1| Putative outer-membrane protein; putative signal peptide
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 670
Score = 74.1 bits (180), Expect = 5e-12, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSI 99
+ F ++F + ++ D + L L + + + I GH D +G++ +I
Sbjct: 555 VKDFDDLYNTIIYFPFNERTLSDEDKKKLDLLADFLIHHKNEKVEIGGHTDNIGNKEYNI 614
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
L RA +V+ Y +G+ RMKV +Y P E+ ++NRR
Sbjct: 615 NLSEDRALSVYQYLRLKGVPKERMKVQAYHYSQPIADNETEEGRSRNRRV 664
>gi|163866828|gb|ABY47584.1| outer membrane protein A [Acinetobacter baumannii]
Length = 333
Score = 74.1 bits (180), Expect = 5e-12, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 53/133 (39%), Gaps = 5/133 (3%)
Query: 20 GIDNLDTKISSPDTVLNESS-LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LE 77
++ P V + L E + + VFFDT+ +I+ ++ + E
Sbjct: 198 AAPVVEVAPVEPTPVAPQPQELTEDLNMEL--RVFFDTNKSNIKDQYKPEIAKVAEKLSE 255
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVY 136
+ IEGH D G R + L L RA +V + V + ASR+ + + P
Sbjct: 256 YPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIAD 315
Query: 137 GHDEDAYAKNRRA 149
++ A NRR
Sbjct: 316 NKTKEGRAMNRRV 328
>gi|320531900|ref|ZP_08032811.1| OmpA family protein [Actinomyces sp. oral taxon 171 str. F0337]
gi|320135891|gb|EFW27928.1| OmpA family protein [Actinomyces sp. oral taxon 171 str. F0337]
Length = 332
Score = 74.1 bits (180), Expect = 5e-12, Method: Composition-based stats.
Identities = 30/142 (21%), Positives = 57/142 (40%), Gaps = 3/142 (2%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+G ++T + D + ++ + +V V F T S + VL+++ ++K
Sbjct: 15 AGPFKIETMSLAADDSSDTKQDEKSTTVTVAGDVTFATDSDQLSAQADSVLASVVEQIKK 74
Query: 79 HDC--DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSV 135
+ D I GH D++ + L RRA AV ++ V+ G+ P V
Sbjct: 75 YPSGGDLTITGHTDDVADDAHNQDLSERRAKAVSERLKKLTDLSTWKESVSGKGESSPRV 134
Query: 136 YGHDEDAYAKNRRAIVFLKGCR 157
++ NRR + L +
Sbjct: 135 PNDTDERRQINRRVEITLTPSK 156
>gi|261417272|ref|YP_003250955.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261373728|gb|ACX76473.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 294
Score = 74.1 bits (180), Expect = 5e-12, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 2/139 (1%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
+ S + +D + ++ + S+ D + FD +++ + L+ +
Sbjct: 149 LEASKNEAMDKLNALQSQMIQVTKDARGIILSMSD-ILFDVGRATLKTDLMTSLAKIAGI 207
Query: 76 LE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
L D IEG+ D GS ++ L +RA V + V +GI+ +R+ G MP
Sbjct: 208 LSVYQQFDVSIEGNTDNTGSEEFNMTLSQQRAENVMKFLVEQGIAETRLTAKGLGMTMPI 267
Query: 135 VYGHDEDAYAKNRRAIVFL 153
++ KNRR + +
Sbjct: 268 ADNSTKEGRQKNRRVDLVI 286
>gi|77457447|ref|YP_346952.1| OmpA/MotB [Pseudomonas fluorescens Pf0-1]
gi|77381450|gb|ABA72963.1| putative outer membrane protein A precursor [Pseudomonas
fluorescens Pf0-1]
Length = 231
Score = 74.1 bits (180), Expect = 5e-12, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 54/133 (40%), Gaps = 3/133 (2%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH--DC 81
D + E ++ + + V V F ++ PAD VL + S L++
Sbjct: 97 ADGCPPPAPAPVVEEAVVVKEETIVIRDVHFQFDKATLTPADKLVLDKVASRLKQESSTA 156
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDE 140
+ GH D +GS + L RRA++V Y V +S + VT G+ P
Sbjct: 157 QLTVTGHTDSVGSDAYNQKLSDRRAHSVVKYLVESGVPQSSFVSVTGAGESQPVADNKTA 216
Query: 141 DAYAKNRRAIVFL 153
D A NRR + +
Sbjct: 217 DGRALNRRTEIKI 229
>gi|126453039|ref|YP_001067883.1| ompA family protein [Burkholderia pseudomallei 1106a]
gi|242315370|ref|ZP_04814386.1| ompA family protein [Burkholderia pseudomallei 1106b]
gi|254198619|ref|ZP_04905040.1| ompA family protein [Burkholderia pseudomallei S13]
gi|126226681|gb|ABN90221.1| ompA family protein [Burkholderia pseudomallei 1106a]
gi|169655359|gb|EDS88052.1| ompA family protein [Burkholderia pseudomallei S13]
gi|242138609|gb|EES25011.1| ompA family protein [Burkholderia pseudomallei 1106b]
Length = 310
Score = 74.1 bits (180), Expect = 5e-12, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++ F+T S ++ P +L + + + I GH D G+R S+IAL RA
Sbjct: 203 NRTIEFETGSATLTPQGRAILDQMAGALAKMSNRTVEIIGHTDNSGNRTSNIALSQARAD 262
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
AV Y V +GI++ ++ T G + P D A+NRR
Sbjct: 263 AVKGYLVTKGIASQQLTTTGVGPDQPIAPNDSADGRARNRRIEF 306
>gi|163857259|ref|YP_001631557.1| OmpA-family protein [Bordetella petrii DSM 12804]
gi|163260987|emb|CAP43289.1| OmpA-family protein [Bordetella petrii]
Length = 334
Score = 74.1 bits (180), Expect = 5e-12, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 47/131 (35%), Gaps = 5/131 (3%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEG 87
++ ++ S + + + F + + PA + ++S + +EG
Sbjct: 192 DDLGDGVDVIVNEKSISFRISNELLFPSGQAVLSPAGLGLISRMAKVINRSQGYPVSVEG 251
Query: 88 HADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
H+D + S+ L RA +V V G+ R++ Y P
Sbjct: 252 HSDPVPIQTRQFPSNWELSAGRATSVLRELVRDGVDPGRLRAVGYADTHPIASNDTPQGR 311
Query: 144 AKNRRAIVFLK 154
A NRR + ++
Sbjct: 312 AANRRVELIME 322
>gi|146344294|ref|YP_001202150.1| hypothetical protein pQBR0404 [Pseudomonas fluorescens SBW25]
gi|146188106|emb|CAM96436.1| hypothetical protein pQBR0404 [Pseudomonas fluorescens SBW25]
Length = 220
Score = 74.1 bits (180), Expect = 5e-12, Method: Composition-based stats.
Identities = 38/130 (29%), Positives = 56/130 (43%), Gaps = 1/130 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFL 84
K T L+ + ++ + + F T+S ++PA Q LS + + L+ D
Sbjct: 89 QKGMDATTSLDPVTGRQMMTIEAPADIAFATASADLQPAAFQGLSAIATALKDQKDLRLE 148
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
I GH D GSR + L RA AV Y A G+ A + V G MP A
Sbjct: 149 ITGHTDGTGSRQFNNVLSYARAQAVAQYLYAAGVPAQVIAVRGVGPSMPVATDATTQGRA 208
Query: 145 KNRRAIVFLK 154
+NRR + +K
Sbjct: 209 QNRRVEIQIK 218
>gi|145219523|ref|YP_001130232.1| OmpA/MotB domain-containing protein [Prosthecochloris vibrioformis
DSM 265]
gi|145205687|gb|ABP36730.1| OmpA/MotB domain protein [Chlorobium phaeovibrioides DSM 265]
Length = 229
Score = 74.1 bits (180), Expect = 5e-12, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 49/134 (36%), Gaps = 1/134 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
D +I S + E + F T S ++ + L +
Sbjct: 80 DKQAEEIDSQVEGARVERVGESIRVVFDSGILFSTGSSTLTSTSRYNIEKLARILNRYSN 139
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ +IEGH D +G+ + + L RRA +V N G+S R+ YG+ P E
Sbjct: 140 TNLVIEGHTDAIGAESLNQTLSERRAESVANLLAGYGVSRYRLSPVGYGETRPIASNETE 199
Query: 141 DAYAKNRRAIVFLK 154
NRR V +
Sbjct: 200 YGRRLNRRVEVLIS 213
>gi|115372711|ref|ZP_01460017.1| thrombospondin type 3 repeat family [Stigmatella aurantiaca DW4/3-1]
gi|310823482|ref|YP_003955840.1| thrombospondin type 3 repeat protein, outer membrane
domain-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|115370192|gb|EAU69121.1| thrombospondin type 3 repeat family [Stigmatella aurantiaca DW4/3-1]
gi|309396554|gb|ADO74013.1| Thrombospondin type 3 repeat protein, outer membrane domain protein
[Stigmatella aurantiaca DW4/3-1]
Length = 5149
Score = 74.1 bits (180), Expect = 5e-12, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 55/149 (36%), Gaps = 11/149 (7%)
Query: 20 GIDNLDTKISSPDTVLNESS---------LQEQFSSSVGDSVFFDTSSYSIRPADIQVLS 70
D + + + V +E L E+ + D +FF + I P +L
Sbjct: 4992 ASDKCPNQPETINGVTDEDGCPDKGKVKVLVEREKIVILDKIFFTSKMDVILPKSFSLLK 5051
Query: 71 NLGSWLEKHDC--DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
+ L+ H +EG+ D+ G ++ L RRA AV V G++A R+ +
Sbjct: 5052 QVAQVLKAHPEIEKVRVEGYTDDQGPDEENLRLSERRAKAVLERLVQEGVAAERLDSVGF 5111
Query: 129 GKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
G+ P NRR + +
Sbjct: 5112 GEARPVASNKTSKGRDANRRVEFSVVKVK 5140
>gi|45655964|ref|YP_000050.1| peptidoglycan-associated cytoplasmic membrane protein [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
gi|45599197|gb|AAS68687.1| peptidoglycan-associated cytoplasmic membrane protein [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
Length = 687
Score = 74.1 bits (180), Expect = 5e-12, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 60/142 (42%), Gaps = 2/142 (1%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD-SVFFDTSSYSIRPADIQV 68
L A IS N+ K S + + E V + V+F+ + I + ++
Sbjct: 541 LFATASKYISESINIIQKNISKNGTVTIYLKAESDVDPVYNLRVYFEFNKTKITEENKKL 600
Query: 69 LSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
L L +L + I GH D + S+ + L +RA V+ Y +++GI RM++ +
Sbjct: 601 LDPLVGYLLKNASDKIEIGGHTDNVASKEYNTRLSAKRARNVYEYLLSKGIPEKRMRIRA 660
Query: 128 YGKEMPSVYGHDEDAYAKNRRA 149
Y P E AKNRR
Sbjct: 661 YWYSQPDADNETETGRAKNRRV 682
>gi|24212756|ref|NP_710237.1| OmpA family protein [Leptospira interrogans serovar Lai str. 56601]
gi|24193397|gb|AAN47255.1| OmpA family protein [Leptospira interrogans serovar Lai str. 56601]
Length = 687
Score = 74.1 bits (180), Expect = 5e-12, Method: Composition-based stats.
Identities = 37/142 (26%), Positives = 60/142 (42%), Gaps = 2/142 (1%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD-SVFFDTSSYSIRPADIQV 68
L A IS N+ K S + + E V + V+F+ + I + ++
Sbjct: 541 LFATASKYISESINIIQKNISKNGTVTIYLKAESDVDPVYNLRVYFEFNKTKITEENKKL 600
Query: 69 LSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
L L +L + I GH D + S+ + L +RA V+ Y +++GI RM++ +
Sbjct: 601 LDPLVGYLLKNASDKIEIGGHTDNVASKEYNTRLSAKRARNVYEYLLSKGIPEKRMRIRA 660
Query: 128 YGKEMPSVYGHDEDAYAKNRRA 149
Y P E AKNRR
Sbjct: 661 YWYSQPDADNETETGRAKNRRV 682
>gi|224370138|ref|YP_002604302.1| Pal [Desulfobacterium autotrophicum HRM2]
gi|223692855|gb|ACN16138.1| Pal [Desulfobacterium autotrophicum HRM2]
Length = 197
Score = 74.1 bits (180), Expect = 5e-12, Method: Composition-based stats.
Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++ F S + P +L W E ++EGH D+ G+ ++ALG RRA+
Sbjct: 91 NQNIHFAYDSADLTPMSRTLLKEKALWLGENPGVMVVVEGHCDDRGTMEYNLALGDRRAF 150
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ + GI+ SR+ SYG+E P ++E A+AKNRRA +K
Sbjct: 151 SAKKFLTDLGIAESRLSTISYGEERPIDPANNETAWAKNRRAQFVIK 197
>gi|134283190|ref|ZP_01769891.1| ompA family protein [Burkholderia pseudomallei 305]
gi|134245385|gb|EBA45478.1| ompA family protein [Burkholderia pseudomallei 305]
Length = 312
Score = 74.1 bits (180), Expect = 5e-12, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAY 107
++ F+T S ++ P +L + L K I GH D G+R S+IAL RA
Sbjct: 205 NRTIEFETGSATLTPQGRAILDQMAGALAKMSSRTVEIIGHTDNSGNRTSNIALSQARAD 264
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
AV Y V +GI++ ++ T G + P D A+NRR
Sbjct: 265 AVKGYLVTKGIASQQLTTTGVGPDQPIAPNDSADGRARNRRIEF 308
>gi|300855151|ref|YP_003780135.1| putative flagellar motor protein MotB [Clostridium ljungdahlii DSM
13528]
gi|300435266|gb|ADK15033.1| predicted flagellar motor protein MotB [Clostridium ljungdahlii DSM
13528]
Length = 249
Score = 74.1 bits (180), Expect = 5e-12, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 57/135 (42%), Gaps = 5/135 (3%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF 83
K D + ++ S+ +++ F++ + +L ++ + D +
Sbjct: 104 AKIKQDGYDDKVKVEISKDGLGISIQEAILFNSGDAEVLTHIHPLLISISEMIRNLDNNI 163
Query: 84 LIEGHADELGSRNS----SIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGH 138
I GH D + NS + L RA V N+ V G I+ +++ + +Y + P
Sbjct: 164 RIAGHTDNVPIHNSKFRSNWDLSAMRAINVMNFMVKNGGINITKVSIQAYSEYQPKSTNL 223
Query: 139 DEDAYAKNRRAIVFL 153
++ A+NRR +F+
Sbjct: 224 TKEGRAQNRRVEIFI 238
>gi|262402758|ref|ZP_06079319.1| Flagellar motor rotation protein MotB [Vibrio sp. RC586]
gi|262351540|gb|EEZ00673.1| Flagellar motor rotation protein MotB [Vibrio sp. RC586]
Length = 304
Score = 74.1 bits (180), Expect = 5e-12, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 43/127 (33%), Gaps = 5/127 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ +L +Q + + F S ++P ++ + ++ + GH D
Sbjct: 158 QGAIEVENLGQQIDIRIREKGAFPEGSAFLQPKFRPLVRQIADLVKDIPGKVRVTGHTDN 217
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S+ L +RA +V +G R++V P E A N
Sbjct: 218 QKLDSELYRSNWDLSAQRAVSVAQEMEKVKGFDHQRLQVRGMADTQPLGPNDTEAQRALN 277
Query: 147 RRAIVFL 153
RR + +
Sbjct: 278 RRVEISI 284
>gi|116623978|ref|YP_826134.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116227140|gb|ABJ85849.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076]
Length = 388
Score = 74.1 bits (180), Expect = 5e-12, Method: Composition-based stats.
Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYA 108
D + FD+ S +++PA L+N+ + L I G+ D +GS S++ L RA +
Sbjct: 282 DQIAFDSGSATLKPASQTQLNNIATVLNNCPGVRLDIAGYTDNVGSAESNLRLSRNRANS 341
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
V V G+ R YG+E P E A+NRR
Sbjct: 342 VVAVLVKEGVPRERFNAEGYGEEDPVADNSIEQGRAQNRRV 382
>gi|76809643|ref|YP_335000.1| OmpA family domain-containing protein [Burkholderia pseudomallei
1710b]
gi|226198194|ref|ZP_03793765.1| ompA family protein [Burkholderia pseudomallei Pakistan 9]
gi|254190435|ref|ZP_04896943.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237]
gi|254259878|ref|ZP_04950932.1| ompA family protein [Burkholderia pseudomallei 1710a]
gi|254300689|ref|ZP_04968134.1| ompA family protein [Burkholderia pseudomallei 406e]
gi|76579096|gb|ABA48571.1| OmpA family domain protein [Burkholderia pseudomallei 1710b]
gi|157810473|gb|EDO87643.1| ompA family protein [Burkholderia pseudomallei 406e]
gi|157938111|gb|EDO93781.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237]
gi|225929714|gb|EEH25730.1| ompA family protein [Burkholderia pseudomallei Pakistan 9]
gi|254218567|gb|EET07951.1| ompA family protein [Burkholderia pseudomallei 1710a]
Length = 310
Score = 74.1 bits (180), Expect = 5e-12, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAY 107
++ F+T S ++ P +L + L K I GH D G+R S+IAL RA
Sbjct: 203 NRTIEFETGSATLTPQGRAILDQMAGALAKMSSRTVEIIGHTDNSGNRTSNIALSQARAD 262
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
AV Y V +GI++ ++ T G + P D A+NRR
Sbjct: 263 AVKGYLVTKGIASQQLTTTGVGPDQPIAPNDSADGRARNRRIEF 306
>gi|113971062|ref|YP_734855.1| flagellar motor protein MotB [Shewanella sp. MR-4]
gi|114048292|ref|YP_738842.1| flagellar motor protein MotB [Shewanella sp. MR-7]
gi|117921338|ref|YP_870530.1| flagellar motor protein MotB [Shewanella sp. ANA-3]
gi|113885746|gb|ABI39798.1| OmpA/MotB domain protein [Shewanella sp. MR-4]
gi|113889734|gb|ABI43785.1| OmpA/MotB domain protein [Shewanella sp. MR-7]
gi|117613670|gb|ABK49124.1| OmpA/MotB domain protein [Shewanella sp. ANA-3]
Length = 306
Score = 74.1 bits (180), Expect = 5e-12, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 57/133 (42%), Gaps = 5/133 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
D + SL +Q + + F + S ++P V+ ++G L+ + G+ D
Sbjct: 164 TDGAIEIESLGQQIIIRIREKGSFASGSGFLQPRFKPVVRSVGELLKDVPGIITVSGYTD 223
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
++ +S+ L +RA AV + + +G RMKV P V + A+
Sbjct: 224 DMQISDELYSSNWDLSSKRAVAVADVLLQVKGFDPKRMKVVGMASNNPIVPNDSPENRAR 283
Query: 146 NRRAIVFLKGCRA 158
NRR + ++ +A
Sbjct: 284 NRRVEIAIEQGKA 296
>gi|270264140|ref|ZP_06192407.1| hypothetical protein SOD_g00710 [Serratia odorifera 4Rx13]
gi|270041789|gb|EFA14886.1| hypothetical protein SOD_g00710 [Serratia odorifera 4Rx13]
Length = 219
Score = 74.1 bits (180), Expect = 5e-12, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 64/124 (51%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD+SS +++PA L+ + L+++ + G+ D
Sbjct: 93 GTGVSVTRQGDNIVLNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTD 152
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GSR ++ L +RA V + + +G++A+R++ + G + P + A+NRR
Sbjct: 153 SSGSRALNMTLSQQRADGVGSALITQGVAANRIRTSGAGPDNPIASNSTAEGKAQNRRVE 212
Query: 151 VFLK 154
+ L
Sbjct: 213 ITLS 216
>gi|317152528|ref|YP_004120576.1| OmpA/MotB domain-containing protein [Desulfovibrio aespoeensis
Aspo-2]
gi|316942779|gb|ADU61830.1| OmpA/MotB domain protein [Desulfovibrio aespoeensis Aspo-2]
Length = 352
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 48/128 (37%), Gaps = 1/128 (0%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDF 83
+P + + ++ S+ F Y I I VL E +
Sbjct: 222 SNVADAPVVTPVAAPVDTMGKETITFSLHFGFDKYQITDEMIPVLEQAKIILDENPSASY 281
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
+I GH D G + L RRA +V + VA G++ SR++ YG+ P +
Sbjct: 282 IIAGHTDSTGPDAYNQGLSERRAGSVREWMVANGVNTSRLESKGYGELSPKYDNATSEGR 341
Query: 144 AKNRRAIV 151
NRR +
Sbjct: 342 KLNRRVEI 349
>gi|152996565|ref|YP_001341400.1| OmpA/MotB domain-containing protein [Marinomonas sp. MWYL1]
gi|150837489|gb|ABR71465.1| OmpA/MotB domain protein [Marinomonas sp. MWYL1]
Length = 209
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 4/130 (3%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFL 84
T+ ++ D + + S + + FDT I+ L +L +L++H +
Sbjct: 54 TEGAAVDNYGCPNQTTKLLSVELN--ILFDTGKADIKQRFYSELKDLAKFLKEHPASTVV 111
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAY 143
IEGH D GS + L +RA A+ + + I A R+K YG P ED
Sbjct: 112 IEGHTDSQGSAELNQELSQQRASAIADVLVDSFRIQADRVKGIGYGATRPIADNDTEDGR 171
Query: 144 AKNRRAIVFL 153
NRR + +
Sbjct: 172 KLNRRVVAEV 181
>gi|296410000|gb|ADH15776.1| OmpP6 [Haemophilus haemolyticus]
Length = 137
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 1/137 (0%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS- 70
A ++ +++ + + + ++V+F Y+I +Q+L
Sbjct: 1 AGSVAALAACSSSNNDAAGNGAGQTFGGYSVSDLQQRYNTVYFGFDKYNIEGEYVQILDA 60
Query: 71 NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
+ L+EG+ DE G+ +IALG RRA AV Y +G+ A ++ SYG+
Sbjct: 61 HAAYLNATPAAKVLVEGNTDERGTPEYNIALGQRRADAVKGYLAGKGVDAGKLGTVSYGE 120
Query: 131 EMPSVYGHDEDAYAKNR 147
E P+V GHDE AY+KNR
Sbjct: 121 EKPAVLGHDEAAYSKNR 137
>gi|258545746|ref|ZP_05705980.1| peptidoglycan-associated lipoprotein [Cardiobacterium hominis ATCC
15826]
gi|258518991|gb|EEV87850.1| peptidoglycan-associated lipoprotein [Cardiobacterium hominis ATCC
15826]
Length = 189
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 45/122 (36%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHAD 90
D + + S+ ++F S +I V+ +L H ++EGH D
Sbjct: 67 DPQYGVNVVGGPQSADKDRIIYFSYDSSAIDSRSEAVIREHAKYLRAHPQTRVVLEGHTD 126
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
E G+R +I LG RRAY+V FVA GIS +M+V SYG+E P+ +G E+ YAKNRRA+
Sbjct: 127 ERGTREYNIGLGERRAYSVKERFVAAGISPQQMRVLSYGEERPAAFGSSEEDYAKNRRAV 186
Query: 151 VF 152
+
Sbjct: 187 IV 188
>gi|256422985|ref|YP_003123638.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
gi|256037893|gb|ACU61437.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
Length = 1026
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 1/104 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAV 109
++ F ++ I + + L + + L+ H L+ GH D G+ + L +R+ AV
Sbjct: 917 NLQFASAKAEIAVSSLPSLDKMAALLQAHREWQLLLSGHTDNEGTETFNQTLSEKRSEAV 976
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
Y V +G+ A R+ YG+ P E KNRR + +
Sbjct: 977 RQYLVTKGVDAERITTKGYGQSKPLTTNSSEAGRGKNRRVEMEI 1020
>gi|163866832|gb|ABY47586.1| outer membrane protein A [Acinetobacter baumannii]
Length = 334
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 53/133 (39%), Gaps = 5/133 (3%)
Query: 20 GIDNLDTKISSPDTVLNESS-LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LE 77
++ P V + L E + + VFFDT+ +I+ ++ + E
Sbjct: 201 AAPVVEVAPVEPTPVAPQPQELTEDLNMEL--RVFFDTNKSNIKDQYKPEIAKVAEKLSE 258
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVY 136
+ IEGH D G R + L L RA +V + V + ASR+ + + P
Sbjct: 259 YPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIAD 318
Query: 137 GHDEDAYAKNRRA 149
++ A NRR
Sbjct: 319 NKTKEGRAMNRRV 331
>gi|307545157|ref|YP_003897636.1| peptidoglycan-associated lipoprotein [Halomonas elongata DSM 2581]
gi|307217181|emb|CBV42451.1| K03640 peptidoglycan-associated lipoprotein [Halomonas elongata DSM
2581]
Length = 180
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 38/103 (36%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
+++F S +IRP VL+ + + + +++GH DE G+R ++ALG RRA A
Sbjct: 76 RTIYFAFDSDAIRPEFQSVLNAHARFLRNNPNANVVLQGHTDERGTREYNLALGERRAGA 135
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
V + +G+S S+++V SYG+E P+ G +E+AYA+NRR +
Sbjct: 136 VEEFLSVQGVSPSQVEVVSYGEERPAARGSNEEAYAQNRRVVF 178
>gi|126741131|ref|ZP_01756812.1| hypothetical protein RSK20926_01427 [Roseobacter sp. SK209-2-6]
gi|126717768|gb|EBA14489.1| hypothetical protein RSK20926_01427 [Roseobacter sp. SK209-2-6]
Length = 346
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 34/144 (23%), Positives = 57/144 (39%), Gaps = 2/144 (1%)
Query: 14 TMMSISGIDNLDTKISSPDTVLN-ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL 72
T + + + + T + N E+ + S SV F + + I L +L
Sbjct: 203 TAVPVQSVSSGATAALEVEGNFNREACVGRFEILSRSRSVNFAPGTSRLDGKSISFLDSL 262
Query: 73 GSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
+ + + GH D+ GS ++I L +RA +V Y +GI R+ YG+
Sbjct: 263 YDIVSRCPELIIEVGGHTDDKGSEAANIRLSQKRANSVVRYLAGKGIQTERLVAQGYGEA 322
Query: 132 MPSVYGHDEDAYAKNRRAIVFLKG 155
P V AKNRR ++
Sbjct: 323 SPLVPNTSAANRAKNRRITFVVQN 346
>gi|88857596|ref|ZP_01132239.1| probable outer membrane protein [Pseudoalteromonas tunicata D2]
gi|88820793|gb|EAR30605.1| probable outer membrane protein [Pseudoalteromonas tunicata D2]
Length = 293
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+G I L+ + ++GD V FD + I+PA I L+ L ++L
Sbjct: 154 AGAKQKVKDIQHQLDQLDARNSARGSVITLGD-VLFDFNKSDIKPAAISHLAKLATFLNT 212
Query: 79 H-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+ D + IEGH D +GS+ ++ L RRA ++ +Y + +G++ R++ + G +P +
Sbjct: 213 NIDRNITIEGHTDNIGSKKFNLLLSQRRADSIKDYLIGQGVARGRIQTSGKGISLPVIDN 272
Query: 138 HDEDAYAKNRRAIVFLK 154
D +NRR V +
Sbjct: 273 TTADHREQNRRVEVIIS 289
>gi|297537693|ref|YP_003673462.1| OmpA/MotB domain-containing protein [Methylotenera sp. 301]
gi|297257040|gb|ADI28885.1| OmpA/MotB domain protein [Methylotenera sp. 301]
Length = 224
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 52/128 (40%), Gaps = 1/128 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFL 84
+ ++ V + + + + F ++P +L + + + +
Sbjct: 83 EEATAGTGVAVTQTADNRLKLDIPSDISFAVGRADVQPNFRAILDTFANGLVTNPNSNVT 142
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
I GH D GS + L L RA +V +Y ++ ++++R+ + G P V A
Sbjct: 143 IIGHTDSTGSDAVNNPLSLNRAASVRDYLTSKRVASNRITIDGRGSREPLVANDTAANKA 202
Query: 145 KNRRAIVF 152
KNRR +F
Sbjct: 203 KNRRVEIF 210
>gi|198276042|ref|ZP_03208573.1| hypothetical protein BACPLE_02226 [Bacteroides plebeius DSM 17135]
gi|198271671|gb|EDY95941.1| hypothetical protein BACPLE_02226 [Bacteroides plebeius DSM 17135]
Length = 280
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 48/129 (37%), Gaps = 6/129 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
L + ++ D + F + S + + L L ++ + D IEGH D
Sbjct: 140 SDELTVREQNGKVYVAMSDKLLFQSGSAKLDKRGEEALGKLAEVLNKQTEIDVCIEGHTD 199
Query: 91 ELGSR----NSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ L + RA +V + + + +++ + G+ MP + AK
Sbjct: 200 NKPIHTAQFKDNWDLSVIRATSVVRILIEKYKVNPLQIQPSGRGEFMPVADNETAEGRAK 259
Query: 146 NRRAIVFLK 154
NRR + +
Sbjct: 260 NRRTEIIMS 268
>gi|187922936|ref|YP_001894578.1| hypothetical protein Bphyt_0935 [Burkholderia phytofirmans PsJN]
gi|187714130|gb|ACD15354.1| type IV / VI secretion system protein, DotU family [Burkholderia
phytofirmans PsJN]
Length = 414
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 46/127 (36%), Gaps = 4/127 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
++ S + F ++ + +++ + S + K + GH D
Sbjct: 286 AAGTVSVDEDARHSSVTFRGDAMFPPGGVNVNASMGPLIAKIASEIGKVPGKVTVTGHTD 345
Query: 91 ELGSRNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
L R+ A L RA V A G++A+R++ G+ P A+N
Sbjct: 346 NLPIRSRQFASNDALSEERATQVMQMLQASGVAAARLEAIGGGEANPIGDNATAQGRAQN 405
Query: 147 RRAIVFL 153
RR + +
Sbjct: 406 RRVEITV 412
>gi|171911103|ref|ZP_02926573.1| outer membrane protein [Verrucomicrobium spinosum DSM 4136]
Length = 479
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 59/137 (43%), Gaps = 7/137 (5%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD- 82
D SS + + L + +++F+ + P L+ + S L+
Sbjct: 341 ADNARSSAMVGIPYTPLVQNPKGGESIALYFEYDQAVLHPRAQAQLNIVASILKASPSKN 400
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG----- 137
I GH D GS ++AL RRA AV YF+ +G+ +++ +GK +P
Sbjct: 401 LKIGGHTDAKGSDQYNVALSQRRAAAVKQYFLDQGVPPLQVETVGFGKALPLSPNANPDG 460
Query: 138 -HDEDAYAKNRRAIVFL 153
+ + ++NRRA + L
Sbjct: 461 SDNPEGRSRNRRAEILL 477
>gi|116748592|ref|YP_845279.1| OmpA/MotB domain-containing protein [Syntrophobacter fumaroxidans
MPOB]
gi|116697656|gb|ABK16844.1| OmpA/MotB domain protein [Syntrophobacter fumaroxidans MPOB]
Length = 182
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 47/129 (36%), Gaps = 1/129 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFL 84
+ + + Q++ + V F S ++P ++ + +
Sbjct: 51 VQRMTRADGTSIQREQDKLCITFNCGVLFPDDSTELKPDAPARIAPVAEVLAKYPATSIK 110
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
++G D GS + RA AV + V +GI +R++ +G P ++
Sbjct: 111 VDGFTDRTGSEKYDHEITESRATAVRDVLVGKGIDPARIRARGFGDSKPLTTNATDEGRR 170
Query: 145 KNRRAIVFL 153
NRR + +
Sbjct: 171 TNRRVTITI 179
>gi|71065468|ref|YP_264195.1| OmpA/MotB family outer membrane protein [Psychrobacter arcticus
273-4]
gi|71038453|gb|AAZ18761.1| outer membrane protein, OmpA/MotB family [Psychrobacter arcticus
273-4]
Length = 172
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 47/164 (28%), Positives = 83/164 (50%), Gaps = 14/164 (8%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKIS-------------SPDTVLNESSLQEQFSSSV 48
+ + + ++ SA+ + S +++ + +++ S+ + ++
Sbjct: 7 KIAALAVLSSAVVLASGCATKRAISEVVVAPLGIPGGQVGYTGAVIVDNSNAVISGAENI 66
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAY 107
V+F S I VL+ L+ + +I GH DE GSR +IALG RRA
Sbjct: 67 QAVVYFAFDSSEITSQSAGVLNQHADLLKSNPSAGVVIAGHTDERGSREYNIALGERRAQ 126
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
A +Y A+G++A+ ++V SYG+E P+ G +EDAYA+NRRA +
Sbjct: 127 AARDYLAAQGVAANNIRVISYGEERPAAAGTNEDAYAQNRRAEL 170
>gi|84515818|ref|ZP_01003179.1| OmpA domain protein [Loktanella vestfoldensis SKA53]
gi|84510260|gb|EAQ06716.1| OmpA domain protein [Loktanella vestfoldensis SKA53]
Length = 637
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 44/124 (35%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHA 89
+ + + + + G + FD S SI A V+ ++ L D + G+
Sbjct: 476 AALPTPDQCIAQIIAMTDGRKITFDPGSASITAAAQPVIDDIAEVLRLCGDLRIRVAGYT 535
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G ++ L RA AV AR + S + YG P E NRR
Sbjct: 536 DSQGREAMNLRLSQDRADAVLTALRARRVPVSTFEAVGYGIADPIADNATEAGREANRRI 595
Query: 150 IVFL 153
L
Sbjct: 596 EFSL 599
>gi|119357876|ref|YP_912520.1| OmpA/MotB domain-containing protein [Chlorobium phaeobacteroides
DSM 266]
gi|119355225|gb|ABL66096.1| OmpA/MotB domain protein [Chlorobium phaeobacteroides DSM 266]
Length = 337
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 52/139 (37%), Gaps = 6/139 (4%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDS----VFFDTSSYSIRPADIQVLSNLGSW 75
+D ++T+ V + Q +S G ++FDT+ I+PA L +
Sbjct: 197 AVDVVETQPMVQKMVTVSADQMTQAITSTGRVSLYGIYFDTNKSDIKPASSPALVEIAKL 256
Query: 76 LEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMP 133
++ + GH D +G ++ L RRA AV V +R+ P
Sbjct: 257 MKSQPALKLHVVGHTDNVGGYEFNMGLSKRRADAVVASLVRNHGIAPARLAANGVAYLAP 316
Query: 134 SVYGHDEDAYAKNRRAIVF 152
E AKNRR +
Sbjct: 317 VAPNTTEAGRAKNRRVELV 335
>gi|171318547|ref|ZP_02907697.1| type IV / VI secretion system protein, DotU family [Burkholderia
ambifaria MEX-5]
gi|171096248|gb|EDT41156.1| type IV / VI secretion system protein, DotU family [Burkholderia
ambifaria MEX-5]
Length = 460
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 42/118 (35%), Gaps = 3/118 (2%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS---R 95
++ ++ F + S + P+ + V+ +G L ++ GH D +
Sbjct: 336 ETADRAVITLNSDGLFASGSARVLPSQVSVIRRIGDALRDVPGRVIVVGHTDNQPPSPGK 395
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L L RA +V R G+ P A+NRR ++ +
Sbjct: 396 PSNWQLSLDRAGSVVQLLRDEAGGLERFLAQGRGESEPVAPDDSAADRARNRRVVITV 453
>gi|254249294|ref|ZP_04942614.1| Outer membrane protein [Burkholderia cenocepacia PC184]
gi|124875795|gb|EAY65785.1| Outer membrane protein [Burkholderia cenocepacia PC184]
Length = 263
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 39/136 (28%), Gaps = 1/136 (0%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVL-SNLGSWLE 77
G + + Q + F T S ++ L + +
Sbjct: 125 CGKPQPVVQPAPAPAPQPAPQPVPQRQVLLQGDANFATDSAALTSQARNDLDRFIAANRG 184
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
I G D GS + L RA V NY + G+ A G P
Sbjct: 185 VEFARVAITGFTDSTGSAAHNRTLSEARARTVVNYLRSNGLQARSFSAEGLGAADPVASN 244
Query: 138 HDEDAYAKNRRAIVFL 153
D A+NRR + L
Sbjct: 245 ATADGRAQNRRVEIRL 260
>gi|326791532|ref|YP_004309353.1| OmpA/MotB domain protein [Clostridium lentocellum DSM 5427]
gi|326542296|gb|ADZ84155.1| OmpA/MotB domain protein [Clostridium lentocellum DSM 5427]
Length = 248
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 48/140 (34%), Gaps = 8/140 (5%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-- 80
K D + + D + FDT I+P I L+ +G L ++
Sbjct: 105 KAYVKAKEIDDKITVQKSGDMIVIRFADILLFDTGKADIKPGAIPNLNLIGEKLREYIDQ 164
Query: 81 -CDFLIEGHADELGSR----NSSIALGLRRAYAVFN-YFVARGISASRMKVTSYGKEMPS 134
+EGH D S+ L RA AV Y + S++ G+ P
Sbjct: 165 GYHLRVEGHTDNQPIHTAQFPSNWELSSARAIAVMRFYLEEMDFNPSKISAEGMGEYHPI 224
Query: 135 VYGHDEDAYAKNRRAIVFLK 154
+ A+NRR + L
Sbjct: 225 SSNATSEERAQNRRVEIKLS 244
>gi|123442902|ref|YP_001006877.1| putative OmpA family protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122089863|emb|CAL12719.1| putative OmpA family protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 458
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 41/123 (33%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
++ + F S +R + V+ + + + LI GH D +
Sbjct: 334 VSVDETSSRSKVIFKGDTMFQVGSDKVRSEIMSVIERVAQEVHRVQGAVLIIGHTDSMPI 393
Query: 95 RNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
L +RA V + GI +++ G P D ++NRR
Sbjct: 394 NKPGFPNNQVLSEKRAANVARFMEKAGIPTDKIQFEGKGDTQPVSSNDDAAGRSQNRRVE 453
Query: 151 VFL 153
+F+
Sbjct: 454 IFV 456
>gi|78484555|ref|YP_390480.1| OmpA/MotB [Thiomicrospira crunogena XCL-2]
gi|78362841|gb|ABB40806.1| OmpA family protein [Thiomicrospira crunogena XCL-2]
Length = 314
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 38/139 (27%), Positives = 57/139 (41%), Gaps = 4/139 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE--KH 79
+N D ++P V E S V + VF D SY IRP +L S L K
Sbjct: 155 NNKDQCPNTPIGVTVNQYGCEPKSLVVTNIVF-DLGSYKIRPDQKPILDKDISQLRSLKD 213
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGH 138
+I G D LGS +S++ L RA A +Y V + + + V G+ P
Sbjct: 214 HERIVITGFTDSLGSESSNLKLSWNRAQATKDYLVRKFKYDPASILVLGKGEANPVATNK 273
Query: 139 DEDAYAKNRRAIVFLKGCR 157
++ +NRR + +
Sbjct: 274 TKEGRKQNRRISFMIMDQQ 292
>gi|225849164|ref|YP_002729328.1| chemotaxis protein MotB [Sulfurihydrogenibium azorense Az-Fu1]
gi|225643203|gb|ACN98253.1| chemotaxis protein MotB (Motility protein B) [Sulfurihydrogenibium
azorense Az-Fu1]
Length = 265
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 48/132 (36%), Gaps = 7/132 (5%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ + + + D + F+ S I+ ++LS++ +++ + +EGH D
Sbjct: 100 EGKVQVEVIPMGVRIRILDYILFNPCSVEIKKEYQELLSSVAEVIKEANLPVEVEGHTDN 159
Query: 92 -----LGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
S+ L RA +V + ++ + + Y P E +
Sbjct: 160 IPPSGNCIYPSNWELSAARAASVVRFLIQSKNLPPAMFTAVGYADTRPIAPNTSEIGRSM 219
Query: 146 NRRAIV-FLKGC 156
NRR + + G
Sbjct: 220 NRRIEINLITGT 231
>gi|119476926|ref|ZP_01617207.1| ompA family protein [marine gamma proteobacterium HTCC2143]
gi|119449733|gb|EAW30970.1| ompA family protein [marine gamma proteobacterium HTCC2143]
Length = 213
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIA 100
+ + S+ F+T SY +R + VL ++G + ++ + GH D G +
Sbjct: 97 DNIRLIMPGSITFETDSYVLRRSFSPVLESVGLVLAKYNETMMRVTGHTDNTGGEQYNQR 156
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V + +++G+ +R+ + G+ MP + A NRR +++
Sbjct: 157 LSEDRAQSVASNLMSQGVDGNRLYIQGSGETMPIADNNTSSGRASNRRVELYI 209
>gi|170725705|ref|YP_001759731.1| OmpA/MotB domain-containing protein [Shewanella woodyi ATCC 51908]
gi|169811052|gb|ACA85636.1| OmpA/MotB domain protein [Shewanella woodyi ATCC 51908]
Length = 190
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 50/123 (40%), Gaps = 1/123 (0%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
L+E + + + F+ + + A QV + + +L++HD + GH D +
Sbjct: 67 PTLDEQFYPRTCTQATPLVLNFEFAQAEVMFAQWQVFTRIKRFLQEHDVKLCLLGHTDSV 126
Query: 93 GSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
G+ ++AL RA V G + R +V P + A NRR +
Sbjct: 127 GAEAGNMALSHLRALNVKRILVDDLGFNPDRFQVKGMADTHPVASNDFPEGRAMNRRVEL 186
Query: 152 FLK 154
F++
Sbjct: 187 FVE 189
>gi|110638992|ref|YP_679201.1| outer membrane peptidoglycan-associated protein [Cytophaga
hutchinsonii ATCC 33406]
gi|110281673|gb|ABG59859.1| outer membrane peptidoglycan-associated protein [Cytophaga
hutchinsonii ATCC 33406]
Length = 710
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 53/150 (35%), Gaps = 8/150 (5%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL 72
+I+ L S + + V + ++T+ + + N+
Sbjct: 560 CATPTITKSLTLVPVSVSMKNSEPVIETPVEGKAFVLKDIQYETNQTDLNDEAKAAIDNI 619
Query: 73 GSWL--EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
E +I H D++GS + L +RA V Y + +GISA +++ YG+
Sbjct: 620 LIPFLKEHPTDKIIISSHTDDVGSHKYNENLSDQRALKVMQYLIQKGISAKQIQAKGYGE 679
Query: 131 EMPSVYG------HDEDAYAKNRRAIVFLK 154
P +E + NRR +
Sbjct: 680 TKPIASNINPDGSENEIGRSINRRTEFLIS 709
>gi|261212428|ref|ZP_05926713.1| protein F-related protein [Vibrio sp. RC341]
gi|260838359|gb|EEX65015.1| protein F-related protein [Vibrio sp. RC341]
Length = 182
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIA 100
+ + +++ F+T S + + Q L + +L D ++EGH D G++ +
Sbjct: 65 DYPMIKLKNTIKFETGSAKVSASSKQWLDKMAQFLAGESGVDIVLEGHTDNTGTQKFNDK 124
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
L +RA +V + V R ++ + + YG+ +P+ + + A NRR V
Sbjct: 125 LSEKRATSVKSALVQRQVAQNAIYTRGYGEHVPACTNNTKKGRACNRRVEV 175
>gi|224418201|ref|ZP_03656207.1| lipoprotein precursor [Helicobacter canadensis MIT 98-5491]
gi|253827528|ref|ZP_04870413.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|313141736|ref|ZP_07803929.1| lipoprotein [Helicobacter canadensis MIT 98-5491]
gi|253510934|gb|EES89593.1| conserved hypothetical protein [Helicobacter canadensis MIT
98-5491]
gi|313130767|gb|EFR48384.1| lipoprotein [Helicobacter canadensis MIT 98-5491]
Length = 174
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 41/171 (23%), Positives = 72/171 (42%), Gaps = 19/171 (11%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---------- 50
M+ S +F L A +M + + SS + + + +
Sbjct: 1 MKKSLVFGSLVAALLMVGCSQKSGNVGTSSAQDSTANQGVSQGYVGGRDNFVNLEERIQY 60
Query: 51 ------SVFFDTSSYSIRPADIQVLSNLGSWLEKH---DCDFLIEGHADELGSRNSSIAL 101
+VFF+ + IR V+ N + L+ +EG+ DE G+ + AL
Sbjct: 61 VEGGLQNVFFNFDQFVIRADMQNVVDNDANVLKDVSAAPLSVRVEGNTDEWGTDEYNYAL 120
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
GL+RA AV VA+G+S S++ + SYG+ P+ + +A+NR+
Sbjct: 121 GLKRAVAVKEALVAKGVSESKIVLVSYGESKPTCTQKTRECWAENRKVTFK 171
>gi|146305280|ref|YP_001185745.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp]
gi|145573481|gb|ABP83013.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp]
Length = 317
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 2/103 (1%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
++FDT +R L+ + L+ L+ GH D G+ + + L RRA ++
Sbjct: 211 LYFDTDKADMRADSQPQLAEIAKLLQASAQLQVLVVGHTDAQGALDYNRDLSQRRAQSIV 270
Query: 111 NYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
V++ A R+ G P DE A NRR +
Sbjct: 271 EALVSQHGIARQRLSAVGVGMAAPVASNRDEAGRALNRRVELV 313
>gi|288553786|ref|YP_003425721.1| flagellar motor protein MotS [Bacillus pseudofirmus OF4]
gi|34485061|gb|AAB94398.2| channel protein [Bacillus pseudofirmus OF4]
gi|288544946|gb|ADC48829.1| Flagellar motor rotation protein motS [Bacillus pseudofirmus OF4]
gi|327187185|dbj|BAK08926.1| B-subunit of channel/stator unit of Na(+)-driven flagellar motor
[Bacillus pseudofirmus]
Length = 252
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 48/133 (36%), Gaps = 5/133 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+++ + V++ + + + F+T+ + + L +G+ L +E
Sbjct: 110 EVNEMNDVISATRDDRGVVLVLQERTLFETAEAELLDSAEPFLEKVGTLLSAIPNMVKVE 169
Query: 87 GHADELGS----RNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDED 141
GH D S+ L RA +V Y + R T YG P V +
Sbjct: 170 GHTDSRPISNFRYPSNWELSGARASSVIRYLVETNDLDPKRFIATGYGDTRPVVPNTTVE 229
Query: 142 AYAKNRRAIVFLK 154
NRR ++ +
Sbjct: 230 NLQLNRRVVIVIS 242
>gi|163866824|gb|ABY47582.1| outer membrane protein A [Acinetobacter baumannii]
Length = 337
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 53/133 (39%), Gaps = 5/133 (3%)
Query: 20 GIDNLDTKISSPDTVLNESS-LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LE 77
++ P V + L E + + VFFDT+ +I+ ++ + E
Sbjct: 201 AAPVVEVAPVEPTPVAPQPQELTEDLNMEL--RVFFDTNKSNIKDQYKPEIAKVAEKLSE 258
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVY 136
+ IEGH D G R + L L RA +V + V + ASR+ + + P
Sbjct: 259 YPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIAD 318
Query: 137 GHDEDAYAKNRRA 149
++ A NRR
Sbjct: 319 NKTKEGRAMNRRV 331
>gi|94309565|ref|YP_582775.1| OmpA/MotB [Cupriavidus metallidurans CH34]
gi|93353417|gb|ABF07506.1| putative OmpA/MotB (family of outer membrane porins precursor)
[Cupriavidus metallidurans CH34]
Length = 572
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 41/103 (39%), Gaps = 2/103 (1%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
F + S + +VL ++ H L+ GH D +G +++ L RA +V +
Sbjct: 447 LFKSGSALLNLGSNRVLIGALEMIKAHPDKRVLVAGHTDSVGDSRANLKLSEARAASVRD 506
Query: 112 YFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +R + YG+ P E A NRR + L
Sbjct: 507 WLADAADLPVTRFAIQGYGETRPKAPNEPEAGRAANRRVEITL 549
>gi|53720708|ref|YP_109694.1| putative outer membrane protein [Burkholderia pseudomallei K96243]
gi|52211122|emb|CAH37110.1| putative outer membrane protein [Burkholderia pseudomallei K96243]
Length = 310
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++ F+T S ++ P +L + + + I GH D G+R S+IAL RA
Sbjct: 203 NRTIEFETGSATLTPQGRAILDQMAGALAKMSNRTVEIIGHTDNSGNRTSNIALSQARAD 262
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
AV Y V +GI++ ++ T G + P D A+NRR
Sbjct: 263 AVKGYLVTKGIASQQLTTTGVGPDQPIAPNDSADGRARNRRIEF 306
>gi|313200972|ref|YP_004039630.1| ompa/motb domain-containing protein [Methylovorus sp. MP688]
gi|312440288|gb|ADQ84394.1| OmpA/MotB domain protein [Methylovorus sp. MP688]
Length = 444
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 45/130 (34%), Gaps = 7/130 (5%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHA 89
+ V E GD +F + PA +++ +G + + GH+
Sbjct: 304 AQGKVRVEEDSAHAIVVFKGDGMFSG-GLAMLSPATREIVEKVGRAVADVQGRVRVVGHS 362
Query: 90 DEL------GSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
D ++ L +RA AV G+ SR++V G P
Sbjct: 363 DNQKLSGKNPEFKNNQILSEKRAQAVVQVMTEMGVDNSRIEVAGMGDTQPITSNSTASGR 422
Query: 144 AKNRRAIVFL 153
AKNRR + +
Sbjct: 423 AKNRRVEIEV 432
>gi|53723969|ref|YP_104341.1| OmpA domain-containing protein [Burkholderia mallei ATCC 23344]
gi|67640679|ref|ZP_00439477.1| OmpA family protein [Burkholderia mallei GB8 horse 4]
gi|121600594|ref|YP_991404.1| ompA family protein [Burkholderia mallei SAVP1]
gi|124386056|ref|YP_001027695.1| ompA family protein [Burkholderia mallei NCTC 10229]
gi|126450255|ref|YP_001082667.1| ompA family protein [Burkholderia mallei NCTC 10247]
gi|167001412|ref|ZP_02267211.1| ompA family protein [Burkholderia mallei PRL-20]
gi|167908671|ref|ZP_02495876.1| ompA family protein [Burkholderia pseudomallei NCTC 13177]
gi|217424718|ref|ZP_03456215.1| ompA family protein [Burkholderia pseudomallei 576]
gi|237814018|ref|YP_002898469.1| OmpA family protein [Burkholderia pseudomallei MSHR346]
gi|254174698|ref|ZP_04881359.1| ompA family protein [Burkholderia mallei ATCC 10399]
gi|254201416|ref|ZP_04907780.1| ompA family protein [Burkholderia mallei FMH]
gi|254206758|ref|ZP_04913109.1| ompA family protein [Burkholderia mallei JHU]
gi|254357247|ref|ZP_04973521.1| ompA family protein [Burkholderia mallei 2002721280]
gi|52427392|gb|AAU47985.1| OmpA domain protein [Burkholderia mallei ATCC 23344]
gi|121229404|gb|ABM51922.1| ompA family protein [Burkholderia mallei SAVP1]
gi|124294076|gb|ABN03345.1| ompA family protein [Burkholderia mallei NCTC 10229]
gi|126243125|gb|ABO06218.1| ompA family protein [Burkholderia mallei NCTC 10247]
gi|147747310|gb|EDK54386.1| ompA family protein [Burkholderia mallei FMH]
gi|147752300|gb|EDK59366.1| ompA family protein [Burkholderia mallei JHU]
gi|148026311|gb|EDK84396.1| ompA family protein [Burkholderia mallei 2002721280]
gi|160695743|gb|EDP85713.1| ompA family protein [Burkholderia mallei ATCC 10399]
gi|217392174|gb|EEC32199.1| ompA family protein [Burkholderia pseudomallei 576]
gi|237502962|gb|ACQ95280.1| OmpA family protein [Burkholderia pseudomallei MSHR346]
gi|238521446|gb|EEP84897.1| OmpA family protein [Burkholderia mallei GB8 horse 4]
gi|243062825|gb|EES45011.1| ompA family protein [Burkholderia mallei PRL-20]
Length = 310
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAY 107
++ F+T S ++ P +L + L K I GH D G+R S+IAL RA
Sbjct: 203 NRTIEFETGSATLTPQGRAILDQMAGALAKMSSRTVEIIGHTDNSGNRTSNIALSQARAD 262
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
AV Y V +GI++ ++ T G + P D A+NRR
Sbjct: 263 AVKGYLVTKGIASQQLTTTGVGPDQPIAPNDSADGRARNRRIEF 306
>gi|330831642|ref|YP_004394594.1| outer membrane lipoprotein [Aeromonas veronii B565]
gi|328806778|gb|AEB51977.1| Outer membrane lipoprotein [Aeromonas veronii B565]
Length = 218
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHA 89
T ++ + + ++ ++V FD+SS ++ A LS + + E + GH
Sbjct: 91 QGTGVSVTRNGNELILNMPNNVTFDSSSSQLKAAGANTLSGVAMVVAEFDKTRLNVVGHT 150
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GSR+ ++ L RA AV + +G++ SR+ T G + P A+NRR
Sbjct: 151 DSTGSRDLNMKLSRDRADAVAAQLIGQGVAGSRISTTGVGPDQPVATNSTAAGKAQNRRV 210
Query: 150 IVFL 153
+ L
Sbjct: 211 TITL 214
>gi|308273524|emb|CBX30126.1| hypothetical protein N47_D29350 [uncultured Desulfobacterium sp.]
Length = 219
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 54/140 (38%), Gaps = 5/140 (3%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
I+N+ + + D ++ + S+ + + F+ I+ + ++L ++ + +
Sbjct: 76 SIENIKAALKNIDGSVDIKEDERGIVLSLHEDILFEPGKSVIKKENYRILDSIAAVADAC 135
Query: 80 DCDFLIEGHADELG----SRNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPS 134
+I GH D+L S+ L R V NYF+ R V YG P
Sbjct: 136 PNKIMIMGHTDDLPVQVGEYESNWELSAYRGLYVLNYFINNKHLPPDRFNVGGYGAFRPL 195
Query: 135 VYGHDEDAYAKNRRAIVFLK 154
+ + NRR + K
Sbjct: 196 FPNNSAKNRSLNRRVEIIFK 215
>gi|294789485|ref|ZP_06754721.1| outer membrane porin F [Simonsiella muelleri ATCC 29453]
gi|294482565|gb|EFG30256.1| outer membrane porin F [Simonsiella muelleri ATCC 29453]
Length = 307
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 47/120 (39%), Gaps = 2/120 (1%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSR 95
E ++ V FDT ++ + + ++++ +EGH D S
Sbjct: 180 EQPPAPVEKVTIELKVLFDTDKSFVKSQYYSEIEQVAEYMKRFPNTSVTLEGHTDSRASD 239
Query: 96 NSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+I L RR AV + + R I +R+ YG+ P+ + +NRR + +
Sbjct: 240 EYNIGLSQRRMNAVRDILIRRYGIDGARVHAVGYGESRPAYPNTTPENMHQNRRVVAVFE 299
>gi|260597724|ref|YP_003210295.1| hypothetical protein CTU_19320 [Cronobacter turicensis z3032]
gi|260216901|emb|CBA30471.1| hypothetical protein CTU_19320 [Cronobacter turicensis z3032]
Length = 520
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
Query: 53 FFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FDT + ++P +VL N L K ++ GH D++G ++ L L+RA +V +
Sbjct: 393 LFDTGQWRLKPGSTKVLVNALVGIKAKPGWLIVVAGHTDDVGDERANQQLSLKRAESVRD 452
Query: 112 YFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ G V YG+ P+ A NRR + L
Sbjct: 453 WMRDTGDVPESCFAVQGYGESRPAAPNTTTQGRALNRRVEISL 495
>gi|237653594|ref|YP_002889908.1| flagellar motor protein MotD [Thauera sp. MZ1T]
gi|237624841|gb|ACR01531.1| OmpA/MotB domain protein [Thauera sp. MZ1T]
Length = 279
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 50/137 (36%), Gaps = 4/137 (2%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ + + S + S+ F ++ + L + L + +E
Sbjct: 117 SPLTGSGQVKVTEGAFGVSVEINASLLFAPGEAALGSNAVSALQAVARVLAPAEFPITVE 176
Query: 87 GHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
GH D + S+ L RA V F+ G++ +R+ Y + P DE+
Sbjct: 177 GHTDNVPISTFRFPSNWELSAVRASTVARLFIDNGVTPARLTAAGYADQRPVADNADEEG 236
Query: 143 YAKNRRAIVFLKGCRAN 159
+NRR + ++ A+
Sbjct: 237 RGRNRRVTILIESRMAD 253
>gi|327187194|dbj|BAK08932.1| B-subunit of channel/stator unit of Na(+)-driven flagellar motor
[Bacillus pseudofirmus]
Length = 252
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 48/133 (36%), Gaps = 5/133 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+++ + V++ + + + F+T+ + + L +G+ L +E
Sbjct: 110 EVNEMNDVISATRDDRGVVLVLQERTLFETAEAELLDSAEPFLEKVGTLLSAIPNMVKVE 169
Query: 87 GHADELGS----RNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDED 141
GH D S+ L RA +V Y + R T YG P V +
Sbjct: 170 GHTDSRPISNFRYPSNWELSGARASSVIRYLVETNDLDPKRFIATGYGDTRPVVPNTTVE 229
Query: 142 AYAKNRRAIVFLK 154
NRR ++ +
Sbjct: 230 NLQLNRRVVIVIS 242
>gi|171319661|ref|ZP_02908754.1| type VI secretion system OmpA/MotB family protein [Burkholderia
ambifaria MEX-5]
gi|171095114|gb|EDT40122.1| type VI secretion system OmpA/MotB family protein [Burkholderia
ambifaria MEX-5]
Length = 411
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 44/127 (34%), Gaps = 4/127 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
++ + + F S++ + ++S + + + K I G+ D
Sbjct: 283 AAGTVSVDEDARHSAVTFRGDAMFKPGGASVQASMNPLISKIAAEIAKVPGKVTIIGYTD 342
Query: 91 ELGSRNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ R+ A L RA V G+ A+R++ G P A+N
Sbjct: 343 NVPIRSRHFASNQMLSEERATQVMQMLQTAGVPANRLEAVGKGDADPVGDNRTAQGRAQN 402
Query: 147 RRAIVFL 153
RR + +
Sbjct: 403 RRVEIDV 409
>gi|300693692|ref|YP_003749665.1| outer membrane protein; ompa/motb domain [Ralstonia solanacearum
PSI07]
gi|299075729|emb|CBJ35033.1| putative outer membrane protein; OmpA/MotB domain [Ralstonia
solanacearum PSI07]
Length = 280
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 51/120 (42%), Gaps = 3/120 (2%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADE 91
++E SL +Q + + F+T S ++ P +L + + + I GH D
Sbjct: 159 AAVSEQSLLDQTLA--NRIIEFETGSATLTPKGRGILDEMAAVLPRLNGRKIEIVGHTDN 216
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
GSR ++ L RA V NY +++G + G + P ++ ++NRR
Sbjct: 217 SGSRAMNLNLSQTRAETVKNYLISKGAEPGTLTAIGVGPDQPVAANTTDEGRSRNRRIEF 276
>gi|325525952|gb|EGD03644.1| hypothetical protein B1M_15465 [Burkholderia sp. TJI49]
Length = 360
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 46/127 (36%), Gaps = 4/127 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
++ + + + F S++ + +++ + + + K I G+ D
Sbjct: 232 AAGTVSVDEDARRSAVTFRGDAMFLPGGASVQASMNPLIAKIAAEIAKVPGKVTIIGYTD 291
Query: 91 ELGSRNSSI----ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ R+ AL RA V A G+ A+R++ G P A+N
Sbjct: 292 NVPIRSRQFSSNQALSEERATQVMQMLQAAGVPANRLEAVGKGDADPVGDNRTAQGRAQN 351
Query: 147 RRAIVFL 153
RR + +
Sbjct: 352 RRVEIDV 358
>gi|310644267|ref|YP_003949026.1| ompa/motb domain protein [Paenibacillus polymyxa SC2]
gi|309249218|gb|ADO58785.1| OmpA/MotB domain protein [Paenibacillus polymyxa SC2]
Length = 271
Score = 74.1 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 43/131 (32%), Gaps = 9/131 (6%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ S ++ D FD +++ LS L S IEGH D
Sbjct: 135 QNQIFVSDQPRGIVITLNDRFLFDQGRAALKQGSANTLSKLASLFRDLKTPISIEGHTDN 194
Query: 92 LG--------SRNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDA 142
+ + + L RA +V +F+ R S S + Y P E
Sbjct: 195 IPFTRSSNSSTYKDNWELSGARALSVLRFFIDREQLSPSGFQYAGYADTRPVGDNSTEAG 254
Query: 143 YAKNRRAIVFL 153
KNRR + +
Sbjct: 255 RQKNRRVEITV 265
>gi|325287126|ref|YP_004262916.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
gi|324322580|gb|ADY30045.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
Length = 343
Score = 74.1 bits (180), Expect = 7e-12, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 58/146 (39%), Gaps = 7/146 (4%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDS------VFFDTSSYSIRPADI 66
I S + + + E + D + FDT I+
Sbjct: 195 IAFQVSSNSKTISVVENKAFVQTIQKVTAEDILKEITDKGIATLHINFDTGKSRIKADSY 254
Query: 67 QVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
+V+S + ++ + IEGH D +G +S++ L RA AV V GI+ +R+K
Sbjct: 255 EVISEISKMMKSNPELKISIEGHTDNVGDASSNLKLSKNRAQAVLMAIVEEGINETRLKS 314
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIV 151
+G+ P E+ A+NRR +
Sbjct: 315 EGFGQTKPLDDNTTEEGKAQNRRVEL 340
>gi|327404330|ref|YP_004345168.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
16823]
gi|327319838|gb|AEA44330.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
Length = 809
Score = 74.1 bits (180), Expect = 7e-12, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 59/138 (42%), Gaps = 6/138 (4%)
Query: 22 DNLDTKISSPDTVLNESSL-----QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW- 75
D D + P + N +++ ++ +++ F + I + L +L +
Sbjct: 669 DKDDACPTIPGPIENRGCPKIEKEEQEILNTAFENLEFASGKAIILATSFKSLDDLAALL 728
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
++K + I GH D G ++ L RA AV Y ++G+ A+++K +G+ P
Sbjct: 729 IKKPEWKLQIAGHTDNKGDAKKNLTLSKNRAEAVKKYLTSKGVDATKLKPEWFGQTKPIA 788
Query: 136 YGHDEDAYAKNRRAIVFL 153
+ KNRR + +
Sbjct: 789 TNATPEGRQKNRRVEMNV 806
>gi|118581722|ref|YP_902972.1| OmpA/MotB domain-containing protein [Pelobacter propionicus DSM
2379]
gi|118504432|gb|ABL00915.1| OmpA/MotB domain protein [Pelobacter propionicus DSM 2379]
Length = 180
Score = 74.1 bits (180), Expect = 7e-12, Method: Composition-based stats.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 3/141 (2%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
+ ++ + +P + E +++ D +FD +R LS
Sbjct: 39 AVEVTQPAAPAAPVEAPKVEETAKADSEAVAAAF-DVAYFDFDKSDLRQDARDALSKNAD 97
Query: 75 WL--EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
+ + IEGH DE GS ++ALG RRA + Y + G+ + R+ + SYG+E
Sbjct: 98 IMLKTNTAANVKIEGHCDERGSAEYNMALGERRAKSALQYLLTLGVPSQRLSIVSYGEEK 157
Query: 133 PSVYGHDEDAYAKNRRAIVFL 153
P+ G +E+A+AKNRR +
Sbjct: 158 PAAQGGNEEAWAKNRRTEFVV 178
>gi|86152850|ref|ZP_01071055.1| outer membrane fibronectin-binding protein [Campylobacter jejuni
subsp. jejuni HB93-13]
gi|85843735|gb|EAQ60945.1| outer membrane fibronectin-binding protein [Campylobacter jejuni
subsp. jejuni HB93-13]
Length = 319
Score = 74.1 bits (180), Expect = 7e-12, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 53/144 (36%), Gaps = 3/144 (2%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+ ++ + + ++ F +I P + + +
Sbjct: 176 AVEEVADTRATPQAKCPVEPREGALLDENGCEKTISLEGHFGFDKTTINPTFQEKIKEIA 235
Query: 74 SW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
E D ++EGH D +GSR + L RRA +V N G+ SR+K YG++
Sbjct: 236 KVLDENERYDTILEGHTDNIGSRAYNQKLSERRAKSVANELEKYGVEKSRIKTVGYGQDN 295
Query: 133 PSVYGHDEDAYAKNRRAI--VFLK 154
P ++ A NRR L+
Sbjct: 296 PRSSNDTKEGRADNRRVDAKFILR 319
>gi|86149287|ref|ZP_01067518.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|86152031|ref|ZP_01070244.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni
260.94]
gi|88596498|ref|ZP_01099735.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni
84-25]
gi|205356091|ref|ZP_03222858.1| outer membrane fibronectin binding protein [Campylobacter jejuni
subsp. jejuni CG8421]
gi|218563079|ref|YP_002344858.1| outer membrane fibronectin-binding protein [Campylobacter jejuni
subsp. jejuni NCTC 11168]
gi|85840069|gb|EAQ57327.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|85841139|gb|EAQ58388.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni
260.94]
gi|88191339|gb|EAQ95311.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni
84-25]
gi|112360785|emb|CAL35585.1| outer membrane fibronectin-binding protein [Campylobacter jejuni
subsp. jejuni NCTC 11168]
gi|205345934|gb|EDZ32570.1| outer membrane fibronectin binding protein [Campylobacter jejuni
subsp. jejuni CG8421]
gi|284926685|gb|ADC29037.1| outer membrane fibronectin-binding protein [Campylobacter jejuni
subsp. jejuni IA3902]
gi|315927426|gb|EFV06764.1| oprF membrane domain protein [Campylobacter jejuni subsp. jejuni
DFVF1099]
gi|315930550|gb|EFV09590.1| oprF membrane domain protein [Campylobacter jejuni subsp. jejuni
305]
Length = 319
Score = 74.1 bits (180), Expect = 7e-12, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 53/144 (36%), Gaps = 3/144 (2%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+ ++ + + ++ F +I P + + +
Sbjct: 176 AVEEVADTRATPQAKCPVEPREGALLDENGCEKTISLEGHFGFDKTTINPTFQEKIKEIA 235
Query: 74 SW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
E D ++EGH D +GSR + L RRA +V N G+ SR+K YG++
Sbjct: 236 KVLDENERYDTILEGHTDNIGSRAYNQKLSERRAKSVANELEKYGVEKSRIKTVGYGQDN 295
Query: 133 PSVYGHDEDAYAKNRRAI--VFLK 154
P ++ A NRR L+
Sbjct: 296 PRSSNDTKEGRADNRRVDAKFILR 319
>gi|167463460|ref|ZP_02328549.1| flagellar motor protein MotB [Paenibacillus larvae subsp. larvae
BRL-230010]
Length = 258
Score = 74.1 bits (180), Expect = 7e-12, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 47/130 (36%), Gaps = 8/130 (6%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ + + + S ++ D FD ++P VL+ L S D IEGH D
Sbjct: 127 EAQIAVGNSERGVSVTLKDLFLFDLGKAELKPEAYPVLNKLASLFPTLDTKISIEGHTDN 186
Query: 92 LG-----SRNSSIALGLRRAYAVFNYFVARGISAS---RMKVTSYGKEMPSVYGHDEDAY 143
+ + L R+ +V YF + + T Y +P +
Sbjct: 187 IPVRTGSPFQDNWGLSNARSLSVLRYFTTKADPKISDSKFMSTGYADTIPVAPNDSMENR 246
Query: 144 AKNRRAIVFL 153
AKNRR + +
Sbjct: 247 AKNRRVEIVI 256
>gi|145588462|ref|YP_001155059.1| OmpA/MotB domain-containing protein [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
gi|145046868|gb|ABP33495.1| OmpA/MotB domain protein [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 167
Score = 74.1 bits (180), Expect = 7e-12, Method: Composition-based stats.
Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 4/151 (2%)
Query: 6 IFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQ---EQFSSSVGDSVFFDTSSYSIR 62
I +A M + S + D ++ Q + S SV+F Y+++
Sbjct: 13 ALIGATAFLMAACSSVKLDDVDGANGSGGSGSYGSQPWNDPKSPLFEKSVYFGFDEYTVQ 72
Query: 63 PADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS 121
++LS S+L+ + +I+G+ DE G+ ++ALG RR+ AV G+S
Sbjct: 73 TKYQKMLSAHASYLKANPKQKIIIQGNTDERGTAEYNLALGQRRSDAVRKSLNLMGVSDD 132
Query: 122 RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+M+ S+GKE P G E A+A+NRRA +
Sbjct: 133 QMEAVSFGKEKPKAEGDSEAAFAENRRADIV 163
>gi|153215326|ref|ZP_01949939.1| lipoprotein, putative [Vibrio cholerae 1587]
gi|153826671|ref|ZP_01979338.1| lipoprotein, putative [Vibrio cholerae MZO-2]
gi|153829618|ref|ZP_01982285.1| putative lipoprotein [Vibrio cholerae 623-39]
gi|183179599|ref|ZP_02957810.1| lipoprotein, putative [Vibrio cholerae MZO-3]
gi|229515575|ref|ZP_04405034.1| outer membrane protein [Vibrio cholerae TMA 21]
gi|229520377|ref|ZP_04409802.1| outer membrane protein [Vibrio cholerae TM 11079-80]
gi|229525804|ref|ZP_04415209.1| outer membrane protein [Vibrio cholerae bv. albensis VL426]
gi|229529718|ref|ZP_04419108.1| outer membrane protein [Vibrio cholerae 12129(1)]
gi|254226715|ref|ZP_04920292.1| lipoprotein, putative [Vibrio cholerae V51]
gi|262191649|ref|ZP_06049827.1| outer membrane protein [Vibrio cholerae CT 5369-93]
gi|297578794|ref|ZP_06940722.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|124114769|gb|EAY33589.1| lipoprotein, putative [Vibrio cholerae 1587]
gi|125620776|gb|EAZ49133.1| lipoprotein, putative [Vibrio cholerae V51]
gi|148874894|gb|EDL73029.1| putative lipoprotein [Vibrio cholerae 623-39]
gi|149739533|gb|EDM53761.1| lipoprotein, putative [Vibrio cholerae MZO-2]
gi|183013010|gb|EDT88310.1| lipoprotein, putative [Vibrio cholerae MZO-3]
gi|229333492|gb|EEN98978.1| outer membrane protein [Vibrio cholerae 12129(1)]
gi|229339385|gb|EEO04402.1| outer membrane protein [Vibrio cholerae bv. albensis VL426]
gi|229342475|gb|EEO07468.1| outer membrane protein [Vibrio cholerae TM 11079-80]
gi|229347344|gb|EEO12304.1| outer membrane protein [Vibrio cholerae TMA 21]
gi|262032491|gb|EEY51051.1| outer membrane protein [Vibrio cholerae CT 5369-93]
gi|297536388|gb|EFH75221.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|327483893|gb|AEA78300.1| Outer membrane protein [Vibrio cholerae LMA3894-4]
Length = 223
Score = 74.1 bits (180), Expect = 7e-12, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 54/114 (47%), Gaps = 1/114 (0%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSI 99
+ Q + + + F ++SY + + L + +E D +IEGH D GS ++
Sbjct: 106 ENQLMLRMENGIGFTSNSYQLDSYIHKTLRGVARILVEYPDTSLVIEGHTDSTGSDTTNQ 165
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L +RA +V ++ +++G++A R G+ P + + A NRR + +
Sbjct: 166 VLSEKRAESVRSFLLSQGVAAGRAIARGNGERFPLCSNNTAEGRACNRRVEIQI 219
>gi|325920959|ref|ZP_08182848.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Xanthomonas gardneri ATCC 19865]
gi|325548579|gb|EGD19544.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Xanthomonas gardneri ATCC 19865]
Length = 400
Score = 74.1 bits (180), Expect = 7e-12, Method: Composition-based stats.
Identities = 32/123 (26%), Positives = 47/123 (38%), Gaps = 7/123 (5%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRN 96
+ ++ + + FD IRP +VL L + + + D + GH D GS
Sbjct: 278 PGAPCGYLITLNERILFDFDKAGIRPDAARVLDVLAAALGKVNTKDMQVRGHTDAKGSNA 337
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG-----HDEDAYAKNRRAIV 151
+ AL RRA AV RG A YG+ P + NRR +
Sbjct: 338 YNQALSERRADAVLAALRTRGA-AQSAGAKGYGESQPVAPNTLNGQDNPGGRQLNRRVEI 396
Query: 152 FLK 154
FL+
Sbjct: 397 FLR 399
>gi|315298823|gb|EFU58077.1| OmpA family protein [Escherichia coli MS 16-3]
Length = 550
Score = 74.1 bits (180), Expect = 7e-12, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 2/126 (1%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGH 88
P+ + ++ + + + FD ++ +VL + L + K L+ G+
Sbjct: 414 PPEQKMEVTASLQVQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGY 473
Query: 89 ADELGSRNSSIALGLRRAYAVFNY-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
D G S+ L LRRA AV N+ I A+ V G+ P+ A NR
Sbjct: 474 TDATGDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNR 533
Query: 148 RAIVFL 153
R + L
Sbjct: 534 RVEISL 539
>gi|254787123|ref|YP_003074552.1| flagellar motor protein MotB [Teredinibacter turnerae T7901]
gi|237687385|gb|ACR14649.1| putative chemotaxis protein MotB [Teredinibacter turnerae T7901]
Length = 329
Score = 73.7 bits (179), Expect = 7e-12, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 44/106 (41%), Gaps = 5/106 (4%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG----SRNSSIALGLRRAYAV 109
F + S + P V+ + S L ++GH+D + S+ L RA +V
Sbjct: 180 FVSGSAELAPEYRDVMGEVRSVLTLKPGRIEVQGHSDNIPVRRGRYRSNWELSAARAVSV 239
Query: 110 FNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
++ G +R +V+ + P V + A+NRR + +K
Sbjct: 240 AQELMSGGALPPNRFEVSGFADTRPLVANTTPENRARNRRVEILIK 285
>gi|157889006|dbj|BAF80954.1| fibronectin-binding protein [Campylobacter lari]
Length = 328
Score = 73.7 bits (179), Expect = 7e-12, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGL 103
++ +F SI P Q + +G LE++ + I EGH D GS+ + L L
Sbjct: 215 EKTIALEGYFGFDQISINPEFAQKIQEVGKVLEENPQYYTILEGHTDSTGSKVYNQKLSL 274
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
RA AV G++ ++ YG + P ++ A+NRR
Sbjct: 275 ERAKAVAKELEKSGVAKEKIAAKGYGFDKPKASNDTKEGRAQNRRVE 321
>gi|330814655|ref|YP_004362830.1| type VI secretion system OmpA/MotB family protein [Burkholderia
gladioli BSR3]
gi|327374647|gb|AEA65998.1| type VI secretion system OmpA/MotB family protein [Burkholderia
gladioli BSR3]
Length = 420
Score = 73.7 bits (179), Expect = 7e-12, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 44/127 (34%), Gaps = 4/127 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
++ + + F +I+ A +++ + + K + G+ D
Sbjct: 292 AAGTVSVDEDARHSAVTFRGDAMFPPGGVTIKSAMAPLVAKIAGEIVKVPGKVSVLGYTD 351
Query: 91 ELGSRNSSI----ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
L R+ AL RA V A G+ A+R++ G P A+N
Sbjct: 352 NLPIRSRQFPSNEALSEERATQVLQMLQAAGVPANRLEAVGKGDADPIGDNRTAQGRAQN 411
Query: 147 RRAIVFL 153
RR + +
Sbjct: 412 RRVEIVV 418
>gi|157889011|dbj|BAF80958.1| fibronectin-binding protein [Campylobacter lari]
Length = 328
Score = 73.7 bits (179), Expect = 7e-12, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 1/107 (0%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGL 103
++ F SI P Q + +G LE++ + I EGH D GS+ + L L
Sbjct: 215 EKTIALEGHFGFDQTSINPEFAQKIQEVGKVLEENPQYYTILEGHTDSTGSKTYNQKLSL 274
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
RA AV G++ ++ YG + P ++ A+NRR
Sbjct: 275 ERAKAVAKELEKSGVAKEKIATKGYGFDKPKASNDTKEGRAQNRRVE 321
>gi|37527138|ref|NP_930482.1| hypothetical protein plu3255 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36786572|emb|CAE15629.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 575
Score = 73.7 bits (179), Expect = 7e-12, Method: Composition-based stats.
Identities = 31/114 (27%), Positives = 42/114 (36%), Gaps = 2/114 (1%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIA 100
E + S+ FD ++ +VL N L + K LI GH D G +
Sbjct: 433 EPQTISLNSLALFDVGQAKLKAGSTKVLVNALINIRAKPGWMILIAGHTDSTGDATKNQV 492
Query: 101 LGLRRAYAVFNY-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L L RA AV ++ IS + V G P A NRR + L
Sbjct: 493 LSLARAEAVRDWMLQTSDISPACFTVQGKGATSPIATNTTAAGRAANRRVEIRL 546
>gi|157156833|ref|YP_001464142.1| OmpA domain-containing protein [Escherichia coli E24377A]
gi|157078863|gb|ABV18571.1| OmpA domain protein [Escherichia coli E24377A]
Length = 550
Score = 73.7 bits (179), Expect = 7e-12, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 2/126 (1%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGH 88
P+ + ++ + + + FD ++ +VL + L + K L+ G+
Sbjct: 414 PPEQKMEVTASLQAQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGY 473
Query: 89 ADELGSRNSSIALGLRRAYAVFNY-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
D G S+ L LRRA AV N+ I A+ V G+ P+ A NR
Sbjct: 474 TDATGDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNR 533
Query: 148 RAIVFL 153
R + L
Sbjct: 534 RVEISL 539
>gi|293194233|ref|ZP_06609955.1| outer membrane lipoprotein, OmpA family [Actinomyces odontolyticus
F0309]
gi|292819752|gb|EFF78765.1| outer membrane lipoprotein, OmpA family [Actinomyces odontolyticus
F0309]
Length = 348
Score = 73.7 bits (179), Expect = 7e-12, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 44/118 (37%), Gaps = 8/118 (6%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIAL 101
++ DS+ FD IRP LS L + L I GH D + + L
Sbjct: 229 GTVITLEDSILFDFGESDIRPDAAHTLSKLATVLNDAKVPAAHIYGHTDSVSDEAFNQKL 288
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG------HDEDAYAKNRRAIVFL 153
RA AV + +++ + T YG+ P + A NRR +F+
Sbjct: 289 SEDRANAVSAEL-KKDGASAILDATGYGESKPVAPNENADGSDNPAGRALNRRVEIFI 345
>gi|328470084|gb|EGF40995.1| putative outer membrane protein OmpA [Vibrio parahaemolyticus
10329]
Length = 325
Score = 73.7 bits (179), Expect = 7e-12, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 42/110 (38%), Gaps = 1/110 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+V F S ++ + + I G++D GS + L +RA AV
Sbjct: 212 TVQFGLESAEVK-DASALSGTVDLMNTYPQAKVEITGYSDTTGSAQYNQQLTEKRAKAVA 270
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
N F A+GI+A RM V G+ P NRR V + T
Sbjct: 271 NEFEAKGIAADRMTVKGMGEANPVASNETRQGREANRRVEVVVPAFEYQT 320
>gi|153837108|ref|ZP_01989775.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ3810]
gi|149749696|gb|EDM60441.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ3810]
Length = 325
Score = 73.7 bits (179), Expect = 7e-12, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 42/110 (38%), Gaps = 1/110 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+V F S ++ + + I G++D GS + L +RA AV
Sbjct: 212 TVQFGLESAEVK-DASALSGTVDLMNTYPQAKVEITGYSDTTGSAQYNQQLTEKRAKAVA 270
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
N F A+GI+A RM V G+ P NRR V + T
Sbjct: 271 NEFEAKGIAADRMTVKGMGEANPVASNETRQGREANRRVEVVVPAFEYQT 320
>gi|187919624|ref|YP_001888655.1| OmpA/MotB domain-containing protein [Burkholderia phytofirmans
PsJN]
gi|187718062|gb|ACD19285.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
Length = 320
Score = 73.7 bits (179), Expect = 7e-12, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++ F+T S ++ P +L + + ++ I GH D G+R S+IAL RA
Sbjct: 213 NRTIEFETGSATLTPQGRAILDQMAAAMVKMTTKTVAIIGHTDNSGNRTSNIALSQARAD 272
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
AV Y VA+GI ++ T G + P D A+NRR
Sbjct: 273 AVKGYLVAKGIPPQQLSTTGVGPDQPIASNDTTDGRARNRRIEF 316
>gi|28900103|ref|NP_799758.1| putative outer membrane protein OmpA [Vibrio parahaemolyticus RIMD
2210633]
gi|260365754|ref|ZP_05778250.1| outer membrane protein OmpA [Vibrio parahaemolyticus K5030]
gi|260880676|ref|ZP_05893031.1| outer membrane protein OmpA [Vibrio parahaemolyticus AN-5034]
gi|260897717|ref|ZP_05906213.1| outer membrane protein OmpA [Vibrio parahaemolyticus Peru-466]
gi|260899371|ref|ZP_05907766.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ4037]
gi|28808386|dbj|BAC61591.1| putative outer membrane protein OmpA [Vibrio parahaemolyticus RIMD
2210633]
gi|308086262|gb|EFO35957.1| outer membrane protein OmpA [Vibrio parahaemolyticus Peru-466]
gi|308092198|gb|EFO41893.1| outer membrane protein OmpA [Vibrio parahaemolyticus AN-5034]
gi|308109307|gb|EFO46847.1| outer membrane protein OmpA [Vibrio parahaemolyticus AQ4037]
gi|308114934|gb|EFO52474.1| outer membrane protein OmpA [Vibrio parahaemolyticus K5030]
Length = 325
Score = 73.7 bits (179), Expect = 7e-12, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 42/110 (38%), Gaps = 1/110 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+V F S ++ + + I G++D GS + L +RA AV
Sbjct: 212 TVQFGLESAEVK-DASALSGTVDLMNTYPQAKVEITGYSDTTGSAQYNQQLTEKRAKAVA 270
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
N F A+GI+A RM V G+ P NRR V + T
Sbjct: 271 NEFEAKGIAADRMTVKGMGEANPVASNETRQGREANRRVEVVVPAFEYQT 320
>gi|327405440|ref|YP_004346278.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
16823]
gi|327320948|gb|AEA45440.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
Length = 367
Score = 73.7 bits (179), Expect = 7e-12, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Query: 48 VGDSVFFDTSSYSIRPADIQVL-SNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
V ++ F++ + P + L + + + + L+ GH D +G++ + L L RA
Sbjct: 259 VLHNLQFESGKSILLPNEYPELENFIRHVEKYPNQTLLVTGHTDNVGNKGDNKMLSLERA 318
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
A+ Y VA+GI+ +++ + G E+P E+ KNRR + +
Sbjct: 319 NAIKQYLVAKGINKNKIVIEGKGDEIPLDSNETEEGRKKNRRVEISI 365
>gi|53804092|ref|YP_114257.1| OmpA domain-containing protein [Methylococcus capsulatus str. Bath]
gi|53757853|gb|AAU92144.1| OmpA domain protein [Methylococcus capsulatus str. Bath]
Length = 179
Score = 73.7 bits (179), Expect = 7e-12, Method: Composition-based stats.
Identities = 29/171 (16%), Positives = 54/171 (31%), Gaps = 20/171 (11%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTK------------ISSPDTVLNESSLQEQFSSSV 48
M +L+A + D + L+++ ++
Sbjct: 1 MVKKFATTVLTAGVLSGCVMQSTYDRDVGYERQLNEQLRTEVEADEVKIQQLRDRLRVTM 60
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEK-HDCDFLIEGHADELGSRNS-------SIA 100
D + F Y I + + L+ + +EGH D + +
Sbjct: 61 EDELLFPEGGYQISKEGKASIDKIIPTLQSATNHRIEVEGHTDNVPIGKHLAHRFSSNWE 120
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
L RA V Y ++GI +RM +G+ P + A+NRR +
Sbjct: 121 LSAGRACEVVKYLQSKGIDPARMTAAGHGEYQPVASNATAEGKAQNRRIDI 171
>gi|327187191|dbj|BAK08930.1| B-subunit of channel/stator unit of Na(+)-driven flagellar motor
[Bacillus pseudofirmus]
Length = 252
Score = 73.7 bits (179), Expect = 7e-12, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 48/133 (36%), Gaps = 5/133 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+++ + V++ + + + F+T+ + + L +G+ L +E
Sbjct: 110 EVNEMNDVISATRDDRGVVLVLQERTLFETAEAELLDSAEPFLEKVGTLLSAIPNMVKVE 169
Query: 87 GHADELGS----RNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDED 141
GH D S+ L RA +V Y + R T YG P V +
Sbjct: 170 GHTDSRPISNFRYPSNWELSGARASSVIRYLVETNDLDPKRFIATGYGDTRPVVPNTTVE 229
Query: 142 AYAKNRRAIVFLK 154
NRR ++ +
Sbjct: 230 NLQLNRRVVIVIS 242
>gi|327187188|dbj|BAK08928.1| B-subunit of channel/stator unit of Na(+)-driven flagellar motor
[Bacillus pseudofirmus]
Length = 252
Score = 73.7 bits (179), Expect = 7e-12, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 48/133 (36%), Gaps = 5/133 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+++ + V++ + + + F+T+ + + L +G+ L +E
Sbjct: 110 EVNEMNDVISATRDDRGVVLVLQERTLFETAEAELLDSAEPFLEKVGTLLSAIPNMVKVE 169
Query: 87 GHADELGS----RNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDED 141
GH D S+ L RA +V Y + R T YG P V +
Sbjct: 170 GHTDSRPISNFRYPSNWELSGARASSVIRYLVETNDLDPKRFIATGYGDTRPVVPNTTVE 229
Query: 142 AYAKNRRAIVFLK 154
NRR ++ +
Sbjct: 230 NLQLNRRVVIVIS 242
>gi|320182433|gb|EFW57330.1| Putative outer membrane lipoprotein [Shigella boydii ATCC 9905]
Length = 550
Score = 73.7 bits (179), Expect = 7e-12, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 2/126 (1%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGH 88
P+ + ++ + + + FD ++ +VL + L + K L+ G+
Sbjct: 414 PPEQKMEVTASLQAQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGY 473
Query: 89 ADELGSRNSSIALGLRRAYAVFNY-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
D G S+ L LRRA AV N+ I A+ V G+ P+ A NR
Sbjct: 474 TDATGDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNR 533
Query: 148 RAIVFL 153
R + L
Sbjct: 534 RVEISL 539
>gi|320536711|ref|ZP_08036721.1| OmpA family protein [Treponema phagedenis F0421]
gi|320146448|gb|EFW38054.1| OmpA family protein [Treponema phagedenis F0421]
Length = 412
Score = 73.7 bits (179), Expect = 7e-12, Method: Composition-based stats.
Identities = 31/165 (18%), Positives = 55/165 (33%), Gaps = 13/165 (7%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPD----------TVLNESSLQEQFSSSVGD 50
M S + I+ LD + D S E + S+ +
Sbjct: 246 MLNSGRTLTYEGTASAEITETKKLDKAAVAEDLTQKIEELGIENTTISQTDEGITISI-E 304
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAV 109
++ F+ S + ++ + L +G L+ LI GH G+ L RA +V
Sbjct: 305 NIQFEADSARLLSSEKEKLQKIGRLLQGFPDKELLISGHTALRGTAAERQKLSEERADSV 364
Query: 110 FNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
Y + +G P +E+ A+NRR + +
Sbjct: 365 ARYLEEIGIRDTQHLYTRGFGARRPLAPNTNEENRARNRRVEITI 409
>gi|308186535|ref|YP_003930666.1| type VI secretion system, core protein [Pantoea vagans C9-1]
gi|308057045|gb|ADO09217.1| Putative type VI secretion system, core protein [Pantoea vagans
C9-1]
Length = 412
Score = 73.7 bits (179), Expect = 7e-12, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 50/131 (38%), Gaps = 4/131 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
K ++ ++ ++ F +++ +R I V+ + + + +
Sbjct: 264 KPEIDAGLVAVRDEADRSVVTLKGDGLFASAATEVRGGYIDVIRRIAAAMNNVSGQIQVI 323
Query: 87 GHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
G++D + S+ L L RA +V + SR+K G+ P V +
Sbjct: 324 GYSDNVPIRSARFASNFELSLARARSVQTLLQQQLAQPSRVKAEGRGESNPLVPNTSAEN 383
Query: 143 YAKNRRAIVFL 153
A+NRR + L
Sbjct: 384 RARNRRVEITL 394
>gi|331658933|ref|ZP_08359875.1| OmpA family of outer membrane porins [Escherichia coli TA206]
gi|331053515|gb|EGI25544.1| OmpA family of outer membrane porins [Escherichia coli TA206]
Length = 550
Score = 73.7 bits (179), Expect = 7e-12, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 2/126 (1%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGH 88
P+ + ++ + + + FD ++ +VL + L + K L+ G+
Sbjct: 414 PPEQKMEVTASLQVQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGY 473
Query: 89 ADELGSRNSSIALGLRRAYAVFNY-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
D G S+ L LRRA AV N+ I A+ V G+ P+ A NR
Sbjct: 474 TDATGDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNR 533
Query: 148 RAIVFL 153
R + L
Sbjct: 534 RVEISL 539
>gi|258513971|ref|YP_003190193.1| OmpA/MotB domain-containing protein [Desulfotomaculum acetoxidans
DSM 771]
gi|257777676|gb|ACV61570.1| OmpA/MotB domain protein [Desulfotomaculum acetoxidans DSM 771]
Length = 275
Score = 73.7 bits (179), Expect = 7e-12, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 43/122 (35%), Gaps = 5/122 (4%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD----ELGSRN 96
+ S D V F S + P ++ +G L K D IEGH D
Sbjct: 118 ERGLVVSFLDPVLFPLGSAQLTPKAKNIVQEVGQILLKSDNYIRIEGHTDDIPINTAIYP 177
Query: 97 SSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
S+ L RA +V + R+ T YG+ P V D NRR + +
Sbjct: 178 SNWELSAARATSVVQELIKTMSFPPERLAATGYGEYRPRVPNDSMDHKQMNRRVDIVVVR 237
Query: 156 CR 157
+
Sbjct: 238 SK 239
>gi|167589254|ref|ZP_02381642.1| OmpA/MotB domain protein [Burkholderia ubonensis Bu]
Length = 246
Score = 73.7 bits (179), Expect = 7e-12, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++ F+T S ++ P VL + + + + + GH D G+R S+IAL RA
Sbjct: 139 NRTIEFETGSATLTPQGKVVLDQMAAALSKMPNRTVDLIGHTDNSGNRASNIALSQARAD 198
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV Y + +GI++ +M T G + P + A+NRR +
Sbjct: 199 AVKGYLITKGIASQQMTTTGVGPDQPIAPNDTAEGRARNRRIDFRV 244
>gi|303240559|ref|ZP_07327075.1| OmpA/MotB domain protein [Acetivibrio cellulolyticus CD2]
gi|302591961|gb|EFL61693.1| OmpA/MotB domain protein [Acetivibrio cellulolyticus CD2]
Length = 556
Score = 73.7 bits (179), Expect = 7e-12, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 59/139 (42%), Gaps = 3/139 (2%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW- 75
S S + + D E + + + V++D+ +++ I VL+ +
Sbjct: 414 SASQAEEKKKEFKQQDAQSIEKNTERVAKVDIP-PVYYDSGKATVKAESIAVLNQVKEML 472
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+ + +I+ H D +G+ +++ L RA V Y V +G+ R+ +G++ P V
Sbjct: 473 SQFPEYYLIIDAHTDTVGNNENNLKLSKDRADEVKKYLVQKGVDEKRIIARGWGEDRPIV 532
Query: 136 Y-GHDEDAYAKNRRAIVFL 153
E AKNRR L
Sbjct: 533 PKESTEGDKAKNRRTEFIL 551
>gi|239905020|ref|YP_002951759.1| hypothetical protein DMR_03820 [Desulfovibrio magneticus RS-1]
gi|239794884|dbj|BAH73873.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 424
Score = 73.7 bits (179), Expect = 7e-12, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 6/118 (5%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSR----N 96
E+ + D + F + S I P +L+ + + D + GH D +
Sbjct: 106 EKLEINFVDKILFPSGSAEISPRGRDILTRVGAVLAKVKDKSIYVVGHTDNVPIHSALFP 165
Query: 97 SSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA +V + G + R P + +NRR + +
Sbjct: 166 SNWELSASRAASVIRHLSESGGLAPERFTAMGRAFYQPVASNATPEGRQENRRVDIIV 223
>gi|167740414|ref|ZP_02413188.1| ompA family protein [Burkholderia pseudomallei 14]
Length = 245
Score = 73.7 bits (179), Expect = 7e-12, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++ F+T S ++ P +L + + + I GH D G+R S+IAL RA
Sbjct: 138 NRTIEFETGSATLTPQGRAILDQMAGALAKMSNRTVEIIGHTDNSGNRTSNIALSQARAD 197
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
AV Y V +GI++ ++ T G + P D A+NRR
Sbjct: 198 AVKGYLVTKGIASQQLTTTGVGPDQPIAPNDSADGRARNRRIEF 241
>gi|218778865|ref|YP_002430183.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01]
gi|218760249|gb|ACL02715.1| OmpA/MotB domain-containing protein [Desulfatibacillum alkenivorans
AK-01]
Length = 259
Score = 73.7 bits (179), Expect = 7e-12, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 52/143 (36%), Gaps = 5/143 (3%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
+++ D + + + + + ++V FD S IRP +L L
Sbjct: 115 LTVRSRDVVKQLTERYTDQIYVNEDERGVVLTFDETVMFDPGSSRIRPEIYPLLDVLAQV 174
Query: 76 LEKHDCDFLIEGHADELGSR----NSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGK 130
L+ LI GH+D +S+ L L RA V YF + R+ V G
Sbjct: 175 LKAVSGRVLIIGHSDSTPMHSVQYDSNWDLSLSRALNVLYYFTTEHDLSEDRLGVGGMGN 234
Query: 131 EMPSVYGHDEDAYAKNRRAIVFL 153
P + KNRR + +
Sbjct: 235 TKPIASNKTQAGRDKNRRVEIVI 257
>gi|90414007|ref|ZP_01221991.1| hypothetical outer membrane protein OmpA [Photobacterium profundum
3TCK]
gi|90324929|gb|EAS41450.1| hypothetical outer membrane protein OmpA [Photobacterium profundum
3TCK]
Length = 327
Score = 73.7 bits (179), Expect = 7e-12, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 38/101 (37%), Gaps = 2/101 (1%)
Query: 54 FDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F S ++ DI L + + + + + GH D G+ + L RA V Y
Sbjct: 218 FAFDSDTLSQQDIDQLQPIAQRLVNFPETELFVIGHTDSRGAEAYNQNLSEERAAVVAGY 277
Query: 113 FVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
R++ G+ P ED A+NRR VF
Sbjct: 278 LATHFGIEQSRIQAQGRGELEPVAANDTEDGRAQNRRVEVF 318
>gi|85710723|ref|ZP_01041787.1| probable peptidoglycan-associated lipoprotein precursor
[Erythrobacter sp. NAP1]
gi|85687901|gb|EAQ27906.1| probable peptidoglycan-associated lipoprotein precursor
[Erythrobacter sp. NAP1]
Length = 210
Score = 73.7 bits (179), Expect = 7e-12, Method: Composition-based stats.
Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 16/168 (9%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKISSPDTVL------------NESSLQEQFSSSVG 49
+ +T+ ++ SA+ + + S + + T Q F ++VG
Sbjct: 42 KAATVALMTSALALGACSKKAPEELPPAPVSTPTPAPAPAPTAPTGPVPGTQGHFEAAVG 101
Query: 50 DSVFFDTSSYSIRPADIQVLSNLG---SWLEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
S + + + F IEGH DE G+R ++ALG RRA
Sbjct: 102 SSSVIYFDTDRFNIDSTDAAALQAQAQYFARFPQLTFTIEGHCDERGTREYNLALGERRA 161
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR-AIVFL 153
A NY V+ G+S +R++ SYGKE P A+++NRR A + +
Sbjct: 162 NAAKNYLVSLGVSPNRIRTVSYGKERPVALASTPAAWSQNRRAASIII 209
>gi|332087513|gb|EGI92641.1| ompA family protein [Shigella boydii 5216-82]
Length = 318
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 2/126 (1%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGH 88
P+ + ++ + + + FD ++ +VL + L + K L+ G+
Sbjct: 182 PPEQKMEVTASLQAQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGY 241
Query: 89 ADELGSRNSSIALGLRRAYAVFNY-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
D G S+ L LRRA AV N+ I A+ V G+ P+ A NR
Sbjct: 242 TDATGDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNR 301
Query: 148 RAIVFL 153
R + L
Sbjct: 302 RVEISL 307
>gi|296104273|ref|YP_003614419.1| putative outer membrane lipoprotein [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295058732|gb|ADF63470.1| putative outer membrane lipoprotein [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 161
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 58/150 (38%), Gaps = 7/150 (4%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLN-----ESSLQEQFSSSVGDSVFFDTSSYSIRPADI 66
+ M ++G + SP+ + + L +S + D++ FD + +RP
Sbjct: 10 FLASMVLTGCQSPPEGKFSPEQIAAMKSYGFNELNGDWSLGLSDTILFDKNDARLRPESE 69
Query: 67 QVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMK 124
+ + S L ++GH D G + + AL L+RA AV + + +
Sbjct: 70 AQIRTMASRLAATGLKHARMDGHTDNYGEESYNEALSLKRANAVADVWAKGANIPRSNLT 129
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
GK+ P A+NRR V +
Sbjct: 130 TQGLGKKYPVSSNSTAQGRAENRRVAVVIS 159
>gi|167847521|ref|ZP_02473029.1| ompA family protein [Burkholderia pseudomallei B7210]
Length = 249
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++ F+T S ++ P +L + + + I GH D G+R S+IAL RA
Sbjct: 142 NRTIEFETGSATLTPQGRAILDQMAGALAKMSNRTVEIIGHTDNSGNRTSNIALSQARAD 201
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
AV Y V +GI++ ++ T G + P D A+NRR
Sbjct: 202 AVKGYLVTKGIASQQLTTTGVGPDQPIAPNDSADGRARNRRIEF 245
>gi|322383007|ref|ZP_08056837.1| MotS-like protein [Paenibacillus larvae subsp. larvae B-3650]
gi|321153030|gb|EFX45490.1| MotS-like protein [Paenibacillus larvae subsp. larvae B-3650]
Length = 254
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 47/130 (36%), Gaps = 8/130 (6%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ + + + S ++ D FD ++P VL+ L S D IEGH D
Sbjct: 123 EAQIAVGNSERGVSVTLKDLFLFDLGKAELKPEAYPVLNKLASLFPTLDTKISIEGHTDN 182
Query: 92 LG-----SRNSSIALGLRRAYAVFNYFVARGISAS---RMKVTSYGKEMPSVYGHDEDAY 143
+ + L R+ +V YF + + T Y +P +
Sbjct: 183 IPVRTGSPFQDNWGLSNARSLSVLRYFTTKADPKISDSKFMSTGYADTIPVAPNDSMENR 242
Query: 144 AKNRRAIVFL 153
AKNRR + +
Sbjct: 243 AKNRRVEIVI 252
>gi|309796906|ref|ZP_07691307.1| OmpA family protein [Escherichia coli MS 145-7]
gi|308119434|gb|EFO56696.1| OmpA family protein [Escherichia coli MS 145-7]
Length = 550
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 2/126 (1%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGH 88
P+ + ++ + + + FD ++ +VL + L + K L+ G+
Sbjct: 414 PPEQKMEVTASLQAQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGY 473
Query: 89 ADELGSRNSSIALGLRRAYAVFNY-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
D G S+ L LRRA AV N+ I A+ V G+ P+ A NR
Sbjct: 474 TDATGDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNR 533
Query: 148 RAIVFL 153
R + L
Sbjct: 534 RVEISL 539
>gi|258404712|ref|YP_003197454.1| OmpA/MotB domain-containing protein [Desulfohalobium retbaense DSM
5692]
gi|257796939|gb|ACV67876.1| OmpA/MotB domain protein [Desulfohalobium retbaense DSM 5692]
Length = 248
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 50/115 (43%), Gaps = 4/115 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNS---SIA 100
+ DS+ FD+ +++P +L + + D +EGH D + +
Sbjct: 113 VVLRLNDSLLFDSGETALKPRAAPLLREVAQLVRPLHLDMRVEGHTDNVPVSRPGISNWD 172
Query: 101 LGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ + RA +V + +R + SR+ YG + P V + AKNRR +L+
Sbjct: 173 ISIERAVSVVKFLTSRDLLPPSRLSAAGYGDQRPLVRNDSPENRAKNRRVDFYLE 227
>gi|157889051|dbj|BAF80990.1| fibronectin-binding protein [Campylobacter lari]
Length = 328
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 1/107 (0%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGL 103
++ F +I P Q + +G LE++ + I EGH D G + + L L
Sbjct: 215 EKTIALEGHFGFDQTNINPEFAQKIQEVGKILEENPQYYTILEGHTDSTGPKAYNQKLSL 274
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
RA AV G++ ++ YG E P ++ A+NRR
Sbjct: 275 ERANAVAKELEKTGVAKEKIVTKGYGFEKPKASNDTKEGRAQNRRVE 321
>gi|157889046|dbj|BAF80986.1| fibronectin-binding protein [Campylobacter lari]
Length = 328
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 1/107 (0%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGL 103
++ F +I P Q + +G LE++ + I EGH D G + + L L
Sbjct: 215 EKTIALEGHFGFDQTNINPEFAQKIQEVGKILEENPQYYTILEGHTDSTGPKAYNQKLSL 274
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
RA AV G++ ++ YG E P ++ A+NRR
Sbjct: 275 ERANAVAKELEKTGVAKEKIVTKGYGFEKPKASNDTKEGRAQNRRVE 321
>gi|157889041|dbj|BAF80982.1| fibronectin-binding protein [Campylobacter lari]
Length = 328
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 1/107 (0%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGL 103
++ F +I P Q + +G LE++ + I EGH D G + + L L
Sbjct: 215 EKTIALEGHFGFDQTNINPEFAQKIQEVGKILEENPQYYTILEGHTDSTGPKAYNQKLSL 274
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
RA AV G++ ++ YG E P ++ A+NRR
Sbjct: 275 ERANAVAKELEKTGVAKEKIVTKGYGFEKPKASNDTKEGRAQNRRVE 321
>gi|157889031|dbj|BAF80974.1| fibronectin-binding protein [Campylobacter lari]
gi|157889036|dbj|BAF80978.1| fibronectin-binding protein [Campylobacter lari]
Length = 328
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 1/107 (0%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGL 103
++ F +I P Q + +G LE++ + I EGH D G + + L L
Sbjct: 215 EKTIALEGHFGFDQTNINPEFAQKIQEVGKILEENPQYYTILEGHTDSTGPKAYNQKLSL 274
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
RA AV G++ ++ YG E P ++ A+NRR
Sbjct: 275 ERANAVAKELEKTGVAKEKIVTKGYGFEKPKASNDTKEGRAQNRRVE 321
>gi|157889016|dbj|BAF80962.1| fibronectin-binding protein [Campylobacter lari]
Length = 328
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 1/107 (0%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGL 103
++ +F SI P Q + +G LE++ + I EGH D GS+ + L L
Sbjct: 215 EKTIALEGYFGFDQISINPEFAQKIQEVGKVLEENPQYYTILEGHTDSTGSKTYNQKLSL 274
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
RA AV G+ ++ YG + P ++ A+NRR
Sbjct: 275 ERAKAVAKELEKSGVVKEKIATKGYGFDKPKASNDTKEGRAQNRRVE 321
>gi|83854895|ref|ZP_00948425.1| OmpA domain protein [Sulfitobacter sp. NAS-14.1]
gi|83842738|gb|EAP81905.1| OmpA domain protein [Sulfitobacter sp. NAS-14.1]
Length = 632
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 43/120 (35%), Gaps = 1/120 (0%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELG 93
+ E + F+ S +I + + + + L+ ++G+ D G
Sbjct: 479 TPQECEAEIGKVVAKGKINFEPGSATIDASTLGTMDQIAEILQDCRDIALEVQGYTDSQG 538
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++AL RA +V N AR + YG+E P E+ NRR L
Sbjct: 539 REEMNLALSQSRAQSVLNELRARRVITGSFVAKGYGEESPVASNDTEEGREANRRIEFKL 598
>gi|331684442|ref|ZP_08385034.1| putative OmpA-family membrane protein [Escherichia coli H299]
gi|331078057|gb|EGI49263.1| putative OmpA-family membrane protein [Escherichia coli H299]
Length = 550
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 2/126 (1%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGH 88
P+ + ++ + + + FD ++ +VL + L + K L+ G+
Sbjct: 414 PPEQKMEVTASLQAQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGY 473
Query: 89 ADELGSRNSSIALGLRRAYAVFNY-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
D G S+ L LRRA AV N+ I A+ V G+ P+ A NR
Sbjct: 474 TDATGDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNR 533
Query: 148 RAIVFL 153
R + L
Sbjct: 534 RVEISL 539
>gi|225012050|ref|ZP_03702487.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A]
gi|225003605|gb|EEG41578.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A]
Length = 299
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 55/135 (40%), Gaps = 1/135 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
G+ + + + +S + + F+T + + L + S ++
Sbjct: 163 GLATFNGYPDTDGDGIQDSQDDCPQIPGLIQLILFETDQDILTEEALISLEEVYSILIQY 222
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ + ++EGH D+ G N + L + V + + RGIS+S++K +YG+ P
Sbjct: 223 PNLNIIVEGHTDDTGGVNYNQELSEKIVATVLRFLINRGISSSKIKSAAYGETRPLRTNS 282
Query: 139 DEDAYAKNRRAIVFL 153
+ NRR +
Sbjct: 283 TSEGRRYNRRVQFNI 297
>gi|313674269|ref|YP_004052265.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
gi|312940967|gb|ADR20157.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
Length = 526
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 52/137 (37%), Gaps = 6/137 (4%)
Query: 22 DNLDTKISSPDTVLNES----SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-L 76
D K S + SL+E + + SV F + I+ + L + +
Sbjct: 388 DKQTIKTDSIEDNSTVKLELLSLKEGTTIQLK-SVLFKRGTSEIKDGSFEELDRVYTMLK 446
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ + + GH D GS +I L +R+ + Y V +GI+ R++ YG P
Sbjct: 447 KNPTVEIELAGHTDNTGSAKLNIELSQKRSDKIKEYLVEKGINPKRLQSKGYGGARPIAS 506
Query: 137 GHDEDAYAKNRRAIVFL 153
E NRR +
Sbjct: 507 NKSEATRKLNRRVEFTI 523
>gi|237748798|ref|ZP_04579278.1| peptidoglycan-associated lipoprotein [Oxalobacter formigenes
OXCC13]
gi|229380160|gb|EEO30251.1| peptidoglycan-associated lipoprotein [Oxalobacter formigenes
OXCC13]
Length = 169
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 41/167 (24%), Positives = 74/167 (44%), Gaps = 20/167 (11%)
Query: 6 IFIILSAITMMSISGIDNLDTKISSPDT-------------------VLNESSLQEQFSS 46
+ +I+S +++ G + + + + L +
Sbjct: 1 MVVIVSGALILTACGSSVKLDENAPVEDKSASGSSSSMDSRQVGTVTAGSLDPLNDPKGE 60
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRR 105
SV+FD S+ + V+ +L H D +I+G+ D+ G R ++ALG +R
Sbjct: 61 LAQRSVYFDFDSFVVSSQYEPVVQAHAKYLNSHKDRKVVIQGNTDDRGGREYNLALGQKR 120
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
A AV G+S S+++ S+GKE P G++E A+A+NRRA +
Sbjct: 121 AEAVRKSMNLMGVSDSQIEAVSFGKEKPKATGNNEAAWAENRRADIV 167
>gi|167896107|ref|ZP_02483509.1| ompA family protein [Burkholderia pseudomallei 7894]
Length = 243
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++ F+T S ++ P +L + + + I GH D G+R S+IAL RA
Sbjct: 136 NRTIEFETGSATLTPQGRAILDQMAGALAKMSNRTVEIIGHTDNSGNRTSNIALSQARAD 195
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
AV Y V +GI++ ++ T G + P D A+NRR
Sbjct: 196 AVKGYLVTKGIASQQLTTTGVGPDQPIAPNDSADGRARNRRIEF 239
>gi|163942243|ref|YP_001647127.1| flagellar motor protein MotB [Bacillus weihenstephanensis KBAB4]
gi|163864440|gb|ABY45499.1| OmpA/MotB domain protein [Bacillus weihenstephanensis KBAB4]
Length = 261
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 18/120 (15%), Positives = 43/120 (35%), Gaps = 6/120 (5%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSS 98
++ ++ ++V FD+ ++ + + + + + + + GH D + N+
Sbjct: 134 TEKGLMVTILENVLFDSGKADVKLESLGIAKEMSNLLVSASPREITVSGHTDNVPISNAQ 193
Query: 99 IALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
A R + + + + YG+ + AKNRR VF+
Sbjct: 194 FASNWELSTQRAVNFMQVLLQNKELQPEKFSAVGYGEYRSIAPNDTPEGKAKNRRVEVFI 253
>gi|83748126|ref|ZP_00945154.1| Hypothetical Protein RRSL_01752 [Ralstonia solanacearum UW551]
gi|207739125|ref|YP_002257518.1| outer membrane protein [Ralstonia solanacearum IPO1609]
gi|83725208|gb|EAP72358.1| Hypothetical Protein RRSL_01752 [Ralstonia solanacearum UW551]
gi|206592498|emb|CAQ59404.1| outer membrane protein [Ralstonia solanacearum IPO1609]
Length = 277
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 50/120 (41%), Gaps = 3/120 (2%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADE 91
++E SL +Q + + F+T S ++ P +L + + + I GH D
Sbjct: 156 AAVSEQSLLDQTLA--NRIIEFETGSATLTPKGRGILDEMAAVLPRLNGRKIEIVGHTDN 213
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
GSR ++ L RA V +Y + +G + G + P ++ ++NRR
Sbjct: 214 SGSRAMNLNLSQARAETVKSYLINKGAEPGTLTAIGVGPDQPVAANTTDEGRSRNRRIEF 273
>gi|126740854|ref|ZP_01756539.1| OmpA domain protein [Roseobacter sp. SK209-2-6]
gi|126718150|gb|EBA14867.1| OmpA domain protein [Roseobacter sp. SK209-2-6]
Length = 308
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 38/152 (25%), Positives = 61/152 (40%), Gaps = 5/152 (3%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSS---VGDSVFFDTSSYSIRPADIQ 67
A + ++S + + + K S D SL Q + + + + F + S + +Q
Sbjct: 157 PAASSPNLSEVSDEEAKPDSGDHQSEALSLSSQLLAEGHVILEGLVFKSGSVRLGQRAVQ 216
Query: 68 VLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKV 125
L L +L+ H LI GH D +GS S+ +L RRA AV + + R++
Sbjct: 217 SLEELAQFLKDHPEARVLIVGHTDSVGSLASNRSLSERRAEAVRGALIENSGIDNARVQA 276
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
T G P KNRR L +
Sbjct: 277 TGVGYAAPIASNLSPAGREKNRRVEAVLLSSK 308
>gi|207724483|ref|YP_002254880.1| outer membrane protein [Ralstonia solanacearum MolK2]
gi|206589704|emb|CAQ36665.1| outer membrane protein [Ralstonia solanacearum MolK2]
Length = 277
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 50/120 (41%), Gaps = 3/120 (2%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADE 91
++E SL +Q + + F+T S ++ P +L + + + I GH D
Sbjct: 156 AAVSEQSLLDQTLA--NRIIEFETGSATLTPKGRGILDEMAAVLPRLNGRKIEIVGHTDN 213
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
GSR ++ L RA V +Y + +G + G + P ++ ++NRR
Sbjct: 214 SGSRAMNLNLSQARAETVKSYLINKGAEPGTLTAIGVGPDQPVAANTTDEGRSRNRRIEF 273
>gi|152971688|ref|YP_001336797.1| hypothetical protein KPN_03169 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|150956537|gb|ABR78567.1| hypothetical protein KPN_03169 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
Length = 567
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 51/126 (40%), Gaps = 2/126 (1%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGH 88
P+ + + S + FD ++ +VL N L + + ++ G+
Sbjct: 411 PPEKKRDVADALPVQSVRLDSMALFDVGQARLKDGSTKVLINALVNIRARPGWLIVVTGY 470
Query: 89 ADELGSRNSSIALGLRRAYAVFNY-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
D G++ ++ L LRRA AV ++ I A+ V G+ P+ + A NR
Sbjct: 471 TDTTGNKKANQQLSLRRAEAVRDWMLQTSDIPATFFAVQGLGESHPAATNDTPEGRAANR 530
Query: 148 RAIVFL 153
R + L
Sbjct: 531 RVEISL 536
>gi|167721446|ref|ZP_02404682.1| ompA family protein [Burkholderia pseudomallei DM98]
Length = 243
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAY 107
++ F+T S ++ P +L + L K I GH D G+R S+IAL RA
Sbjct: 136 NRTIEFETGSATLTPQGRAILDQMAGALAKMSSRTVEIIGHTDNSGNRTSNIALSQARAD 195
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
AV Y V +GI++ ++ T G + P D A+NRR
Sbjct: 196 AVKGYLVTKGIASQQLTTTGVGPDQPIAPNDSADGRARNRRIEF 239
>gi|153834734|ref|ZP_01987401.1| inner membrane lipoprotein YiaD [Vibrio harveyi HY01]
gi|148868823|gb|EDL67889.1| inner membrane lipoprotein YiaD [Vibrio harveyi HY01]
Length = 222
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
V E + Q + + + F +SSY + + L + +E D +I+G+ D
Sbjct: 96 SGVQVERVGENQLLLRMENGIGFSSSSYQLDSSIHNTLRGVARILVEYPDTSLVIDGYTD 155
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + + L RRA +V Y V++ ++ R YG+ P + A NRR
Sbjct: 156 STGSDSYNQTLSERRAESVRQYLVSQNVAPGRAIARGYGERNPICSNQTSEGRACNRRVE 215
Query: 151 VFL 153
+ +
Sbjct: 216 IQI 218
>gi|221066746|ref|ZP_03542851.1| OmpA/MotB domain protein [Comamonas testosteroni KF-1]
gi|220711769|gb|EED67137.1| OmpA/MotB domain protein [Comamonas testosteroni KF-1]
Length = 170
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 38/160 (23%), Positives = 68/160 (42%), Gaps = 11/160 (6%)
Query: 6 IFIILSAITMMSISGIDNLD----------TKISSPDTVLNESSLQEQFSSSVGDSVFFD 55
+ + L I S + + S ++ S ++ ++ V+FD
Sbjct: 11 LLLSLGLIACSSAPTSNKTSHHYAYGRPTVSTASGVAPIVATSQSGKKGPANAAHIVYFD 70
Query: 56 TSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
SY++RP+D ++ + W+ + ++ GH D G ++ALG +R+ +V
Sbjct: 71 FDSYTVRPSDRGIVESHAQWMRNNPRQALILRGHTDSRGGTEYNLALGQKRSESVLQSLQ 130
Query: 115 ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
GI SR++ SYGKE G DA+ NRR +
Sbjct: 131 ILGIDPSRVEAISYGKERLVDLGSSNDAHQLNRRVEFEYR 170
>gi|78061292|ref|YP_371200.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383]
gi|77969177|gb|ABB10556.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
Length = 220
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 46/111 (41%), Gaps = 1/111 (0%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGL 103
++ F T ++ P + L L S H + G D +GS + ++AL
Sbjct: 109 QVNLSGDALFATDHATLAPTARESLDRLLSERADHTYSQVSVTGFTDSVGSDDYNLALSK 168
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RRA +V Y A G+ + VT GK P + A NRR + L+
Sbjct: 169 RRAESVATYLKAHGLKTDSLTVTGRGKADPVASNATPEGRASNRRVEIRLQ 219
>gi|317011324|gb|ADU85071.1| peptidoglycan-associated lipoprotein precursor [Helicobacter pylori
SouthAfrica7]
Length = 182
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 35/180 (19%), Positives = 71/180 (39%), Gaps = 27/180 (15%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSS-------------- 46
M+ ++F + A +++ + ++ + +
Sbjct: 1 MKRFSVFSFVVAFLLIAGCKHNMDKETVAGDVSAKTVQTAPVTTEPAPEKEEPKEEPVPV 60
Query: 47 -------------SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG 93
++ S++FD Y I+ +D + L + +++ L+EG+ DE G
Sbjct: 61 VEEKPAKPAIESGTIIASIYFDFDKYEIKDSDQETLDEIVQKAKENHMQVLLEGNTDEFG 120
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + ALG++R +V N V +G+ +K S+G+ P + Y +NRR V L
Sbjct: 121 SSEYNQALGVKRTLSVKNALVIKGVEKDMIKTISFGEAKPKCTQKTRECYKENRRVDVKL 180
>gi|288919975|ref|ZP_06414296.1| OmpA/MotB domain protein [Frankia sp. EUN1f]
gi|288348628|gb|EFC82884.1| OmpA/MotB domain protein [Frankia sp. EUN1f]
Length = 212
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 46/130 (35%), Gaps = 6/130 (4%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEG 87
+ + E +Q ++ V F S + ++ L + + G
Sbjct: 78 ADAVSPLHTEERRDDQVVVTISADVLFAFDSADLTDVARAEITKLAPRVRPGTETVTVLG 137
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG------HDED 141
H D+LG+ ++ L RRA AV + + +R+ T G P D D
Sbjct: 138 HTDKLGTPAYNVMLSQRRADAVAGVLRSLLPAGTRVSATGRGGADPVTPNSHPDGSDDPD 197
Query: 142 AYAKNRRAIV 151
A NRR +
Sbjct: 198 GRALNRRVQI 207
>gi|294504689|ref|YP_003568751.1| putative OmpA family protein [Yersinia pestis Z176003]
gi|262362751|gb|ACY59472.1| putative OmpA family protein [Yersinia pestis D106004]
gi|294355148|gb|ADE65489.1| putative OmpA family protein [Yersinia pestis Z176003]
Length = 186
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 43/123 (34%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
++ F S ++RP I V+ + + + LI GH D +
Sbjct: 62 VSVDETSNNSKVIFKGDSMFMVGSDNVRPEMIDVIKRVAQEVHRVKGAILIVGHTDSMPI 121
Query: 95 RNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
L +RA V Y GI +++ G+ P D ++NRR
Sbjct: 122 NKPGFPNNQVLSEKRAANVARYMEQAGIPTDKIRFEGKGETQPVSSNDDATGRSQNRRVE 181
Query: 151 VFL 153
+F+
Sbjct: 182 IFV 184
>gi|126737253|ref|ZP_01752988.1| OmpA family protein [Roseobacter sp. SK209-2-6]
gi|126721838|gb|EBA18541.1| OmpA family protein [Roseobacter sp. SK209-2-6]
Length = 210
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 38/170 (22%), Positives = 69/170 (40%), Gaps = 17/170 (10%)
Query: 1 MQYSTIFIILSAITMMSIS-------------GIDNLDTKISSPDTVLNESSLQEQFSSS 47
M+ +T+ + A ++ + + G + + L ++F+
Sbjct: 3 MKRTTLLGLGLAFSLTACTHREAGEPLGDEIFGKAANENSAVMSGDLSFAIQLAKRFAKE 62
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRA 106
V ++ FD S + L W+++ F + GH D +GS + LG RRA
Sbjct: 63 VPSTITFDFDSAQLDATARAALDRQAHWIKQFPEVRFRVYGHTDSVGSDAYNKRLGRRRA 122
Query: 107 YAVFNYFVARGISASRMKV-TSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
A NY V +GIS R++ S+G+ P + +NRR + + G
Sbjct: 123 QAAVNYLVRQGISRHRLEALVSFGETRPVIV--TAHRERRNRRTVTEVSG 170
>gi|93006335|ref|YP_580772.1| OmpA/MotB [Psychrobacter cryohalolentis K5]
gi|92394013|gb|ABE75288.1| OmpA/MotB [Psychrobacter cryohalolentis K5]
Length = 172
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 47/164 (28%), Positives = 82/164 (50%), Gaps = 14/164 (8%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKIS-------SPDTVLNESSLQEQF------SSSV 48
+ + + ++ SA+ + S +++ N + + + + ++
Sbjct: 7 KIAALAVLSSAVVLASGCATKRATSEVVVAPLGIPGGQVGYNGAVIVDNSNAVITGAENI 66
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAY 107
V+F S +I VL+ L+ + +I GH DE GSR +IALG RRA
Sbjct: 67 QAVVYFAFDSSAITSQSAGVLNQHAGLLKSNPNAGVVIAGHTDERGSREYNIALGERRAQ 126
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
A +Y A+G++A+ ++V SYG+E P+ G +EDAYA+NRRA +
Sbjct: 127 AARDYLAAQGVAANNIRVISYGEERPAAAGTNEDAYAQNRRAEL 170
>gi|310778685|ref|YP_003967018.1| OmpA/MotB domain protein [Ilyobacter polytropus DSM 2926]
gi|309748008|gb|ADO82670.1| OmpA/MotB domain protein [Ilyobacter polytropus DSM 2926]
Length = 342
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLR 104
+ F +SY + A + + + LE H IEG+ D G+ ++ L +
Sbjct: 229 EEGLKLRELFSVNSYEVTGAGLAEIDEISQVLEGHKGTLTIEGNTDSTGAAKYNMMLSEK 288
Query: 105 RAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
RA AV N F AR + +G+E P V +A A+NRR VF
Sbjct: 289 RAEAVANVFKARLEGEEIEIVSKGFGEENPLVPNTTPEAKAQNRRVEVF 337
>gi|117625045|ref|YP_854033.1| putative outer membrane protein [Escherichia coli APEC O1]
gi|115514169|gb|ABJ02244.1| putative outer membrane protein [Escherichia coli APEC O1]
Length = 537
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 2/126 (1%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGH 88
P+ + ++ + + + FD ++ +VL + L + K L+ G+
Sbjct: 401 PPEQKMEVTASLQVQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGY 460
Query: 89 ADELGSRNSSIALGLRRAYAVFNY-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
D G S+ L LRRA AV N+ I A+ V G+ P+ A NR
Sbjct: 461 TDATGDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNR 520
Query: 148 RAIVFL 153
R + L
Sbjct: 521 RVEISL 526
>gi|114765948|ref|ZP_01444962.1| hypothetical protein 1100011001347_R2601_22192 [Pelagibaca
bermudensis HTCC2601]
gi|114541762|gb|EAU44800.1| hypothetical protein R2601_22192 [Roseovarius sp. HTCC2601]
Length = 360
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 1/116 (0%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSR 95
E+ + S +++F S + + +L NL + D I GH D GS
Sbjct: 241 EACIGRFEILSRAGNIYFGAGSARLSAESVPLLENLYDVVSRCPDLKIEIAGHTDSDGSD 300
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+++ L RA +V Y +GI SRM V YG+ P + A+NRR
Sbjct: 301 AANLRLSELRAASVKEYLQGKGIPESRMLVVGYGEAQPLLENTSAANKARNRRIEF 356
>gi|320158759|ref|YP_004191137.1| outer membrane protein ImpK/VasF, OmpA/MotB domain [Vibrio
vulnificus MO6-24/O]
gi|319934071|gb|ADV88934.1| outer membrane protein ImpK/VasF OmpA/MotB domain [Vibrio
vulnificus MO6-24/O]
Length = 442
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 55/143 (38%), Gaps = 4/143 (2%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL 72
I+ ++++ +L +L ++ + + F++ S + V+S +
Sbjct: 283 ISSLAVANQIQRSLATEIEMGLLKVDALPDRVRITFQSNDLFESGSAELVAHIFPVVSKV 342
Query: 73 GSWLEKHDCDFLIEGHADELGSR----NSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
LE + L+ GH D S+ L L RA A+ + + G + R+
Sbjct: 343 ARALEATNGKILVVGHTDNNPIFTSKFPSNWHLSLARATALTDRLASAGKLSGRVIPEGM 402
Query: 129 GKEMPSVYGHDEDAYAKNRRAIV 151
G+ P V + + NRR +
Sbjct: 403 GEARPLVSNETAEGRSINRRVEI 425
>gi|268316337|ref|YP_003290056.1| OmpA/MotB domain-containing protein [Rhodothermus marinus DSM 4252]
gi|262333871|gb|ACY47668.1| OmpA/MotB domain protein [Rhodothermus marinus DSM 4252]
Length = 253
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 45/126 (35%), Gaps = 6/126 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ + + + + DS+ F + I +L L ++ ++EGH D
Sbjct: 103 EGKVQVNLTDKGLHLIITDSIMFRSGEAEIIEPSRTILRILAGIIDDRIESVVVEGHTDN 162
Query: 92 LGSR----NSSIALGLRRAYAVFNYFVARGI--SASRMKVTSYGKEMPSVYGHDEDAYAK 145
S+ L RA AV + + + SR YG+ P + A+
Sbjct: 163 RPIHTARFPSNWELSAARAAAVVRFLLEQTDALPPSRYMAVGYGEFHPRDTNATPEGRAR 222
Query: 146 NRRAIV 151
NRR +
Sbjct: 223 NRRVEI 228
>gi|167817630|ref|ZP_02449310.1| ompA family protein [Burkholderia pseudomallei 91]
Length = 240
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++ F+T S ++ P +L + + + I GH D G+R S+IAL RA
Sbjct: 133 NRTIEFETGSATLTPQGRAILDQMAGALAKMSNRTVEIIGHTDNSGNRTSNIALSQARAD 192
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
AV Y V +GI++ ++ T G + P D A+NRR
Sbjct: 193 AVKGYLVTKGIASQQLTTTGVGPDQPIAPNDSADGRARNRRIEF 236
>gi|187927781|ref|YP_001898268.1| peptidoglycan-associated lipoprotein [Ralstonia pickettii 12J]
gi|187724671|gb|ACD25836.1| peptidoglycan-associated lipoprotein [Ralstonia pickettii 12J]
Length = 173
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 44/129 (34%), Positives = 69/129 (53%), Gaps = 2/129 (1%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDF 83
D + +P V + + S S++FD SYS++ +L +L+ H
Sbjct: 45 DARTVTPVDVGRDELT-DPNSPLAKRSIYFDFDSYSVKSEYQGLLGQHSRYLQSHNQRKV 103
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
LI+G+ DE G+ ++ALG +RA AV + G+ S+M+ S GKE P GHDED++
Sbjct: 104 LIQGNTDERGTSEYNLALGQKRAEAVRRALSSMGVPDSQMEAVSLGKEKPQATGHDEDSW 163
Query: 144 AKNRRAIVF 152
A+NRRA +
Sbjct: 164 AQNRRADIV 172
>gi|73920657|gb|AAZ94164.1| OpcL [Burkholderia sp. BC92]
Length = 139
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 43/136 (31%), Positives = 72/136 (52%), Gaps = 2/136 (1%)
Query: 17 SISGIDNLDTKISSPDTV-LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
+ + + T+ S+ + +N L + S S++FD SYS++ ++ +
Sbjct: 4 NANNAGAVSTQPSADNVAQVNVDPLNDPNSPLAKRSIYFDFDSYSVKDEYQPLMQQHAQY 63
Query: 76 LEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
L+ H LI+G+ DE G+ ++ALG +RA AV G++ S+M+ S GKE P
Sbjct: 64 LKSHPQRHVLIQGNTDERGTSEYNLALGQKRAEAVRRAMALLGVNDSQMEAVSLGKEKPQ 123
Query: 135 VYGHDEDAYAKNRRAI 150
GHDE ++A+NRRA
Sbjct: 124 ATGHDEASWAQNRRAD 139
>gi|329944220|ref|ZP_08292479.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386]
gi|328530950|gb|EGF57806.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386]
Length = 462
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 31/157 (19%), Positives = 57/157 (36%), Gaps = 10/157 (6%)
Query: 11 SAITMMSISGIDNLDTKI-------SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRP 63
SA +++ + + D + D + + + +V V F S +
Sbjct: 130 SAADVLAKAELTTSDPGPCRLQSHTVAADGSSDVKRDEASTTVTVAGDVTFAVDSDQLSA 189
Query: 64 ADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS 121
VL+ + ++K+ + I GH D++ + L RRA AV ++
Sbjct: 190 QADSVLAGVVEQIKKYPSGGELTITGHTDDVADDAHNQDLSERRAKAVSGRLKTLTDLSA 249
Query: 122 RMKVT-SYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
+ G+ P V E+ NRR V LK +
Sbjct: 250 WKEAVSGKGESSPRVPNDSEENKQANRRVEVTLKPSK 286
>gi|193065118|ref|ZP_03046192.1| OmpA domain protein [Escherichia coli E22]
gi|194426303|ref|ZP_03058858.1| OmpA domain protein [Escherichia coli B171]
gi|260845464|ref|YP_003223242.1| putative outer membrane lipoprotein [Escherichia coli O103:H2 str.
12009]
gi|192927249|gb|EDV81869.1| OmpA domain protein [Escherichia coli E22]
gi|194415611|gb|EDX31878.1| OmpA domain protein [Escherichia coli B171]
gi|257760611|dbj|BAI32108.1| predicted outer membrane lipoprotein [Escherichia coli O103:H2 str.
12009]
Length = 550
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 2/126 (1%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGH 88
P+ + ++ + + + FD ++ +VL + L + K L+ G+
Sbjct: 414 PPEQKMEVTASLQAQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGY 473
Query: 89 ADELGSRNSSIALGLRRAYAVFNY-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
D G S+ L LRRA AV N+ I A+ V G+ P+ A NR
Sbjct: 474 TDATGDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNR 533
Query: 148 RAIVFL 153
R + L
Sbjct: 534 RVEISL 539
>gi|323159967|gb|EFZ45936.1| ompA family protein [Escherichia coli E128010]
Length = 250
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 2/126 (1%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGH 88
P+ + ++ + + + FD ++ +VL + L + K L+ G+
Sbjct: 114 PPEQKMEVTASLQAQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGY 173
Query: 89 ADELGSRNSSIALGLRRAYAVFNY-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
D G S+ L LRRA AV N+ I A+ V G+ P+ A NR
Sbjct: 174 TDATGDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNR 233
Query: 148 RAIVFL 153
R + L
Sbjct: 234 RVEISL 239
>gi|325105244|ref|YP_004274898.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
gi|324974092|gb|ADY53076.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
Length = 285
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 6/114 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD----ELGSRNSSIA 100
S+ D++ + + SY I Q LS + ++ + LIEG+ D + ++
Sbjct: 154 ISLADNMLYKSGSYEISDRADQTLSKIAKIIKDYKNYGVLIEGNTDNVPISQTNIRNNWD 213
Query: 101 LGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L + RA +V + + R+ G+ P E+ +KNRR + +
Sbjct: 214 LSVLRASSVVQSLQTKYGVDPKRLTAGGRGEYNPVAPNSTEEGKSKNRRTQIII 267
>gi|256003832|ref|ZP_05428819.1| OmpA/MotB domain protein [Clostridium thermocellum DSM 2360]
gi|255992170|gb|EEU02265.1| OmpA/MotB domain protein [Clostridium thermocellum DSM 2360]
gi|316939122|gb|ADU73156.1| OmpA/MotB domain protein [Clostridium thermocellum DSM 1313]
Length = 266
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 51/133 (38%), Gaps = 5/133 (3%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI 85
+ D + + + + + FD I+ + L +G+ +++ + + +I
Sbjct: 131 VEEMDLDEYVKVIEDDKSLTVRMNSVILFDLGKADIKEPGKETLRKIGTLIKQLNKNAVI 190
Query: 86 EGHADELGSRNS----SIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDE 140
+GH D L + L +RA V + V + ++ T G+ P E
Sbjct: 191 QGHTDNLPINTMLFPTNWELSTKRATNVVLFLVDECGVDPVKLTATGNGEFRPIAPNDTE 250
Query: 141 DAYAKNRRAIVFL 153
+ KNRR + +
Sbjct: 251 ENRQKNRRIDIVI 263
>gi|311746197|ref|ZP_07719982.1| putative outer membrane protein, OmpA family [Algoriphagus sp. PR1]
gi|126576424|gb|EAZ80702.1| putative outer membrane protein, OmpA family [Algoriphagus sp. PR1]
Length = 640
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGL 103
V +++FFD Y ++P + L L +L+++ + + LI GH D +GS + + L L
Sbjct: 530 EEFVFENIFFDFDKYDLKPESLSSLKRLLKFLKENSNVNILISGHTDNVGSPSYNQELSL 589
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+RA +V Y V +G+ R+ V G + P V + A NRR V +
Sbjct: 590 KRAQSVQQYLVEQGMHPGRVMVEGKGDKEPMVPNTNSQNQALNRRITVKV 639
>gi|118581870|ref|YP_903120.1| OmpA/MotB domain-containing protein [Pelobacter propionicus DSM
2379]
gi|118504580|gb|ABL01063.1| OmpA/MotB domain protein [Pelobacter propionicus DSM 2379]
Length = 271
Score = 73.7 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 55/138 (39%), Gaps = 8/138 (5%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGH 88
+ +N + + S+ ++ FFD+ I+P ++++ + + ++ +EGH
Sbjct: 122 QGAQSKVNLTITRRGLIVSLKEAGFFDSGQAQIKPTAYELINTIAEVMTQYSNPLRLEGH 181
Query: 89 ADELGS----RNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAY 143
D + S+ L RA Y + + ++ V Y + P +
Sbjct: 182 TDNVPINTSQFPSNWELSTARAVNGLKYLIRNFGVDPDKISVAGYAEFRPMADNATPEGR 241
Query: 144 AKNRRAIVFL---KGCRA 158
AKNRR + + +G R
Sbjct: 242 AKNRRVDLVMLSNEGERG 259
>gi|167920717|ref|ZP_02507808.1| ompA family protein [Burkholderia pseudomallei BCC215]
Length = 247
Score = 73.7 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++ F+T S ++ P +L + + + I GH D G+R S+IAL RA
Sbjct: 140 NRTIEFETGSATLTPQGRAILDQMAGALAKMSNRTVEIIGHTDNSGNRTSNIALSQARAD 199
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
AV Y V +GI++ ++ T G + P D A+NRR
Sbjct: 200 AVKGYLVTKGIASQQLTTTGVGPDQPIAPNDSADGRARNRRIEF 243
>gi|331006559|ref|ZP_08329851.1| Flagellar motor rotation protein MotB [gamma proteobacterium
IMCC1989]
gi|330419628|gb|EGG94002.1| Flagellar motor rotation protein MotB [gamma proteobacterium
IMCC1989]
Length = 325
Score = 73.7 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 18/117 (15%), Positives = 45/117 (38%), Gaps = 4/117 (3%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNS 97
+ + + F + S+ + V+ ++ + ++GH D + S
Sbjct: 167 RKIIVRIREKGSFQSGSHIMNDDYYDVMDDIREAVLTKPGKIQVQGHTDNIPIRSARYRS 226
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ L RA +V + + R +V+ + V + E+ ++NRR + ++
Sbjct: 227 NWELSTARAVSVAQALMDGDVDPRRFEVSGFADTQSLVDNNSEENRSRNRRVEIVIR 283
>gi|225849664|ref|YP_002729898.1| OmpA/MotB [Persephonella marina EX-H1]
gi|225646381|gb|ACO04567.1| OmpA/MotB [Persephonella marina EX-H1]
Length = 286
Score = 73.7 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 1/133 (0%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDC 81
K + + E + + + + F+ Y I+ + L+ + +L+ K +
Sbjct: 150 KTPEKKVEKEREIIEEQFEGYYPLKLHARIHFEFDKYQIKKEYLPYLNVISKYLKSKPNL 209
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
I G+ D +GS++ + L +RA AV Y + +GI A R+++ GKE V
Sbjct: 210 KVKIVGYTDSIGSKSYNDRLAYKRALAVKEYLIKQGIPAERIEIVGRGKENYLVDNKTWL 269
Query: 142 AYAKNRRAIVFLK 154
NRRA F+
Sbjct: 270 NRFTNRRADFFVM 282
>gi|330807883|ref|YP_004352345.1| hypothetical protein PSEBR_a1163 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327375991|gb|AEA67341.1| Conserved hypothetical protein; putative outer membrane protein
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 231
Score = 73.7 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 54/133 (40%), Gaps = 3/133 (2%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD- 82
D + E + + V V F+ + ++ PAD VLS + + L++
Sbjct: 97 ADGCPPPAPPPMAEEPPVVKEETIVIRDVHFEFNKATLTPADKDVLSGVATRLKQETSTT 156
Query: 83 -FLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDE 140
+ GH D +GS + L +RA +V Y V AS + V+ G+ P
Sbjct: 157 QLRVTGHTDSVGSDAYNQRLSEKRANSVVQYLVDNGVPRASFVSVSGAGESQPVADNKTA 216
Query: 141 DAYAKNRRAIVFL 153
D A NRR + +
Sbjct: 217 DGRAMNRRTEIKI 229
>gi|260768688|ref|ZP_05877622.1| outer membrane protein [Vibrio furnissii CIP 102972]
gi|260616718|gb|EEX41903.1| outer membrane protein [Vibrio furnissii CIP 102972]
Length = 229
Score = 73.7 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
V E + Q + + + F T+SY + + L + +E D +I+GH D
Sbjct: 103 SGVQVERVGENQLVLRMQNGIGFQTNSYQLDSSIHNTLRGVAKILVEYPDTSLVIDGHTD 162
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS ++ L RRA +V ++ +++G++A R G+ P D + NRR
Sbjct: 163 STGSDTTNQILSERRAESVRSFLLSQGVAAGRAIARGNGERYPLCTNSTADGRSCNRRVE 222
Query: 151 VFL 153
+ +
Sbjct: 223 IQI 225
>gi|167564292|ref|ZP_02357208.1| ompA family protein [Burkholderia oklahomensis EO147]
Length = 243
Score = 73.7 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAY 107
++ F+T S ++ P +L + L K I GH D G+R S+IAL RA
Sbjct: 136 NRTIEFETGSATLTPQGRAILDQMAGALAKMSSRTVEIIGHTDNSGNRASNIALSQARAD 195
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
AV Y VA+GI++ ++ T G + P D A+NRR
Sbjct: 196 AVKGYLVAKGIASQQLTTTGVGPDQPIASNDTNDGRARNRRIEF 239
>gi|24373103|ref|NP_717146.1| flagellar motor protein MotB [Shewanella oneidensis MR-1]
gi|24347292|gb|AAN54590.1|AE015599_2 sodium-driven polar flagellar protein PomB [Shewanella oneidensis
MR-1]
Length = 308
Score = 73.7 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 5/133 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
D + SL +Q + + F + S ++P V+ ++G L+ + G+ D
Sbjct: 164 ADGAIEIESLGQQIIIRIREKGSFASGSGFLQPRFKPVVRSVGELLKDVPGIITVSGYTD 223
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
++ +S+ L +RA AV + + +G RMKV P V D A+
Sbjct: 224 DMQISDELYSSNWDLSSKRAVAVADVLLQVKGFDPKRMKVVGMASNNPIVPNDSPDNRAR 283
Query: 146 NRRAIVFLKGCRA 158
NRR + ++ +A
Sbjct: 284 NRRVEIAIEQGKA 296
>gi|107024166|ref|YP_622493.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
gi|105894355|gb|ABF77520.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
Length = 247
Score = 73.7 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++ F+T S ++ P +L + + + + I GH D G+R S+IAL RA
Sbjct: 140 NRTIEFETGSATLTPQGKLILDQMAAALAKMQNRTVDIIGHTDNSGNRTSNIALSQARAD 199
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV Y + + I +M T G + P D A+NRR +
Sbjct: 200 AVKGYLITKSIPPQQMTTTGVGPDQPIAPNDMADGRARNRRIEFRV 245
>gi|317064019|ref|ZP_07928504.1| autotransporter protease [Fusobacterium ulcerans ATCC 49185]
gi|313689695|gb|EFS26530.1| autotransporter protease [Fusobacterium ulcerans ATCC 49185]
Length = 805
Score = 73.7 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 44/122 (36%), Gaps = 2/122 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHAD 90
+ ++ F S+ +V+ + ++K+ IEGH D
Sbjct: 680 ASSPKPVENPVIKYTMTGKNHFSFDESSLTEDGKKVIRKISEEIDKNSKRGILTIEGHTD 739
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
+G+ + L +RA +V F + + + YGK P + AKNRR
Sbjct: 740 SIGTTEYNQKLSEKRAESVEKEFKENLKTEIKYETKGYGKSRPVADNKIAEGRAKNRRVD 799
Query: 151 VF 152
+
Sbjct: 800 IK 801
>gi|222034509|emb|CAP77251.1| hypothetical protein LF82_430 [Escherichia coli LF82]
gi|312947346|gb|ADR28173.1| hypothetical protein NRG857_13805 [Escherichia coli O83:H1 str. NRG
857C]
Length = 550
Score = 73.7 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 2/126 (1%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGH 88
P+ + ++ + + + FD ++ +VL + L + K L+ G+
Sbjct: 414 PPEQKMEVTASLQVQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGY 473
Query: 89 ADELGSRNSSIALGLRRAYAVFNY-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
D G S+ L LRRA AV N+ I A+ V G+ P+ A NR
Sbjct: 474 TDATGDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNR 533
Query: 148 RAIVFL 153
R + L
Sbjct: 534 RVEISL 539
>gi|91212188|ref|YP_542174.1| hypothetical protein UTI89_C3194 [Escherichia coli UTI89]
gi|218559806|ref|YP_002392719.1| hypothetical protein ECS88_3087 [Escherichia coli S88]
gi|91073762|gb|ABE08643.1| hypothetical protein UTI89_C3194 [Escherichia coli UTI89]
gi|218366575|emb|CAR04328.1| conserved hypothetical protein; putative membrane protein
[Escherichia coli S88]
gi|294493880|gb|ADE92636.1| OmpA domain protein [Escherichia coli IHE3034]
gi|307625612|gb|ADN69916.1| hypothetical protein UM146_02475 [Escherichia coli UM146]
gi|315289326|gb|EFU48721.1| OmpA family protein [Escherichia coli MS 110-3]
gi|323951748|gb|EGB47623.1| OmpA family protein [Escherichia coli H252]
gi|323957271|gb|EGB52994.1| OmpA family protein [Escherichia coli H263]
Length = 550
Score = 73.7 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 2/126 (1%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGH 88
P+ + ++ + + + FD ++ +VL + L + K L+ G+
Sbjct: 414 PPEQKMEVTASLQVQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGY 473
Query: 89 ADELGSRNSSIALGLRRAYAVFNY-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
D G S+ L LRRA AV N+ I A+ V G+ P+ A NR
Sbjct: 474 TDATGDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNR 533
Query: 148 RAIVFL 153
R + L
Sbjct: 534 RVEISL 539
>gi|307824145|ref|ZP_07654372.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
gi|307734929|gb|EFO05779.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
Length = 396
Score = 73.7 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 2/105 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
V FD +I+P + L N + + + ++GH G+ + L RRA AV
Sbjct: 290 DVKFDNDKSNIKPQYYRELDNAVTVINQNPGVNIEVQGHTSSTGTVEYNQRLSERRALAV 349
Query: 110 FNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
NY ++ A R + YG P E+ A NRR + +
Sbjct: 350 KNYLSSKSAHAGRTLTARGYGLTQPIDTNETEEGRANNRRVQLEV 394
>gi|283955082|ref|ZP_06372585.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni
414]
gi|283793449|gb|EFC32215.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni
414]
Length = 319
Score = 73.7 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 53/144 (36%), Gaps = 3/144 (2%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+ ++ + + ++ F +I P + + +
Sbjct: 176 AVEEVASTRLAPQAKCPVEPREGALLDENGCEKTISLEGHFGFDKTTINPTFQEKIKEIA 235
Query: 74 SW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
E D ++EGH D +GSR + L RRA +V N G+ +R+K YG++
Sbjct: 236 KVLDENERYDTILEGHTDNVGSRAYNQKLSERRAKSVANELEKYGVEKNRIKTIGYGQDN 295
Query: 133 PSVYGHDEDAYAKNRRAI--VFLK 154
P ++ A NRR L+
Sbjct: 296 PRSSNDTKEGRADNRRVDAKFILR 319
>gi|269119353|ref|YP_003307530.1| OmpA/MotB domain protein [Sebaldella termitidis ATCC 33386]
gi|268613231|gb|ACZ07599.1| OmpA/MotB domain protein [Sebaldella termitidis ATCC 33386]
Length = 178
Score = 73.7 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 44/111 (39%), Gaps = 7/111 (6%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
D ++FD ++P L ++ I G+ D GS + L LRRA AV
Sbjct: 66 DKLYFDFDDSRVKPEYYGELRAAAEVIKNSSMRVNITGYTDSKGSAEYNEKLSLRRAEAV 125
Query: 110 FNYFVARGISASRMK-VTSYGKEMPSVYG------HDEDAYAKNRRAIVFL 153
+ G++ + + V G+ P + + AKNRR + L
Sbjct: 126 KAKLMEFGLNENYIAGVRGLGESNPIAPNTKSDGKDNPEGRAKNRRIELEL 176
>gi|167826034|ref|ZP_02457505.1| ompA family protein [Burkholderia pseudomallei 9]
Length = 247
Score = 73.7 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAY 107
++ F+T S ++ P +L + L K I GH D G+R S+IAL RA
Sbjct: 140 NRTIEFETGSATLTPQGRAILDQMAGALAKMSSRTVEIIGHTDNSGNRTSNIALSQARAD 199
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
AV Y V +GI++ ++ T G + P D A+NRR
Sbjct: 200 AVKGYLVTKGIASQQLTTTGVGPDQPIAPNDSADGRARNRRIEF 243
>gi|89053467|ref|YP_508918.1| OmpA/MotB [Jannaschia sp. CCS1]
gi|88863016|gb|ABD53893.1| OmpA/MotB [Jannaschia sp. CCS1]
Length = 172
Score = 73.3 bits (178), Expect = 9e-12, Method: Composition-based stats.
Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 1/118 (0%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRN 96
+ F+ VGD V F ++ VL+ WL + LIEGHADE G+R
Sbjct: 50 PTSPVYFNEVVGDRVLFAVDQSTLSSGAQSVLAGQAQWLLSNPEFTALIEGHADEQGTRE 109
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
++ALG RRA AV Y V++G+ +R++ SYGKE P DE Y++NRRA+ +
Sbjct: 110 YNLALGARRAAAVREYLVSQGVPDARLRTISYGKERPLQICSDEACYSQNRRAVTVIS 167
>gi|88859188|ref|ZP_01133829.1| flagellar motor protein [Pseudoalteromonas tunicata D2]
gi|88819414|gb|EAR29228.1| flagellar motor protein [Pseudoalteromonas tunicata D2]
Length = 290
Score = 73.3 bits (178), Expect = 9e-12, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 54/133 (40%), Gaps = 5/133 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
D + SL +Q + ++ F + S ++P ++ + L+ + + GH D
Sbjct: 148 QDGAIELESLGQQIIIRIRENGSFPSGSAFLQPQFKPIIQKIADLLKDVPGEITVSGHTD 207
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ ++ L +R+ AV + G +RM V + P V D ++ +
Sbjct: 208 DYQVSNELYFNNWDLSAKRSVAVASEMQKVSGFDKNRMVVIGHADTRPLVPNEDSESRKR 267
Query: 146 NRRAIVFLKGCRA 158
NRR + + +A
Sbjct: 268 NRRVEISIMQGKA 280
>gi|225375333|ref|ZP_03752554.1| hypothetical protein ROSEINA2194_00958 [Roseburia inulinivorans DSM
16841]
gi|225212822|gb|EEG95176.1| hypothetical protein ROSEINA2194_00958 [Roseburia inulinivorans DSM
16841]
Length = 270
Score = 73.3 bits (178), Expect = 9e-12, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 7/120 (5%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRN--- 96
E ++ +V FD+ I+ ++ +G L+ + + IEGH D + +
Sbjct: 142 AEYVLLNLNGAVLFDSGKSEIKSEAYPLMDKIGKILQSYQQNMIEIEGHTDNIPFTHSSK 201
Query: 97 --SSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L + RA V +Y I S +K + G+ +P + A+NRR + +
Sbjct: 202 YENNDVLSMYRALYVADYMRNITTIDPSHIKSSGRGEYVPIADNSTPEGRARNRRVEIKI 261
>gi|221209714|ref|ZP_03582695.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1]
gi|221170402|gb|EEE02868.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1]
Length = 428
Score = 73.3 bits (178), Expect = 9e-12, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 51/128 (39%), Gaps = 5/128 (3%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHA 89
+ TV + + + GD++F S++ + +++ + + + K I G+
Sbjct: 300 AAGTVSVDEDARRSVVTFRGDAMFRP-GGASVQVSMNPLIAKIAAEIAKVPGKVTIVGYT 358
Query: 90 DELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
D + S+ AL RA V A G+ A+R++ G P A+
Sbjct: 359 DNVPIRSGQFASNQALSEERATQVMQMLQAAGVQANRLEAVGKGDANPVGDNRTAQGRAQ 418
Query: 146 NRRAIVFL 153
NRR + +
Sbjct: 419 NRRVEIDV 426
>gi|94969959|ref|YP_592007.1| OmpA/MotB family outer membrane protein [Candidatus Koribacter
versatilis Ellin345]
gi|94552009|gb|ABF41933.1| outer membrane protein, OmpA/MotB family [Candidatus Koribacter
versatilis Ellin345]
Length = 263
Score = 73.3 bits (178), Expect = 9e-12, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 46/120 (38%), Gaps = 5/120 (4%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSS 98
+ + S+ + FFD+ S +RP+ I + S L + C +EGH D + +
Sbjct: 133 TTSDGLVISLQEIGFFDSGSAKLRPSSISAFGRIASILREKQCTVRVEGHTDPMPIHTAQ 192
Query: 99 IALGLRRAYA-----VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
A + A V GI+ + Y + P + A+NRR + +
Sbjct: 193 YASNWELSTARATGIVKRLIQEYGINPGDLSAGGYAEFHPVGPNDTAEGRAQNRRVDLVI 252
>gi|90577944|ref|ZP_01233755.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14]
gi|90441030|gb|EAS66210.1| hypothetical outer membrane protein OmpA [Vibrio angustum S14]
Length = 352
Score = 73.3 bits (178), Expect = 9e-12, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 42/111 (37%), Gaps = 2/111 (1%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALG 102
+ ++ F S ++ D L + + + + ++ GH D GS + L
Sbjct: 226 QVEPISVTMPFAFDSNTLTAEDQARLEPIAQRLVNFPNSELVVIGHTDSRGSEAYNQKLS 285
Query: 103 LRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
RA V Y + ASR+K G+ P + A+NRR V
Sbjct: 286 EERAKTVAVYLMKHFNIDASRVKGEGRGELDPVASNDTAEGRAQNRRVDVT 336
>gi|89899949|ref|YP_522420.1| OmpA/MotB [Rhodoferax ferrireducens T118]
gi|89344686|gb|ABD68889.1| OmpA/MotB [Rhodoferax ferrireducens T118]
Length = 181
Score = 73.3 bits (178), Expect = 9e-12, Method: Composition-based stats.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 21/173 (12%)
Query: 1 MQ---YSTIFIILSAITMMSISGIDNLDTKI-----------------SSPDTVLNESSL 40
M+ + + + + T+ + S + S+ +V+ S L
Sbjct: 5 MKINLFKNLTLAVMLATLAACSTTKVAEAPPVPVAVKAPTAPVAPPAQSTVKSVIAISPL 64
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSI 99
+ S SVFF ++ IR +D+ ++ + +EG+ADE G R ++
Sbjct: 65 DDANSPLAKRSVFFGFDNFQIRSSDLPLIEAHAKYLAANKSAKVRLEGNADERGGREYNL 124
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
ALG +RA AV G+ S ++ S+G E P GH+EDA+AKNRR +
Sbjct: 125 ALGQKRAEAVRRSLRLLGVPDSSLEAVSFGMEKPVDAGHNEDAWAKNRRVDLK 177
>gi|26249224|ref|NP_755264.1| hypothetical protein c3389 [Escherichia coli CFT073]
gi|227888360|ref|ZP_04006165.1| OmpA family membrane protein [Escherichia coli 83972]
gi|301049415|ref|ZP_07196377.1| OmpA family protein [Escherichia coli MS 185-1]
gi|26109631|gb|AAN81834.1|AE016765_236 Hypothetical protein c3389 [Escherichia coli CFT073]
gi|227834629|gb|EEJ45095.1| OmpA family membrane protein [Escherichia coli 83972]
gi|300298792|gb|EFJ55177.1| OmpA family protein [Escherichia coli MS 185-1]
gi|307554790|gb|ADN47565.1| OmpA family protein [Escherichia coli ABU 83972]
Length = 550
Score = 73.3 bits (178), Expect = 9e-12, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 2/126 (1%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGH 88
P+ + ++ + + + FD ++ +VL + L + K L+ G+
Sbjct: 414 PPEQKMEVTASLQVQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGY 473
Query: 89 ADELGSRNSSIALGLRRAYAVFNY-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
D G S+ L LRRA AV N+ I A+ V G+ P+ A NR
Sbjct: 474 TDATGDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNR 533
Query: 148 RAIVFL 153
R + L
Sbjct: 534 RVEISL 539
>gi|260776526|ref|ZP_05885421.1| Flagellar motor rotation protein MotB [Vibrio coralliilyticus ATCC
BAA-450]
gi|260607749|gb|EEX34014.1| Flagellar motor rotation protein MotB [Vibrio coralliilyticus ATCC
BAA-450]
Length = 300
Score = 73.3 bits (178), Expect = 9e-12, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 44/128 (34%), Gaps = 5/128 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ +L +Q + + F S ++P ++ + ++ + GH D
Sbjct: 156 QGAIEVENLGQQIDIRIREKGAFPEGSAFLQPKFRPLVRQIAELVKDIPGIVRVSGHTDN 215
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S+ L +RA +V R S R++V P E ++N
Sbjct: 216 QRIDSELYRSNWDLSAQRAVSVAQEMEKVRDFSHQRLQVRGMADTQPLGPNDTEAQRSRN 275
Query: 147 RRAIVFLK 154
RR + +
Sbjct: 276 RRVEISIM 283
>gi|86147507|ref|ZP_01065818.1| outer membrane protein [Vibrio sp. MED222]
gi|218709202|ref|YP_002416823.1| putative outer membrane protein [Vibrio splendidus LGP32]
gi|85834675|gb|EAQ52822.1| outer membrane protein [Vibrio sp. MED222]
gi|218322221|emb|CAV18335.1| putative outer membrane protein [Vibrio splendidus LGP32]
Length = 222
Score = 73.3 bits (178), Expect = 9e-12, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
V E + Q + + + FD+ SY++ + + L + +E D +IEGH D
Sbjct: 96 SGVQVERVGENQLLLRLENGIGFDSGSYALESSIHKTLRGVARILVEYPDTSLVIEGHTD 155
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS +S+ L RRA +V + +++ ++A R G+ P + A NRR
Sbjct: 156 STGSESSNQVLSERRAESVRAFLISQDVAAGRAIARGNGERYPLCDNNTSQGRACNRRVE 215
Query: 151 VFL 153
+ +
Sbjct: 216 IQI 218
>gi|238798865|ref|ZP_04642332.1| hypothetical protein ymoll0001_31770 [Yersinia mollaretii ATCC
43969]
gi|238717266|gb|EEQ09115.1| hypothetical protein ymoll0001_31770 [Yersinia mollaretii ATCC
43969]
Length = 575
Score = 73.3 bits (178), Expect = 9e-12, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 41/103 (39%), Gaps = 2/103 (1%)
Query: 53 FFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FD ++P +VL N L K ++ GH D G S+ L L+RA +V N
Sbjct: 444 LFDVGQSMLKPGSTKVLINALVGIKAKPGWLIVVAGHTDITGDDKSNQTLSLKRAESVRN 503
Query: 112 YFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ G V YG+ P E A NRR + L
Sbjct: 504 WMRDTGDIPESCFAVQGYGQSRPLKSNDTEAGRALNRRVEISL 546
>gi|116695082|ref|YP_840658.1| OmpA/MotB-family outer membrane protein [Ralstonia eutropha H16]
gi|113529581|emb|CAJ95928.1| outer membrane protein, OmpA/MotB-family [Ralstonia eutropha H16]
Length = 435
Score = 73.3 bits (178), Expect = 9e-12, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 36/101 (35%), Gaps = 4/101 (3%)
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIA----LGLRRAYAVFNY 112
+ L+ + + K + GH+D +++ L RA V Y
Sbjct: 333 GRAEVNAKLTPTLNKVAGEINKLQGKVQVIGHSDNQPIKSARYPSNQVLSEERAAMVSEY 392
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++G++ R++ G P A A NRR V +
Sbjct: 393 LASQGVAKRRLEAIGKGDTEPLTDNKTPAARAANRRVEVVV 433
>gi|28897464|ref|NP_797069.1| flagellar motor protein MotB [Vibrio parahaemolyticus RIMD 2210633]
gi|153840267|ref|ZP_01992934.1| flagellar motor protein [Vibrio parahaemolyticus AQ3810]
gi|260876424|ref|ZP_05888779.1| flagellar motor protein MotB [Vibrio parahaemolyticus AN-5034]
gi|28805676|dbj|BAC58953.1| sodium-driven polar flagellar protein MotB [Vibrio parahaemolyticus
RIMD 2210633]
gi|149746069|gb|EDM57199.1| flagellar motor protein [Vibrio parahaemolyticus AQ3810]
gi|308092849|gb|EFO42544.1| flagellar motor protein MotB [Vibrio parahaemolyticus AN-5034]
gi|328472526|gb|EGF43389.1| flagellar motor protein MotB [Vibrio parahaemolyticus 10329]
Length = 315
Score = 73.3 bits (178), Expect = 9e-12, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 46/128 (35%), Gaps = 5/128 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ +L +Q + + F S ++P ++ + ++ I GH D
Sbjct: 174 QGAIEVENLGQQIVIRMREKGAFPEGSAFLQPKFRPLVRQIAELVKDVPGIVRISGHTDN 233
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S+ L +RA +V RG S R++V P V ++ A N
Sbjct: 234 QRLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRLRVRGMADTEPLVPNDSDENRALN 293
Query: 147 RRAIVFLK 154
RR + +
Sbjct: 294 RRVEISIM 301
>gi|326776942|ref|ZP_08236207.1| OmpA/MotB domain protein [Streptomyces cf. griseus XylebKG-1]
gi|326657275|gb|EGE42121.1| OmpA/MotB domain protein [Streptomyces cf. griseus XylebKG-1]
Length = 215
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 42/115 (36%), Gaps = 1/115 (0%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSI-RPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRN 96
++ V F S + A+ ++ + +++ + G D LGS
Sbjct: 93 EDSNADIKFALQAEVLFGKDSAKLGSAANARIAAIAAEIKKQNATKVRVFGFTDNLGSAA 152
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
L +RA AV + ++ YG++ P +E+ KNRR V
Sbjct: 153 HGDVLSKQRADAVHGVLSKELGATITYEIRGYGEQYPIASNSNEEGRKKNRRVEV 207
>gi|269103244|ref|ZP_06155941.1| Flagellar motor rotation protein MotB [Photobacterium damselae
subsp. damselae CIP 102761]
gi|268163142|gb|EEZ41638.1| Flagellar motor rotation protein MotB [Photobacterium damselae
subsp. damselae CIP 102761]
Length = 314
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 41/118 (34%), Gaps = 5/118 (4%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNS 97
+Q + + F S ++P ++ + S ++ I GH D+ S
Sbjct: 173 QQLVIRIKEQGAFPEGSAFLQPKFRPLVRQVASLVKDVPGTVRISGHTDDRPVESELYRS 232
Query: 98 SIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ + +RA +V G RM+V P + +NRR + +
Sbjct: 233 NWDISAQRAVSVAQEMAKVTGFDQHRMQVVGLADTAPIASNDTAEGRKRNRRVEISIM 290
>gi|258405280|ref|YP_003198022.1| OmpA/MotB domain-containing protein [Desulfohalobium retbaense DSM
5692]
gi|257797507|gb|ACV68444.1| OmpA/MotB domain protein [Desulfohalobium retbaense DSM 5692]
Length = 322
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 56/137 (40%), Gaps = 8/137 (5%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHD 80
+ + + + ++ L VG +FF SI+ L +
Sbjct: 176 ADKEVETRTVYVTNTDTPLPMADKDDVG-MIFFQFDKASIQDQYTDELDEYVALLRRNPQ 234
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG--- 137
+ LIEGH D +GS ++ L L+RA AV +YFV IS+ R++ YG P
Sbjct: 235 MELLIEGHTDIIGSEKYNLDLSLQRAMAVHDYFVRHNISSERLRTKGYGFNKPIAPNFTQ 294
Query: 138 ---HDEDAYAKNRRAIV 151
+ + A NRR +
Sbjct: 295 NRKDNPEGRANNRRVEL 311
>gi|170736605|ref|YP_001777865.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
MC0-3]
gi|169818793|gb|ACA93375.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3]
Length = 234
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 39/136 (28%), Gaps = 1/136 (0%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVL-SNLGSWLE 77
G + + Q + F T S ++ L + +
Sbjct: 96 CGKPQPVVQPAPAPAPQPAPQPVPQRQVLLQGDANFATDSAALTSQARNDLDRFIAANRG 155
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
I G D GS + L RA V NY + G+ A G P
Sbjct: 156 VEFARVAITGFTDSTGSAAHNRTLSEARARTVVNYLRSNGLQARSFSAEGLGAADPVASN 215
Query: 138 HDEDAYAKNRRAIVFL 153
D A+NRR + L
Sbjct: 216 ATADGRAQNRRVEIRL 231
>gi|167912756|ref|ZP_02499847.1| ompA family protein [Burkholderia pseudomallei 112]
Length = 248
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAY 107
++ F+T S ++ P +L + L K I GH D G+R S+IAL RA
Sbjct: 141 NRTIEFETGSATLTPQGRAILDQMAGALAKMSSRTVEIIGHTDNSGNRTSNIALSQARAD 200
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
AV Y V +GI++ ++ T G + P D A+NRR
Sbjct: 201 AVKGYLVTKGIASQQLTTTGVGPDQPIAPNDSADGRARNRRIEF 244
>gi|149191535|ref|ZP_01869782.1| protein F-related protein [Vibrio shilonii AK1]
gi|148834609|gb|EDL51599.1| protein F-related protein [Vibrio shilonii AK1]
Length = 208
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 1/113 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIA 100
+ + + F+T S + Q L L S+L D +I GH D G+ +
Sbjct: 92 DYVMIRLKQKIHFNTGSAHVASTSAQWLQQLASFLSGQQGIDVVIGGHTDNTGTVAINDK 151
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L +RA +V +++ + + YG+ +P + A NRR + L
Sbjct: 152 LSDKRAESVRQTLISQRVPRQIIYTRGYGENVPECTNQTQYGKACNRRVELTL 204
>gi|312889185|ref|ZP_07748742.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
gi|311298347|gb|EFQ75459.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
Length = 286
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 49/131 (37%), Gaps = 6/131 (4%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEG 87
+ +N L+ S+ D++ + + SY I L+ + + + D LIEG
Sbjct: 137 ADESKDVNVKVLKGVVYISLSDNMLYKSGSYEISEKAGATLAKIAKIITDYKGYDVLIEG 196
Query: 88 HAD----ELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDA 142
+ D + ++ L RA +V + R+ G+ P E
Sbjct: 197 NTDNLPISKPNIRNNWDLSALRASSVVQSLQNNYGVEPKRLTAGGRGEYNPVADNSTESG 256
Query: 143 YAKNRRAIVFL 153
A+NRR + +
Sbjct: 257 KAQNRRTQIII 267
>gi|300980597|ref|ZP_07175094.1| OmpA family protein [Escherichia coli MS 45-1]
gi|300409214|gb|EFJ92752.1| OmpA family protein [Escherichia coli MS 45-1]
gi|315293784|gb|EFU53136.1| OmpA family protein [Escherichia coli MS 153-1]
Length = 550
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 2/126 (1%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGH 88
P+ + ++ + + + FD ++ +VL + L + K L+ G+
Sbjct: 414 PPEQKMEVTASLQVQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGY 473
Query: 89 ADELGSRNSSIALGLRRAYAVFNY-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
D G S+ L LRRA AV N+ I A+ V G+ P+ A NR
Sbjct: 474 TDATGDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNR 533
Query: 148 RAIVFL 153
R + L
Sbjct: 534 RVEISL 539
>gi|295135723|ref|YP_003586399.1| OmpA/MotB family outer hypothetical protein [Zunongwangia profunda
SM-A87]
gi|294983738|gb|ADF54203.1| OmpA/MotB family outer membrane protein [Zunongwangia profunda
SM-A87]
Length = 536
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 6/109 (5%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYA 108
+ ++F+ + +VL + L+ D I HAD G+ ++ L RRA A
Sbjct: 419 NRIYFEFDKSKVTEEYQEVLDKVIDILKGSDATEIKIASHADARGTEEYNLKLSQRRADA 478
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGH-----DEDAYAKNRRAIVF 152
Y VA+GIS+ + YG+ P E YAKNRR+++
Sbjct: 479 TKEYLVAKGISSENITTKGYGESQPVNDCTEERGCTEAEYAKNRRSVIT 527
>gi|170750466|ref|YP_001756726.1| OmpA/MotB domain-containing protein [Methylobacterium radiotolerans
JCM 2831]
gi|170656988|gb|ACB26043.1| OmpA/MotB domain protein [Methylobacterium radiotolerans JCM 2831]
Length = 319
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 39/103 (37%), Gaps = 1/103 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAV 109
V F T I PA + + + L I G+ D G+ + AL RA AV
Sbjct: 215 QVNFATDRAEILPASAPQIDAVAALLRTDPGLRLAINGYTDGTGAAAHNQALSDGRAKAV 274
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
V GI+ R++ +G P A+NRR +
Sbjct: 275 VARLVGAGIAKDRLRAEGFGAASPVASNDSAAGRAQNRRVELV 317
>gi|304405743|ref|ZP_07387401.1| OmpA/MotB domain protein [Paenibacillus curdlanolyticus YK9]
gi|304344986|gb|EFM10822.1| OmpA/MotB domain protein [Paenibacillus curdlanolyticus YK9]
Length = 278
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 50/134 (37%), Gaps = 6/134 (4%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLI 85
K T L+ Q Q ++ D+ + + S +++P ++ + L+++ + ++
Sbjct: 130 KSMGLTTQLDTKLNQSQLLITISDNALYASGSSAVKPESRKLGQAIAKMLKQYPGYEIIV 189
Query: 86 EGHADELGSRNSSIA-----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
GH D NS R + + + + T YG+ P E
Sbjct: 190 AGHTDNQPISNSDFRDNWDLSSDRALNFMQILLASAQLDPKLISSTGYGEFRPLTSNATE 249
Query: 141 DAYAKNRRAIVFLK 154
+KNRR V L
Sbjct: 250 AGRSKNRRVEVSLM 263
>gi|254292013|ref|ZP_04962792.1| lipoprotein, putative [Vibrio cholerae AM-19226]
gi|150422090|gb|EDN14058.1| lipoprotein, putative [Vibrio cholerae AM-19226]
Length = 223
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 56/128 (43%), Gaps = 1/128 (0%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLI 85
K V + Q + + + F ++SY + + L + +E D +I
Sbjct: 92 KALMDSGVQVVRVGENQLMLRMENGIGFTSNSYQLDSYIHKTLRGVARILVEYPDTSLVI 151
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
EGH D GS +++ L +RA +V ++ +++G++ R G+ P + + A
Sbjct: 152 EGHTDSTGSDSTNQVLSEKRAESVRSFLLSQGVAEGRAIARGNGERFPLCSNNTAEGRAC 211
Query: 146 NRRAIVFL 153
NRR + +
Sbjct: 212 NRRVEIQI 219
>gi|152995178|ref|YP_001340013.1| flagellar motor protein MotB [Marinomonas sp. MWYL1]
gi|150836102|gb|ABR70078.1| OmpA/MotB domain protein [Marinomonas sp. MWYL1]
Length = 330
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 44/122 (36%), Gaps = 5/122 (4%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS--- 94
+ ++ + + D F++ S + I V+ + L +EGH D +
Sbjct: 171 ETQEQTITIRIKDQGSFESGSAELNYDFIPVIDLIRDVLVGIQGTISVEGHTDNVPIASS 230
Query: 95 -RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
S+ L RA +V + G R VT Y P V A NRR +
Sbjct: 231 RFRSNWQLSSARAISVAEELFSTGQLDQGRFAVTGYADTRPLVPNDTPAHRATNRRVEII 290
Query: 153 LK 154
+K
Sbjct: 291 IK 292
>gi|114769969|ref|ZP_01447579.1| OmpA domain protein [alpha proteobacterium HTCC2255]
gi|114549674|gb|EAU52556.1| OmpA domain protein [alpha proteobacterium HTCC2255]
Length = 210
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 50/117 (42%), Gaps = 1/117 (0%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRN 96
+ Q ++ +++ FD S +R + L L + + I GH D +G ++
Sbjct: 73 KNTGNQLIVTLPEAITFDIDSSEVRYSLEDTLIRLSKSLNKYPKTNVEIIGHTDNVGGQD 132
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RRA +V + +S SR+K G+ P + + A NRR + +
Sbjct: 133 YNQKLSTRRAESVSSILAQNDVSRSRIKAYGRGEIEPMMSNNSSKGRASNRRVEIMI 189
>gi|312130324|ref|YP_003997664.1| v-type h(+)-translocating pyrophosphatase [Leadbetterella
byssophila DSM 17132]
gi|311906870|gb|ADQ17311.1| V-type H(+)-translocating pyrophosphatase [Leadbetterella
byssophila DSM 17132]
Length = 878
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F S I + ++ + N+ + L+++ + G+ D G+ ++ L RA V
Sbjct: 775 FKRGSNDIDESSMEEVKNIAAILKEYPQVKIKVGGYTDNTGTPEGNLKLSEERATNVKKA 834
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+A GIS R+ +G+E P E+ KNRR + ++
Sbjct: 835 LIALGISEDRLSSEGFGQEHPVADNTTEEGRQKNRRIAISVR 876
>gi|313682225|ref|YP_004059963.1| ompa/motb domain protein [Sulfuricurvum kujiense DSM 16994]
gi|313155085|gb|ADR33763.1| OmpA/MotB domain protein [Sulfuricurvum kujiense DSM 16994]
Length = 283
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 5/123 (4%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK-HDCDFLIEGHADELG 93
L S + ++ ++V F T ++ + L + L++ + F IEGH D +
Sbjct: 142 LTVSIENGRLVINLPENVLFPTGRTTLNAGGSETLKEIADVLKELPERRFQIEGHTDTVP 201
Query: 94 SRNS----SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
N + L RA V + + G+ + + YG+ P + + A NRR
Sbjct: 202 IHNDRFASNWELSSGRALRVVHLMIDEGVQPANISAAGYGEFQPRADNNTTEGKALNRRI 261
Query: 150 IVF 152
+
Sbjct: 262 EIV 264
>gi|260575964|ref|ZP_05843959.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
gi|259021890|gb|EEW25191.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
Length = 650
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 41/123 (33%), Gaps = 1/123 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHA 89
L + ++ + F S I + + L L ++ D I GH
Sbjct: 480 AALPTPAECLADINTALAVQKITFAPGSAEIAASAGKTLDALAEVLIKCPDLRLEIGGHT 539
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GS + AL RA AV R + + YG++ P ++ NRR
Sbjct: 540 DAQGSTEGNRALSQARAEAVLLGLQGRRAPVAGLTAVGYGEDKPLADNGTDEGREANRRI 599
Query: 150 IVF 152
Sbjct: 600 EFT 602
>gi|255038851|ref|YP_003089472.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
18053]
gi|254951607|gb|ACT96307.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
Length = 673
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 49/116 (42%), Gaps = 2/116 (1%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNS 97
++ + +++F + S + PA + L + ++ + L+EGH D G
Sbjct: 556 PIKAGQQIRLSNTMFSQS-SAEVTPASLVELDRIAETMQTYPTMEILLEGHTDNQGEVQK 614
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L R V Y +++GI R++ ++G P E KNRR +
Sbjct: 615 NVKLSADRVEQVKKYLLSKGIDGRRIQTKAWGPARPIASNLTEQTRQKNRRVEFTI 670
>gi|72162680|ref|YP_290337.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Thermobifida fusca YX]
gi|71916412|gb|AAZ56314.1| similar to Outer membrane protein and related
peptidoglycan-associated (lipo)proteins [Thermobifida
fusca YX]
Length = 356
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 43/125 (34%), Gaps = 2/125 (1%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHAD 90
D + S + S + V FD + ++ A + L + I+GH D
Sbjct: 231 DGSSSRSETGDTTSIMLSSDVLFDLNESTLTDAADETLRAVAEEIDASSTTTVKIDGHTD 290
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
G+ + L L RA AV +V +G P E+ AKNRR
Sbjct: 291 NTGNDAINNPLSLDRAKAVEKRLKELITRDGITFEVAGHGSADPVADNGTEEGRAKNRRV 350
Query: 150 IVFLK 154
+
Sbjct: 351 TITFS 355
>gi|238792655|ref|ZP_04636287.1| hypothetical protein yinte0001_22390 [Yersinia intermedia ATCC
29909]
gi|238728011|gb|EEQ19533.1| hypothetical protein yinte0001_22390 [Yersinia intermedia ATCC
29909]
Length = 575
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 41/103 (39%), Gaps = 2/103 (1%)
Query: 53 FFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FD ++ +VL N L K ++ GH D G S+ AL L+RA +V N
Sbjct: 444 LFDVGQSMLKSGSTKVLINALVGIKAKPGWLIVVAGHTDITGDDKSNQALSLKRAESVRN 503
Query: 112 YFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ G V YG+ P E A NRR + L
Sbjct: 504 WMRDTGDIPESCFAVQGYGQSRPLKSNDTEAGRALNRRVEISL 546
>gi|320539138|ref|ZP_08038809.1| peptidoglycan-associated outer membrane lipoprotein [Serratia
symbiotica str. Tucson]
gi|320030776|gb|EFW12784.1| peptidoglycan-associated outer membrane lipoprotein [Serratia
symbiotica str. Tucson]
Length = 169
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 44/124 (35%), Positives = 67/124 (54%), Gaps = 1/124 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGH 88
S + E + + ++V+F Y + Q+L ++L + +EGH
Sbjct: 45 SSNLSSEEQARLQMQELQKENTVYFGLDKYDVSADFAQILDAHATFLRNNASYKVTVEGH 104
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
ADE G+ +IALG RRA +V Y +G+ A ++ + SYGKE P+V GHD AYAKNRR
Sbjct: 105 ADERGTPEYNIALGERRANSVKMYLQGKGVLADQISIVSYGKEKPAVLGHDAAAYAKNRR 164
Query: 149 AIVF 152
A++
Sbjct: 165 AVLV 168
>gi|285017363|ref|YP_003375074.1| ompa family outer membrane protein precursor [Xanthomonas
albilineans GPE PC73]
gi|283472581|emb|CBA15086.1| putative ompa family outer membrane protein precursor [Xanthomonas
albilineans]
Length = 366
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 15/143 (10%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHD 80
D+ + PD S+ V FD + ++RP I +L+ +G D
Sbjct: 231 DSKPGQTVGPDGCPVPVSID-------LKGVNFDFNKSTLRPDAIGLLNEAVGILNSYPD 283
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYG-- 137
+ GH D +GS + L RRA V++Y V G+ ASR+ YGK P
Sbjct: 284 LKVQVAGHTDSIGSDKYNQKLSERRARVVYDYLVKHGVDASRLDGPIGYGKTRPIAPNTN 343
Query: 138 ----HDEDAYAKNRRAIVFLKGC 156
+ + AKNRR + ++
Sbjct: 344 PDGSDNPEGRAKNRRTELNVENK 366
>gi|283786225|ref|YP_003366090.1| outer membrane lipoprotein [Citrobacter rodentium ICC168]
gi|282949679|emb|CBG89298.1| outer membrane lipoprotein [Citrobacter rodentium ICC168]
Length = 160
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/155 (18%), Positives = 58/155 (37%), Gaps = 2/155 (1%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSI 61
++ + FI + + + + + + +S + D++ FD + Y++
Sbjct: 4 RFLSPFIFTALLLTGCQAPQGKFSPEQVAAMQTYGFTESAGDWSLGMSDTILFDKNDYTL 63
Query: 62 RPADIQVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA 120
R Q + + + L ++GH D G + + AL L+RA V + +
Sbjct: 64 RAQSRQQIQAMAARLASVGLKHARMDGHTDNYGEESYNEALSLKRANVVADAWAEGAQIP 123
Query: 121 S-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ GK+ P A+NRR V +
Sbjct: 124 RSNLTTQGLGKKYPIASNKTAKGRAENRRVAVVIS 158
>gi|159163741|pdb|2AIZ|P Chain P, Solution Structure Of Peptidoglycan Associated Lipoprotein
From Haemophilus Influenza Bound To
Udp-N-Acetylmuramoyl-L-
Alanyl-D-Glutamyl-Meso-2,6-Diaminopimeloyl-D-Alanyl-D-
Alanine
Length = 134
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/132 (31%), Positives = 63/132 (47%), Gaps = 1/132 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKH 79
+ + + ++V+F Y I +Q+L +
Sbjct: 1 CSSSNNDAAGNGAAQTFGGYSVADLQQRYNTVYFGFDKYDITGEYVQILDAHAAYLNATP 60
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
L+EG+ DE G+ +IALG RRA AV Y +G+ A ++ SYG+E P+V GHD
Sbjct: 61 AAKVLVEGNTDERGTPEYNIALGQRRADAVKGYLAGKGVDAGKLGTVSYGEEKPAVLGHD 120
Query: 140 EDAYAKNRRAIV 151
E AY+KNRRA++
Sbjct: 121 EAAYSKNRRAVL 132
>gi|134300281|ref|YP_001113777.1| OmpA/MotB domain-containing protein [Desulfotomaculum reducens
MI-1]
gi|134052981|gb|ABO50952.1| OmpA/MotB domain protein [Desulfotomaculum reducens MI-1]
Length = 261
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 49/128 (38%), Gaps = 5/128 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+ + + S D V F + P ++ +G+ L + +EGH D L
Sbjct: 112 VTVAIEERGVVVSFQDVVLFPLGVADLVPHSQGIVDKVGAILSQTPNYIRVEGHTDNLPI 171
Query: 95 RNS----SIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
+ + + L L R+ +V + + I R+ T YG+ P + +NRR
Sbjct: 172 QTNKFPSNWELSLARSASVVHRLINFSHIPPDRLSATGYGEYRPRRANDSDANRQQNRRV 231
Query: 150 IVFLKGCR 157
+ + +
Sbjct: 232 DIIVLRTK 239
>gi|88704268|ref|ZP_01101982.1| flagellar motor protein MotB [Congregibacter litoralis KT71]
gi|88701319|gb|EAQ98424.1| flagellar motor protein MotB [Congregibacter litoralis KT71]
Length = 272
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 50/121 (41%), Gaps = 4/121 (3%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS--- 94
+ + + + F + S S+ + I +L L L + +++GH D
Sbjct: 141 TGNDKWLEIKIPARMLFPSGSRSLLASSIPMLQRLAETLGGLPNEVVVQGHTDNQPIRNG 200
Query: 95 -RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA AV F GI SR+ +G P E++ A+NRR ++ +
Sbjct: 201 QFPSNWELSTARAAAVARVFEDEGIDPSRLSAVGFGPNRPITDNLTEESRAENRRVVILV 260
Query: 154 K 154
+
Sbjct: 261 R 261
>gi|84394243|ref|ZP_00992970.1| Outer membrane protein [Vibrio splendidus 12B01]
gi|84375118|gb|EAP92038.1| Outer membrane protein [Vibrio splendidus 12B01]
Length = 356
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 1/104 (0%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
F T+S + L L L+ H + GH D G+ ++ + +RA AV
Sbjct: 235 MFATNSTELSTDGKIALMPLVEVLKAHPQSSVAVVGHTDSTGAAEYNLMISKKRAAAVAA 294
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
Y +GI A R+ + G+E P + A+NRR + G
Sbjct: 295 YIEEQGIEADRITASGEGEENPIASNATAEGRAQNRRVDATIPG 338
>gi|319793927|ref|YP_004155567.1| type IV / vi secretion system protein, dotu family [Variovorax
paradoxus EPS]
gi|315596390|gb|ADU37456.1| type IV / VI secretion system protein, DotU family [Variovorax
paradoxus EPS]
Length = 458
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 41/113 (36%), Gaps = 4/113 (3%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIA---- 100
+ S F + + VL + + + + GH+D +
Sbjct: 328 AVSFRGDDMFVPGQARLNAKILPVLDKVADEINQVSGSVQVTGHSDNRPIKTREFPNNQV 387
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L +RA AV + +G+ ASR++ G MP A+NRR + +
Sbjct: 388 LSEKRADAVTAVLLGKGVVASRIRTEGRGDTMPVADSATAAGRARNRRVDIVV 440
>gi|325981887|ref|YP_004294289.1| OmpA/MotB domain-containing protein [Nitrosomonas sp. AL212]
gi|325531406|gb|ADZ26127.1| OmpA/MotB domain protein [Nitrosomonas sp. AL212]
Length = 264
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 51/134 (38%), Gaps = 4/134 (2%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ + + + + + SV F + I L + + ++ H+ + +E
Sbjct: 118 EPLVKNGQVRVTQNSLGITVEINASVLFSPGQAKLAENSILSLQAIANVIKGHEHEINVE 177
Query: 87 GHADE----LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
GH D + S+ L RA +V F+ +G+ A R+ YG+ P +
Sbjct: 178 GHTDNLPINTENFPSNWELSSARASSVIRLFIEKGVEAHRLTAIGYGENRPIESNETFEG 237
Query: 143 YAKNRRAIVFLKGC 156
+NRR V +
Sbjct: 238 RKRNRRVTVMIMST 251
>gi|312173865|emb|CBX82119.1| putative type VI secretion system-associated hypothetical protein
[Erwinia amylovora ATCC BAA-2158]
Length = 551
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 49/128 (38%), Gaps = 4/128 (3%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIE 86
+ P + E + + + FDT Y ++P ++L L K ++
Sbjct: 408 PAPPSLIPVEKDTPQ--AVRLDALSLFDTGKYQLKPNSTKMLVKALMGIKAKPGWLIVVA 465
Query: 87 GHADELGSRNSSIALGLRRAYAVFNY-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
GH D G N++ L +RA A+ ++ +S + V YG P +
Sbjct: 466 GHTDNTGEANANQVLSHKRAEALRHWMLSTSDVSPTCFAVQGYGATRPIASNDTVEGREA 525
Query: 146 NRRAIVFL 153
NRR + L
Sbjct: 526 NRRVEISL 533
>gi|292489687|ref|YP_003532577.1| putative type VI secretion system-associated protein [Erwinia
amylovora CFBP1430]
gi|292898097|ref|YP_003537466.1| outer membrane protein [Erwinia amylovora ATCC 49946]
gi|291197945|emb|CBJ45046.1| putative outer membrane protein [Erwinia amylovora ATCC 49946]
gi|291555124|emb|CBA23275.1| putative type VI secretion system-associated hypothetical protein
[Erwinia amylovora CFBP1430]
Length = 551
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 49/128 (38%), Gaps = 4/128 (3%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIE 86
+ P + E + + + FDT Y ++P ++L L K ++
Sbjct: 408 PAPPSLIPVEKDTPQ--AVRLDALSLFDTGKYQLKPNSTKMLVKALMGIKAKPGWLIVVA 465
Query: 87 GHADELGSRNSSIALGLRRAYAVFNY-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
GH D G N++ L +RA A+ ++ +S + V YG P +
Sbjct: 466 GHTDNTGEANANQVLSHKRAEALRHWMLSTSDVSPTCFAVQGYGATRPIASNDTVEGREA 525
Query: 146 NRRAIVFL 153
NRR + L
Sbjct: 526 NRRVEISL 533
>gi|115358234|ref|YP_775372.1| hypothetical protein Bamb_3484 [Burkholderia ambifaria AMMD]
gi|115283522|gb|ABI89038.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
Length = 432
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 46/127 (36%), Gaps = 4/127 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
++ + + F S++ + +++ + + + K I G+ D
Sbjct: 304 AAGTVSVDEDARHSAVTFRGDAMFKPGGASVQASMNPLIAKIATEIAKVPGKVTIIGYTD 363
Query: 91 ELGSRNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
++ R+ A L RA V A G+ A+R++ G P A+N
Sbjct: 364 KVPIRSRHFASNQVLSEERATQVMQMLQAAGVPANRLEAVGKGDAHPVGDNRTAQGRAQN 423
Query: 147 RRAIVFL 153
RR + +
Sbjct: 424 RRVEIDV 430
>gi|91204077|emb|CAJ71730.1| similar to flagellar motor protein B [Candidatus Kuenenia
stuttgartiensis]
Length = 215
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 49/141 (34%), Gaps = 9/141 (6%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
D + T S + DS+ FD +R L + L+
Sbjct: 70 SRRDLESKLAGTGAITKIKDGSVSIVLPDSILFDPGQTKLREQSKATLKKIAGILKTDIS 129
Query: 82 D--FLIEGHADELGS------RNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEM 132
+ IEGH D S+ L RA +V +Y V IS +R+ V +G+
Sbjct: 130 NEMVRIEGHTDSDPIQKQKDKYPSNWELSTARANSVLHYLVDECGISPTRVYVAGFGQFQ 189
Query: 133 PSVYGHDEDAYAKNRRAIVFL 153
P + A+NRR +
Sbjct: 190 PISDNKTKAGKAQNRRVEFVI 210
>gi|307718829|ref|YP_003874361.1| OmpA family protein [Spirochaeta thermophila DSM 6192]
gi|306532554|gb|ADN02088.1| OmpA family protein [Spirochaeta thermophila DSM 6192]
Length = 414
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 49/138 (35%), Gaps = 2/138 (1%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW- 75
S + +I S + + E ++ ++ F + P + + L L
Sbjct: 275 SAPSLAAPGERIPSLGEENSVEEVPEGIKITL-RTLHFLPDQAVLLPGEEEKLDLLAEAL 333
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
D L+ GH ++G +AL RA + V RG+ R+ G P
Sbjct: 334 NAIPDRTILVVGHTADVGKPRGQMALSEARAKTIVEELVKRGVKPERLIYLGKGGTEPVA 393
Query: 136 YGHDEDAYAKNRRAIVFL 153
E+ NRR +F+
Sbjct: 394 PNDTEEGRRLNRRVEIFV 411
>gi|171315482|ref|ZP_02904719.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
gi|171099482|gb|EDT44217.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
Length = 170
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 1/118 (0%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRN 96
+ F + FD Y+++P +++ +G L+ + + G++D+ G
Sbjct: 51 QETGQGFEFGASGPILFDFDRYNLKPDVRRIVERIGRTLKSAGINGVRVYGYSDDEGEAA 110
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ L RRA V V G+ R+ V GK P A+NRRA + +
Sbjct: 111 YDLELSRRRAEVVAIELVDAGLDGKRIAVVGKGKSDPVGDNRTPTGRAQNRRAAIVVS 168
>gi|42521782|ref|NP_967162.1| chemotaxis motB protein [Bdellovibrio bacteriovorus HD100]
gi|39574312|emb|CAE77816.1| chemotaxis motB protein [Bdellovibrio bacteriovorus HD100]
Length = 249
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 5/116 (4%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSS 98
++ S FF S ++P ++ L + L+ H +IEGH D+L S+
Sbjct: 125 GVRIALAASTFFQEGSAKLKPEALKSLDKVADVLKTHKKRIIIEGHTDDLPIAGTLFPSN 184
Query: 99 IALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA AV Y V + R SYG + P V ++ A NRR +F+
Sbjct: 185 WELAGGRASAVVRYLVKVHQMDPKRFVSLSYGDQKPVVPNDSDEHRAMNRRIEIFI 240
>gi|110833620|ref|YP_692479.1| peptidogycan-associated lipoprotein [Alcanivorax borkumensis SK2]
gi|110646731|emb|CAL16207.1| Peptidogycan-associated lipoprotein [Alcanivorax borkumensis SK2]
Length = 189
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/104 (33%), Positives = 63/104 (60%), Gaps = 1/104 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAY 107
++F S +I A + L ++L+ + + +EGHADE G+R ++AL RR+
Sbjct: 79 SRVIYFAFDSNTIPAAAFETLRAHATYLKNNANAKIRLEGHADERGTREYNVALSERRSK 138
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
AV + +G+++S++++ SYG+E P+ +GH E +AKNRR +
Sbjct: 139 AVEKFLRVQGVASSQLEIVSYGEEKPAAFGHSEMDWAKNRRVEI 182
>gi|300697371|ref|YP_003748032.1| outer membrane protein; OmpA/MotB domain [Ralstonia solanacearum
CFBP2957]
gi|299074095|emb|CBJ53637.1| putative outer membrane protein; OmpA/MotB domain [Ralstonia
solanacearum CFBP2957]
Length = 279
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 50/120 (41%), Gaps = 3/120 (2%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADE 91
++E SL +Q + + F+T S ++ P +L + + + I GH D
Sbjct: 158 AAVSEQSLLDQTLA--NRIIEFETGSATLTPKGRGILDEMAAVLPRLNGRKIEIVGHTDN 215
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
GSR ++ L RA V +Y + +G + G + P ++ ++NRR
Sbjct: 216 SGSRAMNLNLSQARAETVKSYLINKGAEPGTLTAIGVGPDQPVAANTTDEGRSRNRRIEF 275
>gi|90407045|ref|ZP_01215235.1| outer membrane protein [Psychromonas sp. CNPT3]
gi|90311916|gb|EAS40011.1| outer membrane protein [Psychromonas sp. CNPT3]
Length = 383
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 56/140 (40%), Gaps = 8/140 (5%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL 72
+++ + + + D V+ S + S +S I+ ++ + +
Sbjct: 251 ALIVATTALAVATPPMVITDKVITTKSTSQTLSG-------LYFNSSKIKT-SPELTNVV 302
Query: 73 GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
L+ + D + GH D LGS+ + L +RA V +Y V G+ SR+ V G+
Sbjct: 303 VQLLQTKEGDIEVIGHTDSLGSKKYNQWLSEKRAQVVADYLVKEGVDPSRIIVKGEGESS 362
Query: 133 PSVYGHDEDAYAKNRRAIVF 152
+ AKNRR +
Sbjct: 363 FVSSNETAEGRAKNRRVKIK 382
>gi|57238501|ref|YP_179632.1| fibronectin-binding protein [Campylobacter jejuni RM1221]
gi|57167305|gb|AAW36084.1| fibronectin-binding protein [Campylobacter jejuni RM1221]
gi|315058932|gb|ADT73261.1| Outer membrane fibronectin-binding protein [Campylobacter jejuni
subsp. jejuni S3]
Length = 319
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 53/144 (36%), Gaps = 3/144 (2%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+ ++ + + ++ F +I P + + +
Sbjct: 176 AVEEVADTRATPQVKCPVEPREGALLDENGCEKTISLEGHFGFDKTTINPTFQEKIKEIA 235
Query: 74 SW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
E D ++EGH D +GSR + L RRA +V N G+ SR+K YG++
Sbjct: 236 KVLDENERYDTILEGHTDNIGSRAYNQKLSERRAKSVANELEKYGVEKSRIKTVGYGQDN 295
Query: 133 PSVYGHDEDAYAKNRRAI--VFLK 154
P ++ A NRR L+
Sbjct: 296 PRSSNDTKEGRADNRRVDAKFILR 319
>gi|332970903|gb|EGK09879.1| outer membrane protein OprF [Psychrobacter sp. 1501(2011)]
Length = 315
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 58/142 (40%), Gaps = 7/142 (4%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
++ + P+ V+ + V F+ ++P Q + +++
Sbjct: 179 VANCPKILEPEIEPEPVVKVE-----IGKPINLEVLFEFDKAVVQPVLNQRSMAVANFMN 233
Query: 78 KHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSV 135
K+ +IEGH D +G+ N ++ L +RA AV +++ ++ +R+ +G+ P
Sbjct: 234 KYPNTSTIIEGHTDSIGAANYNMKLSQQRAEAVKQELISKYGVNPNRLITQGFGETRPVD 293
Query: 136 YGHDEDAYAKNRRAIVFLKGCR 157
E NRR + + +
Sbjct: 294 TNTTEKGRYNNRRVVATISAVQ 315
>gi|225848487|ref|YP_002728650.1| OmpA/MotB [Sulfurihydrogenibium azorense Az-Fu1]
gi|225643425|gb|ACN98475.1| putative OmpA/MotB [Sulfurihydrogenibium azorense Az-Fu1]
Length = 281
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 1/135 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ + K S T ++E+ + V F +S SI+ + L+ + +L+ H
Sbjct: 142 ATEPQEMKPSDVITKNEIKEVKEKQALEEPVRVHFYLNSVSIKKEYLPYLNVVARYLKTH 201
Query: 80 D-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
I G+ D +GS+ + L L+RA V Y V GI +R+ + GK+ V
Sbjct: 202 PDVKVKIVGYTDNIGSKAYNDKLALKRAETVKKYLVKMGIDPNRILIEGVGKDKYIVSNK 261
Query: 139 DEDAYAKNRRAIVFL 153
+E NRRA ++
Sbjct: 262 NEIDRFTNRRAEFYV 276
>gi|170697801|ref|ZP_02888887.1| type VI secretion system OmpA/MotB family protein [Burkholderia
ambifaria IOP40-10]
gi|170137303|gb|EDT05545.1| type VI secretion system OmpA/MotB family protein [Burkholderia
ambifaria IOP40-10]
Length = 433
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 45/127 (35%), Gaps = 4/127 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
++ + + F S++ + ++S + + + K I G+ D
Sbjct: 305 AAGTVSVDEDARHSAVTFRGDAMFKPGGASVQASMNPLVSKIAAEIAKVPGKVTIIGYTD 364
Query: 91 ELGSRNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ R+ A L RA V A G+ A+R++ G P A+N
Sbjct: 365 NVPIRSRHFASNQVLSEERATLVMQMLQAAGVPANRLEAVGKGDADPVGDNRTAQGRAQN 424
Query: 147 RRAIVFL 153
RR + +
Sbjct: 425 RRVEIDV 431
>gi|283956854|ref|ZP_06374327.1| outer membrane fibronectin-binding protein [Campylobacter jejuni
subsp. jejuni 1336]
gi|283791580|gb|EFC30376.1| outer membrane fibronectin-binding protein [Campylobacter jejuni
subsp. jejuni 1336]
Length = 319
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 53/144 (36%), Gaps = 3/144 (2%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+ ++ + + ++ F +I P + + +
Sbjct: 176 AVEEVADTRPAPQAKCPVEPREGALLDENGCEKTISLEGHFGFDKTTINPTFQEKIKEIA 235
Query: 74 SW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
E D ++EGH D +GSR + L RRA +V N G+ SR+K YG++
Sbjct: 236 KVLDENERYDTILEGHTDNIGSRAYNQKLSERRAKSVANELEKYGVEKSRIKTVGYGQDN 295
Query: 133 PSVYGHDEDAYAKNRRAI--VFLK 154
P ++ A NRR L+
Sbjct: 296 PRSSNDTKEGRADNRRVDAKFILR 319
>gi|148925647|ref|ZP_01809335.1| outer membrane fibronectin-binding protein [Campylobacter jejuni
subsp. jejuni CG8486]
gi|145845657|gb|EDK22748.1| outer membrane fibronectin-binding protein [Campylobacter jejuni
subsp. jejuni CG8486]
Length = 319
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 53/144 (36%), Gaps = 3/144 (2%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+ ++ + + ++ F +I P + + +
Sbjct: 176 AVEEVADTRPAPQAKCPVEPREGALLDENGCEKTISLEGHFGFDKTTINPTFQEKIKEIA 235
Query: 74 SW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
E D ++EGH D +GSR + L RRA +V N G+ SR+K YG++
Sbjct: 236 KVLDENERYDTILEGHTDNIGSRAYNQKLSERRAKSVANELEKYGVEKSRIKTVGYGQDN 295
Query: 133 PSVYGHDEDAYAKNRRAI--VFLK 154
P ++ A NRR L+
Sbjct: 296 PRSSNDTKEGRADNRRVDAKFILR 319
>gi|91787861|ref|YP_548813.1| OmpA/MotB [Polaromonas sp. JS666]
gi|91697086|gb|ABE43915.1| OmpA/MotB [Polaromonas sp. JS666]
Length = 180
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 44/177 (24%), Positives = 74/177 (41%), Gaps = 26/177 (14%)
Query: 1 MQYS----TIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSS---------- 46
M+ +IF L+ + G + + + D + + +S
Sbjct: 1 MKLKRVLFSIFSSLALAATLVACGSNVKLSDVPVEDRTASAKPSGDAGASSSRGVAPVQI 60
Query: 47 -----------SVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGS 94
+ ++FD SY I+P ++ + IEGH DE G
Sbjct: 61 GGTDVSGAGPANTARVIYFDFDSYVIKPEFQGIVEAHARYLTANKARKMAIEGHTDERGG 120
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
R ++ALG RR+ AV G++ ++++ S+GKE P+ G DED+ AKNRRA +
Sbjct: 121 REYNLALGQRRSEAVRRALGLLGVADAQVEAVSFGKEKPAATGSDEDSMAKNRRAEI 177
>gi|121612147|ref|YP_001001127.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni
81-176]
gi|167006020|ref|ZP_02271778.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni
81-176]
gi|87249779|gb|EAQ72738.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni
81-176]
Length = 319
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 53/144 (36%), Gaps = 3/144 (2%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+ ++ + + ++ F +I P + + +
Sbjct: 176 AVEEVADTRPAPQAKCPVEPREGALLDENGCEKTISLEGHFGFDKTTINPTFQEKIKEIA 235
Query: 74 SW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
E D ++EGH D +GSR + L RRA +V N G+ SR+K YG++
Sbjct: 236 KVLDENERYDTILEGHTDNIGSRAYNQKLSERRAKSVANELEKYGVEKSRIKTVGYGQDN 295
Query: 133 PSVYGHDEDAYAKNRRAI--VFLK 154
P ++ A NRR L+
Sbjct: 296 PRSSNDTKEGRADNRRVDAKFILR 319
>gi|315180390|gb|ADT87304.1| lipoprotein, hypothetical [Vibrio furnissii NCTC 11218]
Length = 222
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
V E + Q + + + F T+SY + + L + +E D +I+GH D
Sbjct: 96 SGVQVERVGENQLVLRMQNGIGFQTNSYQLDSSIHNTLRGVAKILVEYPDTSLVIDGHTD 155
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS ++ L RRA +V ++ +++G++A R G+ P D + NRR
Sbjct: 156 STGSDTTNQILSERRAESVRSFLLSQGVAAGRAIARGNGERYPLCTNSTADGRSCNRRVE 215
Query: 151 VFL 153
+ +
Sbjct: 216 IQI 218
>gi|322417875|ref|YP_004197098.1| peptidoglycan-associated lipoprotein [Geobacter sp. M18]
gi|320124262|gb|ADW11822.1| peptidoglycan-associated lipoprotein [Geobacter sp. M18]
Length = 198
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 1/137 (0%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVL-SNLGSWLE 77
+ + + + P S Q ++ + ++FD S + A + L N
Sbjct: 61 TTALSASSIKAEPVQPAAAGSQQGAAAADALEKIYFDFDSDLLSDAARKTLTDNFVKLKA 120
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+ +EG+ DE GS ++AL RRA A Y A G+ ASR+ YG+E P+ G
Sbjct: 121 MPNVKIRVEGNCDERGSDEYNLALSERRAQAAVKYLTALGVPASRLSAIGYGEEKPADSG 180
Query: 138 HDEDAYAKNRRAIVFLK 154
H +DA+A+NRR +
Sbjct: 181 HSDDAWARNRRDEFNIS 197
>gi|119897401|ref|YP_932614.1| flagellar motor protein MotD [Azoarcus sp. BH72]
gi|119669814|emb|CAL93727.1| flagellar motor protein MotB [Azoarcus sp. BH72]
Length = 279
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 49/132 (37%), Gaps = 4/132 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ D ++ S + + SV F ++ + L + L + IE
Sbjct: 116 APLTQDGQVSISEGAFGIAVEINASVLFAPGEATLGAPAVSALRAVAQVLAGAEFPITIE 175
Query: 87 GHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
GH D + S+ L RA +V F+ G+ A R+ Y + P +
Sbjct: 176 GHTDNIPISNLRFPSNWELSAVRASSVVRLFIESGVRAERLTAAGYADQRPVAGNDTDAG 235
Query: 143 YAKNRRAIVFLK 154
A+NRR + ++
Sbjct: 236 RARNRRVTIMIE 247
>gi|110642959|ref|YP_670689.1| OmpA family membrane protein [Escherichia coli 536]
gi|191171277|ref|ZP_03032827.1| OmpA domain protein [Escherichia coli F11]
gi|300976455|ref|ZP_07173440.1| OmpA family protein [Escherichia coli MS 200-1]
gi|110344551|gb|ABG70788.1| putative OmpA-family membrane protein [Escherichia coli 536]
gi|190908577|gb|EDV68166.1| OmpA domain protein [Escherichia coli F11]
gi|300308536|gb|EFJ63056.1| OmpA family protein [Escherichia coli MS 200-1]
gi|324015357|gb|EGB84576.1| OmpA family protein [Escherichia coli MS 60-1]
Length = 550
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 2/126 (1%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGH 88
P+ + ++ + + + FD ++ +VL + L + K L+ G+
Sbjct: 414 PPEQKMEVTASLQVQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGY 473
Query: 89 ADELGSRNSSIALGLRRAYAVFNY-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
D G S+ L LRRA AV N+ I A+ V G+ P+ A NR
Sbjct: 474 TDATGDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNR 533
Query: 148 RAIVFL 153
R + L
Sbjct: 534 RVEISL 539
>gi|302326566|gb|ADL25767.1| OmpA family protein [Fibrobacter succinogenes subsp. succinogenes
S85]
Length = 215
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 2/139 (1%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
+ S + +D + ++ + S+ D + FD +++ + L+ +
Sbjct: 70 LEASKNEAMDKLNALQSQMIQVTKDARGIILSMSD-ILFDVGRATLKTDLMTSLAKIAGI 128
Query: 76 LE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
L D IEG+ D GS ++ L +RA V + V +GI+ +R+ G MP
Sbjct: 129 LSVYQQFDVSIEGNTDNTGSEEFNMTLSQQRAENVMKFLVEQGIAETRLTAKGLGMTMPI 188
Query: 135 VYGHDEDAYAKNRRAIVFL 153
++ KNRR + +
Sbjct: 189 ADNSTKEGRQKNRRVDLVI 207
>gi|229589734|ref|YP_002871853.1| hypothetical protein PFLU2242 [Pseudomonas fluorescens SBW25]
gi|229361600|emb|CAY48478.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
Length = 295
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 49/132 (37%), Gaps = 1/132 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-D 80
+ +I++ +E Q + V V F T I P + L L++
Sbjct: 161 ETKPVQITAGLLPASELKAQIDKTGKVALHVNFATDQTRILPDSQPQIEQLSQLLKQDAS 220
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
I G+ D G + L RA AV A+GI A+R+ +G P E
Sbjct: 221 LKLAINGYTDRTGDPAHNKTLSYDRAKAVVAAITAKGIDAARLSAAGFGDADPVADNVTE 280
Query: 141 DAYAKNRRAIVF 152
A+NRR +
Sbjct: 281 AGKAQNRRVELV 292
>gi|109947175|ref|YP_664403.1| peptidoglycan-associated lipoprotein precursor [Helicobacter
acinonychis str. Sheeba]
gi|109714396|emb|CAJ99404.1| peptidoglycan-associated lipoprotein precursor [Helicobacter
acinonychis str. Sheeba]
Length = 181
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 70/146 (47%), Gaps = 11/146 (7%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVG-----------DSVFFDTSSYSIRPADIQ 67
+G+ + + + V+ + + +E + +V S++FD Y I+ +D +
Sbjct: 34 TGVKAVQNAPVNTEPVVEKEAPKEDLAPAVEKKPAIESGTIIASIYFDFDKYEIKDSDQE 93
Query: 68 VLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
L + +++ L+EG+ DE GS + ALG++R +V N V +G+ +K S
Sbjct: 94 TLDEIVQKAKENHMQVLLEGNTDEFGSSEYNQALGVKRTLSVKNALVIKGVEKDMIKTIS 153
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFL 153
+G+ P ++ Y +NRR V L
Sbjct: 154 FGEIKPKCIQKTKECYKENRRVDVKL 179
>gi|4322001|gb|AAD15905.1| sodium-driven polar flagellar protein [Vibrio parahaemolyticus]
Length = 315
Score = 73.3 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 46/128 (35%), Gaps = 5/128 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ +L +Q + + F S ++P ++ + ++ I GH D
Sbjct: 174 QGAIEVENLGQQIVIRMREKGAFPEGSAFLQPKFRPLVRQIAELVKDVPGIVRISGHTDN 233
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S+ L +RA +V RG S R++V P V ++ A N
Sbjct: 234 QRLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRLRVRGMADTEPLVPNDSDENRALN 293
Query: 147 RRAIVFLK 154
RR + +
Sbjct: 294 RRVEISIM 301
>gi|326799849|ref|YP_004317668.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
gi|326550613|gb|ADZ78998.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
Length = 302
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 47/114 (41%), Gaps = 6/114 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD----ELGSRNSSIA 100
S+ D++ + + SY I PA + L + ++ + + LIEG+ D + ++
Sbjct: 156 ISLSDNMLYKSGSYEISPAAGETLGKIAKIIMDYKEYEVLIEGNTDNVPISQKNIRNNWD 215
Query: 101 LGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V G+ R+ G+ P E +NRR + +
Sbjct: 216 LSALRASSVVQALQNDYGVDPKRLTAGGRGEYNPIASNDTEAGRTRNRRTQIII 269
>gi|258627656|ref|ZP_05722431.1| Outer membrane protein A [Vibrio mimicus VM603]
gi|258580055|gb|EEW05029.1| Outer membrane protein A [Vibrio mimicus VM603]
Length = 194
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIA 100
+ + +++ FDT S + Q L + +L D ++EGH D G++ + +
Sbjct: 77 DYPMIKLKNTIKFDTGSAKVSVQSKQWLDRMAQFLASESGIDIVLEGHTDNTGTQKFNDS 136
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
L +RA +V V R ++ + + YG+ +P+ ++ A NRR V
Sbjct: 137 LSEKRASSVKTALVQRQVAQNAIYTRGYGEHVPACTNKTKNGRACNRRVEV 187
>gi|302875899|ref|YP_003844532.1| OmpA/MotB domain-containing protein [Clostridium cellulovorans
743B]
gi|307689333|ref|ZP_07631779.1| chemotaxis MotB protein [Clostridium cellulovorans 743B]
gi|302578756|gb|ADL52768.1| OmpA/MotB domain protein [Clostridium cellulovorans 743B]
Length = 245
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 50/118 (42%), Gaps = 5/118 (4%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RN 96
++ S+ D + F++ ++ +L+ + + D I GH D +
Sbjct: 126 KDGLYISIQDVILFNSGDANVLKEVSPLLTEISHLIRDIDNRIRIVGHTDNVPISTVKFR 185
Query: 97 SSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA V N+ ++ ++ + +YG+ MP + A+NRR +F+
Sbjct: 186 SNWDLSAMRAINVMNFMVDTGKLNPEKVSIQAYGEYMPRFDNSTAENRARNRRVEIFI 243
>gi|77361278|ref|YP_340853.1| flagellar motor protein MotB [Pseudoalteromonas haloplanktis
TAC125]
gi|76876189|emb|CAI87411.1| sodium-driven polar flagellar protein [Pseudoalteromonas
haloplanktis TAC125]
Length = 306
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 52/132 (39%), Gaps = 5/132 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
D + SL +Q + ++ F + S ++P ++ +G L+ + + GH D+
Sbjct: 166 DGAIELESLGQQIIIRIRENGSFPSGSAFLQPKFKPIIQEIGVLLKDVPGEITVSGHTDD 225
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
++ L +RA AV + +RM V + P V + +N
Sbjct: 226 FQVSNELYINNWDLSSKRAVAVASELQKVVGFDKNRMMVVGRAETRPLVPNDSNEDRRRN 285
Query: 147 RRAIVFLKGCRA 158
RR + + +A
Sbjct: 286 RRVEISILQGKA 297
>gi|323491313|ref|ZP_08096498.1| putative outer membrane protein [Vibrio brasiliensis LMG 20546]
gi|323314439|gb|EGA67518.1| putative outer membrane protein [Vibrio brasiliensis LMG 20546]
Length = 222
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
V E + Q + + + F +SSY + + L + +E D +I+GH D
Sbjct: 96 SGVQVERVGENQLLLRLENGIGFQSSSYQLDSSIHNTLRGVAQILVEYPDTSLVIDGHTD 155
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS ++ L RRA +V +Y V++G++A R G+ P + A NRR
Sbjct: 156 STGSDTTNQVLSERRAESVRSYLVSQGVAAGRAIARGNGERYPLCTNSTTEGRACNRRVE 215
Query: 151 VFL 153
+ +
Sbjct: 216 IQI 218
>gi|307823678|ref|ZP_07653906.1| peptidoglycan-associated lipoprotein [Methylobacter tundripaludum
SV96]
gi|307734972|gb|EFO05821.1| peptidoglycan-associated lipoprotein [Methylobacter tundripaludum
SV96]
Length = 191
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 76/191 (39%), Gaps = 35/191 (18%)
Query: 1 MQYSTIFIILSAITM-MSISGIDNLDTKISSPDTVLN----------------------- 36
M+ + + L+ + +S D D ++
Sbjct: 1 MKLNKTVLALAISAVILSGCSEDEKDASLTDGTQNTASGINDASTSGLNNGSGLSGSEMN 60
Query: 37 ----------ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLI 85
+ + +++F S ++ + V++ + + ++
Sbjct: 61 ASGMYPNAGIGPEFSDPNNPLSKSTIYFMLDSSQVQDDFVPVIAAHAQYLVAHPGQRVVM 120
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
EGH DE GSR +IALG +RA ++ + +G++ +++V SYG+E P+ GHDE ++
Sbjct: 121 EGHGDERGSREYNIALGEQRAKSIASMMKVQGVADGQLEVVSYGEEKPASLGHDEASWEL 180
Query: 146 NRRAIVFLKGC 156
NRR + +G
Sbjct: 181 NRRVELVYQGK 191
>gi|332188277|ref|ZP_08390004.1| ompA family protein [Sphingomonas sp. S17]
gi|332011673|gb|EGI53751.1| ompA family protein [Sphingomonas sp. S17]
Length = 175
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 52/136 (38%), Gaps = 8/136 (5%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHA 89
SP ++ + ++ F + L L + ++ GH+
Sbjct: 42 SPGATARSAAKPPAQPDASATTIGFPEGGAELDREAKAALDRLAADPAVRQGHLILRGHS 101
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG------HDEDAY 143
D G + + +RA A +Y +GI+++RMKV + G+ P D
Sbjct: 102 DSDGDDAGNRRMSRQRAEAARDYLAGKGIASARMKVIALGETRPIAPNAKPDGTDDSAGR 161
Query: 144 AKNRRAIVFLKGCRAN 159
A+NRR + L RAN
Sbjct: 162 ARNRRVEIEL--DRAN 175
>gi|156973487|ref|YP_001444394.1| flagellar motor protein MotB [Vibrio harveyi ATCC BAA-1116]
gi|156525081|gb|ABU70167.1| hypothetical protein VIBHAR_01177 [Vibrio harveyi ATCC BAA-1116]
Length = 314
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 44/128 (34%), Gaps = 5/128 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ +L +Q + + F S ++P ++ + ++ + GH D
Sbjct: 173 QGAIEVENLGQQIVIRMREKGAFPEGSAFLQPKFRPLVRQIAELVKDVPGIVRVSGHTDN 232
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S+ L +RA +V RG S R++V P + A N
Sbjct: 233 QPLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRLRVRGMADTEPLAPNDSDANRALN 292
Query: 147 RRAIVFLK 154
RR + +
Sbjct: 293 RRVEISIM 300
>gi|50956536|gb|AAT90783.1| conserved hypothetical protein [uncultured proteobacterium QS1]
Length = 575
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 39/103 (37%), Gaps = 2/103 (1%)
Query: 53 FFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
F S ++P +VL L + + +I GH D GS ++ L RA +V +
Sbjct: 446 LFAPGSAELKPGSTKVLIAALVNIKAQPGWLIVIAGHTDVTGSPEQNLELSRARAASVRD 505
Query: 112 YFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ G V +G P E A NRR + L
Sbjct: 506 WMQRMGDIPDSCFAVQGFGANQPVASNDTEVGRAANRRVDIRL 548
>gi|107025501|ref|YP_623012.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
gi|116693317|ref|YP_838850.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
HI2424]
gi|170737407|ref|YP_001778667.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
MC0-3]
gi|105894875|gb|ABF78039.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
gi|116651317|gb|ABK11957.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424]
gi|169819595|gb|ACA94177.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3]
Length = 221
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 1/110 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNSSIALGLR 104
++ F T ++ P + L L ++ + G D +GS + ++AL R
Sbjct: 111 VNLSGDALFATDHATLAPTARESLDRLLSERADRTYSQVTVTGFTDSVGSDDYNLALSKR 170
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RA +V Y A G+ + V+ GK P + A NRR + L+
Sbjct: 171 RAESVAAYLKAHGLKTDSITVSGRGKADPVASNATPEGRASNRRVEIRLQ 220
>gi|323699159|ref|ZP_08111071.1| OmpA/MotB domain protein [Desulfovibrio sp. ND132]
gi|323459091|gb|EGB14956.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans ND132]
Length = 351
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/102 (25%), Positives = 41/102 (40%), Gaps = 1/102 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
++ F Y I + VL E + I GH D G+ + L RRA +V
Sbjct: 247 NLNFGFDKYQITDEMVPVLEQAKMILEEDTAATYEISGHTDSTGTEAYNQGLSERRANSV 306
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ G+SA R++ YG+ P ++ NRR +
Sbjct: 307 MKWLTDNGVSADRLEAKGYGELAPKYDNATKEGRKLNRRVEI 348
>gi|238799328|ref|ZP_04642769.1| hypothetical protein ymoll0001_24410 [Yersinia mollaretii ATCC
43969]
gi|238716817|gb|EEQ08692.1| hypothetical protein ymoll0001_24410 [Yersinia mollaretii ATCC
43969]
Length = 574
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 40/103 (38%), Gaps = 2/103 (1%)
Query: 53 FFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FD ++ +VL N L K ++ GH D G S+ L L+RA +V N
Sbjct: 443 LFDVGKSELKSGSTKVLINALVGIKAKPGWLIVVAGHTDITGDSQSNQILSLKRAESVRN 502
Query: 112 YFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ G V YG+ P E A NRR + L
Sbjct: 503 WMRDTGDIPESCFAVQGYGQSRPLKSNDTEAGRALNRRVEISL 545
>gi|91224215|ref|ZP_01259478.1| putative outer membrane protein OmpA [Vibrio alginolyticus 12G01]
gi|269965628|ref|ZP_06179741.1| putative outer membrane protein OmpA [Vibrio alginolyticus 40B]
gi|91191126|gb|EAS77392.1| putative outer membrane protein OmpA [Vibrio alginolyticus 12G01]
gi|269829696|gb|EEZ83932.1| putative outer membrane protein OmpA [Vibrio alginolyticus 40B]
Length = 326
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+V FD S ++ + + I G++D GS + L +RA AV
Sbjct: 213 TVQFDLESAEVK-DASNLSGTVDLMNTYPQAQVEITGYSDTTGSAAYNKQLTEKRAKAVA 271
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
+ F A+GI+A RM V G+ P NRR V + T
Sbjct: 272 DEFQAKGIAAERMTVKGMGEANPVASNETRQGRQMNRRVEVVVPAFEYQT 321
>gi|325067556|ref|ZP_08126229.1| OmpA/MotB domain protein [Actinomyces oris K20]
Length = 336
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 56/142 (39%), Gaps = 3/142 (2%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+G ++T + D + ++ + +V V F T S + VL+ + ++K
Sbjct: 15 AGPFKIETMSLAADDSSDTKQDEKSTTVTVAGDVTFATDSDQLSAQADSVLATVVEQIKK 74
Query: 79 HDC--DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSV 135
+ + I GH D++ + L RRA AV ++ V+ G+ P V
Sbjct: 75 YPSGGELTITGHIDDVADDAHNQDLSERRAKAVSERLKKLTDLSAWKESVSGKGESSPRV 134
Query: 136 YGHDEDAYAKNRRAIVFLKGCR 157
++ NRR + L +
Sbjct: 135 ANDTDEHRQINRRVEITLTPSK 156
>gi|302670731|ref|YP_003830691.1| flagellar motor protein MotB [Butyrivibrio proteoclasticus B316]
gi|302395204|gb|ADL34109.1| flagellar motor protein MotB [Butyrivibrio proteoclasticus B316]
Length = 277
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 55/129 (42%), Gaps = 7/129 (5%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHAD 90
+ V++ + + ++ S+ FD+ I+ I V+ +G LE + IEGH D
Sbjct: 141 EDVVSLNYTSQFVQLTIQGSILFDSGKVEIKSDAIPVIDKVGQILESYAGGTVDIEGHTD 200
Query: 91 ELGS-----RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYA 144
+ ++ L RA AVFNY V + + T G+ P ++ +
Sbjct: 201 NVPMSSGGKYANNDELSSGRALAVFNYLVENTTLDPANLIHTGRGEYDPIADNSTDEGRS 260
Query: 145 KNRRAIVFL 153
+NRR + +
Sbjct: 261 RNRRVEIKI 269
>gi|292492681|ref|YP_003528120.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4]
gi|291581276|gb|ADE15733.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4]
Length = 282
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 44/123 (35%), Gaps = 5/123 (4%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR----NS 97
EQ + + F + S S VL L + L + + ++ GH D+L S
Sbjct: 146 EQIIIRIQEKGSFPSGSASFNQDFKPVLDKLRTVLNRIEGKIVVAGHTDDLPIHTSRFRS 205
Query: 98 SIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
+ L RA +V ++ A R + + P + NRR + +
Sbjct: 206 NWELSTARAVSVIHHLFATDEIAPQRFVIEGHADTQPLAPNDTAENRVHNRRIEITIMPS 265
Query: 157 RAN 159
++
Sbjct: 266 TSS 268
>gi|126173599|ref|YP_001049748.1| flagellar motor protein MotB [Shewanella baltica OS155]
gi|152999879|ref|YP_001365560.1| flagellar motor protein MotB [Shewanella baltica OS185]
gi|160874504|ref|YP_001553820.1| flagellar motor protein MotB [Shewanella baltica OS195]
gi|217974157|ref|YP_002358908.1| flagellar motor protein MotB [Shewanella baltica OS223]
gi|304409470|ref|ZP_07391090.1| OmpA/MotB domain protein [Shewanella baltica OS183]
gi|307303828|ref|ZP_07583581.1| OmpA/MotB domain protein [Shewanella baltica BA175]
gi|125996804|gb|ABN60879.1| OmpA/MotB domain protein [Shewanella baltica OS155]
gi|151364497|gb|ABS07497.1| OmpA/MotB domain protein [Shewanella baltica OS185]
gi|160860026|gb|ABX48560.1| OmpA/MotB domain protein [Shewanella baltica OS195]
gi|217499292|gb|ACK47485.1| OmpA/MotB domain protein [Shewanella baltica OS223]
gi|304351988|gb|EFM16386.1| OmpA/MotB domain protein [Shewanella baltica OS183]
gi|306912726|gb|EFN43149.1| OmpA/MotB domain protein [Shewanella baltica BA175]
gi|315266742|gb|ADT93595.1| OmpA/MotB domain protein [Shewanella baltica OS678]
Length = 310
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 5/133 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
D + SL +Q + + F + S ++P V+ ++G L+ + G+ D
Sbjct: 166 TDGAIEIESLGQQIIIRIREKGAFASGSGFLQPRFKPVVRSVGELLKDVPGIITVSGYTD 225
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
++ +S+ L +RA AV + V +G + RMKV P V + A+
Sbjct: 226 DMQISDELYSSNWDLSSKRAVAVAHELVQVKGFDSKRMKVVGMASNNPIVPNDSPENRAR 285
Query: 146 NRRAIVFLKGCRA 158
NRR + ++ +A
Sbjct: 286 NRRVEIAIEQGKA 298
>gi|284039059|ref|YP_003388989.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
gi|283818352|gb|ADB40190.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
Length = 427
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 58/136 (42%), Gaps = 2/136 (1%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
S D L T N ++ ++ + ++F+ S Y ++P L L + +
Sbjct: 290 SQSDTLVTNRVDVARDFNLVPIEAGAKITLKN-IYFNVSKYDLKPESYPELDRLVTVMRS 348
Query: 79 HD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+ +EGH D +G ++++ L R V Y V +GISASR++ YG P
Sbjct: 349 NPTMQIRLEGHTDTVGEFDANVELSRNRVNEVKRYLVDKGISASRIETVGYGPSRPINTN 408
Query: 138 HDEDAYAKNRRAIVFL 153
+NRR + +
Sbjct: 409 KSLKERPENRRVEMVI 424
>gi|332886461|gb|EGK06705.1| hypothetical protein HMPREF9456_00579 [Dysgonomonas mossii DSM
22836]
Length = 224
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/123 (26%), Positives = 52/123 (42%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+ + + + + F T+S ++ A LSN + D D I GH D
Sbjct: 88 GAQVESINDGQAIKVTFESGILFATNSSTLSSASQSALSNFAASLNNNPDTDVQIYGHTD 147
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + L +RA AV+N+ +G+S SRM +G P A+NRR
Sbjct: 148 NTGSDAINNPLSEKRAQAVYNFLQTKGVSGSRMVSQGFGSTQPVADNSSVAGRAQNRRVE 207
Query: 151 VFL 153
V++
Sbjct: 208 VYI 210
>gi|306812301|ref|ZP_07446499.1| OmpA family membrane protein [Escherichia coli NC101]
gi|305854339|gb|EFM54777.1| OmpA family membrane protein [Escherichia coli NC101]
Length = 550
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 2/126 (1%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGH 88
P+ + ++ + + + FD ++ +VL + L + K L+ G+
Sbjct: 414 PPEQKMEVTASLQVQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGY 473
Query: 89 ADELGSRNSSIALGLRRAYAVFNY-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
D G S+ L LRRA AV N+ I A+ V G+ P+ A NR
Sbjct: 474 TDATGDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNR 533
Query: 148 RAIVFL 153
R + L
Sbjct: 534 RVEISL 539
>gi|296284884|ref|ZP_06862882.1| outer membrane protein [Citromicrobium bathyomarinum JL354]
Length = 210
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/176 (15%), Positives = 62/176 (35%), Gaps = 22/176 (12%)
Query: 7 FIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDS--------------- 51
I+L+ ++ + + + S E S D
Sbjct: 1 MIVLALGALLVACNSEEPSPAPTPTPSATGSDSPPENNSIIRPDIEVERPPIALEPLRTT 60
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+ F + + L+ L + K ++ GH+D G ++ + RA AV
Sbjct: 61 IPFGAGGTELDETAMAELNGLLDTDQWKQVERVILRGHSDAGGPDRVNMRVSEERAQAVA 120
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYG------HDEDAYAKNRRAIVFLKGCRANT 160
++ + +G++ ++++ ++G + P +E A NRR + + + T
Sbjct: 121 DWLMEQGLTEDQIRIIAFGAQNPVQPNLLPNGEPNERGRAANRRVEITILVPKGAT 176
>gi|283853943|ref|ZP_06371147.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B]
gi|283570664|gb|EFC18720.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B]
Length = 357
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 43/137 (31%), Gaps = 6/137 (4%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDC 81
D K + +E + D + F + S I P +VL + + + D
Sbjct: 77 VADLKGEVDSKEIRVRQFREMLEINFVDKILFGSGSADISPRGREVLLKVAAVLGKVKDK 136
Query: 82 DFLIEGHADELGSR----NSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVY 136
+ GH D S+ L R+ +V + G + R P
Sbjct: 137 SIYVVGHTDAQPIHSALYPSNWELSTARSSSVIRFLSETGGLTPERFTAMGRSFYQPVAS 196
Query: 137 GHDEDAYAKNRRAIVFL 153
+ +NRR + +
Sbjct: 197 NATAEGRQENRRVDIIV 213
>gi|114778503|ref|ZP_01453347.1| OmpA/MotB [Mariprofundus ferrooxydans PV-1]
gi|114551228|gb|EAU53787.1| OmpA/MotB [Mariprofundus ferrooxydans PV-1]
Length = 325
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 2/105 (1%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYA 108
+ FDT S I+ + + L+ + ++ GH D G ++ L RRA A
Sbjct: 219 HQIHFDTDSDIIKADSRPAIDQIALMLKNNPDLKIILVGHTDNQGDLQYNMDLSQRRAKA 278
Query: 109 VFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
V N + GI +R+ G P + A+NRR +
Sbjct: 279 VMNSLESDYGIKRARLGAAGIGYLAPIASNRSAEGRAENRRVEII 323
>gi|254381948|ref|ZP_04997311.1| secreted protein [Streptomyces sp. Mg1]
gi|194340856|gb|EDX21822.1| secreted protein [Streptomyces sp. Mg1]
Length = 262
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 45/140 (32%), Gaps = 2/140 (1%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
+++ + ++ + + ++ V F S + + +
Sbjct: 116 VLAAPKVLDMVEVVEDLGGEQRRQETNQTVMMALQSEVLFPEDSSVFNAQAAARIQAIAN 175
Query: 75 -WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEM 132
++ + G D+ GS L +RA AV + S + V Y ++
Sbjct: 176 EINQQKATRVRVFGFTDDQGSYEHGKELSKKRADAVQVELAKTVTNPSVIFDVRGYSEDY 235
Query: 133 PSVYGHDEDAYAKNRRAIVF 152
P E+ KNRR +
Sbjct: 236 PIADNGTEEGRKKNRRVEIT 255
>gi|261252277|ref|ZP_05944850.1| Flagellar motor rotation protein MotB [Vibrio orientalis CIP
102891]
gi|260935668|gb|EEX91657.1| Flagellar motor rotation protein MotB [Vibrio orientalis CIP
102891]
Length = 313
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 45/128 (35%), Gaps = 5/128 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ +L +Q + + F S ++P ++ + ++ + GH D
Sbjct: 172 QGAIEVENLGQQIDIRIREKGAFPEGSAFLQPKFRPLVRQIADLVKDVPGRIRVSGHTDN 231
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S+ L +RA +V RG + R++V P E ++N
Sbjct: 232 QRIDSELYRSNWDLSAQRAVSVAQEMEKVRGFNHERLRVRGMADTEPLGPNDTEAQRSRN 291
Query: 147 RRAIVFLK 154
RR + +
Sbjct: 292 RRVEISIM 299
>gi|153835783|ref|ZP_01988450.1| PomB [Vibrio harveyi HY01]
gi|148867501|gb|EDL66863.1| PomB [Vibrio harveyi HY01]
Length = 314
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 44/128 (34%), Gaps = 5/128 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ +L +Q + + F S ++P ++ + ++ + GH D
Sbjct: 173 QGAIEVENLGQQIVIRMREKGAFPEGSAFLQPKFRPLVRQIAELVKDVPGIVRVSGHTDN 232
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S+ L +RA +V RG S R++V P + A N
Sbjct: 233 QPLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRLRVRGMADTEPLAPNDSDANRALN 292
Query: 147 RRAIVFLK 154
RR + +
Sbjct: 293 RRVEISIM 300
>gi|295681051|ref|YP_003609625.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
gi|295440946|gb|ADG20114.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
Length = 559
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 2/113 (1%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIAL 101
+ ++ + + FDT +++P L + + D LI GH D +G ++ L
Sbjct: 440 PLAVTIDNFLLFDTGKTTLKPGAEPRLKGVLDLIRANPDKRILIAGHTDNVGPSVANQKL 499
Query: 102 GLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA A+ ++FV + +R + YG P NRR + L
Sbjct: 500 SEARAQAIRDWFVNTASLSVTRFAIQGYGDTRPIASNESRQGREMNRRVEISL 552
>gi|114777572|ref|ZP_01452553.1| motb protein [Mariprofundus ferrooxydans PV-1]
gi|114552043|gb|EAU54560.1| motb protein [Mariprofundus ferrooxydans PV-1]
Length = 232
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 50/119 (42%), Gaps = 5/119 (4%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----- 94
L ++ + D++ FD S ++P ++ L L L + ++GH +
Sbjct: 112 LNDRLYLRIPDAILFDRGSAVLKPESVKTLVKLAQMLAMSPGNIRVQGHTNANIDLDNSA 171
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +L L RA +V + G+S +R+ + YG P +KNRR + +
Sbjct: 172 FDDPWSLSLARAASVLHILEDEGVSPTRLSLAGYGPSQPISTEATPFGRSKNRRVEIMV 230
>gi|302037323|ref|YP_003797645.1| hypothetical protein NIDE1997 [Candidatus Nitrospira defluvii]
gi|300605387|emb|CBK41720.1| conserved exported protein of unknown function, putative Outer
membrane protein OmpA [Candidatus Nitrospira defluvii]
Length = 325
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 2/103 (1%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
++FDT+ +RP L + + L+ + L+ GH D +GS + L RRA+AV
Sbjct: 221 LYFDTNKAELRPDSEPTLQEMATLLKGRPQLKLLVVGHTDNIGSYEENGILSQRRAHAVI 280
Query: 111 NYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
N ++ A R+ P E+ AKNRR +
Sbjct: 281 NALASKHGIAKARLTPVGDSFSAPIASNKTEEGRAKNRRVELV 323
>gi|300771828|ref|ZP_07081699.1| OmpA/MotB domain protein [Sphingobacterium spiritivorum ATCC 33861]
gi|300761214|gb|EFK58039.1| OmpA/MotB domain protein [Sphingobacterium spiritivorum ATCC 33861]
Length = 650
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 53/122 (43%), Gaps = 6/122 (4%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRN 96
+ E+ +S V +++++D Y+IR +L+ L + + + H D +
Sbjct: 526 QPVMEKGTSFVLENIYYDLDKYNIRDDAKPILNQLARTMRDNPGLRVELSSHTDSRATAK 585
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH-----DEDAYAKNRRAIV 151
++ L RA + +Y V+RGI+ +R+ YG+ E + NRR +
Sbjct: 586 YNMKLSQSRAQSAVDYIVSRGIARNRLIAKGYGESQLVNNCKDGVSCTEAQHQANRRTEI 645
Query: 152 FL 153
+
Sbjct: 646 KI 647
>gi|302878266|ref|YP_003846830.1| OmpA/MotB domain-containing protein [Gallionella capsiferriformans
ES-2]
gi|302581055|gb|ADL55066.1| OmpA/MotB domain protein [Gallionella capsiferriformans ES-2]
Length = 281
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 42/119 (35%), Gaps = 4/119 (3%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS---- 94
+ + S F ++P + L + L + + +EGH D++
Sbjct: 118 QTKRGVVVDISASTLFREGEEKLQPGAQETLQQVAVVLSRENQSVEVEGHTDDVPIKTTQ 177
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA +V V G+ R+ P V + AKNRR + +
Sbjct: 178 FPSNWELSSGRASSVVRTLVTYGVPEKRLAAVGMAANQPVVANDTPENRAKNRRVSITI 236
>gi|119504265|ref|ZP_01626345.1| peptidoglycan-associated lipoprotein [marine gamma proteobacterium
HTCC2080]
gi|119459773|gb|EAW40868.1| peptidoglycan-associated lipoprotein [marine gamma proteobacterium
HTCC2080]
Length = 182
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/107 (35%), Positives = 58/107 (54%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRR 105
S G +FD S S+ + + L +D +EGH DE G+R ++ALG RR
Sbjct: 76 MSAGTVFYFDFDSSSMTDTARMAVDAHIAVLLSNDDSVRLEGHTDERGTREYNLALGERR 135
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
A AV +Y VA G+ + R++ SYG+E P +G E +++NRR +
Sbjct: 136 ANAVRDYMVANGVPSYRIESISYGEENPVAFGSSEANWSQNRRVELK 182
>gi|78189221|ref|YP_379559.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins-like [Chlorobium chlorochromatii CaD3]
gi|78171420|gb|ABB28516.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins-like protein [Chlorobium chlorochromatii
CaD3]
Length = 422
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRA 106
V + FD + +I+P + ++ + +++H F +EGH D G+ ++ L RA
Sbjct: 315 VTTGITFDINKATIKPESMGTINYVVKMMQEHPELKFSVEGHTDSDGADANNQTLSEARA 374
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
A+ N + GI+ R+ +G+ P + A+NRR
Sbjct: 375 QAIVNKLIESGIAKERLTSKGWGESKPITNNETAEGKAQNRRVEFI 420
>gi|84391232|ref|ZP_00991563.1| outer membrane protein [Vibrio splendidus 12B01]
gi|84376521|gb|EAP93399.1| outer membrane protein [Vibrio splendidus 12B01]
Length = 222
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
V E + Q + + + F + SY++ + L + +E D +I+GH D
Sbjct: 96 SGVQVERVGENQLLLRLENGIGFGSGSYALESSIHNTLRGVARILVEYPDTSLVIDGHTD 155
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS +S+ L RRA +V + +++ ++A R G+ P + A NRR
Sbjct: 156 STGSESSNQILSERRAESVRAFLISQDVAAGRAIARGNGERYPLCDNNTSQGRACNRRVE 215
Query: 151 VFL 153
+ +
Sbjct: 216 IQI 218
>gi|157164304|ref|YP_001466351.1| Omp18 [Campylobacter concisus 13826]
gi|112800114|gb|EAT97458.1| Omp18 [Campylobacter concisus 13826]
Length = 168
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/166 (22%), Positives = 75/166 (45%), Gaps = 13/166 (7%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESS----LQEQFSSSVGDS----- 51
M+ + + A ++S N + +++ ++S ++ ++ + +
Sbjct: 1 MKKVVLASVAVATLLLSGCSSKNPEVDMNANSNQSADNSGSMSDADRLAALIANIESQVK 60
Query: 52 -VFFDTSSYSIRPADIQVLSNLGSWLEK---HDCDFLIEGHADELGSRNSSIALGLRRAY 107
V+FD ++I+ V+S+ S + +EG+ DE G+ + ALGL+RA
Sbjct: 61 SVYFDFDKFNIKADQQGVVSSNASVFNQADAQALSIKVEGNCDEWGTDEYNYALGLKRAK 120
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ + V G+SA R+ V S+G+ P + A+NRRA +
Sbjct: 121 SAKDALVRNGVSADRIAVVSFGESNPVCTDKTKACDAQNRRADFKV 166
>gi|294498805|ref|YP_003562505.1| chemotaxis protein MotB [Bacillus megaterium QM B1551]
gi|294348742|gb|ADE69071.1| chemotaxis protein MotB [Bacillus megaterium QM B1551]
Length = 277
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 49/128 (38%), Gaps = 6/128 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
L S +E S+ D+V FD+ +R D ++ +++ + + +I GH D
Sbjct: 142 TNQLQTSLTEEGLLISIRDNVLFDSGRAQVRSEDTKIANDISELLVIDPPRNIIISGHTD 201
Query: 91 ELGSRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ RN+ R + ++ S +G+ P + + AK
Sbjct: 202 NVPIRNAGFESNWELSVMRAVNFMKVILKNDKLNPSMFSAKGFGEFKPVTSNNTAEGQAK 261
Query: 146 NRRAIVFL 153
NRR + +
Sbjct: 262 NRRVEILI 269
>gi|254390197|ref|ZP_05005416.1| secreted protein [Streptomyces clavuligerus ATCC 27064]
gi|294814756|ref|ZP_06773399.1| Putative secreted protein [Streptomyces clavuligerus ATCC 27064]
gi|326443135|ref|ZP_08217869.1| secreted protein [Streptomyces clavuligerus ATCC 27064]
gi|197703903|gb|EDY49715.1| secreted protein [Streptomyces clavuligerus ATCC 27064]
gi|294327355|gb|EFG08998.1| Putative secreted protein [Streptomyces clavuligerus ATCC 27064]
Length = 250
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 42/126 (33%), Gaps = 2/126 (1%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIE 86
+ S ++ V F S+ + P ++ + + ++ +
Sbjct: 114 VESEGGEERREQTTVSLKFALQAEVLFGRDSHELNPRANSRIAAIAEEIRRNGAKQVRVF 173
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAK 145
G D+LGS L +RA AV + V Y ++ P E+ K
Sbjct: 174 GFTDDLGSYRHGRTLSRKRADAVHAMLDGQVEDHTVSYIVRGYSEDFPIADNSTEEGREK 233
Query: 146 NRRAIV 151
NRR V
Sbjct: 234 NRRVEV 239
>gi|332999380|gb|EGK18965.1| ompA family protein [Shigella flexneri VA-6]
Length = 160
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 54/149 (36%), Gaps = 3/149 (2%)
Query: 8 IILSAITMMSISGIDNL-DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADI 66
+I +++ + + + + +S + D++ F + Y + P
Sbjct: 9 LIFTSLILTGCQSPQGKFTPEQVAAMQSYGFTESAGDWSLGLSDAILFAKNDYKLLPESQ 68
Query: 67 QVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMK 124
Q L + + L ++GH D G + + L L+RA V + + G +
Sbjct: 69 QQLQTMAAKLASTGLTHARMDGHTDNYGEDSYNEGLSLKRANVVADAWAIGGQIPRSNLT 128
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
GK+ P A+NRR V +
Sbjct: 129 TQGLGKKYPIASNKTAQGRAENRRVAVVI 157
>gi|224369398|ref|YP_002603562.1| ExeA2 [Desulfobacterium autotrophicum HRM2]
gi|223692115|gb|ACN15398.1| ExeA2 [Desulfobacterium autotrophicum HRM2]
Length = 555
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 39/103 (37%), Gaps = 1/103 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
V F ++ ++ L+ + ++G+ D G++ +I L RA V
Sbjct: 450 VRFGYNNNDFTDQALKDLTKFAGSLVAHPGAKVSVKGYTDANGNQTYNIKLSEFRANIVK 509
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ + RG ++K G E P NRR + +
Sbjct: 510 SFLLGRGARLDQIKTQGMGSENPIATNDTAQGRMMNRRVEIEV 552
>gi|119944499|ref|YP_942179.1| OmpA domain-containing protein [Psychromonas ingrahamii 37]
gi|119863103|gb|ABM02580.1| OmpA domain protein [Psychromonas ingrahamii 37]
Length = 195
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 6/147 (4%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVF-----FDTSSYSIRPADI 66
A ++ + KI + + E + +E + D++ FD + I+P
Sbjct: 48 AAMELAAMERAAEENKIETDGLQVVELTEEELMAQQYSDAILQKTIQFDFDTSMIKPEFT 107
Query: 67 QVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
+L + + IEGH DE G+ +IAL RRA +V Y G+ ++ V
Sbjct: 108 SILDAHAKFLVNNPSKKVTIEGHTDEKGTPGYNIALSERRAMSVSVYLENMGVLPDQISV 167
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVF 152
SYG+E P +GH E ++A NRRA +
Sbjct: 168 VSYGEEKPLNFGHSEASWADNRRAELV 194
>gi|66967954|gb|AAY59422.1| outer membrane protein A [Allochromatium vinosum]
Length = 225
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 40/113 (35%), Gaps = 1/113 (0%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNSSIAL 101
Q + + F+ S IRP L + + + GH D G+ + L
Sbjct: 108 QLLVGMTGATAFEVDSDRIRPGFYSTLEKISAIVRKYGKTQLAVSGHTDSTGAAAYNQTL 167
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RRA +V Y G+ R+ YG P ED NRR + +
Sbjct: 168 SERRAASVGYYLERSGVLPQRIYSAGYGMNQPIASNATEDGRRLNRRVDILIM 220
>gi|162448691|ref|YP_001611058.1| outer membrane protein [Sorangium cellulosum 'So ce 56']
gi|161159273|emb|CAN90578.1| Probable outer membrane protein [Sorangium cellulosum 'So ce 56']
Length = 351
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 39/118 (33%), Gaps = 7/118 (5%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSS--- 98
Q V F+ + + P L ++ L F + H D S
Sbjct: 211 QLVIEVPSDALFNGARAELTPEGRAALDDIAGVLRTMPAFRFQVAAHTDNDRKAMKSARF 270
Query: 99 ---IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA AV V RG+S + YG+ P E A+NRR + +
Sbjct: 271 SSSWDLSAARATAVVKRLVERGMSPRGLSTVGYGEFSPVGPNDTEAGRARNRRVEILV 328
>gi|118588929|ref|ZP_01546336.1| hypothetical protein SIAM614_12793 [Stappia aggregata IAM 12614]
gi|118438258|gb|EAV44892.1| hypothetical protein SIAM614_12793 [Stappia aggregata IAM 12614]
Length = 533
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 5/141 (3%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+ +DT + + Q + + FD ++ ++RP ++ + L++
Sbjct: 383 AEDATIDTVSAQLAGLEGLEISQAGPAIMLRMRAQFDVAAATLRPEFQLLVEQVSQTLDQ 442
Query: 79 HDCDFLIEGHADELGSRNSS-----IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
D + L+ GH D RN+ L + RA AV + + R++V G + P
Sbjct: 443 VDGEILVVGHTDSDPIRNNPRFPTNWHLSVERAKAVAAVMESVLQTPGRVQVEGRGADEP 502
Query: 134 SVYGHDEDAYAKNRRAIVFLK 154
++ A NRR VFLK
Sbjct: 503 IAPNTSKEGKALNRRVEVFLK 523
>gi|269962340|ref|ZP_06176690.1| flagellar motor protein [Vibrio harveyi 1DA3]
gi|269832836|gb|EEZ86945.1| flagellar motor protein [Vibrio harveyi 1DA3]
Length = 314
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 44/128 (34%), Gaps = 5/128 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ +L +Q + + F S ++P ++ + ++ + GH D
Sbjct: 173 QGAIEVENLGQQIVIRMREKGAFPEGSAFLQPKFRPLVRQIAELVKDVPGIVRVSGHTDN 232
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S+ L +RA +V RG S R++V P + A N
Sbjct: 233 QPLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRLRVRGMADTEPLAPNDSDANRALN 292
Query: 147 RRAIVFLK 154
RR + +
Sbjct: 293 RRVEISIM 300
>gi|257469789|ref|ZP_05633881.1| putative autotransporter protein [Fusobacterium ulcerans ATCC 49185]
Length = 1198
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 44/122 (36%), Gaps = 2/122 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHAD 90
+ ++ F S+ +V+ + ++K+ IEGH D
Sbjct: 1073 ASSPKPVENPVIKYTMTGKNHFSFDESSLTEDGKKVIRKISEEIDKNSKRGILTIEGHTD 1132
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
+G+ + L +RA +V F + + + YGK P + AKNRR
Sbjct: 1133 SIGTTEYNQKLSEKRAESVEKEFKENLKTEIKYETKGYGKSRPVADNKIAEGRAKNRRVD 1192
Query: 151 VF 152
+
Sbjct: 1193 IK 1194
>gi|221200412|ref|ZP_03573454.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M]
gi|221206092|ref|ZP_03579106.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2]
gi|221174104|gb|EEE06537.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2]
gi|221179753|gb|EEE12158.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M]
Length = 159
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/151 (20%), Positives = 55/151 (36%), Gaps = 5/151 (3%)
Query: 9 ILSAITMMSISGID----NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPA 64
L + + S L + ++ F + FD Y+++P
Sbjct: 7 TLLGVLLSSGCHTAPPHRGLTETQVTTLKSAGFKETEQGFEFGAAGPILFDFDRYNLKPD 66
Query: 65 DIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
+++ +G L D + G+ D+ G+ + L RRA V V G+ A R+
Sbjct: 67 VRRIVERIGRTLHSAGIDGVRVYGYTDDEGTDAYDMELSRRRAEVVAIELVDVGLDARRI 126
Query: 124 KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ GK P A+NRRA + +
Sbjct: 127 AIVGRGKHDPVGDNRMPVGRAQNRRAAIVVS 157
>gi|206562090|ref|YP_002232853.1| putative outer membrane protein [Burkholderia cenocepacia J2315]
gi|198038130|emb|CAR54078.1| putative outer membrane protein [Burkholderia cenocepacia J2315]
Length = 239
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 35/110 (31%), Gaps = 1/110 (0%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGL 103
+ F S ++ P L I G D GS ++AL
Sbjct: 127 QVLLQGDANFAFDSAALTPDARAQLDRFVDINSGIEFRRVAITGFTDSTGSNTHNLALSA 186
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA V NY + G+ A G P + A+NRR + +
Sbjct: 187 SRARNVMNYLRSNGLKAQSFVSEGLGAADPVASNATAEGRAQNRRVEIRI 236
>gi|189353654|ref|YP_001949281.1| putative OmpA family transmembrane protein [Burkholderia
multivorans ATCC 17616]
gi|189337676|dbj|BAG46745.1| putative OmpA family transmembrane protein [Burkholderia
multivorans ATCC 17616]
Length = 171
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 55/151 (36%), Gaps = 5/151 (3%)
Query: 9 ILSAITMMSISGID----NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPA 64
L + + + L + ++ F + FD Y+++P
Sbjct: 19 TLLGVLLSAGCHTAPPHRGLTETQVTTLKSAGFKETEQGFEFGAAGPILFDFDRYNLKPD 78
Query: 65 DIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
+++ +G L D + G+ D+ G+ + L RRA V V G+ A R+
Sbjct: 79 VRRIVERIGRTLHSAGIDGVRVYGYTDDEGTDGYDLELSRRRAEVVAIELVDVGLDARRI 138
Query: 124 KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ GK P A+NRRA + +
Sbjct: 139 AIVGRGKHDPVGDNRMPVGRAQNRRAAIVVS 169
>gi|167838085|ref|ZP_02464944.1| ompA family protein [Burkholderia thailandensis MSMB43]
Length = 243
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++ F+T S ++ P +L + + + + I GH D G+R S+IAL RA
Sbjct: 136 NRTIEFETGSATLTPQGRAILDQMAAALAKMSNRTVEIIGHTDNSGNRTSNIALSQARAD 195
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
AV Y VA+GI++ ++ T G + P D A+NRR
Sbjct: 196 AVKGYLVAKGIASQQLTTTGVGPDQPIASNDSADGRARNRRIEF 239
>gi|170722426|ref|YP_001750114.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619]
gi|169760429|gb|ACA73745.1| OmpA/MotB domain protein [Pseudomonas putida W619]
Length = 576
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 44/123 (35%), Gaps = 2/123 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADE 91
+ + + + + F++ S ++P + L N + +I GH D
Sbjct: 427 PAMPQGVPDKPRTVRLDSLSLFNSGSAQLKPESTKFLVNAFAGIKAQPGWLIVITGHTDA 486
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS ++ L RA AV ++ G + V G P E + NRR
Sbjct: 487 TGSDEQNLRLSRARAAAVHDWIQHMGDIPNNCFAVQGLGASEPVASNDTEQGRSTNRRVE 546
Query: 151 VFL 153
+ L
Sbjct: 547 IRL 549
>gi|15893597|ref|NP_346946.1| chemotaxis motility protein B, gene motB [Clostridium
acetobutylicum ATCC 824]
gi|15023148|gb|AAK78286.1|AE007545_3 Chemotaxis motility protein B, gene motB [Clostridium
acetobutylicum ATCC 824]
gi|325507717|gb|ADZ19353.1| Chemotaxis motility protein B, gene motB [Clostridium
acetobutylicum EA 2018]
Length = 256
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 5/136 (3%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGH 88
+ ++ + ++ S+ D++ FDT ++P + L +G L+ D IEGH
Sbjct: 112 NGMQGSVSTNLQEKGLVVSIVDTLMFDTGRAEVKPDFQKKLVEIGEILKTIDNYIRIEGH 171
Query: 89 ADELGSRNSSIA----LGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAY 143
D NS A LG R+ V + F+ ++M SY P + E
Sbjct: 172 TDNTPISNSQYASNIELGSARSNNVEHLFIDVSKIPVTQMYTVSYADTRPVADNNSEAGK 231
Query: 144 AKNRRAIVFLKGCRAN 159
A+NRR + + + N
Sbjct: 232 ARNRRVDIVILNSKFN 247
>gi|291613031|ref|YP_003523188.1| OmpA/MotB domain protein [Sideroxydans lithotrophicus ES-1]
gi|291583143|gb|ADE10801.1| OmpA/MotB domain protein [Sideroxydans lithotrophicus ES-1]
Length = 259
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/144 (22%), Positives = 55/144 (38%), Gaps = 4/144 (2%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+M +++ N + +N S + S F I P ++ L++
Sbjct: 98 SMQNLAKDLNASMASFVKNGQMNVSQTGRGVELEINASALFKQGEADIEPEALKTLADAA 157
Query: 74 SWLEKHDCDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
L +D +EGH D L S+ L RA +V F+ +GI+A R+K
Sbjct: 158 KVLAGNDFAIEVEGHTDNLPISTPKFPSNWELSSARASSVVRLFIDQGITAKRLKAVGSA 217
Query: 130 KEMPSVYGHDEDAYAKNRRAIVFL 153
P + A+NRR + +
Sbjct: 218 DNQPVDSNDTPEGRARNRRVTITV 241
>gi|244538688|dbj|BAH82838.1| fibronectin-binding protein [Campylobacter lari]
Length = 328
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 1/107 (0%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGL 103
++ F SI P Q + +G LE++ + I EGH D GS+ + L L
Sbjct: 215 EKTIALEGHFGFDQISINPEFAQKIQEVGKVLEENPQYYTILEGHTDSTGSKTYNQKLSL 274
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
RA AV G++ ++ YG + P ++ A+NRR
Sbjct: 275 ERAKAVAKELEKSGVAKEKIATKGYGFDKPKASNDTKEGRAQNRRVE 321
>gi|227537401|ref|ZP_03967450.1| OmpA/MotB domain protein [Sphingobacterium spiritivorum ATCC 33300]
gi|227242779|gb|EEI92794.1| OmpA/MotB domain protein [Sphingobacterium spiritivorum ATCC 33300]
Length = 655
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 59/136 (43%), Gaps = 6/136 (4%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CD 82
K ++ L + E+ ++ + +++++D Y+IR +L+ L + L +
Sbjct: 517 SPQKDTTIQVTLRLQPIIEKGTTFILENIYYDLDKYNIRADAKPILNQLVNTLRDNPTLK 576
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD--- 139
+ H D + ++ L RA A +Y ++RGI+ R+ YG+ D
Sbjct: 577 IELSSHTDSRATHKYNMKLSQNRAQAAVDYIISRGIARDRIVAKGYGETRLVNKCADGVK 636
Query: 140 --EDAYAKNRRAIVFL 153
++ + NRR + +
Sbjct: 637 CSDEEHQANRRTEIKV 652
>gi|119477093|ref|ZP_01617329.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [marine gamma proteobacterium HTCC2143]
gi|119449456|gb|EAW30694.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [marine gamma proteobacterium HTCC2143]
Length = 363
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLR 104
V +V F + S ++ +SN+ +++K +IEGH D+ GS + L +
Sbjct: 248 EEVSLNVNFASDSSAVEGNYTSEISNVAEFMKKFAGATSVIEGHTDDTGSAIYNETLSQK 307
Query: 105 RAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RA AV N V R ISA R+ YG+ P + NRR + +K
Sbjct: 308 RANAVMNVLVNRFGISAERLSAKGYGEARPIQDNDSVEGRRANRRVVAVIK 358
>gi|148977050|ref|ZP_01813696.1| protein F-related protein [Vibrionales bacterium SWAT-3]
gi|145963710|gb|EDK28971.1| protein F-related protein [Vibrionales bacterium SWAT-3]
Length = 210
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 1/111 (0%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALG 102
+ V F T S PA Q L LGS+ ++ D D +IEGH D G+ + L
Sbjct: 96 VMVKLEQHVNFKTGSAFPEPAYNQWLDTLGSYLSQRQDIDIVIEGHTDNTGTDRINDPLS 155
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+RA V + +S+ + +G+ +P+ A NRR + L
Sbjct: 156 EQRAKEVKARLESNYVSSRSIYTRGFGEYVPACTNASPQGKACNRRVELML 206
>gi|71907808|ref|YP_285395.1| OmpA/MotB [Dechloromonas aromatica RCB]
gi|71847429|gb|AAZ46925.1| OmpA/MotB [Dechloromonas aromatica RCB]
Length = 261
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 54/138 (39%), Gaps = 2/138 (1%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVF-FDTSSYSIRPADIQVLS-NLGSWLE 77
T V Q ++ + V F+ + ++ PA +L + +
Sbjct: 123 ATSLNPTYTIDNGLVAAAGEAQNVLDKTLSNRVVEFEVGAATLTPAGRVILDEMYAAIKQ 182
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+ GH D GSR ++IAL L RA +V +Y + +G+ A + G + P
Sbjct: 183 IGTPKVQVIGHTDSSGSRQANIALSLSRANSVRSYLIEKGLPADGLTAVGSGPDQPVGSN 242
Query: 138 HDEDAYAKNRRAIVFLKG 155
+ AKNRR L G
Sbjct: 243 DSSEGRAKNRRIEFKLAG 260
>gi|288942206|ref|YP_003444446.1| OmpA/MotB domain-containing protein [Allochromatium vinosum DSM
180]
gi|288897578|gb|ADC63414.1| OmpA/MotB domain protein [Allochromatium vinosum DSM 180]
Length = 225
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 40/113 (35%), Gaps = 1/113 (0%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNSSIAL 101
Q + + F+ S I+P L + + + GH D G+ + L
Sbjct: 108 QLLVGMTGATAFEVDSDRIQPGFYSTLEKISAIVRKYGKTQLAVSGHTDSTGAAAYNQTL 167
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RRA +V Y G+ R+ YG P ED NRR + +
Sbjct: 168 SERRAASVGYYLERSGVLPQRIYSAGYGMNQPIASNATEDGRRLNRRVDILIM 220
>gi|182436312|ref|YP_001824031.1| putative secreted protein [Streptomyces griseus subsp. griseus NBRC
13350]
gi|178464828|dbj|BAG19348.1| putative secreted protein [Streptomyces griseus subsp. griseus NBRC
13350]
Length = 219
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 42/115 (36%), Gaps = 1/115 (0%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSI-RPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRN 96
++ V F S + A+ ++ + +++ + G D LGS
Sbjct: 97 EDSNADIKFALQAEVLFGKDSAKLGSAANARIAAIAAEIKKQNATKVRVFGFTDNLGSAA 156
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
L +RA AV + ++ YG++ P +E+ KNRR V
Sbjct: 157 HGDVLSKQRADAVHGVLSKELGATITYEIRGYGEQYPIASNSNEEGRKKNRRVEV 211
>gi|122879266|ref|YP_202154.6| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Xanthomonas oryzae pv. oryzae KACC10331]
Length = 270
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 2/134 (1%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVF-FDTSSYSIRPADIQVLS-NLGSWLEKHD 80
+T + +++ S Q ++G+ + F + S + P +++L + + D
Sbjct: 137 ASNTSYTVTNSLKLGGSEQGVLDQTLGNRIIEFQSGSSRLTPLGMRILDEMVEKMSQMKD 196
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
FLI GH D +G R S++AL RA AV +Y V +GI +RM V G + P
Sbjct: 197 ARFLIIGHTDNVGQRESNLALSQARAQAVKDYIVQKGIDGARMNVQGKGPDQPVADNASP 256
Query: 141 DAYAKNRRAIVFLK 154
D A+NRR ++
Sbjct: 257 DGRARNRRIQFKIQ 270
>gi|325286633|ref|YP_004262423.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
gi|324322087|gb|ADY29552.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
Length = 235
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/135 (30%), Positives = 65/135 (48%), Gaps = 3/135 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDS--VFFDTSSYSIRPADIQVLSNLGS-WLEK 78
D KI + + + ++ VFFDT+ Y+I A L L + ++E
Sbjct: 84 DKQAQKIEEEIPGAQVERVDDGIVVTFDENSGVFFDTAKYNINGASKTSLDKLANVFIEY 143
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
D + L+ GH D G+ + ++ L RA AV +Y A+GI+ASR +G+E P+
Sbjct: 144 PDTNILVVGHTDSSGAADYNMTLSKNRANAVTSYLTAKGIAASRFTTEWFGEEKPTHDNS 203
Query: 139 DEDAYAKNRRAIVFL 153
+ AKNRR V +
Sbjct: 204 TPEGRAKNRRVNVAI 218
>gi|261416894|ref|YP_003250577.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261373350|gb|ACX76095.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302326780|gb|ADL25981.1| OmpA family protein [Fibrobacter succinogenes subsp. succinogenes
S85]
Length = 774
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 51/138 (36%), Gaps = 10/138 (7%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+G+D + + +++ + + F + S ++ ++L + L
Sbjct: 623 VCAGLDRCPNEAGDDGFGCPKKKVEK------LEGISFKSGSATVNANAKRILKGIAQKL 676
Query: 77 E----KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
+ D +I+GH D G ++ L RRA AV G++ +R+K G
Sbjct: 677 KEDEAYKDLKIVIQGHTDNRGKAKKNLKLSDRRAKAVMKQLTKFGVAKNRIKAVGLGSTC 736
Query: 133 PSVYGHDEDAYAKNRRAI 150
P D NRR
Sbjct: 737 PVDDNSTADGREMNRRIE 754
>gi|256820715|ref|YP_003141994.1| membrane-bound proton-translocating pyrophosphatase [Capnocytophaga
ochracea DSM 7271]
gi|256582298|gb|ACU93433.1| V-type H(+)-translocating pyrophosphatase [Capnocytophaga ochracea
DSM 7271]
Length = 919
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 2/106 (1%)
Query: 50 DSVFFDTSSYSIRPADIQVL-SNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
D +F T S + Q L + + + G+ D GS + L RRA +
Sbjct: 811 DRTYFKTGSDELTEGSEQQLKNIVAILKAYPKAAIRLGGYTDNTGSVEGNKKLSERRANS 870
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVY-GHDEDAYAKNRRAIVFL 153
V N VA G + +++ YG E P + AKNRR + L
Sbjct: 871 VLNKLVALGANKAQLSAQGYGAEHPLCPANDTPECKAKNRRIDIRL 916
>gi|70728655|ref|YP_258404.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
gi|68342954|gb|AAY90560.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
Length = 229
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 3/109 (2%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH--DCDFLIEGHADELGSRNSSIALGLRR 105
V V F S + AD L+ + + L++ + GH D +GS + L +R
Sbjct: 119 VIRDVHFHFDSAKLTDADKTKLNTIVTRLKQEASSAQLRVTGHTDSVGSDAYNQKLSDKR 178
Query: 106 AYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
A++V Y ++ +S + VT G+ P + A NRR + +
Sbjct: 179 AHSVVEYLISNGIPRSSFVSVTGAGESKPVADNKTAEGRAMNRRTEIQI 227
>gi|120599624|ref|YP_964198.1| flagellar motor protein MotB [Shewanella sp. W3-18-1]
gi|146292382|ref|YP_001182806.1| flagellar motor protein MotB [Shewanella putrefaciens CN-32]
gi|120559717|gb|ABM25644.1| OmpA/MotB domain protein [Shewanella sp. W3-18-1]
gi|145564072|gb|ABP75007.1| OmpA/MotB domain protein [Shewanella putrefaciens CN-32]
gi|319425682|gb|ADV53756.1| stator-force generator of Na+ coupled flagellar motor, PomB
[Shewanella putrefaciens 200]
Length = 308
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 5/132 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
D + SL +Q + + F + S ++P V+ ++G L+ + G+ D+
Sbjct: 165 DGAIEIESLGQQIIIRIREKGSFASGSGFLQPRFKPVVRSVGELLKDVPGVITVAGYTDD 224
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ +S+ L +RA AV + V +G + RMKV P V + A+N
Sbjct: 225 MQISDELYSSNWDLSSKRAVAVAHELVQVKGFDSKRMKVVGMASNNPIVPNDSPENRARN 284
Query: 147 RRAIVFLKGCRA 158
RR + ++ +A
Sbjct: 285 RRVEIAIEQGKA 296
>gi|254227964|ref|ZP_04921394.1| outer membrane protein OmpA [Vibrio sp. Ex25]
gi|262396053|ref|YP_003287906.1| outer membrane protein A precursor [Vibrio sp. Ex25]
gi|151939460|gb|EDN58288.1| outer membrane protein OmpA [Vibrio sp. Ex25]
gi|262339647|gb|ACY53441.1| outer membrane protein A precursor [Vibrio sp. Ex25]
Length = 326
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+V FD S ++ + + I G++D GS + L +RA AV
Sbjct: 213 TVQFDLESAEVK-DASTLSGTVDLMNTYPQAQVEITGYSDTTGSAAYNQQLTEKRAKAVA 271
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
+ F A+GI+A RM V G+ P NRR V + T
Sbjct: 272 DEFQAKGIAAERMTVKGMGEANPVASNETRQGRQMNRRVEVVVPAFEYQT 321
>gi|284922551|emb|CBG35638.1| outer membrane lipoprotein [Escherichia coli 042]
Length = 160
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 55/149 (36%), Gaps = 3/149 (2%)
Query: 8 IILSAITMMSISGIDNL-DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADI 66
+I +++ + + + + +S + D++ F + Y + P
Sbjct: 9 LIFTSLVLTGCQSPQGKFTPEQVAAMQSYGFTESAGDWSLGLSDAILFAKNDYKLLPESQ 68
Query: 67 QVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMK 124
Q + + + L ++GH D G + + AL L+RA V + + G +
Sbjct: 69 QQIQTMAAKLASTGLTHARMDGHTDNYGEDSYNEALSLKRANVVADAWAMGGQIPRSNLT 128
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
GK+ P A+NRR V +
Sbjct: 129 TQGLGKKYPIASNKTAQGRAENRRVAVVI 157
>gi|261417146|ref|YP_003250829.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261373602|gb|ACX76347.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302326585|gb|ADL25786.1| OmpA family protein [Fibrobacter succinogenes subsp. succinogenes
S85]
Length = 232
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 41/103 (39%), Gaps = 1/103 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
V F S + P+ ++ L+ + +EGH GS + L RA +V
Sbjct: 122 VTFKAGSAELVPSSLKTLNAAIAGLKRNPKAKIEVEGHTSSDGSAELNQQLSEDRANSVR 181
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
NY + +GI A R+ YG P E NRR + +
Sbjct: 182 NYMIEQGIDADRVTAVGYGPSRPKGDNSTEAGRRANRRIELKV 224
>gi|46015011|pdb|1OAP|A Chain A, Mad Structure Of The Periplasmique Domain Of The
Escherichia Coli Pal Protein
Length = 109
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 46/105 (43%), Positives = 65/105 (61%), Gaps = 1/105 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAY 107
+ V+FD Y IR Q+L ++L + +EGHADE G+ +I+LG RRA
Sbjct: 4 NNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADERGTPEYNISLGERRAN 63
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
AV Y +G+SA ++ + SYGKE P+V GHDE AY+KNRRA++
Sbjct: 64 AVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYSKNRRAVLV 108
>gi|127511566|ref|YP_001092763.1| OmpA/MotB domain-containing protein [Shewanella loihica PV-4]
gi|126636861|gb|ABO22504.1| OmpA/MotB domain protein [Shewanella loihica PV-4]
Length = 481
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 2/119 (1%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRN 96
Q D + F S + P +V++ L ++L+ H F + GH D+ G +
Sbjct: 359 KDKIAQQGHVALDGLLFKFDSDQMLPEADEVITTLATYLKSHPKQHFYVVGHTDDQGKQG 418
Query: 97 SSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ L +RA AV + GI+ +++ G+ +P DE +NRR + L+
Sbjct: 419 YNKGLSEQRAKAVVATLTQSHGINKAQLSPMGVGEYVPVANNLDEAGRQRNRRVELVLR 477
>gi|300772840|ref|ZP_07082709.1| OmpA/MotB domain protein [Sphingobacterium spiritivorum ATCC 33861]
gi|300759011|gb|EFK55838.1| OmpA/MotB domain protein [Sphingobacterium spiritivorum ATCC 33861]
Length = 655
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 59/136 (43%), Gaps = 6/136 (4%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CD 82
K ++ L + E+ ++ + +++++D Y+IR +L+ L + L +
Sbjct: 517 SPQKDTTIQVTLRLQPIIEKGTTFILENIYYDLDKYNIRADAKPILNQLVNTLRDNPTLK 576
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD--- 139
+ H D + ++ L RA A +Y V+RGI+ R+ YG+ D
Sbjct: 577 IELSSHTDSRATHKYNMKLSQNRAQAAVDYIVSRGIARDRIVAKGYGETRLVNKCADGVK 636
Query: 140 --EDAYAKNRRAIVFL 153
++ + NRR + +
Sbjct: 637 CSDEEHQANRRTEIKV 652
>gi|238757108|ref|ZP_04618295.1| Type VI secretion system OmpA/MotB family protein [Yersinia aldovae
ATCC 35236]
gi|238704486|gb|EEP97016.1| Type VI secretion system OmpA/MotB family protein [Yersinia aldovae
ATCC 35236]
Length = 438
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 46/124 (37%), Gaps = 5/124 (4%)
Query: 34 VLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG 93
V + + GD++F S +RP + V+ + + + LI GH D +
Sbjct: 314 VSVDETTSRSKVIFKGDTMF-QVGSDKVRPEIMSVIERVAQEVHRVQGAVLIIGHTDSMP 372
Query: 94 SRNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
L +RA V + GI +++ G P D ++NRR
Sbjct: 373 INKPGFPNNQVLSEKRAANVARFMEKAGIPTDKIRFEGKGDAQPVSSNDDAAGRSQNRRV 432
Query: 150 IVFL 153
+F+
Sbjct: 433 EIFV 436
>gi|145589655|ref|YP_001156252.1| OmpA/MotB domain-containing protein [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
gi|145048061|gb|ABP34688.1| OmpA/MotB domain protein [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 163
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Query: 2 QYSTIF-IILSAITMMSISGIDNLDT----KISSPDTVLNESSLQEQFSSSVGDSVFFDT 56
++ + + + + M + S + DT ++ ++ + + S S++FD
Sbjct: 3 KFVKVLPLAILVLFMSACSSVKLDDTNGVASVNGGSSMTYDPISDPRSSVYNKRSIYFDF 62
Query: 57 SSYSIRPADIQVLSNLGSW---LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYF 113
SY+I P +S S+ +K +I+G+ D+ G+ ++ALG +R+ AV
Sbjct: 63 DSYTIDPKYASTVSAHASYLKSFQKQKASIIIQGNTDDRGTAEYNLALGQKRSEAVKKAL 122
Query: 114 VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ +G+S S+++ S+GKE P+ + A+ +NRRA
Sbjct: 123 LVQGVSESQLESVSFGKEKPANPAQTDAAFQENRRADFV 161
>gi|126444974|ref|YP_001061168.1| hypothetical protein BURPS668_A0162 [Burkholderia pseudomallei 668]
gi|126224465|gb|ABN87970.1| SciP protein [Burkholderia pseudomallei 668]
Length = 433
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 40/123 (32%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
L + F + + P VL + + + + GH+D
Sbjct: 309 LTVDEDDRRSVVVFRGDAMFRSGESRVLPEIEPVLDKVAREVARVGGRVTVTGHSDNQPI 368
Query: 95 RNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
R + I L +RA V V RG A R++ G P ++NRR
Sbjct: 369 RRADIPNNLVLSEKRAAYVAQILVQRGTPADRIRSEGRGDAQPVAENATPAGRSRNRRVE 428
Query: 151 VFL 153
+ +
Sbjct: 429 IAV 431
>gi|329890560|ref|ZP_08268903.1| ompA family protein [Brevundimonas diminuta ATCC 11568]
gi|328845861|gb|EGF95425.1| ompA family protein [Brevundimonas diminuta ATCC 11568]
Length = 191
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--LIEGHADELGSRNSSIALGLRRAY 107
DSV F + + P Q L+ L L + + I+GH D G+ + LG RA
Sbjct: 84 DSVKFPVNHTELSPEAEQRLAELVQRLRAENANVYLEIQGHTDSTGNDQINERLGQERAE 143
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV + +GI+ +RM SYG P + + A+NRR + +
Sbjct: 144 AVRRFLSDQGIALNRMATISYGASKPVAPNNTREGRAQNRRVAIMV 189
>gi|260597012|ref|YP_003209583.1| hypothetical protein CTU_12200 [Cronobacter turicensis z3032]
gi|260216189|emb|CBA29047.1| hypothetical protein CTU_12200 [Cronobacter turicensis z3032]
Length = 424
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
++ + F + + +RP + ++ + + + + D +I GH D
Sbjct: 300 VSVDESPRESRVIFHGDSMFSSGAAIVRPDRVDIIRRVAAEVRRVDGAVVIIGHTDSTPI 359
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
S+ AL +RA AV YF+A+GI+ ++ G P HDE ++NRR
Sbjct: 360 RSGAFASNQALSEKRAEAVAAYFLAQGIAPEKITPKGAGDTQPIASNHDEKGRSQNRRVE 419
Query: 151 VFL 153
+F+
Sbjct: 420 IFV 422
>gi|328542425|ref|YP_004302534.1| outer membrane lipoprotein [polymorphum gilvum SL003B-26A1]
gi|326412172|gb|ADZ69235.1| Probable outer membrane lipoprotein [Polymorphum gilvum
SL003B-26A1]
Length = 155
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 5/145 (3%)
Query: 15 MMSISGIDNLDTK----ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS 70
+ S +D L T ++ V +E+F +VG +FFD S + +
Sbjct: 2 LAGCSSVDTLTTPDVTNAAAAGFVDIRPGSEEEFMINVGRRIFFDRGSAELTETARMTID 61
Query: 71 NLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
+WL I+GHAD+ GS ++ AL +RA AV + VA G+ RM + YG
Sbjct: 62 KQAAWLRANPRWLVKIQGHADDPGSEAANKALSTKRAEAVRDALVALGVDGKRMWIKGYG 121
Query: 130 KEMPSVYGHDEDAYAKNRRAIVFLK 154
E P + + +NRR +V L+
Sbjct: 122 IERPVTDCDELTCHVQNRRVVVNLR 146
>gi|304312414|ref|YP_003812012.1| Predicted OmpA family protein [gamma proteobacterium HdN1]
gi|301798147|emb|CBL46369.1| Predicted OmpA family protein [gamma proteobacterium HdN1]
Length = 244
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 56/135 (41%), Gaps = 10/135 (7%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---- 82
+I+ D + + ++ + SV F +S ++P + +L + + L K+
Sbjct: 69 EIALADPLASGRITLDRGRIGISGSVLFALNSAELQPEGLALLREVSAPLRKYLEQRQEL 128
Query: 83 FLIEGHADE------LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
++ G D+ S + AL RA V + G+ ++ + ++G E P
Sbjct: 129 LMVSGFTDDLPIQKGNHSFTDNWALSAERALTVTRALIDNGLPSTLVFAAAFGAEQPIAS 188
Query: 137 GHDEDAYAKNRRAIV 151
D + AKNRR +
Sbjct: 189 NSDAEGRAKNRRVEI 203
>gi|183221220|ref|YP_001839216.1| hypothetical protein LEPBI_I1834 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189911311|ref|YP_001962866.1| endoflagellar motor protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167775987|gb|ABZ94288.1| Endoflagellar motor protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167779642|gb|ABZ97940.1| Putative outer membrane protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 354
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 53/124 (42%), Gaps = 5/124 (4%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGS---RNS 97
+ ++ D + FD+ S ++PA + + + L + + ++EGH D + +
Sbjct: 225 NKLIINIDDKISFDSGSSELKPAILPAIEKIRDILASYPENYIVVEGHTDNVPIKTKFRN 284
Query: 98 SIALGLRRAYAVFNY-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
+ L RA +V + + ++ YG+ P V ++ A NRR + +
Sbjct: 285 NWHLSSERALSVLEFILQNKNLNPKNFSSAGYGEHQPIVPNSTKENKALNRRVDIVVIPR 344
Query: 157 RANT 160
A++
Sbjct: 345 GASS 348
>gi|162454745|ref|YP_001617112.1| OmpA-domain-containing protein [Sorangium cellulosum 'So ce 56']
gi|161165327|emb|CAN96632.1| OmpA-domain outer membrane protein [Sorangium cellulosum 'So ce
56']
Length = 129
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/128 (30%), Positives = 54/128 (42%), Gaps = 3/128 (2%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD--CDFLIE 86
+ ++ E + +F+D IRP VL + + L H +E
Sbjct: 1 MAVQPAAPAEAVIEGDRIKIARPIFYDLDKDEIRPESFSVLDAVANILRTHPEITALTVE 60
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
GH D GS +I L RRA AV Y V RG+ A+ M YG P + +DE A N
Sbjct: 61 GHTDNQGSVEHNIKLSERRANAVVRYLVQRGV-ATPMTAPGYGAGAPLCFTNDEGCRAMN 119
Query: 147 RRAIVFLK 154
RR +K
Sbjct: 120 RRVEFRIK 127
>gi|53721140|ref|YP_110125.1| hypothetical protein BPSS0102 [Burkholderia pseudomallei K96243]
gi|167818184|ref|ZP_02449864.1| hypothetical protein Bpse9_23811 [Burkholderia pseudomallei 91]
gi|167896649|ref|ZP_02484051.1| hypothetical protein Bpse7_23090 [Burkholderia pseudomallei 7894]
gi|167921273|ref|ZP_02508364.1| hypothetical protein BpseBC_22178 [Burkholderia pseudomallei
BCC215]
gi|52211554|emb|CAH37548.1| OmpA family membrane protein [Burkholderia pseudomallei K96243]
Length = 433
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 40/123 (32%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
L + F + + P VL + + + + GH+D
Sbjct: 309 LTVDEDDRRSVVVFRGDAMFRSGESRVLPEIEPVLDKVAREVARVGGRVTVTGHSDNQPI 368
Query: 95 RNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
R + I L +RA V V RG A R++ G P ++NRR
Sbjct: 369 RRADIPNNLVLSEKRAAYVAQILVQRGTPADRIRSEGRGDAQPVAENATPAGRSRNRRVE 428
Query: 151 VFL 153
+ +
Sbjct: 429 IAV 431
>gi|23099679|ref|NP_693145.1| flagellar motor protein MotS [Oceanobacillus iheyensis HTE831]
gi|22777909|dbj|BAC14180.1| flagellar motor aparatus [Oceanobacillus iheyensis HTE831]
Length = 251
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 46/126 (36%), Gaps = 5/126 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
V+ + + + + + F++ I L+++G+ L + D +EGH D
Sbjct: 122 DVITANRNERGVVLVLQEKILFESGEAEILEEAGPFLNHIGTLLSELDNQVNVEGHTDSR 181
Query: 93 GSRNSSIALGLRRAYA-----VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
N + A V + A + SR Y +P +E +KNR
Sbjct: 182 PISNYRYPSNWELSGARASSVVRYFIEAESLHMSRFSTVGYADTVPLEPNSNEANMSKNR 241
Query: 148 RAIVFL 153
R + +
Sbjct: 242 RVEIII 247
>gi|118581755|ref|YP_903005.1| OmpA/MotB domain-containing protein [Pelobacter propionicus DSM
2379]
gi|118504465|gb|ABL00948.1| OmpA/MotB domain protein [Pelobacter propionicus DSM 2379]
Length = 266
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 59/140 (42%), Gaps = 10/140 (7%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
NL ++I+ V++E L+ + ++ ++ FD+ ++P +L L L+ +
Sbjct: 125 QNLKSEIAQGQVVISE--LKGALTVTMEAAILFDSGRVDVKPEGQLILFKLVETLKANRD 182
Query: 82 D-FLIEGHADELGS-------RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
+EGH D L S+ L RA V Y +G+ S + + G+ P
Sbjct: 183 RAIRVEGHTDNLAPSGALSRLFPSNWELSGARAVNVARYLQRQGVDPSLLSAVACGEYRP 242
Query: 134 SVYGHDEDAYAKNRRAIVFL 153
+ A+NRR + L
Sbjct: 243 VADNATREGRARNRRIEITL 262
>gi|76818070|ref|YP_336766.1| hypothetical protein BURPS1710b_A1609 [Burkholderia pseudomallei
1710b]
gi|126457603|ref|YP_001074182.1| hypothetical protein BURPS1106A_A0139 [Burkholderia pseudomallei
1106a]
gi|134280945|ref|ZP_01767655.1| SciP protein [Burkholderia pseudomallei 305]
gi|167826573|ref|ZP_02458044.1| hypothetical protein Bpseu9_23060 [Burkholderia pseudomallei 9]
gi|167848091|ref|ZP_02473599.1| hypothetical protein BpseB_22661 [Burkholderia pseudomallei B7210]
gi|167905011|ref|ZP_02492216.1| hypothetical protein BpseN_22374 [Burkholderia pseudomallei NCTC
13177]
gi|167913331|ref|ZP_02500422.1| hypothetical protein Bpse112_22785 [Burkholderia pseudomallei 112]
gi|226198766|ref|ZP_03794330.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9]
gi|242313911|ref|ZP_04812928.1| OmpA family protein [Burkholderia pseudomallei 1106b]
gi|254189633|ref|ZP_04896143.1| SciP protein [Burkholderia pseudomallei Pasteur 52237]
gi|254195529|ref|ZP_04901957.1| SciP protein [Burkholderia pseudomallei S13]
gi|76582543|gb|ABA52017.1| OmpA family membrane protein [Burkholderia pseudomallei 1710b]
gi|126231371|gb|ABN94784.1| OmpA family protein [Burkholderia pseudomallei 1106a]
gi|134247967|gb|EBA48051.1| SciP protein [Burkholderia pseudomallei 305]
gi|157937311|gb|EDO92981.1| SciP protein [Burkholderia pseudomallei Pasteur 52237]
gi|169652276|gb|EDS84969.1| SciP protein [Burkholderia pseudomallei S13]
gi|225929206|gb|EEH25229.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9]
gi|242137150|gb|EES23553.1| OmpA family protein [Burkholderia pseudomallei 1106b]
Length = 433
Score = 72.9 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 40/123 (32%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
L + F + + P VL + + + + GH+D
Sbjct: 309 LTVDEDDRRSVVVFRGDSMFRSGESRVLPEIEPVLDKVAREVARVGGRVTVTGHSDNQPI 368
Query: 95 RNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
R + I L +RA V V RG A R++ G P ++NRR
Sbjct: 369 RRADIPNNLVLSEKRAAYVAQILVQRGTPADRIRSEGRGDAQPVAENATPAGRSRNRRVE 428
Query: 151 VFL 153
+ +
Sbjct: 429 IAV 431
>gi|237509510|ref|ZP_04522225.1| OmpA family membrane protein [Burkholderia pseudomallei MSHR346]
gi|235001715|gb|EEP51139.1| OmpA family membrane protein [Burkholderia pseudomallei MSHR346]
Length = 558
Score = 72.9 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 45/123 (36%), Gaps = 2/123 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHAD 90
+ +S + + F + P Q + + LI GHAD
Sbjct: 421 DTVLDSPRAASIAMQLDTVSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHAD 480
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS ++ L RA A+ ++FV +G+ +R V G P A+NRR
Sbjct: 481 SSGSDAANFQLSEARARAIRDWFVDQGVLKTRFIVQGAGDTHPIADNDSPSGRAQNRRVE 540
Query: 151 VFL 153
V L
Sbjct: 541 VLL 543
>gi|229588852|ref|YP_002870971.1| hypothetical protein PFLU1321 [Pseudomonas fluorescens SBW25]
gi|229360718|emb|CAY47576.1| putative outer membrane protein [Pseudomonas fluorescens SBW25]
Length = 231
Score = 72.9 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 3/133 (2%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK--HDC 81
D +P V+ E + + + V V F S + AD L + + L++
Sbjct: 97 ADGCPPAPPPVVVEEVVVVKEETIVIRDVHFQFDSAQLTAADKTKLDTVATRLKQEAPSA 156
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDE 140
+ GH D +G + L +RA++V +Y + G+ S VT G+ P
Sbjct: 157 QLRVSGHTDSVGKDAYNQRLSEKRAHSVTDYLIGAGVPRSNFVSVTGAGESHPVADNKTA 216
Query: 141 DAYAKNRRAIVFL 153
+ A NRR + +
Sbjct: 217 EGRALNRRTEIQI 229
>gi|260061787|ref|YP_003194867.1| outer membrane protein-like peptidoglycan-associated (lipo)protein
[Robiginitalea biformata HTCC2501]
gi|88785919|gb|EAR17088.1| Outer membrane protein-like peptidoglycan-associated (lipo)protein
[Robiginitalea biformata HTCC2501]
Length = 453
Score = 72.9 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
+++ FD+ S +++P + V+ + + I GH D G ++++AL RA A
Sbjct: 347 NAILFDSGSANLQPRSMGVIRQISQVLQQDGGMSLQIVGHTDSDGDADANVALSQARAEA 406
Query: 109 VFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
V V G+ A R+ G+ P + A+NRR
Sbjct: 407 VKKALVDVYGVDAGRLSTLGKGESEPVSDNNSPAGKAQNRRVEFI 451
>gi|114320554|ref|YP_742237.1| OmpA/MotB domain-containing protein [Alkalilimnicola ehrlichii
MLHE-1]
gi|114226948|gb|ABI56747.1| OmpA/MotB domain protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 266
Score = 72.9 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 42/143 (29%), Gaps = 5/143 (3%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
I+ + + +L L E + F + S + + + +L + L
Sbjct: 93 ITAELQEQLEGELGEGLLEVERLDENVLIRFPEKAAFPSGSADVNASFLPILHTVAGVLA 152
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYA-----VFNYFVARGISASRMKVTSYGKEM 132
+ GH D++ + A V A I R +
Sbjct: 153 GQGGTIRVSGHTDDVPIDTERFRSNWELSTARATEVVHLLLEAAPIEPGRFIAQGHADTR 212
Query: 133 PSVYGHDEDAYAKNRRAIVFLKG 155
P + A+NRR V + G
Sbjct: 213 PLRPNTSPENRARNRRVDVLITG 235
>gi|302037886|ref|YP_003798208.1| putative OmpA/MotB family outer membrane protein [Candidatus
Nitrospira defluvii]
gi|300605950|emb|CBK42283.1| putative Outer membrane protein, ompA family [Candidatus Nitrospira
defluvii]
Length = 301
Score = 72.9 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/150 (22%), Positives = 54/150 (36%), Gaps = 6/150 (4%)
Query: 13 ITMMSISGIDNLDTKIS---SPDTVLNESSLQEQFSSSV-GDSVFFDTSSYSIRPADIQV 68
+T+ S + + SP + + +Q + G+ + F+++S + V
Sbjct: 153 VTVASAGSTSPANLSPAGQPSPAPHASRAQVQAGLDEILRGEHIAFESNSAVLTSKGRAV 212
Query: 69 LSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
+ L + I GH D G ++ L RA AV Y V +R+
Sbjct: 213 VDKLVPALKRAPEAIIEIGGHTDSYGDPEYNLQLSRTRAEAVRQYLVE-HQVPNRLTAVG 271
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
YG P A KNRR +K R
Sbjct: 272 YGSTRPLSQDRTRAASKKNRRIEFRVKEER 301
>gi|157889001|dbj|BAF80950.1| fibronectin-binding protein [Campylobacter lari]
Length = 328
Score = 72.9 bits (177), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 1/107 (0%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGL 103
++ F SI P Q + +G LE++ + I EGH D GS+ + L L
Sbjct: 215 EKTIALEGHFGFDQISINPEFAQKIQEVGKVLEENPQYYTILEGHTDSTGSKVYNQKLSL 274
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
RA AV G++ ++ YG + P ++ A+NRR
Sbjct: 275 ERAKAVAKELEKSGVAKEKIATKGYGFDKPKASNDTKEGRAQNRRVE 321
>gi|193213735|ref|YP_001994934.1| OmpA/MotB domain-containing protein [Chloroherpeton thalassium ATCC
35110]
gi|193087212|gb|ACF12487.1| OmpA/MotB domain protein [Chloroherpeton thalassium ATCC 35110]
Length = 264
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 42/103 (40%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+ F + + + +L L L I GH D GS + L ++RA AV
Sbjct: 157 DIAFPVNRTELPYSAHDMLDELAEKLLAKRLSVEIVGHTDSKGSSRFNYNLSVQRAAAVK 216
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
Y + RG+ AS ++ G P ++ KNRR V +
Sbjct: 217 KYLIRRGVPASWLRAYGVGSNEPITRNKTKEGREKNRRIEVKV 259
>gi|167722035|ref|ZP_02405271.1| hypothetical protein BpseD_23689 [Burkholderia pseudomallei DM98]
Length = 433
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 40/123 (32%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
L + F + + P VL + + + + GH+D
Sbjct: 309 LTVDEDDRRSVVVFRGDSMFRSGESRVLPEIEPVLDKVAREVARVGGRVTVTGHSDNQPI 368
Query: 95 RNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
R + I L +RA V V RG A R++ G P ++NRR
Sbjct: 369 RRADIPNNLVLSEKRAAYVAQILVQRGTPADRIRSEGRGDAQPVAENATPAGRSRNRRVE 428
Query: 151 VFL 153
+ +
Sbjct: 429 IAV 431
>gi|46447485|ref|YP_008850.1| peptidoglycan-associated lipoprotein precursor (pal) [Candidatus
Protochlamydia amoebophila UWE25]
gi|46401126|emb|CAF24575.1| probable peptidoglycan-associated lipoprotein precursor (pal)
[Candidatus Protochlamydia amoebophila UWE25]
Length = 246
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
Query: 51 SVFFDTSSYSIRPADI-QVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYA 108
+++FD S I+ Q + + ++ +H IEGH DE G + ++ALG RR+ A
Sbjct: 139 TIYFDYDSSMIKGQANLQTIHQIADFMRRHPNVYIFIEGHTDERGPQAYNLALGSRRSNA 198
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V N ++ ++ + SYGKE P V E+ +++NRR +
Sbjct: 199 VRNLLISEDVNPDNLFTISYGKERPVVLEKHEEGWSRNRRVEFKI 243
>gi|315223848|ref|ZP_07865696.1| inorganic diphosphatase [Capnocytophaga ochracea F0287]
gi|314946178|gb|EFS98179.1| inorganic diphosphatase [Capnocytophaga ochracea F0287]
Length = 919
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 2/106 (1%)
Query: 50 DSVFFDTSSYSIRPADIQVL-SNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
D +F T S + Q L + + + G+ D GS + L RRA +
Sbjct: 811 DRTYFKTGSDELTEGSEQQLKNIVAILKAYPKAAIRLGGYTDNTGSVEGNKKLSERRANS 870
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVY-GHDEDAYAKNRRAIVFL 153
V N VA G + +++ YG E P + AKNRR + L
Sbjct: 871 VLNKLVALGANKAQLSAQGYGAEHPLCPANDTPECKAKNRRIDIRL 916
>gi|332534966|ref|ZP_08410784.1| flagellar motor rotation protein MotB [Pseudoalteromonas
haloplanktis ANT/505]
gi|332035584|gb|EGI72076.1| flagellar motor rotation protein MotB [Pseudoalteromonas
haloplanktis ANT/505]
Length = 306
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 54/132 (40%), Gaps = 5/132 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
D + SL +Q + ++ F + S ++P ++ ++G L+ + + GH D+
Sbjct: 166 DGAIELESLGQQIIIRIRENGSFPSGSAFLQPKFKPIIQDIGVLLKDVPGEITVSGHTDD 225
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
++ L +RA AV + +G +RM V P V + +N
Sbjct: 226 FQVSNELYINNWDLSSKRAVAVASELQTVQGFDKNRMMVVGRADTRPLVPNDSNEDRRRN 285
Query: 147 RRAIVFLKGCRA 158
RR + + +A
Sbjct: 286 RRVEISILQGKA 297
>gi|296271644|ref|YP_003654275.1| OmpA/MotB domain-containing protein [Arcobacter nitrofigilis DSM
7299]
gi|296095819|gb|ADG91769.1| OmpA/MotB domain protein [Arcobacter nitrofigilis DSM 7299]
Length = 271
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 47/119 (39%), Gaps = 1/119 (0%)
Query: 36 NESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGS 94
N+ + E + D +FF I +V+ + L+ + I GH D G
Sbjct: 150 NKKTQDEINAVISKDHIFFKRLGTDITDESYKVVEQIAKILKNNPSVKIEIGGHTDAKGE 209
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ + + L+RA +V GI+ R+ YG+ P V ++NRR +
Sbjct: 210 ADVNQWISLQRAKSVKKELEKLGIAEDRITAVGYGESQPLVPNDKNGYSSENRRVEFKI 268
>gi|161520469|ref|YP_001583896.1| hypothetical protein Bmul_3921 [Burkholderia multivorans ATCC
17616]
gi|160344519|gb|ABX17604.1| type VI secretion system OmpA/MotB family protein [Burkholderia
multivorans ATCC 17616]
Length = 431
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 51/128 (39%), Gaps = 5/128 (3%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHA 89
+ TV + + + GD++F S++ + +++ + + + K I G+
Sbjct: 303 AAGTVSVDEDARRSVVTFRGDAMFRP-GGASVQASMNPLIAKIAAEIAKVPGKVTIVGYT 361
Query: 90 DELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
D + S+ AL RA V A G+ A+R++ G P A+
Sbjct: 362 DNVPIRSGQFASNQALSEERATQVMQMLQAAGVPANRLEAVGKGDADPVGDNRTAQGRAQ 421
Query: 146 NRRAIVFL 153
NRR + +
Sbjct: 422 NRRVEIDV 429
>gi|145579534|pdb|2HQS|H Chain H, Crystal Structure Of TolbPAL COMPLEX
gi|145579536|pdb|2HQS|C Chain C, Crystal Structure Of TolbPAL COMPLEX
gi|145579538|pdb|2HQS|E Chain E, Crystal Structure Of TolbPAL COMPLEX
gi|145579540|pdb|2HQS|G Chain G, Crystal Structure Of TolbPAL COMPLEX
gi|223673846|pdb|2W8B|C Chain C, Crystal Structure Of Processed Tolb In Complex With Pal
gi|223673847|pdb|2W8B|E Chain E, Crystal Structure Of Processed Tolb In Complex With Pal
gi|223673848|pdb|2W8B|G Chain G, Crystal Structure Of Processed Tolb In Complex With Pal
gi|223673849|pdb|2W8B|H Chain H, Crystal Structure Of Processed Tolb In Complex With Pal
Length = 118
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 46/105 (43%), Positives = 65/105 (61%), Gaps = 1/105 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAY 107
+ V+FD Y IR Q+L ++L + +EGHADE G+ +I+LG RRA
Sbjct: 5 NNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYKVTVEGHADERGTPEYNISLGERRAN 64
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
AV Y +G+SA ++ + SYGKE P+V GHDE AY+KNRRA++
Sbjct: 65 AVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYSKNRRAVLV 109
>gi|114763456|ref|ZP_01442863.1| OmpA domain protein [Pelagibaca bermudensis HTCC2601]
gi|114543994|gb|EAU47005.1| OmpA domain protein [Roseovarius sp. HTCC2601]
Length = 637
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 46/125 (36%), Gaps = 1/125 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGH 88
+ E + + F+ S ++ + V+ ++ L+ D I+GH
Sbjct: 477 TLGIPTPEECEAQIVEIIGDRKINFEPGSANLDASAKDVMDDIAELLKLCGDIPLEIQGH 536
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D G + + L RA AV + R + + +V YG+ P E+ NRR
Sbjct: 537 TDSQGRESMNEQLSQDRAQAVLDALRNRRVLTASYRVKGYGEMQPIADNGTEEGREANRR 596
Query: 149 AIVFL 153
L
Sbjct: 597 IAFRL 601
>gi|326795240|ref|YP_004313060.1| peptidoglycan-associated lipoprotein [Marinomonas mediterranea
MMB-1]
gi|326546004|gb|ADZ91224.1| peptidoglycan-associated lipoprotein [Marinomonas mediterranea
MMB-1]
Length = 200
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/138 (27%), Positives = 68/138 (49%), Gaps = 1/138 (0%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
++ + + + + V +FD +RP + L+
Sbjct: 60 SFGAGEDGSITSVVVDDSGSASAVDQDVDLLAGVETVFYFDFDKSIVRPEAREALAKHAE 119
Query: 75 W-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
+ + D ++EGHADE G+R ++ALG RRA AV Y +G++AS+++ S+G+E+P
Sbjct: 120 FLVANPDARVVLEGHADERGTREYNMALGERRAKAVARYLTIQGVAASQIESVSFGEEVP 179
Query: 134 SVYGHDEDAYAKNRRAIV 151
+GHD+ ++ NRR V
Sbjct: 180 VAFGHDDASWQLNRRVEV 197
>gi|119775566|ref|YP_928306.1| flagellar motor protein MotB [Shewanella amazonensis SB2B]
gi|119768066|gb|ABM00637.1| sodium-driven polar flagellar protein PomB [Shewanella amazonensis
SB2B]
Length = 312
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 5/129 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
D + SL +Q + + F + S ++P V+ +G L+ + G+ D
Sbjct: 166 VDGAIEIESLGQQIIIRIREKGAFGSGSGFLQPRFRPVIRAVGELLKDVPGIITVSGYTD 225
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
++ +S+ L +RA +V + V +G +SRMKV G P V + A+
Sbjct: 226 DMQISNELYSSNWDLSSKRAVSVAHELVKVKGFDSSRMKVVGMGSNNPLVPNESAENRAR 285
Query: 146 NRRAIVFLK 154
NRR + ++
Sbjct: 286 NRRVEIAIE 294
>gi|187778759|ref|ZP_02995232.1| hypothetical protein CLOSPO_02354 [Clostridium sporogenes ATCC
15579]
gi|187772384|gb|EDU36186.1| hypothetical protein CLOSPO_02354 [Clostridium sporogenes ATCC
15579]
Length = 251
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 49/126 (38%), Gaps = 5/126 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ + + D+V F+ I+P Q++ + + + ++EGH D +
Sbjct: 116 SSVEVKEDGRGVIIQLRDNVLFEIGRADIKPQSKQIMDKINGLIATLPNEVIVEGHTDNV 175
Query: 93 GS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
S+ L RA V YFV + + R YG+ P + + AKNR
Sbjct: 176 PIKNEVYGSNWELSTARAVNVLRYFVETKKQNPVRFTAAGYGEYRPIAQNNSDVNKAKNR 235
Query: 148 RAIVFL 153
R + +
Sbjct: 236 RVNIVI 241
>gi|254189637|ref|ZP_04896147.1| OmpA family protein [Burkholderia pseudomallei Pasteur 52237]
gi|157937315|gb|EDO92985.1| OmpA family protein [Burkholderia pseudomallei Pasteur 52237]
Length = 558
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 45/123 (36%), Gaps = 2/123 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHAD 90
+ +S + + F + P Q + + LI GHAD
Sbjct: 421 DTVLDSPRAASIAMQLDTVSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHAD 480
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS ++ L RA A+ ++FV +G+ +R V G P A+NRR
Sbjct: 481 SSGSDAANFQLSEARARAIRDWFVDQGVLKTRFIVQGAGDTHPIADNDSPSGRAQNRRVE 540
Query: 151 VFL 153
V L
Sbjct: 541 VLL 543
>gi|126444048|ref|YP_001061161.1| OmpA family protein [Burkholderia pseudomallei 668]
gi|126223539|gb|ABN87044.1| OmpA family protein [Burkholderia pseudomallei 668]
Length = 558
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 45/123 (36%), Gaps = 2/123 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHAD 90
+ +S + + F + P Q + + LI GHAD
Sbjct: 421 DTVLDSPRAASIAMQLDTVSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHAD 480
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS ++ L RA A+ ++FV +G+ +R V G P A+NRR
Sbjct: 481 SSGSDAANFQLSEARARAIRDWFVDQGVLKTRFIVQGAGDTHPIADNDSPSGRAQNRRVE 540
Query: 151 VFL 153
V L
Sbjct: 541 VLL 543
>gi|116688507|ref|YP_834130.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
HI2424]
gi|116646596|gb|ABK07237.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424]
Length = 316
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/106 (28%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++ F+T S ++ P +L + + + + I GH D G+R S+IAL RA
Sbjct: 209 NRTIEFETGSATLTPQGKLILDQMAAALAKMQNRTVDIIGHTDNSGNRTSNIALSQARAD 268
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV Y + + I +M T G + P D A+NRR +
Sbjct: 269 AVKGYLITKSIPPQQMTTTGVGPDQPIAPNDMADGRARNRRIEFRV 314
>gi|332286730|ref|YP_004418641.1| OmpA/MotB [Pusillimonas sp. T7-7]
gi|330430683|gb|AEC22017.1| OmpA/MotB [Pusillimonas sp. T7-7]
Length = 220
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
++++ +S V ++ +V FDT Y+++PA + VL ++ ++ +
Sbjct: 83 NDVEKSGASSLGVDVTEMPDGTLRVNIPSNVSFDTGKYALKPALLPVLDSVARALVQHPE 142
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
G+ D GS + L + RA AV NY +G+ + G P
Sbjct: 143 LRAKSIGYTDSTGSAQVNQTLSVNRARAVANYLSDKGVPVGNLTAEGRGPSNPVGDNATA 202
Query: 141 DAYAKNRRAIVFL 153
+ A NRR ++L
Sbjct: 203 EGRAMNRRVELYL 215
>gi|255038084|ref|YP_003088705.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
18053]
gi|254950840|gb|ACT95540.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
Length = 648
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 53/132 (40%), Gaps = 2/132 (1%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CD 82
+ V + E + V +++++D Y+IRP L L L+ +
Sbjct: 514 TKELTDTTFNVTIKLDKLELNKTFVLENIYYDLDKYNIRPDAAIELDKLVQILKDNPTMT 573
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH-DED 141
+ H D + ++ L RA + Y ++GI A RM+ YG+ + E+
Sbjct: 574 IELSSHTDARATDAYNMTLSQNRAESAVAYLNSKGIEADRMEAKGYGERELIIPNAKTEE 633
Query: 142 AYAKNRRAIVFL 153
+ +NRR +
Sbjct: 634 EHQRNRRTEFTI 645
>gi|76819194|ref|YP_336761.1| OmpA family protein [Burkholderia pseudomallei 1710b]
gi|76583667|gb|ABA53141.1| OmpA family membrane protein [Burkholderia pseudomallei 1710b]
Length = 558
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 45/123 (36%), Gaps = 2/123 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHAD 90
+ +S + + F + P Q + + LI GHAD
Sbjct: 421 DTVLDSPRAASIAMQLDTVSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHAD 480
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS ++ L RA A+ ++FV +G+ +R V G P A+NRR
Sbjct: 481 SSGSDAANFQLSEARARAIRDWFVDQGVLKTRFIVQGAGDTHPIADNDSPSGRAQNRRVE 540
Query: 151 VFL 153
V L
Sbjct: 541 VLL 543
>gi|119357899|ref|YP_912543.1| OmpA/MotB domain-containing protein [Chlorobium phaeobacteroides
DSM 266]
gi|119355248|gb|ABL66119.1| OmpA/MotB domain protein [Chlorobium phaeobacteroides DSM 266]
Length = 417
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 1/102 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYA 108
D + FDT ++ + L+N+G L+ + + I G+ D +G ++ L RA
Sbjct: 310 DRLVFDTGKSTLMATSQEQLNNIGEILKAYPAVELKIGGYTDNVGDPQANKKLSQARAET 369
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
V V GI R+ YG E P E+ +NRR
Sbjct: 370 VMAELVKLGIDNIRLAAEGYGIEHPVADNATEEGRQQNRRVD 411
>gi|321312511|ref|YP_004204798.1| flagellar motor protein MotS [Bacillus subtilis BSn5]
gi|320018785|gb|ADV93771.1| flagellar motor protein MotS [Bacillus subtilis BSn5]
Length = 242
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 44/133 (33%), Gaps = 5/133 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ + + ++V FDT + +L + L+ D +EGH D
Sbjct: 109 AQMTAKRDERGVVLVLQEAVLFDTGEAKVLKNAETLLHQIAVLLQTIPNDIQVEGHTDSR 168
Query: 93 GS----RNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNR 147
S+ L RA V YF ++ R Y P + +NR
Sbjct: 169 NISTYRYPSNWELSAARASGVIQYFTSKEKLPSKRFIAVGYADTKPVKDNKTNEHMKENR 228
Query: 148 RAIVFLKGCRANT 160
R + +K + +
Sbjct: 229 RVEIVIKKSKTTS 241
>gi|39937842|ref|NP_950118.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
CGA009]
gi|192293627|ref|YP_001994232.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1]
gi|39651702|emb|CAE30224.1| OmpA/MotB domain [Rhodopseudomonas palustris CGA009]
gi|192287376|gb|ACF03757.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1]
Length = 464
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 51/126 (40%), Gaps = 1/126 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGH 88
+ V Q ++ F+++S SI +L L + + + GH
Sbjct: 339 AAAPVDASVCQQLFNGLLAKATIQFESASASIDKDSAALLDRLIETAMRCPNAKIEVAGH 398
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D G + +L +RA V +Y V G+S R++ YG ++P + AKNRR
Sbjct: 399 TDSDGDPAFNQSLSEKRAREVVDYMVRAGLSPERLQAFGYGSKIPVAGNDTDAGKAKNRR 458
Query: 149 AIVFLK 154
++
Sbjct: 459 IDFVVR 464
>gi|259417580|ref|ZP_05741499.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
gi|259346486|gb|EEW58300.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
Length = 166
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/136 (33%), Positives = 65/136 (47%), Gaps = 1/136 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKH 79
+ + + S F ++GD V F SI P +L W
Sbjct: 27 TNAGNGGTGIGGGSTADPSSPAYFREAIGDRVLFLVDQSSISPEAQGILDGQARWLTANP 86
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
IEGHADE G+R ++ALG RRA + Y +++G++ASR++ SYGKE P +
Sbjct: 87 AYVVTIEGHADERGTREYNLALGARRANSAREYLISQGVAASRIQTVSYGKERPIEICSE 146
Query: 140 EDAYAKNRRAIVFLKG 155
+ Y KNRRA+ L G
Sbjct: 147 QSCYNKNRRAVTVLAG 162
>gi|322418016|ref|YP_004197239.1| OmpA/MotB domain-containing protein [Geobacter sp. M18]
gi|320124403|gb|ADW11963.1| OmpA/MotB domain protein [Geobacter sp. M18]
Length = 459
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FD IR + ++ + +++K+ +IEGH D +G+ ++ L RRA AV +Y
Sbjct: 228 FDIDRAVIRQENKDEIAVVCDFMKKYPTTTAVIEGHTDNVGAPEYNLDLSKRRAQAVVDY 287
Query: 113 FVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V I SR++ +G P ++ NRR +
Sbjct: 288 LVTDCGIDRSRLEARGFGMARPVAPNTTDEGRQANRRIEAII 329
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 42/104 (40%), Gaps = 2/104 (1%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVF 110
V FDT I P ++ + +++++ +IEGH D +G ++ L RA +
Sbjct: 350 VEFDTGKADIGPQYKGEMAKVADYMKQYPTTTAVIEGHTDNVGGYEYNMKLSRERAESAV 409
Query: 111 NYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
Y V R+ YG Y + AKNRR +
Sbjct: 410 RYLVDNFGIEKSRLSAKGYGYTRRVAYNRTAEGRAKNRRINAII 453
>gi|218676173|ref|YP_002394992.1| outer membrane protein OmpA [Vibrio splendidus LGP32]
gi|218324441|emb|CAV25864.1| outer membrane protein OmpA [Vibrio splendidus LGP32]
Length = 353
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 1/102 (0%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
F+T+S + L L L+ H + GH D G+ ++ + +RA AV
Sbjct: 232 MFETNSTELSSEGKTALIPLVEVLQAHPQSSVNVVGHTDSTGAAEYNMMISKKRAAAVAA 291
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
Y +GI+A R+ + G+E P + A+NRR +
Sbjct: 292 YIEEQGIAADRIAASGEGEENPVASNATAEGRAQNRRVDATI 333
>gi|217423043|ref|ZP_03454545.1| OmpA family protein [Burkholderia pseudomallei 576]
gi|254182960|ref|ZP_04889553.1| OmpA family protein [Burkholderia pseudomallei 1655]
gi|254264206|ref|ZP_04955071.1| SciP protein [Burkholderia pseudomallei 1710a]
gi|254299754|ref|ZP_04967203.1| SciP protein [Burkholderia pseudomallei 406e]
gi|157809358|gb|EDO86528.1| SciP protein [Burkholderia pseudomallei 406e]
gi|184213494|gb|EDU10537.1| OmpA family protein [Burkholderia pseudomallei 1655]
gi|217393951|gb|EEC33971.1| OmpA family protein [Burkholderia pseudomallei 576]
gi|254215208|gb|EET04593.1| SciP protein [Burkholderia pseudomallei 1710a]
Length = 439
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 40/123 (32%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
L + F + + P VL + + + + GH+D
Sbjct: 315 LTVDEDDRRSVVVFRGDSMFRSGESRVLPEIEPVLDKVAREVARVGGRVTVTGHSDNQPI 374
Query: 95 RNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
R + I L +RA V V RG A R++ G P ++NRR
Sbjct: 375 RRADIPNNLVLSEKRAAYVAQILVQRGTPADRIRSEGRGDAQPVAENATPAGRSRNRRVE 434
Query: 151 VFL 153
+ +
Sbjct: 435 IAV 437
>gi|90409178|ref|ZP_01217293.1| outer membrane protein OmpA [Psychromonas sp. CNPT3]
gi|90309723|gb|EAS37893.1| outer membrane protein OmpA [Psychromonas sp. CNPT3]
Length = 326
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 55/137 (40%), Gaps = 3/137 (2%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LE 77
S D + S +++Q +FFD S I P +L + +
Sbjct: 189 SSSKQKDIIPITQPKETVVSEIKKQPKLPKNIILFFDFDSSEILP--TPLLHQITDQLAK 246
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+ I H D GS + L +RA V YF+ + I+ +R+ V S+G+ +P+
Sbjct: 247 FPKINISIIAHTDSEGSDLYNDKLAAKRALEVSKYFLHKNINKNRINVLSHGERLPTHDN 306
Query: 138 HDEDAYAKNRRAIVFLK 154
+ AKNRR +
Sbjct: 307 ETKKGRAKNRRVEITFS 323
>gi|83590576|ref|YP_430585.1| OmpA/MotB [Moorella thermoacetica ATCC 39073]
gi|83573490|gb|ABC20042.1| OmpA/MotB [Moorella thermoacetica ATCC 39073]
Length = 244
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 51/132 (38%), Gaps = 5/132 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ ++ + S SV FD ++RPA + +L + +L + +
Sbjct: 102 AEQGLKDQVFVTATDQGLIISFTGSVLFDRGQATLRPASVPILQKIAGYLGQVPNYIGVA 161
Query: 87 GHAD----ELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDED 141
G D ++ L + RA V YF G+S SR YG+ P + E+
Sbjct: 162 GSTDDLPINTSQFPTNWELSVIRATTVIRYFTETAGLSPSRFVALGYGQYHPLFPNNSEE 221
Query: 142 AYAKNRRAIVFL 153
KNRR + +
Sbjct: 222 DRRKNRRVDIII 233
>gi|322835249|ref|YP_004215275.1| OmpA/MotB domain protein [Rahnella sp. Y9602]
gi|321170450|gb|ADW76148.1| OmpA/MotB domain protein [Rahnella sp. Y9602]
Length = 558
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
Query: 53 FFDTSSYSIRPADIQVL-SNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FDT Y ++P +++L + L K ++ GH D G ++ L L+RA ++ +
Sbjct: 438 LFDTGKYELKPGSLKMLVNTLVDIKAKPGWLIVVAGHTDITGDAKANQTLSLKRAGSLRD 497
Query: 112 Y-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +S + V YG P + A NRR + L
Sbjct: 498 WMLSTSDVSPTCFAVQGYGATRPVATNDTPEGRAANRRVEISL 540
>gi|254419256|ref|ZP_05032980.1| Rickettsia 17 kDa surface antigen family [Brevundimonas sp. BAL3]
gi|196185433|gb|EDX80409.1| Rickettsia 17 kDa surface antigen family [Brevundimonas sp. BAL3]
Length = 224
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 49/124 (39%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+ + + + + V F T+ SI P + VL ++ E + GH D
Sbjct: 97 GSGVGVARQGDNLVLRMPSDVTFATNQSSIDPRFLPVLDDVARVLQEYDRSTIDVIGHTD 156
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + L RRA +V + V RG+ A R+ V P + A+NRR
Sbjct: 157 STGGDAINQPLSERRAASVASELVRRGVIAERLYVAGNSSRNPVASNATPEGKAQNRRVE 216
Query: 151 VFLK 154
+ ++
Sbjct: 217 ILIR 220
>gi|157415702|ref|YP_001482958.1| fibronectin-binding protein [Campylobacter jejuni subsp. jejuni
81116]
gi|157386666|gb|ABV52981.1| outer membrane fibronectin-binding protein [Campylobacter jejuni
subsp. jejuni 81116]
gi|307748343|gb|ADN91613.1| Outer membrane fibronectin-binding protein [Campylobacter jejuni
subsp. jejuni M1]
gi|315930990|gb|EFV09965.1| oprF membrane domain protein [Campylobacter jejuni subsp. jejuni
327]
Length = 319
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 53/144 (36%), Gaps = 3/144 (2%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+ ++ + + ++ F +I P + + +
Sbjct: 176 AVEEVADTRPAPQTKCPVEPREGALLDENGCEKTISLEGHFGFDKTTINPTFQEKIKEIA 235
Query: 74 SW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
E D ++EGH D +GSR + L RRA +V N G+ SR+K YG++
Sbjct: 236 KVLDENERYDTILEGHTDNIGSRAYNQKLSERRAKSVANELEKYGVEKSRIKTVGYGQDN 295
Query: 133 PSVYGHDEDAYAKNRRAI--VFLK 154
P ++ A NRR L+
Sbjct: 296 PRSSNDTKEGRADNRRVDAKFILR 319
>gi|73540500|ref|YP_295020.1| OmpA/MotB [Ralstonia eutropha JMP134]
gi|72117913|gb|AAZ60176.1| OmpA/MotB [Ralstonia eutropha JMP134]
Length = 170
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 46/141 (32%), Positives = 68/141 (48%), Gaps = 5/141 (3%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
A +G D + ++ L + S SV+FD SYS++P +L
Sbjct: 32 AGANKGGTGADARTVQPVD----VSRDPLNDPNSPLAKRSVYFDFDSYSVKPEYQSMLGE 87
Query: 72 LGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
+ LI+G+ DE G+ ++ALG +RA AV G+S S+M+ S GK
Sbjct: 88 HAKYLGSNKGRKILIQGNTDERGTSEYNLALGQKRAEAVRRSLATMGVSDSQMEAVSLGK 147
Query: 131 EMPSVYGHDEDAYAKNRRAIV 151
E P GHDE A+A+NRRA +
Sbjct: 148 EKPKSTGHDEAAWAENRRADI 168
>gi|254262577|ref|ZP_04953442.1| OmpA family protein [Burkholderia pseudomallei 1710a]
gi|254213579|gb|EET02964.1| OmpA family protein [Burkholderia pseudomallei 1710a]
Length = 542
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 45/123 (36%), Gaps = 2/123 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHAD 90
+ +S + + F + P Q + + LI GHAD
Sbjct: 405 DTVLDSPRAASIAMQLDTVSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHAD 464
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS ++ L RA A+ ++FV +G+ +R V G P A+NRR
Sbjct: 465 SSGSDAANFQLSEARARAIRDWFVDQGVLKTRFIVQGAGDTHPIADNDSPSGRAQNRRVE 524
Query: 151 VFL 153
V L
Sbjct: 525 VLL 527
>gi|167583014|ref|ZP_02375888.1| OmpA domain protein [Burkholderia thailandensis TXDOH]
Length = 324
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++ F+T S ++ P +L + + + I GH D G+R S+IAL RA
Sbjct: 217 NRTIEFETGSATLTPQGRTILDQMAGALAKMPNRTVEIIGHTDNSGNRASNIALSQSRAD 276
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
AV Y V +GI++ ++ T G + P D A+NRR
Sbjct: 277 AVKGYLVTKGIASQQLTTTGVGPDQPIASNDSADGRARNRRIEF 320
>gi|34497346|ref|NP_901561.1| outer membrane protein [Chromobacterium violaceum ATCC 12472]
gi|34103202|gb|AAQ59565.1| probable outer membrane protein [Chromobacterium violaceum ATCC
12472]
Length = 223
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 1/129 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FL 84
+ + + + + ++ FDT+SY+++P+ VL L + L+++
Sbjct: 88 EQATKGTGIGVSQTADNRLKINIPSDASFDTNSYALKPSLKPVLDKLATTLQQNPVTSVN 147
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
I GH D GS + L + RA A Y +RG+ +R+ + G P A
Sbjct: 148 IIGHTDNTGSDAINNPLSVNRAKATQGYLASRGVDINRIGIDGRGSREPVADNGTVSGRA 207
Query: 145 KNRRAIVFL 153
NRR +++
Sbjct: 208 MNRRVEIYV 216
>gi|295704127|ref|YP_003597202.1| chemotaxis protein MotB [Bacillus megaterium DSM 319]
gi|294801786|gb|ADF38852.1| chemotaxis protein MotB [Bacillus megaterium DSM 319]
Length = 277
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 6/128 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
L S +E S+ D+V FD+ +R D ++ +++ + + +I GH D
Sbjct: 142 TNQLQTSLTEEGLLISIRDNVLFDSGRAQVRSEDTKIANDISELLVIDPPRNIIISGHTD 201
Query: 91 ELGSRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ RN+ R + +S S +G+ P + + AK
Sbjct: 202 NVPIRNAGFESNWELSVMRAVNFMKVILKNDKLSPSMFSAKGFGEFKPVTSNNTAEGQAK 261
Query: 146 NRRAIVFL 153
NRR + +
Sbjct: 262 NRRVEILI 269
>gi|206564091|ref|YP_002234854.1| putative OmpA/MotB family outer membrane protein [Burkholderia
cenocepacia J2315]
gi|198040131|emb|CAR56114.1| putative OmpA/MotB family outer membrane protein [Burkholderia
cenocepacia J2315]
Length = 169
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 1/118 (0%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRN 96
+ F + FD Y+++P +++ +G L + + G++D+ G+
Sbjct: 50 QETGQGFEFGSTGPILFDFDRYNLKPDVRRIVERIGRTLRSAGINGVRVYGYSDDEGTAA 109
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ L RRA V G+ A R+ V GK P A+NRRA + +
Sbjct: 110 YDLELSRRRAEVVAVELADVGLDAKRIAVVGRGKSDPVGDNKTPVGRAQNRRAAIVVS 167
>gi|58427732|gb|AAW76769.1| outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Xanthomonas oryzae pv. oryzae KACC10331]
Length = 272
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 2/134 (1%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVF-FDTSSYSIRPADIQVLS-NLGSWLEKHD 80
+T + +++ S Q ++G+ + F + S + P +++L + + D
Sbjct: 139 ASNTSYTVTNSLKLGGSEQGVLDQTLGNRIIEFQSGSSRLTPLGMRILDEMVEKMSQMKD 198
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
FLI GH D +G R S++AL RA AV +Y V +GI +RM V G + P
Sbjct: 199 ARFLIIGHTDNVGQRESNLALSQARAQAVKDYIVQKGIDGARMNVQGKGPDQPVADNASP 258
Query: 141 DAYAKNRRAIVFLK 154
D A+NRR ++
Sbjct: 259 DGRARNRRIQFKIQ 272
>gi|260751226|gb|ACX48919.1| cellulase [Streptomyces sp. GS11]
gi|307574878|gb|ADN52664.1| cellulase [uncultured bacterium]
Length = 340
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 43/110 (39%), Gaps = 1/110 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+V FD S ++ + + I G++D GS + L +RA AV
Sbjct: 229 TVQFDLESAEVK-DASNLSGTVDLMNTYPQAQVEITGYSDTTGSAAYNKQLTEKRAKAVA 287
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
+ F A+GI+A RM V G+ P NRR V + T
Sbjct: 288 DEFQAKGIAAERMTVKGMGEANPVASNETRQGRQMNRRVEVVVPAFEYQT 337
>gi|212712403|ref|ZP_03320531.1| hypothetical protein PROVALCAL_03491 [Providencia alcalifaciens DSM
30120]
gi|212685149|gb|EEB44677.1| hypothetical protein PROVALCAL_03491 [Providencia alcalifaciens DSM
30120]
Length = 582
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 48/130 (36%), Gaps = 2/130 (1%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFL 84
+ + ++ FD Y+++ +VL + L + K +
Sbjct: 424 PPQPDVAPEIPALTPAAPQMVTLDSLSLFDVGQYTLKTGATKVLVDALLNIKAKPGWLIM 483
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAY 143
+ G+ D G+ + L L+RA +V ++ IS V YG+ P D
Sbjct: 484 VSGYTDNTGNPELNQTLSLKRAESVRDWMIQTSDISPICFAVQGYGQNNPVADNRTADGR 543
Query: 144 AKNRRAIVFL 153
+NRR + L
Sbjct: 544 TRNRRVEIRL 553
>gi|261251125|ref|ZP_05943699.1| protein F-related protein [Vibrio orientalis CIP 102891]
gi|260937998|gb|EEX93986.1| protein F-related protein [Vibrio orientalis CIP 102891]
Length = 205
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALG 102
+ D++ F+T S ++ P L +GS+L D +I+GHAD G+ + L
Sbjct: 90 VMVKLKDTIKFNTGSSNVSPDSQYWLDMMGSYLATQPGIDIVIDGHADSTGAPTFNDGLS 149
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
++RA AV V ++ + YG+ +P+ + A NRR V
Sbjct: 150 MKRASAVKRQLVRNNVAMDSIFTRGYGEYVPACSNKTKAGKACNRRVEV 198
>gi|120437200|ref|YP_862886.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
gi|117579350|emb|CAL67819.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
Length = 522
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 9/138 (6%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHAD 90
+ + + + G ++FD +I+ VL ++ +++ + +E HAD
Sbjct: 372 APTVTDETSGQDIIPIDGSKIYFDFDKATIKAESKPVLDSVVTYMNDYPNIKVKVESHAD 431
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH-----DEDAYAK 145
GS + ++AL RRA + +Y V +GI +R+ YG+ P+ + YAK
Sbjct: 432 ARGSDSYNMALSKRRAASTVDYLVEKGIDKARLTSEGYGESRPTNDCTQPTGCTNEQYAK 491
Query: 146 NRRAIVFLK---GCRANT 160
NRR+ + G NT
Sbjct: 492 NRRSAFVVSNRNGSMNNT 509
>gi|134292200|ref|YP_001115936.1| OmpA/MotB domain-containing protein [Burkholderia vietnamiensis G4]
gi|134135357|gb|ABO56471.1| OmpA/MotB domain protein [Burkholderia vietnamiensis G4]
Length = 224
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 45/110 (40%), Gaps = 1/110 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLR 104
++ F T ++ PA L L S E H + G+ D GS +++AL R
Sbjct: 114 VNLAGDALFATGQATLTPAARASLDKLLSEREDHTYTEVTVTGYTDSAGSDAANLALSKR 173
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RA V Y A G+ A M V G P + A NRR + LK
Sbjct: 174 RADVVARYLHAHGLKAHTMAVAGRGSADPVGSNATAEGRAANRRVEISLK 223
>gi|332877182|ref|ZP_08444932.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332684925|gb|EGJ57772.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 284
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 6/114 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD----ELGSRNSSIA 100
S+ D++ + + SY I + LS + ++ + + LIEG+ D + ++
Sbjct: 148 ISLADNMLYKSGSYEISERAGETLSKIAKIIMDYKEYEVLIEGNTDTDPISRPNIRNNWD 207
Query: 101 LGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V G+ R+ G+ P + +NRR + +
Sbjct: 208 LSTLRASSVVQALQNTYGVDPKRLTAAGRGEYNPVASNDTPEGKMRNRRTQIII 261
>gi|16080024|ref|NP_390850.1| flagellar motor protein MotS [Bacillus subtilis subsp. subtilis
str. 168]
gi|221310916|ref|ZP_03592763.1| flagellar motor protein MotS [Bacillus subtilis subsp. subtilis
str. 168]
gi|221315243|ref|ZP_03597048.1| flagellar motor protein MotS [Bacillus subtilis subsp. subtilis
str. NCIB 3610]
gi|221320160|ref|ZP_03601454.1| flagellar motor protein MotS [Bacillus subtilis subsp. subtilis
str. JH642]
gi|221324441|ref|ZP_03605735.1| flagellar motor protein MotS [Bacillus subtilis subsp. subtilis
str. SMY]
gi|732300|sp|P39064|YTXE_BACSU RecName: Full=Uncharacterized protein YtxE
gi|348049|gb|AAA68283.1| putative [Bacillus subtilis]
gi|2293223|gb|AAC00301.1| YtxE [Bacillus subtilis]
gi|2635456|emb|CAB14950.1| putative flagellar motor apparatus component [Bacillus subtilis
subsp. subtilis str. 168]
gi|291485404|dbj|BAI86479.1| flagellar motor protein MotS [Bacillus subtilis subsp. natto
BEST195]
Length = 242
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 44/133 (33%), Gaps = 5/133 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ + + ++V FDT + +L + L+ D +EGH D
Sbjct: 109 AQMTAKRDERGVVLVLQEAVLFDTGEAKVLKNAETLLHQIAVLLQTIPNDIQVEGHTDSR 168
Query: 93 GS----RNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNR 147
S+ L RA V YF ++ R Y P + +NR
Sbjct: 169 NISTYRYPSNWELSAARASGVIQYFTSKEKLPSKRFIAVGYADTKPVKDNKTNEHMKENR 228
Query: 148 RAIVFLKGCRANT 160
R + +K + +
Sbjct: 229 RVEIVIKKSKTTS 241
>gi|158318969|ref|YP_001511477.1| OmpA/MotB domain-containing protein [Frankia sp. EAN1pec]
gi|158114374|gb|ABW16571.1| OmpA/MotB domain protein [Frankia sp. EAN1pec]
Length = 200
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 50/142 (35%), Gaps = 6/142 (4%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
+ +G S ++ E ++ + ++ V F S + A ++ L
Sbjct: 54 LDAAGSVLTIDPADSVLPLVTEERSGDRVTVTISADVLFAFDSDDLTEAARTEIATLAGR 113
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+ + GH D LG+ ++ L RRA AV + S +R+ T G P
Sbjct: 114 VGPATRTVTVLGHTDSLGTPAYNVILSQRRANAVADLLRPAVPSGTRVSATGRGGADPVA 173
Query: 136 YG------HDEDAYAKNRRAIV 151
D A NRR +
Sbjct: 174 PNTRPDGSDDAAGRALNRRVQI 195
>gi|189353340|ref|YP_001948967.1| hypothetical protein BMULJ_04580 [Burkholderia multivorans ATCC
17616]
gi|189337362|dbj|BAG46431.1| OmpA/MotB domain protein [Burkholderia multivorans ATCC 17616]
Length = 432
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 51/128 (39%), Gaps = 5/128 (3%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHA 89
+ TV + + + GD++F S++ + +++ + + + K I G+
Sbjct: 304 AAGTVSVDEDARRSVVTFRGDAMFRP-GGASVQASMNPLIAKIAAEIAKVPGKVTIVGYT 362
Query: 90 DELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
D + S+ AL RA V A G+ A+R++ G P A+
Sbjct: 363 DNVPIRSGQFASNQALSEERATQVMQMLQAAGVPANRLEAVGKGDADPVGDNRTAQGRAQ 422
Query: 146 NRRAIVFL 153
NRR + +
Sbjct: 423 NRRVEIDV 430
>gi|124005143|ref|ZP_01689985.1| outer membrane protein, putative [Microscilla marina ATCC 23134]
gi|123989395|gb|EAY28956.1| outer membrane protein, putative [Microscilla marina ATCC 23134]
Length = 329
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 62/137 (45%), Gaps = 1/137 (0%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+ N TK + D + + + ++ F T S + + L + L+
Sbjct: 191 ATTINKKTKQETKDQINIRLIPYKVGAKIPLYNITFATKSARLNTHSFEELGRVVKLLKD 250
Query: 79 HDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
H LIE H D G+R +++ L +RA +V+NY + +GI+A R++ G+ P
Sbjct: 251 HPTSHILIEAHTDSDGTRLANLRLSQQRAKSVYNYLMKQGIAAQRLQTRGAGELKPIAPN 310
Query: 138 HDEDAYAKNRRAIVFLK 154
+ E A+NRR + +
Sbjct: 311 NTEINKARNRRFELIVM 327
>gi|170725100|ref|YP_001759126.1| OmpA/MotB domain-containing protein [Shewanella woodyi ATCC 51908]
gi|169810447|gb|ACA85031.1| OmpA/MotB domain protein [Shewanella woodyi ATCC 51908]
Length = 497
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 44/107 (41%), Gaps = 2/107 (1%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYA 108
D + F+ S + P V+ + S+L+ H F + GH D+ G ++ + L +RA A
Sbjct: 387 DGLLFEFDSDKMLPEAKAVVKVVASYLKSHPKQRFYVIGHTDDQGKQSYNQLLSDKRAKA 446
Query: 109 VFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
V ++ G+ P +E NRR + L+
Sbjct: 447 VVKQLTTAHQIPKDQLTGKGVGEYSPVANNSNEAGQKLNRRVELVLR 493
>gi|149917198|ref|ZP_01905698.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
gi|149822114|gb|EDM81507.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
Length = 395
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 52/117 (44%), Gaps = 6/117 (5%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIR-----PADIQVLSNLGSWLEKHD-CDFLIEGHADELGS 94
+ + + + FD+ Y ++ ++ ++L ++ + L + I GH D GS
Sbjct: 267 VDPCAIKLDGKIMFDSGKYDLKSRKFADSNSKLLDDVYTVLNTNPDITIEIGGHTDSKGS 326
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
S+ L R +V Y V +GI SR+ YG+++P ++ NRR +
Sbjct: 327 SRSNQRLSENRVKSVREYLVDKGIDGSRITFKGYGEDVPVDTNRTKEGRENNRRVEI 383
>gi|85375559|ref|YP_459621.1| outer membrane protein [Erythrobacter litoralis HTCC2594]
gi|84788642|gb|ABC64824.1| outer membrane protein [Erythrobacter litoralis HTCC2594]
Length = 197
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/167 (22%), Positives = 65/167 (38%), Gaps = 21/167 (12%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDS---------------V 52
I+L+A + + D + S +E S D
Sbjct: 7 ILLTAALLSACQSEPAPDDVPDPDGEEVIGPSPEEPVSIIRPDIEEAVLIPLEPLNTTIS 66
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F D+ + A ++ + + S I GH+D G+ ++ + LRRA AV ++
Sbjct: 67 FADSGTDLTPEAVAELETLVESRQVTEGGPITIGGHSDAGGNDAVNMRVSLRRAEAVRDW 126
Query: 113 FVARGISASRMKVTSYGKEMPSVYGH------DEDAYAKNRRAIVFL 153
VARG+ R+ V ++G++ P +ED A NRR + +
Sbjct: 127 LVARGVDEGRITVIAFGEQNPVEPNALPDGQPNEDGRAANRRVEIRV 173
>gi|254225118|ref|ZP_04918732.1| chemotaxis protein PomB [Vibrio cholerae V51]
gi|125622505|gb|EAZ50825.1| chemotaxis protein PomB [Vibrio cholerae V51]
Length = 318
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 21/127 (16%), Positives = 42/127 (33%), Gaps = 5/127 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ +L +Q + + F S ++P ++ + ++ + GH D
Sbjct: 173 QGAIEVENLGQQIDIRIREKGAFPEGSAFLQPKFRPLVRQIAELVKDIPGKVRVTGHTDN 232
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S+ L +RA +V + R++V P E A N
Sbjct: 233 QKLDSELYRSNWDLSAQRAVSVAQEMEKVKDFDHLRLQVRGLADTQPLGPNDTEAQRATN 292
Query: 147 RRAIVFL 153
RR + +
Sbjct: 293 RRVEISI 299
>gi|15640909|ref|NP_230540.1| flagellar motor protein MotB [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121588125|ref|ZP_01677872.1| chemotaxis protein PomB [Vibrio cholerae 2740-80]
gi|121728326|ref|ZP_01681356.1| chemotaxis protein PomB [Vibrio cholerae V52]
gi|147674334|ref|YP_001216371.1| flagellar motor protein MotB [Vibrio cholerae O395]
gi|153216012|ref|ZP_01950234.1| flagellar motor protein [Vibrio cholerae 1587]
gi|153802297|ref|ZP_01956883.1| chemotaxis protein PomB [Vibrio cholerae MZO-3]
gi|153817212|ref|ZP_01969879.1| chemotaxis protein PomB [Vibrio cholerae NCTC 8457]
gi|153823690|ref|ZP_01976357.1| chemotaxis protein PomB [Vibrio cholerae B33]
gi|153827046|ref|ZP_01979713.1| chemotaxis protein PomB [Vibrio cholerae MZO-2]
gi|153830558|ref|ZP_01983225.1| chemotaxis protein PomB [Vibrio cholerae 623-39]
gi|227081069|ref|YP_002809620.1| chemotaxis protein PomB [Vibrio cholerae M66-2]
gi|229505502|ref|ZP_04395012.1| Flagellar motor rotation protein MotB [Vibrio cholerae BX 330286]
gi|229510828|ref|ZP_04400307.1| Flagellar motor rotation protein MotB [Vibrio cholerae B33]
gi|229513008|ref|ZP_04402474.1| Flagellar motor rotation protein MotB [Vibrio cholerae TMA 21]
gi|229517949|ref|ZP_04407393.1| Flagellar motor rotation protein MotB [Vibrio cholerae RC9]
gi|229523310|ref|ZP_04412717.1| Flagellar motor rotation protein MotB [Vibrio cholerae TM 11079-80]
gi|229525508|ref|ZP_04414913.1| Flagellar motor rotation protein MotB [Vibrio cholerae bv. albensis
VL426]
gi|229530005|ref|ZP_04419395.1| Flagellar motor rotation protein MotB [Vibrio cholerae 12129(1)]
gi|229608521|ref|YP_002879169.1| flagellar motor protein MotB [Vibrio cholerae MJ-1236]
gi|254285566|ref|ZP_04960530.1| chemotaxis protein PomB [Vibrio cholerae AM-19226]
gi|254848028|ref|ZP_05237378.1| flagellar motor protein PomB [Vibrio cholerae MO10]
gi|262191489|ref|ZP_06049674.1| Flagellar motor rotation protein MotB [Vibrio cholerae CT 5369-93]
gi|297581278|ref|ZP_06943202.1| chemotaxis protein PomB [Vibrio cholerae RC385]
gi|298498985|ref|ZP_07008792.1| flagellar motor protein PomB [Vibrio cholerae MAK 757]
gi|9655348|gb|AAF94055.1| chemotaxis protein PomB [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|51241597|emb|CAH17908.1| flagellar motor protein PomB [Vibrio cholerae]
gi|121547616|gb|EAX57715.1| chemotaxis protein PomB [Vibrio cholerae 2740-80]
gi|121629381|gb|EAX61811.1| chemotaxis protein PomB [Vibrio cholerae V52]
gi|124114525|gb|EAY33345.1| flagellar motor protein [Vibrio cholerae 1587]
gi|124122179|gb|EAY40922.1| chemotaxis protein PomB [Vibrio cholerae MZO-3]
gi|126512246|gb|EAZ74840.1| chemotaxis protein PomB [Vibrio cholerae NCTC 8457]
gi|126518793|gb|EAZ76016.1| chemotaxis protein PomB [Vibrio cholerae B33]
gi|146316217|gb|ABQ20756.1| chemotaxis protein PomB [Vibrio cholerae O395]
gi|148873956|gb|EDL72091.1| chemotaxis protein PomB [Vibrio cholerae 623-39]
gi|149739087|gb|EDM53383.1| chemotaxis protein PomB [Vibrio cholerae MZO-2]
gi|150424428|gb|EDN16365.1| chemotaxis protein PomB [Vibrio cholerae AM-19226]
gi|227008957|gb|ACP05169.1| chemotaxis protein PomB [Vibrio cholerae M66-2]
gi|227012713|gb|ACP08923.1| chemotaxis protein PomB [Vibrio cholerae O395]
gi|229333779|gb|EEN99265.1| Flagellar motor rotation protein MotB [Vibrio cholerae 12129(1)]
gi|229339089|gb|EEO04106.1| Flagellar motor rotation protein MotB [Vibrio cholerae bv. albensis
VL426]
gi|229339673|gb|EEO04688.1| Flagellar motor rotation protein MotB [Vibrio cholerae TM 11079-80]
gi|229344664|gb|EEO09638.1| Flagellar motor rotation protein MotB [Vibrio cholerae RC9]
gi|229349901|gb|EEO14855.1| Flagellar motor rotation protein MotB [Vibrio cholerae TMA 21]
gi|229350793|gb|EEO15734.1| Flagellar motor rotation protein MotB [Vibrio cholerae B33]
gi|229357725|gb|EEO22642.1| Flagellar motor rotation protein MotB [Vibrio cholerae BX 330286]
gi|229371176|gb|ACQ61599.1| Flagellar motor rotation protein MotB [Vibrio cholerae MJ-1236]
gi|254843733|gb|EET22147.1| flagellar motor protein PomB [Vibrio cholerae MO10]
gi|262032637|gb|EEY51190.1| Flagellar motor rotation protein MotB [Vibrio cholerae CT 5369-93]
gi|297534594|gb|EFH73431.1| chemotaxis protein PomB [Vibrio cholerae RC385]
gi|297543318|gb|EFH79368.1| flagellar motor protein PomB [Vibrio cholerae MAK 757]
Length = 318
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 21/127 (16%), Positives = 42/127 (33%), Gaps = 5/127 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ +L +Q + + F S ++P ++ + ++ + GH D
Sbjct: 173 QGAIEVENLGQQIDIRIREKGAFPEGSAFLQPKFRPLVRQIAELVKDIPGKVRVTGHTDN 232
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S+ L +RA +V + R++V P E A N
Sbjct: 233 QKLDSELYRSNWDLSAQRAVSVAQEMEKVKDFDHLRLQVRGLADTQPLGPNDTEAQRATN 292
Query: 147 RRAIVFL 153
RR + +
Sbjct: 293 RRVEISI 299
>gi|118578882|ref|YP_900132.1| OmpA/MotB domain-containing protein [Pelobacter propionicus DSM
2379]
gi|118501592|gb|ABK98074.1| OmpA/MotB domain protein [Pelobacter propionicus DSM 2379]
Length = 417
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 55/132 (41%), Gaps = 3/132 (2%)
Query: 22 DNLDTKISSPDTVLNESSL-QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKH 79
D+ D +P+ + + + S ++ FDT+ +I+P L + + E
Sbjct: 278 DSYDKCPGTPEGTTVDKTGCPVKLCSPTVLNIEFDTNKSNIKPQYNDELKRVADFLAEFP 337
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGH 138
IEGH D +G + ++ L RRA +V +Y + ++ R+ +G P
Sbjct: 338 TAKGAIEGHTDNVGGKAYNMKLSQRRANSVRSYLIKTFNVAPERISAKGHGLTKPVASNK 397
Query: 139 DEDAYAKNRRAI 150
D +NRR
Sbjct: 398 TADGRKQNRRIE 409
>gi|237508587|ref|ZP_04521302.1| type IV/VI secretion system protein, DotU family [Burkholderia
pseudomallei MSHR346]
gi|235000792|gb|EEP50216.1| type IV/VI secretion system protein, DotU family [Burkholderia
pseudomallei MSHR346]
Length = 439
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 40/123 (32%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
L + F + + P VL + + + + GH+D
Sbjct: 315 LTVDEDDRRSVVVFRGDSMFRSGESRVLPEIEPVLDKVAREVARVGGRVTVTGHSDNQPI 374
Query: 95 RNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
R + I L +RA V V RG A R++ G P ++NRR
Sbjct: 375 RRADIPNNLVLSEKRAAYVAQILVQRGTPADRIRSEGRGDAQPVAENATPAGRSRNRRVE 434
Query: 151 VFL 153
+ +
Sbjct: 435 IAV 437
>gi|238783359|ref|ZP_04627383.1| hypothetical protein yberc0001_33370 [Yersinia bercovieri ATCC
43970]
gi|238715782|gb|EEQ07770.1| hypothetical protein yberc0001_33370 [Yersinia bercovieri ATCC
43970]
Length = 574
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 40/103 (38%), Gaps = 2/103 (1%)
Query: 53 FFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FD ++ +VL N L K ++ GH D G S+ L L+RA +V N
Sbjct: 443 LFDVGKSELKSGSTKVLINALVGIKAKPGWLIVVAGHTDITGDDKSNQTLSLKRAESVRN 502
Query: 112 YFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ G V YG+ P E A NRR + L
Sbjct: 503 WMRDTGDIPESCFAVQGYGQSRPLQSNDTEAGRAANRRVEISL 545
>gi|300714997|ref|YP_003739800.1| outer membrane protein [Erwinia billingiae Eb661]
gi|299060833|emb|CAX57940.1| Outer membrane protein [Erwinia billingiae Eb661]
Length = 564
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 44/123 (35%), Gaps = 2/123 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADE 91
+ + FDT ++P +++L L + ++ GH D
Sbjct: 414 PPAPSVAKDTPKIVRLDSLSLFDTGKAVLKPGSLKMLVTALVDIKARPGWLIVVAGHTDS 473
Query: 92 LGSRNSSIALGLRRAYAVFNY-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G+ ++ L L RA A+ ++ +S + V +G P A NRR
Sbjct: 474 TGNVLANQQLSLTRADALRDWMLSTSDVSPTCFAVQGFGASRPIATNDTPAGRALNRRVE 533
Query: 151 VFL 153
+ L
Sbjct: 534 ISL 536
>gi|158422035|ref|YP_001523327.1| outer membrane protein [Azorhizobium caulinodans ORS 571]
gi|158328924|dbj|BAF86409.1| outer membrane protein [Azorhizobium caulinodans ORS 571]
Length = 381
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 2/103 (1%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+ FD +S I+P L + S + D ++ GH D +G +S++ L RA AV
Sbjct: 277 ILFDFNSAVIKPESKATLDEIASLLRKAPDLKLVVVGHTDNVGGMDSNMKLSQARAEAVR 336
Query: 111 NYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
V + A+ R++ G P ++ AKNRR +
Sbjct: 337 RALVEQYAIAAARLQAWGAGFMAPVASNRTDEGRAKNRRVELV 379
>gi|237756519|ref|ZP_04585048.1| chemotaxis protein MotB [Sulfurihydrogenibium yellowstonense SS-5]
gi|237691319|gb|EEP60398.1| chemotaxis protein MotB [Sulfurihydrogenibium yellowstonense SS-5]
Length = 264
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 7/132 (5%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ ++ + + D + F S I ++L+ + +++ +EGH D+
Sbjct: 100 EGKVSVEVIPMGVRIRILDYILFPPCSTEINQEYKELLNGIAEVIKEAKLPVEVEGHTDD 159
Query: 92 L-----GSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAK 145
+ S+ L RA AV Y + G + Y P + E
Sbjct: 160 IPPGPTCIYPSNWELSASRAAAVVRYLITAGNLPPYLFSAVGYADTKPISPNNSELGRKL 219
Query: 146 NRRAIV-FLKGC 156
NRR + + G
Sbjct: 220 NRRIEINLITGT 231
>gi|253990531|ref|YP_003041887.1| hypothetical protein PAU_03057 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|211638897|emb|CAR67512.1| similar to putative membrane protein [Photorhabdus asymbiotica
subsp. asymbiotica ATCC 43949]
gi|253781981|emb|CAQ85145.1| similar to putative membrane protein [Photorhabdus asymbiotica]
Length = 583
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 46/141 (32%), Gaps = 8/141 (5%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LG 73
+ + D + P T + S+ FD ++ +VL N L
Sbjct: 415 LQAAIASDVAEPSEKKPVTTAVPQT------ISLNSLALFDVGQAKLKVGSTKVLVNALI 468
Query: 74 SWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEM 132
+ K I G+ D G + AL L RA AV ++ + + V G
Sbjct: 469 NIRAKPGWLIAITGYTDSTGDAAKNRALSLARAEAVRDWLLQTSDIPLACFAVQGEGATR 528
Query: 133 PSVYGHDEDAYAKNRRAIVFL 153
P A NRR + L
Sbjct: 529 PVATNSTAAGRAANRRVEIRL 549
>gi|153952340|ref|YP_001398779.1| fibronectin-binding protein [Campylobacter jejuni subsp. doylei
269.97]
gi|152939786|gb|ABS44527.1| fibronectin-binding protein [Campylobacter jejuni subsp. doylei
269.97]
Length = 319
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 54/144 (37%), Gaps = 3/144 (2%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+ ++ + + ++ FD +I + + +
Sbjct: 176 AVEEVADTRPAPQAKCPVEPRGGALLDENGCEKTISLEGHFDFDKTTINLTFQEKIKEIA 235
Query: 74 SW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
E D ++EGH D +GSR + L RRA +V N G+ SR+K YG++
Sbjct: 236 KVLDENERYDTILEGHTDNIGSRAYNQKLSERRAKSVANELEKYGVEKSRIKTVGYGQDN 295
Query: 133 PSVYGHDEDAYAKNRRAI--VFLK 154
P + ++ A NRR L+
Sbjct: 296 PRSSNNTKEGRADNRRVDAKFILR 319
>gi|83643665|ref|YP_432100.1| outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hahella chejuensis KCTC 2396]
gi|83631708|gb|ABC27675.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hahella chejuensis KCTC 2396]
Length = 494
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 52/124 (41%), Gaps = 4/124 (3%)
Query: 34 VLNESSLQEQFSSSV--GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHAD 90
L E+ + Q ++ + F + S ++ ++ +L+ + +E I GH D
Sbjct: 364 TLTEADVYRQNANVLIRAHGFKFASGSSEVQRDNVTLLNKIIDAIEAFPNCKIRISGHTD 423
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
G R + +L +RA V + I +SR++ +G P ++ A NRR
Sbjct: 424 NRGDRALNQSLSEKRASNVAKFLANVGSIDSSRIEAEGFGASRPVANNDTKEGRAANRRV 483
Query: 150 IVFL 153
V +
Sbjct: 484 EVLI 487
>gi|260890076|ref|ZP_05901339.1| hypothetical protein GCWU000323_01238 [Leptotrichia hofstadii
F0254]
gi|260860099|gb|EEX74599.1| OmpA family protein [Leptotrichia hofstadii F0254]
Length = 155
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+ FD ++P ++L N+ ++E+++ + I GH D G+ ++ALG+RRA AV
Sbjct: 49 RLNFDFDKSVVKPQYFELLRNVKDYVEQNNLNLRIIGHTDSKGTDAYNMALGMRRANAVK 108
Query: 111 NYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ G+ +R+ V S G+ P E +NRR
Sbjct: 109 AKLLEFGLDPARIIGVESMGESDPIAPNDTEQGRFENRRIQFK 151
>gi|187251682|ref|YP_001876164.1| outer membrane protein [Elusimicrobium minutum Pei191]
gi|186971842|gb|ACC98827.1| Outer membrane protein [Elusimicrobium minutum Pei191]
Length = 172
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 1 MQYSTIFIILSAITMMSISGI-----------DNLDTKISSPDTVLNESSLQEQFSSS-- 47
M+ + I I + A ++SI+ D + ++ D V+ E+ + ++
Sbjct: 1 MK-NLIKIAMVACLVLSIAACRKNVQNDDMLADENLSAPTTVDVVVEETPVIIDVQNTEI 59
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD----FLIEGHADELGSRNSSIALGL 103
V F Y++ A +VL++ + ++ + ++EGH DE G+ + +IALG
Sbjct: 60 ALRQVNFALDKYNLSDAAKKVLADNAALIKTKTANAAFNIVVEGHCDERGTISYNIALGE 119
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+RA V NY+ G+ A + SYG+E P Y E+ YAKNRRA L
Sbjct: 120 KRANEVKNYYTRLGVPAKNIVTVSYGEEKPLCYDATENCYAKNRRAETVL 169
>gi|301026373|ref|ZP_07189819.1| OmpA family protein [Escherichia coli MS 69-1]
gi|300395559|gb|EFJ79097.1| OmpA family protein [Escherichia coli MS 69-1]
Length = 160
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 55/149 (36%), Gaps = 3/149 (2%)
Query: 8 IILSAITMMSISGIDNL-DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADI 66
+I +++ + + + + +S + D++ F + Y + P
Sbjct: 9 LIFTSLILTGCQSPQGKFTPEQVAAMQSYGFTESAGDWSLGLSDAILFAKNDYKLLPESQ 68
Query: 67 QVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMK 124
Q + + + L ++GH D G + + AL L+RA V + + G +
Sbjct: 69 QQIQTMAAKLASTGLTHARMDGHTDNYGEDSYNEALSLKRANVVADAWAMGGQIPRSNLT 128
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
GK+ P A+NRR V +
Sbjct: 129 TQGLGKKYPIASNKTAQGRAENRRVAVVI 157
>gi|167740993|ref|ZP_02413767.1| OmpA family protein [Burkholderia pseudomallei 14]
Length = 558
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 45/123 (36%), Gaps = 2/123 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHAD 90
+ +S + + F + P Q + + LI GHAD
Sbjct: 421 DTVLDSPRTASIAMQLDTVSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHAD 480
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS ++ L RA A+ ++FV +G+ +R V G P A+NRR
Sbjct: 481 SSGSDAANFQLSEARARAIRDWFVDQGVLKTRFIVQGAGDTHPIADNDSPSGRAQNRRVE 540
Query: 151 VFL 153
V L
Sbjct: 541 VLL 543
>gi|91775931|ref|YP_545687.1| OmpA/MotB [Methylobacillus flagellatus KT]
gi|91709918|gb|ABE49846.1| OmpA/MotB [Methylobacillus flagellatus KT]
Length = 363
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 51/149 (34%), Gaps = 9/149 (6%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ + P + ++ V F +++ L+ K
Sbjct: 214 AVAPEPEPVVEPAPAPVGPAEPAFEKVTLSSEVLFGFDKDNLKEEGKAKLNADVVEKMKA 273
Query: 80 DCDFL---IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ I GH D +G + L RRA V Y +++GI SR+ G+ P V
Sbjct: 274 HPEVELVLITGHTDRIGDETYNQKLSERRANTVKQYLISQGIEESRLHAVGKGESEPVVE 333
Query: 137 GHD------EDAYAKNRRAIVFLKGCRAN 159
+ NRR +V ++ RA+
Sbjct: 334 CAGVRGKKAIECLQPNRRVVVEIEVQRAS 362
>gi|315187219|gb|EFU20976.1| OmpA/MotB domain protein [Spirochaeta thermophila DSM 6578]
Length = 430
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 48/138 (34%), Gaps = 4/138 (2%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVG---DSVFFDTSSYSIRPADIQVLSNLGSW- 75
+ L E + E+ + ++ F + P + L L
Sbjct: 290 STTLTSPSPAEELASLGEENSVEKVPEGIKITLRTLHFLPDQAVLLPGEEAKLDILAEAL 349
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+ D L+ GH ++G +AL + RA + V RGI R+ G P
Sbjct: 350 KKAPDRTILVVGHTADVGKPQGQMALSVARAKTIVEELVKRGIEPDRLIYLGKGGTEPVA 409
Query: 136 YGHDEDAYAKNRRAIVFL 153
H E+ NRR +FL
Sbjct: 410 PNHTEEGRRLNRRVEIFL 427
>gi|167741000|ref|ZP_02413774.1| hypothetical protein Bpse14_23241 [Burkholderia pseudomallei 14]
Length = 433
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 39/123 (31%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
L + F + + VL + + + + GH+D
Sbjct: 309 LTVDEDDRRSVVVFRGDSMFRSGESRVLSEIEPVLDKVAREVARVGGRVTVTGHSDNQPI 368
Query: 95 RNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
R + I L +RA V V RG A R++ G P ++NRR
Sbjct: 369 RRADIPNNLVLSEKRAAYVAQILVQRGTPADRIRSEGRGDAQPVAENATPAGRSRNRRVE 428
Query: 151 VFL 153
+ +
Sbjct: 429 IAV 431
>gi|152976910|ref|YP_001376427.1| flagellar motor protein MotB [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|152025662|gb|ABS23432.1| OmpA/MotB domain protein [Bacillus cytotoxicus NVH 391-98]
Length = 265
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 49/128 (38%), Gaps = 6/128 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHAD 90
+ ++ ++ ++V FD+ ++P + + + + L + + GH D
Sbjct: 130 SSSFKTKLTEQGLMITILENVLFDSGKADVKPESLNIANEMSHLLLSAAPREITVSGHTD 189
Query: 91 ELGSRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ NS + R + + + ++ T YG+ P+ + AK
Sbjct: 190 NVPITNSQFSSNWELSTQRAVNFMQVLLQNKQLDPAKFSATGYGEYRPATSNDTSEGKAK 249
Query: 146 NRRAIVFL 153
NRR VF+
Sbjct: 250 NRRVEVFI 257
>gi|254254565|ref|ZP_04947882.1| OmpA domain protein [Burkholderia dolosa AUO158]
gi|124899210|gb|EAY71053.1| OmpA domain protein [Burkholderia dolosa AUO158]
Length = 226
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 1/143 (0%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL 72
T++ G + ++ ++ ++ F T + ++ PA L L
Sbjct: 83 ATLVFQCGAAPAEPASAAEPAPAAAAAPAAVEHVNLAGDALFATGAATLTPAARASLDKL 142
Query: 73 -GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
+ ++ + I G+ D +GS S++AL RRA AV Y A G+ + VT G
Sbjct: 143 LSARDDRTYSNVTITGYTDSVGSDASNVALSKRRAQAVAAYLNAHGLKTRTLTVTGRGSA 202
Query: 132 MPSVYGHDEDAYAKNRRAIVFLK 154
P D A NRR + L+
Sbjct: 203 DPVASNATADGRASNRRVEISLQ 225
>gi|331674046|ref|ZP_08374808.1| YfiB [Escherichia coli TA280]
gi|331068785|gb|EGI40178.1| YfiB [Escherichia coli TA280]
Length = 160
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 55/149 (36%), Gaps = 3/149 (2%)
Query: 8 IILSAITMMSISGIDNL-DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADI 66
+I +++ + + + + +S + D++ F + Y + P
Sbjct: 9 LIFTSLILTGCQSPQGKFTPEQVAAMQSYGFTESAGDWSLGLSDAILFAKNDYKLLPESQ 68
Query: 67 QVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMK 124
Q + + + L ++GH D G + + AL L+RA V + + G +
Sbjct: 69 QQIQTMAAKLASTGLTHARMDGHTDNYGEDSYNEALSLKRANVVADAWAMGGQIPRSNLT 128
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
GK+ P A+NRR V +
Sbjct: 129 TQGLGKKYPIASNKTAQGRAENRRVAVVI 157
>gi|188575566|ref|YP_001912495.1| OmpA family domain protein [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188520018|gb|ACD57963.1| OmpA family domain protein [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 268
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 2/134 (1%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVF-FDTSSYSIRPADIQVLS-NLGSWLEKHD 80
+T + +++ S Q ++G+ + F + S + P +++L + + D
Sbjct: 135 ASNTSYTVTNSLKLGGSEQGVLDQTLGNRIIEFQSGSSRLTPLGMRILDEMVEKMSQMKD 194
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
FLI GH D +G R S++AL RA AV +Y V +GI +RM V G + P
Sbjct: 195 ARFLIIGHTDNVGQRESNLALSQARAQAVKDYIVQKGIDGARMNVQGKGPDQPVADNASP 254
Query: 141 DAYAKNRRAIVFLK 154
D A+NRR ++
Sbjct: 255 DGRARNRRIQFKIQ 268
>gi|83717470|ref|YP_438322.1| hypothetical protein BTH_II0120 [Burkholderia thailandensis E264]
gi|257141351|ref|ZP_05589613.1| hypothetical protein BthaA_19409 [Burkholderia thailandensis E264]
gi|83651295|gb|ABC35359.1| unnamed protein product; Similar to putative exported protein
[Burkholderia thailandensis E264]
Length = 558
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 44/114 (38%), Gaps = 2/114 (1%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHADELGSRNSSI 99
E + + F T + P Q + + LI GH+D GS ++
Sbjct: 430 ESTAMQLDTVTLFATGQATFSPGAAQRELQHALRMILANPEQRVLIVGHSDSAGSDAVNL 489
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA A+ ++FV +G+ +R V G P A+NRR + L
Sbjct: 490 QLSKARARAIRDWFVDQGVLKTRFIVQGAGDTHPVADNASPLGRAQNRRVEILL 543
>gi|83718754|ref|YP_443463.1| OmpA domain-containing protein [Burkholderia thailandensis E264]
gi|167621163|ref|ZP_02389794.1| OmpA domain protein [Burkholderia thailandensis Bt4]
gi|257137752|ref|ZP_05586014.1| OmpA domain-containing protein [Burkholderia thailandensis E264]
gi|83652579|gb|ABC36642.1| OmpA domain protein [Burkholderia thailandensis E264]
Length = 311
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++ F+T S ++ P +L + + + I GH D G+R S+IAL RA
Sbjct: 204 NRTIEFETGSATLTPQGRTILDQMAGALAKMPNRTVEIIGHTDNSGNRASNIALSQSRAD 263
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
AV Y V +GI++ ++ T G + P D A+NRR
Sbjct: 264 AVKGYLVTKGIASQQLTTTGVGPDQPIASNDSADGRARNRRIEF 307
>gi|87121179|ref|ZP_01077070.1| OmpA family protein [Marinomonas sp. MED121]
gi|86163671|gb|EAQ64945.1| OmpA family protein [Marinomonas sp. MED121]
Length = 201
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
++ F ++ + +R + L + + + +IEGH D G + + L +RA A+
Sbjct: 77 NILFVSNRFEVRRRYYSEVKKLADFLRKNPSSNVVIEGHTDNTGHNHHNQQLSQQRAQAI 136
Query: 110 FNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
N + A R+K YG+ P AKNRR + +
Sbjct: 137 ANILIKTFSIAQSRVKAIGYGETRPIASNLSAQGKAKNRRVVAEV 181
>gi|254249905|ref|ZP_04943225.1| Outer membrane protein [Burkholderia cenocepacia PC184]
gi|124876406|gb|EAY66396.1| Outer membrane protein [Burkholderia cenocepacia PC184]
Length = 221
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 1/110 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNSSIALGLR 104
++ F T ++ P + L L ++ + G D +GS + ++AL R
Sbjct: 111 VNLSGDALFATDHATLAPTARESLDRLLSERADRTYSQVTVTGFTDSVGSDDYNLALSKR 170
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RA AV Y A G+ M V+ GK P + A NRR + L+
Sbjct: 171 RAEAVAAYLKAHGLKTDSMTVSGRGKADPVASNATPEGRASNRRVEIRLQ 220
>gi|330807377|ref|YP_004351839.1| lipoprotein [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|327375485|gb|AEA66835.1| Putative lipoprotein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 167
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 53/141 (37%), Gaps = 6/141 (4%)
Query: 19 SGIDNLDTKISSPDTVLNESS-----LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
SG K +P + + ++ + V F + ++ PA +++ +G
Sbjct: 24 SGCQTAPQKGLTPAQIAVLKQQGFELTDDGWAFGLSGKVLFGSDVENLNPASTEIVERIG 83
Query: 74 SWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
L ++GH D GS+ + L +RRA +V A G+ +++ G
Sbjct: 84 KALLGAGIQRVRVDGHTDASGSQAYNEQLSMRRAASVSKVLTAVGMREENVQLRGLGSSK 143
Query: 133 PSVYGHDEDAYAKNRRAIVFL 153
P +NRR + +
Sbjct: 144 PVASNDTASGRTENRRVAIVV 164
>gi|319953189|ref|YP_004164456.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
gi|319421849|gb|ADV48958.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
Length = 604
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
++ FDT S +I + L + + ++ D +EGH D+ GS ++ L RRA AV
Sbjct: 498 NISFDTGSANISSSSQSTLETIYNLLIQAEDTKLSLEGHTDDTGSSEANYDLSQRRAQAV 557
Query: 110 FNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
N+ +GI +R + V G++ P AKNRR ++ L
Sbjct: 558 VNFLRTKGIPQTRFQNVIGKGEDEPVESNTTNSGRAKNRRVVIVL 602
>gi|255530239|ref|YP_003090611.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366]
gi|255343223|gb|ACU02549.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366]
Length = 280
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 48/131 (36%), Gaps = 7/131 (5%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHA 89
+ L + S+ D + F + S I Q L+ L ++ + + +EGH
Sbjct: 138 TQSGLTVEIKNGKVYVSLTDKLLFPSGSIIIDEKGKQALTQLADVLKQQPEINIAVEGHT 197
Query: 90 DELGSRN-----SSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAY 143
D N + L + R+ +V + RM T G+ P ++
Sbjct: 198 DSQKITNLGQIKDNWDLSVLRSTSVVRFLTEICKVQPVRMTATGKGEFQPLGPNTSAESR 257
Query: 144 AKNRRAIVFLK 154
+KNRR + L
Sbjct: 258 SKNRRIEIVLS 268
>gi|221196011|ref|ZP_03569058.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M]
gi|221202685|ref|ZP_03575704.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2]
gi|221176619|gb|EEE09047.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2]
gi|221182565|gb|EEE14965.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M]
Length = 484
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 51/128 (39%), Gaps = 5/128 (3%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHA 89
+ TV + + + GD++F S++ + +++ + + + K I G+
Sbjct: 356 AAGTVSVDEDARRSVVTFRGDAMFRP-GGASVQASMNPLIAKIAAEIAKVPGKVTIVGYT 414
Query: 90 DELGSRNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
D + R+ A L RA V A G+ A+R++ G P A+
Sbjct: 415 DNVPIRSRQFASNQALSEERATQVMQMLQAAGVQANRLEAVGKGDADPVGDNRTAQGRAQ 474
Query: 146 NRRAIVFL 153
NRR + +
Sbjct: 475 NRRVEIDV 482
>gi|84624974|ref|YP_452346.1| putative lipoprotein [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|84368914|dbj|BAE70072.1| putative lipoprotein [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 266
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 2/134 (1%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVF-FDTSSYSIRPADIQVLS-NLGSWLEKHD 80
+T + +++ S Q ++G+ + F + S + P +++L + + D
Sbjct: 133 ASNTSYTVTNSLKLGGSEQGVLDQTLGNRIIEFQSGSSRLTPLGMRILDEMVEKMSQMKD 192
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
FLI GH D +G R S++AL RA AV +Y V +GI +RM V G + P
Sbjct: 193 ARFLIIGHTDNVGQRESNLALSQARAQAVKDYIVQKGIDGARMNVQGKGPDQPVADNASP 252
Query: 141 DAYAKNRRAIVFLK 154
D A+NRR ++
Sbjct: 253 DGRARNRRIQFKIQ 266
>gi|331006223|ref|ZP_08329545.1| Outer membrane protein [gamma proteobacterium IMCC1989]
gi|330419980|gb|EGG94324.1| Outer membrane protein [gamma proteobacterium IMCC1989]
Length = 338
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 56/138 (40%), Gaps = 9/138 (6%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
I++ + V S + + V F ++S + A + + NL ++++++
Sbjct: 196 CQKAGGVINAGNCVKKSVSTDK-----ITLKVEFASNSDKVPSAYLPEIENLATFMQQYP 250
Query: 81 -CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGH 138
+I GH D GS + +L RR V A + ASR+ YG+ P
Sbjct: 251 TATAVIGGHTDSTGSAEYNQSLSQRRVNEVARLLSANYGVDASRVSAIGYGEAQPIAGND 310
Query: 139 DEDAYAKNRRAI--VFLK 154
AKNRR + ++
Sbjct: 311 TAVDRAKNRRVEASITVE 328
>gi|224372379|ref|YP_002606751.1| lipoprotein [Nautilia profundicola AmH]
gi|223589117|gb|ACM92853.1| lipoprotein [Nautilia profundicola AmH]
Length = 195
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 2/132 (1%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+ N++ + T ++ ++ Q+ V+FD Y+IRP + L ++
Sbjct: 57 TQNANVEEQTIGEGTKISVTADQKFAKDLANIVVYFDFDKYNIRPDQWPKVEKLAELIKN 116
Query: 79 HD--CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ IEG+ DE G+ + ALGL+RA +V N + G+ ++ + SYG+ P
Sbjct: 117 NPANYTVRIEGNCDEWGTEEYNYALGLKRANSVKNALIKLGVDPKKLTIISYGELNPVCT 176
Query: 137 GHDEDAYAKNRR 148
H + + KNRR
Sbjct: 177 AHAKWCWRKNRR 188
>gi|15803127|ref|NP_289158.1| putative outer membrane lipoprotein [Escherichia coli O157:H7
EDL933]
gi|15832722|ref|NP_311495.1| outer membrane lipoprotein [Escherichia coli O157:H7 str. Sakai]
gi|168752055|ref|ZP_02777077.1| OmpA family protein [Escherichia coli O157:H7 str. EC4113]
gi|168762397|ref|ZP_02787404.1| OmpA family protein [Escherichia coli O157:H7 str. EC4501]
gi|168773468|ref|ZP_02798475.1| OmpA family protein [Escherichia coli O157:H7 str. EC4196]
gi|168778583|ref|ZP_02803590.1| OmpA family protein [Escherichia coli O157:H7 str. EC4076]
gi|195940199|ref|ZP_03085581.1| putative outer membrane lipoprotein [Escherichia coli O157:H7 str.
EC4024]
gi|208807469|ref|ZP_03249806.1| OmpA family protein [Escherichia coli O157:H7 str. EC4206]
gi|208813697|ref|ZP_03255026.1| OmpA family protein [Escherichia coli O157:H7 str. EC4045]
gi|208820246|ref|ZP_03260566.1| OmpA family protein [Escherichia coli O157:H7 str. EC4042]
gi|209399323|ref|YP_002272076.1| OmpA family protein [Escherichia coli O157:H7 str. EC4115]
gi|217327416|ref|ZP_03443499.1| OmpA family protein [Escherichia coli O157:H7 str. TW14588]
gi|254794551|ref|YP_003079388.1| putative outer membrane lipoprotein [Escherichia coli O157:H7 str.
TW14359]
gi|12517027|gb|AAG57716.1|AE005490_11 putative outer membrane protein [Escherichia coli O157:H7 str.
EDL933]
gi|13362939|dbj|BAB36891.1| putative outer membrane protein [Escherichia coli O157:H7 str.
Sakai]
gi|187770670|gb|EDU34514.1| OmpA family protein [Escherichia coli O157:H7 str. EC4196]
gi|188014012|gb|EDU52134.1| OmpA family protein [Escherichia coli O157:H7 str. EC4113]
gi|189003592|gb|EDU72578.1| OmpA family protein [Escherichia coli O157:H7 str. EC4076]
gi|189367264|gb|EDU85680.1| OmpA family protein [Escherichia coli O157:H7 str. EC4501]
gi|208727270|gb|EDZ76871.1| OmpA family protein [Escherichia coli O157:H7 str. EC4206]
gi|208734974|gb|EDZ83661.1| OmpA family protein [Escherichia coli O157:H7 str. EC4045]
gi|208740369|gb|EDZ88051.1| OmpA family protein [Escherichia coli O157:H7 str. EC4042]
gi|209160723|gb|ACI38156.1| OmpA family protein [Escherichia coli O157:H7 str. EC4115]
gi|209762580|gb|ACI79602.1| putative outer membrane protein [Escherichia coli]
gi|209762582|gb|ACI79603.1| putative outer membrane protein [Escherichia coli]
gi|209762586|gb|ACI79605.1| putative outer membrane protein [Escherichia coli]
gi|217319783|gb|EEC28208.1| OmpA family protein [Escherichia coli O157:H7 str. TW14588]
gi|254593951|gb|ACT73312.1| predicted outer membrane lipoprotein [Escherichia coli O157:H7 str.
TW14359]
gi|320188940|gb|EFW63599.1| Integral membrane protein YfiB [Escherichia coli O157:H7 str.
EC1212]
gi|326344357|gb|EGD68115.1| Integral membrane protein YfiB [Escherichia coli O157:H7 str. 1125]
gi|326347726|gb|EGD71443.1| Integral membrane protein YfiB [Escherichia coli O157:H7 str. 1044]
Length = 160
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 54/149 (36%), Gaps = 3/149 (2%)
Query: 8 IILSAITMMSISGIDNL-DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADI 66
+I +++ + + + + +S + D++ F + Y + P
Sbjct: 9 LIFTSLILTGCQSPQGKFTPEQVAAMQSYGFTESAGDWSLGLSDAILFAKNDYKLLPESQ 68
Query: 67 QVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMK 124
Q + + + L ++GH D G + + L L+RA V + + G +
Sbjct: 69 QQIQTMAAKLASTGLTHARMDGHTDNYGEDSYNEGLSLKRANVVADAWAMGGQIPRSNLT 128
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
GK+ P A+NRR V +
Sbjct: 129 TQGLGKKYPIASNKTAQGRAENRRVAVVI 157
>gi|156974345|ref|YP_001445252.1| hypothetical protein VIBHAR_02060 [Vibrio harveyi ATCC BAA-1116]
gi|156525939|gb|ABU71025.1| hypothetical protein VIBHAR_02060 [Vibrio harveyi ATCC BAA-1116]
Length = 219
Score = 72.5 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
V E + Q + + + F +SSY + + L + +E D +I+G+ D
Sbjct: 93 SGVQVERVGENQLLLRMENGIGFSSSSYQLDSSIHNTLRGVARILVEYPDTSLVIDGYTD 152
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + + L RRA +V Y V++ ++ R YG+ P D A NRR
Sbjct: 153 STGSDSYNQTLSERRAESVRQYLVSQKVAPGRAIARGYGERNPICSNQTSDGRACNRRVE 212
Query: 151 VFL 153
+ +
Sbjct: 213 IQI 215
>gi|170681549|ref|YP_001744788.1| putative outer membrane lipoprotein [Escherichia coli SMS-3-5]
gi|218701117|ref|YP_002408746.1| putative outer membrane lipoprotein [Escherichia coli IAI39]
gi|170519267|gb|ACB17445.1| OmpA family protein [Escherichia coli SMS-3-5]
gi|218371103|emb|CAR18931.1| putative outer membrane lipoprotein [Escherichia coli IAI39]
Length = 160
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 54/150 (36%), Gaps = 3/150 (2%)
Query: 8 IILSAITMMSISGIDNL-DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADI 66
+I +++ + + + + +S + D++ F + Y + P
Sbjct: 9 LIFTSLILTGCQSPQGKFTPEQVAAMQSYGFTESAGDWSLGLSDAILFAKNDYKLLPESQ 68
Query: 67 QVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMK 124
Q + + + L ++GH D G + + L L+RA V + + G +
Sbjct: 69 QQIQTMAAKLASTGLTHARMDGHTDNYGEDSYNEVLSLKRANVVADAWAMGGQIPRSNLT 128
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
GK+ P A+NRR V +
Sbjct: 129 TQGLGKKYPIASNKTAQGRAENRRVAVVIS 158
>gi|84394351|ref|ZP_00993072.1| flagellar motor protein [Vibrio splendidus 12B01]
gi|84375010|gb|EAP91936.1| flagellar motor protein [Vibrio splendidus 12B01]
Length = 315
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 45/128 (35%), Gaps = 5/128 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ +L +Q + + F + S ++P ++ + ++ I GH D
Sbjct: 173 QGAIEVENLGQQIVIRIREKGAFPSGSAFLQPKFRPLVRQVAELVKDVPGIVRISGHTDN 232
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S+ L +RA +V RG S R++V P E + N
Sbjct: 233 QRLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRLRVRGMADTEPVEPNDTEWQRSLN 292
Query: 147 RRAIVFLK 154
RR + +
Sbjct: 293 RRVEISIM 300
>gi|323498631|ref|ZP_08103623.1| flagellar motor protein MotB [Vibrio sinaloensis DSM 21326]
gi|323316329|gb|EGA69348.1| flagellar motor protein MotB [Vibrio sinaloensis DSM 21326]
Length = 314
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 45/128 (35%), Gaps = 5/128 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ +L +Q + + F S ++P ++ + ++ + GH D
Sbjct: 172 QGAIEVENLGQQIDIRIREKGAFPEGSAFLQPKFRPLVRQIAELVKDIPGIIRVSGHTDN 231
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S+ L +RA +V RG + R++V P E ++N
Sbjct: 232 QRIESELYRSNWDLSAQRAVSVAQEMEKVRGFTPQRLRVRGMADTEPLGPNDTEAQRSRN 291
Query: 147 RRAIVFLK 154
RR + +
Sbjct: 292 RRVEISIM 299
>gi|189346280|ref|YP_001942809.1| peptidoglycan-associated lipoprotein [Chlorobium limicola DSM 245]
gi|189340427|gb|ACD89830.1| peptidoglycan-associated lipoprotein [Chlorobium limicola DSM 245]
Length = 169
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 15/169 (8%)
Query: 1 MQY-STIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQ-------------EQFSS 46
M+ +I++ I S + + S D+ + +++ +
Sbjct: 1 MKTGIKGLVIIAMIATAGCSSKSAVTSADSGADSSSSMQGGSSSGSVSSSGSYGFDEWQT 60
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRR 105
VFFD S + L+ +WL+ + +IEGH D+ G+ +IALG RR
Sbjct: 61 GPLGDVFFDYDSSILATEAQNRLTQNAAWLKSNAGKSVVIEGHCDDRGTSEYNIALGERR 120
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
A + G+SASR++ +YG+E P G +E+A+AKNRRA +K
Sbjct: 121 AVTAKEFIARLGVSASRLETVTYGEERPFDKGQNEEAWAKNRRAHFVVK 169
>gi|172064633|ref|YP_001812283.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6]
gi|171998118|gb|ACB69034.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6]
Length = 248
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 40/110 (36%), Gaps = 1/110 (0%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGL 103
++ F ++ P + L+ L + I G+ D GS + L
Sbjct: 136 QINLAGDALFAPGQATLTPEARKSLNALMEQQQGTFFSRVTIIGYTDATGSAALNDVLSQ 195
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RRA AV +Y RG+ ++V G AKNRR + L
Sbjct: 196 RRAQAVASYLRTRGLKYDVIEVEGRGSAQSVASNETAQGRAKNRRVEIQL 245
>gi|260777706|ref|ZP_05886599.1| protein F-related protein [Vibrio coralliilyticus ATCC BAA-450]
gi|260605719|gb|EEX32004.1| protein F-related protein [Vibrio coralliilyticus ATCC BAA-450]
Length = 205
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALG 102
+ D++ F+T S ++P + L +G +L D +I+GHAD G+ + +L
Sbjct: 90 IMVKLTDTIKFNTGSSMVKPDSMYWLDMMGRYLATQPGIDIVIDGHADSTGAPTFNDSLS 149
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
++RA AV V+ ++ + + YG+ +P+ A NRR V
Sbjct: 150 MKRAKAVKKQLVSNNVAMNSIYTRGYGEYVPACSNTTSAGKACNRRVEV 198
>gi|289803197|ref|ZP_06533826.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 128
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/123 (38%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHA 89
+ E + + + V+FD Y IR +L ++L + +EGHA
Sbjct: 5 GNMSSEEQARLQMQQLQQNNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHA 64
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
DE G+ +I+LG RRA AV Y +G+SA ++ + SYGKE P+V GHDE AYAKNRRA
Sbjct: 65 DERGTPEYNISLGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDEAAYAKNRRA 124
Query: 150 IVF 152
++
Sbjct: 125 VLV 127
>gi|254428548|ref|ZP_05042255.1| peptidoglycan-associated lipoprotein, putative [Alcanivorax sp.
DG881]
gi|196194717|gb|EDX89676.1| peptidoglycan-associated lipoprotein, putative [Alcanivorax sp.
DG881]
Length = 190
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/104 (32%), Positives = 63/104 (60%), Gaps = 1/104 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAY 107
++F S ++ A + L ++L+ + + +EGHADE G+R ++AL RR+
Sbjct: 80 SRVIYFAFDSNTVPAAAFETLRAHATYLKNNANAKIRLEGHADERGTREYNVALSERRSK 139
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
AV + +G+++S++++ SYG+E P+ +GH E +AKNRR +
Sbjct: 140 AVEKFLRVQGVASSQLEIVSYGEEKPAAFGHGEMDWAKNRRVEI 183
>gi|183598397|ref|ZP_02959890.1| hypothetical protein PROSTU_01791 [Providencia stuartii ATCC 25827]
gi|188020575|gb|EDU58615.1| hypothetical protein PROSTU_01791 [Providencia stuartii ATCC 25827]
Length = 357
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 65/147 (44%), Gaps = 12/147 (8%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEK 78
+ + P V+ + + E ++ V F+ + +++P Q L+ L + ++
Sbjct: 202 NQEAAPVVEPAPVVEPAPVVENKRFTLRSDVLFNFNKATLKPEGQQALNELYNELSSIDP 261
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VY 136
L+ G D +GS+N ++ L +RA +V +Y VA+G+ AS + GKE P
Sbjct: 262 TQGRVLVVGFTDRIGSQNYNLPLSQKRAQSVVDYLVAKGVPASAIAAEGRGKEDPVTGNK 321
Query: 137 GHDEDAYAK-------NRRAIVFLKGC 156
+ A +RR + ++G
Sbjct: 322 CDNVKGRAALIECLAPDRRVEIEIQGT 348
>gi|85703482|ref|ZP_01034586.1| OmpA domain protein [Roseovarius sp. 217]
gi|85672410|gb|EAQ27267.1| OmpA domain protein [Roseovarius sp. 217]
Length = 635
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 48/137 (35%), Gaps = 3/137 (2%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVG--DSVFFDTSSYSIRPADIQVLSNLGSWLE 77
ID K P L E + + + F+ S +I ++ ++ L+
Sbjct: 463 SIDVTYKKALDPVAGLPTPDECEAQIAEIQSTRKINFEPGSATIDAQGAAIMDDIADILK 522
Query: 78 KH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ +I GH D G + L L RA AV + R + S + YG+ P
Sbjct: 523 DCGEIPMVIGGHTDSQGREEMNEQLSLARARAVLDELRLRRVLTSSIDAKGYGESTPIAD 582
Query: 137 GHDEDAYAKNRRAIVFL 153
E NRR L
Sbjct: 583 NETEAGRETNRRIEFRL 599
>gi|117619075|ref|YP_857151.1| sodium-type flagellar protein MotY [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117560482|gb|ABK37430.1| sodium-type flagellar protein MotY [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 287
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYAVFN 111
+D +S + A + L+ +G +++ +I+ ++D G R + L +RA A+
Sbjct: 180 YDKNSDELSLASKRRLAMIGEYVKVDKSIDVVVIDAYSDSYGGRWPNQKLSEKRADAIKK 239
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
F+ GI ++ V +G++ ED AKNRR ++
Sbjct: 240 VFMDLGIEPGKISVEGHGEKQHIASNETEDGRAKNRRVVI 279
>gi|90418921|ref|ZP_01226832.1| flagellar motor protein [Aurantimonas manganoxydans SI85-9A1]
gi|90337001|gb|EAS50706.1| flagellar motor protein [Aurantimonas manganoxydans SI85-9A1]
Length = 342
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 45/118 (38%), Gaps = 12/118 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGS--------WLEKHDCDFLIEGHADELGS----R 95
V F + S ++ A ++ L + ++GH D +
Sbjct: 222 FQSEVLFPSGSDVLQEAGTDEMAKLAEAIVALNREIPSDINWIIRVDGHTDNVPISGGRF 281
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA AV Y +++G+ R+ T +G+ P + +A A+NRR L
Sbjct: 282 EDNWELSTERAGAVVKYLISQGVPPERLAATGFGEYQPIDPDNTPEARARNRRIEFKL 339
>gi|262198258|ref|YP_003269467.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
gi|262081605|gb|ACY17574.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
Length = 533
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 55/138 (39%), Gaps = 4/138 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSS-SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
D + P+ + + ++ FDT ++ P + +L+ +
Sbjct: 394 DEPVAATTRPEPEYKPEVADTGRAVFTKPVTINFDTGQSALDPESMHLLNTQVLPQLEMA 453
Query: 81 --CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
IEG+ D +G + + AL RA +V +Y V +GI+A R+ G + P
Sbjct: 454 GGMYVRIEGNTDNVGDKRGNQALSEARAQSVLDYLVQKGINAKRLSARGNGSDSPVASNK 513
Query: 139 DEDAYAKNRRAIVF-LKG 155
D A NRR + + G
Sbjct: 514 TADGRAANRRTDIVFISG 531
>gi|167614763|ref|ZP_02383398.1| unnamed protein product; Similar to putative exported protein
[Burkholderia thailandensis Bt4]
Length = 560
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 44/114 (38%), Gaps = 2/114 (1%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHADELGSRNSSI 99
E + + F T + P Q + + LI GH+D GS ++
Sbjct: 432 ESTAMQLDTVTLFATGQATFSPGAAQRELQHALRMILANPEQRVLIVGHSDSAGSDAVNL 491
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA A+ ++FV +G+ +R V G P A+NRR + L
Sbjct: 492 QLSKARARAIRDWFVDQGVLKTRFIVQGAGDTHPVADNASPLGRAQNRRVEILL 545
>gi|78061495|ref|YP_371403.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383]
gi|77969380|gb|ABB10759.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
Length = 169
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 1/118 (0%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRN 96
Q+ F + FD Y+++P +++ +G L + + G++D+ G
Sbjct: 50 QETQQGFEFGSTGPILFDFDRYNLKPDVRRIVERIGRTLRSAGINGVRVYGYSDQEGVDK 109
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ L RRA V V G+ R+ + GK P A+NRRA + +
Sbjct: 110 YDLELSRRRAEVVALELVDVGLDTKRIAIVGKGKSDPVGDNKTPGGRAQNRRAAIVVS 167
>gi|329944219|ref|ZP_08292478.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386]
gi|328530949|gb|EGF57805.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386]
Length = 464
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/153 (20%), Positives = 59/153 (38%), Gaps = 10/153 (6%)
Query: 15 MMSISGIDNLDTKI-------SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQ 67
+++ + +D D S D + ++ + +V V F+ S +
Sbjct: 137 VLAKAELDEADPGPFAMNSIILSADGSSDTKKNEKSTTVTVDGDVTFEVDSDQLSAQADA 196
Query: 68 VLSNLGSWLEKHDC--DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMK 124
VL+N+ ++K+ D I GH D++ + L RRA AV + +
Sbjct: 197 VLANVVEQIKKYPSGGDLTITGHTDDVADDAHNQDLSERRAKAVSSRLKKLTDLSTWNES 256
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
V+ G+ P V ++ NRR + L +
Sbjct: 257 VSGKGESSPRVPNDSDEHRQANRRVEITLTPSK 289
>gi|288927544|ref|ZP_06421391.1| lipoprotein PG3 [Prevotella sp. oral taxon 317 str. F0108]
gi|288330378|gb|EFC68962.1| lipoprotein PG3 [Prevotella sp. oral taxon 317 str. F0108]
Length = 225
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 53/138 (38%), Gaps = 2/138 (1%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDC 81
+ ++ + +++ + + + F T+ ++ + L+ E DC
Sbjct: 77 TAEQVKNAKVEEVTDANGLKAVKVTFDSGILFATNKATLNQSSKNELAKFSQVLKENRDC 136
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDE 140
I GH D G+ +I L RA +V NY G+ S+ + V G P
Sbjct: 137 HVDIYGHTDNTGNDGINIPLSNSRAQSVVNYLANCGVPRSQFQKVEGKGSSDPVASNSTA 196
Query: 141 DAYAKNRRAIVFLKGCRA 158
+NRR V+L +A
Sbjct: 197 SGRQQNRRVEVYLYASKA 214
>gi|254182964|ref|ZP_04889557.1| OmpA family protein [Burkholderia pseudomallei 1655]
gi|184213498|gb|EDU10541.1| OmpA family protein [Burkholderia pseudomallei 1655]
Length = 558
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 45/123 (36%), Gaps = 2/123 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHAD 90
+ +S + + F + P Q + + LI GHAD
Sbjct: 421 DTVLDSPRTASIAMQLDTVSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHAD 480
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS ++ L RA A+ ++FV +G+ +R V G P A+NRR
Sbjct: 481 SSGSDAANFQLSEARARAIRDWFVDQGVLKTRFIVQGAGDTHPIADNDSPSGRAQNRRVE 540
Query: 151 VFL 153
V L
Sbjct: 541 VLL 543
>gi|148979919|ref|ZP_01815777.1| outer membrane protein [Vibrionales bacterium SWAT-3]
gi|145961523|gb|EDK26825.1| outer membrane protein [Vibrionales bacterium SWAT-3]
Length = 221
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
V E + Q + + + FD+ SY++ + L + +E D +IEGH D
Sbjct: 95 SGVQVERVGENQLLLRLENGIGFDSGSYALESSIHNTLRGVARILVEYPDTSLVIEGHTD 154
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS +++ L RRA +V + +++ ++A R G+ P + A NRR
Sbjct: 155 STGSESTNQILSERRAESVRAFLISQDVAAGRAIARGNGERYPLCDNNTSRGRACNRRVE 214
Query: 151 VFL 153
+ +
Sbjct: 215 IQI 217
>gi|329849877|ref|ZP_08264723.1| ompA family protein [Asticcacaulis biprosthecum C19]
gi|328841788|gb|EGF91358.1| ompA family protein [Asticcacaulis biprosthecum C19]
Length = 254
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 52/135 (38%), Gaps = 2/135 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
T ++ E ++ + F + S + +L ++ + ++
Sbjct: 112 AATQTAVTEQVLQAAEDCTDRVTAAVADRRLQFISGSAELTGDSQAILIDIYNTIQTCPQ 171
Query: 82 DF--LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ +EG+ D +G N ++ L RA A + G++ + + YG + P
Sbjct: 172 NLALSVEGYTDNVGQDNDNMKLSTARAEAAAFALIDLGLAQASVSSRGYGAQNPIADNTS 231
Query: 140 EDAYAKNRRAIVFLK 154
ED A+NRR L+
Sbjct: 232 EDGRARNRRVDFILR 246
>gi|285018158|ref|YP_003375869.1| flagellar motor protein [Xanthomonas albilineans GPE PC73]
gi|283473376|emb|CBA15881.1| probable flagellar motor protein [Xanthomonas albilineans]
Length = 317
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 43/114 (37%), Gaps = 4/114 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ + F + S ++ + L+ L L +EG+ D S+
Sbjct: 152 IEVEINSDILFGSGSATLDQSAHATLAQLAQILASVPNGVRVEGYTDNTPIATAQFPSNW 211
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V + F +G+ SR+ + YG+ P NRR ++ +
Sbjct: 212 ELSAARAASVVHLFADQGLQPSRLSMIGYGQFRPHASNDTASGRNANRRVVLVI 265
>gi|254299760|ref|ZP_04967209.1| OmpA family protein [Burkholderia pseudomallei 406e]
gi|157809397|gb|EDO86567.1| OmpA family protein [Burkholderia pseudomallei 406e]
Length = 558
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 45/123 (36%), Gaps = 2/123 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHAD 90
+ +S + + F + P Q + + LI GHAD
Sbjct: 421 DTVLDSPRTASIAMQLDTVSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHAD 480
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS ++ L RA A+ ++FV +G+ +R V G P A+NRR
Sbjct: 481 SSGSDAANFQLSEARARAIRDWFVDQGVLKTRFIVQGAGDTHPIADNDSPSGRAQNRRVE 540
Query: 151 VFL 153
V L
Sbjct: 541 VLL 543
>gi|84514795|ref|ZP_01002158.1| flagellar MotB protein [Loktanella vestfoldensis SKA53]
gi|84510954|gb|EAQ07408.1| flagellar MotB protein [Loktanella vestfoldensis SKA53]
Length = 411
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 20/146 (13%), Positives = 46/146 (31%), Gaps = 6/146 (4%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
+ + + ++ + ++G F + S + ++ L +
Sbjct: 263 ALEAEAQLRANLQDEIDQGLVTVEQRDGKVFVNLGAGGAFPSGSADLTLQARGIIDELAA 322
Query: 75 WLEKHDCDFLIEGHADELGS-----RNSSIALGLRRAYAVFNYFVARGISASR-MKVTSY 128
++ GH D + + L RA +V A + R M S+
Sbjct: 323 VTVDPTSKVVVSGHTDNVPISFGALYRDNWDLAAARAASVVQEIEASIPAPGREMSAISF 382
Query: 129 GKEMPSVYGHDEDAYAKNRRAIVFLK 154
G+ P + +NRR + ++
Sbjct: 383 GETKPVADNATAEGRERNRRIELEIE 408
>gi|304384331|ref|ZP_07366742.1| lipoprotein PG3 [Prevotella marshii DSM 16973]
gi|304334647|gb|EFM00929.1| lipoprotein PG3 [Prevotella marshii DSM 16973]
Length = 226
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 51/134 (38%), Gaps = 2/134 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
++ + + + + + + F + + L N + + D
Sbjct: 77 QTQAQVQNAKVEEVTDVNGLKAVKVTFDSGILFALNKAELNATSKNELMNFSNVLKKNTD 136
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHD 139
C I+G+ D G+ + ++ L RA AV +Y G+ S+ K V YG P
Sbjct: 137 CQVDIQGYTDSTGNDDINLPLSNSRAQAVVSYLAQCGVPYSQFKNVKGYGSSNPVADNST 196
Query: 140 EDAYAKNRRAIVFL 153
E +NRR V++
Sbjct: 197 EAGRKQNRRVEVYI 210
>gi|262402450|ref|ZP_06079011.1| outer membrane protein [Vibrio sp. RC586]
gi|262351232|gb|EEZ00365.1| outer membrane protein [Vibrio sp. RC586]
Length = 223
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSI 99
+ Q + + + F +SSY + + L + +E D +IEGH D GS ++
Sbjct: 106 ENQLMLRMENGIGFTSSSYQLDSYIHKTLRGVARILVEYPDTSLVIEGHTDSTGSDTTNQ 165
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L +RA +V + +++G++A R G+ P + A NRR + +
Sbjct: 166 VLSEKRAESVRAFLLSQGVAAGRAIARGNGERFPLCSNSTAEGRACNRRVEIQI 219
>gi|217423098|ref|ZP_03454600.1| OmpA family protein [Burkholderia pseudomallei 576]
gi|217394006|gb|EEC34026.1| OmpA family protein [Burkholderia pseudomallei 576]
Length = 558
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 45/123 (36%), Gaps = 2/123 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHAD 90
+ +S + + F + P Q + + LI GHAD
Sbjct: 421 DTVLDSPRTASIAMQLDTVSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHAD 480
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS ++ L RA A+ ++FV +G+ +R V G P A+NRR
Sbjct: 481 SSGSDAANFQLSEARARAIRDWFVDQGVLKTRFIVQGAGDTHPIADNDSPSGRAQNRRVE 540
Query: 151 VFL 153
V L
Sbjct: 541 VLL 543
>gi|206564258|ref|YP_002235021.1| putative outer membrane protein A precursor [Burkholderia
cenocepacia J2315]
gi|198040298|emb|CAR56283.1| putative outer membrane protein A precursor [Burkholderia
cenocepacia J2315]
Length = 220
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 46/110 (41%), Gaps = 1/110 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNSSIALGLR 104
++ F T ++ P + L L ++ + G D +GS + ++AL R
Sbjct: 110 VNLSGDALFATDHATLAPTARESLDRLLSERADRTYSQVTVTGFTDSVGSDDYNLALSKR 169
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RA +V Y A G+ M V+ GK P + A NRR + L+
Sbjct: 170 RAESVAAYLKAHGLKTDSMTVSGRGKADPVASNATPEGRASNRRVEIRLQ 219
>gi|325068010|ref|ZP_08126683.1| OmpA/MotB domain protein [Actinomyces oris K20]
Length = 411
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 49/148 (33%), Gaps = 3/148 (2%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
+++ ++ S D + + + + ++ V F + S + L +
Sbjct: 79 TTLAASAPIERYTRSLDDSTSTHTGGKDITVTLASDVTFASDSADLASGAETQLQTVVGQ 138
Query: 76 --LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEM 132
I GH D++ + L +RA AV + V+ G+
Sbjct: 139 LGQYPDGGTLTIVGHTDDVQDDAYNQTLSEKRANAVKTRLEQLTKLDKWQTSVSGKGESQ 198
Query: 133 PSVYGHDEDAYAKNRRAIVFLKGCRANT 160
P + + A A NRR + L T
Sbjct: 199 PKINDTTDQARAANRRVEITLTPTSGTT 226
>gi|315180895|gb|ADT87809.1| sodium-driven polar flagellar protein [Vibrio furnissii NCTC 11218]
Length = 320
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 45/128 (35%), Gaps = 5/128 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ +L +Q + + F S ++P ++ + ++ + GH D
Sbjct: 174 QGAIEVENLGQQIVIRIREKGAFPEGSAFLQPKFRPLVRQIADLVKDVPGIVRVSGHTDN 233
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S+ L +RA +V +G + R++V P E ++N
Sbjct: 234 QRLDSELYRSNWDLSAQRAVSVAQEMEKVKGFNHQRLQVRGMADTDPLGPNDTEAQRSRN 293
Query: 147 RRAIVFLK 154
RR + +
Sbjct: 294 RRVEISIM 301
>gi|303248999|ref|ZP_07335244.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ]
gi|302489585|gb|EFL49525.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ]
Length = 317
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 51/124 (41%), Gaps = 10/124 (8%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNS--- 97
+ ++ + FFD +S I+PA + +L ++ + L +EGH D L +
Sbjct: 192 ENGVELNLRGAAFFDLASAEIKPAALPLLRDIAATLSGTPYKVTVEGHTDNLPIESWLYP 251
Query: 98 -SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY------AKNRRAI 150
+ L RA V + + G+ + ++V P DE AKNRR +
Sbjct: 252 SNWELSSARASRVARFLIDGGVPRNHLRVEGLADTQPVAPNDDEAGRPIPENQAKNRRVV 311
Query: 151 VFLK 154
+ +
Sbjct: 312 ILVS 315
>gi|237751977|ref|ZP_04582457.1| lipoprotein [Helicobacter winghamensis ATCC BAA-430]
gi|229376544|gb|EEO26635.1| lipoprotein [Helicobacter winghamensis ATCC BAA-430]
Length = 167
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/164 (21%), Positives = 70/164 (42%), Gaps = 12/164 (7%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFS---------SSVGDS 51
M+ + L+A +++ + + + N Q+ F+ + +
Sbjct: 1 MKKFLVLSSLAAALLVTGCSQKSGVDSSADVNQGKNYVGGQDNFATVEERINYVENQLQN 60
Query: 52 VFFDTSSYSIRPADIQVLSN---LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
+FFD + +R + N + + IEG+ DE G+ + ALGL+RA A
Sbjct: 61 IFFDFDKFVVRADMQNAIDNDASVLTSSAMGPLTVRIEGNTDEWGTDEYNYALGLKRAVA 120
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
V +A+G+ S+ + SYG+ P+ ++ +A+NR+
Sbjct: 121 VKEALIAKGVEESKTVLVSYGESKPTCTAKTKECWAENRKVTFK 164
>gi|114799158|ref|YP_761149.1| OmpA family protein [Hyphomonas neptunium ATCC 15444]
gi|114739332|gb|ABI77457.1| OmpA family protein [Hyphomonas neptunium ATCC 15444]
Length = 297
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 47/118 (39%), Gaps = 1/118 (0%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
E + + + + + F + S + L+ L S+ ++ + I GH D G+
Sbjct: 178 EQTKTDLGVTLILRDLQFASGSALLTSGAQGRLAPLASYLSKQPESRIQIAGHTDSQGAE 237
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RRA +V Y + G+ + R+ G+ P A NRR + +
Sbjct: 238 AYNQDLSARRAASVGTYLASTGVDSGRINTIGLGESTPLSSNDTAAGRAINRRVEITI 295
>gi|56461234|ref|YP_156515.1| flagellar motor protein MotB [Idiomarina loihiensis L2TR]
gi|56180244|gb|AAV82966.1| Flagellar motor protein [Idiomarina loihiensis L2TR]
Length = 312
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 46/122 (37%), Gaps = 5/122 (4%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG----SRNS 97
+Q + + F S ++P ++ + L+ + I GH+D +S
Sbjct: 181 QQIIIRIREQGSFPEGSAFLQPQFRPIIQQVAGALKDIPGEVTISGHSDNEKLVSEIYSS 240
Query: 98 SIALGLRRAYAVFN-YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
L +RA AV S R+ V Y P V + E+ +NRR + +
Sbjct: 241 DWDLSSKRAVAVAEEMLKVDDFSEDRLVVMGYSDTKPLVPNNSEENRKRNRRVEISIMQG 300
Query: 157 RA 158
+A
Sbjct: 301 KA 302
>gi|242313779|ref|ZP_04812796.1| OmpA family protein [Burkholderia pseudomallei 1106b]
gi|242137018|gb|EES23421.1| OmpA family protein [Burkholderia pseudomallei 1106b]
Length = 558
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 45/123 (36%), Gaps = 2/123 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHAD 90
+ +S + + F + P Q + + LI GHAD
Sbjct: 421 DTVLDSPRTASIAMQLDTVSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHAD 480
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS ++ L RA A+ ++FV +G+ +R V G P A+NRR
Sbjct: 481 SSGSDAANFQLSEARARAIRDWFVDQGVLKTRFIVQGAGDTHPIADNDSPSGRAQNRRVE 540
Query: 151 VFL 153
V L
Sbjct: 541 VLL 543
>gi|167896642|ref|ZP_02484044.1| OmpA family membrane protein [Burkholderia pseudomallei 7894]
Length = 541
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 45/123 (36%), Gaps = 2/123 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHAD 90
+ +S + + F + P Q + + LI GHAD
Sbjct: 404 DTVLDSPRTASIAMQLDTVSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHAD 463
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS ++ L RA A+ ++FV +G+ +R V G P A+NRR
Sbjct: 464 SSGSDAANFQLSEARARAIRDWFVDQGVLKTRFIVQGAGDTHPIADNDSPSGRAQNRRVE 523
Query: 151 VFL 153
V L
Sbjct: 524 VLL 526
>gi|189347858|ref|YP_001944387.1| OmpA/MotB domain protein [Chlorobium limicola DSM 245]
gi|189342005|gb|ACD91408.1| OmpA/MotB domain protein [Chlorobium limicola DSM 245]
Length = 416
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 1/102 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYA 108
D + FDT +++P + + N+ L+ G+ D +G +++ L RA A
Sbjct: 309 DRLVFDTGKATLKPESQEQIGNINEILKAFSAVSLKFGGYTDNVGDPQANLRLSKDRAEA 368
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
V V GI +R+ YG E P E+ KNRR
Sbjct: 369 VMTEIVKLGIDKARLDAEGYGAEHPVADNATEEGRQKNRRVD 410
>gi|260767264|ref|ZP_05876205.1| Flagellar motor rotation protein MotB [Vibrio furnissii CIP 102972]
gi|260617772|gb|EEX42950.1| Flagellar motor rotation protein MotB [Vibrio furnissii CIP 102972]
Length = 320
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 45/128 (35%), Gaps = 5/128 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ +L +Q + + F S ++P ++ + ++ + GH D
Sbjct: 174 QGAIEVENLGQQIVIRIREKGAFPEGSAFLQPKFRPLVRQIADLVKDVPGIVRVSGHTDN 233
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S+ L +RA +V +G + R++V P E ++N
Sbjct: 234 QRLDSELYRSNWDLSAQRAVSVAQEMEKVKGFNHQRLQVRGMADTDPLGPNDTEAQRSRN 293
Query: 147 RRAIVFLK 154
RR + +
Sbjct: 294 RRVEISIM 301
>gi|226198818|ref|ZP_03794382.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9]
gi|225929258|gb|EEH25281.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9]
Length = 558
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 45/123 (36%), Gaps = 2/123 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHAD 90
+ +S + + F + P Q + + LI GHAD
Sbjct: 421 DTVLDSPRTASIAMQLDTVSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHAD 480
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS ++ L RA A+ ++FV +G+ +R V G P A+NRR
Sbjct: 481 SSGSDAANFQLSEARARAIRDWFVDQGVLKTRFIVQGAGDTHPIADNDSPSGRAQNRRVE 540
Query: 151 VFL 153
V L
Sbjct: 541 VLL 543
>gi|188996771|ref|YP_001931022.1| OmpA/MotB domain protein [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931838|gb|ACD66468.1| OmpA/MotB domain protein [Sulfurihydrogenibium sp. YO3AOP1]
Length = 264
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 7/132 (5%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ ++ + + D + F S I ++L+ + +++ +EGH D+
Sbjct: 100 EGKVSVEVIPMGVRIRILDYILFPPCSTEINQEYKELLNGIAEVIKEAKLPVEVEGHTDD 159
Query: 92 L-----GSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAK 145
+ S+ L RA AV Y + G + Y P + E
Sbjct: 160 IPPGPTCIYPSNWELSASRAAAVVRYLITAGNLPPYLFSAVGYADTKPISPNNSELGRKL 219
Query: 146 NRRAIV-FLKGC 156
NRR + + G
Sbjct: 220 NRRIEINLITGT 231
>gi|53721134|ref|YP_110119.1| OmpA family protein [Burkholderia pseudomallei K96243]
gi|52211548|emb|CAH37542.1| OmpA family membrane protein [Burkholderia pseudomallei K96243]
Length = 558
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 45/123 (36%), Gaps = 2/123 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHAD 90
+ +S + + F + P Q + + LI GHAD
Sbjct: 421 DTVLDSPRTASIAMQLDTVSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHAD 480
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS ++ L RA A+ ++FV +G+ +R V G P A+NRR
Sbjct: 481 SSGSDAANFQLSEARARAIRDWFVDQGVLKTRFIVQGAGDTHPIADNDSPSGRAQNRRVE 540
Query: 151 VFL 153
V L
Sbjct: 541 VLL 543
>gi|93005138|ref|YP_579575.1| OmpA/MotB [Psychrobacter cryohalolentis K5]
gi|92392816|gb|ABE74091.1| OmpA/MotB [Psychrobacter cryohalolentis K5]
Length = 533
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 52/133 (39%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHD 80
D+L ++ D + ++ + V F+ I A+ +L + + +
Sbjct: 350 DSLTASEAAMDNLGQNPDPRDVARALSLQVVNFEVDKAVIPDANKALLDRAVKLMEQVPN 409
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+I GH D+ ++ L RA A+ Y VA+G+ S++ G+ P +
Sbjct: 410 MTLMIIGHTDKTADAAYNLKLSEERAQAMKAYLVAQGVDPSKLMTKGMGETDPIADNTTD 469
Query: 141 DAYAKNRRAIVFL 153
+NRR +
Sbjct: 470 QGRFRNRRIEFVV 482
>gi|320095395|ref|ZP_08027074.1| outer membrane protein [Actinomyces sp. oral taxon 178 str. F0338]
gi|319977666|gb|EFW09330.1| outer membrane protein [Actinomyces sp. oral taxon 178 str. F0338]
Length = 402
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/154 (17%), Positives = 48/154 (31%), Gaps = 13/154 (8%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFS-----SSVGDSVFFDTSSYSIRPADI 66
+++ I + ++ D V FD ++R
Sbjct: 247 GTALVNGKSIKADPVPAVGSIGSFPPVGSLKPVESCGTTITLQDGVLFDFGESAVRADAA 306
Query: 67 QVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
L+ L S L + GH D + + L +RA AV + G +AS +
Sbjct: 307 DTLAKLASVLADAKVPAAHVYGHTDSISDEAFNQTLSEQRAKAVVDELKKNGATAS-LDW 365
Query: 126 TSYGKEMPSVYG------HDEDAYAKNRRAIVFL 153
+G+ P + NRR +F+
Sbjct: 366 QGFGETKPVAPNTNDDGTDNPAGRQANRRVEIFI 399
>gi|262368251|ref|ZP_06061580.1| inner membrane lipoprotein yiaD [Acinetobacter johnsonii SH046]
gi|262315929|gb|EEY96967.1| inner membrane lipoprotein yiaD [Acinetobacter johnsonii SH046]
Length = 254
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
+ F++ S + + Q+L + + I GH D G ++AL RA
Sbjct: 148 NRIIEFESGSAVLAVSGTQILDEMAVALNKVGGKKVKIIGHTDSSGDVAKNLALSKERAV 207
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV NY + + I+A R+ V G P D KNRR +
Sbjct: 208 AVKNYLINKSIAAERLSVEGLGSNKPVADNATADGRKKNRRIEFDV 253
>gi|261210647|ref|ZP_05924939.1| outer membrane protein [Vibrio sp. RC341]
gi|260840132|gb|EEX66712.1| outer membrane protein [Vibrio sp. RC341]
Length = 223
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSI 99
+ Q + + + F +SSY + + L + +E D +IEGH D GS ++
Sbjct: 106 ENQLLLRMENGIGFTSSSYQLDSYIHKTLRGVARILVEYPDTSLVIEGHTDSTGSDTTNQ 165
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L +RA +V + +A+G++A R G+ P + A NRR + +
Sbjct: 166 VLSEKRAESVRAFLLAQGVAAGRAIARGNGERFPLCSNSTAEGRACNRRVEIQI 219
>gi|269796387|ref|YP_003315842.1| flagellar motor protein [Sanguibacter keddieii DSM 10542]
gi|269098572|gb|ACZ23008.1| flagellar motor protein [Sanguibacter keddieii DSM 10542]
Length = 295
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 50/144 (34%), Gaps = 4/144 (2%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSS-VGDSVFFDTSSYSIRPADIQVLSNL 72
+ ++ + + V+ + + D VFF + S + P V+ +
Sbjct: 131 SFAELAEKIDTALAAGGMEGVVQFRIDERGLVIGMITDEVFFASESAVLTPTSQAVVDTM 190
Query: 73 GSWLEKHDCDFLIEGHADELGSRNS--SIALGLRRAYAVFNYFVARG-ISASRMKVTSYG 129
++ + IEGHAD + + + L RA V V + +R+ YG
Sbjct: 191 TPFMLPLPNEISIEGHADSVPTARYASNWELSSDRATQVLRRMVEADGMPPTRISAVGYG 250
Query: 130 KEMPSVYGHDEDAYAKNRRAIVFL 153
P + NRR + +
Sbjct: 251 DSRPLQPNETAEGLTANRRVDLVV 274
>gi|308066932|ref|YP_003868537.1| chemotaxis motB protein (Motility protein B) [Paenibacillus
polymyxa E681]
gi|305856211|gb|ADM67999.1| Chemotaxis motB protein (Motility protein B) [Paenibacillus
polymyxa E681]
Length = 275
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 49/133 (36%), Gaps = 6/133 (4%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLI 85
+ + +LN Q Q ++ D+ F + ++P ++ ++ S + D ++
Sbjct: 123 QNNGLTPLLNTKLNQSQLMITISDNALFSSGQAEVKPEARKLAKSISSMLQQFPGYDVIV 182
Query: 86 EGHADELGSRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
GH D + NS R + + + ++ YG+ P D
Sbjct: 183 SGHTDNVPISNSQFPSNFDLSAKRSLNFLRILLLNPDLDPTKFVSIGYGEYRPLASNQDG 242
Query: 141 DAYAKNRRAIVFL 153
+KNRR + +
Sbjct: 243 QGRSKNRRVEISV 255
>gi|262376393|ref|ZP_06069622.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
gi|262308532|gb|EEY89666.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
Length = 255
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 43/106 (40%), Gaps = 1/106 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
+ F++ S + + IQ+L + + + I GH D G N ++ L +RA
Sbjct: 149 NRIIEFESGSAVLATSGIQILDEMVSALNKVSGKKIRIIGHTDSSGDINKNLMLSQQRAE 208
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV +Y +A+ + + G P D +NRR +
Sbjct: 209 AVKSYLIAKNVPTHLLSTKGSGSSKPVADNATADGRKRNRRIEFEV 254
>gi|254195556|ref|ZP_04901984.1| OmpA family protein [Burkholderia pseudomallei S13]
gi|169652303|gb|EDS84996.1| OmpA family protein [Burkholderia pseudomallei S13]
Length = 558
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 45/123 (36%), Gaps = 2/123 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHAD 90
+ +S + + F + P Q + + LI GHAD
Sbjct: 421 DTVLDSPRTASIAMQLDTVSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHAD 480
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS ++ L RA A+ ++FV +G+ +R V G P A+NRR
Sbjct: 481 SSGSDAANFQLSEARARAIRDWFVDQGVLKTRFIVQGAGDTHPIADNDSPSGRAQNRRVE 540
Query: 151 VFL 153
V L
Sbjct: 541 VLL 543
>gi|148976605|ref|ZP_01813292.1| flagellar motor protein MotB [Vibrionales bacterium SWAT-3]
gi|145963956|gb|EDK29214.1| flagellar motor protein MotB [Vibrionales bacterium SWAT-3]
Length = 315
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 45/128 (35%), Gaps = 5/128 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ +L +Q + + F + S ++P ++ + ++ I GH D
Sbjct: 173 QGAIEVENLGQQIVIRIREKGAFPSGSAFLQPKFRPLVRQVAELVKDVPGIVRISGHTDN 232
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S+ L +RA +V RG S R++V P E + N
Sbjct: 233 QRLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRLRVRGMADTEPVEPNDTEWQRSLN 292
Query: 147 RRAIVFLK 154
RR + +
Sbjct: 293 RRVEISIM 300
>gi|323494859|ref|ZP_08099951.1| OmpA family protein [Vibrio brasiliensis LMG 20546]
gi|323310823|gb|EGA63995.1| OmpA family protein [Vibrio brasiliensis LMG 20546]
Length = 296
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/161 (24%), Positives = 70/161 (43%), Gaps = 7/161 (4%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTK------ISSPDTVLNESSLQEQFSSSVGDSVFF 54
M+ +T+ +I A+ + + S + + + L + + + + F
Sbjct: 1 MKLNTLLVIGMALGLTACSTDTYVSKENIDKFGDPQVEKFLIRECIVPERDIRIAMASHF 60
Query: 55 DTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
D ++ D Q + L + + K I GH D GS + ++ L LRRA AV Y
Sbjct: 61 DFDKSELKEQDKQSIDQLMASIGKLHGQISIVGHTDYQGSDDYNVKLSLRRAEAVKAYMQ 120
Query: 115 ARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
++ ++ +V YG+ P V G + A A+NRRA V +
Sbjct: 121 SKLDASRYDWEVKYYGESKPLVEGVSKQANAENRRAYVIFE 161
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 51/130 (39%), Gaps = 1/130 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI 85
+ + + + + V + FD + PAD L S L + LI
Sbjct: 161 EQTQTQQENIFCEPPEPERKVYVAMTSHFDFDKAQLNPADKASLDEFASNLTGLNGRVLI 220
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYA 144
GH D GS + + L RA +V Y + + +V S+G+ P D DA A
Sbjct: 221 AGHTDYQGSISYNEKLAQLRAESVMQYLQTKLDPSQFVWEVKSFGELNPVTQEQDLDANA 280
Query: 145 KNRRAIVFLK 154
NRRA V K
Sbjct: 281 LNRRAFVVFK 290
>gi|315110066|gb|EFT82042.1| OmpA family protein [Propionibacterium acnes HL030PA2]
Length = 120
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 44/117 (37%), Gaps = 2/117 (1%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW--LEKHDCDFLIEGHADELGSRNS 97
+E + SV FD S ++PA Q++ K + G+ D GS +
Sbjct: 2 TKESMKIDLDASVLFDLDSDVVKPAGRQIIDRTAKQLVARKVSGKIEVTGYTDSSGSASH 61
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
++ L RRA +V ++ + G+ P E NRR + +K
Sbjct: 62 NLDLSRRRAASVAKVLGSQLSKGITLVTAGKGEADPVTSNDSEAGRRLNRRVTITVK 118
>gi|167913324|ref|ZP_02500415.1| OmpA family membrane protein [Burkholderia pseudomallei 112]
Length = 542
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 45/123 (36%), Gaps = 2/123 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHAD 90
+ +S + + F + P Q + + LI GHAD
Sbjct: 405 DTVLDSPRTASIAMQLDTVSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHAD 464
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS ++ L RA A+ ++FV +G+ +R V G P A+NRR
Sbjct: 465 SSGSDAANFQLSEARARAIRDWFVDQGVLKTRFIVQGAGDTHPIADNDSPSGRAQNRRVE 524
Query: 151 VFL 153
V L
Sbjct: 525 VLL 527
>gi|167818176|ref|ZP_02449856.1| OmpA family membrane protein [Burkholderia pseudomallei 91]
Length = 541
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 45/123 (36%), Gaps = 2/123 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHAD 90
+ +S + + F + P Q + + LI GHAD
Sbjct: 404 DTVLDSPRTASIAMQLDTVSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHAD 463
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS ++ L RA A+ ++FV +G+ +R V G P A+NRR
Sbjct: 464 SSGSDAANFQLSEARARAIRDWFVDQGVLKTRFIVQGAGDTHPIADNDSPSGRAQNRRVE 523
Query: 151 VFL 153
V L
Sbjct: 524 VLL 526
>gi|114561780|ref|YP_749293.1| OmpA/MotB domain-containing protein [Shewanella frigidimarina NCIMB
400]
gi|114333073|gb|ABI70455.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400]
Length = 479
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIALGLRRAYA 108
D + F S + P ++ + +L+ H + GH+D+ GS+ + L +RA A
Sbjct: 369 DGLLFKYDSDELLPEAYPIVEVVAQYLQTHPKQLFYVVGHSDDQGSQAYNQTLSEKRATA 428
Query: 109 VFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ + + + +++ G+ P DE +NRR + ++
Sbjct: 429 IKTRLIKQFSISAQQVEAKGVGEYSPIANNLDEAGQKQNRRVELVIR 475
>gi|238797993|ref|ZP_04641483.1| Type VI secretion system OmpA/MotB family protein [Yersinia
mollaretii ATCC 43969]
gi|238718198|gb|EEQ10024.1| Type VI secretion system OmpA/MotB family protein [Yersinia
mollaretii ATCC 43969]
Length = 446
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 46/124 (37%), Gaps = 5/124 (4%)
Query: 34 VLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG 93
V + + GD++F S +RP + V+ + + + LI GH D +
Sbjct: 322 VSVDETTSRSKVIFRGDTMF-QVGSDKVRPEIVNVIERVAQEVHRVKGAVLIVGHTDSMP 380
Query: 94 SRNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
L +RA V + GI +++ G P D ++NRR
Sbjct: 381 INKPGYPNNQVLSEKRAANVARFMEKAGIPTGKIRFEGKGDTQPVSRNDDAAGRSQNRRV 440
Query: 150 IVFL 153
+F+
Sbjct: 441 EIFV 444
>gi|197116693|ref|YP_002137120.1| OmpA family outer membrane lipoprotein [Geobacter bemidjiensis Bem]
gi|197086053|gb|ACH37324.1| OmpA family outer membrane lipoprotein [Geobacter bemidjiensis Bem]
Length = 204
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 1/132 (0%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDC 81
+ ++ + + + ++++FD S + L+ NL K
Sbjct: 71 SSESIPPQSQQSVAGKAQAGASQADALETIYFDFDSSLLSDTARATLAANLEKLKAKPGA 130
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
IEG+ DE GS + ++AL RRA + Y A G AS++ V YG+E P+V G E+
Sbjct: 131 ALRIEGNTDERGSDDYNLALSERRAQSAKKYLQALGFPASKLSVVGYGEEKPAVKGEGEE 190
Query: 142 AYAKNRRAIVFL 153
+AKNRR +
Sbjct: 191 IWAKNRRDEFVI 202
>gi|126456220|ref|YP_001074174.1| OmpA family protein [Burkholderia pseudomallei 1106a]
gi|126229988|gb|ABN93401.1| OmpA family protein [Burkholderia pseudomallei 1106a]
Length = 542
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 45/123 (36%), Gaps = 2/123 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHAD 90
+ +S + + F + P Q + + LI GHAD
Sbjct: 405 DTVLDSPRTASIAMQLDTVSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHAD 464
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS ++ L RA A+ ++FV +G+ +R V G P A+NRR
Sbjct: 465 SSGSDAANFQLSEARARAIRDWFVDQGVLKTRFIVQGAGDTHPIADNDSPSGRAQNRRVE 524
Query: 151 VFL 153
V L
Sbjct: 525 VLL 527
>gi|238020123|ref|ZP_04600549.1| hypothetical protein VEIDISOL_02007 [Veillonella dispar ATCC 17748]
gi|237863647|gb|EEP64937.1| hypothetical protein VEIDISOL_02007 [Veillonella dispar ATCC 17748]
Length = 366
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 47/127 (37%), Gaps = 1/127 (0%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIE 86
+P V+ + S++FD+ R L+ + + + +
Sbjct: 238 TPAPAPVVEAPVYKTPKLDYYVQSIYFDSDQDVARADQYPNLTAAVNAANQYSQDQIKLL 297
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
G+AD + ++ L RR V Y V G+SA R + G P A+N
Sbjct: 298 GNADTDATPQYNVGLSERRVQYVAQYLVNNGVSADRFIGIANGDTKPVATNSTAAGKAEN 357
Query: 147 RRAIVFL 153
RR V++
Sbjct: 358 RRVDVYI 364
>gi|254488269|ref|ZP_05101474.1| OmpA domain protein [Roseobacter sp. GAI101]
gi|214045138|gb|EEB85776.1| OmpA domain protein [Roseobacter sp. GAI101]
Length = 632
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 45/120 (37%), Gaps = 1/120 (0%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELG 93
E + + F+ S +I + + + + L+ D I+G+ D G
Sbjct: 479 TPEECEAQIGEVVKAGKINFEPGSATIDASALSTMDQIAEILKPCGDIALEIQGYTDSQG 538
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++AL RA +V N AR + + +G+E P E+ NRR L
Sbjct: 539 REEMNLALSQSRAQSVLNELRARRVLTASFVAKGFGEEAPVESNDTEEGREANRRIEFRL 598
>gi|68164502|gb|AAY87231.1| predicted flagellar motor protein [uncultured bacterium BAC17H8]
Length = 385
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 44/119 (36%), Gaps = 6/119 (5%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG-----SR 95
+++ +VG F + S + A +++ + E + + GH D++
Sbjct: 265 EDKVIITVGAGGAFPSGSAELTEAARKIMEEIAGVNEAGSGEITVSGHTDDVPLIFGSQF 324
Query: 96 NSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA +V G RM+ S+G+ P A NRR + +
Sbjct: 325 RDNWDLAAARAASVVQALEDTGKVPAGRMQAVSFGESQPVESNDTARGRATNRRIEIEI 383
>gi|330998481|ref|ZP_08322305.1| OmpA family protein [Paraprevotella xylaniphila YIT 11841]
gi|329568587|gb|EGG50392.1| OmpA family protein [Paraprevotella xylaniphila YIT 11841]
Length = 292
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 6/114 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD----ELGSRNSSIA 100
S+ D++ + + SY I + LS + ++ + + LIEG+ D + ++
Sbjct: 156 ISLADNMLYKSGSYEISERAGETLSKIAKIIMDYKEYEVLIEGNTDTDPISRPNIRNNWD 215
Query: 101 LGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V G+ R+ G+ P + +NRR + +
Sbjct: 216 LSTLRASSVVQALQNTYGVDPKRLTAAGRGEYNPVASNDTPEGKMRNRRTQIII 269
>gi|167722027|ref|ZP_02405263.1| OmpA family membrane protein [Burkholderia pseudomallei DM98]
Length = 531
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 45/123 (36%), Gaps = 2/123 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHAD 90
+ +S + + F + P Q + + LI GHAD
Sbjct: 394 DTVLDSPRTASIAMQLDTVSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHAD 453
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS ++ L RA A+ ++FV +G+ +R V G P A+NRR
Sbjct: 454 SSGSDAANFQLSEARARAIRDWFVDQGVLKTRFIVQGAGDTHPIADNDSPSGRAQNRRVE 513
Query: 151 VFL 153
V L
Sbjct: 514 VLL 516
>gi|148652125|ref|YP_001279218.1| OmpA/MotB domain-containing protein [Psychrobacter sp. PRwf-1]
gi|148571209|gb|ABQ93268.1| OmpA/MotB domain protein [Psychrobacter sp. PRwf-1]
Length = 537
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 50/133 (37%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHD 80
++ ++ D + ++ + + F I + VL + + D
Sbjct: 366 QSIADATTAMDNLGENPDPKDVARALSLQVINFAVDKTDIPAENQAVLDRAVEVMKQVPD 425
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
LI GH D G + L RRA AV Y V++G A+++ G+ P E
Sbjct: 426 MQLLILGHTDSDGDDAYNKDLSQRRAEAVKAYLVSKGADAAKLMTKGMGETDPIATNETE 485
Query: 141 DAYAKNRRAIVFL 153
+ +NRR +
Sbjct: 486 NGKFRNRRIEFTV 498
>gi|167848084|ref|ZP_02473592.1| OmpA family protein [Burkholderia pseudomallei B7210]
Length = 531
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 45/123 (36%), Gaps = 2/123 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHAD 90
+ +S + + F + P Q + + LI GHAD
Sbjct: 394 DTVLDSPRTASIAMQLDTVSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHAD 453
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS ++ L RA A+ ++FV +G+ +R V G P A+NRR
Sbjct: 454 SSGSDAANFQLSEARARAIRDWFVDQGVLKTRFIVQGAGDTHPIADNDSPSGRAQNRRVE 513
Query: 151 VFL 153
V L
Sbjct: 514 VLL 516
>gi|226952046|ref|ZP_03822510.1| OmpA/MotB domain protein [Acinetobacter sp. ATCC 27244]
gi|226837203|gb|EEH69586.1| OmpA/MotB domain protein [Acinetobacter sp. ATCC 27244]
Length = 255
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 48/117 (41%), Gaps = 2/117 (1%)
Query: 39 SLQEQFSSSVGDSVF-FDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRN 96
+ Q+ ++ D + F++ S + A ++L + + I GH D G +
Sbjct: 138 AEQKVIDDALKDRIIEFESGSAILTEAGKRILDEMAVALNKVGGKQVKIIGHTDSSGDAS 197
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L RA AV +Y V++ I+ R+ G P D KNRR +
Sbjct: 198 RNVILSKERAVAVQDYLVSKNIATDRLSTEGKGSSEPIADNATADGRRKNRRIEFEV 254
>gi|310639572|ref|YP_003944330.1| ompa/motb domain-containing protein [Paenibacillus polymyxa SC2]
gi|309244522|gb|ADO54089.1| OmpA/MotB domain-containing protein [Paenibacillus polymyxa SC2]
Length = 275
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 49/133 (36%), Gaps = 6/133 (4%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLI 85
+ + T+LN Q Q ++ D+ F + ++P ++ ++ S + D ++
Sbjct: 123 QNNGLSTLLNTKLNQSQLMITISDNALFSSGQAEVKPEARKLAKSISSMLQQFPGYDVIV 182
Query: 86 EGHADELGSRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
GH D + NS R + + + ++ YG+ P
Sbjct: 183 SGHTDNVPISNSQFPSNFDLSAKRSLNFLRILLLNPQLDPTKFVSIGYGEYRPLAGNQTG 242
Query: 141 DAYAKNRRAIVFL 153
AKNRR + +
Sbjct: 243 AGRAKNRRVEISV 255
>gi|297202083|ref|ZP_06919480.1| type VI secretion system OmpA/MotB [Streptomyces sviceus ATCC
29083]
gi|197714277|gb|EDY58311.1| type VI secretion system OmpA/MotB [Streptomyces sviceus ATCC
29083]
Length = 210
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 45/140 (32%), Gaps = 2/140 (1%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
++ + ++ + ++ V F S + +S +
Sbjct: 64 ATLAEPKVLDIKQVVEDQTGDERREDTNADVKFALQAEVLFGKDSAKLNGDARARISAIA 123
Query: 74 SWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKE 131
+ ++ + + G D LGS L +RA AV + S +V Y ++
Sbjct: 124 AEIKNQNATRIRVFGFTDNLGSYAHGRTLSRQRANAVQDVLDQELKDSGITYEVRGYSED 183
Query: 132 MPSVYGHDEDAYAKNRRAIV 151
P E KNRR V
Sbjct: 184 FPIASNATEAGRKKNRRVEV 203
>gi|302342669|ref|YP_003807198.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075]
gi|301639282|gb|ADK84604.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075]
Length = 244
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 51/132 (38%), Gaps = 5/132 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
D V+ ++ V + F+T S I P + VL + ++GH D
Sbjct: 112 DDVVEVIDQGDKVILRVKGQLLFNTGSSDINPQALGVLKAIADVVDRNPGWRLDVKGHTD 171
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S+ L RA AV Y + +G+S SR+ T Y V E+ A+N
Sbjct: 172 SRPISSVKFASNWELSSLRATAVLRYLIEQGVSPSRLTATGYADTQRLVPDSSEENMARN 231
Query: 147 RRAIVFLKGCRA 158
RR L+ +
Sbjct: 232 RRVEFVLEKQKG 243
>gi|223038721|ref|ZP_03609014.1| Omp18 [Campylobacter rectus RM3267]
gi|222880123|gb|EEF15211.1| Omp18 [Campylobacter rectus RM3267]
Length = 189
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 66/130 (50%), Gaps = 6/130 (4%)
Query: 30 SPDTVLNESSLQEQFSSSVG---DSVFFDTSSYSIRPADIQVLSNLG---SWLEKHDCDF 83
S D ++++S +Q SS+ +V+FD ++I+ V++ + E
Sbjct: 58 SSDNMMSDSERLQQLISSIEGQVQTVYFDFDKFNIKGDMQPVINTNAGLFNQSEAQALSV 117
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
IEG+ DE G+ + ALGL+RA A + V +G++A R+ V SYG+ P +
Sbjct: 118 KIEGNCDEWGTDEYNYALGLKRAKAAKDALVKQGVAADRIMVVSYGESNPVCTDKTKACD 177
Query: 144 AKNRRAIVFL 153
A+NRRA +
Sbjct: 178 AQNRRAEFKV 187
>gi|149201621|ref|ZP_01878595.1| flagellar MotB protein [Roseovarius sp. TM1035]
gi|149144669|gb|EDM32698.1| flagellar MotB protein [Roseovarius sp. TM1035]
Length = 383
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 53/149 (35%), Gaps = 6/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS 70
SA + + + + +++ +++ +VG+ F + + V++
Sbjct: 233 SARSAAIADAQLQVALQQEIGEGLVSVEQREDKVVITVGEGGAFPSGGADLTDEARDVMA 292
Query: 71 NLGSWLEKHDCDFLIEGHADELG-----SRNSSIALGLRRAYAVFNYFV-ARGISASRMK 124
L + ++ GH D + + L RA +V + I R+
Sbjct: 293 RLAFAAMGEASEIVVTGHTDSVPLGGASPYRDNWGLAAARASSVVRELSGSGLIEPERLT 352
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
TS G+ +P A+NRR + +
Sbjct: 353 ATSRGESLPVAENDTAAGRAQNRRIEIEI 381
>gi|319779140|ref|YP_004130053.1| 18K peptidoglycan-associated outer membrane lipoprotein [Taylorella
equigenitalis MCE9]
gi|317109164|gb|ADU91910.1| 18K peptidoglycan-associated outer membrane lipoprotein [Taylorella
equigenitalis MCE9]
Length = 166
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 59/104 (56%), Gaps = 1/104 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAY 107
SV+F SY++ P +++ +L + +EG+ D GS ++ALG RR+
Sbjct: 59 NKSVYFAFDSYTVEPEYNEMIQMHAKYLSSNPTRTVRVEGNTDLRGSSEYNLALGQRRSV 118
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
AV G+++++++ S+GKE P G+ E+A+A+NRRA +
Sbjct: 119 AVARLLNQYGVNSAQLEAVSFGKERPQATGNSEEAHAQNRRADI 162
>gi|294624487|ref|ZP_06703170.1| OmpA family outer membrane lipoprotein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292601217|gb|EFF45271.1| OmpA family outer membrane lipoprotein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 400
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 45/123 (36%), Gaps = 7/123 (5%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRN 96
+ ++ D + FD IR +VL L + + D + GH D GS +
Sbjct: 278 PGTPCGYLITLNDRILFDFDKSDIRADAARVLDTLGAALTKVTAKDMQVRGHTDAKGSDD 337
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG-----HDEDAYAKNRRAIV 151
+ AL RRA AV + +A G+ P + NRR +
Sbjct: 338 YNQALSERRANAVLAA-LRARGAAQSANAKGDGESQPVAPNTVNRQDNPGGRQLNRRVEI 396
Query: 152 FLK 154
FL+
Sbjct: 397 FLR 399
>gi|116327025|ref|YP_796745.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
L550]
gi|116332316|ref|YP_802034.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
JB197]
gi|116119769|gb|ABJ77812.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
L550]
gi|116126005|gb|ABJ77276.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
JB197]
Length = 667
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 2/110 (1%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYA 108
+++FF++ S+ I P L+ L ++++ IEGH D +G + ++ L +RA A
Sbjct: 558 NNLFFESKSFRIIPESEPELNRLAEIMKENPDIKIQIEGHTDNVGKKKDNLLLSEKRAIA 617
Query: 109 VFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
+ Y + + R+K +G P E+ KNRR + +
Sbjct: 618 IAEYLSQKHSIPTERIKTRGFGDNFPLSKNDSEEGRRKNRRVNFTILKSK 667
>gi|260869286|ref|YP_003235688.1| putative outer membrane lipoprotein [Escherichia coli O111:H- str.
11128]
gi|257765642|dbj|BAI37137.1| predicted outer membrane lipoprotein [Escherichia coli O111:H- str.
11128]
Length = 160
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 54/149 (36%), Gaps = 3/149 (2%)
Query: 8 IILSAITMMSISGIDNL-DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADI 66
+I +++ + + + + +S + D++ F + Y + P
Sbjct: 9 LIFTSLILTGCQSPQGKFTPEQVAAMQSYGFTESAGDWSLGLSDAILFAKNDYKLLPESQ 68
Query: 67 QVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMK 124
Q + + + L ++GH D G + + L L+RA V + + G +
Sbjct: 69 QQIQTMAAKLASTGLTHAHMDGHTDNYGEDSYNEGLSLKRANVVADAWAMGGQIPRSNLT 128
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
GK+ P A+NRR V +
Sbjct: 129 TQGLGKKYPIASNKTAQGRAENRRVAVVI 157
>gi|255013830|ref|ZP_05285956.1| outer membrane lipoprotein [Bacteroides sp. 2_1_7]
Length = 435
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+ FD +I+P + ++ + + D F +EGH D G+ S+ L R+ A+
Sbjct: 332 ITFDVGKSTIKPESMGEINRIVKLMTDNPDLRFSVEGHTDSTGNEASNQTLSEARSNAIV 391
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
V GISA R+ + G+ P ++ AKNRR
Sbjct: 392 GKLVELGISADRLSASGKGQSSPIADNGTDEGRAKNRRVEFV 433
>gi|167826566|ref|ZP_02458037.1| OmpA family membrane protein [Burkholderia pseudomallei 9]
Length = 531
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 45/123 (36%), Gaps = 2/123 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHAD 90
+ +S + + F + P Q + + LI GHAD
Sbjct: 394 DTVLDSPRTASIAMQLDTVSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHAD 453
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS ++ L RA A+ ++FV +G+ +R V G P A+NRR
Sbjct: 454 SSGSDAANFQLSEARARAIRDWFVDQGVLKTRFIVQGAGDTHPIADNDSPSGRAQNRRVE 513
Query: 151 VFL 153
V L
Sbjct: 514 VLL 516
>gi|167578218|ref|ZP_02371092.1| OmpA family domain protein [Burkholderia thailandensis TXDOH]
Length = 333
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 45/138 (32%), Gaps = 7/138 (5%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSV-----FFDTSSYSIRPADIQVLSNLGSW- 75
+ ++ K V S Q + V +FDT ++P L +
Sbjct: 194 EVVEVKPMQTGQVKVVDSSAMQKGLAATGKVALYGLYFDTDKAQVKPESKAQLDEMAKLL 253
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPS 134
+ I GH D G ++ L +RA AV I+ R+ P
Sbjct: 254 TANPNLKVYIVGHTDNQGQFAHNVDLSQKRADAVAQTLATTYRIAPGRLVAKGVASLSPV 313
Query: 135 VYGHDEDAYAKNRRAIVF 152
DE A+NRR +
Sbjct: 314 ASNGDEAGRAQNRRVELV 331
>gi|322435021|ref|YP_004217233.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
gi|321162748|gb|ADW68453.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
Length = 255
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 22/143 (15%), Positives = 50/143 (34%), Gaps = 3/143 (2%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
+ K ++ + + S+ ++ FF + S +RP + VL + + L +
Sbjct: 107 VKAQVEKKQLTSDAVSVRATGDGLVVSLREAGFFASGSADVRPEALAVLQTVAAALPRQS 166
Query: 81 CDFLIEGHADELGSRNS--SIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYG 137
+ + + L RA + +A+ + +++ + P
Sbjct: 167 MRVEGHTDNIPIHTTQFATNWELSTARAATITRLLIAQNAVDPAQVSAAGDAEFRPIADN 226
Query: 138 HDEDAYAKNRRAIVFLKGCRANT 160
+ A+NRR + L A T
Sbjct: 227 ATDAGRAQNRRVDIILLKAAAPT 249
>gi|320577122|gb|ADW54070.1| outer membrane protein A [Sodalis glossinidius]
Length = 358
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 53/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ +++P Q L L S ++ D ++ G+ D +G+ + L
Sbjct: 228 TLKSDVLFNFDKATLKPEGQQALDQLYSQLSSMDPKDGSVVVLGYTDRIGTEQYNQKLSQ 287
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RA +V +Y V++GI + ++ GK P + A +RR + +K
Sbjct: 288 ERAQSVVSYLVSKGIPSDKISARGMGKSNPVTGNTCNSVKGRAAVISCLAPDRRVEIEVK 347
Query: 155 GCR 157
G +
Sbjct: 348 GIK 350
>gi|161520167|ref|YP_001583594.1| OmpA/MotB domain-containing protein [Burkholderia multivorans ATCC
17616]
gi|160344217|gb|ABX17302.1| OmpA/MotB domain protein [Burkholderia multivorans ATCC 17616]
Length = 185
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 55/151 (36%), Gaps = 5/151 (3%)
Query: 9 ILSAITMMSISGID----NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPA 64
L + + + L + ++ F + FD Y+++P
Sbjct: 33 TLLGVLLSAGCHTAPPHRGLTETQVTTLKSAGFKETEQGFEFGAAGPILFDFDRYNLKPD 92
Query: 65 DIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
+++ +G L D + G+ D+ G+ + L RRA V V G+ A R+
Sbjct: 93 VRRIVERIGRTLHSAGIDGVRVYGYTDDEGTDGYDLELSRRRAEVVAIELVDVGLDARRI 152
Query: 124 KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ GK P A+NRRA + +
Sbjct: 153 AIVGRGKHDPVGDNRMPVGRAQNRRAAIVVS 183
>gi|85059008|ref|YP_454710.1| outer membrane protein A [Sodalis glossinidius str. 'morsitans']
gi|84779528|dbj|BAE74305.1| outer membrane protein A precursor [Sodalis glossinidius str.
'morsitans']
Length = 356
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 53/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ +++P Q L L S ++ D ++ G+ D +G+ + L
Sbjct: 226 TLKSDVLFNFDKATLKPEGQQALDQLYSQLSSMDPKDGSVVVLGYTDRIGTEQYNQKLSQ 285
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RA +V +Y V++GI + ++ GK P + A +RR + +K
Sbjct: 286 ERAQSVVSYLVSKGIPSDKISARGMGKSNPVTGNTCNSVKGRAAVISCLAPDRRVEIEVK 345
Query: 155 GCR 157
G +
Sbjct: 346 GIK 348
>gi|326798576|ref|YP_004316395.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
gi|326549340|gb|ADZ77725.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
Length = 462
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 47/102 (46%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
++ F+ S ++ + L + S L +EG+A E G+ + LGL RA +V
Sbjct: 360 NIQFEFDSSVLKTSSYPTLDQVSSDLRASGATLTLEGNASEEGTTEYNYQLGLDRANSVK 419
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
NY V G++AS++ V S G+ P E+ NR
Sbjct: 420 NYLVNSGVAASQINVVSNGETKPVASNATEEGRQLNRNVQFK 461
>gi|319952716|ref|YP_004163983.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
gi|319421376|gb|ADV48485.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
Length = 337
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 63/143 (44%), Gaps = 3/143 (2%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS 70
SA + + +++ + I +P +S + + + + + FDT +++P +++
Sbjct: 195 SARAEIGVVALESFNQTIKAPTASEMKSDIDKTGKAILN--INFDTDKATLKPDGETLVA 252
Query: 71 NLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
+ + E IEGH D G+ + L + RA V +GI+ +R+ +G
Sbjct: 253 EIFTLLNENDSLKLSIEGHTDSSGNVERNKQLSMDRANTVLYTLAGKGIAINRLTAKGFG 312
Query: 130 KEMPSVYGHDEDAYAKNRRAIVF 152
+ P E+ AKNRR +
Sbjct: 313 AKNPISPNDSEENKAKNRRVELV 335
>gi|312959441|ref|ZP_07773958.1| OmpA/MotB [Pseudomonas fluorescens WH6]
gi|311286158|gb|EFQ64722.1| OmpA/MotB [Pseudomonas fluorescens WH6]
Length = 231
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 53/133 (39%), Gaps = 3/133 (2%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK--HDC 81
+ +P E + + V V F S ++ AD L + + L++
Sbjct: 97 ANGCPPAPPAAAVEEMAVVKEETIVIRDVHFQFDSANLTTADKTTLDTIAARLKQEAPSA 156
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDE 140
+ GH D +G+ + L +RA++V Y ++R +S + V G+ P
Sbjct: 157 QLRVSGHTDSVGADAYNQKLSQKRAHSVTEYLISRGVPRSSFVSVVGAGESQPVADNKTA 216
Query: 141 DAYAKNRRAIVFL 153
+ A NRR + +
Sbjct: 217 EGRALNRRTQIQI 229
>gi|256420785|ref|YP_003121438.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
gi|256035693|gb|ACU59237.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
Length = 586
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 51/134 (38%), Gaps = 8/134 (5%)
Query: 28 ISSPDTVLNESSLQEQFSSSVG-DSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLI 85
+P L ++ L ++++ ++++ + + + PA L + + + I
Sbjct: 450 AVTPPPTLADTILNAPVNTAITMQEIYYEVNEFILTPASHPALDKLVALLKDHPQMEIEI 509
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG------HD 139
H D GS + L +RA Y V +GI R++ YG P +
Sbjct: 510 SAHTDNTGSAAYNQQLSEKRALNCVAYLVDKGIDKKRLQYKGYGATKPVAPNTNPDGTDN 569
Query: 140 EDAYAKNRRAIVFL 153
+ NRR + +
Sbjct: 570 PEGRRLNRRIELRI 583
>gi|104780438|ref|YP_606936.1| OmpA family outer membrane protein [Pseudomonas entomophila L48]
gi|95109425|emb|CAK14126.1| putative outer membrane protein, OmpA family [Pseudomonas
entomophila L48]
Length = 230
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 3/108 (2%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEK--HDCDFLIEGHADELGSRNSSIALGLRRAY 107
V F+ S + D + L+ + + L+K + GH D +GS + L RA
Sbjct: 122 RDVRFEFDSARLTANDKERLNTIATRLKKEAPSARLSVTGHTDSVGSDKYNQKLSEARAR 181
Query: 108 AVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+V Y V AS + V G+ P D A NRR + ++
Sbjct: 182 SVVEYLVESGVPRASFVSVVGAGETQPVADNATADGRAMNRRTEIKIQ 229
>gi|16130526|ref|NP_417096.1| probable positive effector of YfiN activity, OM lipoprotein
[Escherichia coli str. K-12 substr. MG1655]
gi|89109406|ref|AP_003186.1| predicted outer membrane lipoprotein [Escherichia coli str. K-12
substr. W3110]
gi|170082209|ref|YP_001731529.1| outer membrane lipoprotein [Escherichia coli str. K-12 substr.
DH10B]
gi|238901765|ref|YP_002927561.1| putative outer membrane lipoprotein [Escherichia coli BW2952]
gi|254037681|ref|ZP_04871739.1| outer membrane lipoprotein [Escherichia sp. 1_1_43]
gi|256024868|ref|ZP_05438733.1| putative outer membrane lipoprotein [Escherichia sp. 4_1_40B]
gi|300949000|ref|ZP_07163053.1| OmpA family protein [Escherichia coli MS 116-1]
gi|300957389|ref|ZP_07169603.1| OmpA family protein [Escherichia coli MS 175-1]
gi|301644047|ref|ZP_07244063.1| OmpA family protein [Escherichia coli MS 146-1]
gi|307139326|ref|ZP_07498682.1| putative outer membrane lipoprotein [Escherichia coli H736]
gi|331643321|ref|ZP_08344452.1| YfiB [Escherichia coli H736]
gi|140651|sp|P07021|YFIB_ECOLI RecName: Full=Putative lipoprotein yfiB; Flags: Precursor
gi|1788957|gb|AAC75654.1| probable positive effector of YfiN activity, OM lipoprotein
[Escherichia coli str. K-12 substr. MG1655]
gi|1800010|dbj|BAA16490.1| predicted outer membrane lipoprotein [Escherichia coli str. K12
substr. W3110]
gi|169890044|gb|ACB03751.1| predicted outer membrane lipoprotein [Escherichia coli str. K-12
substr. DH10B]
gi|226839305|gb|EEH71326.1| outer membrane lipoprotein [Escherichia sp. 1_1_43]
gi|238862713|gb|ACR64711.1| predicted outer membrane lipoprotein [Escherichia coli BW2952]
gi|260448321|gb|ACX38743.1| OmpA/MotB domain protein [Escherichia coli DH1]
gi|300315824|gb|EFJ65608.1| OmpA family protein [Escherichia coli MS 175-1]
gi|300451527|gb|EFK15147.1| OmpA family protein [Escherichia coli MS 116-1]
gi|301077592|gb|EFK92398.1| OmpA family protein [Escherichia coli MS 146-1]
gi|309702985|emb|CBJ02316.1| outer membrane lipoprotein [Escherichia coli ETEC H10407]
gi|315137223|dbj|BAJ44382.1| putative outer membrane lipoprotein [Escherichia coli DH1]
gi|331036792|gb|EGI09016.1| YfiB [Escherichia coli H736]
Length = 160
Score = 72.1 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 54/149 (36%), Gaps = 3/149 (2%)
Query: 8 IILSAITMMSISGIDNL-DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADI 66
++ +++ + + + + +S + D++ F + Y + P
Sbjct: 9 LVFTSLILTGCQSPQGKFTPEQVAAMQSYGFTESAGDWSLGLSDAILFAKNDYKLLPESQ 68
Query: 67 QVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMK 124
Q + + + L ++GH D G + + L L+RA V + + G +
Sbjct: 69 QQIQTMAAKLASTGLTHARMDGHTDNYGEDSYNEGLSLKRANVVADAWAMGGQIPRSNLT 128
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
GK+ P A+NRR V +
Sbjct: 129 TQGLGKKYPIASNKTAQGRAENRRVAVVI 157
>gi|262165460|ref|ZP_06033197.1| outer membrane protein [Vibrio mimicus VM223]
gi|262025176|gb|EEY43844.1| outer membrane protein [Vibrio mimicus VM223]
Length = 193
Score = 72.1 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSI 99
+ Q + + + F +SSY + + L + + D +IEGH D GS ++
Sbjct: 76 ENQLMLRMENGIGFTSSSYQLDSYIHKTLRGVARILVAYPDTSLVIEGHTDSTGSDTTNQ 135
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L +RA +V + +++G++A R G+ P + A NRR + +
Sbjct: 136 VLSEKRAESVRAFLLSQGVAAGRAIARGNGERFPLCSNSTAEGRACNRRVEIQI 189
>gi|166711089|ref|ZP_02242296.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 264
Score = 72.1 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 2/134 (1%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVF-FDTSSYSIRPADIQVLS-NLGSWLEKHD 80
+T + +++ S Q ++G+ + F + S + P +++L + + D
Sbjct: 131 ASNTSYTVTNSLKLGGSEQGVLDQTLGNRIIEFQSGSSRLTPLGMRILDEMVEKMSQMKD 190
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
FLI GH D +G R S++AL RA AV +Y V +GI +RM V G + P
Sbjct: 191 ARFLIIGHTDNVGQRESNLALSQARAQAVKDYIVQKGIDGARMNVQGKGPDQPVADNASP 250
Query: 141 DAYAKNRRAIVFLK 154
D A+NRR ++
Sbjct: 251 DGRARNRRIQFKIQ 264
>gi|26248968|ref|NP_755008.1| putative outer membrane lipoprotein [Escherichia coli CFT073]
gi|91211939|ref|YP_541925.1| putative outer membrane lipoprotein [Escherichia coli UTI89]
gi|110642766|ref|YP_670496.1| putative outer membrane lipoprotein [Escherichia coli 536]
gi|117624826|ref|YP_853739.1| putative outer membrane lipoprotein [Escherichia coli APEC O1]
gi|191174577|ref|ZP_03036072.1| OmpA family protein [Escherichia coli F11]
gi|218559525|ref|YP_002392438.1| outer membrane lipoprotein [Escherichia coli S88]
gi|227888171|ref|ZP_04005976.1| OmpA family protein [Escherichia coli 83972]
gi|237706807|ref|ZP_04537288.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|300986825|ref|ZP_07177814.1| OmpA family protein [Escherichia coli MS 45-1]
gi|300990725|ref|ZP_07179310.1| OmpA family protein [Escherichia coli MS 200-1]
gi|301050475|ref|ZP_07197354.1| OmpA family protein [Escherichia coli MS 185-1]
gi|306812477|ref|ZP_07446675.1| putative outer membrane lipoprotein [Escherichia coli NC101]
gi|331658753|ref|ZP_08359695.1| YfiB [Escherichia coli TA206]
gi|26109374|gb|AAN81576.1|AE016764_258 Putative lipoprotein yfiB precursor [Escherichia coli CFT073]
gi|91073513|gb|ABE08394.1| putative lipoprotein YfiB precursor [Escherichia coli UTI89]
gi|110344358|gb|ABG70595.1| putative lipoprotein YfiB precursor [Escherichia coli 536]
gi|115513950|gb|ABJ02025.1| putative outer membrane lipoprotein [Escherichia coli APEC O1]
gi|190905150|gb|EDV64794.1| OmpA family protein [Escherichia coli F11]
gi|218366294|emb|CAR04045.2| putative outer membrane lipoprotein [Escherichia coli S88]
gi|222034307|emb|CAP77048.1| lipoprotein yfiB [Escherichia coli LF82]
gi|226899847|gb|EEH86106.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|227834811|gb|EEJ45277.1| OmpA family protein [Escherichia coli 83972]
gi|281179651|dbj|BAI55981.1| conserved hypothetical protein [Escherichia coli SE15]
gi|294492477|gb|ADE91233.1| lipoprotein, OmpA family [Escherichia coli IHE3034]
gi|300297822|gb|EFJ54207.1| OmpA family protein [Escherichia coli MS 185-1]
gi|300305693|gb|EFJ60213.1| OmpA family protein [Escherichia coli MS 200-1]
gi|300407877|gb|EFJ91415.1| OmpA family protein [Escherichia coli MS 45-1]
gi|305854515|gb|EFM54953.1| putative outer membrane lipoprotein [Escherichia coli NC101]
gi|307554618|gb|ADN47393.1| putative lipoprotein YfiB precursor [Escherichia coli ABU 83972]
gi|307625845|gb|ADN70149.1| putative outer membrane lipoprotein [Escherichia coli UM146]
gi|312947177|gb|ADR28004.1| putative outer membrane lipoprotein [Escherichia coli O83:H1 str.
NRG 857C]
gi|315284819|gb|EFU44264.1| OmpA family protein [Escherichia coli MS 110-3]
gi|315290954|gb|EFU50319.1| OmpA family protein [Escherichia coli MS 153-1]
gi|323951196|gb|EGB47072.1| OmpA family protein [Escherichia coli H252]
gi|323957028|gb|EGB52754.1| OmpA family protein [Escherichia coli H263]
gi|324005821|gb|EGB75040.1| OmpA family protein [Escherichia coli MS 57-2]
gi|324012443|gb|EGB81662.1| OmpA family protein [Escherichia coli MS 60-1]
gi|331053335|gb|EGI25364.1| YfiB [Escherichia coli TA206]
Length = 160
Score = 72.1 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 54/149 (36%), Gaps = 3/149 (2%)
Query: 8 IILSAITMMSISGIDNL-DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADI 66
+I +++ + + + + +S + D++ F + Y + P
Sbjct: 9 LIFTSLILTGCQSPQGKFTPEQVAAMQSYGFTESAGDWSLGLSDAILFAKNDYKLLPESQ 68
Query: 67 QVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMK 124
Q + + + L ++GH D G + + L L+RA V + + G +
Sbjct: 69 QQIQTMAAKLASTGLTHARMDGHTDNYGEDSYNEVLSLKRANVVADAWAMGGQIPRSNLT 128
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
GK+ P A+NRR V +
Sbjct: 129 TQGLGKKYPIASNKTAQGRAENRRVAVVI 157
>gi|326336319|ref|ZP_08202490.1| outer membrane protein A [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325691493|gb|EGD33461.1| outer membrane protein A [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 666
Score = 72.1 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 6/110 (5%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYA 108
+ ++FD +IR L+ + +++H I+ H D GS ++AL RRA +
Sbjct: 554 EIIYFDFDKSNIRSDAEVDLAKIVEVMKEHPNIKIAIKSHTDSRGSDQYNLALSDRRAKS 613
Query: 109 VFNYFVARGISASRMKVTSYGKEMPS--VYGH---DEDAYAKNRRAIVFL 153
+ V +GI+ SR+ YG+ E+ + KNRR+ +
Sbjct: 614 TLEWIVKQGITRSRLTAKGYGETQLVNGCSNDVPCTEEEHQKNRRSEFII 663
>gi|167921266|ref|ZP_02508357.1| OmpA family protein [Burkholderia pseudomallei BCC215]
Length = 524
Score = 72.1 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 45/123 (36%), Gaps = 2/123 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHAD 90
+ +S + + F + P Q + + LI GHAD
Sbjct: 387 DTVLDSPRTASIAMQLDTVSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHAD 446
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS ++ L RA A+ ++FV +G+ +R V G P A+NRR
Sbjct: 447 SSGSDAANFQLSEARARAIRDWFVDQGVLKTRFIVQGAGDTHPIADNDSPSGRAQNRRVE 506
Query: 151 VFL 153
V L
Sbjct: 507 VLL 509
>gi|157158147|ref|YP_001463924.1| putative outer membrane lipoprotein [Escherichia coli E24377A]
gi|157162081|ref|YP_001459399.1| putative outer membrane lipoprotein [Escherichia coli HS]
gi|170019118|ref|YP_001724072.1| putative outer membrane lipoprotein [Escherichia coli ATCC 8739]
gi|188495277|ref|ZP_03002547.1| OmpA family protein [Escherichia coli 53638]
gi|194430167|ref|ZP_03062668.1| OmpA family protein [Escherichia coli B171]
gi|209920080|ref|YP_002294164.1| putative outer membrane lipoprotein [Escherichia coli SE11]
gi|218555184|ref|YP_002388097.1| putative outer membrane lipoprotein [Escherichia coli IAI1]
gi|218696229|ref|YP_002403896.1| putative outer membrane lipoprotein [Escherichia coli 55989]
gi|253772501|ref|YP_003035332.1| outer membrane lipoprotein [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254162575|ref|YP_003045683.1| putative outer membrane lipoprotein [Escherichia coli B str.
REL606]
gi|260845286|ref|YP_003223064.1| putative outer membrane lipoprotein [Escherichia coli O103:H2 str.
12009]
gi|260856694|ref|YP_003230585.1| putative outer membrane lipoprotein [Escherichia coli O26:H11 str.
11368]
gi|261227488|ref|ZP_05941769.1| predicted outer membrane lipoprotein [Escherichia coli O157:H7 str.
FRIK2000]
gi|261255682|ref|ZP_05948215.1| putative outer membrane lipoprotein [Escherichia coli O157:H7 str.
FRIK966]
gi|291283877|ref|YP_003500695.1| OmpA family protein [Escherichia coli O55:H7 str. CB9615]
gi|293415876|ref|ZP_06658516.1| lipoprotein yfiB [Escherichia coli B185]
gi|293448955|ref|ZP_06663376.1| lipoprotein yfiB [Escherichia coli B088]
gi|297517107|ref|ZP_06935493.1| putative outer membrane lipoprotein [Escherichia coli OP50]
gi|300819922|ref|ZP_07100105.1| OmpA family protein [Escherichia coli MS 107-1]
gi|300825119|ref|ZP_07105212.1| OmpA family protein [Escherichia coli MS 119-7]
gi|300905075|ref|ZP_07122884.1| OmpA family protein [Escherichia coli MS 84-1]
gi|300921149|ref|ZP_07137528.1| OmpA family protein [Escherichia coli MS 115-1]
gi|300925597|ref|ZP_07141467.1| OmpA family protein [Escherichia coli MS 182-1]
gi|300930670|ref|ZP_07146056.1| OmpA family protein [Escherichia coli MS 187-1]
gi|301305750|ref|ZP_07211837.1| OmpA family protein [Escherichia coli MS 124-1]
gi|301326724|ref|ZP_07220038.1| OmpA family protein [Escherichia coli MS 78-1]
gi|307315083|ref|ZP_07594667.1| OmpA/MotB domain protein [Escherichia coli W]
gi|309794116|ref|ZP_07688540.1| OmpA family protein [Escherichia coli MS 145-7]
gi|331654062|ref|ZP_08355062.1| YfiB [Escherichia coli M718]
gi|331669355|ref|ZP_08370201.1| YfiB [Escherichia coli TA271]
gi|331678596|ref|ZP_08379270.1| YfiB [Escherichia coli H591]
gi|157067761|gb|ABV07016.1| OmpA family protein [Escherichia coli HS]
gi|157080177|gb|ABV19885.1| OmpA family protein [Escherichia coli E24377A]
gi|169754046|gb|ACA76745.1| OmpA/MotB domain protein [Escherichia coli ATCC 8739]
gi|188490476|gb|EDU65579.1| OmpA family protein [Escherichia coli 53638]
gi|194411792|gb|EDX28113.1| OmpA family protein [Escherichia coli B171]
gi|209762578|gb|ACI79601.1| putative outer membrane protein [Escherichia coli]
gi|209762584|gb|ACI79604.1| putative outer membrane protein [Escherichia coli]
gi|209913339|dbj|BAG78413.1| conserved hypothetical protein [Escherichia coli SE11]
gi|218352961|emb|CAU98761.1| putative outer membrane lipoprotein [Escherichia coli 55989]
gi|218361952|emb|CAQ99553.1| putative outer membrane lipoprotein [Escherichia coli IAI1]
gi|242378200|emb|CAQ32975.1| predicted outer membrane lipoprotein [Escherichia coli BL21(DE3)]
gi|253323545|gb|ACT28147.1| OmpA/MotB domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|253974476|gb|ACT40147.1| predicted outer membrane lipoprotein [Escherichia coli B str.
REL606]
gi|253978643|gb|ACT44313.1| predicted outer membrane lipoprotein [Escherichia coli BL21(DE3)]
gi|257755343|dbj|BAI26845.1| predicted outer membrane lipoprotein [Escherichia coli O26:H11 str.
11368]
gi|257760433|dbj|BAI31930.1| predicted outer membrane lipoprotein [Escherichia coli O103:H2 str.
12009]
gi|290763750|gb|ADD57711.1| OmpA family protein [Escherichia coli O55:H7 str. CB9615]
gi|291322045|gb|EFE61474.1| lipoprotein yfiB [Escherichia coli B088]
gi|291432065|gb|EFF05047.1| lipoprotein yfiB [Escherichia coli B185]
gi|300403026|gb|EFJ86564.1| OmpA family protein [Escherichia coli MS 84-1]
gi|300411899|gb|EFJ95209.1| OmpA family protein [Escherichia coli MS 115-1]
gi|300418292|gb|EFK01603.1| OmpA family protein [Escherichia coli MS 182-1]
gi|300461467|gb|EFK24960.1| OmpA family protein [Escherichia coli MS 187-1]
gi|300522391|gb|EFK43460.1| OmpA family protein [Escherichia coli MS 119-7]
gi|300527510|gb|EFK48572.1| OmpA family protein [Escherichia coli MS 107-1]
gi|300839004|gb|EFK66764.1| OmpA family protein [Escherichia coli MS 124-1]
gi|300846584|gb|EFK74344.1| OmpA family protein [Escherichia coli MS 78-1]
gi|306905512|gb|EFN36046.1| OmpA/MotB domain protein [Escherichia coli W]
gi|308122021|gb|EFO59283.1| OmpA family protein [Escherichia coli MS 145-7]
gi|315061919|gb|ADT76246.1| predicted outer membrane lipoprotein [Escherichia coli W]
gi|320198378|gb|EFW72980.1| Integral membrane protein YfiB [Escherichia coli EC4100B]
gi|320640787|gb|EFX10285.1| putative outer membrane lipoprotein [Escherichia coli O157:H7 str.
G5101]
gi|320646132|gb|EFX15077.1| putative outer membrane lipoprotein [Escherichia coli O157:H- str.
493-89]
gi|320651429|gb|EFX19830.1| putative outer membrane lipoprotein [Escherichia coli O157:H- str.
H 2687]
gi|320657034|gb|EFX24857.1| putative outer membrane lipoprotein [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320662698|gb|EFX30042.1| putative outer membrane lipoprotein [Escherichia coli O55:H7 str.
USDA 5905]
gi|320667515|gb|EFX34439.1| putative outer membrane lipoprotein [Escherichia coli O157:H7 str.
LSU-61]
gi|323156259|gb|EFZ42418.1| ompA family protein [Escherichia coli EPECa14]
gi|323173078|gb|EFZ58709.1| ompA family protein [Escherichia coli LT-68]
gi|323377501|gb|ADX49769.1| OmpA/MotB domain protein [Escherichia coli KO11]
gi|323960537|gb|EGB56166.1| OmpA family protein [Escherichia coli H489]
gi|323971452|gb|EGB66688.1| OmpA family protein [Escherichia coli TA007]
gi|324016591|gb|EGB85810.1| OmpA family protein [Escherichia coli MS 117-3]
gi|324120062|gb|EGC13938.1| OmpA family protein [Escherichia coli E1167]
gi|331047444|gb|EGI19521.1| YfiB [Escherichia coli M718]
gi|331063023|gb|EGI34936.1| YfiB [Escherichia coli TA271]
gi|331073426|gb|EGI44747.1| YfiB [Escherichia coli H591]
Length = 160
Score = 72.1 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 54/149 (36%), Gaps = 3/149 (2%)
Query: 8 IILSAITMMSISGIDNL-DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADI 66
+I +++ + + + + +S + D++ F + Y + P
Sbjct: 9 LIFTSLILTGCQSPQGKFTPEQVAAMQSYGFTESAGDWSLGLSDAILFAKNDYKLLPESQ 68
Query: 67 QVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMK 124
Q + + + L ++GH D G + + L L+RA V + + G +
Sbjct: 69 QQIQTMAAKLASTGLTHARMDGHTDNYGEDSYNEGLSLKRANVVADAWAMGGQIPRSNLT 128
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
GK+ P A+NRR V +
Sbjct: 129 TQGLGKKYPIASNKTAQGRAENRRVAVVI 157
>gi|152994404|ref|YP_001339239.1| OmpA/MotB domain-containing protein [Marinomonas sp. MWYL1]
gi|150835328|gb|ABR69304.1| OmpA/MotB domain protein [Marinomonas sp. MWYL1]
Length = 359
Score = 72.1 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 57/139 (41%), Gaps = 4/139 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDT--SSYSIRPADIQVLSNLGSWLEKH 79
+ + + + + E++ Q + + + + ++ + + +L+++
Sbjct: 219 EQVQEEPITASPMAEETTQQPEIVAEPPGKINIQFGLNKTNVEQKFYPEIEKIAIFLKEN 278
Query: 80 D-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYG 137
+IEGH D G+ + + L +RA A+ ISA+R++ YG+E P V
Sbjct: 279 PGSTVMIEGHTDNSGAASYNQKLSEKRAKAIAEVLTNTFEISATRVEAIGYGEERPFVEN 338
Query: 138 HDEDAYAKNRRAIVFLKGC 156
E NRR + +
Sbjct: 339 DTEAHREANRRVVAIISTS 357
>gi|255533363|ref|YP_003093735.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366]
gi|255346347|gb|ACU05673.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366]
Length = 282
Score = 72.1 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 6/114 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHAD----ELGSRNSSIA 100
S+ D++ + + SY I P + LS + ++ + D LIEG+ D + + ++
Sbjct: 149 ISLSDNMLYKSGSYEILPKAGETLSKIAKIIKDYRDYDVLIEGNTDNVPISMVNIRNNWD 208
Query: 101 LGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V G+ R+ G+ P E AKNRR + +
Sbjct: 209 LSALRASSVVQALQNTYGVDPKRLTAGGRGEYNPLAANDTEAGKAKNRRTQIII 262
>gi|86147426|ref|ZP_01065738.1| flagellar motor protein [Vibrio sp. MED222]
gi|85834719|gb|EAQ52865.1| flagellar motor protein [Vibrio sp. MED222]
Length = 315
Score = 72.1 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 45/128 (35%), Gaps = 5/128 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ +L +Q + + F + S ++P ++ + ++ I GH D
Sbjct: 173 QGAIEVENLGQQIVIRIREKGAFPSGSAFLQPKFRPLVRQVAELVKDVPGIVRISGHTDN 232
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S+ L +RA +V RG S R++V P E + N
Sbjct: 233 QRLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRLRVRGMADTEPVEPNDTEWQRSLN 292
Query: 147 RRAIVFLK 154
RR + +
Sbjct: 293 RRVEISIM 300
>gi|113968495|ref|YP_732288.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-4]
gi|113883179|gb|ABI37231.1| OmpA/MotB domain protein [Shewanella sp. MR-4]
Length = 487
Score = 72.1 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 5/125 (4%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRN 96
+ E + + F+ S + P V+ L S+L+ + F + GH D+ G++
Sbjct: 365 TDQIEAKGHVALEGLLFEYDSDKLLPEAQPVVEVLASYLKANPKRAFYVVGHTDDKGNQA 424
Query: 97 SSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+ L RRA A+ +++ G+ P DE +NRR + L
Sbjct: 425 YNQGLSQRRAVAIVKLLTTSHGIPTQQLEAVGIGEHAPVASNSDEAGQQQNRRVELVL-- 482
Query: 156 CRANT 160
R++T
Sbjct: 483 -RSDT 486
>gi|260770556|ref|ZP_05879489.1| protein F-related protein [Vibrio furnissii CIP 102972]
gi|260615894|gb|EEX41080.1| protein F-related protein [Vibrio furnissii CIP 102972]
gi|315181629|gb|ADT88542.1| OmpA family protein [Vibrio furnissii NCTC 11218]
Length = 209
Score = 72.1 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALG 102
+ D+V FDT S ++ LS +GS+ + D +I+GH D G + AL
Sbjct: 94 VMVKLKDTVKFDTGSSNVSQDSAYWLSVMGSFLSRERGIDIVIDGHTDNTGKPRFNDALS 153
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
++RA V N + + ++ + YG+ +P+ + A NRR +
Sbjct: 154 VKRAQMVKNTLINKNVARDAIYTRGYGEYVPACNNGTYEGRACNRRVEL 202
>gi|284034989|ref|YP_003384919.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
gi|283814282|gb|ADB36120.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
Length = 432
Score = 72.1 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 46/116 (39%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNS 97
+ L ++ + F + S + + ++ + + + +EGH D +G +
Sbjct: 314 TPLAVGDKVTLKNIYFEMSKSNLLSASFAELNKLVSMMQDNPNMSIRLEGHTDIIGDHDK 373
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L R A Y V +GI R++ YG P + ++ NRR +
Sbjct: 374 NLQLSRDRVIACQRYLVQQGIDIDRIQTIGYGDTRPILTKGTDEERKVNRRVEFVI 429
>gi|218690723|ref|YP_002398935.1| putative outer membrane lipoprotein [Escherichia coli ED1a]
gi|218428287|emb|CAR09211.2| putative outer membrane lipoprotein [Escherichia coli ED1a]
gi|315298676|gb|EFU57930.1| OmpA family protein [Escherichia coli MS 16-3]
Length = 160
Score = 72.1 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 54/149 (36%), Gaps = 3/149 (2%)
Query: 8 IILSAITMMSISGIDNL-DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADI 66
+I +++ + + + + +S + D++ F + Y + P
Sbjct: 9 LIFTSLILTGCQSPQGKFTPEQVAAMQSYGFTESAGDWSLGLSDAILFAKNDYKLLPESQ 68
Query: 67 QVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMK 124
Q + + + L ++GH D G + + L L+RA V + + G +
Sbjct: 69 QQIQTMAAKLASTGLTHARMDGHTDNYGEDSYNEVLSLKRANVVADAWAMGGQIPRSNLT 128
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
GK+ P A+NRR V +
Sbjct: 129 TQGLGKKYPIASNKTAQGRAENRRVAVVI 157
>gi|51244080|ref|YP_063964.1| outer membrane protein F [Desulfotalea psychrophila LSv54]
gi|50875117|emb|CAG34957.1| probable outer membrane protein F [Desulfotalea psychrophila LSv54]
Length = 216
Score = 72.1 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 61/119 (51%), Gaps = 6/119 (5%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSI 99
Q+ +++ FFDT+S++I+P ++ + + + + + + GH D LG+ +
Sbjct: 103 QDVLTATFKGETFFDTNSFTIKPGGWAEVNRVATVLNKYPNTNIKVAGHTDSLGNEAYNQ 162
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
L RRA AV N + G++ +R++ YG+ +P + A+NRR + + +A
Sbjct: 163 QLSERRARAVKNALIQYGVNGNRIRAIGYGESLPISSSN-----AQNRRVEIVITPNQA 216
>gi|319952094|ref|YP_004163361.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
gi|319420754|gb|ADV47863.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
Length = 370
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 1/122 (0%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNS 97
Q V + + FD SI Q LS+L ++L+ + + + GH D +GS
Sbjct: 239 PSYTQNQLYVIEELLFDFDETSIEIDYNQQLSDLVTYLKSNPKLNVYLYGHTDAMGSVKY 298
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
+ L +RA V ++ V G+S +R+ +G + P V ED KNRR + +
Sbjct: 299 NDDLSEKRAATVASFLVKSGLSKNRISWKGFGFKKPVVSNEKEDIRFKNRRVEFLVAEPQ 358
Query: 158 AN 159
+N
Sbjct: 359 SN 360
>gi|302341627|ref|YP_003806156.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075]
gi|301638240|gb|ADK83562.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075]
Length = 361
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 55/143 (38%), Gaps = 3/143 (2%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
A T+ + + K+ + S+L Q ++ V FD ++P L
Sbjct: 218 AFTLAVLIEPKAREQKMVTVKAAEMASNLDSQGRIAL-YGVHFDFDKAVVKPESRPTLQE 276
Query: 72 LGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFV-ARGISASRMKVTSYG 129
+ + L + L+ GH D G ++ L RRA AV G++ R+ G
Sbjct: 277 IAALLAADPALEILVVGHTDNQGGFAYNVELSQRRAQAVVKALTGDFGVAPGRLTPFGAG 336
Query: 130 KEMPSVYGHDEDAYAKNRRAIVF 152
P+ E+ AKNRR +
Sbjct: 337 MAAPTASNDSEEGRAKNRRVELV 359
>gi|261210344|ref|ZP_05924639.1| outer membrane protein A precursor [Vibrio sp. RC341]
gi|260840571|gb|EEX67132.1| outer membrane protein A precursor [Vibrio sp. RC341]
Length = 293
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 56/135 (41%), Gaps = 10/135 (7%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSV---------FFDTSSYSIRPADIQVLSNLGSWLE 77
+ +P + E ++ V V F +S ++ + +
Sbjct: 158 QPETPMVIREEVPVEVIREVEVAQDVVRQEFVGEKLFAFNSSELKASSSLDMMMDALMAN 217
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+ +EGH+D +GS + AL RRA AV YF+ GI ASR+ V G + P
Sbjct: 218 E-SLSLTLEGHSDSVGSEEYNQALSERRAQAVAEYFILNGIDASRITVMGKGSQEPVASN 276
Query: 138 HDEDAYAKNRRAIVF 152
+ A+NRR ++F
Sbjct: 277 DSDIGRAQNRRVVLF 291
>gi|254496705|ref|ZP_05109568.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
gi|254354133|gb|EET12805.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
Length = 293
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 3/109 (2%)
Query: 48 VGDSVF-FDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHADELGSRNSSIALGLR 104
V +SVF F S + D L + ++ + + G+ADE G + + A+
Sbjct: 182 VKESVFHFGPDSRELTDEDKAQLRRIAQYVAADMQIKVIRVVGYADESGRKGYNNAISQD 241
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA V NY + G+ ++ VT +G P + A NRR ++ L
Sbjct: 242 RAQVVQNYLITLGVPEEQLSVTWFGALKPVARNDTDAGRALNRRVVISL 290
>gi|224369952|ref|YP_002604116.1| MotB2 [Desulfobacterium autotrophicum HRM2]
gi|223692669|gb|ACN15952.1| MotB2 [Desulfobacterium autotrophicum HRM2]
Length = 244
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 49/130 (37%), Gaps = 5/130 (3%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGH 88
+ L + ++ FD+ S +++ +L + E + I+G+
Sbjct: 109 EAPDTIKTHVLDGKVIVTINGQTLFDSGSANLKQGATAILDRIVAVVFEYPEYSINIKGY 168
Query: 89 ADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
D++ S+ L RA V + + +GI+ R+ T Y P V + A
Sbjct: 169 TDDIPIETAQFPSNWELSAIRATTVLKHLIQKGINPKRLTATGYADMEPLVPNTSDTNRA 228
Query: 145 KNRRAIVFLK 154
NRR L+
Sbjct: 229 INRRVEFVLE 238
>gi|229058360|ref|ZP_04196744.1| OmpA/MotB domain protein [Bacillus cereus AH603]
gi|229166569|ref|ZP_04294321.1| OmpA/MotB domain protein [Bacillus cereus AH621]
gi|228616823|gb|EEK73896.1| OmpA/MotB domain protein [Bacillus cereus AH621]
gi|228719869|gb|EEL71459.1| OmpA/MotB domain protein [Bacillus cereus AH603]
Length = 225
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 52/127 (40%), Gaps = 5/127 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ +N S + D++ FDT +++P +V+S L + + ++EGH D
Sbjct: 98 SQVNVYREDTGVSIVIVDNLIFDTGDANVKPEAKEVISQLVGFFQSVPNPIVVEGHTDSR 157
Query: 93 GSRNS----SIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
N + L RA + ++ + + R+ Y P + KNR
Sbjct: 158 PIHNEKFPSNWELSSARAANMIHHLIEVYNVDDKRLAAVGYADTKPVASNDSPQNWEKNR 217
Query: 148 RAIVFLK 154
R ++++K
Sbjct: 218 RVVIYIK 224
>gi|218710365|ref|YP_002417986.1| flagellar motor protein MotB [Vibrio splendidus LGP32]
gi|218323384|emb|CAV19561.1| Flagellar motor protein [Vibrio splendidus LGP32]
Length = 315
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 45/128 (35%), Gaps = 5/128 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ +L +Q + + F + S ++P ++ + ++ I GH D
Sbjct: 173 QGAIEVENLGQQIVIRIREKGAFPSGSAFLQPKFRPLVRQVAELVKDVPGIVRISGHTDN 232
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S+ L +RA +V RG S R++V P E + N
Sbjct: 233 QRLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRLRVRGMADTEPVEPNDTEWQRSLN 292
Query: 147 RRAIVFLK 154
RR + +
Sbjct: 293 RRVEISIM 300
>gi|313835693|gb|EFS73407.1| OmpA family protein [Propionibacterium acnes HL037PA2]
gi|314928364|gb|EFS92195.1| OmpA family protein [Propionibacterium acnes HL044PA1]
gi|314970216|gb|EFT14314.1| OmpA family protein [Propionibacterium acnes HL037PA3]
Length = 115
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 41/113 (36%), Gaps = 2/113 (1%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHADELGSRNSSIAL 101
+ SV FD S ++PA Q++ + K + G+ D GS ++ L
Sbjct: 1 MKIDLDASVLFDLDSDVVKPAGRQIIDRMVKQFVARKVSGKIGVTGYTDNSGSVAHNLDL 60
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RRA +V + + G+ P E NRR + +K
Sbjct: 61 SRRRAVSVARLLGLQLSKGVTLVTAGKGEADPVASNDSEAGRRLNRRVTITVK 113
>gi|229013711|ref|ZP_04170840.1| OmpA/MotB domain protein [Bacillus mycoides DSM 2048]
gi|228747633|gb|EEL97507.1| OmpA/MotB domain protein [Bacillus mycoides DSM 2048]
Length = 234
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 18/128 (14%), Positives = 44/128 (34%), Gaps = 6/128 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+ ++ ++ ++V FD+ ++ + + + + + + + GH D
Sbjct: 99 SSSFQTKLTEKGLMLTILENVLFDSGKADVKLESLGIAKEMSNLLVSASPREITVSGHTD 158
Query: 91 ELGSRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ N+ A R + + + + YG+ + AK
Sbjct: 159 TVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAVGYGEYRSIAPNDTPEGKAK 218
Query: 146 NRRAIVFL 153
NRR VF+
Sbjct: 219 NRRVEVFI 226
>gi|126732831|ref|ZP_01748624.1| hypothetical protein SSE37_02990 [Sagittula stellata E-37]
gi|126706670|gb|EBA05743.1| hypothetical protein SSE37_02990 [Sagittula stellata E-37]
Length = 605
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 46/135 (34%), Gaps = 5/135 (3%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL 84
D + + + E +G ++ F + + + + +G L +
Sbjct: 466 DIRTALEGQEVEVDVKNEWILIRLGSALRFASGRAELENDLSALATAIGVVLNEQPGPIR 525
Query: 85 IEGHADELG-----SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
I GH+D + ++ L RA V + A R+ V G P
Sbjct: 526 IVGHSDSVPLSGRGRFKTNEELSQARAQTVTDLVTANLDDKERVSVEGKGPVDPIADNAT 585
Query: 140 EDAYAKNRRAIVFLK 154
+ A+NRR + ++
Sbjct: 586 AEGRARNRRVEIMIR 600
>gi|126727783|ref|ZP_01743613.1| OmpA domain protein [Rhodobacterales bacterium HTCC2150]
gi|126702910|gb|EBA02013.1| OmpA domain protein [Rhodobacterales bacterium HTCC2150]
Length = 630
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 49/131 (37%), Gaps = 1/131 (0%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCD 82
++ + E + ++ + F + I + + L + +
Sbjct: 473 VEPPLPEDAPKSPEVCITNISTALASRKIAFAPGAADIEATSLSTIDKLTEAFQGCSEVA 532
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
I GH D G ++ L +RA AV N +ARG+ S + YG+ +P E+
Sbjct: 533 MEIGGHTDSQGRETMNLNLSQQRADAVLNGLLARGVLTSNLTAKGYGETVPIADNGTEEG 592
Query: 143 YAKNRRAIVFL 153
+NRR L
Sbjct: 593 REENRRIEFVL 603
>gi|294675945|ref|YP_003576560.1| OmpA/MotB domain-containing protein [Rhodobacter capsulatus SB
1003]
gi|294474765|gb|ADE84153.1| OmpA/MotB domain protein [Rhodobacter capsulatus SB 1003]
Length = 739
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/148 (23%), Positives = 55/148 (37%), Gaps = 4/148 (2%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS 70
+A +S+ LD ++ PD + L + D + F+ SS +I+P D L
Sbjct: 458 AAPIALSVKYDRRLDASLALPDGNDCVARLNGALA---RDKIGFEPSSATIKPEDGPKLD 514
Query: 71 NLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
L + + D + GH D GS + L RA AV AR + + YG
Sbjct: 515 ALAKAMAQCQDFRMEVAGHTDSQGSDEGNRKLSQARAEAVITALSARRVLTRNLTPKGYG 574
Query: 130 KEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
+ P + RR L +
Sbjct: 575 ESQPIAENDTDKGREATRRIEFVLLDAK 602
>gi|165940436|ref|ZP_02228930.1| PAL/OmpA-family membrane protein [Yersinia pestis biovar Orientalis
str. IP275]
gi|165911633|gb|EDR30316.1| PAL/OmpA-family membrane protein [Yersinia pestis biovar Orientalis
str. IP275]
Length = 307
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 2/103 (1%)
Query: 53 FFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FD +++ ++L L K ++ GH D G ++ L L+RA A+ +
Sbjct: 176 LFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTDITGDAQANHILSLKRAEALRD 235
Query: 112 Y-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +S + V YG P D A NRR + L
Sbjct: 236 WMLSTSDVSPTCFAVQGYGATRPIADNDTPDGRALNRRVEISL 278
>gi|94676590|ref|YP_588572.1| peptidoglycan-associated lipoprotein precursor [Baumannia
cicadellinicola str. Hc (Homalodisca coagulata)]
gi|94219740|gb|ABF13899.1| peptidoglycan-associated lipoprotein precursor [Baumannia
cicadellinicola str. Hc (Homalodisca coagulata)]
Length = 211
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/105 (40%), Positives = 65/105 (61%), Gaps = 1/105 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAY 107
+ ++F Y I+ I +L +L + +IEGHADE G+ +IALG RRA
Sbjct: 106 QNVIYFTLDKYKIKSCFIPMLDEHAQFLRSNPSAQVIIEGHADERGTPEYNIALGERRAN 165
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
AV Y ++G+ + ++K+ SYGKE P+V+GH++ AYAKNRR ++
Sbjct: 166 AVKRYLQSQGVCSEQIKIISYGKEKPAVFGHNKAAYAKNRRTVLV 210
>gi|27366879|ref|NP_762406.1| flagellar motor protein [Vibrio vulnificus CMCP6]
gi|27358446|gb|AAO07396.1|AE016809_158 Flagellar motor protein [Vibrio vulnificus CMCP6]
Length = 442
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 54/143 (37%), Gaps = 4/143 (2%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL 72
I+ ++++ +L +L ++ + + F++ S + V+S +
Sbjct: 283 ISSLAVANQIQRSLATEIEMVLLKVDALPDRVRITFQSNDLFESGSAELVAHIFPVVSKV 342
Query: 73 GSWLEKHDCDFLIEGHADELGSR----NSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
LE + L+ GH D S+ L L RA A+ + + G + R+
Sbjct: 343 ARALEATNGKILVVGHTDNNPIFTSKFPSNWHLSLARATALTDRLASAGKLSGRVIPEGM 402
Query: 129 GKEMPSVYGHDEDAYAKNRRAIV 151
G P V + + NRR +
Sbjct: 403 GDARPLVSNETAEGRSINRRVEI 425
>gi|303248961|ref|ZP_07335208.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ]
gi|302489684|gb|EFL49620.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ]
Length = 261
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 41/118 (34%), Gaps = 6/118 (5%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR----N 96
E+ + D + F + S I P ++L +G + D + GH D
Sbjct: 96 EKLEINFVDKILFASGSAEITPRGREILRKVGGVLAKVKDKSIYVVGHTDSNPIHSALYP 155
Query: 97 SSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L R+ +V + G ++ R P + +NRR + +
Sbjct: 156 SNWELSTARSASVIRFLSESGGVTPERFTAMGRAFYQPVASNATPEGRHENRRVDIIV 213
>gi|302392384|ref|YP_003828204.1| OmpA/MotB domain protein [Acetohalobium arabaticum DSM 5501]
gi|302204461|gb|ADL13139.1| OmpA/MotB domain protein [Acetohalobium arabaticum DSM 5501]
Length = 248
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 44/132 (33%), Gaps = 5/132 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ + + + + V FD +I+ +L + + + ++E
Sbjct: 99 QEQELEDEIKVEMTERGLTIRFTGKVLFDIGRATIKEDAYSILDKISGIISEVPNQIMVE 158
Query: 87 GHADELGSRNSSIALGLRRAYA-----VFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
GH D L NS + A V + I+ +++ Y K P +
Sbjct: 159 GHTDNLPISNSRFPSNWELSTARATEVVKYFIEENSITPAKLSAAGYSKYKPVKPNDSPE 218
Query: 142 AYAKNRRAIVFL 153
A NRR V L
Sbjct: 219 NRALNRRVDVIL 230
>gi|300716120|ref|YP_003740923.1| outer membrane protein A [Erwinia billingiae Eb661]
gi|299061956|emb|CAX59072.1| Outer membrane protein A [Erwinia billingiae Eb661]
Length = 357
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 56/130 (43%), Gaps = 12/130 (9%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRN 96
+ E ++ V F + S++P Q L L + L + D ++ G+ D +GS
Sbjct: 220 VVETKRFTLKSDVLFTFNKASLKPEGQQALDQLYTQLSSLDPKDGSVVVLGYTDRIGSDQ 279
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNR 147
+ L +RA +V +Y V++GI ++++ G+ P A +R
Sbjct: 280 YNQKLSEKRAQSVVDYLVSKGIPSNKISARGMGESNPVTGNTCDSVKGRNALIDCLAPDR 339
Query: 148 RAIVFLKGCR 157
R + +KG +
Sbjct: 340 RVEIEVKGIK 349
>gi|255744684|ref|ZP_05418635.1| Flagellar motor rotation protein MotB [Vibrio cholera CIRS 101]
gi|262161183|ref|ZP_06030294.1| Flagellar motor rotation protein MotB [Vibrio cholerae INDRE 91/1]
gi|262168686|ref|ZP_06036381.1| Flagellar motor rotation protein MotB [Vibrio cholerae RC27]
gi|255737715|gb|EET93109.1| Flagellar motor rotation protein MotB [Vibrio cholera CIRS 101]
gi|262022804|gb|EEY41510.1| Flagellar motor rotation protein MotB [Vibrio cholerae RC27]
gi|262028933|gb|EEY47586.1| Flagellar motor rotation protein MotB [Vibrio cholerae INDRE 91/1]
Length = 294
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 21/127 (16%), Positives = 42/127 (33%), Gaps = 5/127 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ +L +Q + + F S ++P ++ + ++ + GH D
Sbjct: 149 QGAIEVENLGQQIDIRIREKGAFPEGSAFLQPKFRPLVRQIAELVKDIPGKVRVTGHTDN 208
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S+ L +RA +V + R++V P E A N
Sbjct: 209 QKLDSELYRSNWDLSAQRAVSVAQEMEKVKDFDHLRLQVRGLADTQPLGPNDTEAQRATN 268
Query: 147 RRAIVFL 153
RR + +
Sbjct: 269 RRVEISI 275
>gi|261856894|ref|YP_003264177.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
gi|261837363|gb|ACX97130.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
Length = 331
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 2/105 (1%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+ F T S ++ + + L + ++ I GH D+ G+ ++ L RA AV
Sbjct: 227 IHFATDSAALEASSDKELGEMAKMLKQEPSAHVYIVGHTDDTGALPHNLKLSRDRADAVV 286
Query: 111 NYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ R IS++R+ P + A NRR + L+
Sbjct: 287 KALITRYGISSNRLVAEGVASFAPVASNASDQGRALNRRVEIVLQ 331
>gi|261855180|ref|YP_003262463.1| peptidoglycan-associated lipoprotein [Halothiobacillus neapolitanus
c2]
gi|261835649|gb|ACX95416.1| peptidoglycan-associated lipoprotein [Halothiobacillus neapolitanus
c2]
Length = 127
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 43/121 (35%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
+ +ES L +V+F Y++ P+ +L ++L+++ L+EG+ D
Sbjct: 3 GSGTDESVLYASAPKGDAATVYFGFDKYNVDPSYRPMLQQNAAFLKENTQRHVLVEGNTD 62
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GSR +IALG +RA AV + +A G++ S++ V SYG+E P+V G++E A+AKNRRA
Sbjct: 63 NRGSREYNIALGEKRAVAVRDTLLADGVAPSQVDVVSYGEERPAVEGNNEAAWAKNRRAD 122
Query: 151 V 151
+
Sbjct: 123 L 123
>gi|254457990|ref|ZP_05071417.1| OmpA/MotB [Campylobacterales bacterium GD 1]
gi|207085383|gb|EDZ62668.1| OmpA/MotB [Campylobacterales bacterium GD 1]
Length = 219
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 49/136 (36%), Gaps = 8/136 (5%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSI-RPADIQVLSNLGSWLE--KHDCDFLIEGH 88
++ QE F + S+ F + S +I + L + +E + ++GH
Sbjct: 68 GPAISVEEAQEGFVIELPASLLFKSGSATIENEDALLFLKRVALIVEELPNSMQVSVQGH 127
Query: 89 ADELGS-----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
D G + L RA +V + + R+ + + + P E
Sbjct: 128 TDNQGPGNNSVFKDNWELSSARAISVLQELLLDSVDPKRISASGFAEYKPLATNVTEAGR 187
Query: 144 AKNRRAIVFLKGCRAN 159
KNRR + G +++
Sbjct: 188 EKNRRVELHFYGSKSD 203
>gi|150007641|ref|YP_001302384.1| outer membrane lipoprotein [Parabacteroides distasonis ATCC 8503]
gi|149936065|gb|ABR42762.1| outer membrane protein, putative OmpA domain protein
[Parabacteroides distasonis ATCC 8503]
Length = 445
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+ FD +I+P + ++ + + D F +EGH D G+ S+ L R+ A+
Sbjct: 342 ITFDVGKSTIKPESMGEINRIVKLMTDNPDLRFSVEGHTDSTGNEASNQTLSEARSNAIV 401
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
V GISA R+ + G+ P ++ AKNRR
Sbjct: 402 GKLVELGISADRLSASGKGQSSPIADNGTDEGRAKNRRVEFV 443
>gi|149188836|ref|ZP_01867126.1| Conserved hypothetical outer membrane protein [Vibrio shilonii AK1]
gi|148837256|gb|EDL54203.1| Conserved hypothetical outer membrane protein [Vibrio shilonii AK1]
Length = 221
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 51/103 (49%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
V F Y++ P + L+ + L ++ + +EGH D +GS + ALG+RRA A
Sbjct: 110 RVHFAFDKYNLTPLAHKTLTGVAKQLAANNFEVTVEGHTDWVGSDEYNQALGMRRATATA 169
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
N + G+ + ++G+ P D ++NRR+ V++
Sbjct: 170 NELASNGVRKENTTLKTFGESEPLASNKTADGRSQNRRSDVYI 212
>gi|114776299|ref|ZP_01451344.1| OmpA family protein [Mariprofundus ferrooxydans PV-1]
gi|114553129|gb|EAU55527.1| OmpA family protein [Mariprofundus ferrooxydans PV-1]
Length = 167
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 7/156 (4%)
Query: 4 STIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG------DSVFFDTS 57
IF++ A + +G +Q +++ ++V+F
Sbjct: 10 KQIFMVALAAAALLFAGCSKKMEVAPEAKPAPQAQVVQPVVTTTTSVTKPSTNAVYFAFD 69
Query: 58 SYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
S ++ + L +WL ++ + IEG+ DE GSR ++ALG RRA +V +Y A
Sbjct: 70 SSALDASARATLDGYAAWLNANNSENITIEGNCDERGSREYNLALGQRRADSVRDYLTAN 129
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
GI+A R+ S+G+E P G E +A+NRR +
Sbjct: 130 GIAAGRIDTVSFGEERPVCKGTGEACWAQNRRGDIV 165
>gi|256839827|ref|ZP_05545336.1| outer membrane lipoprotein [Parabacteroides sp. D13]
gi|298375585|ref|ZP_06985542.1| OmpA family protein [Bacteroides sp. 3_1_19]
gi|256738757|gb|EEU52082.1| outer membrane lipoprotein [Parabacteroides sp. D13]
gi|298268085|gb|EFI09741.1| OmpA family protein [Bacteroides sp. 3_1_19]
Length = 428
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+ FD +I+P + ++ + + D F +EGH D G+ S+ L R+ A+
Sbjct: 325 ITFDVGKSTIKPESMGEINRIVKLMTDNPDLRFSVEGHTDSTGNEASNQTLSEARSNAIV 384
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
V GISA R+ + G+ P ++ AKNRR
Sbjct: 385 GKLVELGISADRLSASGKGQSSPIADNGTDEGRAKNRRVEFV 426
>gi|193227219|gb|ACF16394.1| outer membrane protein P6 [Pasteurella pneumotropica]
Length = 156
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 44/155 (28%), Positives = 79/155 (50%), Gaps = 5/155 (3%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG---DSVFFDTS 57
M + +L A ++ +++ + + N + + ++V+F
Sbjct: 1 MNKF-VKSLLVAGSVAALAACSSSSNDAAGNGAATNGQTFGGYSVEDLQQRYNTVYFGFD 59
Query: 58 SYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
Y+I +Q+L ++L ++EG+ DE G+ +IALG RRA AV ++ +
Sbjct: 60 KYNIEGEYVQILDAHAAYLNATPASKVIVEGNTDERGTPEYNIALGQRRADAVKSFLAGK 119
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
G+ S++ SYG+E P+V GHDE AY+KNRRA++
Sbjct: 120 GVEGSKVSTVSYGEEKPAVLGHDEAAYSKNRRAVL 154
>gi|331648547|ref|ZP_08349635.1| putative OmpA-family membrane protein [Escherichia coli M605]
gi|330908848|gb|EGH37362.1| putative outer membrane lipoprotein [Escherichia coli AA86]
gi|331042294|gb|EGI14436.1| putative OmpA-family membrane protein [Escherichia coli M605]
Length = 550
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 49/126 (38%), Gaps = 2/126 (1%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGH 88
P+ + ++ + + FD ++ +VL + L + K L+ G+
Sbjct: 414 PPEQKMEVTASLPVQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGY 473
Query: 89 ADELGSRNSSIALGLRRAYAVFNY-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
D G S+ L LRRA AV N+ I A+ V G+ P+ A NR
Sbjct: 474 TDATGDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNR 533
Query: 148 RAIVFL 153
R + L
Sbjct: 534 RVEISL 539
>gi|302035652|ref|YP_003795974.1| putative OmpA/MotB family outer membrane protein [Candidatus
Nitrospira defluvii]
gi|300603716|emb|CBK40047.1| putative Outer membrane protein, OmpA/MotB family [Candidatus
Nitrospira defluvii]
Length = 400
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 21/149 (14%), Positives = 53/149 (35%), Gaps = 8/149 (5%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL 72
++ + + + L +Q + + ++ FD+ +++P VL +
Sbjct: 250 TSLAEAKDDLSKLLQAEVAKGNVTMKQLGDQLTLGLATTLLFDSGEATLKPGGADVLHRI 309
Query: 73 GSW-LEKHDCDFLIEGHADELG-------SRNSSIALGLRRAYAVFNYFVARGISASRMK 124
G + D + GH D + + +++ L RA + G++ +++
Sbjct: 310 GGVLKQYPDRSIHVAGHTDNVPIKGRLAKTYPTNVELSQARAESARQALTEGGMAPDKIE 369
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ P + KNRR + +
Sbjct: 370 AKGHADSRPMASNSTAEGRQKNRRVEIVV 398
>gi|254283478|ref|ZP_04958446.1| OmpA family protein [gamma proteobacterium NOR51-B]
gi|219679681|gb|EED36030.1| OmpA family protein [gamma proteobacterium NOR51-B]
Length = 199
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 1/120 (0%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELG 93
++ + + + F + S ++ + +L +L + L++ + I GH+D LG
Sbjct: 57 VSVERRDDHLLIVMPGTASFASDSALLKSNMLGLLDDLSTVLQEFNKSLIFIGGHSDSLG 116
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L +RA AV + GI + R+ V +G P E A NRR + +
Sbjct: 117 DSGYNLYLSRQRALAVGTHLSKVGIDSWRLVVRGFGDAKPIATNDTESGRAGNRRIELTV 176
>gi|157368311|ref|YP_001476300.1| putative outer membrane lipoprotein [Serratia proteamaculans 568]
gi|157320075|gb|ABV39172.1| OmpA/MotB domain protein [Serratia proteamaculans 568]
Length = 220
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 64/124 (51%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD+SS +++PA L+ + L+++ I G+ D
Sbjct: 94 GTGVSVTRQGDNIVLNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNIIGYTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GSR ++ L +RA V + + +G++A+R++ + G + P + A+NRR
Sbjct: 154 STGSRALNMTLSQQRADGVGSALITQGVAANRVRTSGAGPDNPIASNSTTEGKAQNRRVE 213
Query: 151 VFLK 154
+ L
Sbjct: 214 ITLS 217
>gi|254228602|ref|ZP_04922026.1| Flagellar motor protein [Vibrio sp. Ex25]
gi|262395023|ref|YP_003286877.1| Flagellar motor rotation protein MotB [Vibrio sp. Ex25]
gi|151938781|gb|EDN57615.1| Flagellar motor protein [Vibrio sp. Ex25]
gi|262338617|gb|ACY52412.1| Flagellar motor rotation protein MotB [Vibrio sp. Ex25]
Length = 315
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 46/128 (35%), Gaps = 5/128 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ +L +Q + + F S ++P ++ + ++ + GH D
Sbjct: 174 QGAIEVENLGQQIVIRMREKGAFPEGSAFLQPKFRPLVRQIAELVKDVPGIVRVSGHTDN 233
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S+ L +RA +V RG S R++V P + ++ A N
Sbjct: 234 RPLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRLRVRGMADTEPLLPNDSDENRALN 293
Query: 147 RRAIVFLK 154
RR + +
Sbjct: 294 RRVEISIM 301
>gi|303240000|ref|ZP_07326522.1| OmpA/MotB domain protein [Acetivibrio cellulolyticus CD2]
gi|302592479|gb|EFL62205.1| OmpA/MotB domain protein [Acetivibrio cellulolyticus CD2]
Length = 261
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 48/120 (40%), Gaps = 5/120 (4%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS---- 94
++ + ++ FD I+ + L +G ++K + + + GH D +
Sbjct: 140 DVKTSVILRIDSAILFDVGKADIKESGKDTLKKVGELMDKLNTNIAVMGHTDNIPINTSL 199
Query: 95 RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RRA V + V + +++ T G+ P E+ KNRR + +
Sbjct: 200 FPSNWELSTRRATNVVVFLVNECNLNPTKLTATGNGEFRPIAPNDSEENRQKNRRVDIVI 259
>gi|224370810|ref|YP_002604974.1| OmpF [Desulfobacterium autotrophicum HRM2]
gi|223693527|gb|ACN16810.1| OmpF [Desulfobacterium autotrophicum HRM2]
Length = 213
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 51/128 (39%), Gaps = 6/128 (4%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLI 85
+ + Q +++ + FFD S +++P L + L +
Sbjct: 86 SAVATSEAASIQRSQNVLTATFKANTFFDFDSSTLKPGAYSELDRVAKVLRDFPQTRIRV 145
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
EGH D G+ ++ L RRA AV + V RG+ RM+ +G+ P +
Sbjct: 146 EGHTDSKGTDQYNMLLSQRRAQAVTDALVQRGVDPMRMESIGFGESQPVSSNDGD----- 200
Query: 146 NRRAIVFL 153
NRR + +
Sbjct: 201 NRRVNIVI 208
>gi|83716533|ref|YP_439774.1| OmpA family domain-containing protein [Burkholderia thailandensis
E264]
gi|167616356|ref|ZP_02384990.1| OmpA family domain protein [Burkholderia thailandensis Bt4]
gi|257142917|ref|ZP_05591179.1| OmpA family domain-containing protein [Burkholderia thailandensis
E264]
gi|83650358|gb|ABC34422.1| OmpA family domain protein [Burkholderia thailandensis E264]
Length = 333
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 50/134 (37%), Gaps = 5/134 (3%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSS---VGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKH 79
+ + V++ S++Q+ +S+ ++FDT ++P L +
Sbjct: 198 VKPMQTGQVKVVDSSAMQKGLASTGKVALYGLYFDTDKAQVKPESKAQLDEMAKLLTANP 257
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGH 138
+ I GH D G ++ L +RA AV I+ R+ P
Sbjct: 258 NLKVYIVGHTDNQGQFAHNVDLSQKRADAVAQTLATTYRIAPGRLVAKGVASLSPVASNG 317
Query: 139 DEDAYAKNRRAIVF 152
DE A+NRR +
Sbjct: 318 DEAGRAQNRRVELV 331
>gi|16124456|ref|NP_419020.1| OmpA family protein [Caulobacter crescentus CB15]
gi|221233140|ref|YP_002515576.1| outer membrane protein [Caulobacter crescentus NA1000]
gi|13421324|gb|AAK22188.1| OmpA family protein [Caulobacter crescentus CB15]
gi|220962312|gb|ACL93668.1| outer membrane protein [Caulobacter crescentus NA1000]
Length = 226
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/115 (25%), Positives = 45/115 (39%), Gaps = 2/115 (1%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIA 100
+Q + V F ++P +VL ++ + GHAD G + +
Sbjct: 109 DQIVLVMPSDVTFAVDRSDVQPPFTRVLDDVARTLNAYPQTTIDVVGHADSSGPDDYNQT 168
Query: 101 LGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L RRA AV Y G+ R+ V G+ P D A+NRR + L+
Sbjct: 169 LSERRASAVAGYLTGPGGVLVDRVFVAGMGERAPIADNATADGRAQNRRVEIILR 223
>gi|310778794|ref|YP_003967127.1| OmpA/MotB domain protein [Ilyobacter polytropus DSM 2926]
gi|309748117|gb|ADO82779.1| OmpA/MotB domain protein [Ilyobacter polytropus DSM 2926]
Length = 208
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 57/131 (43%), Gaps = 1/131 (0%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDF 83
+ + + ++Q + + V FD + I+ +L +L L +
Sbjct: 77 NPETVFEKNGVIVKRERDQLTLIMPTDVVFDFNKSEIKEDFKPLLDSLYEALTIYKGLSV 136
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
I+GH D +GS + ++ L +RA + Y V++G++A R+ + P+ +
Sbjct: 137 KIDGHTDNIGSYDYNLKLSQKRAESAKEYLVSKGLNAGRIITEGHSFSTPAASNATQAGR 196
Query: 144 AKNRRAIVFLK 154
KNRR V +K
Sbjct: 197 DKNRRIEVVIK 207
>gi|167838594|ref|ZP_02465453.1| hypothetical protein Bpse38_18947 [Burkholderia thailandensis
MSMB43]
Length = 391
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 20/127 (15%), Positives = 41/127 (32%), Gaps = 4/127 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
++ S + F + + ++ + + + K ++ G+ D
Sbjct: 263 AAGTVSVDEDARHSSVTFRGDAMFPPGAAGVNATMGPLVKKIAAEIAKVPGKVIVLGYTD 322
Query: 91 ELGSRNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
++ A L RA V + G+ ASR++ G P A N
Sbjct: 323 NQPIKSRQFASNEALSEERATQVMQMLQSAGVPASRLEALGKGDANPIGDNRTPQGRALN 382
Query: 147 RRAIVFL 153
RR + +
Sbjct: 383 RRVEITV 389
>gi|295690756|ref|YP_003594449.1| OmpA/MotB domain-containing protein [Caulobacter segnis ATCC 21756]
gi|295432659|gb|ADG11831.1| OmpA/MotB domain protein [Caulobacter segnis ATCC 21756]
Length = 189
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--LIEGHADELGSRNSSI 99
+ DSV F ++ ++ P Q LS L+ + + I+GH D GS+ +
Sbjct: 74 QYALVLSDDSVKFPVNAATLSPEAEQRLSEFTEKLKADNKNVYLEIQGHTDNSGSKEYND 133
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
LG +RA V + G++ +RM SYG+E P + A+NRR +V +
Sbjct: 134 ELGEKRAETVRKFLSQHGVALNRMATISYGQEAPVAPNETREGRAQNRRVVVMV 187
>gi|4580965|gb|AAD24552.1|AF117960_1 OprF [Pseudomonas agarici]
Length = 322
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 47/111 (42%), Gaps = 2/111 (1%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGL 103
V V FD ++P + NL +++++ +++G+ D +G+ + L
Sbjct: 212 MVKVQLDVKFDFDKSVVKPNSYADIKNLADFMKQYPQTSTVVKGYTDNVGTDAYNQKLSE 271
Query: 104 RRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RRA+AV + R+ YGK P+ ++ A NRR +
Sbjct: 272 RRAHAVAQVLTNQYGVEQSRVSSLGYGKNNPAASNATKEGQAINRRVEASV 322
>gi|262375579|ref|ZP_06068812.1| peptidoglycan-associated lipoprotein [Acinetobacter lwoffii SH145]
gi|262309833|gb|EEY90963.1| peptidoglycan-associated lipoprotein [Acinetobacter lwoffii SH145]
Length = 190
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 1/125 (0%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIE 86
+ + E + V FD S + D+ L + + + +
Sbjct: 56 AQNMAGASAKGVTAENKAFLAKRVVHFDYDSTELSNEDLNTLQAHAQFLMANANSRVALT 115
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
GH DE G+R ++ALG RRA AV ++ V G++ +++ SYGKEMP GHDE+A+ +N
Sbjct: 116 GHTDERGTREYNMALGERRAKAVESFLVTTGVNPGQLEAVSYGKEMPINAGHDENAWKEN 175
Query: 147 RRAIV 151
RR +
Sbjct: 176 RRVEI 180
>gi|261496884|ref|ZP_05993252.1| peptidoglycan-associated outer membrane lipoprotein [Mannheimia
haemolytica serotype A2 str. OVINE]
gi|261307408|gb|EEY08743.1| peptidoglycan-associated outer membrane lipoprotein [Mannheimia
haemolytica serotype A2 str. OVINE]
Length = 157
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 50/158 (31%), Positives = 77/158 (48%), Gaps = 10/158 (6%)
Query: 1 MQY--STIFIILSAITMMSISGIDNLDTKISSPDTVLNESS-----LQEQFSSSVGDSVF 53
M+ + + + A + + S + ++ + N + EQ + ++V+
Sbjct: 1 MKKFAKVLMVAVPAFALAACSSSSDDAAANAAANAAANAAGEFGGLTAEQLKAQY-NTVY 59
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYF 113
F SY++ Q+L L K + I GHADE G+ +IALG RRA AV Y
Sbjct: 60 FGFDSYAVEGEYRQLLDAHAQLLAKTQGNVTIAGHADERGTPEYNIALGQRRADAVKGYL 119
Query: 114 VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
A+G A+ SYG+E P+V GH E YAKNRRA++
Sbjct: 120 AAKG--ANNTSTVSYGEEKPAVLGHSEADYAKNRRAVL 155
>gi|302185388|ref|ZP_07262061.1| flagellar motor protein MotD [Pseudomonas syringae pv. syringae
642]
Length = 296
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 18/128 (14%), Positives = 44/128 (34%), Gaps = 5/128 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ + + S+ F + ++ + +++ D +EG D+
Sbjct: 118 SDQMTVRGNELWIEIELNSSMLFGSGDAMPSDKAFTIIEKVAGIVKRFDNPIHVEGFTDD 177
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
++ L R+ ++ A ++ +R+ YG+ P AKN
Sbjct: 178 QPISTAQFPTNWELSSARSASIVRMLAAMDGVNPARLASVGYGEFQPIAPNTSTAGRAKN 237
Query: 147 RRAIVFLK 154
RR ++ +
Sbjct: 238 RRVVLVIS 245
>gi|261342420|ref|ZP_05970278.1| OmpA family protein [Enterobacter cancerogenus ATCC 35316]
gi|288315055|gb|EFC53993.1| OmpA family protein [Enterobacter cancerogenus ATCC 35316]
Length = 606
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 49/120 (40%), Gaps = 3/120 (2%)
Query: 36 NESSLQEQFSSSVGDSV-FFDTSSYSIRPADIQVLSNLGSWLEKHDCDF-LIEGHADELG 93
N ++ + S+ D+V F S ++ P + L + + + LI GH+D G
Sbjct: 472 NLAADNDASLFSLADTVPLFANGSSTLMPDSEKTLLAVVPAIRRSPEKMFLIVGHSDSTG 531
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
S +++AL RA + + VA + G P +D A+NRR +
Sbjct: 532 SAATNLALSAERAQVIKEWLVAHTGLPAEQFITEGAGDTRPVANNDTKDGRAQNRRVEII 591
>gi|146329268|ref|YP_001210055.1| OmpA domain-containing protein [Dichelobacter nodosus VCS1703A]
gi|146232738|gb|ABQ13716.1| OmpA domain protein [Dichelobacter nodosus VCS1703A]
Length = 194
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/123 (31%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHA 89
D + + S + ++F S + I V++ +L H ++EGH
Sbjct: 71 QDPSYGVNVVGGPTSEAKDRVIYFSYDSAQLDSRSIAVITEHARYLRDHPDTRVVLEGHT 130
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
DE GSR +I LG RRAY+V F +G++ ++M+V SYG+E P+++ +E YA+NRR
Sbjct: 131 DERGSREYNIGLGERRAYSVKRIFEQQGVAQTQMRVLSYGEERPALWCSNESCYARNRRV 190
Query: 150 IVF 152
++
Sbjct: 191 VII 193
>gi|163939534|ref|YP_001644418.1| flagellar motor protein MotS [Bacillus weihenstephanensis KBAB4]
gi|163861731|gb|ABY42790.1| OmpA/MotB domain protein [Bacillus weihenstephanensis KBAB4]
Length = 227
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 52/127 (40%), Gaps = 5/127 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ +N S + D++ FDT +++P +V+S L + + ++EGH D
Sbjct: 100 SQVNVYREDTGISIVIVDNLIFDTGDANVKPEAKEVISQLVGFFQSVPNPIVVEGHTDSR 159
Query: 93 GSRNSS----IALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
N + L RA + ++ + + R+ Y P + KNR
Sbjct: 160 PIHNENFPSNWELSSARAANMIHHLIEVYNVDDKRLAAVGYADTKPVASNDSPQNWEKNR 219
Query: 148 RAIVFLK 154
R ++++K
Sbjct: 220 RVVIYIK 226
>gi|323978486|gb|EGB73569.1| OmpA family protein [Escherichia coli TW10509]
Length = 160
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 55/149 (36%), Gaps = 3/149 (2%)
Query: 8 IILSAITMMSISGIDNL-DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADI 66
+I +++ + + + + +S + D++ F + Y + P
Sbjct: 9 LIFTSLVLTGCQSPQGKFTPEQVAAMQSYGFTESAGDWSLGLSDAILFAKNDYKLLPESQ 68
Query: 67 QVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMK 124
Q + + + L ++GH D G + + AL L+RA V + + G +
Sbjct: 69 QQIQTMAAKLASTGLTRARMDGHTDNYGEDSYNEALSLKRANVVADAWAIGGQIPRSNLT 128
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
GK+ P A+NRR V +
Sbjct: 129 TQGLGKKYPIASNKTAQGRAENRRVAVVI 157
>gi|312129228|ref|YP_003996568.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132]
gi|311905774|gb|ADQ16215.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132]
Length = 705
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 54/136 (39%), Gaps = 2/136 (1%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
I K + + + + E V V+FD S +R L + + +H
Sbjct: 567 SIAQTAPKTVNAEPESVKDMVIEAGKKIVLREVYFDQSKAELRQESFVELDRIKKIMMEH 626
Query: 80 DCDFLI-EGHADELGSRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYG 137
++ EGH D G N + L +R V NY + I R+++ S+G+ P V
Sbjct: 627 PDMVILLEGHTDNQGDANLNFKLAEQRILNVKNYLIEDGQIKEERIQLKSWGQYRPLVKN 686
Query: 138 HDEDAYAKNRRAIVFL 153
E+ KNRR +
Sbjct: 687 TTEEERRKNRRVEFTI 702
>gi|331664170|ref|ZP_08365079.1| YfiB [Escherichia coli TA143]
gi|331058627|gb|EGI30605.1| YfiB [Escherichia coli TA143]
Length = 160
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 53/149 (35%), Gaps = 3/149 (2%)
Query: 8 IILSAITMMSISGIDNL-DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADI 66
+I +++ + + + + +S + D++ F + Y + P
Sbjct: 9 LIFTSLILTGCQSPQGKFTPEQVAAMQSYGFTESAGDWSLGLSDAILFAKNDYKLLPESQ 68
Query: 67 QVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMK 124
Q + + L ++GH D G + + L L+RA V + + G +
Sbjct: 69 QQIQTMAVKLASTGLTHARMDGHTDNYGEDSYNEGLSLKRANVVADAWAMGGKIPRSNLT 128
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
GK+ P A+NRR V +
Sbjct: 129 TQGLGKKYPIASNKTAQGRAENRRVAVVI 157
>gi|288940353|ref|YP_003442593.1| OmpA/MotB domain-containing protein [Allochromatium vinosum DSM
180]
gi|288895725|gb|ADC61561.1| OmpA/MotB domain protein [Allochromatium vinosum DSM 180]
Length = 608
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F T ++ ++ L + L+ H IEGH D LGS + +L L+RA AV
Sbjct: 504 FPTGRATLPTGELASLERIAELLKAHPELTARIEGHTDSLGSAALNQSLSLQRAEAVRQA 563
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V RG+ R+ G P + KNRR V++
Sbjct: 564 LVERGVDGGRLSAEGLGPTRPIADNATAEGRGKNRRVEVYI 604
>gi|46581507|ref|YP_012315.1| peptidoglycan-associated lipoprotein [Desulfovibrio vulgaris str.
Hildenborough]
gi|120601327|ref|YP_965727.1| OmpA/MotB domain-containing protein [Desulfovibrio vulgaris DP4]
gi|46450929|gb|AAS97575.1| peptidoglycan-associated lipoprotein, putative [Desulfovibrio
vulgaris str. Hildenborough]
gi|120561556|gb|ABM27300.1| OmpA/MotB domain protein [Desulfovibrio vulgaris DP4]
gi|311235156|gb|ADP88010.1| peptidoglycan-associated lipoprotein [Desulfovibrio vulgaris RCH1]
Length = 167
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 2/145 (1%)
Query: 11 SAITMMSISGI-DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVL 69
++ + + ++L V+F+ + ++ +VL
Sbjct: 21 FGCAKKQVAATPEAAPVSDMGDSKSADMAALARAQQIITDAKVYFEFDKFDLKAESKEVL 80
Query: 70 SNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
++K L+EGH DE G++ ++ALG RRA A + Y V G++A ++++ SY
Sbjct: 81 KQKAEVMKKFPSIRVLVEGHCDERGTQEYNLALGERRARAAYEYLVMLGVNAGQLEMISY 140
Query: 129 GKEMPSVYGHDEDAYAKNRRAIVFL 153
GKE P+V GH E A++KNRR +
Sbjct: 141 GKERPAVEGHGEAAWSKNRRDEFKV 165
>gi|313892856|ref|ZP_07826435.1| OmpA family protein [Veillonella sp. oral taxon 158 str. F0412]
gi|313442610|gb|EFR61023.1| OmpA family protein [Veillonella sp. oral taxon 158 str. F0412]
Length = 341
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 47/133 (35%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHD 80
+P V+ + S++FD+ R L+ + + +
Sbjct: 207 APAPVYTPAPAPVVEAPVYKTPKLDYYVQSIYFDSDQDVARADQYPNLTAAVNAAHQYSQ 266
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ G+AD + +I L RR V Y V G+SA R + G P
Sbjct: 267 DQVKLLGNADTDANPQYNIGLSERRVQYVAQYLVNNGVSADRFIGIANGDTKPVATNSTA 326
Query: 141 DAYAKNRRAIVFL 153
A+NRR V++
Sbjct: 327 AGKAENRRVDVYI 339
>gi|296282963|ref|ZP_06860961.1| outer membrane protein [Citromicrobium bathyomarinum JL354]
Length = 214
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 3/132 (2%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDF 83
D + + + E Q+ + D V F T+S +I P+ + L + + +
Sbjct: 70 DEQTAGSGVDVEEIGDQDAILVRLPDGVTFATNSANINPSFQRTLDTVAQSMIRYPNSLI 129
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE--MPSVYGHDED 141
+ G D GS + + L +RA AV NY V++G+S +R+ YG++ V D
Sbjct: 130 DVYGFTDTTGSPSYNQQLSEQRAQAVANYLVSQGVSRARIATRGYGEDPQYLRVRTGDNV 189
Query: 142 AYAKNRRAIVFL 153
NRR + +
Sbjct: 190 NEPLNRRVEIKI 201
>gi|42528265|ref|NP_973363.1| flagellar motor protein MotB [Treponema denticola ATCC 35405]
gi|4426946|gb|AAD20620.1| flagellar motor protein MotB [Treponema denticola]
gi|41819535|gb|AAS13282.1| flagellar motor rotation protein B [Treponema denticola ATCC 35405]
gi|325474545|gb|EGC77731.1| flagellar motor protein MotB [Treponema denticola F0402]
Length = 239
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 44/127 (34%), Gaps = 8/127 (6%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRP-ADIQVLSNLGSWLEKHD---CDFLIEGHAD 90
+ +S + S+ VFF S + L NL +L D F +EGH D
Sbjct: 107 IAVTSDERGIVISLASDVFFYPGSAELNIAESRDTLLNLAQFLSSQDLASYRFRVEGHTD 166
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ S+ L RA + + G SR V Y P + A N
Sbjct: 167 SGVTDPNVWKSNWELSSARAINILHSLTDFGAQESRFSVAGYADTRPIFSNDTAEGRAYN 226
Query: 147 RRAIVFL 153
RR + +
Sbjct: 227 RRVDIII 233
>gi|54302322|ref|YP_132315.1| outer membrane protein OmpA [Photobacterium profundum SS9]
gi|46915744|emb|CAG22515.1| hypothetical outer membrane protein OmpA [Photobacterium profundum
SS9]
Length = 324
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 37/101 (36%), Gaps = 2/101 (1%)
Query: 54 FDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F S ++ DI L + + + + + GH D G+ + L RA V Y
Sbjct: 215 FAFDSDTLSQQDIDQLQPIAQRLVNFPETELFVIGHTDSRGAEAYNQNLSEERAAVVAGY 274
Query: 113 FVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
R++ G+ P ED +NRR VF
Sbjct: 275 LATHFGIEQSRIQAQGRGELEPVATNDTEDGRGQNRRVEVF 315
>gi|256828401|ref|YP_003157129.1| peptidoglycan-associated lipoprotein [Desulfomicrobium baculatum
DSM 4028]
gi|256577577|gb|ACU88713.1| peptidoglycan-associated lipoprotein [Desulfomicrobium baculatum
DSM 4028]
Length = 179
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 23/175 (13%)
Query: 1 MQYSTIFIILSAITMMSISG-IDNLDTKI------------SSPDTVLNESSLQEQFSSS 47
M+ +F ++ + ++++G + S L L+ Q +
Sbjct: 1 MKKLGVFGLIVLVFCLAMAGGCSKKVSSTPAGATAAGAGDGSGAQGGLTAEQLEAQRLAE 60
Query: 48 VG---------DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNS 97
+ D ++F S + QVL++ L+ + LIEGH DE G+
Sbjct: 61 LQRQAIEKIGADKIYFAFDSNELTQESRQVLTDKAELLKANPALSLLIEGHCDERGTNEY 120
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
++ALG RRA A + + V GI +S++++ SYG+E P+V G +EDA+ KNRR
Sbjct: 121 NLALGERRARAAYEFLVLLGIDSSKLQIISYGEEYPAVQGSNEDAWGKNRRDEFK 175
>gi|289641193|ref|ZP_06473360.1| OmpA/MotB domain protein [Frankia symbiont of Datisca glomerata]
gi|289508955|gb|EFD29887.1| OmpA/MotB domain protein [Frankia symbiont of Datisca glomerata]
Length = 226
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 42/120 (35%), Gaps = 6/120 (5%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALG 102
++ V F S ++ A + L + + L + + G+ D G+ ++ L
Sbjct: 107 GVVVTISSDVLFAFDSANLTKAAREQLDGIAAQLGRVTGTITVNGYTDSTGTPAYNVILS 166
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG------HDEDAYAKNRRAIVFLKGC 156
+RA AV N + + T +G P + +NRR + +
Sbjct: 167 QQRANAVANLLRPKAPPGVLVSATGHGAANPVAPNTNSDGSDNSAGRGQNRRVSIIYRTS 226
>gi|229062194|ref|ZP_04199517.1| OmpA/MotB domain protein [Bacillus cereus AH603]
gi|229169237|ref|ZP_04296950.1| OmpA/MotB domain protein [Bacillus cereus AH621]
gi|228614220|gb|EEK71332.1| OmpA/MotB domain protein [Bacillus cereus AH621]
gi|228717088|gb|EEL68766.1| OmpA/MotB domain protein [Bacillus cereus AH603]
Length = 233
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 18/120 (15%), Positives = 43/120 (35%), Gaps = 6/120 (5%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSS 98
++ ++ ++V FD+ ++ + + + + + + + GH D + N+
Sbjct: 106 TEKGLMVTILENVLFDSGKADVKLESLGIAKEMSNLLVSASPREITVSGHTDTVPIANAQ 165
Query: 99 IALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
A R + + + + YG+ + AKNRR VF+
Sbjct: 166 FASNWELSTQRAVNFMQVLLQNKDLQPEKFSAIGYGEYRSIAPNDTPEGKAKNRRVEVFI 225
>gi|167622915|ref|YP_001673209.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis
HAW-EB4]
gi|167352937|gb|ABZ75550.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4]
Length = 356
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 64/144 (44%), Gaps = 2/144 (1%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
+ + +T ++ P+ ++ + ++ ++ FD S + + +
Sbjct: 209 SATKAQPPVKETPVTLPEKIIPVTP-KQIVLPALTVISLFDFDSSELTH-SGSLAPVIER 266
Query: 75 WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
+ + I+G+ D G+ + AL RRA AV +Y +A GI +++V YG++ P
Sbjct: 267 LKQSPEAIANIKGYTDSKGNATYNQALSERRAQAVADYLIAAGIKPEQIEVHGYGEQFPL 326
Query: 135 VYGHDEDAYAKNRRAIVFLKGCRA 158
+ + +NRR ++ ++ +
Sbjct: 327 MKNDTPEHRHENRRVLIHIQSTTS 350
>gi|110806727|ref|YP_690247.1| putative outer membrane lipoprotein [Shigella flexneri 5 str. 8401]
gi|110616275|gb|ABF04942.1| putative outer membrane protein [Shigella flexneri 5 str. 8401]
Length = 160
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 55/149 (36%), Gaps = 3/149 (2%)
Query: 8 IILSAITMMSISGIDNL-DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADI 66
+I +++ + + + + +S + D++ F + Y + P
Sbjct: 9 LIFTSLILTGCQSPQGKFTPEQVAAMQSYGFTESAGDWSLGLSDAILFAKNDYKLLPESQ 68
Query: 67 QVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMK 124
Q + + + L ++GH D G + + L L+RA V + +V G +
Sbjct: 69 QQIQTMAAKLASTGLTHARMDGHTDNYGEDSYNEGLSLKRANVVADAWVIGGQIPRSNLT 128
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
GK+ P A+NRR V +
Sbjct: 129 TQGLGKKYPIASNKTAQGRAENRRVAVVI 157
>gi|323343250|ref|ZP_08083477.1| OmpA family protein [Prevotella oralis ATCC 33269]
gi|323095069|gb|EFZ37643.1| OmpA family protein [Prevotella oralis ATCC 33269]
Length = 287
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 45/114 (39%), Gaps = 6/114 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD----ELGSRNSSIA 100
S+ D++ + + SY I LS + ++ D D LIEG+ D + ++
Sbjct: 157 ISLADNMLYKSGSYEINDRAQTTLSKIAKIIMDYKDYDVLIEGNTDNVPISRENIRNNWD 216
Query: 101 LGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V Y + R+ G+ P E +NRR + +
Sbjct: 217 LSCLRASSVVQYLQNHYGVDPKRLTAGGRGEYNPIASNGTEVGRQRNRRTQIII 270
>gi|302874600|ref|YP_003843233.1| OmpA/MotB domain-containing protein [Clostridium cellulovorans
743B]
gi|307690789|ref|ZP_07633235.1| OmpA/MotB domain-containing protein [Clostridium cellulovorans
743B]
gi|302577457|gb|ADL51469.1| OmpA/MotB domain protein [Clostridium cellulovorans 743B]
Length = 236
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 3/116 (2%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS---RNS 97
+ + + + + FD+ I+ L+ + + IEGH D + +
Sbjct: 114 ERGINIELNEKILFDSGKAEIKTDFATTLNKISEIIASIGNLIEIEGHTDNVPISGVYKN 173
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA +V YF +RGIS +RM +YG+ P + A+NRR + +
Sbjct: 174 NRDLSYARANSVLEYFASRGISQNRMVTKAYGEWYPIKPNDSDANRAENRRVNILI 229
>gi|325981317|ref|YP_004293719.1| peptidoglycan-associated lipoprotein [Nitrosomonas sp. AL212]
gi|325530836|gb|ADZ25557.1| peptidoglycan-associated lipoprotein [Nitrosomonas sp. AL212]
Length = 174
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/177 (21%), Positives = 75/177 (42%), Gaps = 24/177 (13%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNE--------------------SSL 40
M+ + ++ I ++S + + S L
Sbjct: 1 MRK---LLCIALIVLLSACASQTTQPDVDDLSSGAGNGNDLSGSDLMGSDSGRPSYFSQL 57
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSI 99
+ S SVF+D SY+++ +++ + +L + +++G+ D+ GSR ++
Sbjct: 58 NDPNSILSQRSVFYDFDSYTVKSEYRELVLSHARFLRDNPAASVILQGNTDDRGSREYNL 117
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
ALG RRA +V N + G +++ S G+E P GH E +++NRR + +G
Sbjct: 118 ALGQRRADSVKNMMILSGAQDLQIESVSLGEEKPRALGHGESTWSQNRRTDILYRGE 174
>gi|150025563|ref|YP_001296389.1| lipoprotein YiaD precursor [Flavobacterium psychrophilum JIP02/86]
gi|149772104|emb|CAL43580.1| Probable lipoprotein YiaD precursor [Flavobacterium psychrophilum
JIP02/86]
Length = 231
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVG-DSVFFDTSSYSIRPADIQVLSNLGS-WLEKH 79
D KIS + E +G +++ FDT+ ++ + L L + E
Sbjct: 82 DKQARKISESLPGAKVERVGEGIRLVLGENAIRFDTNKSTLTASAKANLDKLVKVFTEYP 141
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
D D I G+ D G+ + ++ L +RA +V Y A+G++++R + G+ P
Sbjct: 142 DTDIQIYGYTDSSGADDYNLKLSEQRAASVKTYLSAKGLASTRFNTSGLGEADPIAPNET 201
Query: 140 EDAYAKNRRAIVFL 153
D ++NRR +
Sbjct: 202 ADGKSQNRRVEFAI 215
>gi|78221995|ref|YP_383742.1| OmpA/MotB [Geobacter metallireducens GS-15]
gi|78193250|gb|ABB31017.1| OmpA/MotB [Geobacter metallireducens GS-15]
Length = 457
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAV 109
+ FD IRP + + +++++ +IEG+ D++GS + ++ L RRA AV
Sbjct: 220 KIEFDIDKADIRPQYKDEVKRVADYMKQYPNTTAVIEGYTDDVGSDDYNMKLSQRRAEAV 279
Query: 110 FNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
N GI SR+ YGK P E KNRR +
Sbjct: 280 VNSLVDDFGIDRSRLSAKGYGKTQPLTSNATEAGKQKNRRIQAVI 324
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDS------VFFDTSSYSIRPADIQVL 69
++ + + K V++ + + + + D + FDT Y+I+P +
Sbjct: 305 LTSNATEAGKQKNRRIQAVIDCTLEDPKVIAKLPDRLCVSLNIQFDTDKYTIKPQYHDEI 364
Query: 70 SNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTS 127
+ +G +++++ +IEGH D +GS + ++ L LRRA +V Y + I SR+
Sbjct: 365 AKVGEFMKQNPTTTAVIEGHTDRVGSYDYNMKLSLRRAESVVTYLADKFGIERSRLSAKG 424
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFL 153
YG P Y D A NRR +
Sbjct: 425 YGYTRPIGYNSDPKGRAMNRRINAII 450
>gi|153949846|ref|YP_001401475.1| OmpA domain-containing protein [Yersinia pseudotuberculosis IP
31758]
gi|152961341|gb|ABS48802.1| OmpA domain protein [Yersinia pseudotuberculosis IP 31758]
Length = 578
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 2/103 (1%)
Query: 53 FFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FD +++ ++L + L + K ++ GH D G ++ L L+RA A+ +
Sbjct: 447 LFDVGKFTLNAGSTKMLVDALMNIRAKPGWLIVVAGHTDITGDAQANHILSLKRAEALRD 506
Query: 112 Y-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +S + V YG P D A NRR + L
Sbjct: 507 WMLSTSDVSPTCFAVQGYGATRPIADNDTPDGRALNRRVEISL 549
>gi|163755848|ref|ZP_02162966.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Kordia algicida OT-1]
gi|161324369|gb|EDP95700.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Kordia algicida OT-1]
Length = 648
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 58/150 (38%), Gaps = 7/150 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD-SVFFDTSSYSIRPADIQVL 69
SA ++ L + + + + ++ ++FD +IRP L
Sbjct: 496 SAEALLPKQEDPGLREVTLLLEKEEVPFEIGDDLAVTLNIPIIYFDFDKSNIRPDAAAEL 555
Query: 70 -SNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
+ + + H D GS + ++AL RR + +Y +++GI ASR+ Y
Sbjct: 556 AKVIAVMKKYPTLKIDVRSHTDSRGSDSYNMALSQRRNQSTRDYIISKGIDASRLTGRGY 615
Query: 129 GKEMPSVYGHD-----EDAYAKNRRAIVFL 153
G+ + E+ + NRR+ +
Sbjct: 616 GETRHVNKCSNGVKCSEEEHQLNRRSEFIV 645
>gi|42783685|ref|NP_980932.1| flagellar motor protein MotB [Bacillus cereus ATCC 10987]
gi|42739614|gb|AAS43540.1| sodium-driven polar flagellar protein PomB, putative [Bacillus
cereus ATCC 10987]
Length = 261
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 18/120 (15%), Positives = 44/120 (36%), Gaps = 6/120 (5%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSS 98
++ ++ ++V FD+ ++ + + + + + + + GH D + N+
Sbjct: 134 TEKGLKVTILENVLFDSGKADVKLESLSIAKEMSNLLVSASPREITVSGHTDNVPIANAQ 193
Query: 99 IALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
A R + + + + YG+ ++ AKNRR VF+
Sbjct: 194 FASNWELSTQRAVNFMQVLLQNKELQPGKFSAVGYGEYRSIAPNDTQEGKAKNRRVEVFI 253
>gi|228474110|ref|ZP_04058851.1| OmpA/MotB domain protein [Capnocytophaga gingivalis ATCC 33624]
gi|228274624|gb|EEK13465.1| OmpA/MotB domain protein [Capnocytophaga gingivalis ATCC 33624]
Length = 668
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYA 108
+ ++FD +IRP L+ + +++H I+ H D GS ++AL RRA +
Sbjct: 556 EIIYFDFDKSNIRPDAAVDLAKIVEVMKEHPTIKIAIKSHTDSRGSDAYNLALSDRRAKS 615
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHD-----EDAYAKNRRAIVFL 153
+ V +GI SR+ YG+ + E+ + KNRR+ +
Sbjct: 616 TLEWMVQQGIDRSRLTAKGYGETQLVNGCSNGVPCSEEEHQKNRRSEFII 665
>gi|261342404|ref|ZP_05970262.1| OmpA family protein [Enterobacter cancerogenus ATCC 35316]
gi|288315039|gb|EFC53977.1| OmpA family protein [Enterobacter cancerogenus ATCC 35316]
Length = 451
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
L+ Q+Q + F + S ++P ++V+ + S + + + D +I GH D
Sbjct: 327 LSVDESQKQSKVVLKGDALFLSGSVRVQPEMVKVIERIASEVRRVNGDVVIVGHTDATPI 386
Query: 95 RNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
+ L +RA V YF++ G+ S++KV G P AKNRR
Sbjct: 387 SRPGLPNNVVLSEKRAAEVAQYFISAGLPESKVKVRGVGSSQPVASDATAQGRAKNRRVE 446
Query: 151 VFL 153
F+
Sbjct: 447 FFV 449
>gi|209695194|ref|YP_002263123.1| outer membrane protein, OmpA family [Aliivibrio salmonicida
LFI1238]
gi|208009146|emb|CAQ79386.1| outer membrane protein, OmpA family [Aliivibrio salmonicida
LFI1238]
Length = 355
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Query: 56 TSSYSIRPADIQVL-SNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
S S ++L + + I GH D +GS + +L +RA +V YF+
Sbjct: 238 FDSNSTTITKPELLDPFIARLHYYSESTLSIIGHTDAIGSEAYNQSLSEKRAESVAKYFI 297
Query: 115 ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
GIS +R+ G++ P + ++ NRR +
Sbjct: 298 KSGISNNRISTQGRGEKDPIAPNNTQNGRYLNRRVEL 334
>gi|89890649|ref|ZP_01202159.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
gi|89517564|gb|EAS20221.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
Length = 663
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 42/111 (37%), Gaps = 6/111 (5%)
Query: 51 SVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
++FD ++IRP LS + I H D + L +RA +
Sbjct: 545 DIYFDFDRFNIRPDAALELSKILAFMELYPQTSVEIRSHTDSRAPDAYNDVLSEKRAQST 604
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGH-----DEDAYAKNRRAIVFLKG 155
+ + +GISASR+ YG+ + + NRR+ + G
Sbjct: 605 RKWLIEKGISASRLTAKGYGERQLVNNCSNGVDCTPEEHQLNRRSEFIVTG 655
>gi|121608000|ref|YP_995807.1| OmpA domain-containing protein [Verminephrobacter eiseniae EF01-2]
gi|121552640|gb|ABM56789.1| OmpA domain protein [Verminephrobacter eiseniae EF01-2]
Length = 182
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/151 (25%), Positives = 67/151 (44%), Gaps = 1/151 (0%)
Query: 5 TIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPA 64
LS + + L + + + V+FD SY I+P
Sbjct: 32 KTASTLSGEANAGGNTGNAAQGSGGVAGVDLTQPARDTAGPVGIARIVYFDYDSYVIKPE 91
Query: 65 DIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
++ +++ ++EGH DE G R +++LG +RA AV G+ S+M
Sbjct: 92 FQTLIEAHSRFIKTDTKRKLMLEGHTDERGGREYNLSLGQKRAEAVRRALGLLGVPDSQM 151
Query: 124 KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ S+GKE +V GH E+A+A+NRR + +
Sbjct: 152 EAVSFGKEKLAVQGHTEEAHAQNRRVEMTYR 182
>gi|90022860|ref|YP_528687.1| flagellar motor protein MotB [Saccharophagus degradans 2-40]
gi|89952460|gb|ABD82475.1| OmpA/MotB [Saccharophagus degradans 2-40]
Length = 329
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 5/106 (4%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSIALGLRRAYAV 109
F + S + VL + S L ++GH D + S+ AL R+ +V
Sbjct: 180 FVSGSADLSVELKDVLKEVKSVLALRQGKIEVQGHTDNVPIRSARFGSNWALSSARSVSV 239
Query: 110 FNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ +A G A R +V Y MP V + A NRR + +K
Sbjct: 240 AHELMAGGDIAERRFEVAGYADTMPIVPNDSAENRAINRRVEILIK 285
>gi|15606305|ref|NP_213684.1| flagellar motor protein MotB [Aquifex aeolicus VF5]
gi|2983507|gb|AAC07084.1| flagellar motor protein MotB [Aquifex aeolicus VF5]
Length = 235
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 36/120 (30%), Gaps = 5/120 (4%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----R 95
E V FF ++ ++ L L+ + IEGH D
Sbjct: 113 TGECLRIRVNTDKFFPPGEDTLMKEAKGLILGLCYKLKPYALPVDIEGHTDNRPISTPRF 172
Query: 96 NSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
S+ L + RA +V F ++ Y P KNRR +K
Sbjct: 173 PSNWELSMARAISVIEVFEKECGYPSDKLSALGYADTKPIASNDTPQGRQKNRRVEFCVK 232
>gi|300940943|ref|ZP_07155467.1| OmpA family protein [Escherichia coli MS 21-1]
gi|300454267|gb|EFK17760.1| OmpA family protein [Escherichia coli MS 21-1]
Length = 160
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 54/149 (36%), Gaps = 3/149 (2%)
Query: 8 IILSAITMMSISGIDNL-DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADI 66
+I +++ + + + + +S + D++ F + Y + P
Sbjct: 9 LIFTSLILTGCQSPQGKFTPEQVAAMQSYGFTESAGDWSLGLSDAILFAKNDYKLLPESQ 68
Query: 67 QVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMK 124
Q + + + L ++GH D G + + L L+RA V + + G +
Sbjct: 69 QQIQTMAAKLASTGLTHARMDGHTDNYGEDSYNEVLSLKRANVVADAWAMGGQIPRSNLT 128
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
GK+ P A+NRR V +
Sbjct: 129 TQGLGKKYPIASNKTAQGRAENRRVAVVI 157
>gi|229160692|ref|ZP_04288684.1| OmpA/MotB domain protein [Bacillus cereus R309803]
gi|228622707|gb|EEK79541.1| OmpA/MotB domain protein [Bacillus cereus R309803]
Length = 226
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 53/127 (41%), Gaps = 5/127 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ +N S + D++ FDT S++P +++S L + + ++EGH D
Sbjct: 99 SQVNVYREDTGVSIVIVDNLIFDTGDASVKPEAKEIISQLVGFFQSVPNPIVVEGHTDSR 158
Query: 93 GSRNS----SIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
N + L RA + ++ + + R+ Y P V + KNR
Sbjct: 159 PIHNEKFPSNWELSSARAANMIHHLIEVYHVDDKRLAAVGYADTKPVVPNDSPQNWEKNR 218
Query: 148 RAIVFLK 154
R ++++K
Sbjct: 219 RVVIYIK 225
>gi|124266540|ref|YP_001020544.1| putative peptidoglycan-associated lipoprotein [Methylibium
petroleiphilum PM1]
gi|124259315|gb|ABM94309.1| putative peptidoglycan-associated lipoprotein precursor
[Methylibium petroleiphilum PM1]
Length = 179
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/123 (33%), Positives = 64/123 (52%), Gaps = 1/123 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGH 88
+ + + L Q + ++G V+FD S+ ++ ++ N +IEGH
Sbjct: 54 TSQSQVANVDLSAQQAGALGKVVYFDFDSFLVKDEYRPIVDNYSKVLNSDRKKRVVIEGH 113
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
DE G R ++ALG +RA AV G+ +++ SYGKE P+V G DE A+AKNRR
Sbjct: 114 TDERGGREYNLALGQKRAEAVAKSLTLLGVQDGQIESVSYGKERPAVTGSDEAAWAKNRR 173
Query: 149 AIV 151
A +
Sbjct: 174 AEL 176
>gi|229019729|ref|ZP_04176535.1| OmpA/MotB domain protein [Bacillus cereus AH1273]
gi|229025955|ref|ZP_04182345.1| OmpA/MotB domain protein [Bacillus cereus AH1272]
gi|228735356|gb|EEL85961.1| OmpA/MotB domain protein [Bacillus cereus AH1272]
gi|228741574|gb|EEL91768.1| OmpA/MotB domain protein [Bacillus cereus AH1273]
Length = 234
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 19/131 (14%), Positives = 46/131 (35%), Gaps = 6/131 (4%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEG 87
+ + ++ ++ ++V FD+ ++ + + L + + + + G
Sbjct: 96 NQLSSAFQTKLTEKGLMVTILENVLFDSGKADVKLESLGIAKELSNLLVSASPREITVSG 155
Query: 88 HADELGSRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
H D + N+ A R + + + + YG+ ++
Sbjct: 156 HTDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSTIGYGEYRSIAPNDTQEG 215
Query: 143 YAKNRRAIVFL 153
AKNRR VF+
Sbjct: 216 KAKNRRVEVFI 226
>gi|149375118|ref|ZP_01892890.1| OmpA/MotB domain protein [Marinobacter algicola DG893]
gi|149360482|gb|EDM48934.1| OmpA/MotB domain protein [Marinobacter algicola DG893]
Length = 192
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 69/136 (50%), Gaps = 1/136 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
G+ + + ++ E+ + + +FD + I+ +VL +L+ +
Sbjct: 57 GVSSSEMSEEQRREAEARAARAEEAAMREITTFYFDFDTAEIKAEAREVLVAHARFLQAN 116
Query: 80 DC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ IEGHADE G++ ++ALG RRA A+ + + G S + + SYG+E P+V G
Sbjct: 117 PGQNVRIEGHADERGTKEYNLALGERRANAIERFLIVNGASRGQTETISYGEEKPAVMGS 176
Query: 139 DEDAYAKNRRAIVFLK 154
E A+A+NRR + +
Sbjct: 177 SESAWAQNRRVELVFQ 192
>gi|90415360|ref|ZP_01223294.1| flagellar motor protein [marine gamma proteobacterium HTCC2207]
gi|90332683|gb|EAS47853.1| flagellar motor protein [marine gamma proteobacterium HTCC2207]
Length = 408
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 49/132 (37%), Gaps = 6/132 (4%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
+ + ++ + + F + ++P+ +L +G + IEGH D
Sbjct: 277 AEGLAEVDRDGDKIVVRLAERGSFRSGYADLQPSFKPLLDKVGESITDGSSLITIEGHTD 336
Query: 91 ELGS-----RNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+ S+ L R+ AV +Y + I R+ VT P V + +
Sbjct: 337 NIPMAFSERFRSNWDLSAARSAAVADYLLNSSEIDDGRVSVTGLADTKPLVPNDSPEGRS 396
Query: 145 KNRRAIVFLKGC 156
KNRR V + G
Sbjct: 397 KNRRIEVIIDGS 408
>gi|256820527|ref|YP_003141806.1| OmpA/MotB domain-containing protein [Capnocytophaga ochracea DSM
7271]
gi|256582110|gb|ACU93245.1| OmpA/MotB domain protein [Capnocytophaga ochracea DSM 7271]
Length = 660
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 6/110 (5%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYA 108
D+++FD +IRP + L+ + +E++ + H D GS + ++AL RRA +
Sbjct: 548 DNIYFDYDKANIRPDAAEQLAKIVKVMEEYPTMKIDVRLHTDSRGSDSYNLALSQRRAKS 607
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGH-----DEDAYAKNRRAIVFL 153
+ +A GI R+ YG+ E+ + NRR+ +
Sbjct: 608 TIKWLIAHGIHKDRITGKGYGETQLVNGCSNGVPCTEEQHQANRRSEFII 657
>gi|149372847|ref|ZP_01891868.1| OmpA family protein [unidentified eubacterium SCB49]
gi|149354544|gb|EDM43109.1| OmpA family protein [unidentified eubacterium SCB49]
Length = 235
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 70/136 (51%), Gaps = 4/136 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDS--VFFDTSSYSIRPADIQVLSNLGSWLEKH 79
D +I S + + + ++ V+FDT+ Y+I A Q L L L+++
Sbjct: 84 DKQAQEIESEIPGAEVERVDDGIVITFDENSGVYFDTAKYNINTASQQNLDKLAGVLQEY 143
Query: 80 -DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYG 137
D + L+ GH D +GS +S++ L RRA AV NYF + +G+S+SR YG++ P
Sbjct: 144 VDTNVLVVGHTDSVGSEDSNMLLSQRRAQAVTNYFTSTKGLSSSRFTTNWYGEQTPVGDN 203
Query: 138 HDEDAYAKNRRAIVFL 153
+ A+NRR + +
Sbjct: 204 ATPEGRAQNRRVNIVI 219
>gi|172063966|ref|YP_001811617.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6]
gi|171996483|gb|ACB67401.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6]
Length = 170
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 47/118 (39%), Gaps = 1/118 (0%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRN 96
+ F + FD Y+++P +++ +G L + + G++D+ G+
Sbjct: 51 QETGQGFEFGSSGPILFDFDRYNLKPDVRRIVERIGRTLRSAGINGVRVYGYSDDEGTVA 110
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L RRA V V G+ R+ V GK P A+NRRA + +
Sbjct: 111 YDRELSRRRAEVVAIELVDVGLDGKRVAVIGKGKSDPVGDNRTPTGRAQNRRAAIVVS 168
>gi|51245063|ref|YP_064947.1| outer membrane porin F [precursor] [Desulfotalea psychrophila
LSv54]
gi|50876100|emb|CAG35940.1| related to outer membrane porin F [Precursor] [Desulfotalea
psychrophila LSv54]
Length = 241
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC---DFLIEGHADELGSRNSSIALGLRRAY 107
V FD +S +R + +L+ L LE I+GH D G+ + ++ L RA
Sbjct: 130 KVEFDLNSARLRRSAYPLLAELARALEDERVVEHQVCIKGHTDSAGAGSYNLQLSYSRAN 189
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV +Y G+S +++V YG+ MP V E NRR V L
Sbjct: 190 AVRDYLAGAGMSVDKLEVFGYGENMPLVTNSSEANRQLNRRVEVSL 235
>gi|332524171|ref|ZP_08400398.1| outer membrane protein, ompa family [Rubrivivax benzoatilyticus
JA2]
gi|332107507|gb|EGJ08731.1| outer membrane protein, ompa family [Rubrivivax benzoatilyticus
JA2]
Length = 178
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 58/148 (39%), Gaps = 11/148 (7%)
Query: 17 SISGIDNLDTKISSPDTVLNES----------SLQEQFSSSVGDSVFFDTSSYSIRPADI 66
+++G + + E + + + ++ F+ + + P I
Sbjct: 28 AVAGCQTVPPAAPPRPSFSPEQVRTLQGLGFRPEGDDWQLDLSMALLFEFDADRLAPLQI 87
Query: 67 QVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
+ L LG E +EGH D +G+ + + AL LRRA +V G A+ ++V
Sbjct: 88 ERLGRLGRELAEAGIHRMHVEGHTDNVGAASYNQALSLRRAASVARALSGAGFDAAGLQV 147
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G P +E A+NRR + +
Sbjct: 148 RGLGAARPIADNTNEAGRARNRRVTLIV 175
>gi|332519230|ref|ZP_08395697.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
gi|332045078|gb|EGI81271.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
Length = 235
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 3/138 (2%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDS--VFFDTSSYSIRPADIQVLSN-LGSW 75
S +D KI + + + ++ V+FDT+ Y+I A LS +G +
Sbjct: 81 SKMDKQAQKIEEEIPGAEVERVDDGIVVTFDENSGVYFDTAKYNINAASQATLSKLIGVF 140
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
E D + L+ GH D +GS +S++ L RAYAV NY +GIS +R+ +G+ P+
Sbjct: 141 REYPDTNILVVGHTDSVGSEDSNMTLSKNRAYAVTNYLTNQGISNARVTTNWFGEGQPTN 200
Query: 136 YGHDEDAYAKNRRAIVFL 153
++ AKNRR + +
Sbjct: 201 DNSTKEGRAKNRRVNIAI 218
>gi|309782736|ref|ZP_07677457.1| OmpA family protein [Ralstonia sp. 5_7_47FAA]
gi|308918514|gb|EFP64190.1| OmpA family protein [Ralstonia sp. 5_7_47FAA]
Length = 274
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 1/104 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
+ F+T S ++ P +L + + + I GH D GSR ++ L RA
Sbjct: 167 NRIIEFETGSATLTPKGRAILDEMAAVLPRLNGRKIEIVGHTDNSGSRALNLNLSQARAE 226
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
V NY +A+G + G + P + ++ ++NRR
Sbjct: 227 TVKNYLIAKGAEQGTLTAMGVGPDQPVAANNTDEGRSRNRRIEF 270
>gi|77918775|ref|YP_356590.1| MotB-like flagellar protein [Pelobacter carbinolicus DSM 2380]
gi|77544858|gb|ABA88420.1| MotB-like flagellar protein [Pelobacter carbinolicus DSM 2380]
Length = 247
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 47/116 (40%), Gaps = 4/116 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNS---SIA 100
V D++ FD S ++P + +L + ++ IEGH D N +
Sbjct: 112 VILRVKDAILFDAGSTELKPTALPILREVAGLVKPLPLLLRIEGHTDNQKPANPAITNWD 171
Query: 101 LGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+ ++RA AV +F + R+ YG + P G + A NRR L+
Sbjct: 172 ISVQRAVAVLKFFAGEDLLPLDRLSAVGYGDQRPVAPGLGPEQQALNRRVEFVLEN 227
>gi|115359182|ref|YP_776320.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD]
gi|115284470|gb|ABI89986.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
Length = 170
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 47/118 (39%), Gaps = 1/118 (0%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRN 96
+ F + FD Y+++P +++ +G L + + G++D+ G+
Sbjct: 51 QETGQGFEFGSSGPILFDFDRYNLKPDVRRIVERIGRTLRSAGINGVRVYGYSDDEGTVA 110
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L RRA V V G+ R+ V GK P A+NRRA + +
Sbjct: 111 YDRELSRRRAEVVAIELVDVGLDGKRVAVIGKGKSDPVGDNRTPTGRAQNRRAAIVVS 168
>gi|229135343|ref|ZP_04264134.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST196]
gi|228648118|gb|EEL04162.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST196]
Length = 234
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 18/128 (14%), Positives = 44/128 (34%), Gaps = 6/128 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+ ++ ++ ++V FD+ ++ + + + + + + + GH D
Sbjct: 99 SSSFQTKLTEKGLMLTILENVLFDSGKADVKLESLGIAKEMSNLLVSASPREITVSGHTD 158
Query: 91 ELGSRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ N+ A R + + + + YG+ + AK
Sbjct: 159 TVPIANAQFASNWELSTQRAVNFMQVLLQNKDLQPEKFSAIGYGEYRSIAPNDTPEGKAK 218
Query: 146 NRRAIVFL 153
NRR VF+
Sbjct: 219 NRRVEVFI 226
>gi|126729072|ref|ZP_01744886.1| OmpA/MotB [Sagittula stellata E-37]
gi|126710062|gb|EBA09114.1| OmpA/MotB [Sagittula stellata E-37]
Length = 297
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 44/111 (39%), Gaps = 2/111 (1%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALG 102
++ +V F S + P L L + + + F + GH D GS ++ L
Sbjct: 185 LRFTLDGAVLFAHDSSDLMPDAKAALDELAAQIADANLSAFRVVGHTDATGSDAYNLTLS 244
Query: 103 LRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
RA AV +Y+ + + + + G+ P E+ +NRR +
Sbjct: 245 QERAAAVRDYYASMDVLTNVSISSEGRGESNPLASNETEEGREQNRRVEII 295
>gi|52140989|ref|YP_085838.1| flagellar motor protein MotB [Bacillus cereus E33L]
gi|51974458|gb|AAU16008.1| chemotaxis motB protein (Motility protein B) [Bacillus cereus E33L]
Length = 262
Score = 71.8 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 45/130 (34%), Gaps = 6/130 (4%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGH 88
+ ++ ++ ++V FD+ ++ + + + S + + + GH
Sbjct: 125 QLSSSFQTKLTEKGLMVTILENVLFDSGKADVKLESLGIAKEMSSLLVSASPREITVSGH 184
Query: 89 ADELGSRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
D + NS A R + + + + YG+ ++
Sbjct: 185 TDNVPIANSQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAIGYGEYRSIAPNDTQEGK 244
Query: 144 AKNRRAIVFL 153
AKNRR VF+
Sbjct: 245 AKNRRVEVFI 254
>gi|321472579|gb|EFX83548.1| hypothetical protein DAPPUDRAFT_239461 [Daphnia pulex]
Length = 193
Score = 71.4 bits (173), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 5/136 (3%)
Query: 17 SISGIDNLDTKISS----PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL 72
+ + D +S D F ++V D VF+ Y + P VL
Sbjct: 42 ATCECGDSDEATTSGQGCMDVSGPTPGTAADFVTNVEDRVFYGFDRYDLAPESRAVLEKQ 101
Query: 73 GSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
+WL + + + + G+ D G+ + LG RRA A +Y + G+ A R+ SYGK
Sbjct: 102 AAWLLKYPEREAEVAGYCDVRGTVEYNDKLGQRRADAARDYLTSLGVHAGRLSTISYGKR 161
Query: 132 MPSVYGHDEDAYAKNR 147
+ V GH E+ YA+NR
Sbjct: 162 ITLVPGHTEEIYAQNR 177
>gi|320015664|gb|ADV99235.1| putative exported protein [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 578
Score = 71.4 bits (173), Expect = 3e-11, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 2/103 (1%)
Query: 53 FFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FD +++ ++L L K ++ GH D G ++ L L+RA A+ +
Sbjct: 447 LFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTDITGDAQANHILSLKRAEALRD 506
Query: 112 Y-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +S + V YG P D A NRR + L
Sbjct: 507 WMLSTSDVSPTCFAVQGYGATRPIADNDTPDGRALNRRVEISL 549
>gi|281179819|dbj|BAI56149.1| conserved hypothetical protein [Escherichia coli SE15]
Length = 550
Score = 71.4 bits (173), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 2/126 (1%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGH 88
P+ ++ ++ + + FD ++ +VL + L + K L+ G+
Sbjct: 414 PPEQKMDVTASLPVQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGY 473
Query: 89 ADELGSRNSSIALGLRRAYAVFNY-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
D G S+ L LRRA AV N+ I A+ V G+ P+ A NR
Sbjct: 474 TDATGDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNR 533
Query: 148 RAIVFL 153
R + L
Sbjct: 534 RVEISL 539
>gi|223936109|ref|ZP_03628023.1| OmpA/MotB domain protein [bacterium Ellin514]
gi|223895331|gb|EEF61778.1| OmpA/MotB domain protein [bacterium Ellin514]
Length = 280
Score = 71.4 bits (173), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 5/121 (4%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRN 96
S+L+ + + ++ D V FD+ +++P VL + + L H + GH D + RN
Sbjct: 123 SNLKGKLTVNILDRVMFDSGEAAVKPDGESVLRKIATILAGHPELKIQVIGHTDNVPIRN 182
Query: 97 S---SIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ L RA A ++ + + R+ YG+ P + A+NRR +
Sbjct: 183 RFASNWELSAARAIAAVHFITEKAGVDPRRVGAAGYGEYRPIADNSTAEGRARNRRIAIT 242
Query: 153 L 153
+
Sbjct: 243 I 243
>gi|170724980|ref|YP_001759006.1| OmpA/MotB domain-containing protein [Shewanella woodyi ATCC 51908]
gi|169810327|gb|ACA84911.1| OmpA/MotB domain protein [Shewanella woodyi ATCC 51908]
Length = 229
Score = 71.4 bits (173), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 59/139 (42%), Gaps = 2/139 (1%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL 72
++ ++ N D I+ + + + ++ + V+FD S S+ P +L +
Sbjct: 87 TALLKLA--KNQDVSINCMEYLSSNGLVEFGSGEGLLARVYFDFDSKSLTPESRLILDKV 144
Query: 73 GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
L + + GH D GS + +LGL RA Y +G+ +++K S G+
Sbjct: 145 AKRLVQAPEVIKLVGHTDNSGSEEYNYSLGLLRADNAQTYLNKQGVRDTQLKSESQGETR 204
Query: 133 PSVYGHDEDAYAKNRRAIV 151
P + D A NRR +
Sbjct: 205 PIASNENLDGRALNRRVEL 223
>gi|114563544|ref|YP_751057.1| OmpA/MotB domain-containing protein [Shewanella frigidimarina NCIMB
400]
gi|114334837|gb|ABI72219.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400]
Length = 429
Score = 71.4 bits (173), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 47/121 (38%), Gaps = 4/121 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
L L ++ +G + F + + R +L+ + LE D LI GH D+
Sbjct: 305 LEVEQLSDRVRIRIGATELFASGNTQPRSDFEAILAKIALTLESTDGKILITGHTDDEPI 364
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
S+ L L RA ++ N + R+ G+ P V +E A NRR
Sbjct: 365 FTSKYPSNWHLSLARATSIANVLANSASLSGRLWPEGRGESEPRVVNDNEQNRALNRRIE 424
Query: 151 V 151
+
Sbjct: 425 I 425
>gi|22126581|ref|NP_670004.1| hypothetical protein y2702 [Yersinia pestis KIM 10]
gi|22127241|ref|NP_670664.1| hypothetical protein y3365 [Yersinia pestis KIM 10]
gi|45443207|ref|NP_994746.1| OmpA family membrane protein [Yersinia pestis biovar Microtus str.
91001]
gi|108806286|ref|YP_650202.1| OmpA family membrane protein [Yersinia pestis Antiqua]
gi|108812671|ref|YP_648438.1| OmpA-family membrane protein [Yersinia pestis Nepal516]
gi|145597850|ref|YP_001161926.1| OmpA-family membrane protein [Yersinia pestis Pestoides F]
gi|149367019|ref|ZP_01889052.1| putative OmpA-family membrane protein [Yersinia pestis CA88-4125]
gi|218928146|ref|YP_002346021.1| putative OmpA family membrane protein [Yersinia pestis CO92]
gi|229840896|ref|ZP_04461055.1| putative OmpA-family membrane protein [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229842543|ref|ZP_04462698.1| putative OmpA-family membrane protein [Yersinia pestis biovar
Orientalis str. India 195]
gi|229903796|ref|ZP_04518909.1| putative OmpA-family membrane protein [Yersinia pestis Nepal516]
gi|270486867|ref|ZP_06203941.1| OmpA family protein [Yersinia pestis KIM D27]
gi|270487580|ref|ZP_06204654.1| OmpA family protein [Yersinia pestis KIM D27]
gi|294502870|ref|YP_003566932.1| putative OmpA-family membrane protein [Yersinia pestis Z176003]
gi|21959587|gb|AAM86255.1|AE013873_3 hypothetical [Yersinia pestis KIM 10]
gi|21960312|gb|AAM86915.1|AE013938_3 hypothetical [Yersinia pestis KIM 10]
gi|45438075|gb|AAS63623.1| putative OmpA-family membrane protein [Yersinia pestis biovar
Microtus str. 91001]
gi|108776319|gb|ABG18838.1| OmpA-family membrane protein [Yersinia pestis Nepal516]
gi|108778199|gb|ABG12257.1| putative OmpA-family membrane protein [Yersinia pestis Antiqua]
gi|115346757|emb|CAL19641.1| putative OmpA-family membrane protein [Yersinia pestis CO92]
gi|145209546|gb|ABP38953.1| OmpA-family membrane protein [Yersinia pestis Pestoides F]
gi|149290633|gb|EDM40709.1| putative OmpA-family membrane protein [Yersinia pestis CA88-4125]
gi|229679566|gb|EEO75669.1| putative OmpA-family membrane protein [Yersinia pestis Nepal516]
gi|229690853|gb|EEO82907.1| putative OmpA-family membrane protein [Yersinia pestis biovar
Orientalis str. India 195]
gi|229697262|gb|EEO87309.1| putative OmpA-family membrane protein [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|262361491|gb|ACY58212.1| putative OmpA-family membrane protein [Yersinia pestis D106004]
gi|262365418|gb|ACY61975.1| putative OmpA-family membrane protein [Yersinia pestis D182038]
gi|270335371|gb|EFA46148.1| OmpA family protein [Yersinia pestis KIM D27]
gi|270336084|gb|EFA46861.1| OmpA family protein [Yersinia pestis KIM D27]
gi|294353329|gb|ADE63670.1| putative OmpA-family membrane protein [Yersinia pestis Z176003]
gi|320013943|gb|ADV97514.1| putative OmpA-family membrane protein [Yersinia pestis biovar
Medievalis str. Harbin 35]
Length = 578
Score = 71.4 bits (173), Expect = 3e-11, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 2/103 (1%)
Query: 53 FFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FD +++ ++L L K ++ GH D G ++ L L+RA A+ +
Sbjct: 447 LFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTDITGDAQANHILSLKRAEALRD 506
Query: 112 Y-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +S + V YG P D A NRR + L
Sbjct: 507 WMLSTSDVSPTCFAVQGYGATRPIADNDTPDGRALNRRVEISL 549
>gi|294663979|ref|ZP_06729397.1| OmpA family outer membrane lipoprotein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292606252|gb|EFF49485.1| OmpA family outer membrane lipoprotein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 144
Score = 71.4 bits (173), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 45/123 (36%), Gaps = 7/123 (5%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRN 96
+ ++ D + FD IR +VL L + + D + GH D GS +
Sbjct: 22 PGTPCGYLITLNDRILFDFDKSDIRADAARVLDTLGAALTKVTAKDMQVRGHTDAKGSDD 81
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG-----HDEDAYAKNRRAIV 151
+ AL RRA AV + +A G+ P + NRR +
Sbjct: 82 YNQALSERRANAVLAA-LRARGAAQSANAKGDGESQPVAPNTVNGQDNPGGRQLNRRVEI 140
Query: 152 FLK 154
FL+
Sbjct: 141 FLR 143
>gi|262173862|ref|ZP_06041539.1| protein F-related protein [Vibrio mimicus MB-451]
gi|261891220|gb|EEY37207.1| protein F-related protein [Vibrio mimicus MB-451]
Length = 207
Score = 71.4 bits (173), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIA 100
+ + +++ FDT S + Q L + +L D ++EGH D G++ +
Sbjct: 90 DYPMIKLKNTIKFDTGSAKVSVQSKQWLDRMAQFLASESGIDIVLEGHTDNTGAQKFNDT 149
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
L +RA +V V R ++ + + YG+ +P+ ++ A NRR V
Sbjct: 150 LSEKRASSVKTALVQRQVAQNAIYTRGYGEHVPACTNKTKNGRACNRRVEV 200
>gi|260911422|ref|ZP_05918013.1| lipoprotein PG3 [Prevotella sp. oral taxon 472 str. F0295]
gi|260634469|gb|EEX52568.1| lipoprotein PG3 [Prevotella sp. oral taxon 472 str. F0295]
Length = 225
Score = 71.4 bits (173), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 51/138 (36%), Gaps = 2/138 (1%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDC 81
+ S+ + +++ + + + F T+ + + L+ E DC
Sbjct: 77 TAEQVKSAKVEEVTDANGLKAVKVTFDSGILFATNKAVLSQSSKNELAKFSQVLKENRDC 136
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDE 140
I GH D G+ +I L RA +V NY G+ + + V G P
Sbjct: 137 HVDIYGHTDNTGNDGINIPLSNSRAQSVVNYLSNCGVPRGQFQKVEGKGSSEPVASNASA 196
Query: 141 DAYAKNRRAIVFLKGCRA 158
+NRR V+L +A
Sbjct: 197 SGRQQNRRVEVYLYASKA 214
>gi|229528510|ref|ZP_04417901.1| protein F-related protein [Vibrio cholerae 12129(1)]
gi|229334872|gb|EEO00358.1| protein F-related protein [Vibrio cholerae 12129(1)]
Length = 204
Score = 71.4 bits (173), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 1/111 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIA 100
+ + ++V F+T S + A Q L + +L D ++EGH D GS +
Sbjct: 87 DYPMIKLNNTVRFETGSAKVSMASKQWLDTVARFLATESGIDIVLEGHTDNTGSEKLNDK 146
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
L RRA AV V + + + +G+ +P+ ++ A NRR +
Sbjct: 147 LAERRANAVKAALVQSRVVQNAIYTRGFGENVPACTNSTKNGRACNRRVEI 197
>gi|167576586|ref|ZP_02369460.1| unnamed protein product; Similar to putative exported protein
[Burkholderia thailandensis TXDOH]
Length = 541
Score = 71.4 bits (173), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 44/114 (38%), Gaps = 2/114 (1%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHADELGSRNSSI 99
E + + F T + P +Q + + LI GH+D GS ++
Sbjct: 413 ESTAMQLDTVTLFATGQATFSPGAVQRELQHALRMILANPEQRVLIVGHSDSAGSDAVNL 472
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA A+ ++FV +G+ +R V G P A NRR + L
Sbjct: 473 QLSKARARAIRDWFVDQGVLKTRFIVQGAGDTHPVADNASPLGRALNRRVEILL 526
>gi|153831565|ref|ZP_01984232.1| OmpA family protein [Vibrio harveyi HY01]
gi|148872075|gb|EDL70892.1| OmpA family protein [Vibrio harveyi HY01]
Length = 297
Score = 71.4 bits (173), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/163 (20%), Positives = 61/163 (37%), Gaps = 9/163 (5%)
Query: 1 MQYSTIFII-LSAITMMSISGIDNLDTKIS-------SPDTVLNESSLQEQFSSSVGDSV 52
M+ + + + +++ D ++ + L L + +
Sbjct: 1 MKTTLRLLGGVVGTLLVAGCATDTYVSQENRDKFTDLDVSKFLISECLAPEREIHIAVVE 60
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F Y+IR D L+ +E I GH D GS + AL LRRA +V ++
Sbjct: 61 HFAFDKYNIRDVDATSLNAFVHEIEGLSGRITIVGHTDYKGSLEYNEALSLRRAQSVESF 120
Query: 113 FVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ +V +G+ P G ++ A+NRRA V +
Sbjct: 121 LKEKLDPDHYDWEVKYFGETQPLALGKTDEDRAENRRAYVVFE 163
Score = 56.7 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 1/118 (0%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNS 97
+ + + FD ++P D+ L + L+ L+ GH D++GS +
Sbjct: 175 EPPKPDRKIYMAMTPHFDFDKSQLKPEDLAKLDSFTDKLQGLQGSILVAGHTDQIGSLSY 234
Query: 98 SIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ L RRA V Y + + + +V S+G+ P++ ++A A NRRA + K
Sbjct: 235 NEKLAQRRASEVVKYLKTKIDPSQFLWEVKSFGELQPAIDERSKEANALNRRAFIVFK 292
>gi|116329523|ref|YP_799243.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
L550]
gi|116329838|ref|YP_799556.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
JB197]
gi|116122267|gb|ABJ80310.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
L550]
gi|116123527|gb|ABJ74798.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
JB197]
Length = 684
Score = 71.4 bits (173), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
V+F+ + I + ++L L +L + I GH D + S+ + L +RA V
Sbjct: 580 RVYFEFNKTKITNENKKLLDPLVDYLLKNASDKIEIGGHTDNVASKEYNTRLSAKRARNV 639
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
+ YF+++GIS RMK+ +Y P E AKNRR
Sbjct: 640 YEYFLSKGISEKRMKIRAYWYSQPDADNETEIGRAKNRRV 679
>gi|315223627|ref|ZP_07865481.1| immunogenic peptidoglycan-associated lipoprotein PG4
[Capnocytophaga ochracea F0287]
gi|314946408|gb|EFS98403.1| immunogenic peptidoglycan-associated lipoprotein PG4
[Capnocytophaga ochracea F0287]
Length = 660
Score = 71.4 bits (173), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 6/110 (5%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYA 108
D+++FD +IRP + L+ + +E++ + H D GS + ++AL RRA +
Sbjct: 548 DNIYFDYDKANIRPDAAEQLAKIVKVMEEYPTMKIDVRLHTDSRGSDSYNLALSQRRAKS 607
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGH-----DEDAYAKNRRAIVFL 153
+ +A GI R+ YG+ E+ + NRR+ +
Sbjct: 608 TIKWLIAHGIHKDRITGKGYGETQLVNGCSNGVPCTEEQHQANRRSEFII 657
>gi|261252822|ref|ZP_05945395.1| outer membrane protein [Vibrio orientalis CIP 102891]
gi|260936213|gb|EEX92202.1| outer membrane protein [Vibrio orientalis CIP 102891]
Length = 222
Score = 71.4 bits (173), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
V E + Q + + + F +SSY++ P+ L + +E D +I+GH D
Sbjct: 96 SGVQVERVGENQLMLRLENGIGFQSSSYALDPSIHNTLRGVARILVEYPDTSLVIDGHTD 155
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS ++ L RRA +V +Y V++G++A R G+ P A NRR
Sbjct: 156 STGSDTTNQVLSERRAESVRSYLVSQGVAAGRAVARGNGERYPICTNDTTTGRACNRRVE 215
Query: 151 VFL 153
+ +
Sbjct: 216 IQI 218
>gi|126734944|ref|ZP_01750690.1| OmpA family domain protein [Roseobacter sp. CCS2]
gi|126715499|gb|EBA12364.1| OmpA family domain protein [Roseobacter sp. CCS2]
Length = 220
Score = 71.4 bits (173), Expect = 3e-11, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 46/113 (40%), Gaps = 1/113 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIA 100
+ + + F T+S + + L + + + D + GH D +G + +
Sbjct: 105 RDLRVVLSEDLLFATNSTQLSGTAQRELRIVANSLQQYPDSTVNVIGHTDNVGEASFNQG 164
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RRA AV + V G+S +R++ G+ P + NRR + +
Sbjct: 165 LSERRASAVSSVLVGGGVSRNRIRTIGAGENNPVASNLNAAGRQANRRVEIVI 217
>gi|24113943|ref|NP_708453.1| putative outer membrane lipoprotein [Shigella flexneri 2a str. 301]
gi|30064004|ref|NP_838175.1| putative outer membrane lipoprotein [Shigella flexneri 2a str.
2457T]
gi|74313195|ref|YP_311614.1| putative outer membrane lipoprotein [Shigella sonnei Ss046]
gi|82545149|ref|YP_409096.1| outer membrane lipoprotein [Shigella boydii Sb227]
gi|218706106|ref|YP_002413625.1| putative outer membrane lipoprotein [Escherichia coli UMN026]
gi|293406112|ref|ZP_06650038.1| outer membrane lipoprotein [Escherichia coli FVEC1412]
gi|293411994|ref|ZP_06654717.1| outer membrane lipoprotein [Escherichia coli B354]
gi|298381845|ref|ZP_06991442.1| outer membrane lipoprotein [Escherichia coli FVEC1302]
gi|300900209|ref|ZP_07118397.1| OmpA family protein [Escherichia coli MS 198-1]
gi|331684261|ref|ZP_08384853.1| YfiB [Escherichia coli H299]
gi|24053050|gb|AAN44160.1| putative outer membrane protein [Shigella flexneri 2a str. 301]
gi|30042260|gb|AAP17985.1| putative outer membrane protein [Shigella flexneri 2a str. 2457T]
gi|73856672|gb|AAZ89379.1| putative outer membrane protein [Shigella sonnei Ss046]
gi|81246560|gb|ABB67268.1| putative outer membrane protein [Shigella boydii Sb227]
gi|218433203|emb|CAR14101.1| putative outer membrane lipoprotein [Escherichia coli UMN026]
gi|291426118|gb|EFE99150.1| outer membrane lipoprotein [Escherichia coli FVEC1412]
gi|291468765|gb|EFF11256.1| outer membrane lipoprotein [Escherichia coli B354]
gi|298276985|gb|EFI18501.1| outer membrane lipoprotein [Escherichia coli FVEC1302]
gi|300356266|gb|EFJ72136.1| OmpA family protein [Escherichia coli MS 198-1]
gi|313648283|gb|EFS12727.1| ompA family protein [Shigella flexneri 2a str. 2457T]
gi|331077876|gb|EGI49082.1| YfiB [Escherichia coli H299]
gi|333000977|gb|EGK20547.1| ompA family protein [Shigella flexneri K-272]
Length = 160
Score = 71.4 bits (173), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 54/149 (36%), Gaps = 3/149 (2%)
Query: 8 IILSAITMMSISGIDNL-DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADI 66
+I +++ + + + + +S + D++ F + Y + P
Sbjct: 9 LIFTSLILTGCQSPQGKFTPEQVAAMQSYGFTESAGDWSLGLSDAILFAKNDYKLLPESQ 68
Query: 67 QVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMK 124
Q + + + L ++GH D G + + L L+RA V + + G +
Sbjct: 69 QQIQTMAAKLASTGLTHARMDGHTDNYGEDSYNEGLSLKRANVVADAWAIGGQIPRSNLT 128
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
GK+ P A+NRR V +
Sbjct: 129 TQGLGKKYPIASNKTAQGRAENRRVAVVI 157
>gi|238751686|ref|ZP_04613175.1| hypothetical protein yrohd0001_18130 [Yersinia rohdei ATCC 43380]
gi|238710096|gb|EEQ02325.1| hypothetical protein yrohd0001_18130 [Yersinia rohdei ATCC 43380]
Length = 575
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 2/103 (1%)
Query: 53 FFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FD +++ +VL N L K ++ GH D G S+ L L+RA +V N
Sbjct: 444 LFDVGQSTLKSGSTKVLINALVGIKAKPGWLIVVAGHTDITGESKSNQILSLKRAESVRN 503
Query: 112 YFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ G V YG+ P E A NRR + L
Sbjct: 504 WMRDTGDIPESCFAVQGYGQSRPLKPNDTETGRALNRRVEISL 546
>gi|323491818|ref|ZP_08096993.1| OmpA family protein [Vibrio brasiliensis LMG 20546]
gi|323313953|gb|EGA67042.1| OmpA family protein [Vibrio brasiliensis LMG 20546]
Length = 188
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALG 102
+ D++ F+T S + P L +G++L D +I+GHAD G+ + + +L
Sbjct: 73 VMVRLKDTIKFNTGSSRVAPDSKYWLDMMGNYLATQPSIDIVIDGHADSTGAPSFNDSLS 132
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
++RA AV V ++ + YG+ +P+ + A NRR V
Sbjct: 133 MKRAKAVKQQLVNNRVAMDSIYTRGYGEYVPACSNRTKAGKACNRRVEV 181
>gi|297538022|ref|YP_003673791.1| OmpA/MotB domain-containing protein [Methylotenera sp. 301]
gi|297257369|gb|ADI29214.1| OmpA/MotB domain protein [Methylotenera sp. 301]
Length = 616
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 59/145 (40%), Gaps = 3/145 (2%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS 70
+A+ + + V + ++ V V F+T+S I+ VL
Sbjct: 467 AALLADAKPLSSTISIAKPVVSAVEPAKVEVKPMANKVVPDVQFETNSAKIKEISYPVLD 526
Query: 71 NLGSWLEKH-DCDFLIEGHADELGSR--NSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
N + L++ D + + GH D+ + + + L +RA AV +Y V +GI A R+
Sbjct: 527 NAINTLKEWGDSNVEVGGHTDQRDTSKADYNQRLSEKRAKAVMDYIVKKGIDAKRLSAKG 586
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVF 152
YG P ++ NRR +
Sbjct: 587 YGYSKPIAENDPKEGNLVNRRVELV 611
>gi|254522020|ref|ZP_05134075.1| OmpA/MotB domain protein [Stenotrophomonas sp. SKA14]
gi|219719611|gb|EED38136.1| OmpA/MotB domain protein [Stenotrophomonas sp. SKA14]
Length = 513
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRA 106
V V F T I PA L+ + L+ IEGH D+ G+ + +L RA
Sbjct: 406 VAIQVNFATDKAQILPASELQLAQVLQLLQGDPALKLSIEGHTDDSGAVAHNRSLSEDRA 465
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+V A+GI+A R++ +G + P E+ A+NRR +
Sbjct: 466 RSVVAALTAKGIAADRLQAAGFGADKPVADNGSEEGKARNRRVELV 511
>gi|150025962|ref|YP_001296788.1| OmpA family outer membrane protein [Flavobacterium psychrophilum
JIP02/86]
gi|149772503|emb|CAL43986.1| Probable outer membrane protein, OmpA family [Flavobacterium
psychrophilum JIP02/86]
Length = 710
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 49/133 (36%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
+ I + + + ++ + +F + S + + S L E
Sbjct: 576 CPTVKGTIKNNGCPEVTADVMKKLNDYAKTILFEVSKSSFQQRTFPVLQSILAILKEYPV 635
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
F IEGH D G ++ L RA AV Y V GI ASR+ +G+ P +
Sbjct: 636 AKFSIEGHTDSDGKDTANQTLSETRAAAVMAYLVKNGIDASRLASKGFGESKPIATNKTK 695
Query: 141 DAYAKNRRAIVFL 153
NRR V L
Sbjct: 696 VGKILNRRVEVKL 708
>gi|323497435|ref|ZP_08102453.1| putative outer membrane protein [Vibrio sinaloensis DSM 21326]
gi|323317518|gb|EGA70511.1| putative outer membrane protein [Vibrio sinaloensis DSM 21326]
Length = 222
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
V E + Q + + + F T+S+++ L+ + +E D +I+G D
Sbjct: 96 SGVQVERVGENQLLLRLENGIGFATASHTLDSGIRNTLNGVARILVEYPDTSLVIDGFTD 155
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS ++ L RRA +V +Y V++G++A R G+ P + A NRR
Sbjct: 156 STGSDTTNQLLSERRAESVRSYLVSQGVAAGRAIARGNGERHPLCTNSTAEGRACNRRVE 215
Query: 151 VFL 153
+ +
Sbjct: 216 IQI 218
>gi|297620366|ref|YP_003708503.1| Sodium-type flagellar protein motY precursor [Waddlia chondrophila
WSU 86-1044]
gi|297375667|gb|ADI37497.1| Sodium-type flagellar protein motY precursor [Waddlia chondrophila
WSU 86-1044]
Length = 248
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
Query: 47 SVGDSVFFDTSS--YSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLR 104
+V +V+F +S + ++ + + D +EGH DE G+ ++ALG +
Sbjct: 135 TVFQTVYFPYNSGLIKGKGNMDRLRTIAAYMQKHPDTYLFVEGHCDERGAEAYNLALGAK 194
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
R+ +V + G+ R+ SYGKE P+ GH+E++++KNRRA +
Sbjct: 195 RSNSVRELLIKEGVRPERIFTVSYGKERPADSGHNEESWSKNRRAEFKI 243
>gi|281602014|gb|ADA74998.1| putative outer membrane protein [Shigella flexneri 2002017]
Length = 160
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 54/149 (36%), Gaps = 3/149 (2%)
Query: 8 IILSAITMMSISGIDNL-DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADI 66
+I +++ + + + + +S + D++ F + Y + P
Sbjct: 9 LIFTSLILTGCQSPQGKFTPEQVAAMQSYGFTESAGDWSLGLSDAILFAKNDYKLLPESQ 68
Query: 67 QVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMK 124
Q + + + L ++GH D G + + L L+RA V + + G +
Sbjct: 69 QQIQTMAAKLASTGLTHARMDGHTDNYGEDSYNEGLSLKRANVVADAWAIGGQIPRSNLT 128
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
GK+ P A+NRR V +
Sbjct: 129 TQGLGKKYPIASNKTAQGRAENRRVAVVI 157
>gi|229894342|ref|ZP_04509525.1| Outer membrane protein [Yersinia pestis Pestoides A]
gi|229703740|gb|EEO90756.1| Outer membrane protein [Yersinia pestis Pestoides A]
Length = 327
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 2/103 (1%)
Query: 53 FFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FD +++ ++L L K ++ GH D G ++ L L+RA A+ +
Sbjct: 196 LFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTDITGDAQANHILSLKRAEALRD 255
Query: 112 Y-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +S + V YG P D A NRR + L
Sbjct: 256 WMLSTSDVSPTCFAVQGYGATRPIADNDTPDGRALNRRVEISL 298
>gi|51597552|ref|YP_071743.1| PAL/OmpA family membrane protein [Yersinia pseudotuberculosis IP
32953]
gi|186896682|ref|YP_001873794.1| OmpA/MotB domain-containing protein [Yersinia pseudotuberculosis
PB1/+]
gi|51590834|emb|CAH22486.1| Putative PAL/OmpA-family membrane protein [Yersinia
pseudotuberculosis IP 32953]
gi|186699708|gb|ACC90337.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis PB1/+]
Length = 578
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 2/103 (1%)
Query: 53 FFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FD +++ ++L L K ++ GH D G ++ L L+RA A+ +
Sbjct: 447 LFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTDITGDAQANHILSLKRAEALRD 506
Query: 112 Y-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +S + V YG P D A NRR + L
Sbjct: 507 WMLSTSDVSPTCFAVQGYGATRPIADNDTPDGRALNRRVEISL 549
>gi|322379707|ref|ZP_08054020.1| peptidoglycan-associated lipoprotein precursor [Helicobacter suis
HS5]
gi|321147856|gb|EFX42443.1| peptidoglycan-associated lipoprotein precursor [Helicobacter suis
HS5]
Length = 181
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 57/132 (43%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ + E + S +V V+F Y IR V+ +++
Sbjct: 47 KTVPKEQVHEQPAPQEKPKPQIESGTVVGQVYFSFDKYDIRADMESVIDQAAQKIKESQM 106
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
L+EG+ DE GS + AL +RA +V + +GI+ ++V S G+ PS ++
Sbjct: 107 KVLLEGNTDEFGSGEYNFALANKRALSVKQALIIKGIAQDTIRVVSLGETKPSCQEKNKT 166
Query: 142 AYAKNRRAIVFL 153
Y KNRR + +
Sbjct: 167 CYRKNRRVDIKV 178
>gi|298717317|ref|YP_003729959.1| OmpA-family outer membrane protein YfiB [Pantoea vagans C9-1]
gi|298361506|gb|ADI78287.1| Putative OmpA-family outer membrane protein precursor yfiB [Pantoea
vagans C9-1]
Length = 157
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 22/140 (15%), Positives = 43/140 (30%), Gaps = 2/140 (1%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
+ + + E + + D + F + + P+ + +
Sbjct: 15 VGCQSKARFSDAQIAAMKSAGFTQNMEGWGLGLSDKILFGVNESELTPSSKLTIQGMAKN 74
Query: 76 LEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMP 133
L I+GH D G + + L L+RA AV + + G P
Sbjct: 75 LASTGIKHVRIDGHTDNYGKPDYNQQLSLKRANAVAAQWAEGAAIPRENIVTRGLGMSSP 134
Query: 134 SVYGHDEDAYAKNRRAIVFL 153
+ A+NRR + +
Sbjct: 135 VASNNSAQGRAQNRRVAIVI 154
>gi|189502647|ref|YP_001958364.1| hypothetical protein Aasi_1325 [Candidatus Amoebophilus asiaticus
5a2]
gi|189498088|gb|ACE06635.1| hypothetical protein Aasi_1325 [Candidatus Amoebophilus asiaticus
5a2]
Length = 656
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 47/120 (39%), Gaps = 1/120 (0%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNS 97
E + + +V+F YS+ L + D +EGH D +GS
Sbjct: 535 QPIEINQTKILKNVYFKYDEYSLNKKSYIELDRLVAFLKTNPDITIELEGHTDHIGSDEY 594
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
+ L +RA A++ Y + GI+ R+ YGK P ++ NRR + R
Sbjct: 595 NQQLSTKRAKAIYEYLLQAGIANDRVNYKGYGKTRPIAPNDSQENQQLNRRVAFRITRLR 654
>gi|196039232|ref|ZP_03106538.1| chemotaxis protein MotB [Bacillus cereus NVH0597-99]
gi|218905736|ref|YP_002453570.1| chemotaxis protein MotB [Bacillus cereus AH820]
gi|225866485|ref|YP_002751863.1| chemotaxis protein MotB [Bacillus cereus 03BB102]
gi|196029859|gb|EDX68460.1| chemotaxis protein MotB [Bacillus cereus NVH0597-99]
gi|218538809|gb|ACK91207.1| chemotaxis protein MotB [Bacillus cereus AH820]
gi|225788965|gb|ACO29182.1| chemotaxis protein MotB [Bacillus cereus 03BB102]
Length = 262
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 45/130 (34%), Gaps = 6/130 (4%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGH 88
+ ++ ++ ++V FD+ ++ + + + S + + + GH
Sbjct: 125 QLSSSFQTKLTEKGLMVTILENVLFDSGKADVKLESLGIAKEMSSLLVSASPREITVSGH 184
Query: 89 ADELGSRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
D + N+ A R + + + + YG+ ++
Sbjct: 185 TDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAIGYGEYRSIAPNDTQEGK 244
Query: 144 AKNRRAIVFL 153
AKNRR VF+
Sbjct: 245 AKNRRVEVFI 254
>gi|294651148|ref|ZP_06728483.1| OmpA/MotB domain protein [Acinetobacter haemolyticus ATCC 19194]
gi|292822980|gb|EFF81848.1| OmpA/MotB domain protein [Acinetobacter haemolyticus ATCC 19194]
Length = 255
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 2/117 (1%)
Query: 39 SLQEQFSSSVGDSVF-FDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRN 96
+ Q+ ++ D + F++ S + ++L + + I GH D G +
Sbjct: 138 AEQKVIDDALKDRIIEFESGSAILTETGKRILDEMAVALNKVGGKQVKIIGHTDSSGDAS 197
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L RA AV +Y V++ I+ R+ G P D KNRR +
Sbjct: 198 RNVILSKERAVAVQDYLVSKNIATDRLSTEGKGSSEPIADNATADGRRKNRRIEFEV 254
>gi|221209446|ref|ZP_03582427.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1]
gi|221170134|gb|EEE02600.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1]
Length = 159
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 55/151 (36%), Gaps = 5/151 (3%)
Query: 9 ILSAITMMSISGID----NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPA 64
L + + + L + ++ F + FD Y+++P
Sbjct: 7 TLLGVLLSAGCHTAPPHRGLTETQVTTLKSAGFKETEQGFEFGAAGPILFDFDRYNLKPD 66
Query: 65 DIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
+++ +G L D + G+ D+ G+ + L RRA V V G+ A R+
Sbjct: 67 VRRIVERIGRTLHSAGIDGVRVYGYTDDEGADGYDLELSRRRAEVVAIELVDVGLDARRI 126
Query: 124 KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ GK P A+NRRA + +
Sbjct: 127 AIVGRGKHDPVGDNRMPVGRAQNRRAAIVVS 157
>gi|170697118|ref|ZP_02888213.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
gi|170137954|gb|EDT06187.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
Length = 171
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 1/118 (0%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRN 96
+ F + FD Y+++P +++ +G L+ + + G++D+ G
Sbjct: 52 QETGQGFEFGSSGPILFDFDRYNLKPDVRRIVERIGRTLKSAGINGVRVYGYSDDEGEVA 111
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ L RRA V V G+ R+ V GK P A+NRRA + +
Sbjct: 112 YDLELSRRRAEVVAIELVDVGLDGKRIAVVGKGKSDPVGDNRTPTGRAQNRRAAIVVS 169
>gi|86130725|ref|ZP_01049325.1| OmpA family protein [Dokdonia donghaensis MED134]
gi|85819400|gb|EAQ40559.1| OmpA family protein [Dokdonia donghaensis MED134]
Length = 649
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 50/127 (39%), Gaps = 6/127 (4%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADE 91
V + + ++FD Y IRP L+ + ++E + + H D
Sbjct: 519 AVQIAKPGDDIAKILNLNPIYFDFDKYYIRPDAEIELAKVLVYMETYPSVRIDVRSHTDS 578
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD-----EDAYAKN 146
G+ + L R + ++ +A+GI+ SR+ YG+ + E+ + N
Sbjct: 579 RGNDEYNRTLSQNRNVSTRDWLIAKGINPSRLSGRGYGESQLVNECSNGVQCSEEQHQLN 638
Query: 147 RRAIVFL 153
RR+ +
Sbjct: 639 RRSEFIV 645
>gi|322379220|ref|ZP_08053611.1| Peptidoglycan-associated lipoprotein [Helicobacter suis HS1]
gi|321148360|gb|EFX42869.1| Peptidoglycan-associated lipoprotein [Helicobacter suis HS1]
Length = 181
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 57/132 (43%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ + E + S +V V+F Y IR ++ +++
Sbjct: 47 KTVPKEQVHEQPAPQEKPKPQIESGTVVGQVYFSFDKYDIRADMESIIDQAAQKIKESQM 106
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
L+EG+ DE GS + AL +RA +V + +GI+ ++V S G+ PS ++
Sbjct: 107 KVLLEGNTDEFGSGEYNFALANKRALSVKQALIIKGIAQDTIRVVSLGETKPSCQEKNKT 166
Query: 142 AYAKNRRAIVFL 153
Y KNRR + +
Sbjct: 167 CYRKNRRVDIKV 178
>gi|254784323|ref|YP_003071751.1| HAD-superfamily hydrolase subfamily IA, variant 3 [Teredinibacter
turnerae T7901]
gi|237683781|gb|ACR11045.1| HAD-superfamily hydrolase subfamily IA, variant 3 [Teredinibacter
turnerae T7901]
Length = 373
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 2/111 (1%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLR 104
S+ V FD+ S ++P + + ++ + + I+GH D + + +L R
Sbjct: 254 ISINLKVNFDSGSAVVKPEFFSEIRKVADFMAQYENTRVEIQGHTDTSCAAAYNKSLSQR 313
Query: 105 RAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RA AV ++ G++ASR+ YG+E P NRR + +
Sbjct: 314 RASAVAAVLISEYGVAASRVDARGYGEEQPIADESTAAGRLANRRVVAQVS 364
>gi|312884943|ref|ZP_07744633.1| flagellar motor protein MotB [Vibrio caribbenthicus ATCC BAA-2122]
gi|309367420|gb|EFP94982.1| flagellar motor protein MotB [Vibrio caribbenthicus ATCC BAA-2122]
Length = 328
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 5/128 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ +L +Q + + F S ++P ++ + ++ + GH D
Sbjct: 185 QGAMEVENLGQQIDIRIRERGAFPEGSAFLQPKFRPLVRQIAELVKDIPGVVRVSGHTDN 244
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S+ L +RA +V RG R++V P E A N
Sbjct: 245 QPIDSELYRSNWDLSAQRAVSVAQEMEKVRGFKHDRLRVRGMADTEPLGPNKTEAQRALN 304
Query: 147 RRAIVFLK 154
RR + +
Sbjct: 305 RRVEISIM 312
>gi|260773875|ref|ZP_05882790.1| protein F-related protein [Vibrio metschnikovii CIP 69.14]
gi|260610836|gb|EEX36040.1| protein F-related protein [Vibrio metschnikovii CIP 69.14]
Length = 208
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 55/132 (41%), Gaps = 1/132 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKH 79
D+ S + + E + + +V F T S + A +Q L+ LG +
Sbjct: 70 SDSSLESFLSANGLDYELIPGDHTMVKLKRAVQFQTGSAVVPSASVQWLAQLGRYLANTP 129
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
D +IEGH D G+ + L +RRA V N + + +S + + YG+ P+
Sbjct: 130 QIDIVIEGHTDNTGTERFNDGLSMRRADTVKNILLEQQVSLAAIYTRGYGEHTPACTNQT 189
Query: 140 EDAYAKNRRAIV 151
A NRR +
Sbjct: 190 SQGRACNRRVEL 201
>gi|229090688|ref|ZP_04221921.1| OmpA/MotB domain protein [Bacillus cereus Rock3-42]
gi|228692630|gb|EEL46356.1| OmpA/MotB domain protein [Bacillus cereus Rock3-42]
Length = 126
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 50/119 (42%), Gaps = 5/119 (4%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNS--- 97
S + D++ FDT +++P +++S L + + ++EGH D N
Sbjct: 7 DTGVSVVIVDNLIFDTGDANVKPEAKEIISQLVGFFQSVPNPIVVEGHTDSRPIHNDKFP 66
Query: 98 -SIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ L RA + ++ + + R+ Y P V + KNRR ++++K
Sbjct: 67 SNWELSSARAANMIHHLIEVYNVDDKRLAAVGYADTKPVVPNDSPQNWEKNRRVVIYIK 125
>gi|121585594|ref|ZP_01675390.1| protein F-related protein [Vibrio cholerae 2740-80]
gi|229506176|ref|ZP_04395685.1| protein F-related protein [Vibrio cholerae BX 330286]
gi|229509966|ref|ZP_04399446.1| protein F-related protein [Vibrio cholerae B33]
gi|229516473|ref|ZP_04405920.1| protein F-related protein [Vibrio cholerae RC9]
gi|229605715|ref|YP_002876419.1| protein F-related protein [Vibrio cholerae MJ-1236]
gi|255746568|ref|ZP_05420515.1| protein F-related protein [Vibrio cholera CIRS 101]
gi|262158841|ref|ZP_06029954.1| protein F-related protein [Vibrio cholerae INDRE 91/1]
gi|121550211|gb|EAX60225.1| protein F-related protein [Vibrio cholerae 2740-80]
gi|229346354|gb|EEO11325.1| protein F-related protein [Vibrio cholerae RC9]
gi|229352411|gb|EEO17351.1| protein F-related protein [Vibrio cholerae B33]
gi|229356527|gb|EEO21445.1| protein F-related protein [Vibrio cholerae BX 330286]
gi|229372201|gb|ACQ62623.1| protein F-related protein [Vibrio cholerae MJ-1236]
gi|255736322|gb|EET91720.1| protein F-related protein [Vibrio cholera CIRS 101]
gi|262029414|gb|EEY48065.1| protein F-related protein [Vibrio cholerae INDRE 91/1]
Length = 204
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIA 100
+ + ++V F+T S + A Q L + +L D ++EGH D GS +
Sbjct: 87 DYPMIKLNNTVRFETGSAKVSMASKQWLDTVARFLATESGIDIVLEGHTDNTGSEKLNDK 146
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
L RRA AV V ++ + + +G+ +P+ ++ A NRR +
Sbjct: 147 LAERRANAVKAALVQSRVAQNAIYTRGFGENVPACTNSTKNGRACNRRVEI 197
>gi|258626412|ref|ZP_05721259.1| putative lipoprotein [Vibrio mimicus VM603]
gi|258581464|gb|EEW06366.1| putative lipoprotein [Vibrio mimicus VM603]
Length = 223
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 52/114 (45%), Gaps = 1/114 (0%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSI 99
+ Q + + + F +SSY + + L + + D +IEGH D GS ++
Sbjct: 106 ENQLMLRMENGIGFTSSSYQLDSYIHKTLRGVARILVAYPDTSLVIEGHTDSTGSDTTNQ 165
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L +RA +V + +++G++A R G+ P + + A NRR + +
Sbjct: 166 VLSEKRAESVRAFLLSQGVAAGRAIARGNGERFPLCSNNTAEGRACNRRVEIQI 219
>gi|229158119|ref|ZP_04286188.1| OmpA/MotB domain protein [Bacillus cereus ATCC 4342]
gi|228625348|gb|EEK82106.1| OmpA/MotB domain protein [Bacillus cereus ATCC 4342]
Length = 234
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 18/128 (14%), Positives = 45/128 (35%), Gaps = 6/128 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+ ++ ++ ++V FD+ ++ + + + + + + + GH D
Sbjct: 99 SSSFQTKLTEKGLMVTILENVLFDSGKADVKLESLSIAKEMSNLLVSASPREITVSGHTD 158
Query: 91 ELGSRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ N+ A R + + + + YG+ ++ AK
Sbjct: 159 NVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPGKFSAVGYGEYRAIAPNDTQEGKAK 218
Query: 146 NRRAIVFL 153
NRR VF+
Sbjct: 219 NRRVEVFI 226
>gi|167623118|ref|YP_001673412.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis
HAW-EB4]
gi|167353140|gb|ABZ75753.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4]
Length = 199
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 1/104 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+V F+ + + + Q L + WL+ D L+ GH D +GS ++ L RA V
Sbjct: 93 AVKFEFARADVLLSQAQTLEVIARWLKSTGGDLLLVGHTDSVGSPAYNLQLSFERAEQVK 152
Query: 111 NYFVARGIS-ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
N V + ASR +V G P +NRR +
Sbjct: 153 NVLVEQFGLLASRFQVVGVGSAEPIADNRTRQGREQNRRVEFLV 196
>gi|217959212|ref|YP_002337760.1| flagellar motor protein MotS [Bacillus cereus AH187]
gi|217063689|gb|ACJ77939.1| putative chemotaxis protein MotB [Bacillus cereus AH187]
Length = 225
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 53/127 (41%), Gaps = 5/127 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ +N S + D++ FDT +++P +++S L + + ++EGH D
Sbjct: 98 SQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKEIISKLVGFFQSVPNSIVVEGHTDSR 157
Query: 93 GSRNS----SIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
N + L RA + ++ + + R+ Y P V + KNR
Sbjct: 158 PIHNEKFPSNWELSSARAANMIHHLIEVYNVDDKRLAAVGYADTKPVVPNDSPQNWEKNR 217
Query: 148 RAIVFLK 154
R ++++K
Sbjct: 218 RVVIYIK 224
>gi|297580458|ref|ZP_06942385.1| OmpA family protein [Vibrio cholerae RC385]
gi|297536104|gb|EFH74938.1| OmpA family protein [Vibrio cholerae RC385]
Length = 207
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 1/126 (0%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLI 85
+ S + + +E + + ++V F+T S + A Q L + +L D ++
Sbjct: 75 QYLSSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSMASKQWLDTVARFLATESGIDIVL 134
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
EGH D GS + L RRA AV V ++ + + +G+ +P+ ++ A
Sbjct: 135 EGHTDNTGSEKLNDKLAERRANAVKAALVQSRVAQNAIYTRGFGENVPACTNSTKNGRAC 194
Query: 146 NRRAIV 151
NRR +
Sbjct: 195 NRRVEI 200
>gi|262190496|ref|ZP_06048743.1| protein F-related protein [Vibrio cholerae CT 5369-93]
gi|262033626|gb|EEY52117.1| protein F-related protein [Vibrio cholerae CT 5369-93]
Length = 204
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 1/123 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGH 88
S + + +E + + ++V F+T S + A Q L + +L D ++EGH
Sbjct: 75 SSNGIQHEVVPGDYPMIKLNNTVRFETGSAKVSMASKQWLDTVARFLATESGIDIVLEGH 134
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D GS + L RRA AV V ++ + + +G+ +P+ ++ A NRR
Sbjct: 135 TDNTGSEKLNDKLAERRANAVKAALVQSRVAQNAIYTRGFGENVPACTNSTKNGRACNRR 194
Query: 149 AIV 151
+
Sbjct: 195 VEI 197
>gi|258622653|ref|ZP_05717674.1| putative lipoprotein [Vibrio mimicus VM573]
gi|262171774|ref|ZP_06039452.1| outer membrane protein [Vibrio mimicus MB-451]
gi|258585109|gb|EEW09837.1| putative lipoprotein [Vibrio mimicus VM573]
gi|261892850|gb|EEY38836.1| outer membrane protein [Vibrio mimicus MB-451]
Length = 223
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSI 99
+ Q + + + F +SSY + + L + + D +IEGH D GS ++
Sbjct: 106 ENQLMLRMENGIGFTSSSYQLDSYIHKTLRGVARILVAYPDTSLVIEGHTDSTGSDTTNQ 165
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L +RA +V + +++G++A R G+ P + A NRR + +
Sbjct: 166 VLSEKRAESVRAFLLSQGVAAGRAIARGNGERFPLCSNSTAEGRACNRRVEIQI 219
>gi|229526017|ref|ZP_04415421.1| protein F-related protein [Vibrio cholerae bv. albensis VL426]
gi|229336175|gb|EEO01193.1| protein F-related protein [Vibrio cholerae bv. albensis VL426]
Length = 204
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIA 100
+ + ++V F+T S + A Q L + +L D ++EGH D GS +
Sbjct: 87 DYPMIKLNNTVRFETGSAKVSMASKQWLDTVARFLATESGIDIVLEGHTDNTGSEKLNDK 146
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
L RRA AV V ++ + + +G+ +P+ ++ A NRR +
Sbjct: 147 LAERRANAVKAALVQSRVAQNAIYTRGFGENVPACTNSTKNGRACNRRVEI 197
>gi|228987761|ref|ZP_04147872.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228772035|gb|EEM20490.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 234
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 18/128 (14%), Positives = 45/128 (35%), Gaps = 6/128 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+ ++ ++ ++V FD+ ++ + + + + + + + GH D
Sbjct: 99 SSSFQTKLTEKGLMVTILENVLFDSGKADVKLESLSIAKEMSNLLVSASPREITVSGHTD 158
Query: 91 ELGSRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ N+ A R + + + + YG+ ++ AK
Sbjct: 159 NVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPGKFSAVGYGEYRAIAPNDTQEGKAK 218
Query: 146 NRRAIVFL 153
NRR VF+
Sbjct: 219 NRRVEVFI 226
>gi|229917739|ref|YP_002886385.1| OmpA/MotB domain protein [Exiguobacterium sp. AT1b]
gi|229469168|gb|ACQ70940.1| OmpA/MotB domain protein [Exiguobacterium sp. AT1b]
Length = 259
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 51/134 (38%), Gaps = 6/134 (4%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLI 85
K + ++ + + ++ D F+ ++ V N+ + + ++
Sbjct: 106 KKNGLESQIKATINSSGLVLTIQDRALFNLGEATLDADARAVAQNISQILEKAGKREIVV 165
Query: 86 EGHADELGS----RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDE 140
GH D + S+ L RA A +A + ++ + SYG+ P E
Sbjct: 166 SGHTDNIPINTARFPSNWELSSARATAFMRGLLANDALNPAQFTLASYGEFKPIATNDTE 225
Query: 141 DAYAKNRRAIVFLK 154
+ +KNRR V +K
Sbjct: 226 EGRSKNRRVEVLIK 239
>gi|170023051|ref|YP_001719556.1| OmpA/MotB domain-containing protein [Yersinia pseudotuberculosis
YPIII]
gi|169749585|gb|ACA67103.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis YPIII]
Length = 578
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 2/103 (1%)
Query: 53 FFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FD +++ ++L L K ++ GH D G ++ L L+RA A+ +
Sbjct: 447 LFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTDITGDAQANHILSLKRAEALRD 506
Query: 112 Y-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +S + V YG P D A NRR + L
Sbjct: 507 WMLSTSDVSPTCFAVQGYGATRPIADNDTPDGRALNRRVEISL 549
>gi|15601417|ref|NP_233048.1| protein F-related protein [Vibrio cholerae O1 biovar eltor str.
N16961]
gi|153211953|ref|ZP_01947800.1| OmpA family protein [Vibrio cholerae 1587]
gi|153800869|ref|ZP_01955455.1| OmpA family protein [Vibrio cholerae MZO-3]
gi|153818096|ref|ZP_01970763.1| OmpA family protein [Vibrio cholerae NCTC 8457]
gi|153824386|ref|ZP_01977053.1| OmpA family protein [Vibrio cholerae MZO-2]
gi|227812226|ref|YP_002812236.1| protein F-related protein [Vibrio cholerae M66-2]
gi|254285685|ref|ZP_04960648.1| OmpA family protein [Vibrio cholerae AM-19226]
gi|254849820|ref|ZP_05239170.1| OmpA family protein [Vibrio cholerae MO10]
gi|298499464|ref|ZP_07009270.1| OmpA family protein [Vibrio cholerae MAK 757]
gi|9658075|gb|AAF96560.1| protein F-related protein [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|124117029|gb|EAY35849.1| OmpA family protein [Vibrio cholerae 1587]
gi|124123579|gb|EAY42322.1| OmpA family protein [Vibrio cholerae MZO-3]
gi|126511364|gb|EAZ73958.1| OmpA family protein [Vibrio cholerae NCTC 8457]
gi|149741940|gb|EDM55969.1| OmpA family protein [Vibrio cholerae MZO-2]
gi|150424182|gb|EDN16120.1| OmpA family protein [Vibrio cholerae AM-19226]
gi|227011368|gb|ACP07579.1| protein F-related protein [Vibrio cholerae M66-2]
gi|254845525|gb|EET23939.1| OmpA family protein [Vibrio cholerae MO10]
gi|297541445|gb|EFH77496.1| OmpA family protein [Vibrio cholerae MAK 757]
Length = 207
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIA 100
+ + ++V F+T S + A Q L + +L D ++EGH D GS +
Sbjct: 90 DYPMIKLNNTVRFETGSAKVSMASKQWLDTVARFLATESGIDIVLEGHTDNTGSEKLNDK 149
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
L RRA AV V ++ + + +G+ +P+ ++ A NRR +
Sbjct: 150 LAERRANAVKAALVQSRVAQNAIYTRGFGENVPACTNSTKNGRACNRRVEI 200
>gi|298529615|ref|ZP_07017018.1| OmpA/MotB domain protein [Desulfonatronospira thiodismutans ASO3-1]
gi|298511051|gb|EFI34954.1| OmpA/MotB domain protein [Desulfonatronospira thiodismutans ASO3-1]
Length = 251
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 48/129 (37%), Gaps = 6/129 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHAD 90
+ ++ + + + ++ V FD +RP ++L ++ +H + IEGH D
Sbjct: 118 EGIVGARLDEGKITLTLPSEVLFDLGEVELRPEGEELLQDMRDIFNRHSEQRINIEGHTD 177
Query: 91 ELGS-----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ + + RA + GI RM T Y P E A+
Sbjct: 178 NIPPREGGRFEDNWEISSLRALNTLRFLKQEGIDPGRMTATGYADLQPLYPNTTEGNRAR 237
Query: 146 NRRAIVFLK 154
NRR L+
Sbjct: 238 NRRVEFVLE 246
>gi|153946939|ref|YP_001399719.1| OmpA domain-containing protein [Yersinia pseudotuberculosis IP
31758]
gi|152958434|gb|ABS45895.1| OmpA domain protein [Yersinia pseudotuberculosis IP 31758]
Length = 578
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 2/103 (1%)
Query: 53 FFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FD +++ ++L L K ++ GH D G ++ L L+RA A+ +
Sbjct: 447 LFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTDITGDAQANHILSLKRAEALRD 506
Query: 112 Y-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +S + V YG P D A NRR + L
Sbjct: 507 WMLSTSDVSPTCFAVQGYGATRPIADNDTPDGRALNRRVEISL 549
>gi|206974802|ref|ZP_03235717.1| putative chemotaxis protein MotB [Bacillus cereus H3081.97]
gi|222095352|ref|YP_002529412.1| flagellar motor protein mots [Bacillus cereus Q1]
gi|206746821|gb|EDZ58213.1| putative chemotaxis protein MotB [Bacillus cereus H3081.97]
gi|221239410|gb|ACM12120.1| chemotaxis protein MotB, putative [Bacillus cereus Q1]
Length = 225
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 53/127 (41%), Gaps = 5/127 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ +N S + D++ FDT +++P +++S L + + ++EGH D
Sbjct: 98 SQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKEIISKLVGFFQSVPNSIVVEGHTDSR 157
Query: 93 GSRNS----SIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
N + L RA + ++ + + R+ Y P V + KNR
Sbjct: 158 PIHNEKFPSNWELSSARAANMIHHLIEVYNVEDKRLAAVGYADTKPVVPNDSPQNWEKNR 217
Query: 148 RAIVFLK 154
R ++++K
Sbjct: 218 RVVIYIK 224
>gi|126668169|ref|ZP_01739130.1| Flagellar motor protein [Marinobacter sp. ELB17]
gi|126627318|gb|EAZ97954.1| Flagellar motor protein [Marinobacter sp. ELB17]
Length = 279
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 57/146 (39%), Gaps = 5/146 (3%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
+++++ + + LN + Q + F + +I+ + ++ +
Sbjct: 116 VITLASSLIRELENEVASGALNVDYDEHQVIIRFSEDATFMSGDATIKKEMLPIIERVVD 175
Query: 75 WLEKHDCDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFV-ARGISASRMKVTSYG 129
L+ D ++ G+ D+ S+ L RA +V + V R + A R+
Sbjct: 176 VLKNCRGDVVVAGYTDDRPIASSRYRSNWDLSAARAVSVVHELVLNRDVPADRVIAAGRA 235
Query: 130 KEMPSVYGHDEDAYAKNRRAIVFLKG 155
+ P V + + A NRR + ++G
Sbjct: 236 ETNPLVPNNSPENRAVNRRVEIAIRG 261
>gi|95929277|ref|ZP_01312021.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684]
gi|95134775|gb|EAT16430.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684]
Length = 217
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLR 104
+ FD S+++R Q ++ L + E H L+ GH D GS ++ L R
Sbjct: 106 VTFRSDNQFDVGSFTLRAGAQQDVARLAAILTEYHKTTILVAGHTDSTGSEEYNLGLSER 165
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA AV N VA G+ ++R+ +G+ P E NRR + +
Sbjct: 166 RAMAVRNILVASGVISTRITTVGFGESAPIADNSTEYGRQLNRRVALKI 214
>gi|45441186|ref|NP_992725.1| hypothetical protein YP_1360 [Yersinia pestis biovar Microtus str.
91001]
gi|51595824|ref|YP_070015.1| OmpA family outer membrane protein [Yersinia pseudotuberculosis IP
32953]
gi|108806760|ref|YP_650676.1| hypothetical protein YPA_0763 [Yersinia pestis Antiqua]
gi|145598791|ref|YP_001162867.1| hypothetical protein YPDSF_1507 [Yersinia pestis Pestoides F]
gi|149366559|ref|ZP_01888593.1| putative exported protein [Yersinia pestis CA88-4125]
gi|167467063|ref|ZP_02331767.1| hypothetical protein YpesF_04015 [Yersinia pestis FV-1]
gi|218928612|ref|YP_002346487.1| hypothetical protein YPO1469 [Yersinia pestis CO92]
gi|229841445|ref|ZP_04461604.1| putative exported protein [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229843557|ref|ZP_04463700.1| putative exported protein [Yersinia pestis biovar Orientalis str.
India 195]
gi|294503448|ref|YP_003567510.1| hypothetical protein YPZ3_1338 [Yersinia pestis Z176003]
gi|45436046|gb|AAS61602.1| putative exported protein [Yersinia pestis biovar Microtus str.
91001]
gi|51589106|emb|CAH20726.1| OmpA family of outer membrane porins [Yersinia pseudotuberculosis
IP 32953]
gi|108778673|gb|ABG12731.1| hypothetical protein YPA_0763 [Yersinia pestis Antiqua]
gi|115347223|emb|CAL20117.1| putative exported protein [Yersinia pestis CO92]
gi|145210487|gb|ABP39894.1| hypothetical protein YPDSF_1507 [Yersinia pestis Pestoides F]
gi|149290933|gb|EDM41008.1| putative exported protein [Yersinia pestis CA88-4125]
gi|229689165|gb|EEO81228.1| putative exported protein [Yersinia pestis biovar Orientalis str.
India 195]
gi|229697811|gb|EEO87858.1| putative exported protein [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|262364848|gb|ACY61405.1| hypothetical protein YPD8_0715 [Yersinia pestis D182038]
gi|294353907|gb|ADE64248.1| hypothetical protein YPZ3_1338 [Yersinia pestis Z176003]
Length = 578
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 2/103 (1%)
Query: 53 FFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FD +++ ++L L K ++ GH D G ++ L L+RA A+ +
Sbjct: 447 LFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTDITGDAQANHILSLKRAEALRD 506
Query: 112 Y-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +S + V YG P D A NRR + L
Sbjct: 507 WMLSTSDVSPTCFAVQGYGATRPIADNDTPDGRALNRRVEISL 549
>gi|254253774|ref|ZP_04947091.1| OmpA/MotB [Burkholderia dolosa AUO158]
gi|124898419|gb|EAY70262.1| OmpA/MotB [Burkholderia dolosa AUO158]
Length = 232
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLR 104
S+ +F T S ++ PA L L + ++H + G+ D +GS ++AL R
Sbjct: 122 VSLTGDAYFATDSATLTPAARAALDKLLNRQGDRHFSRIEVTGYTDAVGSDAYNVALSRR 181
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RA AV Y RG++A T GK P + A NRR + L+
Sbjct: 182 RADAVAAYLRERGLNADSFVATGKGKADPGASNATAEGRASNRRVEISLQ 231
>gi|114045658|ref|YP_736208.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-7]
gi|113887100|gb|ABI41151.1| OmpA/MotB domain protein [Shewanella sp. MR-7]
Length = 487
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 53/125 (42%), Gaps = 5/125 (4%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRN 96
+ E + + F+ S + P V+ L S+L+ + F + GH D+ G++
Sbjct: 365 TDQIEAKGHVALEGLLFEYDSDKLLPEAQPVVEVLASYLKANPKRAFYVVGHTDDKGNQA 424
Query: 97 SSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+ L RRA A+ + I +++ G+ P DE +NRR + L
Sbjct: 425 YNQGLSQRRAVAIVKLLTSSHGIQTQQLEAVGIGEHAPVASNSDEAGQQQNRRVELVL-- 482
Query: 156 CRANT 160
R++T
Sbjct: 483 -RSDT 486
>gi|209809374|ref|YP_002264912.1| outer membrane protein, OmpA family [Aliivibrio salmonicida
LFI1238]
gi|208010936|emb|CAQ81341.1| outer membrane protein, OmpA family [Aliivibrio salmonicida
LFI1238]
Length = 212
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 51/115 (44%), Gaps = 1/115 (0%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSS 98
+Q ++ + V F ++ ++ P +L+ L S + +++GH D G+ ++
Sbjct: 93 SDDQLVITIQEKVHFASAQATLTPLATSLLNQLISIMATKPELALVLDGHTDISGNAINN 152
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L +R+ V Y + ++AS++ +G+ +P NRR + +
Sbjct: 153 QNLSEKRSNEVRRYLLDNNLNASQLYSRGFGEYLPLCDNETTLGRKCNRRVEITV 207
>gi|319900153|ref|YP_004159881.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108]
gi|319415184|gb|ADV42295.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108]
Length = 419
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 58/137 (42%), Gaps = 3/137 (2%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-W 75
S SG + +I+ L + + + + G + FD I+P + ++ +
Sbjct: 283 SASGAALTNFRIAQGAVPLYDRMMSDGKFITYG--ITFDVGKSVIKPESMGEINRIVQLM 340
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
E F +EGH D G+ S+ L R+ ++ + V GI+A R+ + G+ P
Sbjct: 341 TENPTLKFSVEGHTDSTGNATSNQTLSEARSKSIVDKLVEMGIAADRLTSSGKGQTTPIA 400
Query: 136 YGHDEDAYAKNRRAIVF 152
++ AKNRR
Sbjct: 401 DNATDEGRAKNRRVEFV 417
>gi|215487943|ref|YP_002330374.1| putative outer membrane lipoprotein [Escherichia coli O127:H6 str.
E2348/69]
gi|215266015|emb|CAS10427.1| predicted outer membrane lipoprotein [Escherichia coli O127:H6 str.
E2348/69]
Length = 160
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 54/149 (36%), Gaps = 3/149 (2%)
Query: 8 IILSAITMMSISGIDNL-DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADI 66
+I +++ + + + + +S + D++ F + Y + P
Sbjct: 9 LIFTSLILTGCQSPQGKFTPEQVAAMQSYGFTESAGDWSLGLSDAILFAKNDYKLLPESQ 68
Query: 67 QVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMK 124
Q + + + L ++GH D G + + L L+RA V + + G +
Sbjct: 69 QQIQTMAAKLASIGLTHARMDGHTDNYGEDSYNEVLSLKRANVVADAWAIGGQIPRSNLT 128
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
GK+ P A+NRR V +
Sbjct: 129 TQGLGKKYPIASNKTAQGRAENRRVAVVI 157
>gi|186894908|ref|YP_001872020.1| OmpA/MotB domain-containing protein [Yersinia pseudotuberculosis
PB1/+]
gi|186697934|gb|ACC88563.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis PB1/+]
Length = 581
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 2/103 (1%)
Query: 53 FFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FD +++ ++L L K ++ GH D G ++ L L+RA A+ +
Sbjct: 450 LFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTDITGDAQANHILSLKRAEALRD 509
Query: 112 Y-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +S + V YG P D A NRR + L
Sbjct: 510 WMLSTSDVSPTCFAVQGYGATRPIADNDTPDGRALNRRVEISL 552
>gi|89076013|ref|ZP_01162376.1| hypothetical outer membrane protein OmpA [Photobacterium sp. SKA34]
gi|89048248|gb|EAR53829.1| hypothetical outer membrane protein OmpA [Photobacterium sp. SKA34]
Length = 355
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 2/114 (1%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALG 102
V S+ F SY I AD + L+ + L+ + ++ GH D G+ + L
Sbjct: 227 QVEPVTVSIPFAFDSYKITHADKERLAPIAKRLQDNPETELVVVGHTDSKGAEAYNQKLS 286
Query: 103 LRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
RA V + + + +SR++ G+ P E NRR V G
Sbjct: 287 EERAQKVATFLMNEYNLDSSRVRAEGRGELNPVASNKTEAGRTDNRRVDVTASG 340
>gi|57169060|ref|ZP_00368187.1| fibronectin-binding protein [Campylobacter coli RM2228]
gi|57019518|gb|EAL56209.1| fibronectin-binding protein [Campylobacter coli RM2228]
Length = 332
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FD +I PA + + + E D ++EGH D +GSR+ + L RRA +V
Sbjct: 228 HFDFDKVNINPAFEEQIKEIAQILDENVRYDTILEGHTDNIGSRSYNQKLSERRANSVAK 287
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI--VFLK 154
G+ SR++ YG++ P ++ A NRR L+
Sbjct: 288 ELEKFGVDKSRIQTVGYGQDKPRSSNETKEGRADNRRVDAKFILR 332
>gi|300771553|ref|ZP_07081428.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33861]
gi|300761542|gb|EFK58363.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33861]
Length = 650
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 53/122 (43%), Gaps = 6/122 (4%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRN 96
+ E+ +S V +++++D Y+IR +L+ L + + + H D +
Sbjct: 526 QPVIEKGTSFVLENIYYDLDKYNIREDAKPILNQLVRTMRDNPSLKIELSSHTDSRATAR 585
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD-----EDAYAKNRRAIV 151
++ L RA A +Y V+RGI+ R+ YG+ D E + NRR +
Sbjct: 586 YNMKLSQNRAQAAVDYIVSRGIARDRIVAKGYGESKLVNKCADGVQCSEAEHQANRRTEI 645
Query: 152 FL 153
+
Sbjct: 646 KV 647
>gi|206977733|ref|ZP_03238624.1| chemotaxis protein MotB [Bacillus cereus H3081.97]
gi|217961995|ref|YP_002340565.1| flagellar motor protein MotB [Bacillus cereus AH187]
gi|222097978|ref|YP_002532035.1| flagellar motor protein motb [Bacillus cereus Q1]
gi|206744034|gb|EDZ55450.1| chemotaxis protein MotB [Bacillus cereus H3081.97]
gi|217067135|gb|ACJ81385.1| chemotaxis protein MotB [Bacillus cereus AH187]
gi|221242036|gb|ACM14746.1| chemotaxis motB protein (Motility protein B) [Bacillus cereus Q1]
gi|324328404|gb|ADY23664.1| flagellar motor protein MotB [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 261
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 18/120 (15%), Positives = 44/120 (36%), Gaps = 6/120 (5%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSS 98
++ ++ ++V FD+ ++ + + + + + + + GH D + N+
Sbjct: 134 TEKGLKVTILENVLFDSGKADVKLESLSIAKEMSNLLVSASPREITVSGHTDNVPIANAQ 193
Query: 99 IALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
A R + + + + YG+ ++ AKNRR VF+
Sbjct: 194 FASNWELSTQRAVNFMQVLLQNKELQPGKFSAVGYGEYRSIAPNDTQEGKAKNRRVEVFI 253
>gi|294085867|ref|YP_003552627.1| peptidoglycan-associated lipoprotein [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292665442|gb|ADE40543.1| Peptidoglycan-associated lipoprotein [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 186
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 43/115 (37%), Positives = 67/115 (58%), Gaps = 1/115 (0%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNSS 98
+ + VG++V+FD S + LS + +IEGH DE G+R +
Sbjct: 71 TTAEKLARVGNTVYFDFDSAVLSYDAQVTLSRQSAFLQLNPEAVVVIEGHCDERGTREYN 130
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ALG RRA A ++ +A+GI A+R++ SYGKE P++ G +E+++AKNRRA L
Sbjct: 131 LALGDRRASAARDFLLAKGIDAARIRTVSYGKERPAMLGSNEESWAKNRRAATVL 185
>gi|163786302|ref|ZP_02180750.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein-like protein [Flavobacteriales bacterium
ALC-1]
gi|159878162|gb|EDP72218.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein-like protein [Flavobacteriales bacterium
ALC-1]
Length = 524
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
+ + FD+ S +I+P + ++ + ++ I GH D G ++++ L RA A
Sbjct: 418 NGILFDSGSANIQPQSLGIVRQISQVLMQDESIKLNIIGHTDADGPDDANLKLSKARAAA 477
Query: 109 VFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
V + + ISA R+ G+ P D A+NRR
Sbjct: 478 VKDVLINIYKISADRLTTDGKGETQPVGDNKTTDGKAQNRRVEFV 522
>gi|160876689|ref|YP_001556005.1| OmpA/MotB domain-containing protein [Shewanella baltica OS195]
gi|160862211|gb|ABX50745.1| OmpA/MotB domain protein [Shewanella baltica OS195]
gi|315268889|gb|ADT95742.1| OmpA/MotB domain protein [Shewanella baltica OS678]
Length = 485
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 51/122 (41%), Gaps = 2/122 (1%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRN 96
+ Q + + + FD S + P VL L S+L++H F + GH D+ G R+
Sbjct: 363 TDAISQTGKATLEGLLFDYDSERMLPESKPVLDVLASYLKQHPALSFYVVGHTDDKGERS 422
Query: 97 SSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+ +L RRA AV S ++ G+ P ++ NRR + L+
Sbjct: 423 YNQSLSERRAAAVIKQLSDGFQIPSAQLTAHGNGEYSPVASNTNDAGQKLNRRVELVLRS 482
Query: 156 CR 157
+
Sbjct: 483 DK 484
>gi|170720328|ref|YP_001748016.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619]
gi|169758331|gb|ACA71647.1| OmpA/MotB domain protein [Pseudomonas putida W619]
Length = 230
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEK--HDCDFLIEGHADELGSRNSSIALGLRRAY 107
V F+ S + PAD + L+ + + L++ + GH D +GS + + L RRA+
Sbjct: 122 RDVHFEFDSARLTPADKERLNTISTRLKQEAPSARLSVTGHTDSVGSDSYNQNLSERRAH 181
Query: 108 AVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+V +Y V AS + V G+ P D + NRR + ++
Sbjct: 182 SVTDYLVESGVPRASFVSVVGAGETQPVADNATADGRSMNRRTEIKIE 229
>gi|326942295|gb|AEA18191.1| flagellar motor protein MotB [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 262
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 18/130 (13%), Positives = 45/130 (34%), Gaps = 6/130 (4%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGH 88
+ ++ ++ +++ FD+ ++ + + + S + + + GH
Sbjct: 125 QLSSSFQTKLTEKGLMVTILENILFDSGKADVKLESLGIAKEMSSLLVSASPREITVSGH 184
Query: 89 ADELGSRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
D + N+ A R + + + + YG+ ++
Sbjct: 185 TDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAIGYGEYRSIAPNDTQEGK 244
Query: 144 AKNRRAIVFL 153
AKNRR VF+
Sbjct: 245 AKNRRVEVFI 254
>gi|323495111|ref|ZP_08100198.1| flagellar motor protein MotB [Vibrio brasiliensis LMG 20546]
gi|323310662|gb|EGA63839.1| flagellar motor protein MotB [Vibrio brasiliensis LMG 20546]
Length = 314
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 45/128 (35%), Gaps = 5/128 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ +L +Q + + F S ++P ++ + ++ + GH D
Sbjct: 173 QGAIEVENLGQQIDIRIREKGAFPEGSAFLQPKFRPLVRQIADLVKDIPGVVRVSGHTDN 232
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S+ L +RA +V RG + R++V P E ++N
Sbjct: 233 QRIDSELYRSNWDLSAQRAVSVAQEMEKVRGFNHERLRVRGMADTEPLGPNDTEAQRSRN 292
Query: 147 RRAIVFLK 154
RR + +
Sbjct: 293 RRVEISIM 300
>gi|229138428|ref|ZP_04267017.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST26]
gi|228644965|gb|EEL01208.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST26]
Length = 213
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 53/127 (41%), Gaps = 5/127 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ +N S + D++ FDT +++P +++S L + + ++EGH D
Sbjct: 86 SQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKEIISKLVGFFQSVPNSIVVEGHTDSR 145
Query: 93 GSRNS----SIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
N + L RA + ++ + + R+ Y P V + KNR
Sbjct: 146 PIHNEKFPSNWELSSARAANMIHHLIEVYNVDDKRLAAVGYADTKPVVPNDSPQNWEKNR 205
Query: 148 RAIVFLK 154
R ++++K
Sbjct: 206 RVVIYIK 212
>gi|229175219|ref|ZP_04302735.1| OmpA/MotB domain protein [Bacillus cereus MM3]
gi|228608355|gb|EEK65661.1| OmpA/MotB domain protein [Bacillus cereus MM3]
Length = 234
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 45/128 (35%), Gaps = 6/128 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+ ++ ++ ++V FD+ ++ + + + S + + + GH D
Sbjct: 99 SSSFQTKLTEKGLMVTILENVLFDSGKADVKLESLGIAKEMSSLLVSASPREITVSGHTD 158
Query: 91 ELGSRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ N+ A R + + + + YG+ ++ AK
Sbjct: 159 NVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAIGYGEYRSIAPNDTQEGKAK 218
Query: 146 NRRAIVFL 153
NRR VF+
Sbjct: 219 NRRVEVFI 226
>gi|197335718|ref|YP_002155279.1| outer membrane protein [Vibrio fischeri MJ11]
gi|197317208|gb|ACH66655.1| outer membrane protein [Vibrio fischeri MJ11]
Length = 219
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 51/115 (44%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRN 96
+++ + V F+ YS+ +L N+ LE L+ GH D G N
Sbjct: 97 AEVVEDNVEQKLFARVLFNFDQYSLTERSKYILQNVTEKLETQKDTVLLNGHTDNKGRDN 156
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+I LGL R+ +V + + +G S +++ S+G++ P + NRR +
Sbjct: 157 YNINLGLARSNSVKAFLLDQGASKEQLESYSFGEQQPIDDNTTLEGQHHNRRVDI 211
>gi|89890645|ref|ZP_01202155.1| outer membrane protein [Flavobacteria bacterium BBFL7]
gi|89517560|gb|EAS20217.1| outer membrane protein [Flavobacteria bacterium BBFL7]
Length = 659
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 56/148 (37%), Gaps = 11/148 (7%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDS-----VFFDTSSYSIRPADIQVLSNLGSW 75
+ + +++ + + D ++FD ++IR L + ++
Sbjct: 512 TSATLLQPLAVAKSIDDKVADIKVGDDLNDILDLNMIYFDFDKHNIRYDAEIELQKVLAF 571
Query: 76 LEKHDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
+E + + I H D S +I L RRA + Y + +GI A+R+ YG+
Sbjct: 572 MEAYPNSIIDIRSHTDSRASDGYNIKLSDRRAKSTRAYLIMKGIKANRLTARGYGEYQLV 631
Query: 135 VYGH-----DEDAYAKNRRAIVFLKGCR 157
E+ + NRR+ + +
Sbjct: 632 NECSNGVECTEEQHQLNRRSEFIIMKLK 659
>gi|149276390|ref|ZP_01882534.1| possible outer membrane protein [Pedobacter sp. BAL39]
gi|149232910|gb|EDM38285.1| possible outer membrane protein [Pedobacter sp. BAL39]
Length = 620
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRA 106
V ++FFDT+ + + P + LS L + L+ + I+GH D +G+ + L L RA
Sbjct: 511 VLKNIFFDTNDFKLLPESVSELSTLLNLLKSNPNVQMEIQGHTDNVGNDQLNEQLSLNRA 570
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV+ Y + I R++ YG + P V ED NRR +
Sbjct: 571 KAVYEYLLDNQIDPQRLQYKGYGAKKPVVANDTEDNRRLNRRTSFVI 617
>gi|45656435|ref|YP_000521.1| peptidoglycan associated periplasmic protein [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
gi|45599670|gb|AAS69158.1| peptidoglycan associated periplasmic protein [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
Length = 660
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYA 108
+++FF++ S+ I P L L ++++ + IEGH D +G + ++ L +RA A
Sbjct: 550 NNLFFESKSFQIAPESAPELDRLAEIVKENPDIEIQIEGHTDNIGKKKDNLILSEKRAAA 609
Query: 109 VFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V Y + + R++ +G +P E+A KNRR +
Sbjct: 610 VAEYLFQKHSISKTRIQTKGFGDSVPLSKNDSEEARKKNRRVNFTI 655
>gi|30022590|ref|NP_834221.1| flagellar motor protein MotB [Bacillus cereus ATCC 14579]
gi|206969568|ref|ZP_03230522.1| chemotaxis protein MotB [Bacillus cereus AH1134]
gi|218232559|ref|YP_002369307.1| flagellar motor protein MotB [Bacillus cereus B4264]
gi|296504987|ref|YP_003666687.1| flagellar motor protein MotB [Bacillus thuringiensis BMB171]
gi|29898148|gb|AAP11422.1| Chemotaxis motB protein [Bacillus cereus ATCC 14579]
gi|206735256|gb|EDZ52424.1| chemotaxis protein MotB [Bacillus cereus AH1134]
gi|218160516|gb|ACK60508.1| chemotaxis protein MotB [Bacillus cereus B4264]
gi|296326039|gb|ADH08967.1| flagellar motor protein MotB [Bacillus thuringiensis BMB171]
Length = 262
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 18/130 (13%), Positives = 45/130 (34%), Gaps = 6/130 (4%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGH 88
+ ++ ++ +++ FD+ ++ + + + S + + + GH
Sbjct: 125 QLSSSFQTKLTEKGLMVTILENILFDSGKADVKLESLGIAKEMSSLLVSASPREITVSGH 184
Query: 89 ADELGSRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
D + N+ A R + + + + YG+ ++
Sbjct: 185 TDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAIGYGEYRSIAPNDTQEGK 244
Query: 144 AKNRRAIVFL 153
AKNRR VF+
Sbjct: 245 AKNRRVEVFI 254
>gi|24216384|ref|NP_713865.1| OmpA family protein [Leptospira interrogans serovar Lai str. 56601]
gi|24197668|gb|AAN50883.1| OmpA family protein [Leptospira interrogans serovar Lai str. 56601]
Length = 660
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYA 108
+++FF++ S+ I P L L ++++ + IEGH D +G + ++ L +RA A
Sbjct: 550 NNLFFESKSFQIAPESAPELDRLAEIVKENPDIEIQIEGHTDNIGKKKDNLILSEKRAAA 609
Query: 109 VFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V Y + + R++ +G +P E+A KNRR +
Sbjct: 610 VAEYLFQKHSISKTRIQTKGFGDSVPLSKNDSEEARKKNRRVNFTI 655
>gi|323524556|ref|YP_004226709.1| type IV / VI secretion system protein, DotU family [Burkholderia
sp. CCGE1001]
gi|323381558|gb|ADX53649.1| type IV / VI secretion system protein, DotU family [Burkholderia
sp. CCGE1001]
Length = 442
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 44/113 (38%), Gaps = 4/113 (3%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIA---- 100
S + F + S+ + +++ + + + K ++ G+ D + R+ A
Sbjct: 328 SVTFRGDAMFPPGAASVNASMAPLIAKIAAEIVKVPGKVMVFGYTDNVPIRSRQFASNDA 387
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA V A G+ A R++ G+ P A+NRR + +
Sbjct: 388 LSAERATQVLQMLQASGVPAGRLEAVGRGEAAPVGDNRTAQGRAQNRRVEIAV 440
>gi|228984812|ref|ZP_04144984.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228775010|gb|EEM23404.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 225
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 53/127 (41%), Gaps = 5/127 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ +N S + D++ FDT +++P +++S L + + ++EGH D
Sbjct: 98 SQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKEIISQLVGFFQSVPNPIVVEGHTDSR 157
Query: 93 GSRNS----SIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
N + L RA + ++ + + R+ Y P V + KNR
Sbjct: 158 PIHNDKFPSNWELSSARAANMIHHLIEVYNVDDKRLAAVGYADTKPVVPNDSPQNWEKNR 217
Query: 148 RAIVFLK 154
R ++++K
Sbjct: 218 RVVIYIK 224
>gi|254509011|ref|ZP_05121116.1| flagellar motor protein [Vibrio parahaemolyticus 16]
gi|219548046|gb|EED25066.1| flagellar motor protein [Vibrio parahaemolyticus 16]
Length = 298
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 46/128 (35%), Gaps = 5/128 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ +L +Q + + F S ++P ++ + ++ + GH D
Sbjct: 156 QGAIEVENLGQQIDIRIREKGAFPEGSAFLQPKFRPLVRQIADLVKDIPGIVRVSGHTDN 215
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S+ L +RA +V RG ++ R++V P E ++N
Sbjct: 216 QRIESELYRSNWDLSAQRAVSVAQEMEKVRGFTSQRLRVRGMADTEPLGPNDTEAQRSRN 275
Query: 147 RRAIVFLK 154
RR + +
Sbjct: 276 RRVEISIM 283
>gi|126733987|ref|ZP_01749734.1| OmpA family domain protein [Roseobacter sp. CCS2]
gi|126716853|gb|EBA13717.1| OmpA family domain protein [Roseobacter sp. CCS2]
Length = 312
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 53/141 (37%), Gaps = 5/141 (3%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSS---SVGDSVFFDTSSYSIRPADIQVLSNLGSWLE- 77
+ +++L EQ SV + F+T S + + L L +L
Sbjct: 171 AEAEAAPLRAFGATPDAALAEQLEVVGRSVLSDLSFETGSAQLAAGNYASLQALADYLAG 230
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVY 136
+ GH D GS ++IAL RRA +V V+ ++ +++ G P
Sbjct: 231 APQLRVALVGHTDSSGSLEANIALSKRRAASVLERLVSAYGTSRGQIEAEGMGYLAPIAP 290
Query: 137 GHDEDAYAKNRRAIVFLKGCR 157
E+ NRR V + +
Sbjct: 291 NLTEEGREANRRVEVIVTSTQ 311
>gi|42780820|ref|NP_978067.1| flagellar motor protein MotS [Bacillus cereus ATCC 10987]
gi|42736740|gb|AAS40675.1| chemotaxis protein MotB, putative [Bacillus cereus ATCC 10987]
gi|324325747|gb|ADY21007.1| flagellar motor protein MotS [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 225
Score = 71.4 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 53/127 (41%), Gaps = 5/127 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ +N S + D++ FDT +++P +++S L + + ++EGH D
Sbjct: 98 SQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKEIISKLVGFFQSVPNSIVVEGHTDSR 157
Query: 93 GSRNS----SIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
N + L RA + ++ + + R+ Y P V + KNR
Sbjct: 158 PIHNEKFPSNWELSSARAANMIHHLIEVYNVEDKRLAAVGYADTKPVVPNDSPQNWEKNR 217
Query: 148 RAIVFLK 154
R ++++K
Sbjct: 218 RVVIYIK 224
>gi|163745646|ref|ZP_02153006.1| OmpA domain protein [Oceanibulbus indolifex HEL-45]
gi|161382464|gb|EDQ06873.1| OmpA domain protein [Oceanibulbus indolifex HEL-45]
Length = 641
Score = 71.0 bits (172), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 49/130 (37%), Gaps = 1/130 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHA 89
E E + F+ + +I + + + ++ L++ D I+G+
Sbjct: 475 AGLPTPEECEAEIGEILTIGKITFEPGNATIDASALGTMDDIAEVLKRCGDIPLEIQGYT 534
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G +++L RA +V N AR + S YG+E P E+ NRR
Sbjct: 535 DSQGRETMNLSLSQSRAESVLNELRARRVLTSSFLAKGYGEENPIADNQTEEGREANRRI 594
Query: 150 IVFLKGCRAN 159
L + +
Sbjct: 595 EFRLIQAQTD 604
>gi|295699895|ref|YP_003607788.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
gi|295439108|gb|ADG18277.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
Length = 410
Score = 71.0 bits (172), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 49/128 (38%), Gaps = 2/128 (1%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPAD-IQVLSNLGSWLEKHDCDFLIE 86
++ FD+ ++P ++ L D L+
Sbjct: 275 ALDTAIASYAPPPPPPAVVTLDSMSLFDSGRAQLKPGSTRAMVDALEMIKAHPDKRILVA 334
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
GH D +G+ S++ L RA AV ++ + GI+ ++ + YG P +D A+
Sbjct: 335 GHTDNVGNPQSNLKLSTARAQAVRDWLIDVSGIAETQFAIQGYGDTRPIASNASDDGRAR 394
Query: 146 NRRAIVFL 153
NRR + L
Sbjct: 395 NRRVEITL 402
>gi|229105135|ref|ZP_04235786.1| OmpA/MotB domain protein [Bacillus cereus Rock3-28]
gi|228678316|gb|EEL32542.1| OmpA/MotB domain protein [Bacillus cereus Rock3-28]
Length = 233
Score = 71.0 bits (172), Expect = 4e-11, Method: Composition-based stats.
Identities = 18/120 (15%), Positives = 43/120 (35%), Gaps = 6/120 (5%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSS 98
++ ++ ++V FD+ ++ + + + + + + + GH D + N+
Sbjct: 106 TEKGLMVTILENVLFDSGKADVKLESLGIAKEMSNLLVSASPREITVSGHTDTVPIANAQ 165
Query: 99 IALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
A R + + + + YG+ + AKNRR VF+
Sbjct: 166 FASNWELSTQRAVNFMQVLLQNKDLQPGKFSAIGYGEYRSIAPNDTPEGKAKNRRVEVFI 225
>gi|289207478|ref|YP_003459544.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
gi|288943109|gb|ADC70808.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
Length = 213
Score = 71.0 bits (172), Expect = 4e-11, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 3/109 (2%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDCDFLIEGHADELGSRNSSIALGL 103
++ FD S +RP L L + L+EGH +G + + L
Sbjct: 97 TLSAQALFDFDSADLRPEGRDALRELARSLTADDVEYSSVLVEGHTCTIGPADYNQGLSE 156
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
RRA +V ++ + G+ ++ YG++ P+ + NRR V
Sbjct: 157 RRAQSVADFLASEGVREDDIRTVGYGEDRPTADNSTREGREANRRVEVT 205
>gi|213964216|ref|ZP_03392450.1| V-type H(+)-translocating pyrophosphatase [Capnocytophaga sputigena
Capno]
gi|213953135|gb|EEB64483.1| V-type H(+)-translocating pyrophosphatase [Capnocytophaga sputigena
Capno]
Length = 919
Score = 71.0 bits (172), Expect = 4e-11, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
Query: 50 DSVFFDTSSYSIRPADIQVL-SNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
D +F T S + Q L + + + G+ D GS ++ L RRA +
Sbjct: 811 DRTYFKTGSDELTEGSEQQLKNIVAILKAYPKAAIRLGGYTDNTGSAEGNLKLSERRANS 870
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVY-GHDEDAYAKNRRAIVFL 153
V N VA G + +++ YG+E P ++ AKNRR + L
Sbjct: 871 VLNKLVALGANKAQLSAQGYGQEHPVCPANDTDECKAKNRRIDIRL 916
>gi|188997203|ref|YP_001931454.1| OmpA/MotB domain protein [Sulfurihydrogenibium sp. YO3AOP1]
gi|188932270|gb|ACD66900.1| OmpA/MotB domain protein [Sulfurihydrogenibium sp. YO3AOP1]
Length = 260
Score = 71.0 bits (172), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 59/136 (43%), Gaps = 5/136 (3%)
Query: 23 NLDTKISSPDTVLNESSLQEQF----SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+ K D E + + + + V F +S I+ + L+ + +L+
Sbjct: 120 AQNKKPEKLDIGAKEKESPKTYKSTDAITQPVRVHFYLNSSKIKKEYLPYLNIVAKYLKT 179
Query: 79 HD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
H I+G+ D +GS+ + L L+RA V Y V G+S +R+ + GK V
Sbjct: 180 HPDVKVKIKGYTDNIGSKKYNDKLALKRAKTVKQYLVKLGVSPNRIMIDGVGKSEYIVSN 239
Query: 138 HDEDAYAKNRRAIVFL 153
++E NRRA ++
Sbjct: 240 NNELDRFTNRRAEFYI 255
>gi|114763629|ref|ZP_01443023.1| hypothetical protein 1100011001335_R2601_16020 [Pelagibaca
bermudensis HTCC2601]
gi|114543630|gb|EAU46643.1| hypothetical protein R2601_16020 [Roseovarius sp. HTCC2601]
Length = 465
Score = 71.0 bits (172), Expect = 4e-11, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 48/131 (36%), Gaps = 4/131 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ + ++ S + + + F +S ++ P +V+ + L + ++
Sbjct: 331 QPEIDEGLVTVESSGNTLTVQISGANMFAPASDTLEPRFAEVVDRVAGALNEEGGQIIVA 390
Query: 87 GHADELGSRNSSI----ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
GH+D + + AL L RA V + +SR+ P +
Sbjct: 391 GHSDNIPINTARFPSNLALSLARAKFVMERISQTLVDSSRISAEGRADREPIASNDTPEG 450
Query: 143 YAKNRRAIVFL 153
AKNRR V L
Sbjct: 451 RAKNRRIEVIL 461
>gi|319791244|ref|YP_004152884.1| type IV / vi secretion system protein, dotu family [Variovorax
paradoxus EPS]
gi|315593707|gb|ADU34773.1| type IV / VI secretion system protein, DotU family [Variovorax
paradoxus EPS]
Length = 454
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 45/131 (34%), Gaps = 5/131 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ ++ + ++ + FF + S A + VL +G L + D LI
Sbjct: 299 EPEVKQGLVTVTDEADRSVVRLRGDSFFGSGSAEPMAASLPVLRRIGQALAEVKGDVLIT 358
Query: 87 GHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
GH+D S+ L RA AV +RM+ P
Sbjct: 359 GHSDNQPIRSLRYPSNWHLSAARADAVKGALTTLVD-PARMRSDGKADAEPVAANDTPAN 417
Query: 143 YAKNRRAIVFL 153
A+NRR + L
Sbjct: 418 RARNRRVDIVL 428
>gi|218899667|ref|YP_002448078.1| chemotaxis protein MotB [Bacillus cereus G9842]
gi|218542530|gb|ACK94924.1| chemotaxis protein MotB [Bacillus cereus G9842]
Length = 262
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 18/130 (13%), Positives = 45/130 (34%), Gaps = 6/130 (4%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGH 88
+ ++ ++ +++ FD+ ++ + + + S + + + GH
Sbjct: 125 QLSSSFQTKLTEKGLMVTILENILFDSGKADVKLESLGIAKEMSSLLVSASPREITVSGH 184
Query: 89 ADELGSRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
D + N+ A R + + + + YG+ ++
Sbjct: 185 TDNVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAIGYGEYRSIAPNDTQEGK 244
Query: 144 AKNRRAIVFL 153
AKNRR VF+
Sbjct: 245 AKNRRVEVFI 254
>gi|146312725|ref|YP_001177799.1| putative outer membrane lipoprotein [Enterobacter sp. 638]
gi|145319601|gb|ABP61748.1| OmpA/MotB domain protein [Enterobacter sp. 638]
Length = 161
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 28/159 (17%), Positives = 57/159 (35%), Gaps = 5/159 (3%)
Query: 1 MQYSTIFIILSAITMMSIS---GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS 57
M + +L A T+++ + + + + +S + D + F +
Sbjct: 1 MFRRYLAPVLLASTILAGCHAPPQGKFTPEQVAAMKSYGFNEMNGDWSLGLSDKILFGKN 60
Query: 58 SYSIRPADIQVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
+R Q + ++ S L ++GH D G + + +L L+RA V + +
Sbjct: 61 ESQLRAESEQQIQSMASLLAGTGLTHARMDGHTDNYGEESYNQSLSLKRANVVADAWAKG 120
Query: 117 GISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ GK+ P A+NRR V +
Sbjct: 121 ANIPRSNLTTQGLGKKYPVASNSTSQGRAENRRVAVVIS 159
>gi|91202869|emb|CAJ72508.1| similar to flagellar motor protein MotB [Candidatus Kuenenia
stuttgartiensis]
Length = 223
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 47/130 (36%), Gaps = 8/130 (6%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
++ E + + FD+ +I+ L + +LE++ I+GH D
Sbjct: 78 GGGVSVRDTFEGPVILFPEMILFDSGMATIKAHGEDALRKMARFLEENPASSLRIDGHTD 137
Query: 91 ELGS------RNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAY 143
+S+ L RA +VF++ +G R+ + +G P
Sbjct: 138 SDPIIKTKHLWDSNHHLSAARALSVFHFLTKKGNIPEQRIHIAGFGPNRPIAPNTTPAGK 197
Query: 144 AKNRRAIVFL 153
+NRR +
Sbjct: 198 KENRRVEFLI 207
>gi|30261729|ref|NP_844106.1| flagellar motor protein MotS [Bacillus anthracis str. Ames]
gi|47526945|ref|YP_018294.1| flagellar motor protein MotS [Bacillus anthracis str. 'Ames
Ancestor']
gi|49184555|ref|YP_027807.1| flagellar motor protein MotS [Bacillus anthracis str. Sterne]
gi|165869455|ref|ZP_02214114.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0488]
gi|167633407|ref|ZP_02391732.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0442]
gi|167639130|ref|ZP_02397403.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0193]
gi|170686155|ref|ZP_02877377.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0465]
gi|170706447|ref|ZP_02896907.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0389]
gi|177650324|ref|ZP_02933291.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0174]
gi|190566282|ref|ZP_03019200.1| putative chemotaxis protein MotB [Bacillus anthracis
Tsiankovskii-I]
gi|218902843|ref|YP_002450677.1| putative chemotaxis protein MotB [Bacillus cereus AH820]
gi|225863587|ref|YP_002748965.1| putative chemotaxis protein MotB [Bacillus cereus 03BB102]
gi|227815517|ref|YP_002815526.1| putative chemotaxis protein MotB [Bacillus anthracis str. CDC 684]
gi|229604338|ref|YP_002866130.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0248]
gi|254683216|ref|ZP_05147077.1| flagellar motor protein MotS [Bacillus anthracis str. CNEVA-9066]
gi|254723805|ref|ZP_05185591.1| flagellar motor protein MotS [Bacillus anthracis str. A1055]
gi|254734568|ref|ZP_05192280.1| flagellar motor protein MotS [Bacillus anthracis str. Western North
America USA6153]
gi|254740977|ref|ZP_05198665.1| flagellar motor protein MotS [Bacillus anthracis str. Kruger B]
gi|254755218|ref|ZP_05207252.1| flagellar motor protein MotS [Bacillus anthracis str. Vollum]
gi|254759755|ref|ZP_05211779.1| flagellar motor protein MotS [Bacillus anthracis str. Australia 94]
gi|30255957|gb|AAP25592.1| putative chemotaxis protein MotB [Bacillus anthracis str. Ames]
gi|47502093|gb|AAT30769.1| putative chemotaxis protein MotB [Bacillus anthracis str. 'Ames
Ancestor']
gi|49178482|gb|AAT53858.1| chemotaxis protein MotB, putative [Bacillus anthracis str. Sterne]
gi|164714895|gb|EDR20413.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0488]
gi|167512920|gb|EDR88293.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0193]
gi|167531445|gb|EDR94123.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0442]
gi|170128545|gb|EDS97412.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0389]
gi|170669852|gb|EDT20593.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0465]
gi|172083468|gb|EDT68528.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0174]
gi|190562417|gb|EDV16384.1| putative chemotaxis protein MotB [Bacillus anthracis
Tsiankovskii-I]
gi|218535723|gb|ACK88121.1| putative chemotaxis protein MotB [Bacillus cereus AH820]
gi|225787259|gb|ACO27476.1| putative chemotaxis protein MotB [Bacillus cereus 03BB102]
gi|227002562|gb|ACP12305.1| putative chemotaxis protein MotB [Bacillus anthracis str. CDC 684]
gi|229268746|gb|ACQ50383.1| putative chemotaxis protein MotB [Bacillus anthracis str. A0248]
Length = 225
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 53/127 (41%), Gaps = 5/127 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ +N S + D++ FDT +++P +++S L + + ++EGH D
Sbjct: 98 SQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKEIISQLVGFFQSVPNPIVVEGHTDSR 157
Query: 93 GSRNS----SIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
N + L RA + ++ + + R+ Y P V + KNR
Sbjct: 158 PIHNDKFPSNWELSSARAANMIHHLIEVYNVDDKRLAAVGYADTKPVVPNDSPQNWEKNR 217
Query: 148 RAIVFLK 154
R ++++K
Sbjct: 218 RVVIYIK 224
>gi|262378528|ref|ZP_06071685.1| OmpA/MotB [Acinetobacter radioresistens SH164]
gi|262299813|gb|EEY87725.1| OmpA/MotB [Acinetobacter radioresistens SH164]
Length = 485
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
+ + F + S + + +L + + ++GH D GS + L ++RA A
Sbjct: 361 EVIHFASGSAQVPDVNKPILDQAAALLQRVPNVVVTVKGHTDAEGSEAVNNNLSVQRAQA 420
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
V NY V+RG+S S+++ YG++ P +NRR +
Sbjct: 421 VVNYLVSRGVSPSKLQALGYGQDQPVTDNATSQGKFQNRRIEFEILNT 468
>gi|239906031|ref|YP_002952770.1| putative peptidoglycan-associated lipoprotein [Desulfovibrio
magneticus RS-1]
gi|239795895|dbj|BAH74884.1| putative peptidoglycan-associated lipoprotein [Desulfovibrio
magneticus RS-1]
Length = 171
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 40/135 (29%), Positives = 58/135 (42%), Gaps = 1/135 (0%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-L 76
SG + + + + S+ + V F S ++ Q L+
Sbjct: 33 GSGTSWEEQERARLEQERLLREKLGAASNELAQMVHFALDSSNLSAEARQNLTRKAEILR 92
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ ++EG+ D+ G+ ++ALG RRA A Y V GI A R+ SYGKE P
Sbjct: 93 QYPQIKLIVEGNCDQRGTAEYNLALGERRAQAAAQYLVNLGIGADRLSTVSYGKERPLDP 152
Query: 137 GHDEDAYAKNRRAIV 151
G E AYAKNRR
Sbjct: 153 GTSEAAYAKNRRDEF 167
>gi|144898731|emb|CAM75595.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Magnetospirillum gryphiswaldense MSR-1]
Length = 174
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 44/117 (37%), Positives = 71/117 (60%), Gaps = 1/117 (0%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRN 96
+ +Q +F +SVGD V++ T S+S+ L ++ IEGHADE G+R
Sbjct: 56 AQMQREFQTSVGDRVYYGTDSHSLNADAKATLDRQAAFLRRYPTVMLRIEGHADERGTRE 115
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ALG RRA +V Y +A+G+++ R+ +++GKE P G +E A+A+NRRAI +
Sbjct: 116 YNLALGDRRAQSVKEYLLAQGVASGRLSTSTFGKERPEANGANEQAWAQNRRAISVI 172
>gi|124002652|ref|ZP_01687504.1| OmpA/MotB [Microscilla marina ATCC 23134]
gi|123991880|gb|EAY31267.1| OmpA/MotB [Microscilla marina ATCC 23134]
Length = 352
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 1/105 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
V F S I+ +L + + + +EGH D +G S++ L RA
Sbjct: 234 ASKVLFAFSKAEIKTVSFSILDEVVRLLKKYPKSNIHLEGHTDNVGKDQSNLILSKNRAA 293
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+V YF+ +GI+A+R+ +G++ P NRR +
Sbjct: 294 SVRQYFINKGINANRITSIGHGEQRPIDTNTTAKGRQNNRRVDMV 338
>gi|312879597|ref|ZP_07739397.1| OmpA/MotB domain protein [Aminomonas paucivorans DSM 12260]
gi|310782888|gb|EFQ23286.1| OmpA/MotB domain protein [Aminomonas paucivorans DSM 12260]
Length = 242
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 44/127 (34%), Gaps = 5/127 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ Q + S+ + F + P +VL +G L+ +EGH D
Sbjct: 109 QKEITVKVNQRGVTVSLSEQFLFAPGGADLSPLSRRVLFKIGQILKTFPNQLAVEGHTDN 168
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ L RA V +Y S +R++ YG P V + A N
Sbjct: 169 APLRGGLYKDNWGLSAGRAAVVASYLAGTVGLSPNRLEAVGYGSAKPIVPNDTPEHRALN 228
Query: 147 RRAIVFL 153
RR + L
Sbjct: 229 RRVDLVL 235
>gi|296536326|ref|ZP_06898436.1| outer membrane protein [Roseomonas cervicalis ATCC 49957]
gi|296263348|gb|EFH09863.1| outer membrane protein [Roseomonas cervicalis ATCC 49957]
Length = 368
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 1/104 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
VFFD + Q+++ + GHAD GS + L RRA AV
Sbjct: 265 VFFDFDRADLTDRARQIIAEAAQNSSRVQATRIEVAGHADRAGSPQYNQRLSQRRADAVA 324
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
V G++ S + V ++G+ P V D +NRR + L+
Sbjct: 325 AELVRLGVARSAITVQAFGESRPLVPTADGVREPQNRRVEIVLR 368
>gi|332994178|gb|AEF04233.1| TolC family type I secretion outer membrane protein [Alteromonas
sp. SN2]
Length = 616
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 55/141 (39%), Gaps = 3/141 (2%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
D +++P + + + Q +S ++ F ++S I P + LS +
Sbjct: 473 FGCEASDPEPQTMNTPASAADFTLDDAQVLASFSINISFASNSSKISPEYVSSLSQVIDA 532
Query: 76 -LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA--RGISASRMKVTSYGKEM 132
+ + +I GHA G + L RRA AV + I + R+ YG+
Sbjct: 533 LEKYDNAGVIIHGHASLDGDAAYNQRLSERRASAVAALLIESTNDIDSRRITSVGYGETR 592
Query: 133 PSVYGHDEDAYAKNRRAIVFL 153
P V A AKNRR +
Sbjct: 593 PLVDEESPAANAKNRRIEATI 613
>gi|153829691|ref|ZP_01982358.1| OmpA family protein [Vibrio cholerae 623-39]
gi|148874812|gb|EDL72947.1| OmpA family protein [Vibrio cholerae 623-39]
Length = 207
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIA 100
+ + ++V F+T S + A Q L + +L D ++EGH D GS +
Sbjct: 90 DYPMIKLNNTVRFETGSAKVSMASKQWLDTVARFLATESGIDIVLEGHTDNTGSEKLNDK 149
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
L RRA AV V ++ + + +G+ +P+ ++ A NRR +
Sbjct: 150 LAERRANAVKAALVQSRVAQNAIYTRGFGENVPACTNSTKNGRACNRRVEI 200
>gi|75761764|ref|ZP_00741702.1| Chemotaxis motB protein [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|74490749|gb|EAO54027.1| Chemotaxis motB protein [Bacillus thuringiensis serovar israelensis
ATCC 35646]
Length = 256
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 18/128 (14%), Positives = 45/128 (35%), Gaps = 6/128 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+ ++ ++ +++ FD+ ++ + + + S + + + GH D
Sbjct: 127 SSSFQTKLTEKGLMVTILENILFDSGKADVKLESLGIAKEMSSLLVSASPREITVSGHTD 186
Query: 91 ELGSRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ N+ A R + + + + YG+ ++ AK
Sbjct: 187 NVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAIGYGEYRSIAPNDTQEGKAK 246
Query: 146 NRRAIVFL 153
NRR VF+
Sbjct: 247 NRRVEVFI 254
>gi|255319448|ref|ZP_05360662.1| outer membrane protein [Acinetobacter radioresistens SK82]
gi|255303388|gb|EET82591.1| outer membrane protein [Acinetobacter radioresistens SK82]
Length = 486
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
+ + F + S + + +L + + ++GH D GS + L ++RA A
Sbjct: 362 EVIHFASGSAQVPDVNKPILDQAAALLQRVPNVVVTVKGHTDAEGSEAVNNNLSVQRAQA 421
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
V NY V+RG+S S+++ YG++ P +NRR +
Sbjct: 422 VVNYLVSRGVSPSKLQALGYGQDQPVTDNATSQGKFQNRRIEFEILNT 469
>gi|291613389|ref|YP_003523546.1| OmpA/MotB domain protein [Sideroxydans lithotrophicus ES-1]
gi|291583501|gb|ADE11159.1| OmpA/MotB domain protein [Sideroxydans lithotrophicus ES-1]
Length = 163
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/158 (22%), Positives = 74/158 (46%), Gaps = 9/158 (5%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESS--------LQEQFSSSVGDSVFF 54
+ +IL+++ +++ + +T ++ + ++ L + S +F
Sbjct: 1 MKKLAVILASLMVVACASTQKTNTSQANENNATASAAAAKVDLGKLNAEIQQMEKQSDYF 60
Query: 55 DTSSYSIRPADIQVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYF 113
D + Y+++ + V+ +L+ H D ++G+ADE GS ++ LG RA AV
Sbjct: 61 DFNKYTVKSEYMNVIQKEAEFLKTHKNDVVTLQGNADERGSEKYNLGLGENRADAVAKVL 120
Query: 114 VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
G+ A ++K+ S GK+ P + H E + +NRR
Sbjct: 121 EKDGVPADQIKMVSLGKDKPRLTCHKEKCWKENRRVDF 158
>gi|332828855|gb|EGK01538.1| hypothetical protein HMPREF9455_02070 [Dysgonomonas gadei ATCC
BAA-286]
Length = 290
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 46/114 (40%), Gaps = 6/114 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHAD----ELGSRNSSIA 100
S+ D++ + + SY I ++LS + + + D D L+EG+ D + ++
Sbjct: 154 ISLADNMLYRSGSYEISEKAGEILSKIAKIILDYKDYDVLVEGNTDTDPISRPNIRNNWD 213
Query: 101 LGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V + RM G+ P + A NRR + +
Sbjct: 214 LSTLRASSVVQALQNNYGVDPKRMTAGGRGEYNPVASNSTIEGKALNRRTQIII 267
>gi|327485675|gb|AEA80081.1| Protein F-like protein [Vibrio cholerae LMA3894-4]
Length = 182
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 1/111 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIA 100
+ + ++V F+T S + A Q L + +L D ++EGH D GS +
Sbjct: 65 DYPMIKLNNTVRFETGSAKVSMASKQWLDTVARFLATESGIDIVLEGHTDNTGSEKLNDK 124
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
L RRA AV V + + + +G+ +P+ ++ A NRR +
Sbjct: 125 LAERRANAVKAALVQSRVVQNAIYTRGFGENVPACTNSTKNGRACNRRVEI 175
>gi|49187402|ref|YP_030654.1| chemotaxis protein motB, C-terminus [Bacillus anthracis str.
Sterne]
gi|227817292|ref|YP_002817301.1| chemotaxis protein MotB [Bacillus anthracis str. CDC 684]
gi|254736614|ref|ZP_05194320.1| chemotaxis protein MotB [Bacillus anthracis str. Western North
America USA6153]
gi|254741652|ref|ZP_05199339.1| chemotaxis protein MotB [Bacillus anthracis str. Kruger B]
gi|49181329|gb|AAT56705.1| chemotaxis protein motB, C-terminus [Bacillus anthracis str.
Sterne]
gi|227002900|gb|ACP12643.1| chemotaxis protein MotB [Bacillus anthracis str. CDC 684]
Length = 156
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 45/128 (35%), Gaps = 6/128 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+ ++ ++ ++V FD+ ++ + + + S + + + GH D
Sbjct: 21 SSSFQTKLTEKGLMVTILENVLFDSGKADVKLESLGIAKEMSSLLVSASPREITVSGHTD 80
Query: 91 ELGSRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ N+ A R + + + + YG+ ++ AK
Sbjct: 81 NVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAIGYGEYRSIAPNDTQEGKAK 140
Query: 146 NRRAIVFL 153
NRR VF+
Sbjct: 141 NRRVEVFI 148
>gi|117918603|ref|YP_867795.1| OmpA/MotB domain-containing protein [Shewanella sp. ANA-3]
gi|117610935|gb|ABK46389.1| OmpA/MotB domain protein [Shewanella sp. ANA-3]
Length = 487
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 2/119 (1%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRN 96
+ E + + F+ S + P V+ L S+L+ + F + GH D+ G++
Sbjct: 365 TDQIEAKGHVALEGLLFEYDSDKLLPEAQPVVEVLASYLKANPKRAFYVVGHTDDKGNQA 424
Query: 97 SSIALGLRRAYAVFNYFV-ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ L RRA A+ + GI +++ G+ P DE +NRR + L+
Sbjct: 425 YNQGLSQRRAVAIVKLLTTSHGIQTQQLEAVGIGEHAPVASNSDEAGQQQNRRVELVLR 483
>gi|62901665|gb|AAY18798.1| OmpA [Cronobacter sakazakii]
Length = 347
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L L S L + D ++ G D +GS + L
Sbjct: 217 TLKSDVLFNFNKATLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSE 276
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
+RA +V +Y +++GI ++++ G+ P + A A +RR + +K
Sbjct: 277 KRAQSVVDYLISKGIPSNKISARGMGESNPVTGNTCDNVKARAALIDCLGPDRRVEIEVK 336
Query: 155 GCR 157
G +
Sbjct: 337 GVK 339
>gi|89897844|ref|YP_514954.1| outer membrane protein [Chlamydophila felis Fe/C-56]
gi|89331216|dbj|BAE80809.1| outer membrane protein [Chlamydophila felis Fe/C-56]
Length = 191
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Query: 50 DSVFFDTSSYSIRPADIQVLSN--LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++ F T SY+I+ + + + + + IEGH DE G+ ++ALG RRA
Sbjct: 83 RNITFATDSYTIKGEENLAILSSLVRQMQKSPKTTLYIEGHTDERGAAAYNLALGARRAN 142
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV + + +GIS R+ SYGKE P GH+E A+ +NRR +
Sbjct: 143 AVKQHLIKQGISPERLFTISYGKEQPINSGHNELAWQQNRRTEFKV 188
>gi|229155299|ref|ZP_04283410.1| OmpA/MotB domain protein [Bacillus cereus ATCC 4342]
gi|228628224|gb|EEK84940.1| OmpA/MotB domain protein [Bacillus cereus ATCC 4342]
Length = 213
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 53/127 (41%), Gaps = 5/127 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ +N S + D++ FDT +++P +++S L + + ++EGH D
Sbjct: 86 SQVNVYREDTGVSVVIIDNLIFDTGDANVKPEAKEIISQLVGFFQSVPNPIVVEGHTDSR 145
Query: 93 GSRNS----SIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
N + L RA + ++ + + R+ Y P V + KNR
Sbjct: 146 PIHNDKFPSNWELSSARAANMIHHLIEVYNVDDKRLAAVGYADTKPVVPNDSPQNWEKNR 205
Query: 148 RAIVFLK 154
R ++++K
Sbjct: 206 RVVIYIK 212
>gi|259908883|ref|YP_002649239.1| outer membrane protein A [Erwinia pyrifoliae Ep1/96]
gi|224964505|emb|CAX56015.1| Outer membrane protein A [Erwinia pyrifoliae Ep1/96]
gi|283478876|emb|CAY74792.1| Outer membrane protein A precursor [Erwinia pyrifoliae DSM 12163]
Length = 355
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 30/158 (18%), Positives = 63/158 (39%), Gaps = 12/158 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
++ + +S D + + E ++ V F + +++P Q L
Sbjct: 190 SMLSVGVSYRFGQDDVAPVVAPAPAPAPVVETKRFTLKSDVLFTFNKANLKPEGQQALDQ 249
Query: 72 LGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L + L + D ++ G+ D +GS + L +RA +V +Y V++GI ++++
Sbjct: 250 LYTQLSNLDPKDGSVVVLGYTDRIGSEQYNQKLSEKRAQSVVDYLVSKGIPSNKISARGE 309
Query: 129 GKEMPS--VYGHDEDAYAK-------NRRAIVFLKGCR 157
G+ P A +RR + +KG +
Sbjct: 310 GESNPVTGNTCDSVKGRAALIDCLSPDRRVEIQVKGIK 347
>gi|167818291|ref|ZP_02449971.1| hypothetical protein Bpse9_24346 [Burkholderia pseudomallei 91]
gi|167913436|ref|ZP_02500527.1| hypothetical protein Bpse112_23310 [Burkholderia pseudomallei 112]
Length = 393
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 43/127 (33%), Gaps = 4/127 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
L+ + S + F + + PA ++ + + + K + G+ D
Sbjct: 265 AAGTLSVEENARRSSVTFRGDAMFAPGAAGVNPAMGPLIRKIAAEIAKVPGKVTVRGYTD 324
Query: 91 ELGSRNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
++ A L RA V + G+ ASR++ G P A N
Sbjct: 325 NQPIKSRQFASNEALSEERATQVMQMLQSAGVPASRLEALGKGGAEPIGDNRTPQGRALN 384
Query: 147 RRAIVFL 153
RR + +
Sbjct: 385 RRVEITV 391
>gi|167589365|ref|ZP_02381753.1| OmpA family domain protein [Burkholderia ubonensis Bu]
Length = 333
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 53/134 (39%), Gaps = 5/134 (3%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSS---VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
+ + V++ S+LQ+ +++ ++FDT ++P L + L +
Sbjct: 198 VKPMQTGQVKVMDSSALQKGLAATGKVALYGIYFDTDKAQVKPESKPQLDEMAKLLTGNP 257
Query: 81 C-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGH 138
I GH D G+ + L +RA AV + I+ +R+ P
Sbjct: 258 ALKVYIVGHTDNQGAFARNADLSQKRAEAVAQALASTYRIAPARLVAKGVASLSPVASNG 317
Query: 139 DEDAYAKNRRAIVF 152
D+ A+NRR +
Sbjct: 318 DDAGRAQNRRVELV 331
>gi|301056021|ref|YP_003794232.1| motility protein B [Bacillus anthracis CI]
gi|300378190|gb|ADK07094.1| motility protein B [Bacillus cereus biovar anthracis str. CI]
Length = 262
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 46/128 (35%), Gaps = 6/128 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+ ++ ++ ++V FD+ ++ + + + S + + + GH D
Sbjct: 127 SSSFQTKLTEKGLMVTILENVLFDSGKADVKLESLGIAKEMSSLLVSASPREITVSGHTD 186
Query: 91 ELGSRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ N+ A R + + + + YG+ + ++ AK
Sbjct: 187 NVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAIGYGEYRSIAPNNTQEGKAK 246
Query: 146 NRRAIVFL 153
NRR VF+
Sbjct: 247 NRRVEVFI 254
>gi|317133447|ref|YP_004092761.1| OmpA/MotB domain protein [Ethanoligenens harbinense YUAN-3]
gi|315471426|gb|ADU28030.1| OmpA/MotB domain protein [Ethanoligenens harbinense YUAN-3]
Length = 259
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 50/133 (37%), Gaps = 5/133 (3%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFL 84
+ ++ SS + ++ D+ + S + ++ +G + + +
Sbjct: 103 VAQAGLQKNVDLSSTSKGLVITLKDNTLYTPGSAVMNQPGQDLVLRIGDALKQVNYALII 162
Query: 85 IEGHADELGSRNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+EGH D N+ L RA V + RG+ A+++ G +P
Sbjct: 163 VEGHTDSDPIHNAQFQDNIELSSARADNVERALIGRGLDAAKIAAMGRGDTVPVAPNDTP 222
Query: 141 DAYAKNRRAIVFL 153
AKNRR ++ +
Sbjct: 223 ANKAKNRRVVITI 235
>gi|238916758|ref|YP_002930275.1| chemotaxis protein MotB [Eubacterium eligens ATCC 27750]
gi|238872118|gb|ACR71828.1| chemotaxis protein MotB [Eubacterium eligens ATCC 27750]
Length = 266
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 60/143 (41%), Gaps = 6/143 (4%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW- 75
S++ S + ++ + +V + FD+ + P + +L +
Sbjct: 118 SMAQEIKDKLTASGVADQIEVTAYSKYVMLNVNGGILFDSGKAELTPQALTLLDKVADAL 177
Query: 76 LEKHDCDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGK 130
+E D IEGH D + +++ L L RAY+VF++FV+ + + M + G
Sbjct: 178 IEYDDNVITIEGHTDNVPINTSRYPNNMMLSLYRAYSVFDFFVSDKGFSDKTMSSSGRGD 237
Query: 131 EMPSVYGHDEDAYAKNRRAIVFL 153
+P + A+NRR + +
Sbjct: 238 AVPIADNGTPEGRAQNRRVEIKV 260
>gi|49478673|ref|YP_038563.1| flagellar motor protein MotB [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|196034432|ref|ZP_03101841.1| chemotaxis protein MotB [Bacillus cereus W]
gi|49330229|gb|AAT60875.1| motility protein B [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|195992974|gb|EDX56933.1| chemotaxis protein MotB [Bacillus cereus W]
Length = 262
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 46/128 (35%), Gaps = 6/128 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+ ++ ++ ++V FD+ ++ + + + S + + + GH D
Sbjct: 127 SSSFQTKLTEKGLMVTILENVLFDSGKADVKLESLGIAKEMSSLLVSASPREITVSGHTD 186
Query: 91 ELGSRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ N+ A R + + + + YG+ + ++ AK
Sbjct: 187 NVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAIGYGEYRSIAPNNTQEGKAK 246
Query: 146 NRRAIVFL 153
NRR VF+
Sbjct: 247 NRRVEVFI 254
>gi|228917149|ref|ZP_04080707.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228929558|ref|ZP_04092577.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228935820|ref|ZP_04098632.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228948234|ref|ZP_04110518.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|229093607|ref|ZP_04224708.1| OmpA/MotB domain protein [Bacillus cereus Rock3-42]
gi|229124075|ref|ZP_04253267.1| OmpA/MotB domain protein [Bacillus cereus 95/8201]
gi|228659377|gb|EEL15025.1| OmpA/MotB domain protein [Bacillus cereus 95/8201]
gi|228689816|gb|EEL43622.1| OmpA/MotB domain protein [Bacillus cereus Rock3-42]
gi|228811592|gb|EEM57929.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228823877|gb|EEM69697.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228830137|gb|EEM75755.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228842567|gb|EEM87657.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
Length = 234
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 45/128 (35%), Gaps = 6/128 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+ ++ ++ ++V FD+ ++ + + + S + + + GH D
Sbjct: 99 SSSFQTKLTEKGLMVTILENVLFDSGKADVKLESLGIAKEMSSLLVSASPREITVSGHTD 158
Query: 91 ELGSRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ N+ A R + + + + YG+ ++ AK
Sbjct: 159 NVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAIGYGEYRSIAPNDTQEGKAK 218
Query: 146 NRRAIVFL 153
NRR VF+
Sbjct: 219 NRRVEVFI 226
>gi|229195941|ref|ZP_04322694.1| OmpA/MotB domain protein [Bacillus cereus m1293]
gi|228587500|gb|EEK45565.1| OmpA/MotB domain protein [Bacillus cereus m1293]
Length = 213
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 53/127 (41%), Gaps = 5/127 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ +N S + D++ FDT +++P +++S L + + ++EGH D
Sbjct: 86 SQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKEIISKLVGFFQSVPNSIVVEGHTDSR 145
Query: 93 GSRNS----SIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
N + L RA + ++ + + R+ Y P V + KNR
Sbjct: 146 PIHNEKFPSNWELSSARAANMIHHLIEVYNVEDKRLAAVGYADTKPVVPNDSPQNWEKNR 205
Query: 148 RAIVFLK 154
R ++++K
Sbjct: 206 RVVIYIK 212
>gi|262168510|ref|ZP_06036206.1| protein F-related protein [Vibrio cholerae RC27]
gi|262023039|gb|EEY41744.1| protein F-related protein [Vibrio cholerae RC27]
Length = 204
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIA 100
+ + ++V F+T S + A Q L + +L D ++EGH D GS +
Sbjct: 87 DYPMIKLNNTVRFETGSAKVSMASKQWLDTVARFLATESGIDIVLEGHTDNTGSEKLNDK 146
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
L RRA AV V ++ + + +G+ +P+ ++ A NRR +
Sbjct: 147 LAERRANAVKAALVQSRVAQNAIYTRGFGENVPACTNSTKNGRACNRRVEI 197
>gi|84394101|ref|ZP_00992836.1| protein F-related protein [Vibrio splendidus 12B01]
gi|84375292|gb|EAP92204.1| protein F-related protein [Vibrio splendidus 12B01]
Length = 211
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 1/111 (0%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALG 102
+ V F T S PA Q L LGS+ ++ D D +IEGH D GS + L
Sbjct: 97 VMVKLEQHVNFKTGSAFPEPAYNQWLDTLGSYLSQRQDIDVVIEGHTDNTGSDRVNAPLS 156
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA V + +S+ + +G+ +P+ A NRR + L
Sbjct: 157 ELRAKEVKARLESNYVSSRAIYTRGFGEYVPACTNASPQGKACNRRVELML 207
>gi|326773949|ref|ZP_08233231.1| hypothetical protein HMPREF0059_02355 [Actinomyces viscosus C505]
gi|326636088|gb|EGE36992.1| hypothetical protein HMPREF0059_02355 [Actinomyces viscosus C505]
Length = 505
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 3/136 (2%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD--CDFLI 85
+ D + + + + ++ V F + S + P L + L ++ I
Sbjct: 190 ARALDNSTSTHTGGKDITVTLASDVTFASDSADLAPGAEAQLKTVAGQLAQYPDGGTLTI 249
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYA 144
GH D++ + L +RA AV + V+ G+ P V ++A A
Sbjct: 250 VGHTDDVQDDAYNQTLSEKRANAVKTRLAQLTTLDKWQTSVSGKGESEPKVKDTSDEARA 309
Query: 145 KNRRAIVFLKGCRANT 160
NRR + L T
Sbjct: 310 VNRRVEITLTPTGGTT 325
>gi|59711130|ref|YP_203906.1| outer membrane protein [Vibrio fischeri ES114]
gi|59479231|gb|AAW85018.1| outer membrane protein [Vibrio fischeri ES114]
Length = 219
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 3/123 (2%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRN 96
+++ + V F+ YS+ +L ++ LE L+ GH D G N
Sbjct: 97 AEVVEDNVEQKLFARVLFNFDQYSLTERSKYILQSVTEKLETQKDTVLLNGHTDNKGREN 156
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
+I LGL R+ +V + +A+G S +++ S+G++ P + NRR +
Sbjct: 157 YNINLGLARSNSVKAFLLAQGASKEQLESYSFGEQQPIDDNTTLEGQHHNRRVDIE---K 213
Query: 157 RAN 159
+AN
Sbjct: 214 KAN 216
>gi|49480957|ref|YP_035848.1| flagellar motor protein MotS [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|52143729|ref|YP_083099.1| flagellar motor protein MotS [Bacillus cereus E33L]
gi|196033392|ref|ZP_03100804.1| putative chemotaxis protein MotB [Bacillus cereus W]
gi|196039124|ref|ZP_03106431.1| putative chemotaxis protein MotB [Bacillus cereus NVH0597-99]
gi|196045046|ref|ZP_03112279.1| putative chemotaxis protein MotB [Bacillus cereus 03BB108]
gi|49332513|gb|AAT63159.1| chemotaxis motB protein, OmpA family [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|51977198|gb|AAU18748.1| chemotaxis motB protein, OmpA family [Bacillus cereus E33L]
gi|195993826|gb|EDX57782.1| putative chemotaxis protein MotB [Bacillus cereus W]
gi|196024048|gb|EDX62722.1| putative chemotaxis protein MotB [Bacillus cereus 03BB108]
gi|196030269|gb|EDX68869.1| putative chemotaxis protein MotB [Bacillus cereus NVH0597-99]
Length = 225
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 53/127 (41%), Gaps = 5/127 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ +N S + D++ FDT +++P +++S L + + ++EGH D
Sbjct: 98 SQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKEIISQLVGFFQSVPNPIVVEGHTDSR 157
Query: 93 GSRNS----SIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
N + L RA + ++ + + R+ Y P V + KNR
Sbjct: 158 PIHNDKFPSNWELSSARAANMIHHLIEVYNVDDKRLAAVGYADTKPVVPNDSPQNWEKNR 217
Query: 148 RAIVFLK 154
R ++++K
Sbjct: 218 RVVIYIK 224
>gi|227115434|ref|ZP_03829090.1| putative porin [Pectobacterium carotovorum subsp. brasiliensis
PBR1692]
Length = 505
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 53/141 (37%), Gaps = 2/141 (1%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+ I+ +N+ + + + + V DS FDT+S + ++ + +
Sbjct: 83 ALAKIAQEENIAMTTRALQSQEKSGTETVGLVAQVQDSGMFDTNSAQLSTDGLRQVKKIA 142
Query: 74 SWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
+ +++ D L+ GH D GS + L +RA V G+SA ++ G
Sbjct: 143 TAMKEGDQSGVILVVGHTDATGSAEWNQRLSEQRAQNVGRVLEQAGLSAQKLYFQGAGSA 202
Query: 132 MPSVYGHDEDAYAKNRRAIVF 152
P NRR +
Sbjct: 203 RPVADNATVTGRTANRRVEIV 223
>gi|326773950|ref|ZP_08233232.1| hypothetical protein HMPREF0059_02356 [Actinomyces viscosus C505]
gi|326636089|gb|EGE36993.1| hypothetical protein HMPREF0059_02356 [Actinomyces viscosus C505]
Length = 569
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 46/127 (36%), Gaps = 3/127 (2%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW--LEKHDCDFLI 85
+ D + + + + ++ V F + S + P L+ + S I
Sbjct: 250 TRALDDSTSTQAGGKDITVTLASDVTFASDSADLAPGAEAQLNTVASQLGQYPDGGTLTI 309
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYA 144
GH D++ + L +RA AV + V+ G+ P + ++A A
Sbjct: 310 VGHTDDVQDDAYNQTLSEKRANAVKTRLAQLTKLDKWQTSVSGKGESEPKIKDTTDEARA 369
Query: 145 KNRRAIV 151
NRR +
Sbjct: 370 ANRRVEI 376
>gi|121725841|ref|ZP_01679141.1| OmpA family protein [Vibrio cholerae V52]
gi|147672308|ref|YP_001215442.1| OmpA family protein [Vibrio cholerae O395]
gi|121631606|gb|EAX63974.1| OmpA family protein [Vibrio cholerae V52]
gi|146314691|gb|ABQ19231.1| OmpA family protein [Vibrio cholerae O395]
gi|227015278|gb|ACP11487.1| protein F-related protein [Vibrio cholerae O395]
Length = 207
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIA 100
+ + ++V F+T S + A Q L + +L D ++EGH D GS +
Sbjct: 90 DYPMIKLNNTVRFETGSAKVSMASKQWLDTVARFLATESGIDIVLEGHTDNTGSEKLNDK 149
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
L RRA AV V ++ + + +G+ +P+ ++ A NRR +
Sbjct: 150 LAERRANAVKAALVQSRVAQNAIYTRGFGENVPACTNSTKNGRACNRRVEI 200
>gi|118479664|ref|YP_896815.1| flagellar motor protein MotB [Bacillus thuringiensis str. Al Hakam]
gi|196044798|ref|ZP_03112032.1| chemotaxis protein MotB [Bacillus cereus 03BB108]
gi|118418889|gb|ABK87308.1| chemotaxis protein, MotB [Bacillus thuringiensis str. Al Hakam]
gi|196024286|gb|EDX62959.1| chemotaxis protein MotB [Bacillus cereus 03BB108]
Length = 262
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 45/128 (35%), Gaps = 6/128 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+ ++ ++ ++V FD+ ++ + + + S + + + GH D
Sbjct: 127 SSSFQTKLTEKGLMVTILENVLFDSGKADVKLESLGIAKEMSSLLVSASPREITVSGHTD 186
Query: 91 ELGSRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ N+ A R + + + + YG+ ++ AK
Sbjct: 187 NVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAIGYGEYRSIAPNDTQEGKAK 246
Query: 146 NRRAIVFL 153
NRR VF+
Sbjct: 247 NRRVEVFI 254
>gi|269963500|ref|ZP_06177826.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269831797|gb|EEZ85930.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 91
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 37/86 (43%)
Query: 75 WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
I G++D GS + L +RA AV ++F A GI+A RM V G+ P
Sbjct: 1 MNTYPQAQVEINGYSDTTGSEAYNQQLTEKRAQAVADHFQAEGIAADRMTVKGMGEANPV 60
Query: 135 VYGHDEDAYAKNRRAIVFLKGCRANT 160
+ +NRR V + + T
Sbjct: 61 ASNETREGREENRRVEVVVPAFQYQT 86
>gi|228926763|ref|ZP_04089831.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228832876|gb|EEM78445.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 227
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 53/127 (41%), Gaps = 5/127 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ +N S + D++ FDT +++P +++S L + + ++EGH D
Sbjct: 100 SQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKEIISQLVGFFQSVPNPIVVEGHTDSR 159
Query: 93 GSRNS----SIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
N + L RA + ++ + + R+ Y P V + KNR
Sbjct: 160 PIHNDKFPSNWELSSARAANMIHHLIEVYNVDDKRLAAVGYADTKPVVPNDSPQNWEKNR 219
Query: 148 RAIVFLK 154
R ++++K
Sbjct: 220 RVVIYIK 226
>gi|167741105|ref|ZP_02413879.1| hypothetical protein Bpse14_23766 [Burkholderia pseudomallei 14]
Length = 394
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 43/127 (33%), Gaps = 4/127 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
L+ + S + F + + PA ++ + + + K + G+ D
Sbjct: 266 AAGTLSVEENARRSSVTFRGDAMFAPGAAGVNPAMGPLIRKIAAEIAKVPGKVTVRGYTD 325
Query: 91 ELGSRNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
++ A L RA V + G+ ASR++ G P A N
Sbjct: 326 NQPIKSRQFASNEALSEERATQVMQMLQSAGVPASRLEALGKGGAEPIGDNRTPQGRALN 385
Query: 147 RRAIVFL 153
RR + +
Sbjct: 386 RRVEITV 392
>gi|47566111|ref|ZP_00237149.1| sodium-driven polar flagellar protein PomB, putative [Bacillus
cereus G9241]
gi|47557028|gb|EAL15358.1| sodium-driven polar flagellar protein PomB, putative [Bacillus
cereus G9241]
Length = 225
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 53/127 (41%), Gaps = 5/127 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ +N S + D++ FDT +++P +++S L + + ++EGH D
Sbjct: 98 SQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKEIISKLVGFFQSVPNPIVVEGHTDSR 157
Query: 93 GSRNS----SIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
N + L RA + ++ + + R+ Y P V + KNR
Sbjct: 158 PIHNEKFPSNWELSSARAANMIHHLIEVYNVEDKRLAAVGYADTKPVVPNDSPQNWEKNR 217
Query: 148 RAIVFLK 154
R ++++K
Sbjct: 218 RVVIYIK 224
>gi|319796166|ref|YP_004157806.1| ompa/motb domain protein [Variovorax paradoxus EPS]
gi|315598629|gb|ADU39695.1| OmpA/MotB domain protein [Variovorax paradoxus EPS]
Length = 273
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 1/106 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++ F+ S ++ +L + + + + GH D GSR S++AL RA
Sbjct: 165 NRTIEFELGSATLTRKGRDILDEMAPILQKLTNKSVAVIGHTDNAGSRASNLALSQSRAE 224
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV Y V +GI + + G + P ++ ++NRR +
Sbjct: 225 AVKGYLVGKGIDPMTLTTSGVGPDQPVANNATDEGRSRNRRIEFRV 270
>gi|167826676|ref|ZP_02458147.1| hypothetical protein Bpseu9_23575 [Burkholderia pseudomallei 9]
Length = 390
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 43/127 (33%), Gaps = 4/127 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
L+ + S + F + + PA ++ + + + K + G+ D
Sbjct: 262 AAGTLSVEENARRSSVTFRGDAMFAPGAAGVNPAMGPLIRKIAAEIAKVPGKVTVRGYTD 321
Query: 91 ELGSRNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
++ A L RA V + G+ ASR++ G P A N
Sbjct: 322 NQPIKSRQFASNEALSEERATQVMQMLQSAGVPASRLEALGKGGAEPIGDNRTPQGRALN 381
Query: 147 RRAIVFL 153
RR + +
Sbjct: 382 RRVEITV 388
>gi|65318994|ref|ZP_00391953.1| COG1360: Flagellar motor protein [Bacillus anthracis str. A2012]
gi|228933012|ref|ZP_04095875.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228826613|gb|EEM72384.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 227
Score = 71.0 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 53/127 (41%), Gaps = 5/127 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ +N S + D++ FDT +++P +++S L + + ++EGH D
Sbjct: 100 SQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKEIISQLVGFFQSVPNPIVVEGHTDSR 159
Query: 93 GSRNS----SIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
N + L RA + ++ + + R+ Y P V + KNR
Sbjct: 160 PIHNDKFPSNWELSSARAANMIHHLIEVYNVDDKRLAAVGYADTKPVVPNDSPQNWEKNR 219
Query: 148 RAIVFLK 154
R ++++K
Sbjct: 220 RVVIYIK 226
>gi|229513150|ref|ZP_04402615.1| protein F-related protein [Vibrio cholerae TMA 21]
gi|229349560|gb|EEO14515.1| protein F-related protein [Vibrio cholerae TMA 21]
Length = 204
Score = 71.0 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIA 100
+ + ++V F+T S + A Q L + +L D ++EGH D GS +
Sbjct: 87 DYPMIKLNNTVRFETGSAKVSMASKQWLDTVARFLATESGIDIVLEGHTDNTGSEKLNDK 146
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
L RRA AV V ++ + + +G+ +P+ ++ A NRR +
Sbjct: 147 LAERRANAVKAALVQSRVAQNAIYTRGFGENVPACTNSTKNGRACNRRVEI 197
>gi|152995997|ref|YP_001340832.1| OmpA/MotB domain-containing protein [Marinomonas sp. MWYL1]
gi|150836921|gb|ABR70897.1| OmpA/MotB domain protein [Marinomonas sp. MWYL1]
Length = 311
Score = 71.0 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 2/142 (1%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
M + N + +LN + ++GD F T ++P+ + L L +
Sbjct: 142 MEANAERNRSQEFQRQLGMLNAKATNRGMIMTLGDLSF-ATGKAKLQPSVLIDLDKLVVF 200
Query: 76 -LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
+ D +IEG+ D +GS ++ L RA AV +Y V +GI+++R+ V + G+ P
Sbjct: 201 LNKYADRSIVIEGNTDSVGSEALNLRLSQHRASAVRDYLVGKGINSARLTVVANGEGNPL 260
Query: 135 VYGHDEDAYAKNRRAIVFLKGC 156
+ NRR + +
Sbjct: 261 DTNDSKLGRQHNRRVDIVISNT 282
>gi|161520025|ref|YP_001583452.1| OmpA/MotB domain-containing protein [Burkholderia multivorans ATCC
17616]
gi|189353793|ref|YP_001949420.1| OmpA/MotB family outer membrane protein [Burkholderia multivorans
ATCC 17616]
gi|160344075|gb|ABX17160.1| OmpA/MotB domain protein [Burkholderia multivorans ATCC 17616]
gi|189337815|dbj|BAG46884.1| OmpA/MotB family outer membrane protein [Burkholderia multivorans
ATCC 17616]
Length = 220
Score = 71.0 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 1/110 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLR 104
S+ F + ++ PA L L + + G+ D +GS S++AL R
Sbjct: 110 VSLAGDALFASGLATLTPAARASLDKLLNAHADRSYTQVSVTGYTDSVGSDASNLALSKR 169
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RA AV Y RG++A + VT G P + A NRR + L+
Sbjct: 170 RAEAVAAYLQQRGLNARTLTVTGRGSADPIASNATAEGRATNRRVEISLQ 219
>gi|83716132|ref|YP_438328.1| hypothetical protein BTH_II0126 [Burkholderia thailandensis E264]
gi|167614770|ref|ZP_02383405.1| hypothetical protein BthaB_00705 [Burkholderia thailandensis Bt4]
gi|257141357|ref|ZP_05589619.1| hypothetical protein BthaA_19439 [Burkholderia thailandensis E264]
gi|83649957|gb|ABC34021.1| OmpA domain protein [Burkholderia thailandensis E264]
Length = 433
Score = 71.0 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 39/123 (31%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
L + F + + P VL + + + + GH+D
Sbjct: 309 LTVDEDDARSVVVFRGDSMFRSGESRVLPEIEPVLDKVAREVARVGGRVTVTGHSDNQPI 368
Query: 95 RNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
R + I L +RA V V RG A ++ G P ++NRR
Sbjct: 369 RRADIPNNLVLSEKRAAYVAQILVQRGTPADHIRSEGRGDAQPVAENTTPAGRSRNRRVE 428
Query: 151 VFL 153
+ +
Sbjct: 429 IAV 431
>gi|228974615|ref|ZP_04135181.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228981210|ref|ZP_04141510.1| OmpA/MotB domain protein [Bacillus thuringiensis Bt407]
gi|228778410|gb|EEM26677.1| OmpA/MotB domain protein [Bacillus thuringiensis Bt407]
gi|228785018|gb|EEM33031.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
thuringiensis str. T01001]
Length = 234
Score = 71.0 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 18/128 (14%), Positives = 45/128 (35%), Gaps = 6/128 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+ ++ ++ +++ FD+ ++ + + + S + + + GH D
Sbjct: 99 SSSFQTKLTEKGLMVTILENILFDSGKADVKLESLGIAKEMSSLLVSASPREITVSGHTD 158
Query: 91 ELGSRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ N+ A R + + + + YG+ ++ AK
Sbjct: 159 NVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAIGYGEYRSIAPNDTQEGKAK 218
Query: 146 NRRAIVFL 153
NRR VF+
Sbjct: 219 NRRVEVFI 226
>gi|254687000|ref|ZP_05150858.1| chemotaxis protein MotB [Bacillus anthracis str. CNEVA-9066]
gi|254724563|ref|ZP_05186346.1| chemotaxis protein MotB [Bacillus anthracis str. A1055]
gi|254754750|ref|ZP_05206785.1| chemotaxis protein MotB [Bacillus anthracis str. Vollum]
gi|254757582|ref|ZP_05209609.1| chemotaxis protein MotB [Bacillus anthracis str. Australia 94]
Length = 153
Score = 71.0 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 45/128 (35%), Gaps = 6/128 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+ ++ ++ ++V FD+ ++ + + + S + + + GH D
Sbjct: 18 SSSFQTKLTEKGLMVTILENVLFDSGKADVKLESLGIAKEMSSLLVSASPREITVSGHTD 77
Query: 91 ELGSRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ N+ A R + + + + YG+ ++ AK
Sbjct: 78 NVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAIGYGEYRSIAPNDTQEGKAK 137
Query: 146 NRRAIVFL 153
NRR VF+
Sbjct: 138 NRRVEVFI 145
>gi|229163499|ref|ZP_04291450.1| OmpA/MotB domain protein [Bacillus cereus R309803]
gi|228620068|gb|EEK76943.1| OmpA/MotB domain protein [Bacillus cereus R309803]
Length = 233
Score = 71.0 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 18/120 (15%), Positives = 44/120 (36%), Gaps = 6/120 (5%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSS 98
++ ++ ++V FD+ ++ + + + + + + + GH D + N+
Sbjct: 106 TEKGLKVTILENVLFDSGKADVKLESLNIAKEMSNLLVSTSPREITVSGHTDNVPIANAQ 165
Query: 99 IALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
A R + + + + YG+ ++ AKNRR VF+
Sbjct: 166 FASNWELSTQRAVNFMQVLLQNKELQPEKFSAVGYGEYRSIAPNDTQEGKAKNRRVEVFI 225
>gi|331648347|ref|ZP_08349435.1| YfiB [Escherichia coli M605]
gi|330912368|gb|EGH40878.1| integral membrane protein YfiB [Escherichia coli AA86]
gi|331042094|gb|EGI14236.1| YfiB [Escherichia coli M605]
Length = 160
Score = 70.6 bits (171), Expect = 6e-11, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 54/149 (36%), Gaps = 3/149 (2%)
Query: 8 IILSAITMMSISGIDNL-DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADI 66
+I +++ + + + + +S + D++ F + Y + P
Sbjct: 9 LIFTSLILTGCQSPQGKFTPEQVAAMQSYGFTESAGDWSLGLSDAILFAKNDYKLLPESQ 68
Query: 67 QVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMK 124
Q + + + L ++GH D G + + L L+RA V + + G +
Sbjct: 69 QQIQTMAAKLASTGLTHARMDGHTDNYGEDSYNEVLSLKRANVVADAWAMGGQIPRSNLI 128
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
GK+ P A+NRR V +
Sbjct: 129 TQGLGKKYPIASNKTAQGRAENRRVAVVI 157
>gi|229072015|ref|ZP_04205225.1| OmpA/MotB domain protein [Bacillus cereus F65185]
gi|229081763|ref|ZP_04214256.1| OmpA/MotB domain protein [Bacillus cereus Rock4-2]
gi|228701608|gb|EEL54101.1| OmpA/MotB domain protein [Bacillus cereus Rock4-2]
gi|228711174|gb|EEL63139.1| OmpA/MotB domain protein [Bacillus cereus F65185]
Length = 234
Score = 70.6 bits (171), Expect = 6e-11, Method: Composition-based stats.
Identities = 18/128 (14%), Positives = 45/128 (35%), Gaps = 6/128 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+ ++ ++ +++ FD+ ++ + + + S + + + GH D
Sbjct: 99 SSSFQTKLTEKGLMVTILENILFDSGKADVKLESLGIAKEMSSLLVSASPREITVSGHTD 158
Query: 91 ELGSRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ N+ A R + + + + YG+ ++ AK
Sbjct: 159 NVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAIGYGEYRSIAPNDTQEGKAK 218
Query: 146 NRRAIVFL 153
NRR VF+
Sbjct: 219 NRRVEVFI 226
>gi|221200257|ref|ZP_03573299.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M]
gi|221205937|ref|ZP_03578951.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2]
gi|221173949|gb|EEE06382.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2]
gi|221179598|gb|EEE12003.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M]
Length = 220
Score = 70.6 bits (171), Expect = 6e-11, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLR 104
S+ F + ++ PA L L + ++ + G+ D +GS S++AL R
Sbjct: 110 VSLSGDALFASGLATLTPAARASLDKLLNAYGDRSYTQVSVTGYTDSVGSDASNLALSKR 169
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RA AV Y RG+ A + VT G P + A NRR + L+
Sbjct: 170 RAEAVAAYLQQRGLQARSLTVTGRGSADPIASNATAEGRATNRRVEISLQ 219
>gi|157889026|dbj|BAF80970.1| fibronectin-binding protein [Campylobacter lari]
Length = 328
Score = 70.6 bits (171), Expect = 6e-11, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 1/107 (0%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGL 103
++ F I P Q + +G LE++ + I EGH D +G + + L L
Sbjct: 215 EKTIALEGHFGFDQTDINPEFAQKIQEVGKVLEENPQYYTILEGHTDNIGPKAYNQKLSL 274
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
RA V G++ ++ YG + P ++ A+NRR
Sbjct: 275 ERAKVVAKELEKTGVTKEKIATKGYGFDKPKASNDTKEGRAQNRRVE 321
>gi|124005444|ref|ZP_01690285.1| OmpA family protein [Microscilla marina ATCC 23134]
gi|123989266|gb|EAY28844.1| OmpA family protein [Microscilla marina ATCC 23134]
Length = 300
Score = 70.6 bits (171), Expect = 6e-11, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 49/115 (42%), Gaps = 2/115 (1%)
Query: 45 SSSVGDSVFFDTSSYSIR--PADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALG 102
+ V V+F++ S + ++ +++ + + I GH D G +++ +
Sbjct: 186 AQFVLHEVYFESGSTELHDARSEEELMRLVSFLKKHPKLKGEIAGHTDNTGRAAANLQIS 245
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
+RAY+V+ Y G+ +++ YG P ++ KNRR + R
Sbjct: 246 TQRAYSVYKYLTKNGVKPAQLIYRGYGATRPKFPNNNPVNRRKNRRIEFKILKVR 300
>gi|254294751|ref|YP_003060774.1| peptidoglycan-associated lipoprotein [Hirschia baltica ATCC 49814]
gi|254043282|gb|ACT60077.1| peptidoglycan-associated lipoprotein [Hirschia baltica ATCC 49814]
Length = 181
Score = 70.6 bits (171), Expect = 6e-11, Method: Composition-based stats.
Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 22/169 (13%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNE---------------------SS 39
M Y F L+ SG + + + T
Sbjct: 1 MNYKVSFAALTFSAAALASGCASTVEEPAPVPTPTPVATPAPVPTPTPTPVVVPQGPIPG 60
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSS 98
E F+ +VG +F+D YS+ AD QVL+ +WL + LI G+ DE G+R +
Sbjct: 61 SLEDFNVNVGSKIFYDVDQYSLDDADRQVLARQAAWLNTYPGVSILIAGNCDERGTREYN 120
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
IALG RRA A +Y + G+SA+R++ SYGKE P+ +A++ NR
Sbjct: 121 IALGERRAAAAKDYLMGLGVSAARIETVSYGKERPTDPRSTTEAWSVNR 169
>gi|229141242|ref|ZP_04269781.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST26]
gi|229198660|ref|ZP_04325361.1| OmpA/MotB domain protein [Bacillus cereus m1293]
gi|228584819|gb|EEK42936.1| OmpA/MotB domain protein [Bacillus cereus m1293]
gi|228642283|gb|EEK98575.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST26]
Length = 233
Score = 70.6 bits (171), Expect = 6e-11, Method: Composition-based stats.
Identities = 18/120 (15%), Positives = 44/120 (36%), Gaps = 6/120 (5%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSS 98
++ ++ ++V FD+ ++ + + + + + + + GH D + N+
Sbjct: 106 TEKGLKVTILENVLFDSGKADVKLESLSIAKEMSNLLVSASPREITVSGHTDNVPIANAQ 165
Query: 99 IALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
A R + + + + YG+ ++ AKNRR VF+
Sbjct: 166 FASNWELSTQRAVNFMQVLLQNKELQPGKFSAVGYGEYRSIAPNDTQEGKAKNRRVEVFI 225
>gi|228923254|ref|ZP_04086544.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228954780|ref|ZP_04116801.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228960776|ref|ZP_04122414.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|229048216|ref|ZP_04193785.1| OmpA/MotB domain protein [Bacillus cereus AH676]
gi|229111973|ref|ZP_04241517.1| OmpA/MotB domain protein [Bacillus cereus Rock1-15]
gi|229129795|ref|ZP_04258762.1| OmpA/MotB domain protein [Bacillus cereus BDRD-Cer4]
gi|229147069|ref|ZP_04275429.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST24]
gi|229152704|ref|ZP_04280891.1| OmpA/MotB domain protein [Bacillus cereus m1550]
gi|229180776|ref|ZP_04308114.1| OmpA/MotB domain protein [Bacillus cereus 172560W]
gi|229192709|ref|ZP_04319668.1| OmpA/MotB domain protein [Bacillus cereus ATCC 10876]
gi|228590799|gb|EEK48659.1| OmpA/MotB domain protein [Bacillus cereus ATCC 10876]
gi|228602754|gb|EEK60237.1| OmpA/MotB domain protein [Bacillus cereus 172560W]
gi|228630767|gb|EEK87409.1| OmpA/MotB domain protein [Bacillus cereus m1550]
gi|228636457|gb|EEK92927.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST24]
gi|228653711|gb|EEL09582.1| OmpA/MotB domain protein [Bacillus cereus BDRD-Cer4]
gi|228671537|gb|EEL26837.1| OmpA/MotB domain protein [Bacillus cereus Rock1-15]
gi|228723203|gb|EEL74579.1| OmpA/MotB domain protein [Bacillus cereus AH676]
gi|228798911|gb|EEM45887.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228804900|gb|EEM51498.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228836460|gb|EEM81811.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 234
Score = 70.6 bits (171), Expect = 6e-11, Method: Composition-based stats.
Identities = 18/128 (14%), Positives = 45/128 (35%), Gaps = 6/128 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+ ++ ++ +++ FD+ ++ + + + S + + + GH D
Sbjct: 99 SSSFQTKLTEKGLMVTILENILFDSGKADVKLESLGIAKEMSSLLVSASPREITVSGHTD 158
Query: 91 ELGSRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ N+ A R + + + + YG+ ++ AK
Sbjct: 159 NVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAIGYGEYRSIAPNDTQEGKAK 218
Query: 146 NRRAIVFL 153
NRR VF+
Sbjct: 219 NRRVEVFI 226
>gi|37676652|ref|NP_937048.1| hypothetical protein VVA0992 [Vibrio vulnificus YJ016]
gi|37201195|dbj|BAC97018.1| uncharacterized protein conserved in bacteria [Vibrio vulnificus
YJ016]
Length = 442
Score = 70.6 bits (171), Expect = 6e-11, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 54/143 (37%), Gaps = 4/143 (2%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL 72
I+ ++++ +L +L ++ + + F++ S + V+S +
Sbjct: 283 ISSLAVANQIQRSLATEIEMGLLKVDALPDRVRITFQSNDLFESGSAELVAHIFPVVSKV 342
Query: 73 GSWLEKHDCDFLIEGHADELGSR----NSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
LE + L+ GH D S+ L L RA A+ + + G + R+
Sbjct: 343 ARALEATNGKILVVGHTDNNPIFTSKFPSNWHLSLARATALTDRLASAGKLSGRVIPEGM 402
Query: 129 GKEMPSVYGHDEDAYAKNRRAIV 151
G P V + + NRR +
Sbjct: 403 GDARPLVSNETVEGRSINRRVEI 425
>gi|296332050|ref|ZP_06874514.1| flagellar motor protein MotS [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305675555|ref|YP_003867227.1| putative flagellar motor apparatus component [Bacillus subtilis
subsp. spizizenii str. W23]
gi|296150821|gb|EFG91706.1| flagellar motor protein MotS [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305413799|gb|ADM38918.1| putative flagellar motor apparatus component [Bacillus subtilis
subsp. spizizenii str. W23]
Length = 236
Score = 70.6 bits (171), Expect = 6e-11, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 42/127 (33%), Gaps = 5/127 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ + + ++V FD+ + +L + L+ D +EGH D
Sbjct: 109 AQMTAKRDERGVVLVLQEAVLFDSGEAKVLKNAETLLHQIAVLLQTIPNDIQVEGHTDSR 168
Query: 93 GS----RNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNR 147
S+ L RA V YF ++ R Y P + +NR
Sbjct: 169 NISTYRYPSNWELSAARASGVIQYFTSKEKLPSKRFIAVGYADTKPVKDNKTNEHMKENR 228
Query: 148 RAIVFLK 154
R + +K
Sbjct: 229 RVEIVIK 235
>gi|288801213|ref|ZP_06406668.1| lipoprotein PG3 [Prevotella sp. oral taxon 299 str. F0039]
gi|288331824|gb|EFC70307.1| lipoprotein PG3 [Prevotella sp. oral taxon 299 str. F0039]
Length = 225
Score = 70.6 bits (171), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 3/143 (2%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-L 76
++ K + + V + + L+ + + F T+ + L+ +
Sbjct: 73 VAQETAAKVKSAKIEEVTDANGLKA-VKVTFDSGILFSTNKAVLSQTSKNDLAKFATILK 131
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSV 135
E DC I GH D G+ +I L RA +V NY + G++ S+ K V G P
Sbjct: 132 ENRDCHVDIYGHTDSTGNDGINIPLSNSRARSVVNYLESCGVTGSQFKNVQGKGSSEPVA 191
Query: 136 YGHDEDAYAKNRRAIVFLKGCRA 158
+NRR V+L +A
Sbjct: 192 SNSTASGRQQNRRVEVYLYASQA 214
>gi|62185545|ref|YP_220330.1| putative peptidoglycan-associated protein (periplasmic)
[Chlamydophila abortus S26/3]
gi|62148612|emb|CAH64384.1| putative peptidoglycan-associated protein (periplasmic)
[Chlamydophila abortus S26/3]
Length = 191
Score = 70.6 bits (171), Expect = 6e-11, Method: Composition-based stats.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Query: 50 DSVFFDTSSYSIRPADIQVLSN--LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++ F T SY+I+ + + + + + IEGH DE G+ ++ALG RRA
Sbjct: 83 RNITFATDSYTIKGEENLAILSSLVRQMQKSPKATLYIEGHTDERGAAAYNLALGARRAN 142
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV + + +GISA R+ SYGKE P GH+E A+ +NRR +
Sbjct: 143 AVKQHLIKQGISADRLFTVSYGKEQPINSGHNELAWQQNRRTEFKI 188
>gi|228903029|ref|ZP_04067168.1| OmpA/MotB domain protein [Bacillus thuringiensis IBL 4222]
gi|228967605|ref|ZP_04128628.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228792096|gb|EEM39675.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228856622|gb|EEN01143.1| OmpA/MotB domain protein [Bacillus thuringiensis IBL 4222]
Length = 234
Score = 70.6 bits (171), Expect = 6e-11, Method: Composition-based stats.
Identities = 18/128 (14%), Positives = 45/128 (35%), Gaps = 6/128 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+ ++ ++ +++ FD+ ++ + + + S + + + GH D
Sbjct: 99 SSSFQTKLTEKGLMVTILENILFDSGKADVKLESLGIAKEMSSLLVSASPREITVSGHTD 158
Query: 91 ELGSRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ N+ A R + + + + YG+ ++ AK
Sbjct: 159 NVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAIGYGEYRSIAPNDTQEGKAK 218
Query: 146 NRRAIVFL 153
NRR VF+
Sbjct: 219 NRRVEVFI 226
>gi|256823714|ref|YP_003147677.1| type IV / VI secretion system protein, DotU family [Kangiella
koreensis DSM 16069]
gi|256797253|gb|ACV27909.1| type IV / VI secretion system protein, DotU family [Kangiella
koreensis DSM 16069]
Length = 439
Score = 70.6 bits (171), Expect = 6e-11, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 43/123 (34%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
L + + + + + ++S + I ++ +G + GH+D+
Sbjct: 300 LQVVEDIDHVAIIITSNQMYSSASAQLNENSIALIEKIGQIATTTPGHIQVVGHSDDQKI 359
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
+S+ L L RA +V A R+ G P V + A NRR
Sbjct: 360 FTAKYHSNWELSLARANSVVRILNQNQNLAGRVTAEGRGAAEPRVANDTDTNRALNRRVE 419
Query: 151 VFL 153
+ L
Sbjct: 420 ILL 422
>gi|71909661|ref|YP_287248.1| OmpA/MotB [Dechloromonas aromatica RCB]
gi|71849282|gb|AAZ48778.1| OmpA/MotB [Dechloromonas aromatica RCB]
Length = 180
Score = 70.6 bits (171), Expect = 6e-11, Method: Composition-based stats.
Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 1/143 (0%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW- 75
S SG D L + S S++FD Y ++ +++ +
Sbjct: 34 SGSGSGVAPVTAGGLDASGLPRELTDPKSKLSQRSIYFDLDKYEVKDEYKDLVAAHAKYL 93
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+ L++G+ DE GSR +++LG +RA AV G+ +++ S G+E P
Sbjct: 94 VANKGFKVLLQGNTDERGSREYNLSLGQKRAEAVKRSLTLLGVKDDQIESVSLGEEKPKD 153
Query: 136 YGHDEDAYAKNRRAIVFLKGCRA 158
GHDE A+++NRRA + K
Sbjct: 154 AGHDEAAWSQNRRADILYKAADG 176
>gi|114320567|ref|YP_742250.1| OmpA/MotB domain-containing protein [Alkalilimnicola ehrlichii
MLHE-1]
gi|114226961|gb|ABI56760.1| OmpA/MotB domain protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 326
Score = 70.6 bits (171), Expect = 6e-11, Method: Composition-based stats.
Identities = 35/160 (21%), Positives = 62/160 (38%), Gaps = 17/160 (10%)
Query: 9 ILSAITMMSISGID--NLDTKISSPDTVLN------------ESSLQEQFSSSVGDSVFF 54
+L+AI + + G+D + I + + + E+ L E ++ + + F
Sbjct: 164 VLAAIAIYNARGVDGPAVSKAIVTAEEMATAMEHKPLTAGEMETGLVEDGRVAIQN-ILF 222
Query: 55 DTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYF 113
+S I P L + E+ D L+ GH D G + ++ L + RA AV +
Sbjct: 223 AVNSAEILPDSADALEAIAELMSEQPDLTLLVVGHTDSTGDYDYNLTLSMERAEAVVRWL 282
Query: 114 VARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
I R++ G P E A+NRR +
Sbjct: 283 QREHGIDGDRLQAAGAGMMAPVTSNRTEAGRAENRRVELV 322
>gi|149910558|ref|ZP_01899197.1| putative peptidoglycan-associated lipoprotein [Moritella sp. PE36]
gi|149806401|gb|EDM66374.1| putative peptidoglycan-associated lipoprotein [Moritella sp. PE36]
Length = 196
Score = 70.6 bits (171), Expect = 6e-11, Method: Composition-based stats.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 7/143 (4%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD------SVFFDTSSYSIRPADIQVLS 70
+ SG + + + E+ E+ V D V+F ++ ++L
Sbjct: 53 TGSGSNVIVGSGTDVSIDSVENLTVEEVKKQVMDELRKRHVVYFGFDQQAVTAEYGELLQ 112
Query: 71 NLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
+ ++ ++ LIEGHADE G+ +IALG RRA AV Y G+S+S++ SYG
Sbjct: 113 DHANFLIDNPAVKVLIEGHADERGTPGYNIALGERRANAVVKYLNNLGVSSSQISTVSYG 172
Query: 130 KEMPSVYGHDEDAYAKNRRAIVF 152
+E P H + A+ +NRRA++
Sbjct: 173 EEKPVNTSHTDAAFTQNRRAVLV 195
>gi|145298724|ref|YP_001141565.1| flagellar motor protein MotB [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142851496|gb|ABO89817.1| Flagellar motor component MotB [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 292
Score = 70.6 bits (171), Expect = 6e-11, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 44/129 (34%), Gaps = 5/129 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
L L Q +G+ F S ++P I ++ + L ++ GH D +
Sbjct: 154 LEVEQLGSQLVIRIGEKALFPADSAFLQPQFIPLVHKIAGILANIPGKVVVTGHTDNSQA 213
Query: 95 ----RNSSIALGLRRAYA-VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
S+ L + RA + V + A+R+ P + NRR
Sbjct: 214 PLELYRSNWELSVLRAASIVHIMLTDPKLDATRVIAQGVADAQPRYPNDTAEHRQANRRV 273
Query: 150 IVFLKGCRA 158
+ L +A
Sbjct: 274 EITLSQGKA 282
>gi|229029408|ref|ZP_04185491.1| OmpA/MotB domain protein [Bacillus cereus AH1271]
gi|228731867|gb|EEL82766.1| OmpA/MotB domain protein [Bacillus cereus AH1271]
Length = 227
Score = 70.6 bits (171), Expect = 6e-11, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 53/127 (41%), Gaps = 5/127 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ +N S + D++ FDT +++P +++S L + + ++EGH D
Sbjct: 100 SQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKEIISQLVGFFQSVPNPIVVEGHTDSR 159
Query: 93 GSRNS----SIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
N + L RA + ++ + + R+ Y P V + KNR
Sbjct: 160 PIHNEKFPSNWELSSARAANMIHHLIEVYNVEDKRLAAVGYADTKPVVPNDSPQNWEKNR 219
Query: 148 RAIVFLK 154
R ++++K
Sbjct: 220 RVVIYIK 226
>gi|254452426|ref|ZP_05065863.1| OmpA domain protein [Octadecabacter antarcticus 238]
gi|198266832|gb|EDY91102.1| OmpA domain protein [Octadecabacter antarcticus 238]
Length = 612
Score = 70.6 bits (171), Expect = 6e-11, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 48/124 (38%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHA 89
E L + + + + F+ SS I A +L ++ L++ D I G+
Sbjct: 447 AALPTTEECLDQIMNVTESRKITFEPSSARIAGAGAAILDDITEILQRCADLRIEIAGYT 506
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GS + + L +RA AV + R + + + YG+ P D NRR
Sbjct: 507 DSQGSEDGNQRLSQQRADAVLDGLRVRRVPVASFRSVGYGEADPIADNETADGREANRRI 566
Query: 150 IVFL 153
L
Sbjct: 567 EFSL 570
>gi|229096214|ref|ZP_04227187.1| OmpA/MotB domain protein [Bacillus cereus Rock3-29]
gi|229102326|ref|ZP_04233035.1| OmpA/MotB domain protein [Bacillus cereus Rock3-28]
gi|229115169|ref|ZP_04244579.1| OmpA/MotB domain protein [Bacillus cereus Rock1-3]
gi|228668309|gb|EEL23741.1| OmpA/MotB domain protein [Bacillus cereus Rock1-3]
gi|228681227|gb|EEL35395.1| OmpA/MotB domain protein [Bacillus cereus Rock3-28]
gi|228687174|gb|EEL41079.1| OmpA/MotB domain protein [Bacillus cereus Rock3-29]
Length = 213
Score = 70.6 bits (171), Expect = 6e-11, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 53/127 (41%), Gaps = 5/127 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ +N S + D++ FDT +++P +++S L + + ++EGH D
Sbjct: 86 SQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKEIMSQLVGFFQSVPNPIVVEGHTDSR 145
Query: 93 GSRNS----SIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
N + L RA + ++ + + R+ Y P V + KNR
Sbjct: 146 PIHNEKFPSNWELSSARAANMIHHLIEVYNVDDKRLAAVGYADTKPVVPNDSPQNWEKNR 205
Query: 148 RAIVFLK 154
R ++++K
Sbjct: 206 RVVIYIK 212
>gi|300310091|ref|YP_003774183.1| outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Herbaspirillum seropedicae SmR1]
gi|300072876|gb|ADJ62275.1| outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Herbaspirillum seropedicae SmR1]
Length = 271
Score = 70.6 bits (171), Expect = 6e-11, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 60/137 (43%), Gaps = 3/137 (2%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL- 76
S +++ T + +E L + ++ V F++ ++ P ++L + + +
Sbjct: 135 ASSLNSSYTVNNGLRVSTSEQGLLD--NALANRVVSFESGQATLTPEGKRILDEIAATML 192
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ I G+ D G R S+I+L L RA AV Y A+G+ S + + G + P
Sbjct: 193 KLKGRHVEIIGNTDNEGLRASNISLSLARADAVKAYLGAKGVDESLLSTSGQGPDRPVAS 252
Query: 137 GHDEDAYAKNRRAIVFL 153
+ AKNRR +
Sbjct: 253 NATAEGRAKNRRIEFRI 269
>gi|319424730|gb|ADV52804.1| OmpA/MotB domain protein [Shewanella putrefaciens 200]
Length = 480
Score = 70.6 bits (171), Expect = 6e-11, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 50/122 (40%), Gaps = 2/122 (1%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRN 96
+ Q + + + FD S + P VL L ++L+++ F + GH D+ G R+
Sbjct: 358 TDAISQTGKATLEGLLFDYDSERMLPESKPVLEVLATYLKQNPALSFYVVGHTDDKGERS 417
Query: 97 SSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+ +L RRA AV ++ G+ P ++ NRR + L+
Sbjct: 418 YNQSLSERRAAAVIKQLNEAFNIPSVQLTAHGNGEYSPVASNANDTGQRLNRRVELVLRS 477
Query: 156 CR 157
+
Sbjct: 478 DK 479
>gi|118477164|ref|YP_894315.1| flagellar motor protein MotS [Bacillus thuringiensis str. Al Hakam]
gi|228945331|ref|ZP_04107686.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|229183920|ref|ZP_04311136.1| OmpA/MotB domain protein [Bacillus cereus BGSC 6E1]
gi|301053265|ref|YP_003791476.1| flagellar motor protein [Bacillus anthracis CI]
gi|118416389|gb|ABK84808.1| chemotaxis protein, MotB [Bacillus thuringiensis str. Al Hakam]
gi|228599572|gb|EEK57176.1| OmpA/MotB domain protein [Bacillus cereus BGSC 6E1]
gi|228814303|gb|EEM60569.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|300375434|gb|ADK04338.1| flagellar motor protein [Bacillus cereus biovar anthracis str. CI]
Length = 227
Score = 70.6 bits (171), Expect = 6e-11, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 53/127 (41%), Gaps = 5/127 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ +N S + D++ FDT +++P +++S L + + ++EGH D
Sbjct: 100 SQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKEIISQLVGFFQSVPNPIVVEGHTDSR 159
Query: 93 GSRNS----SIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
N + L RA + ++ + + R+ Y P V + KNR
Sbjct: 160 PIHNDKFPSNWELSSARAANMIHHLIEVYNVDDKRLAAVGYADTKPVVPNDSPQNWEKNR 219
Query: 148 RAIVFLK 154
R ++++K
Sbjct: 220 RVVIYIK 226
>gi|84515731|ref|ZP_01003092.1| OmpA/MotB family protein [Loktanella vestfoldensis SKA53]
gi|84510173|gb|EAQ06629.1| OmpA/MotB family protein [Loktanella vestfoldensis SKA53]
Length = 307
Score = 70.6 bits (171), Expect = 6e-11, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 45/141 (31%), Gaps = 6/141 (4%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPA-----DIQVLSNLG 73
+G+D ++ V + Q +G ++ D +
Sbjct: 163 TGLDMQPLATATAAPVGQANGSLAQQLDDLGHAILRDLDFTIGSAQLSEAAFASLAELAA 222
Query: 74 SWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEM 132
D + GH D G+ + +IAL RRA AV + V R R + G
Sbjct: 223 YLAAYPDRSVALVGHTDSAGALDINIALSQRRARAVLDRLVTRHGVNRRQLAAEGMGYLA 282
Query: 133 PSVYGHDEDAYAKNRRAIVFL 153
P E NRR V +
Sbjct: 283 PIASNQTETGRDANRRVEVIV 303
>gi|288801555|ref|ZP_06406997.1| OmpA family protein [Prevotella melaninogenica D18]
gi|302345028|ref|YP_003813381.1| OmpA family protein [Prevotella melaninogenica ATCC 25845]
gi|288335597|gb|EFC74030.1| OmpA family protein [Prevotella melaninogenica D18]
gi|302149794|gb|ADK96056.1| OmpA family protein [Prevotella melaninogenica ATCC 25845]
Length = 286
Score = 70.6 bits (171), Expect = 6e-11, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 45/119 (37%), Gaps = 11/119 (9%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC----------DFLIEGHADELGSR 95
S+ D++ + + SY + Q LS + + + + I D++ +
Sbjct: 147 ISLADNMLYKSGSYEVNDRAEQTLSKIAKIITDYKDYDVLIEGNTDNVPINTTTDKMKNI 206
Query: 96 NSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L RA +V Y R ++ R+ G+ P E +NRR + +
Sbjct: 207 RNNWDLSCLRAASVAQYLQDRFGVNPKRLTAGGRGEYNPLATNDTELGKQRNRRTQIII 265
>gi|194365634|ref|YP_002028244.1| flagellar motor protein MotD [Stenotrophomonas maltophilia R551-3]
gi|194348438|gb|ACF51561.1| OmpA/MotB domain protein [Stenotrophomonas maltophilia R551-3]
Length = 338
Score = 70.6 bits (171), Expect = 6e-11, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 55/143 (38%), Gaps = 4/143 (2%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
+ SI+ +++ + + + F T S ++ Q L++L
Sbjct: 130 LSSIADRLTAALAPLIDRGMISVRRTELWIEVEINSDILFPTGSAALDVHARQTLASLAE 189
Query: 75 WLEKHDCDFLIEGHADELG----SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
L +EGH D + + S+ L RA +V + F +G+ SR+ + YG+
Sbjct: 190 VLRDVPNSVRVEGHTDNVPIATATFPSNWELSAGRAASVVHLFADQGVQPSRLAMVGYGQ 249
Query: 131 EMPSVYGHDEDAYAKNRRAIVFL 153
P +NRR +V +
Sbjct: 250 FRPREENDSAQGRNRNRRVMVII 272
>gi|146291559|ref|YP_001181983.1| OmpA/MotB domain-containing protein [Shewanella putrefaciens CN-32]
gi|145563249|gb|ABP74184.1| OmpA/MotB domain protein [Shewanella putrefaciens CN-32]
Length = 481
Score = 70.6 bits (171), Expect = 6e-11, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 50/122 (40%), Gaps = 2/122 (1%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRN 96
+ Q + + + FD S + P VL L ++L+++ F + GH D+ G R+
Sbjct: 359 TDAISQTGKATLEGLLFDYDSERMLPESKPVLEVLATYLKQNPALSFYVVGHTDDKGERS 418
Query: 97 SSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+ +L RRA AV ++ G+ P ++ NRR + L+
Sbjct: 419 YNQSLSERRAAAVIKQLNEAFNIPSVQLTAHGNGEYSPVASNANDTGQRLNRRVELVLRS 478
Query: 156 CR 157
+
Sbjct: 479 DK 480
>gi|167908679|ref|ZP_02495884.1| hypothetical protein BpseN_41039 [Burkholderia pseudomallei NCTC
13177]
Length = 395
Score = 70.6 bits (171), Expect = 6e-11, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 43/127 (33%), Gaps = 4/127 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
L+ + S + F + + PA ++ + + + K + G+ D
Sbjct: 267 AAGTLSVEENARRSSVTFRGDAMFAPGAAGVNPAMGPLIRKIAAEIAKVPGKVTVRGYTD 326
Query: 91 ELGSRNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
++ A L RA V + G+ ASR++ G P A N
Sbjct: 327 NQPIKSRQFASNEALSEERATQVMQMLQSAGVPASRLEALGKGGAEPIGDNRTPQGRALN 386
Query: 147 RRAIVFL 153
RR + +
Sbjct: 387 RRVEITV 393
>gi|91783726|ref|YP_558932.1| hypothetical protein Bxe_A2088 [Burkholderia xenovorans LB400]
gi|91687680|gb|ABE30880.1| outer membrane protein, OmpA/MotB family [Burkholderia xenovorans
LB400]
Length = 443
Score = 70.6 bits (171), Expect = 6e-11, Method: Composition-based stats.
Identities = 18/127 (14%), Positives = 43/127 (33%), Gaps = 4/127 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
++ S + F + +++ + +++ + + K + G+ D
Sbjct: 315 AAGTVSVDEDAHHSSVTFRGDSMFPPGAAAVKTSMTPLITKIAGEIAKVPGKVTVLGYTD 374
Query: 91 ELGSRNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ ++ A L RA + G+ A R++ G P A+N
Sbjct: 375 NVPIKSRQFASNAALSEERATQIMQMLQTAGVPAVRLEAVGRGDADPIGDNTTVQGRAQN 434
Query: 147 RRAIVFL 153
RR + +
Sbjct: 435 RRVEITV 441
>gi|150390475|ref|YP_001320524.1| OmpA/MotB domain-containing protein [Alkaliphilus metalliredigens
QYMF]
gi|149950337|gb|ABR48865.1| OmpA/MotB domain protein [Alkaliphilus metalliredigens QYMF]
Length = 243
Score = 70.6 bits (171), Expect = 6e-11, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 46/121 (38%), Gaps = 9/121 (7%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDCDFLIEGHADELG----- 93
D++ FD+ ++ +++L +L + E + +EGH D
Sbjct: 113 RGLILRFHDNILFDSGRAELKSRPMEILKDLAGFLDGEEFQNKHIRVEGHTDTDPLRVTS 172
Query: 94 SRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
++ L + RA V + + G++ R YG+ P + A NRR V
Sbjct: 173 KYETNWELSVARASNVVRFLIEDAGVTPERFSAAGYGEYRPLAANDTIENKAINRRVDVV 232
Query: 153 L 153
+
Sbjct: 233 I 233
>gi|206970743|ref|ZP_03231695.1| putative chemotaxis protein MotB [Bacillus cereus AH1134]
gi|218233445|ref|YP_002366413.1| flagellar motor protein MotS [Bacillus cereus B4264]
gi|218896660|ref|YP_002445071.1| putative chemotaxis protein MotB [Bacillus cereus G9842]
gi|296502310|ref|YP_003664010.1| flagellar motor protein MotS [Bacillus thuringiensis BMB171]
gi|206734379|gb|EDZ51549.1| putative chemotaxis protein MotB [Bacillus cereus AH1134]
gi|218161402|gb|ACK61394.1| putative chemotaxis protein MotB [Bacillus cereus B4264]
gi|218544664|gb|ACK97058.1| putative chemotaxis protein MotB [Bacillus cereus G9842]
gi|296323362|gb|ADH06290.1| flagellar motor protein MotS [Bacillus thuringiensis BMB171]
Length = 225
Score = 70.6 bits (171), Expect = 6e-11, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 52/127 (40%), Gaps = 5/127 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ +N S + D++ FDT +++P ++S L + + ++EGH D
Sbjct: 98 SQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKGIISQLVGFFQSVPNPIVVEGHTDSR 157
Query: 93 GSRNS----SIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
N + L RA + ++ + + R+ Y P V + KNR
Sbjct: 158 PIHNEKFPSNWELSSARAANMIHHLIEVYNVDDKRLAAVGYADTKPIVPNDSPQNWEKNR 217
Query: 148 RAIVFLK 154
R ++++K
Sbjct: 218 RVVIYIK 224
>gi|149911588|ref|ZP_01900201.1| outer membrane protein OmpA [Moritella sp. PE36]
gi|149805367|gb|EDM65379.1| outer membrane protein OmpA [Moritella sp. PE36]
Length = 303
Score = 70.6 bits (171), Expect = 6e-11, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 43/122 (35%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
P + + +++ + F +S I + + + I + D
Sbjct: 173 PAPKVVPPAEPVIVPTTLNSNTLFKFNSAEISDSSALAKLAKKMSASHVEINVEIVAYTD 232
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G ++ L +RA AV +YF+ +G++ + G+ P KNRR
Sbjct: 233 TSGPEAYNLKLSKKRAEAVRDYFIKQGVNKQVINTAWKGEANPIASNKTRAGRIKNRRVD 292
Query: 151 VF 152
+
Sbjct: 293 II 294
>gi|297183997|gb|ADI20117.1| outer membrane protein and related peptidoglycan-associated
(lipo)proteins [uncultured alpha proteobacterium
EB080_L06A09]
Length = 613
Score = 70.6 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 42/115 (36%), Gaps = 3/115 (2%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAY 107
+ F+ + + V+ + L F I+GH D GS + L RA
Sbjct: 498 NTKIRFEPGKVVLNDDNFTVIKLIADVLRTCPEAKFEIQGHTDSSGSEELNQNLSQSRAE 557
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL--KGCRANT 160
AV + R + S + YG P E+ NRR + L + + N+
Sbjct: 558 AVLFELLNRRVLTSGISAKGYGSISPIADNKTEEGREINRRIEIKLVEETTKTNS 612
>gi|162456876|ref|YP_001619243.1| hypothetical protein sce8593 [Sorangium cellulosum 'So ce 56']
gi|161167458|emb|CAN98763.1| probable outer membrane protein [Sorangium cellulosum 'So ce 56']
Length = 210
Score = 70.6 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 48/131 (36%), Gaps = 10/131 (7%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS----WLEKHDCDFLIE 86
+ + + S+ F+ +S ++PA I +L L +LE HD ++
Sbjct: 71 AGPLAEGRITLTEGRIGIRGSILFELNSAELQPAGIALLRALADPLKAYLEHHDELIMVS 130
Query: 87 GHAD------ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
G D + L +RA V A G+ + + +G+ P
Sbjct: 131 GFTDDRPLTSSSRGYADNWELSAQRALTVTRALAAAGVPDTSLFAAGFGERHPVAPNDTS 190
Query: 141 DAYAKNRRAIV 151
+ AKNRR +
Sbjct: 191 ENRAKNRRVEI 201
>gi|253698707|ref|YP_003019896.1| OmpA/MotB domain protein [Geobacter sp. M21]
gi|251773557|gb|ACT16138.1| OmpA/MotB domain protein [Geobacter sp. M21]
Length = 333
Score = 70.6 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 55/141 (39%), Gaps = 2/141 (1%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
T + + +++P + + +V FDT+ I+P L
Sbjct: 187 VCTGPGGAARSDAKVAVTAPPVPVPAVVQPAKLCQPAVINVQFDTNKSDIKPQYHDELKA 246
Query: 72 LGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYG 129
L +L++ IEGH D +G + +++ L RRA +V Y V R R+K +G
Sbjct: 247 LADFLKEFPNASGTIEGHTDSVGDKAANMKLSQRRADSVRKYLVDRFGVAPERVKAVGFG 306
Query: 130 KEMPSVYGHDEDAYAKNRRAI 150
P+ KNRR
Sbjct: 307 PTKPAADNKTAAGKQKNRRIE 327
>gi|332977323|gb|EGK14111.1| OmpA/MotB family protein [Psychrobacter sp. 1501(2011)]
Length = 552
Score = 70.6 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 51/133 (38%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHD 80
++ ++ D + ++ + + F+ I + VL + +
Sbjct: 370 QSIANATTAMDNLGENPDPKDVARALSLQVINFEVDKADIPEVNKAVLDRAVEVMKNVPN 429
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+I GH D G + L RRA +V Y V++G+ AS++ G+ P +
Sbjct: 430 MQLMILGHTDSDGDDAHNQELSQRRAESVKQYLVSKGVDASKLMTKGMGETDPIATNQTD 489
Query: 141 DAYAKNRRAIVFL 153
+ +NRR +
Sbjct: 490 NGKFRNRRIEFTV 502
>gi|325860437|ref|ZP_08173549.1| OmpA family protein [Prevotella denticola CRIS 18C-A]
gi|325482095|gb|EGC85116.1| OmpA family protein [Prevotella denticola CRIS 18C-A]
Length = 286
Score = 70.6 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 45/119 (37%), Gaps = 11/119 (9%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC----------DFLIEGHADELGSR 95
S+ D++ + + SY + Q LS + + + + I D++ +
Sbjct: 147 ISLADNMLYKSGSYEVNERAEQTLSKIAKIITDYKDYDVLIEGNTDNVPINTANDKMKNI 206
Query: 96 NSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L RA +V Y R ++ R+ G+ P E +NRR + +
Sbjct: 207 RNNWDLSCLRAASVVQYLQDRFGVNPKRLTAGGRGEYNPIATNDTELGKQRNRRTQIII 265
>gi|86747898|ref|YP_484394.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
gi|86570926|gb|ABD05483.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
Length = 464
Score = 70.6 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 2/134 (1%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVG-DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
+ + + ++ S Q+ F +G +V F+++S +I +L L +
Sbjct: 331 KAELSVKPAASPVDASVCQQLFDDLLGKSTVRFESASATIDKDSAGLLDRLIETAMRCPG 390
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ GH D G + AL +RA AV +Y V G++ R + YG +P +
Sbjct: 391 ASIEVAGHTDSDGEAGFNQALSEKRARAVVDYMVRAGLTPERFQAFGYGSRIPLAGNDSD 450
Query: 141 DAYAKNRRAIVFLK 154
AKNRR ++
Sbjct: 451 AGKAKNRRIDFVIR 464
>gi|228941688|ref|ZP_04104235.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228817900|gb|EEM63978.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar berliner
ATCC 10792]
Length = 153
Score = 70.6 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 18/128 (14%), Positives = 45/128 (35%), Gaps = 6/128 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+ ++ ++ +++ FD+ ++ + + + S + + + GH D
Sbjct: 18 SSSFQTKLTEKGLMVTILENILFDSGKADVKLESLGIAKEMSSLLVSASPREITVSGHTD 77
Query: 91 ELGSRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ N+ A R + + + + YG+ ++ AK
Sbjct: 78 NVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAIGYGEYRSIAPNDTQEGKAK 137
Query: 146 NRRAIVFL 153
NRR VF+
Sbjct: 138 NRRVEVFI 145
>gi|209694505|ref|YP_002262433.1| flagellar motor protein MotB [Aliivibrio salmonicida LFI1238]
gi|208008456|emb|CAQ78622.1| sodium-driven polar flagellar protein MotB [Aliivibrio salmonicida
LFI1238]
Length = 309
Score = 70.6 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 47/129 (36%), Gaps = 5/129 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
+ + +L +Q + + F S ++P ++ +G ++ + GH D
Sbjct: 166 AEGAVEVENLGQQLVIRIREKGAFPAGSAFLQPKFRPLIRQIGELVKDVPGIIRVSGHTD 225
Query: 91 ELGS----RNSSIALGLRRAYAV-FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
S+ L +RA +V +G ++ R++V P A+
Sbjct: 226 NQPLESELYRSNWDLSAQRAVSVGHEMLRVKGFNSDRLRVRGMASTEPLGPNKTAAQRAR 285
Query: 146 NRRAIVFLK 154
NRR + +
Sbjct: 286 NRRVEISIM 294
>gi|160872189|ref|ZP_02062321.1| OmpA/MotB domain protein [Rickettsiella grylli]
gi|159120988|gb|EDP46326.1| OmpA/MotB domain protein [Rickettsiella grylli]
Length = 175
Score = 70.6 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 66/161 (40%), Gaps = 15/161 (9%)
Query: 6 IFIILSAITMM------SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD--------S 51
+ + L A + + + D+ L + + F +
Sbjct: 4 MLLSLGACATPDNNEFDEANTVSTKTDSLLQTDSALTQGIEDDGFYHDENRHPLHVGDQT 63
Query: 52 VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
FD + +R D L + + LI G+ DE GSR +I LG RRA +V
Sbjct: 64 YHFDFNQSFVREEDKPSLQIQAHYLISHPQTKILIVGNTDERGSREYNIGLGQRRALSVE 123
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ +A G+S ++ SYG E P +GH E YAKNRRA +
Sbjct: 124 RFLIANGVSKKQILTVSYGAEKPVAFGHSEADYAKNRRADL 164
>gi|82523887|emb|CAI78610.1| peptidoglycan-associated lipoprotein [uncultured delta
proteobacterium]
Length = 184
Score = 70.6 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 60/129 (46%), Gaps = 1/129 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FL 84
+ +T + E ++F+ S+ +L +L +
Sbjct: 55 AAQAKAETEAMRLAKSEMLEKFKNIDIYFEFDKSSLTEEAKLILKEKALFLSANSAKNTT 114
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
IEGH DE G+ ++ALG RRA V Y GIS R+ TSYG+EMP GH+E A+A
Sbjct: 115 IEGHCDERGTSEYNLALGDRRAKNVKTYLQGLGISGQRIITTSYGEEMPVDTGHNETAWA 174
Query: 145 KNRRAIVFL 153
KNRRA +
Sbjct: 175 KNRRAHFEI 183
>gi|262360905|gb|ACY57626.1| hypothetical protein YPD4_0717 [Yersinia pestis D106004]
Length = 208
Score = 70.6 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 2/103 (1%)
Query: 53 FFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FD +++ ++L L K ++ GH D G ++ L L+RA A+ +
Sbjct: 77 LFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTDITGDAQANHILSLKRAEALRD 136
Query: 112 Y-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +S + V YG P D A NRR + L
Sbjct: 137 WMLSTSDVSPTCFAVQGYGATRPIADNDTPDGRALNRRVEISL 179
>gi|77920564|ref|YP_358379.1| peptidoglycan-associated lipoprotein [Pelobacter carbinolicus DSM
2380]
gi|77546647|gb|ABA90209.1| peptidoglycan-associated lipoprotein [Pelobacter carbinolicus DSM
2380]
Length = 190
Score = 70.6 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 3/136 (2%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
+G + + +++ + S+ + +S + ++F+ Y + P +L N +L+
Sbjct: 54 GAGETGIGESMIGEESMDDSMSMPQTVASL--ERIYFNFDRYDLSPEAQAILINNAEYLK 111
Query: 78 -KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
D IEG+ DE GS ++ALG RRA A Y + G++ R+ V SYG+EMP
Sbjct: 112 ANPDQKVRIEGYCDERGSDEYNLALGERRALAAQKYLESLGVAGDRLSVISYGEEMPLDP 171
Query: 137 GHDEDAYAKNRRAIVF 152
+EDAYA NRRA
Sbjct: 172 AQNEDAYAMNRRAEFK 187
>gi|253991307|ref|YP_003042663.1| hypothetical protein PAU_03834 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253782757|emb|CAQ85922.1| conserved hypothetical protein [Photorhabdus asymbiotica]
Length = 577
Score = 70.6 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 42/126 (33%), Gaps = 2/126 (1%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGH 88
+ + + S+ FD ++ +VL N L K +I GH
Sbjct: 418 ASPPAQPKKDKALPRTLSLNSMSLFDVGQSRLKAGSAKVLMNALIDIKAKPGWLIVISGH 477
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNR 147
D G+ + L L RA AV ++ + + V G P A NR
Sbjct: 478 TDSTGNTEKNRVLSLARAEAVRDWLLQTSDIPLACFAVQGEGATRPVATNSTAAGRAANR 537
Query: 148 RAIVFL 153
R + L
Sbjct: 538 RVEIRL 543
>gi|297560820|ref|YP_003679794.1| OmpA/MotB domain protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296845268|gb|ADH67288.1| OmpA/MotB domain protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 477
Score = 70.6 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 50/127 (39%), Gaps = 7/127 (5%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH----DCDFLIEG 87
D+ +S ++ + + V FD ++ P VL+ + ++ + G
Sbjct: 168 DSSRTRTSTTDEETIGLHADVLFDFDEATLTPEAEDVLAEVVQETRENADPSRPPIRVVG 227
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG---HDEDAYA 144
H D GS + + L RRA AV + + + G E P V DE+A A
Sbjct: 228 HTDGRGSEDYNQDLSERRAQAVLDVLEEGLGTEYEYETEGRGAEEPLVEEGGADDEEARA 287
Query: 145 KNRRAIV 151
NRR +
Sbjct: 288 TNRRVEI 294
>gi|254360704|ref|ZP_04976852.1| peptidoglycan-associated outer membrane lipoprotein [Mannheimia
haemolytica PHL213]
gi|153091274|gb|EDN73248.1| peptidoglycan-associated outer membrane lipoprotein [Mannheimia
haemolytica PHL213]
Length = 161
Score = 70.6 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 44/102 (43%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
++V+F SY++ Q+L L K + I GHADE G+ +IALG RRA AV
Sbjct: 60 NTVYFGFDSYAVEGEYRQLLDAHAQLLAKTQGNVTIAGHADERGTPEYNIALGQRRADAV 119
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
Y A+G A+ SYG+E P+V GH E YAKNRRA++
Sbjct: 120 KGYLAAKG--ANNTSTVSYGEEKPAVLGHSEADYAKNRRAVL 159
>gi|332886090|gb|EGK06334.1| hypothetical protein HMPREF9456_00208 [Dysgonomonas mossii DSM
22836]
Length = 295
Score = 70.6 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 43/114 (37%), Gaps = 6/114 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD----ELGSRNSSIA 100
S+ D + + + Y I ++LS + ++ D L+EG+ D + ++
Sbjct: 160 ISLDDRMLYRSGGYEISTKAGEILSKIAKIIMDYKDYSVLVEGNTDTDPISRPNIRNNWD 219
Query: 101 LGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V + R+ G+ P + A NRR + +
Sbjct: 220 LSALRASSVVQALQNNYGVDPKRLTAAGRGEYNPIATNSTAEGKALNRRTQIII 273
>gi|229172375|ref|ZP_04299934.1| OmpA/MotB domain protein [Bacillus cereus MM3]
gi|228610846|gb|EEK68109.1| OmpA/MotB domain protein [Bacillus cereus MM3]
Length = 227
Score = 70.6 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 53/127 (41%), Gaps = 5/127 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ +N S + D++ FDT +++P +++S L + + ++EGH D
Sbjct: 100 SQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKEIISQLVGFFQSVPNPIVVEGHTDSR 159
Query: 93 GSRNS----SIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
N + L RA + ++ + + R+ Y P V + KNR
Sbjct: 160 PIHNDKFPSNWELSSARAANMIHHLIEVYNVDDKRLAAVGYADTKPVVPNDSPQNWEKNR 219
Query: 148 RAIVFLK 154
R ++++K
Sbjct: 220 RVVIYIK 226
>gi|254439458|ref|ZP_05052952.1| OmpA family protein [Octadecabacter antarcticus 307]
gi|198254904|gb|EDY79218.1| OmpA family protein [Octadecabacter antarcticus 307]
Length = 310
Score = 70.6 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 49/132 (37%), Gaps = 2/132 (1%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIE 86
+P N S E + + F T S + A + L +L + + D +
Sbjct: 179 APTPAPDGNLSQSLEDQGRFILTGLVFQTGSAQLGDASVMSLQDLADYLIANPDRTVALV 238
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAK 145
GH D +GS + +IAL RRA +V V R + G P ED
Sbjct: 239 GHTDSVGSLDGNIALSKRRAGSVLERLVTTYDIPRRQLDAQGMGYLSPVATNLTEDGREA 298
Query: 146 NRRAIVFLKGCR 157
NRR V + +
Sbjct: 299 NRRVEVIITSTQ 310
>gi|126457554|ref|YP_001074280.1| hypothetical protein BURPS1106A_A0237 [Burkholderia pseudomallei
1106a]
gi|242313025|ref|ZP_04812042.1| OmpA family protein [Burkholderia pseudomallei 1106b]
gi|254195472|ref|ZP_04901900.1| OmpA domain protein [Burkholderia pseudomallei S13]
gi|126231322|gb|ABN94735.1| OmpA family protein [Burkholderia pseudomallei 1106a]
gi|169652219|gb|EDS84912.1| OmpA domain protein [Burkholderia pseudomallei S13]
gi|242136264|gb|EES22667.1| OmpA family protein [Burkholderia pseudomallei 1106b]
Length = 421
Score = 70.6 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 43/127 (33%), Gaps = 4/127 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
L+ + S + F + + PA ++ + + + K + G+ D
Sbjct: 293 AAGTLSVEENARRSSVTFRGDAMFAPGAAGVNPAMGPLIRKIAAEIAKVPGKVTVRGYTD 352
Query: 91 ELGSRNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
++ A L RA V + G+ ASR++ G P A N
Sbjct: 353 NQPIKSRQFASNEALSEERATQVMQMLQSAGVPASRLEALGKGGAEPIGDNRTPQGRALN 412
Query: 147 RRAIVFL 153
RR + +
Sbjct: 413 RRVEITV 419
>gi|85709689|ref|ZP_01040754.1| Photosystem I P700 chlorophyll A apoprotein A2 [Erythrobacter sp.
NAP1]
gi|85688399|gb|EAQ28403.1| Photosystem I P700 chlorophyll A apoprotein A2 [Erythrobacter sp.
NAP1]
Length = 198
Score = 70.6 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 33/180 (18%), Positives = 63/180 (35%), Gaps = 27/180 (15%)
Query: 1 MQYSTIFIILSAITMMSISGIDN----LDTKISSPDTVLNESSLQEQFSSSVGDS----- 51
MQY I L + +S +N ++P++ L + S D
Sbjct: 3 MQYRAAMIALFGLGALSACQANNDNEDAGETQTAPESPLEGAQPTAPVSILRADIDGPPL 62
Query: 52 -----------VFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSI 99
V F + + L + + + ++ H+D GS +++
Sbjct: 63 PAAPVSSFELTVGFPDGGAELDDDALAALEQIANSEQIALGGPIVLGAHSDSDGSDSANE 122
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH------DEDAYAKNRRAIVFL 153
R AV + + RG+ R+ V +G++ P+ +E+ A NRR V +
Sbjct: 123 RAAEARGLAVAGWLIERGVDEDRIDVIVFGEQNPAEPNALPDGSPNEEGRALNRRVEVLV 182
>gi|269962899|ref|ZP_06177239.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269832453|gb|EEZ86572.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 305
Score = 70.6 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 34/163 (20%), Positives = 62/163 (38%), Gaps = 9/163 (5%)
Query: 1 MQYSTIFII-LSAITMMSISGIDNLDTKIS-------SPDTVLNESSLQEQFSSSVGDSV 52
M+ + + + +++ D ++ + L L + + +
Sbjct: 1 MKTTLRLLGGVVGTLLIAGCATDTYVSQENRDKFTDLDVSKFLISECLAPEREIHIAVAE 60
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F Y+IR D L+ +E I GH D GS + AL LRRA +V ++
Sbjct: 61 HFAFDKYNIRDVDATSLNAFVHEIEGLSGRITIVGHTDYKGSLEYNEALSLRRAQSVESF 120
Query: 113 FVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ +V +G+ P G ++ A+NRRA V +
Sbjct: 121 LKEKLDPDHYDWEVKYFGETQPLALGKTDEDRAENRRAFVVFE 163
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 1/118 (0%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNS 97
+ + + FD ++P D+ L + L+ L+ GH D++GS
Sbjct: 175 EPPKPDRKIYMAMTPHFDFDESELKPEDLAKLDSFTDKLQGLQGSILVAGHTDQIGSLLY 234
Query: 98 SIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ L RRA V Y + + + +V S+G+ P + ++A A NRRA + K
Sbjct: 235 NEKLAQRRASEVVKYLKTKIDPSQFLWEVKSFGELQPVINERSKEANALNRRAFIVFK 292
>gi|213963879|ref|ZP_03392126.1| immunogenic 75 kDa protein PG4 [Capnocytophaga sputigena Capno]
gi|213953469|gb|EEB64804.1| immunogenic 75 kDa protein PG4 [Capnocytophaga sputigena Capno]
Length = 658
Score = 70.6 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 60/147 (40%), Gaps = 8/147 (5%)
Query: 15 MMSISGIDNLDTKIS-SPDTVLNESSLQEQFSSSVG-DSVFFDTSSYSIRPADIQVL-SN 71
++++G + ++ +P + ++ + + ++++FD +IR + L
Sbjct: 509 SIALNGNQKVTAEVLLTPIPATPKIAVGTDLAKVLKIENIYFDYDKANIRKDAAEQLAKI 568
Query: 72 LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
+ E + H D GS ++AL RRA + + V+ GI +R+ YG+
Sbjct: 569 VAIMKEYPTMKVDVRLHTDSRGSDKYNLALSERRAKSTIKWIVSHGIKKNRITGKGYGET 628
Query: 132 MPSVYGH-----DEDAYAKNRRAIVFL 153
E+ + NRR+ +
Sbjct: 629 QLVNGCSNGVPCTEEEHQANRRSEFII 655
>gi|167848193|ref|ZP_02473701.1| hypothetical protein BpseB_23171 [Burkholderia pseudomallei B7210]
Length = 382
Score = 70.6 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 43/127 (33%), Gaps = 4/127 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
L+ + S + F + + PA ++ + + + K + G+ D
Sbjct: 254 AAGTLSVEENARRSSVTFRGDAMFAPGAAGVNPAMGPLIRKIAAEIAKVPGKVTVRGYTD 313
Query: 91 ELGSRNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
++ A L RA V + G+ ASR++ G P A N
Sbjct: 314 NQPIKSRQFASNEALSEERATQVMQMLQSAGVPASRLEALGKGGAEPIGDNRTPQGRALN 373
Query: 147 RRAIVFL 153
RR + +
Sbjct: 374 RRVEITV 380
>gi|85704503|ref|ZP_01035605.1| hypothetical protein ROS217_05474 [Roseovarius sp. 217]
gi|85670911|gb|EAQ25770.1| hypothetical protein ROS217_05474 [Roseovarius sp. 217]
Length = 461
Score = 70.6 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 52/126 (41%), Gaps = 4/126 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ ++ Q + + S F + S ++PA LS + + L + +I GH+D
Sbjct: 331 EGIVEVFQDQSTITVRLTGSGMFGSGSDQLQPAFDTPLSRVANALNDAEGPIIIVGHSDN 390
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+ +++ L L RA +V + +R+K + + P + AKNR
Sbjct: 391 VPIKSSRFPTNMHLSLARAESVMRTLSTQIDDKARLKAEGHADKDPIADNGTSEGRAKNR 450
Query: 148 RAIVFL 153
R V L
Sbjct: 451 RIEVVL 456
>gi|313828793|gb|EFS66507.1| OmpA family protein [Propionibacterium acnes HL063PA2]
Length = 115
Score = 70.6 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 42/113 (37%), Gaps = 2/113 (1%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW--LEKHDCDFLIEGHADELGSRNSSIAL 101
+ SV FD S ++PA Q++ K + G+ D GS + ++ L
Sbjct: 1 MKIDLDASVLFDLDSDVVKPAGRQIIDRTAKQLVARKVSGKIEVTGYTDSSGSASHNLDL 60
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RRA +V ++ + G+ P E NRR + +K
Sbjct: 61 SRRRAASVAKVLGSQLSKGITLVTAGKGEADPVTSNDSEAGRRLNRRVTITVK 113
>gi|228914307|ref|ZP_04077922.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228845301|gb|EEM90337.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
Length = 227
Score = 70.6 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 53/127 (41%), Gaps = 5/127 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ +N S + D++ FDT +++P +++S L + + ++EGH D
Sbjct: 100 SQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKEIISQLVGFFQSVPNPIVVEGHTDSR 159
Query: 93 GSRNS----SIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
N + L RA + ++ + + R+ Y P V + KNR
Sbjct: 160 PIHNDKFPSNWELSSARAANMIHHLIEVYNVDDKRLAAVGYADTKPVVPNDSPQNWEKNR 219
Query: 148 RAIVFLK 154
R ++++K
Sbjct: 220 RVVIYIK 226
>gi|53721204|ref|YP_110189.1| hypothetical protein BPSS0168 [Burkholderia pseudomallei K96243]
gi|76819105|ref|YP_336847.1| hypothetical protein BURPS1710b_A1690 [Burkholderia pseudomallei
1710b]
gi|126443128|ref|YP_001061334.1| hypothetical protein BURPS668_A0328 [Burkholderia pseudomallei 668]
gi|134280864|ref|ZP_01767574.1| OmpA domain protein [Burkholderia pseudomallei 305]
gi|217423202|ref|ZP_03454704.1| OmpA family protein [Burkholderia pseudomallei 576]
gi|226198699|ref|ZP_03794263.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9]
gi|254263222|ref|ZP_04954087.1| OmpA domain protein [Burkholderia pseudomallei 1710a]
gi|52211618|emb|CAH37613.1| OmpA family membrane protein [Burkholderia pseudomallei K96243]
gi|76583578|gb|ABA53052.1| OmpA domain protein [Burkholderia pseudomallei 1710b]
gi|126222619|gb|ABN86124.1| OmpA domain protein [Burkholderia pseudomallei 668]
gi|134247886|gb|EBA47970.1| OmpA domain protein [Burkholderia pseudomallei 305]
gi|217394110|gb|EEC34130.1| OmpA family protein [Burkholderia pseudomallei 576]
gi|225929139|gb|EEH25162.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9]
gi|254214224|gb|EET03609.1| OmpA domain protein [Burkholderia pseudomallei 1710a]
Length = 421
Score = 70.6 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 43/127 (33%), Gaps = 4/127 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
L+ + S + F + + PA ++ + + + K + G+ D
Sbjct: 293 AAGTLSVEENARRSSVTFRGDAMFAPGAAGVNPAMGPLIRKIAAEIAKVPGKVTVRGYTD 352
Query: 91 ELGSRNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
++ A L RA V + G+ ASR++ G P A N
Sbjct: 353 NQPIKSRQFASNEALSEERATQVMQMLQSAGVPASRLEALGKGGAEPIGDNRTPQGRALN 412
Query: 147 RRAIVFL 153
RR + +
Sbjct: 413 RRVEITV 419
>gi|269963652|ref|ZP_06177975.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269831665|gb|EEZ85801.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 218
Score = 70.6 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 1/118 (0%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSR 95
E+ + + + V F T S + L NLG +L + D D +I+GHAD G+
Sbjct: 97 ETISGDHLMVRLKEQVHFQTGSARLSSQSEDWLRNLGHYLAGRTDVDVVIDGHADSTGAA 156
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +L +RA V +A + R+ +G+ +P A NRR + L
Sbjct: 157 TFNDSLSEKRAREVEKQLLATSLPRQRVFSRGFGEYVPQCSNATASGKACNRRVELML 214
>gi|75760652|ref|ZP_00740680.1| Chemotaxis motB protein [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|228900309|ref|ZP_04064539.1| OmpA/MotB domain protein [Bacillus thuringiensis IBL 4222]
gi|228907361|ref|ZP_04071219.1| OmpA/MotB domain protein [Bacillus thuringiensis IBL 200]
gi|228920439|ref|ZP_04083784.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228938842|ref|ZP_04101442.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228952108|ref|ZP_04114203.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228958007|ref|ZP_04119744.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228971723|ref|ZP_04132344.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228978332|ref|ZP_04138709.1| OmpA/MotB domain protein [Bacillus thuringiensis Bt407]
gi|229043482|ref|ZP_04191192.1| OmpA/MotB domain protein [Bacillus cereus AH676]
gi|229069280|ref|ZP_04202570.1| OmpA/MotB domain protein [Bacillus cereus F65185]
gi|229078910|ref|ZP_04211462.1| OmpA/MotB domain protein [Bacillus cereus Rock4-2]
gi|229109185|ref|ZP_04238784.1| OmpA/MotB domain protein [Bacillus cereus Rock1-15]
gi|229144340|ref|ZP_04272746.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST24]
gi|229149929|ref|ZP_04278157.1| OmpA/MotB domain protein [Bacillus cereus m1550]
gi|229178137|ref|ZP_04305508.1| OmpA/MotB domain protein [Bacillus cereus 172560W]
gi|229189825|ref|ZP_04316836.1| OmpA/MotB domain protein [Bacillus cereus ATCC 10876]
gi|74491866|gb|EAO55054.1| Chemotaxis motB protein [Bacillus thuringiensis serovar israelensis
ATCC 35646]
gi|228593633|gb|EEK51441.1| OmpA/MotB domain protein [Bacillus cereus ATCC 10876]
gi|228605267|gb|EEK62717.1| OmpA/MotB domain protein [Bacillus cereus 172560W]
gi|228633610|gb|EEK90211.1| OmpA/MotB domain protein [Bacillus cereus m1550]
gi|228639127|gb|EEK95551.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST24]
gi|228674195|gb|EEL29440.1| OmpA/MotB domain protein [Bacillus cereus Rock1-15]
gi|228704324|gb|EEL56758.1| OmpA/MotB domain protein [Bacillus cereus Rock4-2]
gi|228713767|gb|EEL65652.1| OmpA/MotB domain protein [Bacillus cereus F65185]
gi|228725860|gb|EEL77107.1| OmpA/MotB domain protein [Bacillus cereus AH676]
gi|228781349|gb|EEM29550.1| OmpA/MotB domain protein [Bacillus thuringiensis Bt407]
gi|228787813|gb|EEM35771.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228801714|gb|EEM48594.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228807640|gb|EEM54164.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228820691|gb|EEM66716.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228839069|gb|EEM84365.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228852222|gb|EEM97018.1| OmpA/MotB domain protein [Bacillus thuringiensis IBL 200]
gi|228859344|gb|EEN03774.1| OmpA/MotB domain protein [Bacillus thuringiensis IBL 4222]
Length = 226
Score = 70.6 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 52/127 (40%), Gaps = 5/127 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ +N S + D++ FDT +++P ++S L + + ++EGH D
Sbjct: 99 SQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKGIISQLVGFFQSVPNPIVVEGHTDSR 158
Query: 93 GSRNS----SIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
N + L RA + ++ + + R+ Y P V + KNR
Sbjct: 159 PIHNEKFPSNWELSSARAANMIHHLIEVYNVDDKRLAAVGYADTKPIVPNDSPQNWEKNR 218
Query: 148 RAIVFLK 154
R ++++K
Sbjct: 219 RVVIYIK 225
>gi|307822249|ref|ZP_07652481.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
gi|307736815|gb|EFO07660.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
Length = 100
Score = 70.6 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 36/84 (42%)
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
++ LIEGH D +GS ++ L RRAYAV+ GIS+ R++ Y P
Sbjct: 13 NKRQPDKVLIEGHTDNVGSNSTHQGLSDRRAYAVWTALNDMGISSDRIRTRGYADAYPVA 72
Query: 136 YGHDEDAYAKNRRAIVFLKGCRAN 159
NRR + L N
Sbjct: 73 GNDTTAGRQLNRRVEIILSDANGN 96
>gi|326797243|ref|YP_004315063.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
gi|326548007|gb|ADZ93227.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
Length = 201
Score = 70.6 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 54/134 (40%), Gaps = 2/134 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD- 80
D + SV ++ FD+ Y ++P + L +++ +
Sbjct: 49 DRCANTPRGAKVDNYGCPTVNKRLLSVELNILFDSGKYVVKPRFYGEVKKLADFMKSNAG 108
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHD 139
+IEGH D++G+ + + AL RA A+ + + I R++ YG+ P
Sbjct: 109 SSVVIEGHTDDVGAADYNEALSQNRADAIADVLINSFKIDRKRVEAIGYGESKPIADNET 168
Query: 140 EDAYAKNRRAIVFL 153
D A NRR + +
Sbjct: 169 IDGRATNRRVVAEV 182
>gi|126741155|ref|ZP_01756836.1| hypothetical protein RSK20926_01547 [Roseobacter sp. SK209-2-6]
gi|126717792|gb|EBA14513.1| hypothetical protein RSK20926_01547 [Roseobacter sp. SK209-2-6]
Length = 474
Score = 70.6 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 39/114 (34%), Gaps = 4/114 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ S F + S + A + L L ++ GH+D + S++
Sbjct: 355 LIIRLAGSGMFGSGSDQLSKAFRTPVQRLAEALNDEKGQVIVVGHSDNIPIRSSRFPSNM 414
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AL L RA +V R+ + P + AKNRR + L
Sbjct: 415 ALSLARAKSVMEGMAKAMAEPERLSAEGRADQEPIADNGTKAGRAKNRRIEILL 468
>gi|119896707|ref|YP_931920.1| putative peptidoglycan-associated lipoprotein [Azoarcus sp. BH72]
gi|119669120|emb|CAL93033.1| putative peptidoglycan-associated lipoprotein [Azoarcus sp. BH72]
Length = 172
Score = 70.6 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 73/167 (43%), Gaps = 23/167 (13%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNE------------------SSLQE 42
M+ ++L A+ ++ + + +S V + ++L +
Sbjct: 1 MKK----LVLPALLSAVLAACSSTGPEATSGAAVTDRSGAGVATVTANTPSGSGIAALTD 56
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIAL 101
+ +VFFD SY I+ ++ G + + L++G+ADE GSR ++AL
Sbjct: 57 PNNILSKRNVFFDFDSYVIKADAKPLVEAHGRFLAQNPQMKMLVQGNADERGSREYNLAL 116
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
G +RA AV + G ++++ S G+E P E +A+NRR
Sbjct: 117 GQKRADAVKQALLLLGAKEAQIESVSLGEEKPRCTESSEACFAQNRR 163
>gi|254228902|ref|ZP_04922324.1| OmpA family protein [Vibrio sp. Ex25]
gi|262396751|ref|YP_003288604.1| protein F-related protein [Vibrio sp. Ex25]
gi|151938579|gb|EDN57415.1| OmpA family protein [Vibrio sp. Ex25]
gi|262340345|gb|ACY54139.1| protein F-related protein [Vibrio sp. Ex25]
Length = 224
Score = 70.6 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 1/111 (0%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALG 102
+ + V F T S + + N+G +L + D D +I+GHAD G+ + + L
Sbjct: 110 LMIRLKEQVHFQTGSAQLSAQSQDWIRNIGHYLAGRTDVDVVIDGHADSTGAASFNDTLS 169
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+RA V +A I R+ +G+ +P + A NRR + L
Sbjct: 170 EKRAREVEKQLLATSIPRQRVFSRGFGEYVPQCSNSTANGKACNRRVELTL 220
>gi|328958204|ref|YP_004375590.1| flagellar motor protein MotB [Carnobacterium sp. 17-4]
gi|328674528|gb|AEB30574.1| flagellar motor protein MotB [Carnobacterium sp. 17-4]
Length = 249
Score = 70.6 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 53/140 (37%), Gaps = 8/140 (5%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FL 84
S + + S + S D++FFD+ + I+ ++G L +
Sbjct: 103 TSELNDSVTTSIEERGLVLSFNDALFFDSGNAEIKADQQNKFVDIGKLLNQPALKDSFIR 162
Query: 85 IEGHADE----LGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHD 139
+EG+ D S+ L + RA V + GI+ +R+ V YG+ P
Sbjct: 163 VEGYTDSVPVSNPKYKSNWDLSVLRASNVAQIIINDSGINPNRVSVVGYGEYRPKSDNKT 222
Query: 140 EDAYAKNRRAIVFLKGCRAN 159
+ +NRR + + N
Sbjct: 223 NEGRVENRRVDILILNSEFN 242
>gi|315186378|gb|EFU20138.1| OmpA/MotB domain protein [Spirochaeta thermophila DSM 6578]
Length = 239
Score = 70.6 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 47/131 (35%), Gaps = 9/131 (6%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV----LSNLGSWLEKHDCDFLIEG 87
+ + ++ FF ++S + + LSNL + E IEG
Sbjct: 103 AKTVRVKQDERGLVITLAADAFFRSASAELNIEAARETLIKLSNLLTSPELEGRKIRIEG 162
Query: 88 HADELGS-----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
H D++ + S+ L RA V ++ G+ + +V +P +
Sbjct: 163 HTDDVPTDPAGPWPSNWELSSARAINVLHFLSDYGVDENHFQVMGLADTVPLADNSTPEG 222
Query: 143 YAKNRRAIVFL 153
A NRR + +
Sbjct: 223 RAYNRRIDIVI 233
>gi|255021344|ref|ZP_05293392.1| Flagellar motor rotation protein MotB [Acidithiobacillus caldus
ATCC 51756]
gi|254969207|gb|EET26721.1| Flagellar motor rotation protein MotB [Acidithiobacillus caldus
ATCC 51756]
Length = 279
Score = 70.6 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 43/115 (37%), Gaps = 4/115 (3%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSS 98
+ + F + ++ P Q L+ + L+ + G ++L S+
Sbjct: 142 GVVIDLNAKILFPSGQATLTPEAQQNLAAIAKILKTVPYQIQVNGFTNDLPIRTAQFPSN 201
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA AV F+A G++ + YG+ P + A NRR + +
Sbjct: 202 WYLSAARAVAVTELFIAEGVNPEHLVAAGYGQYHPIEPNNTAAGLAMNRRVSIVV 256
>gi|302038649|ref|YP_003798971.1| peptidoglycan-associated lipoprotein pal [Candidatus Nitrospira
defluvii]
gi|300606713|emb|CBK43046.1| Peptidoglycan-associated lipoprotein Pal (modular protein)
[Candidatus Nitrospira defluvii]
Length = 250
Score = 70.6 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVG-DSVFFDTSSYSIRPADIQVLSNLGSWL 76
++ ++ ++ + + E + ++ S+ G VFF S++I Q L+ W+
Sbjct: 110 LAKVEPSESTARQIEDIRREQAKEQAASAEAGLRDVFFGYDSWTITEEGRQSLTQDAQWI 169
Query: 77 EKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+ + IEGH DE G+ ++ LG +RA AV NY V G+ A+R+ V SYGKE P
Sbjct: 170 KANAGALVKIEGHCDERGTLAYNLVLGEKRAKAVRNYLVELGVGANRLAVVSYGKERPFC 229
Query: 136 YGHDEDAYAKNRRAIVFLK 154
+E Y +NRR V ++
Sbjct: 230 NERNESCYQQNRRGHVVVR 248
>gi|253997443|ref|YP_003049507.1| peptidoglycan-associated lipoprotein [Methylotenera mobilis JLW8]
gi|253984122|gb|ACT48980.1| peptidoglycan-associated lipoprotein [Methylotenera mobilis JLW8]
Length = 191
Score = 70.6 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 64/140 (45%), Gaps = 1/140 (0%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
S + + + + + L++ + +++FD S S++ ++ +L
Sbjct: 51 SAADTSGVKEVVIDSNANNGNNPLKDPNNILSKRNIYFDFDSDSVKAEYRPIVEAHAKYL 110
Query: 77 -EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+ +++G+ DE G+R +++LG RRA +V F G+ +++ S G+E S
Sbjct: 111 LANSNAKVVLQGNTDERGTREYNVSLGQRRAVSVKKSFNLLGVQDKQIETVSLGEEKASA 170
Query: 136 YGHDEDAYAKNRRAIVFLKG 155
DE + +NRR V +
Sbjct: 171 NCADEACHQQNRRVEVVYEN 190
>gi|189219501|ref|YP_001940142.1| Outer membrane protein or related peptidoglycan-associated
(lipo)protein [Methylacidiphilum infernorum V4]
gi|189186359|gb|ACD83544.1| Outer membrane protein or related peptidoglycan-associated
(lipo)protein [Methylacidiphilum infernorum V4]
Length = 528
Score = 70.2 bits (170), Expect = 8e-11, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 51/126 (40%), Gaps = 5/126 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEG 87
P + S+ V + F + + + L +L + + L+ G
Sbjct: 400 PADASTRYRTLVKDSTRVPFDIRFRFGTAELDNKGRVDIQRLARFLSEAENSDKGVLLIG 459
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
D +GS ++ L L RA +V +RGI+ + V G+EMP E+ KNR
Sbjct: 460 FTDNVGSHTYNLGLSLERAQSVAKALESRGITV--VNVAGAGEEMPVASNESEEGREKNR 517
Query: 148 RAIVFL 153
R V+L
Sbjct: 518 RVEVWL 523
>gi|124005068|ref|ZP_01689910.1| peptidoglycan-associated cytoplasmic membrane protein, putative
[Microscilla marina ATCC 23134]
gi|123989320|gb|EAY28881.1| peptidoglycan-associated cytoplasmic membrane protein, putative
[Microscilla marina ATCC 23134]
Length = 680
Score = 70.2 bits (170), Expect = 8e-11, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADELGSRNSSIALGLRRA 106
+G V F SY I+P I L ++ ++L+++ + I GH D +G+R + L RR+
Sbjct: 566 LGLQVLFGFDSYQIQPRYISHLDSIANYLKEYTEMVVEISGHTDNIGNRWYNNLLAKRRS 625
Query: 107 YAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAI-VFLK 154
AV NY + + + ++ Y P A NRR + +K
Sbjct: 626 QAVINYLINKKGIPAAQVVFKGYADSKPLGTNTTVTGRALNRRVDGIVIK 675
>gi|71064857|ref|YP_263584.1| OmpA family outer membrane protein [Psychrobacter arcticus 273-4]
gi|71037842|gb|AAZ18150.1| possible outer membrane protein, OmpA family [Psychrobacter
arcticus 273-4]
Length = 533
Score = 70.2 bits (170), Expect = 8e-11, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 51/133 (38%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHD 80
D+L ++ D + ++ + V F+ I A+ +L + + +
Sbjct: 350 DSLTASEAAMDNLGQNPDPRDVARALSLQVVNFEVDKALIPDANKALLDRAVKLMEQVPN 409
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+I GH D+ ++ L RA A+ Y VA+G S++ G+ P +
Sbjct: 410 MTLMIIGHTDKTADAAYNLKLSEERAQAMKAYLVAQGADPSKLMTKGMGETDPIADNTTD 469
Query: 141 DAYAKNRRAIVFL 153
+NRR +
Sbjct: 470 QGRFRNRRIEFVV 482
>gi|39996844|ref|NP_952795.1| OmpA domain-containing protein [Geobacter sulfurreducens PCA]
gi|39983732|gb|AAR35122.1| OmpA domain protein [Geobacter sulfurreducens PCA]
gi|298505859|gb|ADI84582.1| OmpA family outer membrane protein [Geobacter sulfurreducens KN400]
Length = 524
Score = 70.2 bits (170), Expect = 8e-11, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 4/134 (2%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK-- 78
+ + +++S ++ D V FD +S+ + LS + + +
Sbjct: 384 VKGQNFQVASAVHENIPEAMTVYRKFRFPD-VSFDFDQWSLSAEGKKALSEVAEQIRRDK 442
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYG 137
I+GHAD +GS ++ L L+RA +V +Y +AR I SR+ V GK P
Sbjct: 443 RWVYLRIDGHADNIGSVGYNMDLSLKRAISVASYLIAREGIDPSRLFVKGLGKSKPIGDN 502
Query: 138 HDEDAYAKNRRAIV 151
+ NRR +
Sbjct: 503 KTAEGRKLNRRGEI 516
>gi|194333586|ref|YP_002015446.1| peptidoglycan-associated lipoprotein [Prosthecochloris aestuarii
DSM 271]
gi|194311404|gb|ACF45799.1| peptidoglycan-associated lipoprotein [Prosthecochloris aestuarii
DSM 271]
Length = 169
Score = 70.2 bits (170), Expect = 8e-11, Method: Composition-based stats.
Identities = 41/161 (25%), Positives = 65/161 (40%), Gaps = 14/161 (8%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTV-------------LNESSLQEQFSSSVGDSVFF 54
I++ A + + + V + VFF
Sbjct: 9 IVVCAFLVTGCASKSSQSIIGGDTGVVNGNGYGDSSVRTYSEAEEALRDEARLALKDVFF 68
Query: 55 DTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYF 113
S + L W+ +IEGH DE G+ ++ALG RRA ++
Sbjct: 69 SFESADLDILATTQLKRNAEWMIAHPSVSVIIEGHCDERGTGEFNMALGERRADISKSFL 128
Query: 114 VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
V G+++SR++ SYG+E P GHD+ A+AKNRRA ++
Sbjct: 129 VKAGVASSRIQTVSYGEERPFEAGHDDSAWAKNRRAHFVVE 169
>gi|171060724|ref|YP_001793073.1| hypothetical protein Lcho_4056 [Leptothrix cholodnii SP-6]
gi|170778169|gb|ACB36308.1| type IV / VI secretion system protein, DotU family [Leptothrix
cholodnii SP-6]
Length = 460
Score = 70.2 bits (170), Expect = 8e-11, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 44/127 (34%), Gaps = 4/127 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
+ + ++ ++ F+ S ++ +L + L + L+ GH D
Sbjct: 307 AEGAVVVRDEVDRSVVTLRGDGLFEPGSATLAAPKEALLRRVADALAQFGGAVLVTGHTD 366
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S+ L RA AV V++ ++ R++ P V A N
Sbjct: 367 SQPIRSARFPSNWHLSQERAGAVRELLVSQQVATERVRAEGRADGEPVVANDSAGNRALN 426
Query: 147 RRAIVFL 153
RR + L
Sbjct: 427 RRVEITL 433
>gi|51246716|ref|YP_066600.1| peptidoglycan-associated lipoprotein [precursor] [Desulfotalea
psychrophila LSv54]
gi|50877753|emb|CAG37593.1| related to peptidoglycan-associated lipoprotein [Precursor]
[Desulfotalea psychrophila LSv54]
Length = 177
Score = 70.2 bits (170), Expect = 8e-11, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 71/172 (41%), Gaps = 20/172 (11%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDS---------- 51
+F L +++++++G + D VL ++E
Sbjct: 4 NVKLLFPALVGLSVLTLAGCTCVKPGEECADPVLMTEVVEEVVVIEEPLDTVVVPLGIGE 63
Query: 52 ---------VFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIAL 101
V+F+ S ++ + +++ + D IEG+ D G+ ++AL
Sbjct: 64 ARTTEGMLPVYFNFDSSAVGEDQKPRVQVNADFMDANVDYMVRIEGNTDSRGTDEYNMAL 123
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G RRA + Y + G+ +R+ SYGKE + G EDA+++NRR +
Sbjct: 124 GERRALSAQQYLMDLGVEEARLTTVSYGKERLLLNGQSEDAWSQNRRCDFVV 175
>gi|325068016|ref|ZP_08126689.1| OmpA/MotB domain protein [Actinomyces oris K20]
Length = 553
Score = 70.2 bits (170), Expect = 8e-11, Method: Composition-based stats.
Identities = 25/160 (15%), Positives = 60/160 (37%), Gaps = 10/160 (6%)
Query: 2 QYSTIFIILSAITMM-------SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFF 54
+ + I + ++ + ++ ++ + D + + + + ++ V F
Sbjct: 203 KKAKIDLSIAQAALKQSSHDVPELAAPVAIERYTRALDDSTSTHAGGKDITVTLASDVTF 262
Query: 55 DTSSYSIRPADIQVLSNLGSWLEKHD--CDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
+ S + L+ + S L++H + GH D++ + L +RA AV
Sbjct: 263 ASDSADLASGAEAQLNTVASQLKQHPDGGTLTVVGHTDDVQDDAYNQTLSEKRANAVKTR 322
Query: 113 FVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ V+ G+ P + ++A A NRR +
Sbjct: 323 LEQLTSLDKWQTSVSGKGESEPKIKDTSDEARAANRRVEI 362
>gi|237509611|ref|ZP_04522326.1| type VI secretion system OmpA/MotB family protein [Burkholderia
pseudomallei MSHR346]
gi|235001816|gb|EEP51240.1| type VI secretion system OmpA/MotB family protein [Burkholderia
pseudomallei MSHR346]
Length = 421
Score = 70.2 bits (170), Expect = 8e-11, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 43/127 (33%), Gaps = 4/127 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
L+ + S + F + + PA ++ + + + + + G+ D
Sbjct: 293 AAGTLSVEENARRSSVTFRGDAMFAPGAAGVNPAMGPLIRKIAAEIARVPGKVTVRGYTD 352
Query: 91 ELGSRNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
++ A L RA V + G+ ASR++ G P A N
Sbjct: 353 NQPIKSRQFASNEALSEERATQVMQMLQSAGVPASRLEALGKGGAEPIGDNRTPQGRALN 412
Query: 147 RRAIVFL 153
RR + +
Sbjct: 413 RRVEITV 419
>gi|317048541|ref|YP_004116189.1| DotU family type IV / VI secretion system protein [Pantoea sp.
At-9b]
gi|316950158|gb|ADU69633.1| type IV / VI secretion system protein, DotU family [Pantoea sp.
At-9b]
Length = 404
Score = 70.2 bits (170), Expect = 8e-11, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 37/126 (29%), Gaps = 3/126 (2%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
L S + F + +L+++ S ++ L+ + D
Sbjct: 265 AAGQLEVSDGAFGSKVIIPADKLFAADGTVVNQVGRALLAHVASAMKTVKGTVLVSVYTD 324
Query: 91 ELG---SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
SS RA A+ + +K G P + + A+NR
Sbjct: 325 NSPVDGRFVSSYEFSFARARAIAQLLNPQLAEGHSVKAEGRGDSNPLLPNDSNENRARNR 384
Query: 148 RAIVFL 153
R + L
Sbjct: 385 RVEITL 390
>gi|225024496|ref|ZP_03713688.1| hypothetical protein EIKCOROL_01371 [Eikenella corrodens ATCC
23834]
gi|224942771|gb|EEG23980.1| hypothetical protein EIKCOROL_01371 [Eikenella corrodens ATCC
23834]
Length = 217
Score = 70.2 bits (170), Expect = 8e-11, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 48/121 (39%), Gaps = 12/121 (9%)
Query: 47 SVGDSVFFDTSSYSIR---PADIQVLSNLGSWLEKHD--CDFLIEGHADELGSRNSSIAL 101
++ V F S + P + L+ L + L + + GH D LGS + L
Sbjct: 93 TLSADVLFAFDRSSEQDLQPRGREELTELAAQLRNFEQLNSITVIGHTDYLGSDAYNQNL 152
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK-------NRRAIVFLK 154
+RA V Y A+G+ A +++ G+ P + ++ NRR + +
Sbjct: 153 SQQRAETVRRYLAAQGLPADKIRAVGMGESQPVKQCDNHGGRSQLIACLQPNRRVEIQVD 212
Query: 155 G 155
G
Sbjct: 213 G 213
>gi|30019773|ref|NP_831404.1| flagellar motor protein MotS [Bacillus cereus ATCC 14579]
gi|229127054|ref|ZP_04256053.1| OmpA/MotB domain protein [Bacillus cereus BDRD-Cer4]
gi|29895318|gb|AAP08605.1| Chemotaxis motB protein [Bacillus cereus ATCC 14579]
gi|228656407|gb|EEL12246.1| OmpA/MotB domain protein [Bacillus cereus BDRD-Cer4]
Length = 226
Score = 70.2 bits (170), Expect = 8e-11, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 52/127 (40%), Gaps = 5/127 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ +N S + D++ FDT +++P ++S L + + ++EGH D
Sbjct: 99 SQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKGIISQLVGFFQSVPNPIVVEGHTDSR 158
Query: 93 GSRNS----SIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
N + L RA + ++ + + R+ Y P V + KNR
Sbjct: 159 PIHNEKFPSNWELSSARAANMIHHLIEVYNVDDKRLAAVGYADTKPIVPNDSPQNWEKNR 218
Query: 148 RAIVFLK 154
R ++++K
Sbjct: 219 RVVIYIK 225
>gi|67642544|ref|ZP_00441299.1| OmpA domain protein [Burkholderia mallei GB8 horse 4]
gi|121597981|ref|YP_990526.1| hypothetical protein BMASAVP1_0927 [Burkholderia mallei SAVP1]
gi|124381968|ref|YP_001025016.1| hypothetical protein BMA10229_1214 [Burkholderia mallei NCTC 10229]
gi|126447715|ref|YP_001079360.1| hypothetical protein BMA10247_A2189 [Burkholderia mallei NCTC
10247]
gi|166999157|ref|ZP_02265003.1| OmpA family protein [Burkholderia mallei PRL-20]
gi|254176494|ref|ZP_04883152.1| OmpA domain protein [Burkholderia mallei ATCC 10399]
gi|254203448|ref|ZP_04909809.1| OmpA family protein [Burkholderia mallei FMH]
gi|254205327|ref|ZP_04911680.1| OmpA family protein [Burkholderia mallei JHU]
gi|254299607|ref|ZP_04967056.1| OmpA domain protein [Burkholderia pseudomallei 406e]
gi|254356134|ref|ZP_04972411.1| OmpA family protein [Burkholderia mallei 2002721280]
gi|121225779|gb|ABM49310.1| OmpA domain protein [Burkholderia mallei SAVP1]
gi|126240569|gb|ABO03681.1| OmpA domain protein [Burkholderia mallei NCTC 10247]
gi|147745687|gb|EDK52766.1| OmpA family protein [Burkholderia mallei FMH]
gi|147754913|gb|EDK61977.1| OmpA family protein [Burkholderia mallei JHU]
gi|148025117|gb|EDK83286.1| OmpA family protein [Burkholderia mallei 2002721280]
gi|157809319|gb|EDO86489.1| OmpA domain protein [Burkholderia pseudomallei 406e]
gi|160697536|gb|EDP87506.1| OmpA domain protein [Burkholderia mallei ATCC 10399]
gi|238523712|gb|EEP87149.1| OmpA domain protein [Burkholderia mallei GB8 horse 4]
gi|243064713|gb|EES46899.1| OmpA family protein [Burkholderia mallei PRL-20]
gi|261826580|gb|ABM99761.2| OmpA domain protein [Burkholderia mallei NCTC 10229]
Length = 421
Score = 70.2 bits (170), Expect = 8e-11, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 43/127 (33%), Gaps = 4/127 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
L+ + S + F + + PA ++ + + + + + G+ D
Sbjct: 293 AAGTLSVEENARRSSVTFRGDAMFAPGAAGVNPAMGPLIRKIAAEIARVPGKVTVRGYTD 352
Query: 91 ELGSRNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
++ A L RA V + G+ ASR++ G P A N
Sbjct: 353 NQPIKSRQFASNEALSEERATQVMQMLQSAGVPASRLEALGKGGAEPIGDNRTPQGRALN 412
Query: 147 RRAIVFL 153
RR + +
Sbjct: 413 RRVEITV 419
>gi|325953930|ref|YP_004237590.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
gi|323436548|gb|ADX67012.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
Length = 284
Score = 70.2 bits (170), Expect = 8e-11, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 6/114 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADE----LGSRNSSIA 100
S+ D++ + + SY I PA + LS + ++ + D LIEG+ D + ++
Sbjct: 153 ISLADNMLYKSGSYEISPAAGETLSKIAKIIKDYRDYDVLIEGNTDNVPINRPNIRNNWD 212
Query: 101 LGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V + + R+ G+ P E+ +KNRR + +
Sbjct: 213 LSALRASSVVQALQNQYGVDPKRLTAGGRGEYNPVTTNATEEGKSKNRRTQIII 266
>gi|283786435|ref|YP_003366300.1| T6SS protein Cts1U [Citrobacter rodentium ICC168]
gi|282949889|emb|CBG89514.1| T6SS protein Cts1U [Citrobacter rodentium ICC168]
Length = 451
Score = 70.2 bits (170), Expect = 8e-11, Method: Composition-based stats.
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
L+ Q+Q + F + S ++P ++V+ + S +++ + D LI GH D
Sbjct: 327 LSVDENQKQSKVVLKGDALFLSGSVRVQPEMVKVIERIASEVQRVNGDVLIVGHTDATPI 386
Query: 95 R----NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
+++AL +RA V YF+A G+ S++KV G P AKNRR
Sbjct: 387 SRPGLPNNVALSEKRAAEVAQYFIAAGLPESKVKVRGVGSSQPVANEATAQGRAKNRRVE 446
Query: 151 VFL 153
F+
Sbjct: 447 FFV 449
>gi|207092711|ref|ZP_03240498.1| peptidoglycan associated lipoprotein precursor (omp18)
[Helicobacter pylori HPKX_438_AG0C1]
Length = 167
Score = 70.2 bits (170), Expect = 8e-11, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 2/155 (1%)
Query: 1 MQYSTIFIILSA--ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSS 58
M T+ +SA + ++ + + + S ++ S++FD
Sbjct: 11 MDNKTVAGDVSAKTVQTAPVTTEPAPEKEEPKEEPAPVVEEKPAIESGTIIASIYFDFDK 70
Query: 59 YSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI 118
Y I+ +D + L + +++ L+EG+ DE GS + ALG++R +V N V +G+
Sbjct: 71 YEIKESDQETLDEIVQKAKENHMQVLLEGNTDEFGSSEYNQALGVKRTLSVKNALVIKGV 130
Query: 119 SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+K S+G+ P + Y +NRR V L
Sbjct: 131 EKDMIKTISFGETKPKCAQKTRECYKENRRVDVKL 165
>gi|120597137|ref|YP_961711.1| OmpA/MotB domain-containing protein [Shewanella sp. W3-18-1]
gi|120557230|gb|ABM23157.1| OmpA/MotB domain protein [Shewanella sp. W3-18-1]
Length = 481
Score = 70.2 bits (170), Expect = 8e-11, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 50/122 (40%), Gaps = 2/122 (1%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRN 96
+ Q + + + FD S + P VL L ++L+++ F + GH D+ G R+
Sbjct: 359 TDAISQTGKATLEGLLFDYDSERMLPESKPVLEVLATYLKQNPALSFYVVGHTDDKGERS 418
Query: 97 SSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+ +L RRA AV ++ G+ P ++ NRR + L+
Sbjct: 419 YNQSLSERRAAAVIKQLNETFNIPSVQLTAHGNGEYSPVASNANDTGQRLNRRVELVLRS 478
Query: 156 CR 157
+
Sbjct: 479 DK 480
>gi|254189549|ref|ZP_04896059.1| OmpA domain protein [Burkholderia pseudomallei Pasteur 52237]
gi|157937227|gb|EDO92897.1| OmpA domain protein [Burkholderia pseudomallei Pasteur 52237]
Length = 421
Score = 70.2 bits (170), Expect = 8e-11, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 43/127 (33%), Gaps = 4/127 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
L+ + S + F + + PA ++ + + + + + G+ D
Sbjct: 293 AAGTLSVEENARRSSVTFRGDAMFAPGAAGVNPAMGPLIRKIAAEIARVPGKVTVRGYTD 352
Query: 91 ELGSRNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
++ A L RA V + G+ ASR++ G P A N
Sbjct: 353 NQPIKSRQFASNEALSEERATQVMQMLQSAGVPASRLEALGKGGAEPIGDNRTPQGRALN 412
Query: 147 RRAIVFL 153
RR + +
Sbjct: 413 RRVEITV 419
>gi|327312584|ref|YP_004328021.1| OmpA family protein [Prevotella denticola F0289]
gi|326944583|gb|AEA20468.1| OmpA family protein [Prevotella denticola F0289]
Length = 288
Score = 70.2 bits (170), Expect = 8e-11, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 45/119 (37%), Gaps = 11/119 (9%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC----------DFLIEGHADELGSR 95
S+ D++ + + SY + Q LS + + + + I D++ +
Sbjct: 149 ISLADNMLYKSGSYEVNERAEQTLSKIAKIITDYKDYDVLIEGNTDNVPINTANDKMKNI 208
Query: 96 NSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L RA +V Y R ++ R+ G+ P E +NRR + +
Sbjct: 209 RNNWDLSCLRAASVVQYLQDRFGVNPKRLTAGGRGEYNPIATNDTELGKQRNRRTQIII 267
>gi|311069471|ref|YP_003974394.1| flagellar motor protein MotS [Bacillus atrophaeus 1942]
gi|310869988|gb|ADP33463.1| flagellar motor protein MotS [Bacillus atrophaeus 1942]
Length = 209
Score = 70.2 bits (170), Expect = 8e-11, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 46/131 (35%), Gaps = 5/131 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+ + + ++V FDT ++ +L + L+ + +EGH D
Sbjct: 78 MTAKRDERGVILVLQEAVLFDTGEAAVLKDAETLLHQIAVLLQTMPNEIQVEGHTDSRNI 137
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
S+ L RA V YF ++ R Y MP D +NRR
Sbjct: 138 STYRYPSNWELSAARASGVIQYFTSKENLPSKRFIAVGYADTMPVKDNKTADHMKENRRV 197
Query: 150 IVFLKGCRANT 160
+ +K + +
Sbjct: 198 EIVIKKSKTTS 208
>gi|71906334|ref|YP_283921.1| OmpA/MotB [Dechloromonas aromatica RCB]
gi|71845955|gb|AAZ45451.1| OmpA/MotB [Dechloromonas aromatica RCB]
Length = 165
Score = 70.2 bits (170), Expect = 8e-11, Method: Composition-based stats.
Identities = 35/155 (22%), Positives = 67/155 (43%), Gaps = 13/155 (8%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTV------------LNESSLQEQFSSSVGDSVFFDTS 57
L AI ++ + + + L L+E G S++FD
Sbjct: 6 LLAIGLVGCASSPKEEAVATVAVAPKAATASAPSAAELEARQLKEAAEKLAGKSIYFDYD 65
Query: 58 SYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
+++I+ +L L+++ +EG+ DE GS +++LG +RA AV
Sbjct: 66 NFTIKTEYNALLQQQAELLKRYPKLGVSLEGNTDERGSSEYNLSLGQKRAEAVRKALTIL 125
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
G+ ++++ S+GKE P +E +++NRR
Sbjct: 126 GVPEAKVEAVSFGKEKPKADCPEEKCWSQNRRVDF 160
>gi|239813534|ref|YP_002942444.1| type IV / VI secretion system protein, DotU family [Variovorax
paradoxus S110]
gi|239800111|gb|ACS17178.1| type IV / VI secretion system protein, DotU family [Variovorax
paradoxus S110]
Length = 442
Score = 70.2 bits (170), Expect = 8e-11, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 43/123 (34%), Gaps = 5/123 (4%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+ + ++ + FF + S A + VL +G L + + LI GH+D
Sbjct: 306 VTVTDEADRSVVRLRGDSFFGSGSAEPMAASLPVLRRIGQALAEVKGEVLITGHSDNQPI 365
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
S+ L RA AV +RM+ P A+NRR
Sbjct: 366 RSLRYPSNWHLSAARADAVKGALTTLVE-PARMRSDGKADAEPVAANDTPANRARNRRVD 424
Query: 151 VFL 153
+ L
Sbjct: 425 IVL 427
>gi|94970145|ref|YP_592193.1| OmpA/MotB family outer membrane protein [Candidatus Koribacter
versatilis Ellin345]
gi|94552195|gb|ABF42119.1| outer membrane protein, OmpA/MotB family [Candidatus Koribacter
versatilis Ellin345]
Length = 242
Score = 70.2 bits (170), Expect = 8e-11, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 44/143 (30%), Gaps = 2/143 (1%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE- 77
+ N ++ + + SV F + L LG
Sbjct: 86 AANKNATQVNGQVASLAGTVENLDNYKPVAESSVHFGFDKADLTKKAKDALDQLGGQFSS 145
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVY 136
+EG D G + + L RRA AV Y + ++ + GK+ P
Sbjct: 146 TKHFIIEVEGSTDSTGDADYNYQLSKRRADAVIQYLADKYQIPAHKIYLIGLGKDKPVEK 205
Query: 137 GHDEDAYAKNRRAIVFLKGCRAN 159
+ AKNRR V L +
Sbjct: 206 NATSEGRAKNRRVDVRLMTNTGD 228
>gi|322432961|ref|YP_004210210.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
gi|321165188|gb|ADW70892.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
Length = 239
Score = 70.2 bits (170), Expect = 8e-11, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 48/126 (38%), Gaps = 5/126 (3%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-- 95
+ F S+ + FF++ ++ P L + L + + +EGH+D+
Sbjct: 108 QQTADGFIISLRELGFFNSGEATLLPGAAAKLQDTAKVLMEDGLEVRVEGHSDDQPIHNG 167
Query: 96 --NSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
S+ L RA +V + G +++ V YG P D NRR +
Sbjct: 168 QFQSNWELSTARAMSVLSLLVDEAGFPPTKISVAGYGPYHPVADNATLDGRRSNRRVDLV 227
Query: 153 LKGCRA 158
+ R+
Sbjct: 228 VLSPRS 233
>gi|261212057|ref|ZP_05926343.1| Flagellar motor rotation protein MotB [Vibrio sp. RC341]
gi|260838665|gb|EEX65316.1| Flagellar motor rotation protein MotB [Vibrio sp. RC341]
Length = 304
Score = 70.2 bits (170), Expect = 8e-11, Method: Composition-based stats.
Identities = 21/127 (16%), Positives = 42/127 (33%), Gaps = 5/127 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ +L +Q + + F S ++P ++ + ++ + GH D
Sbjct: 158 QGAIEVENLGQQIDIRIREKGAFPEGSAFLQPKFRPLVRQIADLVKDIPGKVRVTGHTDN 217
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S+ L +RA +V +G R++V P E N
Sbjct: 218 QKLDSELYRSNWDLSAQRAVSVAQEMEKVKGFDHQRLQVRGMADTQPLGPNDTEAQRTIN 277
Query: 147 RRAIVFL 153
RR + +
Sbjct: 278 RRVEISI 284
>gi|229186744|ref|ZP_04313902.1| OmpA/MotB domain protein [Bacillus cereus BGSC 6E1]
gi|228596757|gb|EEK54419.1| OmpA/MotB domain protein [Bacillus cereus BGSC 6E1]
Length = 234
Score = 70.2 bits (170), Expect = 8e-11, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 45/128 (35%), Gaps = 6/128 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+ ++ ++ ++V FD+ ++ + + + S + + + GH D
Sbjct: 99 SSSFQTKLTEKGLMVTILENVLFDSGKADVKLESLGIAKEMSSLLVSASPREITVSGHTD 158
Query: 91 ELGSRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ N+ A R + + + + YG+ ++ AK
Sbjct: 159 NVPIANAQFASNWELSTQRAVNFMQVLLQNKELQPEKFSAIGYGEYRSIAPNDTQEGKAK 218
Query: 146 NRRAIVFL 153
NRR VF+
Sbjct: 219 NRRVEVFI 226
>gi|149191103|ref|ZP_01869362.1| flagellar motor protein MotB [Vibrio shilonii AK1]
gi|148835031|gb|EDL52009.1| flagellar motor protein MotB [Vibrio shilonii AK1]
Length = 294
Score = 70.2 bits (170), Expect = 8e-11, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 45/128 (35%), Gaps = 5/128 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ +L +Q + + F S ++P ++ + ++ + GH D
Sbjct: 152 QGAVEVDNLGQQLVIRIQEKGAFPEGSAFLQPKFRPLVRQVADLVKDIPGQVRVSGHTDN 211
Query: 92 ----LGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S+ L +RA +V +G S R++V P E A+N
Sbjct: 212 LPLDSELYRSNWDLSSQRAVSVAQEMEKVKGFSHQRLRVLGVADTEPLGPNDTERQRARN 271
Query: 147 RRAIVFLK 154
RR + +
Sbjct: 272 RRVEISIM 279
>gi|222149694|ref|YP_002550651.1| hypothetical protein Avi_3670 [Agrobacterium vitis S4]
gi|221736676|gb|ACM37639.1| flagellar motor protein [Agrobacterium vitis S4]
Length = 343
Score = 70.2 bits (170), Expect = 8e-11, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 46/119 (38%), Gaps = 13/119 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGS--------WLEKHDCDFLIEGHADELG-----S 94
V F + + P + + L + + ++GH D +
Sbjct: 222 FQSEVLFPSGGADMNPQGQEEMVKLANALIDLAKEIPPDINWVLRVDGHTDNVQLSGNGR 281
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ AL RA +V + +++G+ A R+ +G+ P G +A A+NRR + L
Sbjct: 282 YPDNWALSAARAVSVVKFLISKGVPADRLAAAGFGEFQPIAPGDTPEARAQNRRIELKL 340
>gi|167576592|ref|ZP_02369466.1| hypothetical protein BthaT_00570 [Burkholderia thailandensis TXDOH]
Length = 433
Score = 70.2 bits (170), Expect = 8e-11, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 5/123 (4%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+ GDS+F + + P VL + + + + GH+D
Sbjct: 310 TVDEDDTRSVVVFRGDSMFR-SGESRVLPEIEPVLDKVAREVARVGGRVTVTGHSDNQPI 368
Query: 95 RNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
R + I L +RA V V RG A ++ G P ++NRR
Sbjct: 369 RRADIPNNLVLSEKRAAYVAQILVQRGTPADHIRSEGRGDAQPVAENTTPAGRSRNRRVE 428
Query: 151 VFL 153
+ +
Sbjct: 429 IAV 431
>gi|241663269|ref|YP_002981629.1| type VI secretion system OmpA/MotB family protein [Ralstonia
pickettii 12D]
gi|240865296|gb|ACS62957.1| type VI secretion system OmpA/MotB family protein [Ralstonia
pickettii 12D]
Length = 415
Score = 70.2 bits (170), Expect = 8e-11, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 39/113 (34%), Gaps = 4/113 (3%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIA---- 100
+ + F + +L + S + K + GH+D + +
Sbjct: 301 AVTFRGDDMFAGGRADVNAKVQPLLDKIASEITKVPGKVTVTGHSDNQPIKTAKFPSNQV 360
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA V Y +RG++ R++ G P + A NRR + +
Sbjct: 361 LSEERAVHVSEYLASRGVAQGRLEAVGKGDTEPVADNSTWNGRAANRRVQIDV 413
>gi|329296508|ref|ZP_08253844.1| outer membrane protein A [Plautia stali symbiont]
Length = 356
Score = 70.2 bits (170), Expect = 8e-11, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F + +++P Q L L S ++ D ++ G D +GS + L
Sbjct: 226 TLKSDVLFTFNKSTLKPEGQQALDQLYSQLSSMDPKDGSVVVLGFTDRIGSDQYNQKLSE 285
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLK 154
+RA +V +Y V++GI A+++ G+ P A +RR + +K
Sbjct: 286 KRAQSVVDYLVSKGIPANKISARGMGESNPVTGNTCDSVKGRNALIDCLAPDRRVEIDVK 345
Query: 155 GCR 157
G +
Sbjct: 346 GIK 348
>gi|117919364|ref|YP_868556.1| OmpA/MotB domain-containing protein [Shewanella sp. ANA-3]
gi|117611696|gb|ABK47150.1| OmpA/MotB domain protein [Shewanella sp. ANA-3]
Length = 485
Score = 70.2 bits (170), Expect = 8e-11, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 48/122 (39%), Gaps = 2/122 (1%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRN 96
+ Q + + + FD S + P VL L S+ + F + GH D+ G R+
Sbjct: 363 TDAISQTGKATLEGLLFDYDSERMLPESKPVLEVLASYLKQNPKLSFYVVGHTDDKGERS 422
Query: 97 SSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+ +L RRA AV S ++ G+ P ++ NRR + L+
Sbjct: 423 YNQSLSERRAAAVIKQLSDGFKIPSAQLTAHGNGEYSPVASNTNDAGQKLNRRVELVLRS 482
Query: 156 CR 157
+
Sbjct: 483 DK 484
>gi|309782503|ref|ZP_07677227.1| OmpA domain protein [Ralstonia sp. 5_7_47FAA]
gi|308918840|gb|EFP64513.1| OmpA domain protein [Ralstonia sp. 5_7_47FAA]
Length = 415
Score = 70.2 bits (170), Expect = 8e-11, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 39/113 (34%), Gaps = 4/113 (3%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIA---- 100
+ + F + +L + S + K + GH+D + +
Sbjct: 301 AVTFRGDDMFAGGRADVNAKVQPLLDKIASEITKVPGKVTVTGHSDNQPIKTAKFPSNQV 360
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA V Y +RG++ R++ G P + A NRR + +
Sbjct: 361 LSEERAVHVSEYLASRGVAQGRLEAVGKGDTEPVADNSTWNGRAANRRVQIDV 413
>gi|167905004|ref|ZP_02492209.1| OmpA family protein [Burkholderia pseudomallei NCTC 13177]
Length = 524
Score = 70.2 bits (170), Expect = 8e-11, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 45/123 (36%), Gaps = 2/123 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHAD 90
+ +S + + F + P Q + + LI GHAD
Sbjct: 387 DTVLDSPRAASIAMQLDTVSLFAAGKATFSPGAAQRELQHALRMILANPEQRVLIVGHAD 446
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS ++ L RA A+ ++FV +G+ +R V G P A+NRR
Sbjct: 447 SSGSDAANFQLSEARARAIRDWFVDQGVLKTRFIVQGAGDTHPIADNDSSSGRAQNRRVE 506
Query: 151 VFL 153
V L
Sbjct: 507 VLL 509
>gi|149185618|ref|ZP_01863934.1| hypothetical protein ED21_21374 [Erythrobacter sp. SD-21]
gi|148830838|gb|EDL49273.1| hypothetical protein ED21_21374 [Erythrobacter sp. SD-21]
Length = 162
Score = 70.2 bits (170), Expect = 8e-11, Method: Composition-based stats.
Identities = 48/108 (44%), Positives = 63/108 (58%), Gaps = 1/108 (0%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIAL 101
Q V+FDT Y+I D L + + + +F IEGHADE G+R ++AL
Sbjct: 49 QAVGQANTVVYFDTDRYNIDAEDSAKLQTQAQYFSQYPNVNFTIEGHADERGTREYNLAL 108
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
G RRA A NY V+ GI ASR++ SYGKE P G +E A+A+NRRA
Sbjct: 109 GERRANAAKNYLVSLGIPASRIRTISYGKERPVALGSNEAAWAQNRRA 156
>gi|283784777|ref|YP_003364642.1| outer membrane protein A [Citrobacter rodentium ICC168]
gi|282948231|emb|CBG87798.1| outer membrane protein A [Citrobacter rodentium ICC168]
Length = 351
Score = 70.2 bits (170), Expect = 8e-11, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L + S L + D ++ G D +GS + L
Sbjct: 221 TLKSDVLFNFNKATLKPEGQQALDQMYSQLSNLDPKDGSVVVLGFTDRIGSDTYNQGLSE 280
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
+RA +V +Y +++GI A ++ G+ P + A A +RR + +K
Sbjct: 281 KRAQSVVDYLISKGIPADKISARGMGESNPVTGSTCDNVKARAALIDCLAPDRRVEIEVK 340
Query: 155 GCR 157
G +
Sbjct: 341 GVK 343
>gi|189468503|ref|ZP_03017288.1| hypothetical protein BACINT_04906 [Bacteroides intestinalis DSM
17393]
gi|189436767|gb|EDV05752.1| hypothetical protein BACINT_04906 [Bacteroides intestinalis DSM
17393]
Length = 299
Score = 70.2 bits (170), Expect = 8e-11, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 6/114 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHAD----ELGSRNSSIA 100
S+ D++ + + SY I + LS + + + D + L+EG+ D + ++
Sbjct: 162 ISLADNMLYKSGSYEINERAGETLSKIAKIITDYKDYEVLVEGNTDNVPISRPNIRNNWD 221
Query: 101 LGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V + + R+ G+ P E +NRR + +
Sbjct: 222 LSALRASSVVQALQNQYGVDPKRLSAAGRGEYNPLTDNDTELGKQRNRRTQIII 275
>gi|88860422|ref|ZP_01135060.1| putative Component of sodium-driven polar flagellar motor
[Pseudoalteromonas tunicata D2]
gi|88817620|gb|EAR27437.1| putative Component of sodium-driven polar flagellar motor
[Pseudoalteromonas tunicata D2]
Length = 290
Score = 70.2 bits (170), Expect = 8e-11, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 41/102 (40%), Gaps = 2/102 (1%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNSSIALGLRRAYAVFN 111
+ +S + + L +G +L+ LI + D G R ++ L +RA +
Sbjct: 186 YQKNSSELTKESKKRLDKIGEYLKNDPNIESVLISAYTDSYGGRYTNDELSKKRALTIKT 245
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
Y G+ R++V +G++ NRR ++ +
Sbjct: 246 YMTELGVEDKRVEVEGFGEKRHIAPNTTILGRQLNRRVVIQI 287
>gi|113969260|ref|YP_733053.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-4]
gi|113883944|gb|ABI37996.1| OmpA/MotB domain protein [Shewanella sp. MR-4]
Length = 485
Score = 70.2 bits (170), Expect = 8e-11, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 48/122 (39%), Gaps = 2/122 (1%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRN 96
+ Q + + + FD S + P VL L S+ + F + GH D+ G R+
Sbjct: 363 TDAISQTGKATLEGLLFDYDSERMLPESKPVLEVLASYLKQNPTLSFYVVGHTDDKGERS 422
Query: 97 SSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+ +L RRA AV S ++ G+ P ++ NRR + L+
Sbjct: 423 YNQSLSERRAAAVIKQLSDGFKIPSAQLTAHGNGEYSPVASNTNDAGQKLNRRVELVLRS 482
Query: 156 CR 157
+
Sbjct: 483 DK 484
>gi|126173146|ref|YP_001049295.1| OmpA/MotB domain-containing protein [Shewanella baltica OS155]
gi|125996351|gb|ABN60426.1| OmpA/MotB domain protein [Shewanella baltica OS155]
Length = 485
Score = 70.2 bits (170), Expect = 9e-11, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 2/122 (1%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRN 96
+ Q + + + FD S + P VL L S+L++H F + H D+ G R+
Sbjct: 363 TDAISQTGKATLEGLLFDYDSERMLPESKPVLEVLASYLKQHPTLSFYVVEHTDDKGERS 422
Query: 97 SSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+ +L RRA AV S ++ G+ P ++ NRR + L+
Sbjct: 423 YNQSLSERRAAAVIKQLSDGFQIPSAQLTAHGNGEYSPVASNTNDAGQKLNRRVELVLRS 482
Query: 156 CR 157
+
Sbjct: 483 DK 484
>gi|83642951|ref|YP_431386.1| flagellar motor protein [Hahella chejuensis KCTC 2396]
gi|83630994|gb|ABC26961.1| Flagellar motor protein [Hahella chejuensis KCTC 2396]
Length = 275
Score = 70.2 bits (170), Expect = 9e-11, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 47/121 (38%), Gaps = 5/121 (4%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RN 96
+ S + F + S ++ + VL + L D L+ GH D+
Sbjct: 150 DKGVVLSFTERATFASGSEELKLYMLPVLMKVTDVLADCKGDILVTGHTDDRPIDSVKFR 209
Query: 97 SSIALGLRRAYAVFNYFV-ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
S+ L RA +V + V + ASR+ + P V ++ A+NRR + ++
Sbjct: 210 SNWDLSAARAVSVVHRLVLDGRLDASRVSAIGQAETRPLVPNDTDEHRAQNRRVEIHIEN 269
Query: 156 C 156
Sbjct: 270 A 270
>gi|53715977|ref|YP_106445.1| hypothetical protein BMAA1914 [Burkholderia mallei ATCC 23344]
gi|52421947|gb|AAU45517.1| OmpA domain protein [Burkholderia mallei ATCC 23344]
Length = 426
Score = 70.2 bits (170), Expect = 9e-11, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 43/127 (33%), Gaps = 4/127 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
L+ + S + F + + PA ++ + + + + + G+ D
Sbjct: 298 AAGTLSVEENARRSSVTFRGDAMFAPGAAGVNPAMGPLIRKIAAEIARVPGKVTVRGYTD 357
Query: 91 ELGSRNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
++ A L RA V + G+ ASR++ G P A N
Sbjct: 358 NQPIKSRQFASNEALSEERATQVMQMLQSAGVPASRLEALGKGGAEPIGDNRTPQGRALN 417
Query: 147 RRAIVFL 153
RR + +
Sbjct: 418 RRVEITV 424
>gi|307718609|ref|YP_003874141.1| hypothetical protein STHERM_c09210 [Spirochaeta thermophila DSM
6192]
gi|306532334|gb|ADN01868.1| hypothetical protein STHERM_c09210 [Spirochaeta thermophila DSM
6192]
Length = 243
Score = 70.2 bits (170), Expect = 9e-11, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 47/131 (35%), Gaps = 9/131 (6%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV----LSNLGSWLEKHDCDFLIEG 87
+ + ++ FF ++S + + LSNL + E IEG
Sbjct: 107 AKTVRVKQDERGLVITLAADAFFRSASAELNIEAARETLIKLSNLLTSPELEGRKIRIEG 166
Query: 88 HADELGS-----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
H D++ + S+ L RA V ++ G+ + +V +P +
Sbjct: 167 HTDDVPTDPAGPWPSNWELSSARAINVLHFLSDYGVDENHFQVMGLADTVPLADNSTPEG 226
Query: 143 YAKNRRAIVFL 153
A NRR + +
Sbjct: 227 RAYNRRIDIVI 237
>gi|116878566|ref|YP_357384.2| chemotaxis protein MotB [Pelobacter carbinolicus DSM 2380]
gi|114843202|gb|ABA89214.2| chemotaxis protein MotB [Pelobacter carbinolicus DSM 2380]
Length = 299
Score = 70.2 bits (170), Expect = 9e-11, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 9/132 (6%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGS-- 94
S LQ + + ++ + + FD+ I+PA + +L +G+ L+ D +EGH D +
Sbjct: 166 SDLQGRLTVNMVEKILFDSGKADIKPAGLNILKRIGTILKNTADKSIRVEGHTDNVPISP 225
Query: 95 -----RNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
S+ L RA +V ++ R + R+ V +G MP A+NRR
Sbjct: 226 RLKDIYRSNWELSTARAGSVVHFLQDRLGISGERLSVCGFGPYMPIASNATAQGRAQNRR 285
Query: 149 AIVFLKGCRANT 160
+ L + T
Sbjct: 286 IQIVLVPQQTQT 297
>gi|291276673|ref|YP_003516445.1| peptidoglycan associated lipoprotein [Helicobacter mustelae 12198]
gi|290963867|emb|CBG39703.1| peptidoglycan associated lipoprotein (omp18) [Helicobacter mustelae
12198]
Length = 169
Score = 70.2 bits (170), Expect = 9e-11, Method: Composition-based stats.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 19/168 (11%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---------- 50
M+ I L ++ + G + I V E ++ + +
Sbjct: 1 MKKVFFLIFL----VLFVVGCAKKEVAIDEAPKVQQEEEPVQENVAKAPEPKKKDILQDG 56
Query: 51 ----SVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRR 105
SV+F Y+I P+ V+ + + E D + ++EG+ DE GS + AL +R
Sbjct: 57 TVVGSVYFAYDQYNIPPSMSDVIDSSVEKINENPDMNVVVEGNTDEFGSDEYNFALSNKR 116
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
A AV + + RGIS +++ + S GK P E+ Y KNRR + L
Sbjct: 117 AMAVQSALITRGISKNKISILSLGKTKPVCTEKREECYQKNRRGDIRL 164
>gi|34556728|ref|NP_906543.1| motility protein MotB [Wolinella succinogenes DSM 1740]
gi|34482442|emb|CAE09443.1| MOTB PROTEIN [Wolinella succinogenes]
Length = 255
Score = 70.2 bits (170), Expect = 9e-11, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 46/130 (35%), Gaps = 8/130 (6%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVL---SNLGSWLEKHDCDFLIE 86
S + ++ F S+ + F++ S +I + + + L +D +
Sbjct: 106 SDGPAVKMEEAEDGFILSIPSELLFESGSATITNKEGILFLKRTALEINKLSNDMHIKVI 165
Query: 87 GHADELG-----SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
GH D + + L + R V + ++ +R+ G+ P +
Sbjct: 166 GHTDNDRLRPTATYKDNWELSIARGVNVAKMLLEERVNPARISAGGNGEFDPVASNATPE 225
Query: 142 AYAKNRRAIV 151
AKNRR +
Sbjct: 226 GKAKNRRVDL 235
>gi|239995434|ref|ZP_04715958.1| sodium-type flagellar protein MotY [Alteromonas macleodii ATCC
27126]
Length = 118
Score = 70.2 bits (170), Expect = 9e-11, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYAVFN 111
+ +S + + L+ +G +L++ L++G+ D G R ++ L +RRA V +
Sbjct: 14 YQNNSTELTKYSQKRLTMIGEYLKEDGELELVLLDGYTDSYGGRYNNEQLSIRRANEVKS 73
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
Y G+ R+++T +G++ ++ A+NRR +V L
Sbjct: 74 YLTTLGVPEDRIQLTGHGEKRHIAPNDTRESRAQNRRVVVRLS 116
>gi|117619885|ref|YP_856319.1| flagellar motor protein MotB [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117561292|gb|ABK38240.1| chemotaxis protein MotB [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 291
Score = 70.2 bits (170), Expect = 9e-11, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 46/129 (35%), Gaps = 5/129 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
L L Q +G+ F S ++P I +++ + L ++ GH D +
Sbjct: 153 LEVEQLGSQLVIRIGEKALFPADSAFLQPQFIPLVNKISGILADIPGKVVVTGHTDNSQA 212
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
S+ L + R+ ++ + + A+R+ P + NRR
Sbjct: 213 PVELYRSNWELSVLRSASIVHTLLTNPKLDATRVIAQGVADAQPRYPNDTPEHRQANRRV 272
Query: 150 IVFLKGCRA 158
+ L +A
Sbjct: 273 EITLSQGKA 281
>gi|313681313|ref|YP_004059051.1| ompa/motb domain protein [Sulfuricurvum kujiense DSM 16994]
gi|313154173|gb|ADR32851.1| OmpA/MotB domain protein [Sulfuricurvum kujiense DSM 16994]
Length = 367
Score = 70.2 bits (170), Expect = 9e-11, Method: Composition-based stats.
Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F T S + ++ S+L++ I GH D S + L +RA V +
Sbjct: 265 FATDSTKVDAEGAAKVAEFASFLKESPAYKANIVGHTDSTASDAYNQKLSEKRAAKVKSM 324
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ G+ +SR+ G++MP ++ A+NRR V L
Sbjct: 325 LIEDGVDSSRLTSEGMGEKMPIASNKTKEGRAENRRIEVEL 365
>gi|254467608|ref|ZP_05081017.1| OmpA family protein [Rhodobacterales bacterium Y4I]
gi|206684356|gb|EDZ44840.1| OmpA family protein [Rhodobacterales bacterium Y4I]
Length = 474
Score = 70.2 bits (170), Expect = 9e-11, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 40/114 (35%), Gaps = 4/114 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ S F + S + A ++ + L ++ GH+D + S++
Sbjct: 355 LIIRLTGSGMFGSGSDQLSKAFRNPVNRVAEALNDEKGKIIVAGHSDNVPIRSSRFPSNM 414
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AL L RA +V R+ + P D AKNRR + L
Sbjct: 415 ALSLARAKSVMAGMANVMTDPDRLSAEGRADKEPIADNSTRDGRAKNRRIEILL 468
>gi|94499177|ref|ZP_01305715.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Oceanobacter sp. RED65]
gi|94428809|gb|EAT13781.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Oceanobacter sp. RED65]
Length = 294
Score = 70.2 bits (170), Expect = 9e-11, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHD--CDFLIEGHADELGSRNSSIALGLRRAYA 108
VFF ++ + L + +++ I+GH+D LG R ++ L RA
Sbjct: 177 KVFFPGGGAALDKQARKKLDLIALYVKADPEVQAIYIDGHSDALGRRYNNRRLSEDRALK 236
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
V Y + RG+ A + +G+ P A+NRR + L+
Sbjct: 237 VNEYLIERGLDAEIITTRYHGERYPVASNATAAGRAQNRRVTIRLE 282
>gi|110639902|ref|YP_680112.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
gi|110282583|gb|ABG60769.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
Length = 505
Score = 70.2 bits (170), Expect = 9e-11, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADELGSRNSSIALGLRRA 106
+ +V F+ +SY + + + L L + + ++ + + GH D +GS ++ L R
Sbjct: 396 LLHNVLFERTSYELLSSSLPALDQLVTVMNQYPGMIIELSGHTDNVGSAKKNMELSKNRV 455
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ Y V++GISA R+K YG + P E NRR + +
Sbjct: 456 ESAKKYLVSKGISADRIKSVGYGSKYPVASNDGEQTRKYNRRVELRI 502
>gi|327393374|dbj|BAK10796.1| outer membrane protein A precursor OmpA [Pantoea ananatis AJ13355]
Length = 363
Score = 70.2 bits (170), Expect = 9e-11, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 59/145 (40%), Gaps = 12/145 (8%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDC 81
D +P + + + ++ V F + +++P Q L L S ++ D
Sbjct: 211 DVAAPAPAPAPAPAPVVQTKRFTLKSDVLFTFNKSTLKPEGQQALDQLYSQLSSMDPKDG 270
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHD 139
++ G D +GS + L +RA +V +Y V++GI A+++ G+ P
Sbjct: 271 SVVVLGFTDRIGSEQYNQKLSEKRAQSVVDYLVSKGIPANKISARGMGESNPVTGNTCDS 330
Query: 140 EDAY-------AKNRRAIVFLKGCR 157
A +RR + +KG +
Sbjct: 331 VKGRKALIDCLAPDRRVEIDVKGIK 355
>gi|260591686|ref|ZP_05857144.1| OmpA family protein [Prevotella veroralis F0319]
gi|260536329|gb|EEX18946.1| OmpA family protein [Prevotella veroralis F0319]
Length = 288
Score = 70.2 bits (170), Expect = 9e-11, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 44/119 (36%), Gaps = 11/119 (9%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWL----------EKHDCDFLIEGHADELGSR 95
S+ D++ + + SY I Q LS + + E + + I D++ +
Sbjct: 149 ISLADNMLYKSGSYEINDRAEQTLSKIAKIITDYSDYDVLIEGNTDNVPINTANDKMKNI 208
Query: 96 NSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L RA +V Y + R+ G+ P E +NRR + +
Sbjct: 209 RNNWDLSCLRAASVVQYLQDHFNVNPKRLTAGGRGEYNPLATNDTELGKQRNRRTQIII 267
>gi|91227007|ref|ZP_01261544.1| putative protein F-related protein [Vibrio alginolyticus 12G01]
gi|91188809|gb|EAS75095.1| putative protein F-related protein [Vibrio alginolyticus 12G01]
Length = 224
Score = 70.2 bits (170), Expect = 9e-11, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 1/111 (0%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALG 102
+ + V F T S + + N+G +L + D D +I+GHAD G+ + + L
Sbjct: 110 LMIRLKEQVHFQTGSARLSAQSQDWIRNIGHYLAGRTDVDVVIDGHADSTGAESFNDTLS 169
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+RA V +A I R+ +G+ +P A NRR + L
Sbjct: 170 EKRAREVEKQLLATSIPRQRVFSRGFGEYVPKCSNATASGKACNRRVELTL 220
>gi|326424248|ref|NP_762484.2| protein F-like protein [Vibrio vulnificus CMCP6]
gi|319999634|gb|AAO07474.2| Protein F-related protein [Vibrio vulnificus CMCP6]
Length = 198
Score = 70.2 bits (170), Expect = 9e-11, Method: Composition-based stats.
Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIA 100
+ + +++ F T S + P + + LG++ ++ D D +I+GHAD G+ + +
Sbjct: 82 DHIMIHLTETIHFKTGSAEVSPVSARWIGLLGNYLNQRSDVDIVIDGHADSTGTTGFNNS 141
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RRA V + + SR+ YG+ +P+ + NRR + L
Sbjct: 142 LSERRAEEVKKQLLMSRVPESRVYTRGYGEYLPACSNTSINGRKCNRRVELML 194
>gi|152971453|ref|YP_001336562.1| putative outer membrane lipoprotein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|150956302|gb|ABR78332.1| iron-regulated membrane protein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
Length = 127
Score = 70.2 bits (170), Expect = 9e-11, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 50/119 (42%), Gaps = 2/119 (1%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF-LIEGHADELGSRN 96
+ +S + DS+ FD + Y +RP Q ++ + S L +EGH D G +
Sbjct: 7 TESNGDWSLGLSDSILFDKNDYRLRPDSRQQITTMASRLAATGITHSRLEGHTDNYGEDS 66
Query: 97 SSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ AL L+RA +V + + + GK+ P A+NRR V +
Sbjct: 67 YNEALSLKRANSVADAWAEGAHVPRSNLVTRGLGKKYPIASNDTAAGRAENRRVTVVIS 125
>gi|37528060|ref|NP_931405.1| hypothetical protein plu4224 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36787497|emb|CAE16596.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 558
Score = 70.2 bits (170), Expect = 9e-11, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 49/129 (37%), Gaps = 4/129 (3%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIE 86
+SSP + + L + ++ FD ++P +VL N L K + +I
Sbjct: 419 VSSPPVLKSGKPLPQTL--NLSSMSLFDVGQSRLKPEAAKVLVNALIEIKAKPEWMVVIT 476
Query: 87 GHADELGSRNSSIALGLRRAYAVFNY-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
GH D G + L L RA AV ++ +S + V G P A
Sbjct: 477 GHTDSTGDAVKNRELSLARAKAVRDWILQTSDVSPTCFVVKGEGATQPIATNTTAVGRAV 536
Query: 146 NRRAIVFLK 154
NRR + L
Sbjct: 537 NRRVEISLM 545
>gi|15618690|ref|NP_224976.1| peptidoglycan-associated lipoprotein [Chlamydophila pneumoniae
CWL029]
gi|15836314|ref|NP_300838.1| peptidoglycan-associated lipoprotein [Chlamydophila pneumoniae
J138]
gi|16752260|ref|NP_445628.1| peptidoglycan-associated lipoprotein [Chlamydophila pneumoniae
AR39]
gi|33242140|ref|NP_877081.1| peptidoglycan-associated lipoprotein precursor [Chlamydophila
pneumoniae TW-183]
gi|4377090|gb|AAD18919.1| Peptidoglycan-Associated Lipoprotein [Chlamydophila pneumoniae
CWL029]
gi|7190005|gb|AAF38862.1| peptidoglycan-associated lipoprotein [Chlamydophila pneumoniae
AR39]
gi|8979154|dbj|BAA98989.1| peptidoglycan-associated lipoprotein [Chlamydophila pneumoniae
J138]
gi|33236650|gb|AAP98738.1| peptidoglycan-associated lipoprotein precursor [Chlamydophila
pneumoniae TW-183]
Length = 192
Score = 70.2 bits (170), Expect = 9e-11, Method: Composition-based stats.
Identities = 41/106 (38%), Positives = 64/106 (60%), Gaps = 2/106 (1%)
Query: 50 DSVFFDTSSYSIRPADI-QVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAY 107
++ F T SY+I+ + +L+NL +++K+ IEGH DE G+ + ++ALG RRA
Sbjct: 84 RNITFATDSYTIKGEENLAILTNLVHYMKKNPKATLYIEGHTDERGAASYNLALGARRAN 143
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
A+ + +GISA R+ SYGKE P GH+E A+ +NRR +
Sbjct: 144 AIKEHLRKQGISADRLSTISYGKEHPLNSGHNELAWQQNRRTEFKI 189
>gi|325068011|ref|ZP_08126684.1| OmpA/MotB domain protein [Actinomyces oris K20]
Length = 499
Score = 70.2 bits (170), Expect = 9e-11, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 51/138 (36%), Gaps = 3/138 (2%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+++ ++ + D + + + + ++ V F + S + L + L
Sbjct: 174 ALAAPVPIERYTKALDDSTSTHAGGKDITVTLASDVTFASDSADLASGAEAQLQTVAGQL 233
Query: 77 EKHDC--DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMP 133
++ I GH D++ + L +RA AV + V+ G+ P
Sbjct: 234 AQYPNGGTLSIVGHTDDVQDDAYNQTLSEKRANAVKTRLEQLTKLDKWQTSVSGKGESQP 293
Query: 134 SVYGHDEDAYAKNRRAIV 151
+ ++A A NRR +
Sbjct: 294 KINDTTDEARAVNRRVEI 311
>gi|323258027|gb|EGA41706.1| hypothetical protein SEEM8283_04036 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
Length = 418
Score = 70.2 bits (170), Expect = 9e-11, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 40/123 (32%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
L + F ++ A V++ + + + GH D
Sbjct: 294 LTVDEDDQHSRVVFRGDAMFVPGQKTVSDAIRPVINKAAREIARVGGAVTVTGHTDSQPI 353
Query: 95 RNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
++ L +RA V + G+ A R+ + G +P + AKNRR
Sbjct: 354 HSAEFPSNLVLSEKRAAEVAALLTSGGVPAGRVHIVGKGDTVPVADNDSKAGRAKNRRVE 413
Query: 151 VFL 153
+ +
Sbjct: 414 ILV 416
>gi|29840731|ref|NP_829837.1| peptidoglycan-associated lipoprotein [Chlamydophila caviae GPIC]
gi|29835081|gb|AAP05715.1| peptidoglycan-associated lipoprotein [Chlamydophila caviae GPIC]
Length = 191
Score = 70.2 bits (170), Expect = 9e-11, Method: Composition-based stats.
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Query: 50 DSVFFDTSSYSIRPADIQVLSN--LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++ F T SY+I+ + + + + + IEGH DE G+ ++ALG RRA
Sbjct: 83 RNITFATDSYTIKGEENLAILSSLVRQMQKSPKTTLYIEGHTDERGAAAYNLALGARRAN 142
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV + + +GISA R+ SYGKE P GH+E A+ +NRR +
Sbjct: 143 AVKQHLIKQGISADRLFTISYGKEQPVNSGHNELAWQQNRRTEFKV 188
>gi|260219497|emb|CBA26342.1| Peptidoglycan-associated lipoprotein [Curvibacter putative symbiont
of Hydra magnipapillata]
Length = 167
Score = 70.2 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Query: 16 MSISGI-DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
+ +G D S+ TV + + Q+ S+ +V+FD S+ IR L
Sbjct: 27 SAATGTNDGAGVAKSNVATVTLDKNAQDPALSAALKTVYFDYDSFVIRSEFQATLEAHAK 86
Query: 75 WLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
+L+ IEGH DE G R ++ALG +RA AV +G+S ++M+ SYGKE P
Sbjct: 87 YLKADKSRKVSIEGHTDERGGREYNLALGQKRAEAVRKALQLQGVSDAQMEAISYGKEKP 146
Query: 134 SVYGHDEDAYAKNRRAIV 151
+V G+ E A KNRRA
Sbjct: 147 AVLGNSEAALEKNRRAEF 164
>gi|237730913|ref|ZP_04561394.1| outer membrane protein A [Citrobacter sp. 30_2]
gi|226906452|gb|EEH92370.1| outer membrane protein A [Citrobacter sp. 30_2]
Length = 356
Score = 70.2 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L + S L + D ++ G D +GS + L
Sbjct: 226 TLKSDVLFNFNKATLKPEGQQALDQMYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSE 285
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
+RA +V +Y +++GI + ++ G+ P + A A +RR + +K
Sbjct: 286 KRAQSVVDYLISKGIPSDKISARGMGESNPVTGNTCDNVKARAALIDCLAPDRRVEIEVK 345
Query: 155 GCR 157
G +
Sbjct: 346 GIK 348
>gi|326800605|ref|YP_004318424.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
gi|326551369|gb|ADZ79754.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
Length = 441
Score = 70.2 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 37/103 (35%), Gaps = 2/103 (1%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+ F T +I P VL + S E + GH D +G S+ L RRA AV
Sbjct: 336 ILFSTGQATILPESEGVLKFIASILAEDQAAKIQVVGHTDAVGDDKSNQILSERRAEAVK 395
Query: 111 NYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
R A ++ + G+ P +NRR
Sbjct: 396 RALTTRYGIAEISLQTSGKGESEPVADNQTVKGRTRNRRVEFI 438
>gi|323225691|gb|EGA09915.1| hypothetical protein SEEM0055_14308 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
Length = 324
Score = 70.2 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 40/123 (32%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
L + F ++ A V++ + + + GH D
Sbjct: 200 LTVDEDDQHSRVVFRGDAMFVPGQKTVSDAIRPVINKAAREIARVGGAVTVTGHTDSQPI 259
Query: 95 RNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
++ L +RA V + G+ A R+ + G +P + AKNRR
Sbjct: 260 HSAEFPSNLVLSEKRAAEVAALLTSGGVPAGRVHIVGKGDTVPVADNDSKAGRAKNRRVE 319
Query: 151 VFL 153
+ +
Sbjct: 320 ILV 322
>gi|254785076|ref|YP_003072504.1| outer membrane protein and related peptidoglycan-associated
[Teredinibacter turnerae T7901]
gi|237687207|gb|ACR14471.1| putative outer membrane protein and related
peptidoglycan-associated [Teredinibacter turnerae T7901]
Length = 472
Score = 70.2 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 49/124 (39%), Gaps = 10/124 (8%)
Query: 41 QEQFSSSVGDSVF-------FDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADEL 92
E S GD+V FD S + ++ +L + + + ++EGH D
Sbjct: 345 DEAMVLSQGDNVLIRMVGLNFDPGSAQVNASNYALLQKVEQAVRMYPGYTVVVEGHTDSF 404
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGIS--ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS ++ L RA AV Y + A ++ YG+ P + +NRR
Sbjct: 405 GSTQANQTLSEDRANAVRQYLLVNMNDLAAGAIEAYGYGESQPIANNETREGRKRNRRID 464
Query: 151 VFLK 154
V LK
Sbjct: 465 VLLK 468
>gi|291286065|ref|YP_003502881.1| type I secretion outer membrane protein, TolC family [Denitrovibrio
acetiphilus DSM 12809]
gi|290883225|gb|ADD66925.1| type I secretion outer membrane protein, TolC family [Denitrovibrio
acetiphilus DSM 12809]
Length = 666
Score = 70.2 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 1/104 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAV 109
++ F +S + V+ + + L+ + I GH D G+ + L RA +V
Sbjct: 556 NILFKLNSSKLTKDSYPVVDAIAAKLKTMEGYTLQIVGHTDSSGNAEFNKKLSAERAKSV 615
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+N V +G+ + G+E+P D KNRR L
Sbjct: 616 YNRLVRKGVPKENITTYGKGEELPLYSNATRDGRVKNRRIEFKL 659
>gi|116249829|ref|YP_765667.1| hypothetical protein RL0063 [Rhizobium leguminosarum bv. viciae
3841]
gi|115254477|emb|CAK05551.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 418
Score = 70.2 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 42/100 (42%), Gaps = 1/100 (1%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F +++P +L ++ + L+ I GH D G+ ++ L L RA A+
Sbjct: 81 FGVGKSTLQPGAETLLDDIATALKNFPDWSLRIVGHTDASGNAETNERLSLERANAIKAA 140
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
V RG++ R+ G+ P + A NRR +
Sbjct: 141 LVERGVNTDRLLAAGAGQTRPIASNETAEGKALNRRVELV 180
>gi|310767218|gb|ADP12168.1| outer membrane protein A [Erwinia sp. Ejp617]
Length = 355
Score = 70.2 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 62/158 (39%), Gaps = 12/158 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
++ + +S D + + E ++ V F + +++P Q L
Sbjct: 190 SMLSVGVSYRFGQDDVAPVVAPAPAPAPVVETKRFTLKSDVLFTFNKANLKPEGQQALDQ 249
Query: 72 LGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L + L + D ++ G+ D +GS + L +RA +V +Y V++GI ++++
Sbjct: 250 LYTQLSNLDPKDGSVVVLGYTDRIGSEQYNQKLSEKRAQSVVDYLVSKGIPSNKISARGE 309
Query: 129 GKEMPS--VYGHDEDAYAK-------NRRAIVFLKGCR 157
G+ P +RR + +KG +
Sbjct: 310 GESNPVTGNTCDSVKGRQALIDCLSPDRRVEIQVKGIK 347
>gi|237756911|ref|ZP_04585384.1| putative OmpA/MotB domain protein [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237690932|gb|EEP60067.1| putative OmpA/MotB domain protein [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 260
Score = 70.2 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 4/133 (3%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD- 80
+ LDT + + S + + F ++S I+ + L+ + +L+ H
Sbjct: 126 EKLDTGVKEKEAPKTYKSTD---AIIQPVRIHFYSNSSKIKKEYLPYLNVVAKYLKTHPD 182
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
I+G+ D +GS+ + L L+RA AV Y + G+S +R+ + GK V ++E
Sbjct: 183 VKVKIKGYTDNIGSKKYNDKLALKRAEAVKQYLIKLGVSPNRIMIDGVGKSEYIVSNNNE 242
Query: 141 DAYAKNRRAIVFL 153
NRRA ++
Sbjct: 243 LDRFTNRRAEFYI 255
>gi|227536324|ref|ZP_03966373.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Sphingobacterium spiritivorum ATCC 33300]
gi|227243821|gb|EEI93836.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Sphingobacterium spiritivorum ATCC 33300]
Length = 650
Score = 70.2 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 53/122 (43%), Gaps = 6/122 (4%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRN 96
+ E+ +S V +++++D Y+IR +L+ L + + + H D +
Sbjct: 526 QPVIEKGTSFVLENIYYDLDKYNIREDAKPILNQLVRTMRDNPTLKIELSSHTDSRATAK 585
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD-----EDAYAKNRRAIV 151
++ L RA A +Y V+RGI+ R+ YG+ D + + NRR +
Sbjct: 586 YNMKLSQNRAQAAVDYIVSRGIARDRIVAKGYGESKLVNKCADGVKCSDAEHQANRRTEI 645
Query: 152 FL 153
+
Sbjct: 646 KV 647
>gi|86138055|ref|ZP_01056630.1| hypothetical protein MED193_00970 [Roseobacter sp. MED193]
gi|85825082|gb|EAQ45282.1| hypothetical protein MED193_00970 [Roseobacter sp. MED193]
Length = 477
Score = 70.2 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 42/114 (36%), Gaps = 4/114 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ S F + S + A ++ + L ++ GH+D + S++
Sbjct: 358 LIIRLAGSGMFGSGSDQLSKAFKTPVARVAEALNDEKGQVIVAGHSDNVPIRSSRFPSNM 417
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AL L RA +V + R+ ++ P + AKNRR + L
Sbjct: 418 ALSLARAKSVMSGMAQVFDDPDRLSAEGRAEKEPIADNGTKAGRAKNRRIEILL 471
>gi|307825895|ref|ZP_07656110.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
gi|307733014|gb|EFO03876.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
Length = 313
Score = 70.2 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 4/127 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ +N Q + D V F +S + + +L L L++ LIEGH D
Sbjct: 183 NKAVNIKVNQGYAQLEIQDKVLFKSSEADLTASGGALLKRLMPLLKQSVGLILIEGHTDN 242
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+ S+ LG RA +V ++ V + + +SR++ +Y MP + KNR
Sbjct: 243 IPIKTAQFPSNWELGASRATSVLHFLVLQQLDSSRLRAITYADTMPIADNSTPEGKEKNR 302
Query: 148 RAIVFLK 154
R + +K
Sbjct: 303 RVNILIK 309
>gi|291085616|ref|ZP_06353500.2| outer membrane protein A [Citrobacter youngae ATCC 29220]
gi|291070418|gb|EFE08527.1| outer membrane protein A [Citrobacter youngae ATCC 29220]
Length = 360
Score = 70.2 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L + S L + D ++ G D +GS + L
Sbjct: 230 TLKSDVLFNFNKATLKPEGQQALDQMYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSE 289
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
+RA +V +Y +++GI A ++ G+ P + A A +RR + +K
Sbjct: 290 KRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKARAALIDCLAPDRRVEIEVK 349
Query: 155 GCR 157
G +
Sbjct: 350 GIK 352
>gi|119774051|ref|YP_926791.1| OmpA/MotB [Shewanella amazonensis SB2B]
gi|119766551|gb|ABL99121.1| OmpA/MotB [Shewanella amazonensis SB2B]
Length = 368
Score = 70.2 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F +S I P+ + + L +++ +H I GHA +G+ + ++ L +RA A
Sbjct: 257 FANNSSVINPSSYESVEKLANYMNQHPGSTVEIGGHASNVGNPDYNMTLSEKRANAAAKL 316
Query: 113 FVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
V + ISA+R+ YG P + G+ +A+A NRR + G
Sbjct: 317 LVEKYGISANRVTAKGYGITRPVMDGNTAEAHAANRRVEAVVTGS 361
>gi|293605866|ref|ZP_06688236.1| OmpA family protein [Achromobacter piechaudii ATCC 43553]
gi|292815653|gb|EFF74764.1| OmpA family protein [Achromobacter piechaudii ATCC 43553]
Length = 216
Score = 70.2 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 51/117 (43%), Gaps = 10/117 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLS----NLGSWLEKHDCDFLIEGHADELG------SR 95
+ SV F +S ++P ++L L ++L+ HD ++ G+ D+
Sbjct: 85 IGISGSVLFALNSDQLQPEGREILKTLIEPLAAYLKTHDEILMVSGYTDDQQVREGNRRF 144
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ L +RA V + G+ ++ + ++G E P DE+ AKNRR +
Sbjct: 145 ADNWDLSAQRALTVTRALIDEGVPSATVFAAAFGSEQPVASNADEEGRAKNRRVEIT 201
>gi|300772832|ref|ZP_07082701.1| outer membrane protein [Sphingobacterium spiritivorum ATCC 33861]
gi|300759003|gb|EFK55830.1| outer membrane protein [Sphingobacterium spiritivorum ATCC 33861]
Length = 650
Score = 70.2 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRN 96
+ ++ V D++++D + IRP +VL L + + E + H D GS N
Sbjct: 526 QPVNKEGIVFVLDNIYYDFNKSDIRPDAAKVLDQLVNTMTENPTLQIELSSHTDSRGSDN 585
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH-----DEDAYAKNRRAIV 151
++ L RRA + +Y +++GI+ R+ YG+ E+ + NRR V
Sbjct: 586 YNMKLSDRRAKSAVDYIISKGIAKERLVSKGYGETRLVNECANGVKCTEEQHQANRRTEV 645
Query: 152 FL 153
+
Sbjct: 646 KV 647
>gi|332288152|ref|YP_004419004.1| outer membrane protein A [Gallibacterium anatis UMN179]
gi|330431048|gb|AEC16107.1| outer membrane protein A [Gallibacterium anatis UMN179]
Length = 361
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 54/144 (37%), Gaps = 13/144 (9%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLI 85
S + ++F+ + V F +++P Q L NL + K +
Sbjct: 217 GQSAAPAPVVEVVNKKFA--LSSDVLFAFGKANLKPEAAQSLDNLQQEITKVGSLSSVEV 274
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE----- 140
G+ D +GS + L RA V NY V++ IS +K YG+ P +
Sbjct: 275 AGYTDRIGSDKYNQKLSQERANTVANYLVSKSISPDVIKAVGYGEANPVTGNTCDAVKGR 334
Query: 141 ----DAYAKNRRAIVFLKGCRANT 160
A +RR V + G + T
Sbjct: 335 KALIACLAPDRRVEVSVSGQQQQT 358
>gi|269965067|ref|ZP_06179232.1| flagellar motor protein [Vibrio alginolyticus 40B]
gi|269830370|gb|EEZ84595.1| flagellar motor protein [Vibrio alginolyticus 40B]
Length = 315
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 46/128 (35%), Gaps = 5/128 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ +L +Q + + F S ++P ++ + ++ + GH D
Sbjct: 174 QGAIEVENLGQQIVIRMREKGAFPEGSAFLQPKFRPLVRQIAELVKDVPGIVRVSGHTDN 233
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S+ L +RA +V RG S R++V P + +D A N
Sbjct: 234 RPLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRLRVRGMADTEPLLPNDSDDNRALN 293
Query: 147 RRAIVFLK 154
RR + +
Sbjct: 294 RRVEISIM 301
>gi|320158835|ref|YP_004191213.1| protein F-related protein [Vibrio vulnificus MO6-24/O]
gi|319934147|gb|ADV89010.1| protein F-related protein [Vibrio vulnificus MO6-24/O]
Length = 200
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIA 100
+ + +++ F T S + P + + LG++ ++ D D +I+GHAD G+ + +
Sbjct: 84 DHIMIHLTETIHFKTGSAEVSPVSARWIGLLGNYLNQRSDVDIVIDGHADSTGTTGFNNS 143
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RRA V + + SR+ YG+ +P+ + NRR + L
Sbjct: 144 LSERRAEEVKKQLLMSRVPESRVYTRGYGEYLPACSNTSINGRKCNRRVELML 196
>gi|262375710|ref|ZP_06068942.1| type VI secretion system OmpA/MotB [Acinetobacter lwoffii SH145]
gi|262309313|gb|EEY90444.1| type VI secretion system OmpA/MotB [Acinetobacter lwoffii SH145]
Length = 217
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 53/128 (41%), Gaps = 1/128 (0%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLI 85
+ ++ V + + + S+ FDT+ +I+P L+ + E + L+
Sbjct: 86 QATAGTGVDVNRNADGSINLVMPGSITFDTNKSNIKPNFYGTLNKVAQVLTEDNQSGILV 145
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
G+ D G+ + ++ L RA +V Y +G+S +R+ G P +
Sbjct: 146 TGYTDSTGNDSINLPLSQARANSVATYLAGQGVSRTRINAQGLGSANPIADNTTAAGKEQ 205
Query: 146 NRRAIVFL 153
NRR + +
Sbjct: 206 NRRVEIAV 213
>gi|209964330|ref|YP_002297245.1| chemotaxis MotB protein [Rhodospirillum centenum SW]
gi|209957796|gb|ACI98432.1| chemotaxis MotB protein [Rhodospirillum centenum SW]
Length = 309
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 54/137 (39%), Gaps = 6/137 (4%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ + + + + + + D V F + S ++ A VL L L + +E
Sbjct: 169 EAAGLPPDVGFTVEDRRIAIELRDRVLFRSGSAALETAGTAVLDRLVPMLARMPGTITVE 228
Query: 87 GHAD----ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
GH D S+ L RA AV + VA G+ A R++ T P D
Sbjct: 229 GHTDPVAIATTRFPSNWELSAARAAAVVRHLVAAGVPAQRLRATGLADSRPL--TTDPAR 286
Query: 143 YAKNRRAIVFLKGCRAN 159
+A NRR + + G A+
Sbjct: 287 WAMNRRVEIVIDGAPAS 303
>gi|78778212|ref|YP_394527.1| OmpA/MotB [Sulfurimonas denitrificans DSM 1251]
gi|78498752|gb|ABB45292.1| OmpA/MotB [Sulfurimonas denitrificans DSM 1251]
Length = 348
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHA 89
P T + ++ S V + FDT+SY + A + + +L+ + I GH
Sbjct: 222 PKTPIGHKVDKDGCSVLVDLHINFDTASYKVDNASMPKVKEFAEFLKDMPNYNAKIVGHT 281
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D +GS + L RA +V V GI R+ G++ P ++ A+NRR
Sbjct: 282 DSVGSDKDNQKLSENRANSVKTLIVKEGIDTKRITTEGKGEKSPIATNDTKEGKAQNRRI 341
Query: 150 IVFL 153
L
Sbjct: 342 EAEL 345
>gi|293408320|ref|ZP_06652159.1| hypothetical protein ECEG_03255 [Escherichia coli B354]
gi|291471498|gb|EFF13981.1| hypothetical protein ECEG_03255 [Escherichia coli B354]
Length = 433
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 40/105 (38%), Gaps = 4/105 (3%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIA----LGLRRAYA 108
F ++ A V+ + + + GH D ++ L +RA
Sbjct: 327 MFIPGQKTVNDALRPVIDKAAREIARVGGAVTVTGHTDSQPIHSAEFPSNQVLSEKRAAE 386
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V + + GI ASR++V G +P + A+NRR + +
Sbjct: 387 VASLLTSGGIPASRIRVVGKGDTVPVADNRTKTGRAQNRRVEILV 431
>gi|171058626|ref|YP_001790975.1| peptidoglycan-associated lipoprotein [Leptothrix cholodnii SP-6]
gi|170776071|gb|ACB34210.1| peptidoglycan-associated lipoprotein [Leptothrix cholodnii SP-6]
Length = 196
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 55/107 (51%), Gaps = 1/107 (0%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRR 105
+ V+FD SY ++ V+ + LIEGH DE G R ++ALG RR
Sbjct: 88 GLPRVVYFDFDSYVVKDTYRPVIEANAKYLGVDRKRQMLIEGHTDERGGREYNLALGQRR 147
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
A AV G+ S+ + SYG+E P+ G DE A+AKNRRA +
Sbjct: 148 AEAVVRALALLGVPDSQTEAVSYGEERPAASGADEAAWAKNRRAELK 194
>gi|330830247|ref|YP_004393199.1| sodium-type flagellar protein MotY [Aeromonas veronii B565]
gi|328805383|gb|AEB50582.1| Sodium-type flagellar protein MotY [Aeromonas veronii B565]
Length = 277
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYAVFN 111
+D +S + + L+ + +++ +I+ ++D G R ++ L +RA A+
Sbjct: 170 YDKNSDQLSIPSKRRLAMISEFIKADKGIDVVVIDAYSDSYGGRWPNLKLSEKRADAIKK 229
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
FV GI ++ V +G++ E AKNRR ++
Sbjct: 230 VFVDLGIDPGKISVEGHGEKQHVASNETEQGRAKNRRVVI 269
>gi|300902742|ref|ZP_07120699.1| OmpA family protein [Escherichia coli MS 84-1]
gi|300405215|gb|EFJ88753.1| OmpA family protein [Escherichia coli MS 84-1]
Length = 211
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 59/118 (50%), Gaps = 1/118 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD+SS +++PA L+ + L+++ + G+ D
Sbjct: 94 GTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
G + ++ L +RA +V + + +G+ ASR++ G P + A+NRR
Sbjct: 154 STGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRR 211
>gi|238924159|ref|YP_002937675.1| hypothetical protein EUBREC_1797 [Eubacterium rectale ATCC 33656]
gi|238875834|gb|ACR75541.1| hypothetical protein EUBREC_1797 [Eubacterium rectale ATCC 33656]
Length = 275
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 51/132 (38%), Gaps = 7/132 (5%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEG 87
+S + + S+ ++ F++ + V++ + S L + + IEG
Sbjct: 133 TSLQDAVEVDFNAQYVQLSLNGALLFESGKADVMEEAYPVVNKISSILAAYQDNLIEIEG 192
Query: 88 HADELG-----SRNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDED 141
H D + S+ L + RA +V NY + + +K + G P +
Sbjct: 193 HTDNVPVSSRSKYESNDVLSMYRALSVANYIRDNTSLNPAHIKSSGRGDYDPVADNSTPE 252
Query: 142 AYAKNRRAIVFL 153
A+NRR + +
Sbjct: 253 GRARNRRVEIKV 264
>gi|221209294|ref|ZP_03582275.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1]
gi|221169982|gb|EEE02448.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1]
Length = 220
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRNSSIALGLR 104
S+ F + ++ PA L L + + ++ + G+ D +GS S++AL R
Sbjct: 110 VSLAGDALFASGLATLTPAARASLDKLLNAYGDRSYTQVSVTGYTDSVGSDASNLALSKR 169
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RA AV Y RG++A + VT G P + A NRR + L+
Sbjct: 170 RAEAVAAYLQQRGLNARTLTVTGRGSADPIATNATAEGRATNRRVEISLQ 219
>gi|269966185|ref|ZP_06180275.1| putative protein F-related protein [Vibrio alginolyticus 40B]
gi|269829332|gb|EEZ83576.1| putative protein F-related protein [Vibrio alginolyticus 40B]
Length = 224
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 1/111 (0%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALG 102
+ + V F T S + + N+G +L + D D +I+GHAD G+ + + L
Sbjct: 110 LMIRLKEHVHFQTGSARLSAQSQDWIRNIGHYLAGRTDVDVVIDGHADSTGAESFNDTLS 169
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+RA V +A I R+ +G+ +P A NRR + L
Sbjct: 170 EKRAREVEKQLLATSIPRQRVFSRGFGEYVPKCSNATASGKACNRRVELTL 220
>gi|163787037|ref|ZP_02181484.1| membrane protein, OmpA family [Flavobacteriales bacterium ALC-1]
gi|159876925|gb|EDP70982.1| membrane protein, OmpA family [Flavobacteriales bacterium ALC-1]
Length = 531
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 53/135 (39%), Gaps = 2/135 (1%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK-H 79
D + V ++ ++ V FD+ ++P + L L +
Sbjct: 394 TDLETSSGIPGADVDAIGAIGAAMRLNLDSKVLFDSGKSELKPEGLLALKELAKNISVLK 453
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGH 138
+ +IEGH D++GS ++ L L RA +V + + YG++ P V +
Sbjct: 454 SGNVIIEGHTDDVGSSENNKNLSLARAKSVSTELKKLIPSKTFKWREKGYGEKKPLVENN 513
Query: 139 DEDAYAKNRRAIVFL 153
E KNRR + +
Sbjct: 514 SEKNRTKNRRVEILI 528
>gi|157146352|ref|YP_001453671.1| outer membrane protein A [Citrobacter koseri ATCC BAA-895]
gi|157083557|gb|ABV13235.1| hypothetical protein CKO_02111 [Citrobacter koseri ATCC BAA-895]
Length = 356
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L + S L + D ++ G D +GS + L
Sbjct: 226 TLKSDVLFNFNKATLKPEGQQALDQMYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSE 285
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
+RA +V +Y +++GI A ++ G+ P + A A +RR + +K
Sbjct: 286 KRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKARAALIDCLAPDRRVEIEVK 345
Query: 155 GCR 157
G +
Sbjct: 346 GVK 348
>gi|152996217|ref|YP_001341052.1| peptidoglycan-associated lipoprotein [Marinomonas sp. MWYL1]
gi|150837141|gb|ABR71117.1| Peptidoglycan-associated lipoprotein [Marinomonas sp. MWYL1]
Length = 192
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
+G + T + + V + + + V +FD +RP + L+ +
Sbjct: 54 AFGAGQGDAMTSVIVEEEVTTNDNGMDSLA-GVQTVFYFDFDKSIVRPESREALAKHAEY 112
Query: 76 -LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
+ D ++EGHADE G+R ++ALG RRA A+ Y +G++AS+++ S+G+E+P
Sbjct: 113 LVSHPDARIVLEGHADERGTREYNMALGERRAKAISRYLTIQGVAASQIETVSFGEEVPV 172
Query: 135 VYGHDEDAYAKNRRAIV 151
+GHD +A+ NRR V
Sbjct: 173 AFGHDSNAWQLNRRVEV 189
>gi|157962526|ref|YP_001502560.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC
700345]
gi|157847526|gb|ABV88025.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345]
Length = 324
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 2/127 (1%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
K VL ++ Q S G+SVF S + + + S L + +
Sbjct: 195 KPLDKQQVLITPTINVQSVSIRGNSVF-GFDSSKLT-DTSALDEVIKSALASKNASISVT 252
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ D LG+ ++AL RRA A YF+ G++ SR+ + G+E P A N
Sbjct: 253 AYTDSLGAERYNLALAKRRAEATQAYFITHGVAPSRIHIDWKGEENPVSSNMTAKGRALN 312
Query: 147 RRAIVFL 153
RR + +
Sbjct: 313 RRVEIEI 319
>gi|332140722|ref|YP_004426460.1| sodium-type flagellar protein MotY [Alteromonas macleodii str.
'Deep ecotype']
gi|327550744|gb|AEA97462.1| sodium-type flagellar protein MotY [Alteromonas macleodii str.
'Deep ecotype']
Length = 290
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYAVFN 111
+ +S + + L+ +G +L++ L++G+ D G R ++ L +RRA V +
Sbjct: 186 YQNNSTELTKYSQKRLTMIGEYLKEDSELELVLLDGYTDSYGGRWNNEQLSIRRANEVKS 245
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
Y G+ R+++T +G++ ++ A+NRR +V L
Sbjct: 246 YLTTLGVPEDRIQLTGHGEKRHIAPNDTRESRAQNRRVVVRLS 288
>gi|90020235|ref|YP_526062.1| OmpA domain-containing protein [Saccharophagus degradans 2-40]
gi|89949835|gb|ABD79850.1| OmpA/MotB [Saccharophagus degradans 2-40]
Length = 381
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLR 104
++ S+ FD +S ++ + + + ++ ++ + +EG+ D+ GS + L +
Sbjct: 262 VAINLSIQFDNNSAVVKESYYAEVKRVADFMNQYANTQVSVEGYTDDRGSAAYNKQLSQK 321
Query: 105 RAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RA AV V++ A+R+ T +G+ P A NRR + +
Sbjct: 322 RADAVKATLVSQFNIDAARVTATGFGEINPIDTNDTAAGRAANRRVVANVS 372
>gi|2130949|dbj|BAA20285.1| PomB [Vibrio alginolyticus]
Length = 315
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 46/128 (35%), Gaps = 5/128 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ +L +Q + + F S ++P ++ + ++ + GH D
Sbjct: 174 QGAIEVENLGQQIVIRMREKGAFPEGSAFLQPKFRPLVRQIAELVKDVPGIVRVSGHTDN 233
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S+ L +RA +V RG S R++V P + +D A N
Sbjct: 234 RPLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRLRVRGMADTEPLLPNDSDDNRALN 293
Query: 147 RRAIVFLK 154
RR + +
Sbjct: 294 RRVEISIM 301
>gi|291616946|ref|YP_003519688.1| OmpA [Pantoea ananatis LMG 20103]
gi|291151976|gb|ADD76560.1| OmpA [Pantoea ananatis LMG 20103]
Length = 367
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 59/145 (40%), Gaps = 12/145 (8%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDC 81
D +P + + + ++ V F + +++P Q L L S ++ D
Sbjct: 215 DVAAPAPAPAPAPAPVVQTKRFTLKSDVLFTFNKSTLKPEGQQALDQLYSQLSSMDPKDG 274
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHD 139
++ G D +GS + L +RA +V +Y V++GI A+++ G+ P
Sbjct: 275 SVVVLGFTDRIGSEQYNQKLSEKRAQSVVDYLVSKGIPANKISARGMGESNPVTGNTCDS 334
Query: 140 EDAY-------AKNRRAIVFLKGCR 157
A +RR + +KG +
Sbjct: 335 VKGRKALIDCLAPDRRVEIDVKGIK 359
>gi|190574215|ref|YP_001972060.1| flagellar motor protein MotD [Stenotrophomonas maltophilia K279a]
gi|190012137|emb|CAQ45760.1| putative chemotaxis protein MotB [Stenotrophomonas maltophilia
K279a]
Length = 338
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 4/114 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG----SRNSSI 99
+ + F T S ++ Q L++L L +EGH D + + S+
Sbjct: 159 IEVEINSDILFPTGSAALDVHARQTLASLAEVLRDVPNSVRVEGHTDNVPIATATFPSNW 218
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V + F +G+ SR+ + YG+ P +NRR +V +
Sbjct: 219 ELSAGRAASVVHLFADQGVQPSRLAMVGYGQFRPREENDSAQGRNRNRRVMVII 272
>gi|157962805|ref|YP_001502839.1| flagellar motor protein MotB [Shewanella pealeana ATCC 700345]
gi|157847805|gb|ABV88304.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345]
Length = 322
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 56/133 (42%), Gaps = 5/133 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
D + SL +Q + + F + S ++P V+ +G L+ + GH D
Sbjct: 180 VDGAIEIESLGQQIIIRIREKGAFASGSGFLQPRFKPVVRRVGELLKDVPGIVTVSGHTD 239
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ +S+ L +RA AV + + +G +RMKV P V + A+
Sbjct: 240 DWNISNELYSSNWDLSSKRAVAVGHELIKVKGFEPNRMKVVGMASSDPLVENNSSANRAR 299
Query: 146 NRRAIVFLKGCRA 158
NRR + ++ +A
Sbjct: 300 NRRVEIAIEQGKA 312
>gi|332668302|ref|YP_004451090.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis DSM
1100]
gi|332337116|gb|AEE54217.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 1170
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 54/134 (40%), Gaps = 1/134 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKH 79
+ +I+ + + + + + FD S +I+ + I +L + + +
Sbjct: 1032 TATIGVEITKKNIPELTAGRIRNGQAIRIEQLQFDVDSINIKSSFIPILDEVFEFLTDNP 1091
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ GH + L I L RA +V Y + +GI A R++ YG+ +P
Sbjct: 1092 GIIVEVGGHTNGLCQDEFCIRLSTARAKSVAEYLIKKGIDAKRVQFKGYGRSVPIATNST 1151
Query: 140 EDAYAKNRRAIVFL 153
+ KN+R + +
Sbjct: 1152 PEGRQKNQRVEIKI 1165
>gi|297569008|ref|YP_003690352.1| peptidoglycan-associated lipoprotein [Desulfurivibrio alkaliphilus
AHT2]
gi|296924923|gb|ADH85733.1| peptidoglycan-associated lipoprotein [Desulfurivibrio alkaliphilus
AHT2]
Length = 194
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/123 (30%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHAD 90
DT E +++E +S V++D +IR + L + +++ + IEG+ D
Sbjct: 70 DTAAAELAVKEGRTSGPLMPVYYDFDRSNIRADQEERLVHNSNYMLDNPRVRVRIEGNTD 129
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
E G+R ++ALG RRA + Y + G++A R++ SYG+E P +G DE +++ NRR+
Sbjct: 130 ERGTREYNMALGERRALSAKKYLIDLGVAAERLETLSYGEERPISFGRDELSWSLNRRSD 189
Query: 151 VFL 153
+
Sbjct: 190 FVI 192
>gi|153831615|ref|ZP_01984282.1| OmpA family protein [Vibrio harveyi HY01]
gi|148872125|gb|EDL70942.1| OmpA family protein [Vibrio harveyi HY01]
Length = 301
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 56/158 (35%), Gaps = 9/158 (5%)
Query: 1 MQYSTIFII-LSAITMMSISGIDN-------LDTKISSPDTVLNESSLQEQFSSSVGDSV 52
M+ + + + A +++ D + L L Q + +
Sbjct: 1 MKTTIRLLSGMIAGAILAGCSADAYVSQENREKFADVNVSKFLISECLAPQREIHIAVAQ 60
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FD IR AD L ++ I GH D GS + L +RRA +V Y
Sbjct: 61 HFDFDKSIIREADAASLDAFIRDIQGLSGRITIVGHTDFKGSDEYNEKLSMRRAESVEAY 120
Query: 113 FVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
+ +V +G+ P G + A A+NRRA
Sbjct: 121 LQQQLNPEQYDWEVKHFGESQPLALGKSDQARAENRRA 158
Score = 59.4 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FD ++P D+ L + + L+ + ++ GH D++GS + + L RRA V Y
Sbjct: 190 HFDFDKSELKPEDLSQLDDFIAKLQGLEGSIMVAGHTDQVGSLSYNEQLAERRAQTVVAY 249
Query: 113 FVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ + +V ++G+ P + +A A NRRA + K
Sbjct: 250 LKTKLDPSQFVWEVKAFGELQPVINEESPEANALNRRAFIVFK 292
>gi|37676733|ref|NP_937129.1| putative protein F-related protein [Vibrio vulnificus YJ016]
gi|37201276|dbj|BAC97099.1| putative protein F-related protein [Vibrio vulnificus YJ016]
Length = 193
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIA 100
+ + +++ F T S + P + + LG++ ++ D D +I+GHAD G+ + +
Sbjct: 77 DHIMIHLTETIHFKTGSAEVSPVSARWIGLLGNYLNQRSDVDIVIDGHADSTGTTGFNNS 136
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RRA V + + SR+ YG+ +P+ + NRR + L
Sbjct: 137 LSERRAEEVKKQLLMSRVPESRVYTRGYGEYLPACSNTSINGRKCNRRVELML 189
>gi|254523338|ref|ZP_05135393.1| MotB protein [Stenotrophomonas sp. SKA14]
gi|219720929|gb|EED39454.1| MotB protein [Stenotrophomonas sp. SKA14]
Length = 338
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 4/114 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG----SRNSSI 99
+ + F T S ++ Q L++L L +EGH D + + S+
Sbjct: 159 IEVEINSDILFPTGSAALDVHARQTLASLADVLRDVPNSVRVEGHTDNVPIATATFPSNW 218
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V + F +G+ SR+ + YG+ P +NRR +V +
Sbjct: 219 ELSAGRAASVVHLFADQGVQPSRLAMVGYGQFRPREENDSAQGRNRNRRVMVII 272
>gi|124010248|ref|ZP_01694902.1| chemotaxis protein MotB [Microscilla marina ATCC 23134]
gi|123983684|gb|EAY24121.1| chemotaxis protein MotB [Microscilla marina ATCC 23134]
Length = 286
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 46/128 (35%), Gaps = 6/128 (4%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADE 91
L +S + S+ + + F + + + L L + D D IEGH D
Sbjct: 146 DELTVTSKNGKIYVSLAEKLLFKSGRTDVDRKGKKALGKLAEVLNKNQDIDIQIEGHTDS 205
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ + L + RA ++ V + + G+ P +++ AKN
Sbjct: 206 IPITTARFRDNWDLSVLRATSIVRILVKDYEVDPKTLTPAGRGETTPVASNKNKEGRAKN 265
Query: 147 RRAIVFLK 154
RR + L
Sbjct: 266 RRIEIVLS 273
>gi|186477828|ref|YP_001859298.1| OmpA/MotB domain-containing protein [Burkholderia phymatum STM815]
gi|184194287|gb|ACC72252.1| OmpA/MotB domain protein [Burkholderia phymatum STM815]
Length = 242
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 39/112 (34%), Gaps = 1/112 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLR 104
++ F S ++ P L + + I G+ D GS + L
Sbjct: 131 ITLQGDATFAVGSATLTPFATAKLDDFVAANQGVDVDRLTIAGYTDSTGSAELNNRLSAA 190
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
RA +V Y G+ AS V YG P AKNRR + + G
Sbjct: 191 RARSVQGYLATAGLRASAWDVQGYGSASPVAPNKTAIGRAKNRRVEIQVDGK 242
>gi|322614563|gb|EFY11492.1| hypothetical protein SEEM315_18040 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322620081|gb|EFY16953.1| hypothetical protein SEEM971_15751 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322623376|gb|EFY20215.1| hypothetical protein SEEM973_06161 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322629326|gb|EFY26105.1| hypothetical protein SEEM974_10273 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322632046|gb|EFY28800.1| hypothetical protein SEEM201_09439 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322637216|gb|EFY33918.1| hypothetical protein SEEM202_19199 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322639968|gb|EFY36639.1| hypothetical protein SEEM954_15657 [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322645904|gb|EFY42424.1| hypothetical protein SEEM054_14670 [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322652397|gb|EFY48751.1| hypothetical protein SEEM675_07291 [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322652601|gb|EFY48951.1| hypothetical protein SEEM965_20397 [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322660411|gb|EFY56647.1| hypothetical protein SEEM19N_20108 [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322664564|gb|EFY60757.1| hypothetical protein SEEM801_06607 [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322669383|gb|EFY65533.1| hypothetical protein SEEM507_01240 [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322670929|gb|EFY67062.1| hypothetical protein SEEM877_06997 [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322678832|gb|EFY74887.1| hypothetical protein SEEM867_12360 [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322681861|gb|EFY77886.1| hypothetical protein SEEM180_16428 [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322687987|gb|EFY83953.1| hypothetical protein SEEM600_10746 [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323194341|gb|EFZ79536.1| hypothetical protein SEEM581_21554 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323197757|gb|EFZ82889.1| hypothetical protein SEEM501_21645 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323203447|gb|EFZ88472.1| hypothetical protein SEEM460_07455 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323206808|gb|EFZ91761.1| hypothetical protein SEEM020_02639 [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323213373|gb|EFZ98174.1| hypothetical protein SEEM6152_07603 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323214666|gb|EFZ99417.1| hypothetical protein SEEM0077_18540 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323221803|gb|EGA06208.1| hypothetical protein SEEM0047_03122 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323230011|gb|EGA14131.1| hypothetical protein SEEM0052_01387 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323233750|gb|EGA17839.1| hypothetical protein SEEM3312_07048 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323238556|gb|EGA22614.1| hypothetical protein SEEM5258_09862 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323244244|gb|EGA28253.1| hypothetical protein SEEM1156_09790 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323246405|gb|EGA30388.1| hypothetical protein SEEM9199_12008 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323252212|gb|EGA36065.1| hypothetical protein SEEM8282_14849 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323259875|gb|EGA43506.1| hypothetical protein SEEM8284_21890 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323265110|gb|EGA48609.1| hypothetical protein SEEM8285_20494 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323272673|gb|EGA56080.1| hypothetical protein SEEM8287_15269 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
Length = 434
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 40/123 (32%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
L + F ++ A V++ + + + GH D
Sbjct: 310 LTVDEDDQHSRVVFRGDAMFVPGQKTVSDAIRPVINKAAREIARVGGAVTVTGHTDSQPI 369
Query: 95 RNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
++ L +RA V + G+ A R+ + G +P + AKNRR
Sbjct: 370 HSAEFPSNLVLSEKRAAEVAALLTSGGVPAGRVHIVGKGDTVPVADNDSKAGRAKNRRVE 429
Query: 151 VFL 153
+ +
Sbjct: 430 ILV 432
>gi|167896753|ref|ZP_02484155.1| hypothetical protein Bpse7_23620 [Burkholderia pseudomallei 7894]
Length = 389
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 42/127 (33%), Gaps = 4/127 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
L+ + S F + + PA ++ + + + + + G+ D
Sbjct: 261 AAGTLSVEENARRSSVMFRGDAMFAPGAAGVNPAMGPLIRKIAAEIARVPGKVTVRGYTD 320
Query: 91 ELGSRNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
++ A L RA V + G+ ASR++ G P A N
Sbjct: 321 NQPIKSRQFASNEALSEERATQVMQMLQSAGVPASRLEALGKGGAEPIGDNRTPQGRALN 380
Query: 147 RRAIVFL 153
RR + +
Sbjct: 381 RRVEITV 387
>gi|152988440|ref|YP_001349604.1| hypothetical protein PSPA7_4250 [Pseudomonas aeruginosa PA7]
gi|150963598|gb|ABR85623.1| probable outer membrane lipoprotein [Pseudomonas aeruginosa PA7]
Length = 159
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 1/114 (0%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSI 99
E + + V F + + P L+ + L +EGH D G ++
Sbjct: 43 DEGWEFGMSSKVLFGNNLDRLNPDSRTTLTKIARALLDVGIDKVRLEGHTDNYGDEGYNL 102
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RRA +V F G+ A+ ++V G P ++NRR + +
Sbjct: 103 KLSERRAESVAAVFREAGMPAANIEVRGLGMSRPVADNKTRAGRSENRRVAIIV 156
>gi|332186728|ref|ZP_08388471.1| type IV / VI secretion system , DotU family domain protein
[Sphingomonas sp. S17]
gi|332013380|gb|EGI55442.1| type IV / VI secretion system , DotU family domain protein
[Sphingomonas sp. S17]
Length = 475
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 39/105 (37%), Gaps = 4/105 (3%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG----SRNSSIALGLRRAYA 108
F + S + P + +G +E +IEGHAD ++AL RA
Sbjct: 367 LFRSGSDELEPGREPLFHRIGRAIEDEKGGVVIEGHADNTPVATVRFPDNMALSEARAET 426
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V + SR+ G +P D ++NRR + +
Sbjct: 427 VAKLIRSDLSDPSRVTTKGLGDTVPIASNADAAGKSQNRRVEIVV 471
>gi|239995142|ref|ZP_04715666.1| TolC family type I secretion outer membrane protein [Alteromonas
macleodii ATCC 27126]
Length = 648
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 55/133 (41%), Gaps = 2/133 (1%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
G + + ++ + + + + +S ++ F ++S + P L ++ L
Sbjct: 506 GCEAREPDMAPEPSAADFTLDNAKIINSFNVNIEFASNSTEVLPEYENSLQDVIEALNND 565
Query: 80 DCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYG 137
+I GHA G + L RRA AV + + + I A R+ YG+ P V
Sbjct: 566 PNSGVIIHGHASLDGDAAYNQRLSERRAKAVASLLMNKANIEARRITAVGYGESRPLVDE 625
Query: 138 HDEDAYAKNRRAI 150
+ A A+NRR
Sbjct: 626 ESDAANARNRRIE 638
>gi|940548|emb|CAA81039.1| Outer membrane or porin protein [Leptothrix discophora]
Length = 84
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 37/75 (49%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
+ GH D GS + L + RA AV Y V++GI +R+ + G++ P ++
Sbjct: 6 IIAVGHTDSDGSDALNDKLSVSRAEAVKKYLVSKGIEQNRVYTEAKGEKQPVADNSTKEG 65
Query: 143 YAKNRRAIVFLKGCR 157
KNRR + + G R
Sbjct: 66 KQKNRRVEIGVVGTR 80
>gi|325269589|ref|ZP_08136204.1| OmpA family protein [Prevotella multiformis DSM 16608]
gi|324988067|gb|EGC20035.1| OmpA family protein [Prevotella multiformis DSM 16608]
Length = 289
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 45/119 (37%), Gaps = 11/119 (9%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC----------DFLIEGHADELGSR 95
S+ D++ + + SY + Q LS + + + + I D++ +
Sbjct: 150 ISLADNMLYKSGSYEVNDRAEQTLSKIAKIITDYKDYDVLIEGNTDNVPINTANDKMKNI 209
Query: 96 NSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L RA +V Y R ++ R+ G+ P E +NRR + +
Sbjct: 210 RNNWDLSCLRAASVVQYLQDRFGVNPKRLTAGGRGEYNPLATNDTELGKQRNRRTQIII 268
>gi|229522237|ref|ZP_04411653.1| protein F-related protein [Vibrio cholerae TM 11079-80]
gi|229340222|gb|EEO05228.1| protein F-related protein [Vibrio cholerae TM 11079-80]
Length = 204
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 1/111 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIA 100
+ + ++V F+ S + A Q L + + + D ++EGH D GS +
Sbjct: 87 DYPMIKLNNTVRFEIGSAKVSMASKQWLDTVARFLAAESGIDIVLEGHTDNTGSEKLNDK 146
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
L RRA AV V ++ + + +G+ +P+ ++ A NRR +
Sbjct: 147 LAERRANAVKAALVQSRVAQNAIYTRGFGENVPACTNSTKNGRACNRRVEI 197
>gi|218708964|ref|YP_002416585.1| sodium type flagellar protein MotY precursor [Vibrio splendidus
LGP32]
gi|218321983|emb|CAV17990.1| Sodium type flagellar protein MotY precursor [Vibrio splendidus
LGP32]
Length = 293
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYA 108
+ +D +S + + + LS + ++ + L+ + D + S+ S L RRA +
Sbjct: 184 ILHYDRNSDQLNKSSRKRLSQIADYVRYNQDIDLVLVATYTDSVDSKGISQNLSERRAES 243
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ YF + G+ R++V YGK P + KNRR ++ L
Sbjct: 244 LREYFKSLGLPEDRIQVQGYGKRRPIADNNSPIGKDKNRRVVISL 288
>gi|84393403|ref|ZP_00992162.1| sodium-type flagellar protein MotY precursor [Vibrio splendidus
12B01]
gi|84376012|gb|EAP92901.1| sodium-type flagellar protein MotY precursor [Vibrio splendidus
12B01]
Length = 293
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYA 108
+ +D +S + + + LS + ++ + L+ + D + S+ S L RRA +
Sbjct: 184 ILHYDRNSDQLNKSSRKRLSQIADYVRYNQDIDLVLVATYTDSVDSKGISQNLSERRAES 243
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ YF + G+ R++V YGK P + KNRR ++ L
Sbjct: 244 LREYFKSLGLPEDRIQVQGYGKRRPIADNNSPIGKDKNRRVVISL 288
>gi|328947766|ref|YP_004365103.1| OmpA/MotB domain protein [Treponema succinifaciens DSM 2489]
gi|328448090|gb|AEB13806.1| OmpA/MotB domain protein [Treponema succinifaciens DSM 2489]
Length = 490
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 4/109 (3%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKH----DCDFLIEGHADELGSRNSSIALGLRR 105
++ F SY + P + ++ + L+K + LIEGH ++ N + L ++R
Sbjct: 373 QNLRFIADSYELLPQEKPRIAQIAESLKKATSSGEYTILIEGHTADVNKPNGQMTLSIQR 432
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
A + V+ GI + +G P A NRR + +
Sbjct: 433 AQEIIKELVSNGIDKNLFTYRGFGGTKPVADNSTPQGRALNRRVEIIIM 481
>gi|262274767|ref|ZP_06052578.1| Flagellar motor rotation protein MotB [Grimontia hollisae CIP
101886]
gi|262221330|gb|EEY72644.1| Flagellar motor rotation protein MotB [Grimontia hollisae CIP
101886]
Length = 309
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 55/149 (36%), Gaps = 5/149 (3%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
M S++ + + + + +L +Q + ++ F S ++P ++ +
Sbjct: 143 MSSVAQMVVQALEREVEEGAVEVENLGQQLIIRIRENGAFPAGSAFLQPKFRPLVRQIAD 202
Query: 75 WLEKHDCDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYG 129
++ + GH D+ S+ L +RA +V G RM+V
Sbjct: 203 LVKDVPGIVRVSGHTDDSPLDSELYRSNWDLSAQRAVSVAQEMEKVEGFDPMRMRVEGLA 262
Query: 130 KEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
P V + A+NRR + + +A
Sbjct: 263 GSSPRVPNDTPENRAQNRRVEIAIMQGKA 291
>gi|114776497|ref|ZP_01451542.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Mariprofundus ferrooxydans PV-1]
gi|114553327|gb|EAU55725.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Mariprofundus ferrooxydans PV-1]
Length = 499
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 44/102 (43%), Gaps = 1/102 (0%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F + S I +L + + D IEGH D G + L L+RA AV ++
Sbjct: 393 FASGSSKINAKYYDMLGQVKEAFAIYADRKIRIEGHTDNKGDVKVNQRLSLKRAEAVRDF 452
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+A G SR+K YG+ P + A NRR V ++
Sbjct: 453 LIAAGADGSRLKALGYGEVRPIASNEFDRGRAMNRRIDVVIE 494
>gi|90407861|ref|ZP_01216037.1| hypothetical outer membrane protein OmpA [Psychromonas sp. CNPT3]
gi|90311036|gb|EAS39145.1| hypothetical outer membrane protein OmpA [Psychromonas sp. CNPT3]
Length = 339
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 49/132 (37%), Gaps = 2/132 (1%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-C 81
+ + V + + +S V F S + +Q L+ + L+ +
Sbjct: 198 AEEPVQEKVEAVKEKVQDKMMKIASEKVQVAFPFGSSVLSEESMQQLTPVIEHLKAYPDA 257
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDE 140
+ GH D G + ++RA A+ Y I SRM V+ G+ MP
Sbjct: 258 KLFLVGHTDASGPAEYNQTFSVKRADALATYLSEEFSIDKSRMTVSGEGESMPIATNDTT 317
Query: 141 DAYAKNRRAIVF 152
+ A NRR VF
Sbjct: 318 EGRAMNRRVSVF 329
>gi|317486290|ref|ZP_07945122.1| OmpA family protein [Bilophila wadsworthia 3_1_6]
gi|316922460|gb|EFV43714.1| OmpA family protein [Bilophila wadsworthia 3_1_6]
Length = 340
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/153 (22%), Positives = 58/153 (37%), Gaps = 10/153 (6%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLN--------ESSLQEQFSSSVGDSVFFDTSSYS 60
L AI ++ + + D ++ + + V V F Y
Sbjct: 186 TLDAIAALNACSVSVKAIDLLKSDAAVDKFVGDVFCQERVAVVEDVVVLRGVNFAFDKYD 245
Query: 61 IRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
+ P +L+ +E + + G D +G+ ++ L RRA AV NY VA+G+
Sbjct: 246 LTPEAQGILNEAARIIMEHPNMKVQLLGWTDSIGTDAYNLKLSQRRADAVKNYLVAQGVP 305
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
ASRM GK + E+ NRR +
Sbjct: 306 ASRMIAIGKGKSF-RYDNNTEEGRYMNRRTELV 337
>gi|296159295|ref|ZP_06842121.1| type IV / VI secretion system protein, DotU family [Burkholderia
sp. Ch1-1]
gi|295890554|gb|EFG70346.1| type IV / VI secretion system protein, DotU family [Burkholderia
sp. Ch1-1]
Length = 443
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 18/127 (14%), Positives = 43/127 (33%), Gaps = 4/127 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
++ S + F + +++ + +++ + + K + G+ D
Sbjct: 315 AAGTVSVDEDAHHSSVTFRGDSMFPPGAAAVKTSMTPLITKIAGEIAKVSGKVSVLGYTD 374
Query: 91 ELGSRNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ ++ A L RA + G+ A R++ G P A+N
Sbjct: 375 NVPIKSRQFASNAALSEERATQIMQMLQTAGVPAVRLEAVGRGDADPVGDNTTVQGRAQN 434
Query: 147 RRAIVFL 153
RR + +
Sbjct: 435 RRVEITV 441
>gi|302879780|ref|YP_003848344.1| peptidoglycan-associated lipoprotein [Gallionella capsiferriformans
ES-2]
gi|302582569|gb|ADL56580.1| peptidoglycan-associated lipoprotein [Gallionella capsiferriformans
ES-2]
Length = 169
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 15/164 (9%)
Query: 3 YSTIFIILSAITMMSISGIDN-------------LDTKISSPDTVLNESS-LQEQFSSSV 48
+ I + + +++ D + + E L + S
Sbjct: 1 MKKLVISIVLLNLLAACASQKPHETAAPAPVAKAADVVTAPATSTSTEVDALNDPKSILA 60
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
G SVF+ +++ AD ++ + E + +EG+ DE GS ++ LG RRA
Sbjct: 61 GRSVFYPFDVSAVQDADKPLVQAHAKYLSEHANRTVKLEGNCDERGSNEYNLGLGQRRAD 120
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
V G A+++ SYG+EMP GHDE ++++NRR +
Sbjct: 121 GVQKMLELGGAKAAQVTSVSYGEEMPKAAGHDEASWSQNRRTDL 164
>gi|3915781|sp|P24017|OMPA_KLEPN RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II; Flags: Precursor
gi|3201545|emb|CAA04450.1| outer membrane protein A [Klebsiella pneumoniae]
Length = 344
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L L + ++ D ++ G+ D +GS + L
Sbjct: 214 TLKSDVLFNFNKATLKPEGQQALDQLYTQLSNMDPKDGSAVVLGYTDRIGSEAYNQQLSE 273
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
+RA +V +Y VA+GI A ++ G+ P + A A +RR + +K
Sbjct: 274 KRAQSVVDYLVAKGIPAGKISARGMGESNPVTGNTCDNVKARAALIDCLAPDRRVEIEVK 333
Query: 155 GCR 157
G +
Sbjct: 334 GYK 336
>gi|328470797|gb|EGF41708.1| hypothetical protein VP10329_08362 [Vibrio parahaemolyticus 10329]
Length = 430
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 48/121 (39%), Gaps = 4/121 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+ +LQ++ S+ F++ S S+ V+S + LE +I GH D+
Sbjct: 304 VTVEALQDRVRISLRAQDLFESGSASVVAYIQPVISKVARTLEATQGKIIITGHTDDRPI 363
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
S+ L L RA ++ +A R+ G P V E+ A NRR
Sbjct: 364 FTSKYPSNWHLSLARATSLSEQLIANSALKGRVIPEGLGDARPLVENDSEENRAMNRRIE 423
Query: 151 V 151
+
Sbjct: 424 I 424
>gi|262198423|ref|YP_003269632.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
gi|262081770|gb|ACY17739.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
Length = 1264
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 58/140 (41%), Gaps = 8/140 (5%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFS------SSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
D LD +P + +E + ++ ++V FD +R ++ + + +
Sbjct: 1123 DYLDNCPDTPGYEVFHGCSEEPLALLTPEHIALTEAVAFDADRVRLRRHARRMFAEVAAI 1182
Query: 76 LEKHD--CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
L H IEG+ D+ G +++ + RA V + +ARG++ R++ YG P
Sbjct: 1183 LHAHPSLRLIQIEGYTDDRGDLEANLRISQHRAEIVRAFLIARGVAEHRLRAVGYGSARP 1242
Query: 134 SVYGHDEDAYAKNRRAIVFL 153
E NRR + +
Sbjct: 1243 IGDNRSERGRELNRRVELRI 1262
>gi|116619472|ref|YP_821628.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222634|gb|ABJ81343.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076]
Length = 267
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 49/125 (39%), Gaps = 5/125 (4%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR----N 96
S+ ++ FF + ++ P + +L+ + + ++ +EGH D
Sbjct: 132 PRGLIISMREATFFASGDDAVAPGSLPILTKIAAVVQSLPNPVRLEGHTDSRPIHTSRFR 191
Query: 97 SSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
S+ L R+ A+ R SRM V Y + P+ E+ A NRR + L
Sbjct: 192 SNWELSAARSIAMLELLRDRFQIPASRMAVAGYAENAPADTNETEEGRAHNRRVDLVLLS 251
Query: 156 CRANT 160
A T
Sbjct: 252 AGAQT 256
>gi|331671759|ref|ZP_08372555.1| OmpA family membrane protein [Escherichia coli TA280]
gi|331070748|gb|EGI42107.1| OmpA family membrane protein [Escherichia coli TA280]
Length = 438
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 40/105 (38%), Gaps = 4/105 (3%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIA----LGLRRAYA 108
F ++ A V+ + + + GH D ++ L +RA
Sbjct: 332 MFIPGQKTVNDALRPVIDKAAREIARVGGAVTVTGHTDSQPIHSAEFPSNQVLSEKRAAE 391
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V + + GI ASR++V G +P + A+NRR + +
Sbjct: 392 VASLLTSGGIPASRIRVVGKGDTVPVADNRTKTGRAQNRRVEILV 436
>gi|291519587|emb|CBK74808.1| Flagellar motor protein [Butyrivibrio fibrisolvens 16/4]
Length = 313
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 52/119 (43%), Gaps = 6/119 (5%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADELG----SR 95
++ ++ F++ + ++++ NL + L ++ + + IEGH D + +
Sbjct: 179 ANYVMITINGALLFNSGKAILTEDALEIVDNLSNILASYNQNIIEIEGHTDNVPMSSGTY 238
Query: 96 NSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L + RA V + + + + +K G+ +P + A+NRR + +
Sbjct: 239 ENNDVLSMYRALYVADRIREKTNLNPAYIKSAGRGEYVPIADNSTAEGRARNRRVEIKI 297
>gi|154687112|ref|YP_001422273.1| flagellar motor protein MotS [Bacillus amyloliquefaciens FZB42]
gi|154352963|gb|ABS75042.1| YtxE [Bacillus amyloliquefaciens FZB42]
Length = 229
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 43/130 (33%), Gaps = 5/130 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
L + + ++V F T + VL + L+ D +EGH D
Sbjct: 100 LTAKRDERGVVLVLQEAVLFQTGKADVLKNAEPVLHQIAVLLKTIPNDIQVEGHTDSRRI 159
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
S+ L RA +V YF A + R Y P +NRR
Sbjct: 160 STYQFPSNWELSSARAASVIRYFTANEDFSAKRFISAGYADTKPVKDNKSPGHMKENRRV 219
Query: 150 IVFLKGCRAN 159
+ +K ++
Sbjct: 220 EIVIKKTTSS 229
>gi|288925232|ref|ZP_06419167.1| OmpA family protein [Prevotella buccae D17]
gi|288337997|gb|EFC76348.1| OmpA family protein [Prevotella buccae D17]
Length = 284
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 48/119 (40%), Gaps = 11/119 (9%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADE---------LGSR 95
S+ D++ + + SY I + LS + ++ D + LIEG+ D + +
Sbjct: 148 ISLADNMLYKSGSYEINDRAEETLSKIAKIIMDYKDYEVLIEGNTDNVPVNTDSPKMKNI 207
Query: 96 NSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L RA +V Y R + R+ G+ P E +NRR + +
Sbjct: 208 RNNWDLSALRASSVVQYLQNRYGVDPKRLTAGGRGEYNPVATNSTELGKQRNRRTQIII 266
>gi|238023632|ref|YP_002907864.1| outer membrane protein [Burkholderia glumae BGR1]
gi|237878297|gb|ACR30629.1| Outer membrane protein [Burkholderia glumae BGR1]
Length = 569
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNSSIALGL 103
++ FD+ +++ I L N+ G L D LI GH D++GS +++ L
Sbjct: 451 GVTLDQLSLFDSGRATLKRDAIPKLRNVLGRILANRDQRVLIAGHTDDVGSPEANLKLSQ 510
Query: 104 RRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA A+ ++FV G +R + +YG P A NRR +
Sbjct: 511 ARALAIRDWFVRVGALPVTRFAIQAYGDTRPIADNLTPQGRAMNRRVEI 559
>gi|187929080|ref|YP_001899567.1| OmpA/MotB domain-containing protein [Ralstonia pickettii 12J]
gi|187725970|gb|ACD27135.1| OmpA/MotB domain protein [Ralstonia pickettii 12J]
Length = 167
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 48/153 (31%), Gaps = 12/153 (7%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS--- 70
+ + + E+ S+ D ++ +S + L
Sbjct: 3 ALSAQLAKQRESLSERIARALAPEAGAAPVGISTKDDRIYISFNSDEGFASGRADLMLML 62
Query: 71 -----NLGSWLEKHDCDFLIEGHADELGSRNSSI----ALGLRRAYAVFNYFVARGISAS 121
L + L + GH D+ + AL RA AV + RGI++
Sbjct: 63 ARQLDRLATVLADTRGKVTVLGHTDDAPGPRDRMESNLALSTARATAVARHLQERGIASD 122
Query: 122 RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
R+ + G + P A NRR + L+
Sbjct: 123 RLSIIGRGVKDPVGDNRTAAGRALNRRVEIILE 155
>gi|119468232|ref|ZP_01611358.1| putative outer membrane protein; signal peptide [Alteromonadales
bacterium TW-7]
gi|119448225|gb|EAW29489.1| putative outer membrane protein; signal peptide [Alteromonadales
bacterium TW-7]
Length = 351
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 55/139 (39%), Gaps = 1/139 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
D + +L E +V V F ++ + + + S+L+ +
Sbjct: 207 ADDKCPNTPMTDAVDGTGCTLYEDKEVTVSLLVTFPNDKAAVSQRYLDDIDQVASFLKDY 266
Query: 80 D-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
L+EGH +G + L +RA +V +A GI++ R+ G+E +
Sbjct: 267 PDTTVLLEGHTSAVGKATYNKMLSKKRADSVAKQLIADGIASDRITTVGLGEERLKNEAN 326
Query: 139 DEDAYAKNRRAIVFLKGCR 157
A+A+NRR +K +
Sbjct: 327 TAAAHAENRRVEAHIKTIK 345
>gi|197337791|ref|YP_002158113.1| OmpA family protein [Vibrio fischeri MJ11]
gi|197315043|gb|ACH64492.1| OmpA family protein [Vibrio fischeri MJ11]
Length = 306
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 7/161 (4%)
Query: 1 MQYS-TIFIILSAITMMSIS-----GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFF 54
MQ ++FI L +++ S +N+D L L Q +G + F
Sbjct: 1 MQIKQSLFIGLGLLSLFGCSTDTYVSQENIDKYDERVQKFLIAECLVPQREIQIGVAEHF 60
Query: 55 DTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
+ I D L+ +EK I GH D GS + L LRRA ++ Y +
Sbjct: 61 EFDKSEIMEGDFPSLNQFVRDIEKLKGRIAIVGHTDYQGSEKYNEQLSLRRADSIKTYLL 120
Query: 115 AR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ ++ YG++ P + G +A A NRRA + +
Sbjct: 121 KQLNADNYEWEIKYYGEKKPLIEGRTLEANAANRRAYLVFE 161
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 50/130 (38%), Gaps = 1/130 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI 85
+ +T + + V + FD ++ D L L LE LI
Sbjct: 161 EQTVEKETNPACLPPEPKRKVYVTMASHFDFDKSVLKEKDKIELDKLALKLEGLTGRILI 220
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYA 144
GH D GS + + L R+ AV Y R +V S+G+ P + H A A
Sbjct: 221 AGHTDYQGSVSYNEKLAKERSIAVQEYLKTRVDPTQFVWEVKSFGESEPIIQEHTLKANA 280
Query: 145 KNRRAIVFLK 154
+NRRA V K
Sbjct: 281 ENRRAFVVFK 290
>gi|254415575|ref|ZP_05029335.1| OmpA family protein [Microcoleus chthonoplastes PCC 7420]
gi|196177756|gb|EDX72760.1| OmpA family protein [Microcoleus chthonoplastes PCC 7420]
Length = 727
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 1/120 (0%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSS 98
+Q+ + V +V F I P VL + + E ++GH D S +
Sbjct: 592 VQQPLTLRVPRNVHFALDRADISPESAAVLDQVAAVLQEYPFLTIELQGHTDPRASAAYN 651
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
AL RRA AV NY + +G+ RM + S+G+ G YA++RR + + R
Sbjct: 652 QALARRRALAVRNYLLRQGVDPGRMTIRSFGESQRRTTGSGVVDYARDRRVEIIFQDLRG 711
>gi|78047517|ref|YP_363692.1| flagellar motor protein MotD [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78035947|emb|CAJ23638.1| flagellar motor protein MotB [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 324
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 44/121 (36%), Gaps = 4/121 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ + F T S ++ LS L S L +EG+ D S+
Sbjct: 158 IEVEINSDILFGTGSATLAGGARGTLSTLASVLRDAPNGVRVEGYTDNQPIATAQFPSNW 217
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
L RA +V + F GI+ R+ + YG+ E NRR ++ + A
Sbjct: 218 ELSAARAASVVHLFADDGIAPQRLAMVGYGEFRARADNSTEAGRNANRRVVLIILADSAG 277
Query: 160 T 160
+
Sbjct: 278 S 278
>gi|319647377|ref|ZP_08001599.1| YtxE protein [Bacillus sp. BT1B_CT2]
gi|317390724|gb|EFV71529.1| YtxE protein [Bacillus sp. BT1B_CT2]
Length = 229
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 43/124 (34%), Gaps = 5/124 (4%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+ + + ++V FD+ ++ +L + L+ +EGH D
Sbjct: 103 IAAKRDERGVILVLQEAVLFDSGKADLKDQAHPLLHKIAVLLKSVSNPIRVEGHTDSRPI 162
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
S+ L RA V YF ++ +SR Y P E +NRR
Sbjct: 163 STYRFPSNWELSAARASTVIGYFTSKEKLDSSRFLAIGYADTKPVRDNRTESHMKENRRV 222
Query: 150 IVFL 153
+ +
Sbjct: 223 EIVI 226
>gi|238764428|ref|ZP_04625377.1| hypothetical protein ykris0001_27500 [Yersinia kristensenii ATCC
33638]
gi|238697344|gb|EEP90112.1| hypothetical protein ykris0001_27500 [Yersinia kristensenii ATCC
33638]
Length = 538
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Query: 53 FFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FDT Y ++P ++L + L K ++ GH D G ++ L L+RA A+ +
Sbjct: 421 LFDTGKYQLKPGSTKMLVSALIDIRAKPGWLIVVAGHTDITGDAGANQTLSLKRAEALRD 480
Query: 112 Y-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +S + V YG P + A NRR + L
Sbjct: 481 WMLSTSDVSPTCFAVQGYGATRPIATNESTEGRALNRRVEISL 523
>gi|197124092|ref|YP_002136043.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K]
gi|196173941|gb|ACG74914.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K]
Length = 386
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 49/141 (34%), Gaps = 7/141 (4%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVF------FDTSSYSIRPADIQVLSNLG 73
G+ + D + V + + VG + + P+ +L L
Sbjct: 242 GVADPDDRCPGQAGVAADGCPRAYRLLEVGRDRIALREPVRFGARDDLLPSSAVLLDELA 301
Query: 74 SWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
L H +E H D G +S L RA AV RGI A R++ +G E
Sbjct: 302 QALRDHPRLRVAVEVHTDGAGEAAASKRLSQARAEAVRAALAGRGIEAERVEAKGFGAEH 361
Query: 133 PSVYGHDEDAYAKNRRAIVFL 153
P A+NRR + +
Sbjct: 362 PIASNKTARGRAQNRRTEIRI 382
>gi|197117628|ref|YP_002138055.1| OmpA family outer membrane protein [Geobacter bemidjiensis Bem]
gi|197086988|gb|ACH38259.1| OmpA family outer membrane protein, OprF domain-containing protein
[Geobacter bemidjiensis Bem]
Length = 434
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 52/134 (38%), Gaps = 2/134 (1%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LE 77
+ I+ V+ + + S ++ FDT+ ++P L L + E
Sbjct: 293 ANSAAKVAVIAPAPVVVAPPAPAPKLCSPAVINIQFDTNKADLKPQYRPELKALADFLNE 352
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVY 136
+ +IEGH D +G + ++ L RA + N + R+K YG P
Sbjct: 353 FPNATGVIEGHTDNVGPKALNMKLSQSRADTIRNSLIKEFGIAPERIKAVGYGPTKPVAS 412
Query: 137 GHDEDAYAKNRRAI 150
D+ AKNRR
Sbjct: 413 NKDKAGKAKNRRIE 426
>gi|85715944|ref|ZP_01046921.1| hypothetical protein NB311A_14045 [Nitrobacter sp. Nb-311A]
gi|85697142|gb|EAQ35023.1| hypothetical protein NB311A_14045 [Nitrobacter sp. Nb-311A]
Length = 314
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 49/142 (34%), Gaps = 5/142 (3%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL 72
++++ D + K+ + + ++FDT I+P L +
Sbjct: 174 FAQLTVAERDAMQNKMIDAAAMAKGLGESGHIALY---GIYFDTDKAVIKPESRPTLDQI 230
Query: 73 GSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGK 130
L + I GH D G+ ++ L RRA AV I+ +R+ G
Sbjct: 231 AKLLSGQPGFNVYIVGHTDSQGTPAHNLELSRRRAEAVAEDLVRTYKIAKARLNTAGVGF 290
Query: 131 EMPSVYGHDEDAYAKNRRAIVF 152
P + A NRR +
Sbjct: 291 LAPVGSNGTDAGRALNRRVELV 312
>gi|52081472|ref|YP_080263.1| flagellar motor protein MotS [Bacillus licheniformis ATCC 14580]
gi|52786848|ref|YP_092677.1| flagellar motor protein MotS [Bacillus licheniformis ATCC 14580]
gi|52004683|gb|AAU24625.1| YtxE [Bacillus licheniformis ATCC 14580]
gi|52349350|gb|AAU41984.1| YtxE [Bacillus licheniformis ATCC 14580]
Length = 229
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 43/124 (34%), Gaps = 5/124 (4%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+ + + ++V FD+ ++ +L + L+ +EGH D
Sbjct: 103 IAAKRDERGVILVLQEAVLFDSGKADLKDQAHPLLHKIAVLLKSVSNPIRVEGHTDSRPI 162
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
S+ L RA V YF ++ +SR Y P E +NRR
Sbjct: 163 STYRFPSNWELSAARASTVIGYFTSKEKLDSSRFLAIGYADTKPVRDNRTESHMKENRRV 222
Query: 150 IVFL 153
+ +
Sbjct: 223 EIVI 226
>gi|78223039|ref|YP_384786.1| OmpA/MotB [Geobacter metallireducens GS-15]
gi|78194294|gb|ABB32061.1| OmpA/MotB [Geobacter metallireducens GS-15]
Length = 523
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 4/134 (2%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH- 79
+ + +++S S++ D V FD +S+ + +S + + K
Sbjct: 383 VKGQNVQVASARDGDIADSMKVYRKFRFPD-VTFDFDQWSLSAEGKKSISEVAELVRKDT 441
Query: 80 -DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYG 137
++G+ D +GS + ++ L L+RA +V +Y VAR I A+++ + GK P
Sbjct: 442 KWVYLRVDGYTDNIGSTDYNMDLSLKRAVSVASYLVAREGIDAAKIFIKGLGKSKPLADN 501
Query: 138 HDEDAYAKNRRAIV 151
D NRR +
Sbjct: 502 ATSDGRKLNRRCEI 515
>gi|120552993|ref|YP_957344.1| OmpA/MotB domain-containing protein [Marinobacter aquaeolei VT8]
gi|120322842|gb|ABM17157.1| OmpA/MotB domain protein [Marinobacter aquaeolei VT8]
Length = 277
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 58/146 (39%), Gaps = 5/146 (3%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
++ ++G + + L+ + ++Q + F + +I+P I ++ + S
Sbjct: 114 VLDLAGRLVRELEEEVASETLHVNYDEDQVVIRFSEEATFRSGDATIKPEMIPIIERVVS 173
Query: 75 WLEKHDCDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFV-ARGISASRMKVTSYG 129
L D ++ GH+D+ S+ L RA +V + V R I A R+
Sbjct: 174 VLSACSGDVVVSGHSDDRPISSSQYRSNWDLSAARAVSVVHELVLNRDIPAERVVAAGRA 233
Query: 130 KEMPSVYGHDEDAYAKNRRAIVFLKG 155
+ P + A NRR + ++
Sbjct: 234 ETRPLAPNTSPENRAINRRVEIAIRN 259
>gi|254182815|ref|ZP_04889408.1| OmpA domain protein [Burkholderia pseudomallei 1655]
gi|184213349|gb|EDU10392.1| OmpA domain protein [Burkholderia pseudomallei 1655]
Length = 421
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 43/127 (33%), Gaps = 4/127 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
L+ + S + F + + PA ++ + + + K + G+ D
Sbjct: 293 AAGTLSVEENARRSSVTFRGDAMFAPGAAGVNPAMGPLIRKIAAEIAKVPGKVTVRGYTD 352
Query: 91 ELGSRNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
++ A L RA V + G+ ASR++ G P A N
Sbjct: 353 NQPIKSRQFASNEALSEERATQVMQMLQSAGVPASRLEALGKGGAAPIGDNRTPQGRALN 412
Query: 147 RRAIVFL 153
RR + +
Sbjct: 413 RRVEITV 419
>gi|229132541|ref|ZP_04261390.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST196]
gi|228650887|gb|EEL06873.1| OmpA/MotB domain protein [Bacillus cereus BDRD-ST196]
Length = 225
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 52/127 (40%), Gaps = 5/127 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ +N S + D++ FDT +++P +V+S L + + ++EGH D
Sbjct: 98 SQVNVYREDTGVSIVIVDNLIFDTGDANVKPEAKEVISQLVGFFQSVPNPIVVEGHTDSR 157
Query: 93 GSRNS----SIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
N + L RA + ++ + + R+ Y P + KNR
Sbjct: 158 PIHNEKFPSNWELSSARAANMIHHLIEVYNVDDKRLAAVGYADTKPVESNDSPQNWEKNR 217
Query: 148 RAIVFLK 154
R ++++K
Sbjct: 218 RVVIYIK 224
>gi|313205418|ref|YP_004044075.1| ompa/motb domain protein [Paludibacter propionicigenes WB4]
gi|312444734|gb|ADQ81090.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4]
Length = 598
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+ FD+ ++ +L+ + ++ + GH D G+ ++ L RA AV
Sbjct: 493 IKFDSGKDKLKKRSYTILNEIAKELIKNPAYFIEVHGHTDSKGNSRANKLLSELRASAVR 552
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
NY + RG+ +R+K YG +MP NRR +
Sbjct: 553 NYLIRRGVDGNRIKSVGYGDKMPVATNKTVKGRTLNRRVEFNV 595
>gi|316936265|ref|YP_004111247.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
DX-1]
gi|315603979|gb|ADU46514.1| OmpA/MotB domain protein [Rhodopseudomonas palustris DX-1]
Length = 464
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 51/126 (40%), Gaps = 1/126 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGH 88
+ V Q +V FD++S I +L L + + I GH
Sbjct: 339 AAAPVDASVCQQLFNGLLAKTTVQFDSASAGISKDSAGLLDRLIETAMRCPNARIEIAGH 398
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D G + +L +RA AV +Y V G++ R++ YG ++P + AKNRR
Sbjct: 399 TDSDGDDAFNQSLSEKRARAVVDYMVRAGVTPERLQAFGYGSKIPLSGNDSDAGKAKNRR 458
Query: 149 AIVFLK 154
++
Sbjct: 459 IDFVVR 464
>gi|89093920|ref|ZP_01166865.1| OmpA/MotB [Oceanospirillum sp. MED92]
gi|89081806|gb|EAR61033.1| OmpA/MotB [Oceanospirillum sp. MED92]
Length = 265
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 46/134 (34%), Gaps = 5/134 (3%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFL 84
+ D + + S+ V FD S + ++ + D
Sbjct: 127 QAAINSDMAEIGTPKDGKLVISLKGDVVFDPGSAEFHAEMMTTFDSIVLLMKKNPDYKLR 186
Query: 85 IEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
I GH D + S+ L RA V Y V GI R+ T YG+ +P
Sbjct: 187 INGHTDNIPIQTTRFPSNWDLSAIRATNVLRYMVRGGIDLERVTATGYGESVPLESNRTL 246
Query: 141 DAYAKNRRAIVFLK 154
+ AKNRR L+
Sbjct: 247 EGRAKNRRLEFVLE 260
>gi|297184220|gb|ADI20338.1| outer membrane protein and related peptidoglycan-associated
(lipo)proteins [uncultured alpha proteobacterium
EB080_L27A02]
Length = 618
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 40/106 (37%), Gaps = 1/106 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAY 107
+ F+ I ++ V+ ++ L F I+GH D GS + L RA
Sbjct: 498 NTKIRFEPGKVIINDDNLTVIKSIADVLRTCPEAKFEIQGHTDSSGSEELNQNLSQSRAE 557
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV + R + S + YG P E+ NRR + L
Sbjct: 558 AVLFELLNRRVLTSGISAKGYGSISPIADNKTEEGREINRRIEIKL 603
>gi|294139328|ref|YP_003555306.1| OmpA family protein [Shewanella violacea DSS12]
gi|293325797|dbj|BAJ00528.1| OmpA family protein [Shewanella violacea DSS12]
Length = 277
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 48/119 (40%), Gaps = 2/119 (1%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRN 96
+ Q + + F S + V+ + ++L+ H F + GH D+LG ++
Sbjct: 155 TDKIAQTGHVALEGLLFKFDSDEMLLEATPVVEVVATYLKSHPKQSFYVIGHTDDLGKQS 214
Query: 97 SSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ L +RA AV ++ +++ G+ P ++ NRR + L+
Sbjct: 215 YNQVLSNKRAKAVVKQLLSVYKVPKSQLEAKGIGEYSPVANNSNDAGQKLNRRVELVLR 273
>gi|288800219|ref|ZP_06405677.1| OmpA family protein [Prevotella sp. oral taxon 299 str. F0039]
gi|288332432|gb|EFC70912.1| OmpA family protein [Prevotella sp. oral taxon 299 str. F0039]
Length = 283
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 48/114 (42%), Gaps = 6/114 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADE----LGSRNSSIA 100
S+ D++ + + SY I + LS + + + D D LIEG+ D + ++
Sbjct: 150 ISLADNMLYKSGSYEINDRAAETLSKIAKIITDYKDYDVLIEGNTDNVPIARENIRNNWD 209
Query: 101 LGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V Y ++ R+ G+ P + E +NRR + +
Sbjct: 210 LSCLRASSVVQYLQTHYGVNPKRLTAGGRGEYNPIANNNTELGKQRNRRTQIII 263
>gi|237737904|ref|ZP_04568385.1| outer membrane protein OprF [Fusobacterium mortiferum ATCC 9817]
gi|229419784|gb|EEO34831.1| outer membrane protein OprF [Fusobacterium mortiferum ATCC 9817]
Length = 1511
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 50/132 (37%), Gaps = 3/132 (2%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--F 83
++ + + SS ++ S ++ +F+ + +V+ + + +
Sbjct: 1378 NTLNDLNPMNIVSSSKKDSSITLRTKSYFEFDKAELNNNSKKVIEKFSEEINRDNLKGKI 1437
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDA 142
IEG+ D +G + + L L RA V + ++ ++ G P E
Sbjct: 1438 KIEGYTDNVGKSSYNEKLSLERATKVAEELKKQVKNSDTEYEILGKGASNPIGNNETEVG 1497
Query: 143 YAKNRRAIVFLK 154
AKNRR + +
Sbjct: 1498 RAKNRRVEIEFQ 1509
>gi|114771339|ref|ZP_01448759.1| OmpA domain protein [alpha proteobacterium HTCC2255]
gi|114548264|gb|EAU51151.1| OmpA domain protein [alpha proteobacterium HTCC2255]
Length = 618
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 40/106 (37%), Gaps = 1/106 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAY 107
+ F+ I ++ V+ ++ L F I+GH D GS + L RA
Sbjct: 498 NTKIRFEPGKVIINDDNLTVIKSIADVLRTCPEAKFEIQGHTDSSGSEELNQNLSQSRAE 557
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV + R + S + YG P E+ NRR + L
Sbjct: 558 AVLFELLNRRVLTSGISAKGYGSISPIADNKTEEGREINRRIEIKL 603
>gi|194337429|ref|YP_002019223.1| OmpA/MotB domain protein [Pelodictyon phaeoclathratiforme BU-1]
gi|194309906|gb|ACF44606.1| OmpA/MotB domain protein [Pelodictyon phaeoclathratiforme BU-1]
Length = 337
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 54/139 (38%), Gaps = 6/139 (4%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDS----VFFDTSSYSIRPADIQVLSNLGSW 75
+D ++T+ V ++ Q S+VG ++FD + + I+P L +
Sbjct: 197 AVDIIETQPMVQKMVTVTAAEMSQSLSAVGKVALYGIYFDPNKWDIKPESRPALKEIAIL 256
Query: 76 -LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMP 133
++ + GH D +G ++ L RRA AV V ++ R+ P
Sbjct: 257 LNKQPTLRLHVVGHTDNVGGYEANTVLSKRRAEAVAASLVKDFGISALRLTANGAAYLAP 316
Query: 134 SVYGHDEDAYAKNRRAIVF 152
E AKNRR +
Sbjct: 317 VASNSTEAGRAKNRRVELV 335
>gi|262395314|ref|YP_003287167.1| Flagellar motor rotation protein MotB [Vibrio sp. Ex25]
gi|262338908|gb|ACY52702.1| Flagellar motor rotation protein MotB [Vibrio sp. Ex25]
Length = 430
Score = 69.8 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 48/121 (39%), Gaps = 4/121 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+N LQ++ S+ F++ S + V+S L LE ++ GH D+
Sbjct: 304 INVEPLQDRVRISLKSQDLFESGSADVVAYIQPVISKLARTLESTQGKIIVTGHTDDRPI 363
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
S+ L L RA A+ ++ R+ G P V + ++ A NRR
Sbjct: 364 FTSKYPSNWHLSLARATAMSEQLISNSTLEGRVIPEGLGDARPLVENNSDENRAINRRIE 423
Query: 151 V 151
+
Sbjct: 424 I 424
>gi|54298967|ref|YP_125336.1| hypothetical protein lpp3034 [Legionella pneumophila str. Paris]
gi|53752752|emb|CAH14187.1| hypothetical protein lpp3034 [Legionella pneumophila str. Paris]
Length = 294
Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
Query: 46 SSVGDSVF-FDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALG 102
V +SVF F S + AD L + +++ I GHAD+ G + + A+
Sbjct: 181 EDVKESVFHFGVDSKLLSDADKAQLQRIAQYVDADVQIDVIKIIGHADDSGRKGYNNAIS 240
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA +V NY + G+ ++ +T G P ++ A NRR +V L
Sbjct: 241 QYRAESVKNYLIRLGVPQRKLSITWVGALQPIARNDTDEGRAANRRVVVTL 291
>gi|315607338|ref|ZP_07882338.1| OmpA family protein [Prevotella buccae ATCC 33574]
gi|315251041|gb|EFU31030.1| OmpA family protein [Prevotella buccae ATCC 33574]
Length = 284
Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 48/119 (40%), Gaps = 11/119 (9%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADE---------LGSR 95
S+ D++ + + SY I + LS + ++ D + LIEG+ D + +
Sbjct: 148 ISLADNMLYKSGSYEINDRAEETLSKIAKIIMDYKDYEVLIEGNTDNVPVNTDSPKMKNI 207
Query: 96 NSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L RA +V Y R + R+ G+ P E +NRR + +
Sbjct: 208 RNNWDLSALRASSVVQYLQNRYGVDPKRLTAGGRGEYNPVATNSTELGKQRNRRTQIII 266
>gi|311696643|gb|ADP99516.1| flagellar motor protein MotB [marine bacterium HP15]
Length = 277
Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 50/134 (37%), Gaps = 5/134 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
L+ + Q Q + F + +I+P I ++ + + L D L+ G+ D
Sbjct: 130 ASEALSVNYDQNQVVIRFSEEATFRSGEAAIKPEMIPIIERVVNVLSACTGDVLVSGYTD 189
Query: 91 ELGS----RNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ S+ L RA +V + + R + A R+ + P + A
Sbjct: 190 DRPISSDRYRSNWDLSAARAVSVVHELVMNRQVPADRVVAAGRAETNPLAPNDSPENRAL 249
Query: 146 NRRAIVFLKGCRAN 159
NRR + ++ N
Sbjct: 250 NRRVEIAIRNPECN 263
>gi|262066137|ref|ZP_06025749.1| fibronectin-binding protein [Fusobacterium periodonticum ATCC
33693]
gi|291380232|gb|EFE87750.1| fibronectin-binding protein [Fusobacterium periodonticum ATCC
33693]
Length = 93
Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 65 DIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
++L+NL ++E+++ + +EGH D +GS +I L RRA AV + G++ R+
Sbjct: 1 YFEMLNNLKDFIEQNNYEVTLEGHTDSIGSNQYNIGLSRRRAEAVKAKLIEFGLAEERIV 60
Query: 125 -VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ + G+E P + +NRR L
Sbjct: 61 GIEAKGEEYPVATNETPEGRLQNRRVEFRL 90
>gi|322832273|ref|YP_004212300.1| OmpA/MotB domain protein [Rahnella sp. Y9602]
gi|321167474|gb|ADW73173.1| OmpA/MotB domain protein [Rahnella sp. Y9602]
Length = 358
Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 12/128 (9%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDCDFLIEGHADELGSRNSS 98
E ++ V F+ + +++P Q L L S ++ D ++ G+ D +GS +
Sbjct: 223 ETKKFTLKSDVLFNFNKATLKPEGQQALDQLYSQLSSIDPKDGSVIVLGYTDRIGSEQYN 282
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRA 149
L +RA +V +Y V++GI A+++ GK P A +RR
Sbjct: 283 QKLSEQRAQSVVDYLVSKGIPANKISAQGQGKSNPVTGSTCDSVKGRAALIDCLAPDRRV 342
Query: 150 IVFLKGCR 157
+ +KG +
Sbjct: 343 EIEVKGYK 350
>gi|269962895|ref|ZP_06177235.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269832449|gb|EEZ86568.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 301
Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 56/158 (35%), Gaps = 9/158 (5%)
Query: 1 MQYSTIFII-LSAITMMSISGIDN-------LDTKISSPDTVLNESSLQEQFSSSVGDSV 52
M+ + + + A +++ D + L L Q + +
Sbjct: 1 MKTTIRLLSGMIAGAILAGCSADAYVSQENREKFADVNVSKFLISECLAPQREIHIAVAE 60
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FD IR AD L ++ I GH D GS + L +RRA +V Y
Sbjct: 61 HFDFDKSIIREADAVSLDAFIRDIQGLSGRITIVGHTDFKGSDEYNEKLSMRRAESVEAY 120
Query: 113 FVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
+ +V +G+ P G + A A+NRRA
Sbjct: 121 LQQQLDPEQYDWEVKHFGESQPLALGKSDQARAENRRA 158
Score = 59.4 bits (142), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FD ++P D+ L + + L+ + ++ GH D++GS + + L RRA V Y
Sbjct: 190 HFDFDKSELKPEDLSQLDDFIAKLQGLEGSIMVAGHTDQVGSLSYNEELAERRAQTVVAY 249
Query: 113 FVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ + +V ++G+ P + +A A NRRA + K
Sbjct: 250 LKTKLDPSQFVWEVKAFGELQPVINEESPEANALNRRAFIVFK 292
>gi|256425427|ref|YP_003126080.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
gi|256040335|gb|ACU63879.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
Length = 285
Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 47/114 (41%), Gaps = 6/114 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRN----SSIA 100
+ D + F++ SY + P +VL + L + D +F++EGH D + +
Sbjct: 157 IDISDKMLFESGSYDVTPKAKEVLGKVAKVLLNQPDIEFMVEGHTDSNPYKKGVLLDNWD 216
Query: 101 LGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L ++RA AV I + + + +P + A NRR + +
Sbjct: 217 LSVKRATAVTRVLQNDYNIPPAHITAAGRSEYLPIASNDTPEGRATNRRTRIVI 270
>gi|311746921|ref|ZP_07720706.1| putative outer membrane protein, OmpA family [Algoriphagus sp. PR1]
gi|126578612|gb|EAZ82776.1| putative outer membrane protein, OmpA family [Algoriphagus sp. PR1]
Length = 562
Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 48/114 (42%), Gaps = 2/114 (1%)
Query: 42 EQFSSSVGDSVFFDTSSYSIR-PADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSI 99
E S + ++V F + + VLS L + E I GH D G + +
Sbjct: 447 ESGSVLLLENVNFKRGTAELEGEETEAVLSELAEFLSENSSVKLRINGHTDGGGDPSLNK 506
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L L RA +V +Y V G++ +++ +G P E +KNRR + +
Sbjct: 507 GLSLDRARSVRDYLVDHGVTFENLRIAGWGGTRPIASNATESGRSKNRRVELEV 560
>gi|85373329|ref|YP_457391.1| peptidoglycan-associated protein [Erythrobacter litoralis HTCC2594]
gi|84786412|gb|ABC62594.1| peptidoglycan-associated protein [Erythrobacter litoralis HTCC2594]
Length = 167
Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/132 (33%), Positives = 62/132 (46%), Gaps = 1/132 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
D + S + ++FDT ++I D L W +
Sbjct: 33 DAPPASTGQTSGIAPGSQADFMQQMGGKEIIYFDTDRFNIDDIDAAALQQQAQWLSQYPG 92
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
IEGHADE G+R ++ALG RRA A NY + GI SR+ V SYG+E P G D+
Sbjct: 93 KRATIEGHADERGTREYNLALGERRANAAKNYLASLGIDTSRLSVISYGEERPVALGSDQ 152
Query: 141 DAYAKNRRAIVF 152
A+++NRRA+
Sbjct: 153 AAWSQNRRAVTV 164
>gi|24375768|ref|NP_719811.1| flagellar motor protein MotB [Shewanella oneidensis MR-1]
gi|24350713|gb|AAN57255.1|AE015861_7 chemotaxis motB protein [Shewanella oneidensis MR-1]
Length = 275
Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 50/127 (39%), Gaps = 7/127 (5%)
Query: 39 SLQEQFSSSVGDS-VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE---LGS 94
+ + +GD+ FF + S I+P I ++ +G + +I GH D +
Sbjct: 142 EVSDNLIIRIGDNNTFFASGSAFIQPKFIPLIDKIGEVIASVPGRVVIAGHTDATLPMEI 201
Query: 95 RNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA AV +G++ SR+ V P + KNRR + L
Sbjct: 202 YADNWDLSSLRATAVVRIMTKNKGVNPSRIIVQGLADTQPRFQNDTPEHRQKNRRIEIIL 261
Query: 154 KGCRANT 160
+ NT
Sbjct: 262 --NQGNT 266
>gi|114563969|ref|YP_751483.1| OmpA/MotB domain-containing protein [Shewanella frigidimarina NCIMB
400]
gi|114335262|gb|ABI72644.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400]
Length = 215
Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 42/110 (38%), Gaps = 2/110 (1%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRR 105
S+ V+FD + L + ++ + +EGH D +GS + +L L+R
Sbjct: 104 SILQPVYFDFDKSVVLLTQRPTLVRVQQYIEQHPQVAIRLEGHTDNIGSDAVNRSLSLKR 163
Query: 106 AYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
A + + V + +++ + P + +NRR +
Sbjct: 164 AATIKDLLVNEYQFQPTSIEIVGMSNKNPVADNATIEGRQRNRRVEFIIS 213
>gi|84501383|ref|ZP_00999588.1| hypothetical protein OB2597_13498 [Oceanicola batsensis HTCC2597]
gi|84390674|gb|EAQ03162.1| hypothetical protein OB2597_13498 [Oceanicola batsensis HTCC2597]
Length = 467
Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 45/114 (39%), Gaps = 4/114 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ + S F + S ++P Q L + L + + ++ GH+D + S++
Sbjct: 348 ITIRIAGSNMFGSGSDRLQPEFDQPLERVAQALTETEGPVIVVGHSDNVPIRSSRFPSNM 407
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L L RA +V +R++ + P + A+NRR + L
Sbjct: 408 HLSLARAESVMQKLAGLIEDPTRLQSEGRAAKEPIDTNDTREGRARNRRIEIVL 461
>gi|152993346|ref|YP_001359067.1| peptidoglycan-associated lipoprotein [Sulfurovum sp. NBC37-1]
gi|151425207|dbj|BAF72710.1| peptidoglycan-associated lipoprotein [Sulfurovum sp. NBC37-1]
Length = 172
Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 3/134 (2%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
T+I+ ++E+ +S D SV+F YSI A +S S +
Sbjct: 37 TDATEITGDTVTVDENGAGGSLGNSSADGFTSVYFTFDDYSISGAMQSKISADASRAAQT 96
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+EG+ DE G+ + ALGL+RA AV + A G+ +RM + SYG+ P
Sbjct: 97 SGKIKVEGNCDEFGTDEYNYALGLKRAKAVKDALRAEGVDTARMVMVSYGESNPVCSSPT 156
Query: 140 EDAYAKNRRAIVFL 153
+ YA+NRR + L
Sbjct: 157 DSCYARNRRVDLRL 170
>gi|148977601|ref|ZP_01814177.1| sodium-type flagellar protein MotY precursor [Vibrionales bacterium
SWAT-3]
gi|145963116|gb|EDK28384.1| sodium-type flagellar protein MotY precursor [Vibrionales bacterium
SWAT-3]
Length = 284
Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYA 108
+ +D +S + + + LS + ++ + L+ + D S+ S L RRA +
Sbjct: 175 ILHYDRNSDQLNKSSRKRLSQIAEYVRYNQDIDLVLVATYTDSADSKGISQNLSERRAES 234
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ YF + G+ R++V YGK P KNRR ++ L
Sbjct: 235 LREYFKSLGLPEDRIQVQGYGKRRPIADNSSPIGKDKNRRVVISL 279
>gi|308048595|ref|YP_003912161.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
gi|307630785|gb|ADN75087.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
Length = 314
Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 51/132 (38%), Gaps = 5/132 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
D + SL +Q + + F S ++P V+ +G+ L+ + GH D
Sbjct: 173 DGAIEVESLGQQIIIRIREKGAFPAGSAFLQPRFRPVIHAVGNLLKDVPGIISVTGHTDN 232
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S+ L +RA +V + V G RM++ + P V + +N
Sbjct: 233 TTIDNELYRSNWELSTQRAVSVAHELVKVEGFDPGRMELRGVAENEPLVSNDTWEGRVRN 292
Query: 147 RRAIVFLKGCRA 158
RR + + +A
Sbjct: 293 RRVEITINQGKA 304
>gi|119503684|ref|ZP_01625767.1| Flagellar motor protein [marine gamma proteobacterium HTCC2080]
gi|119460746|gb|EAW41838.1| Flagellar motor protein [marine gamma proteobacterium HTCC2080]
Length = 312
Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 46/128 (35%), Gaps = 5/128 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
++ S + + F + S + ++VL G L + IEGH D
Sbjct: 151 AGQIDVESEGRTIVIRIREKGSFPSGSAQLDIGFLEVLDKTGFALNEIKGLIFIEGHTDN 210
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ S+ L R+ AV + + R+ ++ + P + A+N
Sbjct: 211 VPINTARYGSNWDLSAARSVAVAERLLDGPKMDPIRLTISGHADTRPQAPNQSWEGRAQN 270
Query: 147 RRAIVFLK 154
RR V +K
Sbjct: 271 RRVEVVVK 278
>gi|86159756|ref|YP_466541.1| OmpA/MotB family outer membrane protein [Anaeromyxobacter
dehalogenans 2CP-C]
gi|85776267|gb|ABC83104.1| outer membrane protein, OmpA/MotB family [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 242
Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 2/124 (1%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
E+S+ + + SV F ++ Q L L L++ L++G+ D
Sbjct: 119 AAAAPEASVPPECADVTAFSVHFAFDRSNLTADSQQNLQKLADCLKQAPAKRVLVQGNCD 178
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
E G+ ++ALG RRA A Y G+ ++ + SYG+E P E +AKNRR
Sbjct: 179 ERGTAQYNVALGNRRAEAAKKYLTDLGVGST-VDTVSYGEEKPVCSEATEACWAKNRRDD 237
Query: 151 VFLK 154
++
Sbjct: 238 FQIE 241
>gi|85711188|ref|ZP_01042248.1| flagellar motor protein [Idiomarina baltica OS145]
gi|85695101|gb|EAQ33039.1| flagellar motor protein [Idiomarina baltica OS145]
Length = 309
Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 46/132 (34%), Gaps = 5/132 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
L L +Q + ++ F S ++P V+ + L+ + I GH D
Sbjct: 168 AGSLELEQLGQQIIIRIKENGSFPEGSAFLQPQFKPVIREVAQALKDIPGEITISGHTDN 227
Query: 92 LG----SRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S L +RA AV + G SR+ Y P V + A N
Sbjct: 228 QPLVSEMYTSKWDLSAKRAVAVAEEMTSVDGFDQSRLVTMGYADTKPIVPNNSTSNRALN 287
Query: 147 RRAIVFLKGCRA 158
RR + + +A
Sbjct: 288 RRVDIAIMQGKA 299
>gi|85712856|ref|ZP_01043898.1| OprF [Idiomarina baltica OS145]
gi|85693320|gb|EAQ31276.1| OprF [Idiomarina baltica OS145]
Length = 362
Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 2/135 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-D 80
D + ++ E + V FD S +R ++ ++ + ++ +H
Sbjct: 218 DKCADTPRRYSVDADGCTMYENETVREQLLVEFDFDSSQVRKDAMEPIAEMAEFMNEHPQ 277
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHD 139
D I GH D++G + L RRA +V N + GISASR+ +G+ P V G
Sbjct: 278 LDLTIHGHTDKIGDAEYNQWLSQRRAESVKNVLVESYGISASRINTVGHGESQPKVKGDS 337
Query: 140 EDAYAKNRRAIVFLK 154
+NRR LK
Sbjct: 338 PADRQENRRIEAELK 352
>gi|298372894|ref|ZP_06982884.1| OmpA family protein [Bacteroidetes oral taxon 274 str. F0058]
gi|298275798|gb|EFI17349.1| OmpA family protein [Bacteroidetes oral taxon 274 str. F0058]
Length = 587
Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 56/138 (40%), Gaps = 6/138 (4%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD- 80
D D +S ++ + D+V +D + +IRP L L +L+ +
Sbjct: 448 DTYDPSKTSTVENNIYLKRVKKNEAIRLDNVHYDLNKATIRPDARPELDRLVKYLKDNPK 507
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV----- 135
+ H D GS + L +RA AV Y V +GI+ SR+K YG+
Sbjct: 508 IRVEMSSHTDSRGSDAYNQRLSQQRADAVKLYLVEKGIAPSRIKSVGYGETKLLNNCGNG 567
Query: 136 YGHDEDAYAKNRRAIVFL 153
E+ + NRR + +
Sbjct: 568 SNCTEEQHQLNRRTEMKV 585
>gi|148259380|ref|YP_001233507.1| OmpA/MotB domain-containing protein [Acidiphilium cryptum JF-5]
gi|326402601|ref|YP_004282682.1| outer membrane lipoprotein Omp16 [Acidiphilium multivorum AIU301]
gi|146401061|gb|ABQ29588.1| OmpA/MotB domain protein [Acidiphilium cryptum JF-5]
gi|325049462|dbj|BAJ79800.1| outer membrane lipoprotein Omp16 [Acidiphilium multivorum AIU301]
Length = 167
Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 1/137 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
++ ++Q + VGD FF + ++ AD L SW +
Sbjct: 24 TTAMATGSGATAAQSGPAPGSEQQLVADVGDRAFFGFNKSNLTGADKATLDRQASWLAKY 83
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ D LI G+AD G+ ++ALG RRA+A +Y VA+G++ASR++ SYGK G+
Sbjct: 84 PNVDVLIAGNADPRGTEAYNLALGARRAHAARDYLVAKGVAASRIQTVSYGKSCLVSPGN 143
Query: 139 DEDAYAKNRRAIVFLKG 155
E YA++R AI ++G
Sbjct: 144 TEQDYAQDRVAITSVQG 160
>gi|120553254|ref|YP_957605.1| flagellar motor protein MotB [Marinobacter aquaeolei VT8]
gi|120323103|gb|ABM17418.1| OmpA/MotB domain protein [Marinobacter aquaeolei VT8]
Length = 305
Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 53/132 (40%), Gaps = 5/132 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ + D +N S Q + + + F + S + +L ++ L D IE
Sbjct: 132 EPAILDGRINVSEDQRRIIIRIEEKGSFASGSAQLTWEFEGLLMDMAEVLADMPGDLAIE 191
Query: 87 GHADELGS----RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDED 141
GH D + S+ L RA AV N +AR + R++VT P V +
Sbjct: 192 GHTDNVPIRTERFYSNWDLSAARAAAVANVLLAREQVTPDRIRVTGLADTEPRVPNTSPE 251
Query: 142 AYAKNRRAIVFL 153
AKNRR + +
Sbjct: 252 NRAKNRRVEIVI 263
>gi|289640922|ref|ZP_06473092.1| OmpA/MotB domain protein [Frankia symbiont of Datisca glomerata]
gi|289509237|gb|EFD30166.1| OmpA/MotB domain protein [Frankia symbiont of Datisca glomerata]
Length = 394
Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/132 (25%), Positives = 49/132 (37%), Gaps = 2/132 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSV--GDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
DT P +SV + F T S + AD L + + L +
Sbjct: 258 SVTDTSAPQPAAGATTPQSVAGRLASVVATGRITFATDSSELTEADRVHLDRIAAVLRES 317
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ L+ GHAD G + L L RA A Y +G+SA ++ + E P
Sbjct: 318 ELSVLLAGHADARGPGVLNETLSLARARAAAAYLADQGVSADHLRAAGFASEHPVATNAT 377
Query: 140 EDAYAKNRRAIV 151
E A NRR +
Sbjct: 378 EAGRAANRRVEI 389
>gi|254450200|ref|ZP_05063637.1| OmpA domain protein [Octadecabacter antarcticus 238]
gi|198264606|gb|EDY88876.1| OmpA domain protein [Octadecabacter antarcticus 238]
Length = 656
Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 46/124 (37%), Gaps = 3/124 (2%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS---WLEKHDCDFLIEGH 88
V + + + G + F +SS + I+ ++ L + D + GH
Sbjct: 523 GDVDVAACAAQTLNILEGGQIGFLSSSARLDATSIRTINALAAVVLPCAAADLTLEVGGH 582
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D G ++ AL RA AV + RG+ + M +G P + A NRR
Sbjct: 583 TDSSGDELTNNALSQDRANAVRAALIVRGVPENAMTAFGFGPTQPITDNATPEGRAANRR 642
Query: 149 AIVF 152
+
Sbjct: 643 TDIT 646
>gi|146279022|ref|YP_001169181.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
17025]
gi|145557263|gb|ABP71876.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17025]
Length = 316
Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 50/128 (39%), Gaps = 2/128 (1%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIE 86
+ + + EQ S V + + F + S + L+ L WL++ +I
Sbjct: 186 VPEDPPQADLVARLEQSGSVVLEDLAFASGSADLEDRTYPALAELAEWLKQDPARQVVIV 245
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAK 145
GH D G +++L RA +V V+R ++ G P E+ ++
Sbjct: 246 GHTDASGGLEGNVSLSRARAASVRQRLVSRHGVPDAQVSAEGVGYLAPRASNRTEEGRSR 305
Query: 146 NRRAIVFL 153
NRR V L
Sbjct: 306 NRRVEVML 313
>gi|90408691|ref|ZP_01216841.1| putative outer membrane protein OmpA [Psychromonas sp. CNPT3]
gi|90310205|gb|EAS38340.1| putative outer membrane protein OmpA [Psychromonas sp. CNPT3]
Length = 415
Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/145 (23%), Positives = 64/145 (44%), Gaps = 4/145 (2%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVL 69
+ ++IS + I+ P V + + F + V F +S + ++
Sbjct: 253 FSAVAISAPLISEPIIAEPVIVTSVPVIAPVFVAKKTYFVTNALFSVNSSQFKTN-PDLI 311
Query: 70 SNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
+ L+ + + +I G++D LGS + + +RA V NY ++ GIS+SR+ V S G
Sbjct: 312 DLIMKSLQSKEGNIIITGYSDNLGSVKYNQWISEKRAKVVANYIISEGISSSRLIVKSEG 371
Query: 130 KEMPSVYGHDEDAYAKNRRAIVFLK 154
+ P A+NRR + +
Sbjct: 372 EFYPVASNKTATGRAENRRVELKFE 396
>gi|319760471|ref|YP_004124409.1| peptidoglycan-associated lipoprotein [Candidatus Blochmannia vafer
str. BVAF]
gi|318039185|gb|ADV33735.1| peptidoglycan-associated lipoprotein [Candidatus Blochmannia vafer
str. BVAF]
Length = 175
Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 68/122 (55%), Gaps = 1/122 (0%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIE 86
+S D ++N+ + + + ++F Y+I +L +L K+ +IE
Sbjct: 49 TNSIDNIINQPNKLNRQHLQSKNIIYFPLDQYNIPSVFFDILDVHAIFLRKNPLHHIIIE 108
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
GH DE G+ +I LG RRAY++ Y ++G+ ++++ SYGKE P +GH E++Y++N
Sbjct: 109 GHTDERGTPEYNIGLGERRAYSIKKYLQSKGVLSNQISTISYGKEKPVSFGHTEESYSQN 168
Query: 147 RR 148
RR
Sbjct: 169 RR 170
>gi|328946962|ref|YP_004364299.1| OmpA/MotB domain protein [Treponema succinifaciens DSM 2489]
gi|328447286|gb|AEB13002.1| OmpA/MotB domain protein [Treponema succinifaciens DSM 2489]
Length = 488
Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 1/105 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEK-HDCDFLIEGHADELGSRNSSIALGLRRAYA 108
++ F S + P + + L + L++ D FL+EGH +G + L + RA +
Sbjct: 382 QNLNFKPDSSELLPGENERLDQIAQVLKEVPDQMFLVEGHTASVGYEKGEMKLSVERANS 441
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V N + RGI + G P + AKNRR + +
Sbjct: 442 VANALIQRGIPREKFICKGSGGTKPIADNSTPEGKAKNRRVEITI 486
>gi|284032832|ref|YP_003382763.1| OmpA/MotB domain-containing protein [Kribbella flavida DSM 17836]
gi|283812125|gb|ADB33964.1| OmpA/MotB domain protein [Kribbella flavida DSM 17836]
Length = 327
Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 41/110 (37%), Gaps = 1/110 (0%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGL 103
+ + F + + + + + + L + GH D LG ++S+ L
Sbjct: 217 QLTSQHKIIFLSGTAIVNEKSRGSVVRVAALLRTCGTARVELAGHTDNLGDPSTSLPLSQ 276
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RRA AV V G+ A R+ YG+ P NRR + +
Sbjct: 277 RRADAVKATLVRLGVPAGRIISRGYGEFEPVASNRTSAGRIANRRVEIRV 326
>gi|300727657|ref|ZP_07061045.1| OmpA family protein [Prevotella bryantii B14]
gi|299775083|gb|EFI71687.1| OmpA family protein [Prevotella bryantii B14]
Length = 286
Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 11/119 (9%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHAD---------ELGSR 95
S+ D++ + + SY + Q LS + ++ + D D LIEG+ D + +
Sbjct: 148 ISLADNMLYKSGSYEVNDRAEQTLSKIAKIIKDYKDYDVLIEGNTDNVPVNTKAVSMKNI 207
Query: 96 NSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L RA +V Y I+ R+ G+ P E +NRR + +
Sbjct: 208 RNNWDLSALRASSVVQYLQDHYGINPKRLTAGGRGEYNPIATNDTELGKQRNRRTQIII 266
>gi|227540101|ref|ZP_03970150.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Sphingobacterium spiritivorum ATCC 33300]
gi|227239962|gb|EEI89977.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Sphingobacterium spiritivorum ATCC 33300]
Length = 671
Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 50/122 (40%), Gaps = 6/122 (4%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRN 96
+ E+ S +++++D +IR VL+ L L + + H D +
Sbjct: 547 QPVIEKGISFTLENIYYDLDKSNIREDAKPVLNQLVHTLRDNPSLKIELSSHTDSRATAK 606
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH-----DEDAYAKNRRAIV 151
++ L RA + +Y V++GI+ +R+ YG+ + + NRR +
Sbjct: 607 YNMKLSQNRAQSAVDYIVSQGIARNRIIAKGYGESRLINMCKDGVKCTDAEHQANRRTEI 666
Query: 152 FL 153
+
Sbjct: 667 KV 668
>gi|53802737|ref|YP_115490.1| outer membrane protein MopB [Methylococcus capsulatus str. Bath]
gi|4104020|gb|AAD01925.1| MopB [Methylococcus capsulatus]
gi|53756498|gb|AAU90789.1| outer membrane protein MopB [Methylococcus capsulatus str. Bath]
Length = 348
Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 3/108 (2%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAY 107
V F S + + ++L L + GH G+ ++ L +RRA+
Sbjct: 241 HGVNFKYDSAELTDSAKRILDETAENLILFPEKRDIEVAGHTSTEGTNEYNMRLSIRRAH 300
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+V +Y A+G++ +++ YG+E P V H E KNRR + G
Sbjct: 301 SVADYLKAKGVT-NQLYPKGYGEEYPLVPEHSEADREKNRRVELIWMG 347
>gi|326795346|ref|YP_004313166.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
gi|326546110|gb|ADZ91330.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
Length = 254
Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 56/150 (37%), Gaps = 5/150 (3%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
+ I+ + D+ + E+ + V + F++ + + + L
Sbjct: 104 VKEIANDTANKFAAENLDSQIAVFEDGEKITIRVDGASLFESGEADVLWSAEPIFEALYR 163
Query: 75 WLEKHD-CDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
+ + I+GH D + S+ L RA YF+ +GI RM T Y
Sbjct: 164 IFVTYPDYNISIKGHTDNIPINTTRFPSNWELSAIRATTTLRYFLEKGIPPERMTATGYA 223
Query: 130 KEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
+P V + A+NRRA L+ + N
Sbjct: 224 DVIPLVPNDTPEHRAQNRRAEFVLQRNKNN 253
>gi|255034413|ref|YP_003085034.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
18053]
gi|254947169|gb|ACT91869.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
Length = 248
Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 57/142 (40%), Gaps = 3/142 (2%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
A + ++ I+N + P N L++ +++ F + S + + ++
Sbjct: 108 ATKIFYLTPIENSTERAREPVIEQNIPVLEDDIRATLH---FPQSESDILPESGYELEIL 164
Query: 72 LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
G + + GH D++G ++ L R V Y V++ I +R++ +G +
Sbjct: 165 AGYLVRNAGSRIELMGHTDDVGDPFKNLLLSFDRVDEVRKYLVSKHIETTRIRGKGFGSD 224
Query: 132 MPSVYGHDEDAYAKNRRAIVFL 153
+P E NRR + +
Sbjct: 225 LPVAPNDCEANRRLNRRVEIRI 246
>gi|159045641|ref|YP_001534435.1| OmpA domain-containing protein [Dinoroseobacter shibae DFL 12]
gi|157913401|gb|ABV94834.1| OmpA domain protein [Dinoroseobacter shibae DFL 12]
Length = 617
Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 38/119 (31%), Gaps = 1/119 (0%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELG 93
E + + F+ S I ++ + ++ +F I GH D G
Sbjct: 480 TPEECYARIDAIQAEGKITFEPGSSQIAAEAEAIMDRIAQVLVDCSHVEFEIAGHTDNQG 539
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
++ L RA AV R I + YG+ MP + NRR
Sbjct: 540 REVMNLNLSQARADAVLAALSERRILTGNLVARGYGEAMPIADNSTAEGREANRRISFT 598
>gi|289662354|ref|ZP_06483935.1| flagellar motor protein MotD [Xanthomonas campestris pv. vasculorum
NCPPB702]
Length = 324
Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 44/121 (36%), Gaps = 4/121 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ + F T S ++ LS L S L +EG+ D S+
Sbjct: 158 IEVEINSDILFGTGSAALAGNARATLSTLASVLRDAPNGVRVEGYTDNQPIATAQFPSNW 217
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
L RA +V + F G++ R+ + YG+ E NRR ++ + A
Sbjct: 218 ELSAARAASVVHLFADDGVAPQRLAMVGYGEFRARADNSTEAGRNANRRVVLIILADSAG 277
Query: 160 T 160
+
Sbjct: 278 S 278
>gi|282848786|ref|ZP_06258180.1| OmpA family protein [Veillonella parvula ATCC 17745]
gi|294795118|ref|ZP_06760253.1| outer membrane porin F (Root adhesin) [Veillonella sp. 3_1_44]
gi|282581500|gb|EFB86889.1| OmpA family protein [Veillonella parvula ATCC 17745]
gi|294454480|gb|EFG22854.1| outer membrane porin F (Root adhesin) [Veillonella sp. 3_1_44]
Length = 345
Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 49/133 (36%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHD 80
+P + + + S++FD+ R L+ + + +
Sbjct: 211 APAPVYTPAPAPTVEAPAYKTPKLDYYVQSIYFDSDQDVARADQYPNLTAAVNAANQYSQ 270
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ G+AD + +IAL RR V Y V G+SA R+ + G P
Sbjct: 271 DQVKLMGNADTDANPQYNIALSERRVQHVAQYLVNHGVSADRLIGIANGDVKPVATNSTA 330
Query: 141 DAYAKNRRAIVFL 153
A+NRR V++
Sbjct: 331 AGKAENRRVDVYI 343
>gi|260768264|ref|ZP_05877198.1| outer membrane protein [Vibrio furnissii CIP 102972]
gi|260616294|gb|EEX41479.1| outer membrane protein [Vibrio furnissii CIP 102972]
Length = 176
Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 58/142 (40%), Gaps = 1/142 (0%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
++ D S + + + S+ + F SY I P + + +L
Sbjct: 20 VVNARDICPGTPSGAEIDNDGCGEVIRNSAKRQLHILFANDSYEINPVFADQIQAMAEFL 79
Query: 77 EKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+ + I+G+ ++G+ + L +RA AV ++ GIS R+++ +G+
Sbjct: 80 KTYQSASIEIQGYTSKVGTNEYNQELSQKRAEAVERKLLSYGISPKRVRIIGFGETRLLD 139
Query: 136 YGHDEDAYAKNRRAIVFLKGCR 157
G A+A NRR + G +
Sbjct: 140 DGDTNSAHAVNRRVTATVVGLK 161
>gi|160880837|ref|YP_001559805.1| OmpA/MotB domain-containing protein [Clostridium phytofermentans
ISDg]
gi|160429503|gb|ABX43066.1| OmpA/MotB domain protein [Clostridium phytofermentans ISDg]
Length = 275
Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 50/127 (39%), Gaps = 6/127 (4%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADE 91
+ + + + ++ S+ +D+ ++ + + S +G L+ + + GH D
Sbjct: 142 DIETDKTGGQYVLINISGSLLYDSGKAQLKSEALPIFSKVGDILKTYKGYRISVIGHTDN 201
Query: 92 LG----SRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ S+ L RA Y + +GI S ++ G+ P E +KN
Sbjct: 202 VPVTSGIYRSNKELSSARAINAAEYLIDVKGIDPSNIEWIGRGEYDPIADNSSEAGRSKN 261
Query: 147 RRAIVFL 153
RR + +
Sbjct: 262 RRIEIRI 268
>gi|149185364|ref|ZP_01863681.1| outer membrane protein [Erythrobacter sp. SD-21]
gi|148831475|gb|EDL49909.1| outer membrane protein [Erythrobacter sp. SD-21]
Length = 218
Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 57/148 (38%), Gaps = 7/148 (4%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+ + D + E L + ++ F + A L+ +
Sbjct: 34 AATADDGPRSIFREDPAEAGEGVLPAPTLPPLETTLSFADGMPELTEAVRAELATIVDSP 93
Query: 77 EKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+ ++ GH+D GS ++ RA AV ++FV GI +R+ V ++G++ P
Sbjct: 94 QMEAGGAIVLRGHSDSDGSDEDNLEASRERAEAVRDFFVENGIDEARITVIAFGEQNPLA 153
Query: 136 YGH------DEDAYAKNRRAIVFLKGCR 157
+E+ A NRR V ++ R
Sbjct: 154 PNALPDGSPNEEGRATNRRVEVTIETGR 181
>gi|87120689|ref|ZP_01076582.1| flagellar motor protein [Marinomonas sp. MED121]
gi|86163917|gb|EAQ65189.1| flagellar motor protein [Marinomonas sp. MED121]
Length = 292
Score = 69.4 bits (168), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 43/127 (33%), Gaps = 5/127 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ + + + + + F++ S + I ++ + L +EGH D +
Sbjct: 123 GTVEVETQERTITIRLKEKGSFESGSAELNFDFIPIIDMIRDVLIGIQGTIAVEGHTDNI 182
Query: 93 G----SRNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
S+ L RA +V A G R VT Y P A NR
Sbjct: 183 PVNSGRFGSNWQLSSARAISVAEELFATGQLEQKRFSVTGYADTRPLAPNDTFFNRASNR 242
Query: 148 RAIVFLK 154
R + +K
Sbjct: 243 RVELIIK 249
>gi|269797531|ref|YP_003311431.1| OmpA/MotB domain protein [Veillonella parvula DSM 2008]
gi|269094160|gb|ACZ24151.1| OmpA/MotB domain protein [Veillonella parvula DSM 2008]
Length = 345
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 49/133 (36%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHD 80
+P + + + S++FD+ R L+ + + +
Sbjct: 211 APAPVYTPAPAPTVEAPAYKTPKLDYYVQSIYFDSDQDVARADQYPNLTAAVNAANQYSQ 270
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ G+AD + +IAL RR V Y V G+SA R+ + G P
Sbjct: 271 DQVKLMGNADTDANPQYNIALSERRVQHVAQYLVNHGVSADRLIGIANGDVKPVATNSTA 330
Query: 141 DAYAKNRRAIVFL 153
A+NRR V++
Sbjct: 331 AGKAENRRVDVYI 343
>gi|312963035|ref|ZP_07777521.1| OmpA/MotB [Pseudomonas fluorescens WH6]
gi|311282804|gb|EFQ61399.1| OmpA/MotB [Pseudomonas fluorescens WH6]
Length = 163
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 47/139 (33%), Gaps = 6/139 (4%)
Query: 21 IDNLDTKISSPDTVLNESS-----LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
K +P V E ++ + V F + ++ P +++ +G
Sbjct: 22 CQTPPPKGLTPAQVAVLKQQGFELTDEGWAFGLSGKVLFGSDVETLNPPSTEIVQRIGKA 81
Query: 76 LEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
L ++GH D G + L LRRA +V G+ +++ G P
Sbjct: 82 LLGVGIERVRVDGHTDASGKEIYNQQLSLRRAKSVATVLTGVGMKEQNVQLRGLGSGEPV 141
Query: 135 VYGHDEDAYAKNRRAIVFL 153
+NRR + +
Sbjct: 142 ASNDTAAGRTENRRVSIVV 160
>gi|300824154|ref|ZP_07104273.1| outer membrane protein A [Escherichia coli MS 119-7]
gi|300925361|ref|ZP_07141248.1| outer membrane protein A [Escherichia coli MS 182-1]
gi|301327213|ref|ZP_07220475.1| outer membrane protein A [Escherichia coli MS 78-1]
gi|309795053|ref|ZP_07689473.1| outer membrane protein A [Escherichia coli MS 145-7]
gi|300418528|gb|EFK01839.1| outer membrane protein A [Escherichia coli MS 182-1]
gi|300523330|gb|EFK44399.1| outer membrane protein A [Escherichia coli MS 119-7]
gi|300846194|gb|EFK73954.1| outer membrane protein A [Escherichia coli MS 78-1]
gi|308121357|gb|EFO58619.1| outer membrane protein A [Escherichia coli MS 145-7]
Length = 358
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 60/158 (37%), Gaps = 12/158 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + +S + + ++ V F+ + +++P L
Sbjct: 193 GLLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLKSDVLFNFNKATLKPEGQAALDQ 252
Query: 72 LGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L S L + D ++ G+ D +GS + L RRA +V +Y +++GI A ++
Sbjct: 253 LYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRAQSVVDYLISKGIPADKISARGM 312
Query: 129 GKEMPS--VYGHDEDAYAK-------NRRAIVFLKGCR 157
G+ P + A +RR + +KG +
Sbjct: 313 GESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKGIK 350
>gi|300313316|ref|YP_003777408.1| lipoprotein [Herbaspirillum seropedicae SmR1]
gi|300076101|gb|ADJ65500.1| lipoprotein [Herbaspirillum seropedicae SmR1]
Length = 267
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
V F++ ++ P ++L + + + + I G+ D G R S+I+L L RA
Sbjct: 160 NRVVSFESGRATLTPEGKRILDEIAATMLQLKGRRVEIIGNTDNEGLRASNISLSLARAD 219
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV Y +G+ S + + G + P + A+NRR +
Sbjct: 220 AVKAYLSTKGVDDSLLTTSGQGPDRPVASNATSEGRARNRRIEFRI 265
>gi|281178081|dbj|BAI54411.1| outer membrane protein OmpA [Escherichia coli SE15]
gi|323190770|gb|EFZ76039.1| outer membrane protein A [Escherichia coli RN587/1]
Length = 350
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/158 (18%), Positives = 60/158 (37%), Gaps = 12/158 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + +S + + ++ V F + +++P L
Sbjct: 185 GMLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLKSDVLFTFNKATLKPEGQAALDQ 244
Query: 72 LGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L S L + D ++ G+ D +GS + AL RRA +V +Y +++GI A ++
Sbjct: 245 LYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQALSERRAQSVVDYLISKGIPADKISARGM 304
Query: 129 GKEMPS--VYGHDEDAYAK-------NRRAIVFLKGCR 157
G+ P + A +RR + +KG +
Sbjct: 305 GESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKGIK 342
>gi|255035577|ref|YP_003086198.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
18053]
gi|254948333|gb|ACT93033.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
Length = 433
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 2/105 (1%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYA 108
+ F+ +S I P L ++ L+++ I GH D GS S++ L +RRA A
Sbjct: 327 HGIQFNVNSDEILPLSYGALKDVAQVLQENPGVKVQIVGHTDADGSDESNVQLSMRRAEA 386
Query: 109 VFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
V A I +R++ G+ P A NRR
Sbjct: 387 VKKAMEAHFAIDGTRLQTDGKGESSPIDSNDTPTGKANNRRVEFI 431
>gi|171322789|ref|ZP_02911520.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
gi|171091861|gb|EDT37347.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
Length = 230
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 42/101 (41%), Gaps = 1/101 (0%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FDT + P L L S + G+ D +GS + ++ L RRA AV Y
Sbjct: 125 FDTDRADLTPIARDRLDRLISASRGVRVRTVTVNGYTDSVGSDDYNVGLSERRASAVDAY 184
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ G+SA R YGK P A+NRR V L
Sbjct: 185 LQSHGLSAGRFVGRGYGKADPVDSNETAVGRARNRRVEVRL 225
>gi|161503852|ref|YP_001570964.1| outer membrane protein A [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|160865199|gb|ABX21822.1| hypothetical protein SARI_01940 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 358
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/158 (18%), Positives = 60/158 (37%), Gaps = 12/158 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + +S + P + + ++ V F + +++P Q L
Sbjct: 193 GLLSVGVSYRFGQEEAAPMPAPTPAPAPEVQTKHFTLKSDVLFTFNKDNLKPEGKQALDQ 252
Query: 72 LGSWLE---KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L + L D ++ G D +GS + L +RA +V NY +++GI A ++
Sbjct: 253 LYNQLNNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRAQSVVNYLISKGIPADKISARGM 312
Query: 129 GKEMPS--VYGHDEDAYAK-------NRRAIVFLKGCR 157
G+ P + A +RR + +KG +
Sbjct: 313 GESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKGIK 350
>gi|312968985|ref|ZP_07783192.1| outer membrane protein A [Escherichia coli 2362-75]
gi|312286387|gb|EFR14300.1| outer membrane protein A [Escherichia coli 2362-75]
Length = 346
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F + +++P L L S L + D ++ G+ D +GS + AL
Sbjct: 216 TLKSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQALSE 275
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RRA +V +Y +++GI A ++ G+ P + A +RR + +K
Sbjct: 276 RRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVK 335
Query: 155 GCR 157
G +
Sbjct: 336 GIK 338
>gi|307552789|gb|ADN45564.1| outer membrane protein A [Escherichia coli ABU 83972]
Length = 350
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F + +++P L L S L + D ++ G+ D +GS + AL
Sbjct: 220 TLKSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQALSE 279
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RRA +V +Y +++GI A ++ G+ P + A +RR + +K
Sbjct: 280 RRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVK 339
Query: 155 GCR 157
G +
Sbjct: 340 GIK 342
>gi|224370727|ref|YP_002604891.1| MotB3 [Desulfobacterium autotrophicum HRM2]
gi|223693444|gb|ACN16727.1| MotB3 [Desulfobacterium autotrophicum HRM2]
Length = 272
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 47/131 (35%), Gaps = 5/131 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
D+ E S+ +FFD ++P L +G L+++ + GH D+
Sbjct: 126 DSASVELVADRAVRISLAGDLFFDLGKADLKPQAQWRLRQIGRILQENSFVVNVIGHTDD 185
Query: 92 LGSR----NSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKN 146
+ + ++ L RA V + + R V+ + P + + N
Sbjct: 186 MPNHSEQYPTNWELSTARACRVARFLIKEAQLPEERFFVSGHAWLQPLRPNNTAHNRSLN 245
Query: 147 RRAIVFLKGCR 157
RR + L R
Sbjct: 246 RRVEIVLMKER 256
>gi|215486075|ref|YP_002328506.1| outer membrane protein A [Escherichia coli O127:H6 str. E2348/69]
gi|215264147|emb|CAS08491.1| outer membrane protein A (3a; II*; G; d) [Escherichia coli O127:H6
str. E2348/69]
Length = 346
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F + +++P L L S L + D ++ G+ D +GS + AL
Sbjct: 216 TLKSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQALSE 275
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RRA +V +Y +++GI A ++ G+ P + A +RR + +K
Sbjct: 276 RRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVK 335
Query: 155 GCR 157
G +
Sbjct: 336 GIK 338
>gi|300921002|ref|ZP_07137390.1| outer membrane protein A [Escherichia coli MS 115-1]
gi|300412048|gb|EFJ95358.1| outer membrane protein A [Escherichia coli MS 115-1]
Length = 358
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 60/158 (37%), Gaps = 12/158 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + +S + + ++ V F+ + +++P L
Sbjct: 193 GLLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLKSDVLFNFNKATLKPEGQAALDQ 252
Query: 72 LGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L S L + D ++ G+ D +GS + L RRA +V +Y +++GI A ++
Sbjct: 253 LYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRAQSVVDYLISKGIPADKISARGM 312
Query: 129 GKEMPS--VYGHDEDAYAK-------NRRAIVFLKGCR 157
G+ P + A +RR + +KG +
Sbjct: 313 GESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKGIK 350
>gi|294792911|ref|ZP_06758057.1| outer membrane protein OprF [Veillonella sp. 6_1_27]
gi|294455856|gb|EFG24220.1| outer membrane protein OprF [Veillonella sp. 6_1_27]
Length = 345
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 49/133 (36%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHD 80
+P + + + S++FD+ R L+ + + +
Sbjct: 211 APAPVYTPAPAPTVEAPAYKTPKLDYYVQSIYFDSDQDVARADQYPNLTAAVNAANQYSQ 270
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ G+AD + +IAL RR V Y V G+SA R+ + G P
Sbjct: 271 DQVKLMGNADTDANPQYNIALSERRVQHVAQYLVNHGVSADRLIGIANGDVKPVATNSTA 330
Query: 141 DAYAKNRRAIVFL 153
A+NRR V++
Sbjct: 331 AGKAENRRVDVYI 343
>gi|158536391|gb|ABW72720.1| outer membrane protein A [Escherichia coli]
gi|158536395|gb|ABW72722.1| outer membrane protein A [Escherichia coli]
gi|158536397|gb|ABW72723.1| outer membrane protein A [Escherichia coli]
Length = 358
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 60/158 (37%), Gaps = 12/158 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + +S + + ++ V F+ + +++P L
Sbjct: 193 GLLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLKSDVLFNFNKATLKPEGQAALDQ 252
Query: 72 LGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L S L + D ++ G+ D +GS + L RRA +V +Y +++GI A ++
Sbjct: 253 LYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRAQSVVDYLISKGIPADKISARGM 312
Query: 129 GKEMPS--VYGHDEDAYAK-------NRRAIVFLKGCR 157
G+ P + A +RR + +KG +
Sbjct: 313 GESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKGIK 350
>gi|126664268|ref|ZP_01735260.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Flavobacteria bacterium BAL38]
gi|126623800|gb|EAZ94496.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Flavobacteria bacterium BAL38]
Length = 635
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 44/110 (40%), Gaps = 6/110 (5%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
++FD + IR + L + S + + I H D + + L RRA A
Sbjct: 524 IIYFDLDKWDIRQDAAEDLEKIISVMNQYPEMTIDIRSHTDSRQTHAYNELLSDRRAKAT 583
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHD-----EDAYAKNRRAIVFLK 154
+ V GI+ +R+ YG+ D E+ + KNRR+ +
Sbjct: 584 LEFMVKSGINRNRLTAKGYGETQLVNECSDGVLCSEEDHQKNRRSEFIVM 633
>gi|114046457|ref|YP_737007.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-7]
gi|113887899|gb|ABI41950.1| OmpA/MotB domain protein [Shewanella sp. MR-7]
Length = 485
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 47/122 (38%), Gaps = 2/122 (1%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRN 96
+ Q + + + FD S + P VL L S+ + F + GH D+ G R+
Sbjct: 363 TDAISQTGKATLEGLLFDYDSERLLPESKPVLEVLASYLKQNPTLSFYVVGHTDDKGERS 422
Query: 97 SSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+ +L RRA V S ++ G+ P ++ NRR + L+
Sbjct: 423 YNQSLSERRAATVIKQLSDGFKIPSAQLTAHGNGEYSPVASNTNDAGQKLNRRVELVLRS 482
Query: 156 CR 157
+
Sbjct: 483 DK 484
>gi|330445280|ref|ZP_08308932.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328489471|dbj|GAA03429.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 292
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 51/128 (39%), Gaps = 5/128 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGH--A 89
D V+ +L +Q + + F S ++P ++ + ++ + GH
Sbjct: 148 DKVIEIENLGQQVVIRIREKGAFPEGSAFLQPKFKPLVRQIALLVKDVPGIIRVSGHTAN 207
Query: 90 DELGS--RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
D++ S S+ L +RA +V +G ++M+V P ++ AKN
Sbjct: 208 DQMDSELYRSNWDLSAQRAVSVAQEMEKVKGFDHTKMRVVGLADTAPIADNKTKEGRAKN 267
Query: 147 RRAIVFLK 154
RR + +
Sbjct: 268 RRVEISIM 275
>gi|170769190|ref|ZP_02903643.1| outer membrane protein A [Escherichia albertii TW07627]
gi|170121842|gb|EDS90773.1| outer membrane protein A [Escherichia albertii TW07627]
Length = 358
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/158 (17%), Positives = 60/158 (37%), Gaps = 12/158 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + +S + + ++ V F+ + +++P L
Sbjct: 193 GLLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLKSDVLFNFNKATLKPEGQAALDQ 252
Query: 72 LGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L S L + D ++ G+ D +GS + L RRA +V +Y +++GI + ++
Sbjct: 253 LYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRAQSVVDYLISKGIPSDKISARGM 312
Query: 129 GKEMPS--VYGHDEDAYAK-------NRRAIVFLKGCR 157
G+ P + A +RR + +KG +
Sbjct: 313 GESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKGIK 350
>gi|126663670|ref|ZP_01734666.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Flavobacteria bacterium BAL38]
gi|126624253|gb|EAZ94945.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Flavobacteria bacterium BAL38]
Length = 625
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 53/112 (47%), Gaps = 3/112 (2%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGL 103
+ + ++F+ + +I L L + + ++ + + H D GS + ++ L
Sbjct: 511 AEVILQPIYFEFNKSNITAEGAAELDKLVAVMNEYPEMVIFAKSHTDSRGSDSYNMKLSD 570
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH--DEDAYAKNRRAIVFL 153
RRA + Y +++GI+ R+ +G+ P V E+ +A+NRR+ +
Sbjct: 571 RRAKSTVQYLISKGIAKERISGQGFGESEPKVACKSCTEEEHAQNRRSEFLI 622
>gi|146299407|ref|YP_001193998.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
UW101]
gi|146153825|gb|ABQ04679.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
Length = 666
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 48/136 (35%), Gaps = 7/136 (5%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCD 82
P V + + FFD +I+ + + L + +
Sbjct: 529 KTNNSIKPVKVTIAVGTDLGKLLKIPMN-FFDLGKATIKKSSVPQLQKMVDMLNQYPTIK 587
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH---- 138
I H D S S+ L +RA + ++ V++GI+A R+ +G+
Sbjct: 588 VDIRSHTDSRSSSESNQILSDKRAQSTKDWLVSKGINADRLTAKGFGETQLVNKCADGVK 647
Query: 139 -DEDAYAKNRRAIVFL 153
E + +NRR+ +
Sbjct: 648 CTEQQHQQNRRSEFII 663
>gi|85375533|ref|YP_459595.1| outer membrane protein [Erythrobacter litoralis HTCC2594]
gi|84788616|gb|ABC64798.1| outer membrane protein [Erythrobacter litoralis HTCC2594]
Length = 231
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 53/132 (40%), Gaps = 3/132 (2%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-F 83
D + + + E Q+ + D V F + S I A L+ + L+++
Sbjct: 86 DEQTAGSGVDVEEVGDQDAILVRLPDGVTFASGSARINSAFYPTLNEIAESLKRYPNSLI 145
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM--PSVYGHDED 141
+ G D GS + L RA V +Y VARG++ SR+ YG+ + D
Sbjct: 146 DVYGFTDTTGSDALNQQLSESRAQTVADYLVARGVARSRIATQGYGERREYLRIQTADNV 205
Query: 142 AYAKNRRAIVFL 153
NRR + +
Sbjct: 206 NEPLNRRVEIKI 217
>gi|157159269|ref|YP_001462189.1| outer membrane protein A [Escherichia coli E24377A]
gi|331667340|ref|ZP_08368205.1| outer membrane protein A [Escherichia coli TA271]
gi|51235576|gb|AAT98589.1| outer membrane protein A [Escherichia coli]
gi|157081299|gb|ABV21007.1| outer membrane protein A [Escherichia coli E24377A]
gi|331065696|gb|EGI37589.1| outer membrane protein A [Escherichia coli TA271]
Length = 350
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 60/158 (37%), Gaps = 12/158 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + +S + + ++ V F+ + +++P L
Sbjct: 185 GLLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLKSDVLFNFNKATLKPEGQAALDQ 244
Query: 72 LGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L S L + D ++ G+ D +GS + L RRA +V +Y +++GI A ++
Sbjct: 245 LYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRAQSVVDYLISKGIPADKISARGM 304
Query: 129 GKEMPS--VYGHDEDAYAK-------NRRAIVFLKGCR 157
G+ P + A +RR + +KG +
Sbjct: 305 GESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKGIK 342
>gi|212634139|ref|YP_002310664.1| OmpA protein [Shewanella piezotolerans WP3]
gi|212555623|gb|ACJ28077.1| OmpA [Shewanella piezotolerans WP3]
Length = 187
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 40/106 (37%), Gaps = 1/106 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
+ V F+ + I + VL + +WL + L+ G+ D +G + L L RA +
Sbjct: 80 SNIVKFEFAKSEILSSQRAVLERISAWLTQVPARLLLVGYTDSIGGEAFNHRLSLLRAKS 139
Query: 109 VFNYFV-ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V + R + G + P A NRR ++
Sbjct: 140 VKQALITEFNFEPERFDIKGVGSQAPIANNRTGSGRALNRRVEFYV 185
>gi|315179972|gb|ADT86886.1| hypothetical outer membrane protein [Vibrio furnissii NCTC 11218]
Length = 176
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 58/141 (41%), Gaps = 4/141 (2%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDS---VFFDTSSYSIRPADIQVLSNLGSWLE 77
++ D +P ++ + + + F SY I P + + +L+
Sbjct: 21 VNARDICPGTPSGAEIDNDGCGEVIRNSARRQLHILFANDSYEINPVFADQIQAMAEFLK 80
Query: 78 KHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ I+G+ ++G+ + L +RA AV ++ GIS R+++ +G+
Sbjct: 81 TYQSASIEIQGYTSKVGTNEYNQELSQKRAEAVERKLLSYGISPKRVRIIGFGETRLLDD 140
Query: 137 GHDEDAYAKNRRAIVFLKGCR 157
G A+A NRR + G +
Sbjct: 141 GDTNSAHAVNRRVTATVVGLK 161
>gi|293414237|ref|ZP_06656886.1| OOP family OmpA-OmpF porin [Escherichia coli B185]
gi|291434295|gb|EFF07268.1| OOP family OmpA-OmpF porin [Escherichia coli B185]
Length = 350
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 60/158 (37%), Gaps = 12/158 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + +S + + ++ V F+ + +++P L
Sbjct: 185 GLLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLKSDVLFNFNKATLKPEGQAALDQ 244
Query: 72 LGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L S L + D ++ G+ D +GS + L RRA +V +Y +++GI A ++
Sbjct: 245 LYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRAQSVVDYLISKGIPADKISARGM 304
Query: 129 GKEMPS--VYGHDEDAYAK-------NRRAIVFLKGCR 157
G+ P + A +RR + +KG +
Sbjct: 305 GESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKGIK 342
>gi|218688793|ref|YP_002397005.1| outer membrane protein A [Escherichia coli ED1a]
gi|218426357|emb|CAR07182.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli ED1a]
Length = 346
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F + +++P L L S L + D ++ G+ D +GS + AL
Sbjct: 216 TLKSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQALSE 275
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RRA +V +Y +++GI A ++ G+ P + A +RR + +K
Sbjct: 276 RRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVK 335
Query: 155 GCR 157
G +
Sbjct: 336 GIK 338
>gi|325928224|ref|ZP_08189430.1| flagellar motor protein [Xanthomonas perforans 91-118]
gi|325541413|gb|EGD12949.1| flagellar motor protein [Xanthomonas perforans 91-118]
Length = 324
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 44/121 (36%), Gaps = 4/121 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ + F T S ++ LS L S L +EG+ D S+
Sbjct: 158 IEVEINSDILFGTGSATLAGRARGTLSTLASVLRDAPNGVRVEGYTDNQPIATAQFPSNW 217
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
L RA +V + F GI+ R+ + YG+ E NRR ++ + A
Sbjct: 218 ELSAARAASVVHLFADDGIAPQRLAMVGYGEFRARADNSTEAGRNANRRVVLIILADSAG 277
Query: 160 T 160
+
Sbjct: 278 S 278
>gi|294624200|ref|ZP_06702921.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|294665070|ref|ZP_06730375.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|292601500|gb|EFF45516.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292605151|gb|EFF48497.1| flagellar motor protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
Length = 324
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 45/121 (37%), Gaps = 4/121 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ + F T S ++ LS L S L + +EG+ D S+
Sbjct: 158 IEVEINSDILFGTGSATLAGRARGTLSTLASVLREAPNGVRVEGYTDNQPIATAQFPSNW 217
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
L RA +V + F GI+ R+ + YG+ E NRR ++ + A
Sbjct: 218 ELSAARAASVVHLFADDGIAPQRLAMVGYGEFRARADNSTEAGRNANRRVVLIILADSAG 277
Query: 160 T 160
+
Sbjct: 278 S 278
>gi|82776247|ref|YP_402596.1| outer membrane protein A [Shigella dysenteriae Sd197]
gi|81240395|gb|ABB61105.1| outer membrane protein 3a [Shigella dysenteriae Sd197]
Length = 350
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 60/158 (37%), Gaps = 12/158 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + +S + + ++ V F+ + +++P L
Sbjct: 185 GLLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLKSDVLFNFNKATLKPEGQAALDQ 244
Query: 72 LGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L S L + D ++ G+ D +GS + L RRA +V +Y +++GI A ++
Sbjct: 245 LYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRAQSVVDYLISKGIPADKISARGM 304
Query: 129 GKEMPS--VYGHDEDAYAK-------NRRAIVFLKGCR 157
G+ P + A +RR + +KG +
Sbjct: 305 GESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKGIK 342
>gi|255036344|ref|YP_003086965.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
18053]
gi|254949100|gb|ACT93800.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
Length = 502
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 46/116 (39%), Gaps = 2/116 (1%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSS 98
L + ++ ++ FDT IR A + LS + L ++ GH D S +
Sbjct: 371 LPKDECEALFSNIEFDTDKAIIRNASKETLSKVVELLNMRTNCRIVLVGHTDARASDAYN 430
Query: 99 IALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++L RR A + V G SR+ YG+ P + NRR + +
Sbjct: 431 VSLSRRRVDAAKRFLVRAGLTDPSRIIAEYYGEYRPIAENTTVEGLQSNRRVEIKI 486
>gi|229098968|ref|ZP_04229903.1| OmpA/MotB domain protein [Bacillus cereus Rock3-29]
gi|229117997|ref|ZP_04247357.1| OmpA/MotB domain protein [Bacillus cereus Rock1-3]
gi|228665446|gb|EEL20928.1| OmpA/MotB domain protein [Bacillus cereus Rock1-3]
gi|228684466|gb|EEL38409.1| OmpA/MotB domain protein [Bacillus cereus Rock3-29]
Length = 233
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 18/120 (15%), Positives = 43/120 (35%), Gaps = 6/120 (5%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSS 98
++ ++ ++V FD+ ++ + + + + + + + GH D + N+
Sbjct: 106 TEKGLMVTILENVLFDSGKADVKLESLGIAKEMSNLLVSASPREITVSGHTDTVPIANAQ 165
Query: 99 IALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
A R + + + + YG+ + AKNRR VF+
Sbjct: 166 FASNWELSTQRAVNFMQVLLQNKDLQPGKFSAIGYGEYRSIAQNDTPEGKAKNRRVEVFI 225
>gi|242310688|ref|ZP_04809843.1| lipoprotein [Helicobacter pullorum MIT 98-5489]
gi|239523086|gb|EEQ62952.1| lipoprotein [Helicobacter pullorum MIT 98-5489]
Length = 172
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 17/169 (10%)
Query: 1 MQYSTIFIILSAITMMSIS----GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---- 52
M+ S + L+A +M G+D ++ + + ++ D +
Sbjct: 1 MKKSLVLGSLAAALLMVGCSQKSGVDTSASQTQNMQNAQQGYVAGKDNFVNIEDRIQYVE 60
Query: 53 ------FFDTSSYSIRPADIQVLSNLGSWLEK---HDCDFLIEGHADELGSRNSSIALGL 103
FF+ +SIRP + N + L+ + IEG+ DE G+ + ALGL
Sbjct: 61 NGLQNIFFNFDQFSIRPDMQNAVDNDANVLKDTAANPLTVRIEGNTDEWGTDEYNYALGL 120
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+RA AV + VARG+S +M + SYG+ P+ + +A+NR+
Sbjct: 121 KRAVAVKDALVARGVSEGKMVLVSYGESKPTCMEKTRECWAENRKVTFK 169
>gi|77462452|ref|YP_351956.1| OmpA/MotB family outer membrane protein [Rhodobacter sphaeroides
2.4.1]
gi|221638315|ref|YP_002524577.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides KD131]
gi|332560336|ref|ZP_08414658.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides WS8N]
gi|77386870|gb|ABA78055.1| outer membrane protein, OmpA/MotB family [Rhodobacter sphaeroides
2.4.1]
gi|221159096|gb|ACM00076.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides KD131]
gi|332278048|gb|EGJ23363.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides WS8N]
Length = 213
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 4/138 (2%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
G ++ + V +L ++F+S V ++ F S ++ P L W+ +
Sbjct: 35 GNATMNNSLLQMGAVSATQALGQRFASEVDPTITFPFDSAALTPEAQATLRRQADWIRQF 94
Query: 80 D-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV-TSYGKEMPSVYG 137
F + GH D +GS + LGLRRA AV Y ++GIS +R++ SYG+ P +
Sbjct: 95 PEVRFRVYGHTDLVGSEAYNKRLGLRRAKAVVAYLASQGISPARLEALVSYGETRPVIPV 154
Query: 138 HDEDAYAKNRRAIVFLKG 155
+ NRR + + G
Sbjct: 155 AAPEER--NRRTVTEVSG 170
>gi|126461330|ref|YP_001042444.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
17029]
gi|126102994|gb|ABN75672.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17029]
Length = 213
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 4/138 (2%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
G ++ + V +L ++F+S V ++ F S ++ P L W+ +
Sbjct: 35 GNATMNNSLLQMGAVSATQALGQRFASEVDPTITFPFDSAALTPEAQATLRRQADWIRQF 94
Query: 80 D-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV-TSYGKEMPSVYG 137
F + GH D +GS + LGLRRA AV Y ++GIS +R++ SYG+ P +
Sbjct: 95 PEVRFRVYGHTDLVGSEAYNKRLGLRRAKAVVAYLASQGISPARLEALVSYGETRPVIPV 154
Query: 138 HDEDAYAKNRRAIVFLKG 155
+ NRR + + G
Sbjct: 155 AAPEER--NRRTVTEVSG 170
>gi|323497295|ref|ZP_08102314.1| OmpA family protein [Vibrio sinaloensis DSM 21326]
gi|323317652|gb|EGA70644.1| OmpA family protein [Vibrio sinaloensis DSM 21326]
Length = 205
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 1/109 (0%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALG 102
+ D++ F+T S + P L +G +L D +I+GHAD G+ + + +L
Sbjct: 90 IMVKLKDTIKFNTGSSQVMPDSAYWLDMMGEYLSTQPGIDIVIDGHADSTGAPSFNDSLS 149
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
++RA AV V ++ + YG+ +P+ A NRR V
Sbjct: 150 MKRAKAVKQQLVRNNVAMDSIFTRGYGEFVPACSNASMAGKACNRRVEV 198
>gi|312883339|ref|ZP_07743065.1| OmpA family protein [Vibrio caribbenthicus ATCC BAA-2122]
gi|309368955|gb|EFP96481.1| OmpA family protein [Vibrio caribbenthicus ATCC BAA-2122]
Length = 206
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 1/111 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIA 100
+ + D++ F T S S+ L +GS+L D +I+GH+D G+ + +
Sbjct: 89 DHMMVKLKDTIKFHTGSASVSSNSRYWLDIMGSYLATQPGIDIVIDGHSDNTGAPSFNDK 148
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
L ++RA V V +S + YG+ +P+ A NRR V
Sbjct: 149 LSIQRASEVKKQLVRNQVSMGSIYTRGYGEYVPACSNKTSVGKACNRRVEV 199
>gi|309786688|ref|ZP_07681308.1| outer membrane protein A [Shigella dysenteriae 1617]
gi|129143|sp|P02935|OMPA_SHIDY RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II; Flags: Precursor
gi|46945|emb|CAA24638.1| unnamed protein product [Shigella dysenteriae]
gi|308925381|gb|EFP70868.1| outer membrane protein A [Shigella dysenteriae 1617]
Length = 351
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 60/158 (37%), Gaps = 12/158 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + +S + + ++ V F+ + +++P L
Sbjct: 186 GLLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLKSDVLFNFNKATLKPEGQAALDQ 245
Query: 72 LGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L S L + D ++ G+ D +GS + L RRA +V +Y +++GI A ++
Sbjct: 246 LYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRAQSVVDYLISKGIPADKISARGM 305
Query: 129 GKEMPS--VYGHDEDAYAK-------NRRAIVFLKGCR 157
G+ P + A +RR + +KG +
Sbjct: 306 GESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKGIK 343
>gi|325916150|ref|ZP_08178436.1| flagellar motor protein [Xanthomonas vesicatoria ATCC 35937]
gi|325537641|gb|EGD09351.1| flagellar motor protein [Xanthomonas vesicatoria ATCC 35937]
Length = 324
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 44/121 (36%), Gaps = 4/121 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ + F T S ++ LS L S L +EG+ D S+
Sbjct: 158 IEVEINSDILFGTGSATLAGGARGTLSTLASVLRDAPNGVRVEGYTDNQPIATVQFPSNW 217
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
L RA +V + F GI+ R+ + YG+ E NRR ++ + A
Sbjct: 218 ELSAARAASVVHLFADDGIAPQRLAMVGYGEFRARADNTTEAGRNANRRVVLIILADSAG 277
Query: 160 T 160
+
Sbjct: 278 S 278
>gi|323967204|gb|EGB62628.1| OmpA transmembrane domain-containing protein [Escherichia coli
M863]
gi|323976664|gb|EGB71752.1| OmpA transmembrane domain-containing protein [Escherichia coli
TW10509]
gi|327253749|gb|EGE65378.1| outer membrane protein A [Escherichia coli STEC_7v]
Length = 350
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 60/158 (37%), Gaps = 12/158 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + +S + + ++ V F+ + +++P L
Sbjct: 185 GLLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLKSDVLFNFNKATLKPEGQAALDQ 244
Query: 72 LGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L S L + D ++ G+ D +GS + L RRA +V +Y +++GI A ++
Sbjct: 245 LYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRAQSVVDYLISKGIPADKISARGM 304
Query: 129 GKEMPS--VYGHDEDAYAK-------NRRAIVFLKGCR 157
G+ P + A +RR + +KG +
Sbjct: 305 GESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKGIK 342
>gi|227884084|ref|ZP_04001889.1| OOP family OmpA-OmpF porin [Escherichia coli 83972]
gi|300978356|ref|ZP_07174229.1| outer membrane protein A [Escherichia coli MS 45-1]
gi|301047785|ref|ZP_07194839.1| outer membrane protein A [Escherichia coli MS 185-1]
gi|227838836|gb|EEJ49302.1| OOP family OmpA-OmpF porin [Escherichia coli 83972]
gi|300300348|gb|EFJ56733.1| outer membrane protein A [Escherichia coli MS 185-1]
gi|300409701|gb|EFJ93239.1| outer membrane protein A [Escherichia coli MS 45-1]
gi|315291176|gb|EFU50536.1| outer membrane protein A [Escherichia coli MS 153-1]
Length = 358
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F + +++P L L S L + D ++ G+ D +GS + AL
Sbjct: 228 TLKSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQALSE 287
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RRA +V +Y +++GI A ++ G+ P + A +RR + +K
Sbjct: 288 RRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVK 347
Query: 155 GCR 157
G +
Sbjct: 348 GIK 350
>gi|320196555|gb|EFW71178.1| Outer membrane protein A precursor [Escherichia coli WV_060327]
gi|330910729|gb|EGH39239.1| outer membrane protein A precursor [Escherichia coli AA86]
Length = 358
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/158 (18%), Positives = 60/158 (37%), Gaps = 12/158 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + +S + + ++ V F + +++P L
Sbjct: 193 GMLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLKSDVLFTFNKATLKPEGQAALDQ 252
Query: 72 LGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L S L + D ++ G+ D +GS + AL RRA +V +Y +++GI A ++
Sbjct: 253 LYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQALSERRAQSVVDYLISKGIPADKISARGM 312
Query: 129 GKEMPS--VYGHDEDAYAK-------NRRAIVFLKGCR 157
G+ P + A +RR + +KG +
Sbjct: 313 GESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKGIK 350
>gi|269119253|ref|YP_003307430.1| OmpA/MotB domain protein [Sebaldella termitidis ATCC 33386]
gi|268613131|gb|ACZ07499.1| OmpA/MotB domain protein [Sebaldella termitidis ATCC 33386]
Length = 366
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 51/144 (35%), Gaps = 17/144 (11%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSNLGSWLEKHDCD 82
+ ++ ++ +V +FD +++ Q + ++ + +
Sbjct: 199 PAARPVEPIVVTPEKPAPIGKTMDLTVSGAYFDFDKATVKENAKQEIRGAAQQIKNLNQN 258
Query: 83 ------FLIEGHADELGSRNSSIALGLRRAYAVFNYFVA--RGISASRMKVTSYGKEMPS 134
I GH D G++ + L RRA AV + + + R V YG++ P
Sbjct: 259 NNLTGVLDIAGHTDSKGAKEYNQKLSERRAAAVADVYTQVIGTGNGIRYNVAGYGEDRPV 318
Query: 135 VYG------HDEDAYAKNRRAIVF 152
+ + A+NRR V
Sbjct: 319 APNTLPNGKDNPEGRARNRRVEVK 342
>gi|170681860|ref|YP_001744213.1| outer membrane protein A [Escherichia coli SMS-3-5]
gi|170519578|gb|ACB17756.1| outer membrane protein A [Escherichia coli SMS-3-5]
Length = 358
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/158 (18%), Positives = 61/158 (38%), Gaps = 12/158 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + +S + + ++ V F+ + +++P L
Sbjct: 193 GMLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLKSDVLFNFNKATLKPEGQAALDQ 252
Query: 72 LGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L S L + D ++ G+ D +GS + AL RRA +V +Y +++GI A ++
Sbjct: 253 LYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQALSERRAQSVVDYLISKGIPADKISARGM 312
Query: 129 GKEMPS--VYGHDEDAYAK-------NRRAIVFLKGCR 157
G+ P + A +RR + +KG +
Sbjct: 313 GESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKGIK 350
>gi|50119379|ref|YP_048546.1| putative porin [Pectobacterium atrosepticum SCRI1043]
gi|49609905|emb|CAG73343.1| putative porin [Pectobacterium atrosepticum SCRI1043]
Length = 506
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 53/141 (37%), Gaps = 2/141 (1%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+ I+ +N+ S + + + V DS FDT+S + ++ + +
Sbjct: 83 ALAKIAQEENIAITTRSLQSQEKSGTETVGLVAQVQDSGMFDTNSAQLSTDGLRQVKKIA 142
Query: 74 SWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
+ +++ D L+ GH D GS + L +RA V G+SA ++ G
Sbjct: 143 TAMKEGDQSGVILVVGHTDATGSAEWNQRLSEQRAQNVGRVLEQAGLSAQKLYFQGAGSA 202
Query: 132 MPSVYGHDEDAYAKNRRAIVF 152
P NRR +
Sbjct: 203 RPVADNVTITGRTSNRRVEIV 223
>gi|129134|sp|P24016|OMPA_CITFR RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II
gi|144442|gb|AAA23095.1| outer membrane protein II [Citrobacter freundii]
Length = 238
Score = 69.4 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 54/121 (44%), Gaps = 12/121 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L + S L + D ++ G D +GS + L
Sbjct: 117 TLKSDVLFNFNKATLKPEGQQALDQMYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSE 176
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
+RA +V +Y +++GI + ++ G+ P + A A +RR + +K
Sbjct: 177 KRAQSVVDYLISKGIPSDKISARGMGESNPVTGNTCDNVKARAALIDCLAPDRRVEIEVK 236
Query: 155 G 155
G
Sbjct: 237 G 237
>gi|330443988|ref|YP_004376974.1| peptidoglycan-associated lipoprotein [Chlamydophila pecorum E58]
gi|328807098|gb|AEB41271.1| peptidoglycan-associated lipoprotein [Chlamydophila pecorum E58]
Length = 189
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 47/124 (37%), Positives = 68/124 (54%), Gaps = 2/124 (1%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADI-QVLSNLGSWLEK-HDCDFLIEGHA 89
E + S+ ++ F+T SYSI+ + +L+ L ++K IEGH
Sbjct: 63 AVDSQEEQNYKSASTPTFRNITFETDSYSIKGEENLSILTTLVHHMKKSPKVTLYIEGHT 122
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
DE G+ + ++ALG RRA AV NY + +GISA R+ SYGKE P GHDE A+ +NRR
Sbjct: 123 DERGAASYNLALGSRRANAVKNYLIKQGISAERLFTISYGKEHPRNPGHDELAWQQNRRT 182
Query: 150 IVFL 153
+
Sbjct: 183 EFKI 186
>gi|262195655|ref|YP_003266864.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
gi|262079002|gb|ACY14971.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
Length = 507
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 44/107 (41%), Gaps = 2/107 (1%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH--DCDFLIEGHADELGSRNSSIALGLRR 105
+ +V F ++ L + L++H IEGHA + G ++ L R
Sbjct: 372 LLSNVLFGYDKCALSEQSHDSLREVAMTLQQHPEWGQIRIEGHASQEGKPEYNLRLSSCR 431
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
A AV + +A G++A R++ +G P + +NRR
Sbjct: 432 AMAVRKFLIANGVAAERLQSLGFGDTCPKFSTGTPEEMQQNRRVEFI 478
>gi|224584423|ref|YP_002638221.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|224468950|gb|ACN46780.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 358
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L L S L + D ++ G D +GS + L
Sbjct: 228 TLKSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSE 287
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE---------DAYAKNRRAIVFLK 154
+RA +V +Y +++GI ++++ G+ P + D A +RR + +K
Sbjct: 288 KRAQSVVDYLISKGIPSNKISARGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEVK 347
Query: 155 GCR 157
G +
Sbjct: 348 GVK 350
>gi|222102518|ref|YP_002539557.1| OmpA family protein [Agrobacterium vitis S4]
gi|221739119|gb|ACM39852.1| OmpA family protein [Agrobacterium vitis S4]
Length = 332
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 54/131 (41%), Gaps = 5/131 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSS---VGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCD 82
+ + + + ++ + + + + F+T S +++ + L+ + + +
Sbjct: 200 AMETGEVTADAQAMSDSLAKTGHIALYGIQFETDSAALKAESDKTLAQMAEFLTQDVSRK 259
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDED 141
I GH D G+ ++ L RA AV A+ I + R++ G P+ ++
Sbjct: 260 VYIVGHTDSSGALERNMNLSQARAAAVVKALTAKFGIDSDRLQPKGIGPYAPAASNANDA 319
Query: 142 AYAKNRRAIVF 152
AKNRR +
Sbjct: 320 GRAKNRRVEMV 330
>gi|114778984|ref|ZP_01453771.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Mariprofundus ferrooxydans PV-1]
gi|114550783|gb|EAU53353.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Mariprofundus ferrooxydans PV-1]
Length = 466
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 41/104 (39%), Gaps = 2/104 (1%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVF 110
+ F + S I +L ++ +EGH D +G+ + L RRA V
Sbjct: 346 IHFPSGSAIIPSESYDLLELASKAIDLFGDRAVRVEGHTDSMGNDEYNQNLSERRATTVK 405
Query: 111 NYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
Y AR + R + +G+ P + +KNRR + L
Sbjct: 406 EYLDARFSNNKRTITSIGFGENKPIANNEKAEGRSKNRRIDIVL 449
>gi|62179592|ref|YP_216009.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|62127225|gb|AAX64928.1| putative hydrogenase, membrane component [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|322714061|gb|EFZ05632.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
Length = 350
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L L S L + D ++ G D +GS + L
Sbjct: 220 TLKSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSE 279
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE---------DAYAKNRRAIVFLK 154
+RA +V +Y +++GI ++++ G+ P + D A +RR + +K
Sbjct: 280 KRAQSVVDYLISKGIPSNKISARGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEVK 339
Query: 155 GCR 157
G +
Sbjct: 340 GVK 342
>gi|171915499|ref|ZP_02930969.1| OmpA/MotB domain protein [Verrucomicrobium spinosum DSM 4136]
Length = 355
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 5/114 (4%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRNSSIALGLR 104
+ + F+ S + L LG + + F+IEGH D +GS ++ L R
Sbjct: 238 IMLPTDLLFEYGSDQLAENARLSLMKLGYLITKNPNSRFIIEGHTDTIGSAEFNLDLSQR 297
Query: 105 RAYAVFNYF-VARGISASRMKVTSYGKEMPSV---YGHDEDAYAKNRRAIVFLK 154
RA AV + + +S R+ G+ P ++ A NRR + ++
Sbjct: 298 RANAVVGWLIRSLRLSNDRIDAVGMGESRPLARVNPNGTKEEQALNRRVEIKVR 351
>gi|153832936|ref|ZP_01985603.1| putative protein F-related protein [Vibrio harveyi HY01]
gi|148870859|gb|EDL69758.1| putative protein F-related protein [Vibrio harveyi HY01]
Length = 209
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 1/119 (0%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSR 95
E+ E + + V F T S + + +LG +L + D D +I+GHAD G+
Sbjct: 86 ETISGEHLMIRLKEQVHFQTGSARLSAQSQDWIQSLGHYLAGRTDVDVVIDGHADSTGAA 145
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ + +L +RA V +A + R+ +G+ +P A NRR + L
Sbjct: 146 SFNDSLSEKRAREVEKQLLATSLPRQRVFSRGFGEYVPQCSNATASGKACNRRVELMLM 204
>gi|110641146|ref|YP_668876.1| outer membrane protein A [Escherichia coli 536]
gi|331657022|ref|ZP_08357984.1| outer membrane protein A [Escherichia coli TA206]
gi|110342738|gb|ABG68975.1| outer membrane protein A [Escherichia coli 536]
gi|222032681|emb|CAP75420.1| Outer membrane protein A [Escherichia coli LF82]
gi|331055270|gb|EGI27279.1| outer membrane protein A [Escherichia coli TA206]
Length = 346
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F + +++P L L S L + D ++ G+ D +GS + AL
Sbjct: 216 TLKSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQALSE 275
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RRA +V +Y +++GI A ++ G+ P + A +RR + +K
Sbjct: 276 RRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVK 335
Query: 155 GCR 157
G +
Sbjct: 336 GIK 338
>gi|311992350|gb|ADQ26748.1| flagellar stator protein [Aeromonas hydrophila]
Length = 291
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 46/129 (35%), Gaps = 5/129 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
L L Q +G+ F S ++P I +++ + L ++ GH D +
Sbjct: 153 LEVEQLGSQLVIRIGEKALFPADSAFLQPQFIPLVNKISGILADIPGKVVVTGHTDNSQA 212
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
S+ L + R+ ++ + + A+R+ P + NRR
Sbjct: 213 PVELYRSNWELSVLRSASIVHTLLTNPKLDATRVIAQGVADAQPRYPNDTAEHRQANRRV 272
Query: 150 IVFLKGCRA 158
+ L +A
Sbjct: 273 EITLSQGKA 281
>gi|152969543|ref|YP_001334652.1| outer membrane protein A [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|238894012|ref|YP_002918746.1| outer membrane protein A [Klebsiella pneumoniae NTUH-K2044]
gi|7442975|pir||JC6558 outer membrane protein A precursor - Klebsiella pneumoniae
gi|150954392|gb|ABR76422.1| outer membrane protein 3a (II*;G;d) [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238546328|dbj|BAH62679.1| outer membrane protein A [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
Length = 356
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L L + ++ D ++ G+ D +GS + L
Sbjct: 226 TLKSDVLFNFNKATLKPEGQQALDQLYTQLSNMDPKDGSAVVLGYTDRIGSEAYNQQLSE 285
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
+RA +V +Y VA+GI A ++ G+ P + A A +RR + +K
Sbjct: 286 KRAQSVVDYLVAKGIPAGKISARGMGESNPVTGNTCDNVKARAALIDCLAPDRRVEIEVK 345
Query: 155 GCR 157
G +
Sbjct: 346 GYK 348
>gi|21242652|ref|NP_642234.1| flagellar motor protein MotD [Xanthomonas axonopodis pv. citri str.
306]
gi|21108121|gb|AAM36770.1| MotB protein [Xanthomonas axonopodis pv. citri str. 306]
Length = 324
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 45/121 (37%), Gaps = 4/121 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ + F T S ++ LS L + L + +EG+ D S+
Sbjct: 158 IEVEINSDILFGTGSATLAGRARGTLSTLAAVLREAPNGVRVEGYTDNQPIATAQFPSNW 217
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
L RA +V + F GI+ R+ + YG+ E NRR ++ + A
Sbjct: 218 ELSAARAASVVHLFADDGIAPQRLAMVGYGEFRARADNSTEAGRNANRRVVLIILADSAG 277
Query: 160 T 160
+
Sbjct: 278 S 278
>gi|288940835|ref|YP_003443075.1| OmpA/MotB domain-containing protein [Allochromatium vinosum DSM
180]
gi|288896207|gb|ADC62043.1| OmpA/MotB domain protein [Allochromatium vinosum DSM 180]
Length = 351
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 37/105 (35%), Gaps = 2/105 (1%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
+ FD +I+ L + +E D I GH D G+ ++ L RRA
Sbjct: 245 HGIQFDFDQATIKDESKPQLEQIALMLVENPDLKLYIVGHTDNRGTLEYNMDLSRRRAEE 304
Query: 109 VFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
V + GI R+K P E A NRR +
Sbjct: 305 VVRTLIQSYGILGERLKPMGVAGLAPLTSNATEAGRALNRRVEIV 349
>gi|283782254|ref|YP_003373009.1| OmpA/MotB domain-containing protein [Pirellula staleyi DSM 6068]
gi|283440707|gb|ADB19149.1| OmpA/MotB domain protein [Pirellula staleyi DSM 6068]
Length = 282
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 48/140 (34%), Gaps = 5/140 (3%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS--WL 76
+ ++ + ++ + F T S +++ + +
Sbjct: 136 ANSSATNSLSTVQIPGIDVRQDGSVIRIELPADKLFVTGSLQPTLEAQRIIDEVATAIIR 195
Query: 77 EKHDCDFLIEGHADELGSRNSSIA--LGLRRAYAVFNYFVARGISASR-MKVTSYGKEMP 133
+IEGH D + N + A L ++ AVF V R R + + + G+ P
Sbjct: 196 SYPRQRIVIEGHTDNAQAGNPAGAHLLAYNQSQAVFQQLVQRNSIPVRQLAIAAMGENHP 255
Query: 134 SVYGHDEDAYAKNRRAIVFL 153
E AKNRR + +
Sbjct: 256 LASNGTEQGRAKNRRIEIVV 275
>gi|167921374|ref|ZP_02508465.1| hypothetical protein BpseBC_22683 [Burkholderia pseudomallei
BCC215]
Length = 396
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 43/127 (33%), Gaps = 4/127 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
L+ + S + F + + PA ++ + + + K + G+ D
Sbjct: 268 AAGTLSVEENARRSSVTFRGDAMFAPGAAGVNPAMGPLIRKIAAEIAKVPGKVTVRGYTD 327
Query: 91 ELGSRNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
++ A L RA V + G+ ASR++ G P A N
Sbjct: 328 NQPIKSRQFASNEALSEERATQVMQMLQSAGVPASRLEALGKGGVEPIGDNRTPQGRALN 387
Query: 147 RRAIVFL 153
RR + +
Sbjct: 388 RRVEITV 394
>gi|238750197|ref|ZP_04611700.1| Type VI secretion system OmpA/MotB family protein [Yersinia rohdei
ATCC 43380]
gi|238711741|gb|EEQ03956.1| Type VI secretion system OmpA/MotB family protein [Yersinia rohdei
ATCC 43380]
Length = 457
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 42/123 (34%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
++ Q F S +RP I V+ + + + LI GH D +
Sbjct: 333 VSVDETTSQSKVIFKGDTMFQVGSDKVRPEIINVIDRVAQEVHRVQGAVLIVGHTDSMPI 392
Query: 95 RNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
L +RA V + GI +++ G P D A+NRR
Sbjct: 393 NKPGFPNNQVLSEKRAANVAHLMEKAGIPTDKIRFEGKGDIQPVGSNGDAAGRAQNRRVE 452
Query: 151 VFL 153
+F+
Sbjct: 453 IFV 455
>gi|254469405|ref|ZP_05082810.1| OmpA family protein [Pseudovibrio sp. JE062]
gi|211961240|gb|EEA96435.1| OmpA family protein [Pseudovibrio sp. JE062]
Length = 473
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 40/105 (38%), Gaps = 4/105 (3%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIA----LGLRRAYA 108
F T+ ++ I V++ + L + G++D + RN+ L RA
Sbjct: 359 MFATARDTLTARFIPVVNRVAEALNTRPGRINVVGYSDNIPIRNAQFRNNVALSKARAQT 418
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V + R +R++ G P + A+NRR + L
Sbjct: 419 VADLIKVRLTDKNRVRAIGRGSADPIASNATAEGRAQNRRIDITL 463
>gi|238055498|sp|B7LNW7|OMPA_ESCF3 RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II; Flags: Precursor
Length = 351
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 60/158 (37%), Gaps = 12/158 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + +S + + ++ V F+ + +++P L
Sbjct: 186 GLLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLKSDVLFNFNKATLKPEGQAALDQ 245
Query: 72 LGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L S L + D ++ G+ D +GS + L RRA +V +Y +++GI A ++
Sbjct: 246 LYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRAQSVVDYLISKGIPADKISARGM 305
Query: 129 GKEMPS--VYGHDEDAYAK-------NRRAIVFLKGCR 157
G+ P + A +RR + +KG +
Sbjct: 306 GESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKGIK 343
>gi|218960421|ref|YP_001740196.1| hypothetical protein; putative signal peptide [Candidatus
Cloacamonas acidaminovorans]
gi|167729078|emb|CAO79989.1| hypothetical protein; putative signal peptide [Candidatus
Cloacamonas acidaminovorans]
Length = 781
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 44/108 (40%), Gaps = 2/108 (1%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHAD-ELGSRNSSIALGLRR 105
V ++ FD S ++ +L+ + L I GH G + L R
Sbjct: 672 VFSNIQFDYDSAVLKAESYPILNEIALTLLNNPTIRVEISGHTCENQGGEKYNTTLSENR 731
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
A AV +Y +G++A+RM YG P E+ A NRR V +
Sbjct: 732 AAAVLSYLKGKGVNANRMISVGYGLSRPLNNNLSEEDKALNRRVEVKI 779
>gi|218557855|ref|YP_002390768.1| outer membrane protein A [Escherichia coli S88]
gi|7188818|gb|AAF37887.1|AF234269_1 outer membrane protein A [Escherichia coli RS218]
gi|218364624|emb|CAR02310.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli S88]
gi|294493105|gb|ADE91861.1| outer membrane protein A [Escherichia coli IHE3034]
gi|323953341|gb|EGB49207.1| OmpA transmembrane domain-containing protein [Escherichia coli
H252]
gi|323958256|gb|EGB53965.1| OmpA transmembrane domain-containing protein [Escherichia coli
H263]
Length = 346
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F + +++P L L S L + D ++ G+ D +GS + AL
Sbjct: 216 TLKSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQALSE 275
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RRA +V +Y +++GI A ++ G+ P + A +RR + +K
Sbjct: 276 RRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVK 335
Query: 155 GCR 157
G +
Sbjct: 336 GIK 338
>gi|86132229|ref|ZP_01050824.1| OmpA family protein [Dokdonia donghaensis MED134]
gi|85817148|gb|EAQ38331.1| OmpA family protein [Dokdonia donghaensis MED134]
Length = 674
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 54/130 (41%), Gaps = 5/130 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHA 89
DT + +E ++FD YSIR VL L + ++ I+ H
Sbjct: 544 TDTQSPQVVEKEGKLFIDVAPIYFDFDLYSIREDSQVVLDELAAKLIKYKRIKMKIQSHT 603
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH----DEDAYAK 145
D G ++ L RA A F+Y V +GI +R++ YG P V E+ +
Sbjct: 604 DSRGPEAYNVPLSQNRAKATFDYLVEKGIDPTRIQYQGYGNSQPVVECPAGQCTEEEHQL 663
Query: 146 NRRAIVFLKG 155
NRR+ + G
Sbjct: 664 NRRSEFEITG 673
>gi|146276360|ref|YP_001166519.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
17025]
gi|145554601|gb|ABP69214.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17025]
Length = 212
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 69/138 (50%), Gaps = 4/138 (2%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
G ++ + + +L ++F+S V ++ F S + P +VL +W+ +
Sbjct: 34 GNATMNNSLLQMGEIDATQALGQRFASEVEPTITFPFDSARLTPEAQRVLREQANWIRQF 93
Query: 80 D-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV-TSYGKEMPSVYG 137
F + GH D +GS + + +LGLRRA AV +F ++GIS SR++ SYG+ P +
Sbjct: 94 PEVRFRVYGHTDLVGSASYNKSLGLRRAKAVVAFFASQGISPSRLEALVSYGETRPVIPV 153
Query: 138 HDEDAYAKNRRAIVFLKG 155
+ NRR + + G
Sbjct: 154 ATPEER--NRRTVTEVSG 169
>gi|153950607|ref|YP_001399766.1| OmpA domain-containing protein [Yersinia pseudotuberculosis IP
31758]
gi|152962102|gb|ABS49563.1| OmpA domain protein [Yersinia pseudotuberculosis IP 31758]
Length = 573
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
Query: 53 FFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FD + ++P I++L + L + K ++ GH D G ++ L L+RA A+ +
Sbjct: 446 LFDVGKFQLKPGSIKMLVDALMNIRAKPGWLIVVAGHTDITGDAQANQILSLKRAEALRD 505
Query: 112 Y-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +S + V YG P + A NRR + L
Sbjct: 506 WMLSTSDVSPTCFAVQGYGATRPVATNESAEGRAANRRVEISL 548
>gi|126175214|ref|YP_001051363.1| OmpA/MotB domain-containing protein [Shewanella baltica OS155]
gi|153001540|ref|YP_001367221.1| OmpA/MotB domain-containing protein [Shewanella baltica OS185]
gi|160876276|ref|YP_001555592.1| OmpA/MotB domain-containing protein [Shewanella baltica OS195]
gi|217972531|ref|YP_002357282.1| OmpA/MotB domain-containing protein [Shewanella baltica OS223]
gi|125998419|gb|ABN62494.1| OmpA/MotB domain protein [Shewanella baltica OS155]
gi|151366158|gb|ABS09158.1| OmpA/MotB domain protein [Shewanella baltica OS185]
gi|160861798|gb|ABX50332.1| OmpA/MotB domain protein [Shewanella baltica OS195]
gi|217497666|gb|ACK45859.1| OmpA/MotB domain protein [Shewanella baltica OS223]
gi|315268465|gb|ADT95318.1| OmpA/MotB domain protein [Shewanella baltica OS678]
Length = 196
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 54/139 (38%), Gaps = 6/139 (4%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
+ + + D S+P+ + + V+F+ + + + + L+ + ++
Sbjct: 60 VEVEATASADCSTSNPNAEFSADCHNISTAV-----VYFEFAIAEVDFSQWKTLALVKAY 114
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPS 134
L +D + GH D +G+ + L L+RA V V G + +R V G P
Sbjct: 115 LAANDVALTLVGHTDIVGTPEFNYQLSLQRAQNVKRILVEDYGFNPNRFTVMGKGISEPV 174
Query: 135 VYGHDEDAYAKNRRAIVFL 153
+ + NRR +
Sbjct: 175 ADNRSSEGRSLNRRVQFIV 193
>gi|296108643|ref|YP_003620344.1| hypothetical protein lpa_04343 [Legionella pneumophila 2300/99
Alcoy]
gi|295650545|gb|ADG26392.1| Hypothetical protein lpa_04343 [Legionella pneumophila 2300/99
Alcoy]
Length = 294
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
Query: 46 SSVGDSVF-FDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALG 102
V +SVF F S + AD L + +++ + GHAD+ G + + A+
Sbjct: 181 EDVKESVFHFGVDSKLLSDADKAQLRRIAQYVDADVQIDVIKVIGHADDSGRKGYNNAIS 240
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA +V NY + G+ ++ +T G P ++ A NRR +V L
Sbjct: 241 QYRAESVKNYLIRLGVPQRKLSITWVGALQPIARNDTDEGRAANRRVVVTL 291
>gi|213646608|ref|ZP_03376661.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
Length = 358
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 61/158 (38%), Gaps = 12/158 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + +S + + ++ V F+ + +++P Q L
Sbjct: 193 GLLSVGVSYRFGQQEAAPVVAPAPAPAPEVQTKHFTLKSDVLFNFNKSTLKPEGQQALDQ 252
Query: 72 LGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L S L + D ++ G D +GS + L +RA +V +Y +++GI + ++
Sbjct: 253 LYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRAQSVVDYLISKGIPSDKISARGM 312
Query: 129 GKEMPSVYGHDE---------DAYAKNRRAIVFLKGCR 157
G+ P + D A +RR + +KG +
Sbjct: 313 GESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEVKGVK 350
>gi|156325823|ref|XP_001618597.1| hypothetical protein NEMVEDRAFT_v1g224978 [Nematostella vectensis]
gi|156199492|gb|EDO26497.1| predicted protein [Nematostella vectensis]
Length = 563
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 7/111 (6%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYA 108
++++D + +RP+ + L L +++ + I AD G+ + L LRRA +
Sbjct: 30 HNIYYDYNKDELRPSSVASLDTLVNFMNDNPSLSVEIYSFADAHGNPQYNRDLSLRRAES 89
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYG------HDEDAYAKNRRAIVFL 153
V +Y GI SRM +G+ MP+ + NRR + +
Sbjct: 90 VMSYLETAGIERSRMTAKGFGESMPAAANKNPDGSDNPAGRQLNRRTELRI 140
>gi|224540643|ref|ZP_03681182.1| hypothetical protein BACCELL_05557 [Bacteroides cellulosilyticus
DSM 14838]
gi|224517715|gb|EEF86820.1| hypothetical protein BACCELL_05557 [Bacteroides cellulosilyticus
DSM 14838]
Length = 299
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 6/114 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHAD----ELGSRNSSIA 100
S+ D++ + + SY I + LS + + + D + L+EG+ D + ++
Sbjct: 162 ISLADNMLYKSGSYEINERAGETLSKIAKIITDYKDYEVLVEGNTDNVPISRTNIRNNWD 221
Query: 101 LGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V + + R+ G+ P E +NRR + +
Sbjct: 222 LSALRASSVVQELQNKYGVDPKRLSAAGRGEYNPITDNDSELGKQRNRRTQIIV 275
>gi|195874240|ref|ZP_02701347.2| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|195630051|gb|EDX48703.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
Length = 358
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 61/158 (38%), Gaps = 12/158 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + +S + + ++ V F+ + +++P Q L
Sbjct: 193 GLLSVGVSYRFGQQEAAPVVAPAPAPAPEVQTKHFTLKSDVLFNFNKSTLKPEGQQALDQ 252
Query: 72 LGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L S L + D ++ G D +GS + L +RA +V +Y +++GI + ++
Sbjct: 253 LYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRAQSVVDYLISKGIPSDKISARGM 312
Query: 129 GKEMPSVYGHDE---------DAYAKNRRAIVFLKGCR 157
G+ P + D A +RR + +KG +
Sbjct: 313 GESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEVKGVK 350
>gi|329850857|ref|ZP_08265702.1| ompA family protein [Asticcacaulis biprosthecum C19]
gi|328841172|gb|EGF90743.1| ompA family protein [Asticcacaulis biprosthecum C19]
Length = 263
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 45/132 (34%), Gaps = 2/132 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ S ++ + + +Y + +L L +
Sbjct: 127 AVAGDNARDAAIEVARSCDDRISAAMGKRRLEYRFGTYELIGDSEPLLDELSKVVADCPA 186
Query: 82 DF--LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
D +I G+ D G ++ + L RA + V RG+ A R++V G P
Sbjct: 187 DVKLIIAGYTDATGDAKANQLISLARAQTAADGLVKRGVDAGRIQVQGMGGAAPVADNAT 246
Query: 140 EDAYAKNRRAIV 151
+ A NRR ++
Sbjct: 247 PEGRAANRRIVI 258
>gi|284038460|ref|YP_003388390.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
gi|283817753|gb|ADB39591.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
Length = 798
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 45/110 (40%), Gaps = 6/110 (5%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
D++++D + +IRP L + + + H D + + L RA +
Sbjct: 685 DNIYYDLNKATIRPDAAVELDKVVELLTKYPAMTIEMRSHTDSRATAVYNKTLSGNRAKS 744
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHD-----EDAYAKNRRAIVFL 153
V Y ++GI+ RM YG+ D E+ + KNRR + +
Sbjct: 745 VVAYLKSKGIAMERMIAKGYGESQLLNKCKDGVECSEEDHQKNRRTEIKI 794
>gi|194443312|ref|YP_002040273.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|200390100|ref|ZP_03216711.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|205357270|ref|ZP_02346426.2| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|194401975|gb|ACF62197.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|199602545|gb|EDZ01091.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|205322778|gb|EDZ10617.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
Length = 358
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 61/158 (38%), Gaps = 12/158 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + +S + + ++ V F+ + +++P Q L
Sbjct: 193 GLLSVGVSYRFGQQEAAPVVAPAPAPAPEVQTKHFTLKSDVLFNFNKSTLKPEGQQALDQ 252
Query: 72 LGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L S L + D ++ G D +GS + L +RA +V +Y +++GI + ++
Sbjct: 253 LYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRAQSVVDYLISKGIPSDKISARGM 312
Query: 129 GKEMPSVYGHDE---------DAYAKNRRAIVFLKGCR 157
G+ P + D A +RR + +KG +
Sbjct: 313 GESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEVKGVK 350
>gi|126662535|ref|ZP_01733534.1| OmpA family protein [Flavobacteria bacterium BAL38]
gi|126625914|gb|EAZ96603.1| OmpA family protein [Flavobacteria bacterium BAL38]
Length = 621
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 59/136 (43%), Gaps = 3/136 (2%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
+ + + + +LN + +FF+ + +I L L + + ++
Sbjct: 483 VKKAENEQVVVEALLNPIIPIITEKEVILQPIFFEFNKSNITADGAAELDKLVAVMNEYP 542
Query: 81 CDFLI-EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH- 138
+ + H D GS + +I L RRA + Y +++G++ R+ +G+ P V
Sbjct: 543 EMVIFAKSHTDSRGSDSYNIKLSDRRAKSTVQYLISKGVAKERISGQGFGESEPKVACKS 602
Query: 139 -DEDAYAKNRRAIVFL 153
E+ +A+NRR+ +
Sbjct: 603 CTEEEHAQNRRSEFLI 618
>gi|194450606|ref|YP_002045072.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|197265555|ref|ZP_03165629.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|194408910|gb|ACF69129.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|197243810|gb|EDY26430.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|321223685|gb|EFX48748.1| Outer membrane protein A precursor [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|326622756|gb|EGE29101.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
Length = 358
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L L S L + D ++ G D +GS + L
Sbjct: 228 TLKSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSE 287
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE---------DAYAKNRRAIVFLK 154
+RA +V +Y +++GI + ++ G+ P + D A +RR + +K
Sbjct: 288 KRAQSVVDYLISKGIPSDKISARGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEVK 347
Query: 155 GCR 157
G +
Sbjct: 348 GVK 350
>gi|168243859|ref|ZP_02668791.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|198244081|ref|YP_002215003.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|197938597|gb|ACH75930.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|205337186|gb|EDZ23950.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|312912061|dbj|BAJ36035.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|323129338|gb|ADX16768.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|326627270|gb|EGE33613.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 369
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L L S L + D ++ G D +GS + L
Sbjct: 239 TLKSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSE 298
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE---------DAYAKNRRAIVFLK 154
+RA +V +Y +++GI + ++ G+ P + D A +RR + +K
Sbjct: 299 KRAQSVVDYLISKGIPSDKISARGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEVK 358
Query: 155 GCR 157
G +
Sbjct: 359 GVK 361
>gi|56413933|ref|YP_151008.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197362856|ref|YP_002142493.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|56128190|gb|AAV77696.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197094333|emb|CAR59845.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 350
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L L S L + D ++ G D +GS + L
Sbjct: 220 TLKSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSE 279
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE---------DAYAKNRRAIVFLK 154
+RA +V +Y +++GI + ++ G+ P + D A +RR + +K
Sbjct: 280 KRAQSVVDYLISKGIPSDKISARGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEVK 339
Query: 155 GCR 157
G +
Sbjct: 340 GVK 342
>gi|16759951|ref|NP_455568.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29142277|ref|NP_805619.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|68052784|sp|Q8Z7S0|OMPA_SALTI RecName: Full=Outer membrane protein A; Flags: Precursor
gi|25298549|pir||AI0626 outer membrane protein A STY1091 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16502245|emb|CAD08196.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29137907|gb|AAO69468.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
Length = 350
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L L S L + D ++ G D +GS + L
Sbjct: 220 TLKSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSE 279
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE---------DAYAKNRRAIVFLK 154
+RA +V +Y +++GI + ++ G+ P + D A +RR + +K
Sbjct: 280 KRAQSVVDYLISKGIPSDKISARGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEVK 339
Query: 155 GCR 157
G +
Sbjct: 340 GVK 342
>gi|16764429|ref|NP_460044.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|205352225|ref|YP_002226026.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207856415|ref|YP_002243066.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|20141670|sp|P02936|OMPA_SALTY RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane major heat-modifiable protein; AltName:
Full=Outer membrane protein 33K; Flags: Precursor
gi|16419585|gb|AAL20003.1| putative membrane component hydrogenase [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|146760785|gb|ABQ44512.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium]
gi|205272006|emb|CAR36850.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|206708218|emb|CAR32518.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|261246287|emb|CBG24095.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267992822|gb|ACY87707.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301157614|emb|CBW17106.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|332987964|gb|AEF06947.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 350
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L L S L + D ++ G D +GS + L
Sbjct: 220 TLKSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSE 279
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE---------DAYAKNRRAIVFLK 154
+RA +V +Y +++GI + ++ G+ P + D A +RR + +K
Sbjct: 280 KRAQSVVDYLISKGIPSDKISARGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEVK 339
Query: 155 GCR 157
G +
Sbjct: 340 GVK 342
>gi|124004618|ref|ZP_01689462.1| OmpA family protein [Microscilla marina ATCC 23134]
gi|123989741|gb|EAY29270.1| OmpA family protein [Microscilla marina ATCC 23134]
Length = 247
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/135 (27%), Positives = 56/135 (41%), Gaps = 2/135 (1%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
G + + ++SL + + + F + S I L+ + +
Sbjct: 112 GSYANKGCPENSTPPVLKNSLSQALAKYTKG-LLFPSGSPQINSGTYTQLNAIVKLLKKY 170
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
LIEGH D +G+ + AL L+RA V YFV +GI+A R+KV G P
Sbjct: 171 PKARLLIEGHTDSVGNTQKNKALSLKRASFVQAYFVRQGIAAHRLKVIGKGATTPIASND 230
Query: 139 DEDAYAKNRRAIVFL 153
+KNRR V L
Sbjct: 231 TAVGRSKNRRIEVRL 245
>gi|296103033|ref|YP_003613179.1| putative outer membrane lipoprotein [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295057492|gb|ADF62230.1| putative outer membrane lipoprotein [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 359
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L L + L + D ++ G D +GS + L
Sbjct: 229 TLKSDVLFNFNKATLKPEGQQALDQLYTQLSNLDPKDGSVVVLGFTDRIGSDAYNQKLSE 288
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
+RA +V +Y +++GI A+++ G+ P + A A +RR + +K
Sbjct: 289 KRAQSVVDYLISKGIPANKISPRGMGESNPVTGNTCDNVKARAALIDCLAPDRRVEIEVK 348
Query: 155 GCR 157
G +
Sbjct: 349 GVK 351
>gi|262403880|ref|ZP_06080438.1| outer membrane protein [Vibrio sp. RC586]
gi|262350384|gb|EEY99519.1| outer membrane protein [Vibrio sp. RC586]
Length = 337
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 45/107 (42%), Gaps = 3/107 (2%)
Query: 49 GDSVFFDTSSYSI---RPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRR 105
+ FD S I R ++ + + + + GH D +GS+ ++ L +R
Sbjct: 230 SSDIHFDFDSSEIILTRSLSKKISQVIKFLFDNPEIKIEVIGHTDSVGSQEYNLVLSKQR 289
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
A ++ + G+S +R+ + G++ P A+NRR +
Sbjct: 290 ATSIAQLIIDGGVSINRINIIGKGEDEPITTNSHAMGRAQNRRVEIK 336
>gi|225382176|gb|ACN89316.1| hypothetical protein VEPGS_0610 [Vibrio alginolyticus]
Length = 430
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 47/121 (38%), Gaps = 4/121 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+N LQ++ S+ F++ S + V+S L LE ++ GH D+
Sbjct: 304 INVEPLQDRVRISLKSQDLFESGSADVVAYIQPVISKLARTLESTQGKIIVTGHTDDRPI 363
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
S+ L L RA A+ ++ R+ G P V ++ A NRR
Sbjct: 364 FTSKYPSNWHLSLARATAMSEQLISNSALEGRVIPEGLGDARPLVENSSDENRAINRRIE 423
Query: 151 V 151
+
Sbjct: 424 I 424
>gi|218700524|ref|YP_002408153.1| outer membrane protein A [Escherichia coli IAI39]
gi|331646217|ref|ZP_08347320.1| outer membrane protein A [Escherichia coli M605]
gi|218370510|emb|CAR18317.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli IAI39]
gi|331044969|gb|EGI17096.1| outer membrane protein A [Escherichia coli M605]
Length = 374
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F + +++P L L S L + D ++ G+ D +GS + AL
Sbjct: 244 TLKSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQALSE 303
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RRA +V +Y +++GI A ++ G+ P + A +RR + +K
Sbjct: 304 RRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVK 363
Query: 155 GCR 157
G +
Sbjct: 364 GIK 366
>gi|213161917|ref|ZP_03347627.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213425902|ref|ZP_03358652.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213622699|ref|ZP_03375482.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
gi|289826790|ref|ZP_06545725.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
Length = 369
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L L S L + D ++ G D +GS + L
Sbjct: 239 TLKSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSE 298
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE---------DAYAKNRRAIVFLK 154
+RA +V +Y +++GI + ++ G+ P + D A +RR + +K
Sbjct: 299 KRAQSVVDYLISKGIPSDKISARGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEVK 358
Query: 155 GCR 157
G +
Sbjct: 359 GVK 361
>gi|161614736|ref|YP_001588701.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|168821824|ref|ZP_02833824.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|238911107|ref|ZP_04654944.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|161364100|gb|ABX67868.1| hypothetical protein SPAB_02488 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|205341689|gb|EDZ28453.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|320085284|emb|CBY95068.1| Outer membrane protein A Flags: Precursor [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
Length = 369
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L L S L + D ++ G D +GS + L
Sbjct: 239 TLKSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSE 298
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE---------DAYAKNRRAIVFLK 154
+RA +V +Y +++GI + ++ G+ P + D A +RR + +K
Sbjct: 299 KRAQSVVDYLISKGIPSDKISARGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEVK 358
Query: 155 GCR 157
G +
Sbjct: 359 GVK 361
>gi|149197358|ref|ZP_01874409.1| chemotaxis MotB protein, putative [Lentisphaera araneosa HTCC2155]
gi|149139376|gb|EDM27778.1| chemotaxis MotB protein, putative [Lentisphaera araneosa HTCC2155]
Length = 265
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 49/124 (39%), Gaps = 7/124 (5%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRN 96
L + S S+ + + F + + ++ +VL+ + E D +EGH D +
Sbjct: 123 KELNGRISLSMENKILFPSGTANLGDRGTEVLNKISDALSETTDHIIRVEGHTDNVPLSG 182
Query: 97 SSIALGLRRAYA------VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
+ A V + + +++ ++ + G+ P +D A+NRR
Sbjct: 183 KGLYKNNWELSAARALSVVKELLITQQLNSKDIEAVAMGEFHPVADNTTKDGRAQNRRIE 242
Query: 151 VFLK 154
++L
Sbjct: 243 IYLS 246
>gi|325954396|ref|YP_004238056.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
gi|323437014|gb|ADX67478.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
Length = 297
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 50/129 (38%), Gaps = 7/129 (5%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+ Q S+ + + F T + +R I L L S +++D + LIEGH D
Sbjct: 155 GKGITVYEKNGQIYVSMENKLLFSTGKWDVRQEGISALVQLSSVLKKQNDLNILIEGHTD 214
Query: 91 ELGS------RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+ + L + RA AV G+ ++M K +P E A
Sbjct: 215 SVPYGAKQGDVQDNWDLSVMRATAVTKILQKDGVRPTQMTAAGRSKYIPIGDNATESGKA 274
Query: 145 KNRRAIVFL 153
KNRR + +
Sbjct: 275 KNRRVEIII 283
>gi|269967472|ref|ZP_06181529.1| hypothetical protein VMC_29590 [Vibrio alginolyticus 40B]
gi|269827913|gb|EEZ82190.1| hypothetical protein VMC_29590 [Vibrio alginolyticus 40B]
Length = 430
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 47/121 (38%), Gaps = 4/121 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+N LQ++ S+ F++ S + V+S L LE ++ GH D+
Sbjct: 304 INVEPLQDRVRISLKSQDLFESGSADVVAYIQPVISKLARTLESTQGKIIVTGHTDDRPI 363
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
S+ L L RA A+ ++ R+ G P V ++ A NRR
Sbjct: 364 FTSKYPSNWHLSLARATAMSEQLISNSALEGRVIPEGLGDARPLVENSSDENRAINRRIE 423
Query: 151 V 151
+
Sbjct: 424 I 424
>gi|153807056|ref|ZP_01959724.1| hypothetical protein BACCAC_01333 [Bacteroides caccae ATCC 43185]
gi|149130176|gb|EDM21386.1| hypothetical protein BACCAC_01333 [Bacteroides caccae ATCC 43185]
Length = 278
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 46/127 (36%), Gaps = 6/127 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
L + ++ D + F + S + + L L ++ D D IEGH D
Sbjct: 135 SDELTVREKDGKVYVAMSDKLLFQSGSARLDKRGEEALGKLAEVLNKQTDIDVFIEGHTD 194
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ L + RA +V + + +++ + G+ MP + +K
Sbjct: 195 NKPINTVQFKDNWDLSVIRATSVVRILIKNYNVNPLQIQPSGRGEYMPVDDNETAEGRSK 254
Query: 146 NRRAIVF 152
NRR +
Sbjct: 255 NRRTEII 261
>gi|758341|emb|CAA26037.1| outer membrane protein (ompA) [Salmonella enterica subsp. enterica
serovar Typhimurium]
Length = 350
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L L L + D ++ G D +GS + L
Sbjct: 220 TLKSDVLFNFNKSTLKPEGQQALDQLYIQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSE 279
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE---------DAYAKNRRAIVFLK 154
+RA +V +Y +++GI + ++ G+ P + D A +RR + +K
Sbjct: 280 KRAQSVVDYLISKGIPSDKISARGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEVK 339
Query: 155 GCR 157
G +
Sbjct: 340 GVK 342
>gi|254248921|ref|ZP_04942241.1| OmpA/MotB [Burkholderia cenocepacia PC184]
gi|124875422|gb|EAY65412.1| OmpA/MotB [Burkholderia cenocepacia PC184]
Length = 223
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 56/153 (36%), Gaps = 15/153 (9%)
Query: 16 MSISGIDNLDTKISSP----------DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPAD 65
+ + +D + P + ++ + + F+ + P
Sbjct: 69 AATAAVDTAKADPAPPWLALLDSLKSNGRISLVKAPHGVEIGIDAKILFNVGDARLLPDS 128
Query: 66 IQVLSNLGSWLEKHDC-DFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISA 120
VL+ + L H D L+EGH D + S+ L RA +V Y RG++
Sbjct: 129 SPVLNQIAQALSAHTTGDILVEGHTDSVPIANAKYESNWELSSARAGSVVRYLTERGVAP 188
Query: 121 SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
R+ P V G D + A+NRR +F+
Sbjct: 189 HRLAAIGRADTQPLVAGDDAASRARNRRVTIFV 221
>gi|330830039|ref|YP_004392991.1| chemotaxis protein MotB [Aeromonas veronii B565]
gi|328805175|gb|AEB50374.1| Chemotaxis protein MotB [Aeromonas veronii B565]
Length = 291
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 44/129 (34%), Gaps = 5/129 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
L L Q +G+ F S ++P I +++ + L ++ GH D +
Sbjct: 153 LEVEQLGSQLVIRIGEKALFPADSAFLQPQFIPLVNKIAGILANIPGQVVVTGHTDNSQA 212
Query: 95 ----RNSSIALGLRRAYA-VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
++ L + RA + V + A R+ P + NRR
Sbjct: 213 PVELYRNNWELSVLRASSIVQTMLTNPQLDARRVIAQGVADTQPRFANDTPEHRQANRRV 272
Query: 150 IVFLKGCRA 158
+ L +A
Sbjct: 273 DITLSQGKA 281
>gi|170695384|ref|ZP_02886530.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
gi|170139784|gb|EDT07966.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
Length = 248
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 40/101 (39%), Gaps = 1/101 (0%)
Query: 54 FDTSSYSIRPADIQVL-SNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F T S ++ P + L + + + + G+ D+ GS ++AL RA AV Y
Sbjct: 145 FATDSATLSPIAKENLDHFMAANKGANLRRVTVTGYTDKTGSEAHNLALSKARAEAVVQY 204
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G+ + G P + ++NRR V +
Sbjct: 205 LRDGGLEGEQFVAQGLGSADPVASNATAEGRSQNRRVDVRV 245
>gi|168233443|ref|ZP_02658501.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|194472870|ref|ZP_03078854.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197248715|ref|YP_002145940.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|194459234|gb|EDX48073.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197212418|gb|ACH49815.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|205332492|gb|EDZ19256.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
Length = 371
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L L S L + D ++ G D +GS + L
Sbjct: 241 TLKSDVLFNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSE 300
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE---------DAYAKNRRAIVFLK 154
+RA +V +Y +++GI + ++ G+ P + D A +RR + +K
Sbjct: 301 KRAQSVVDYLISKGIPSDKISARGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEVK 360
Query: 155 GCR 157
G +
Sbjct: 361 GVK 363
>gi|90021170|ref|YP_526997.1| hypothetical protein Sde_1523 [Saccharophagus degradans 2-40]
gi|89950770|gb|ABD80785.1| OmpA/MotB [Saccharophagus degradans 2-40]
Length = 469
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 45/125 (36%), Gaps = 4/125 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+L+ S + + F + + +I P+ +L + LE ++ GH D
Sbjct: 331 GILSVQDYPTHTSIVLHNQELFTSGNINITPSFEPILDKIAKALEAIPGRIIVSGHTDNE 390
Query: 93 GS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
S+ L L RA V Y A SR+ G P + A NRR
Sbjct: 391 SIRTPRYPSNWHLSLARASEVVKYLAASADLKSRLLPEGRGANEPIMSNDTAAGRAHNRR 450
Query: 149 AIVFL 153
++ +
Sbjct: 451 VVIDV 455
>gi|315124911|ref|YP_004066915.1| outer membrane fibronectin-binding protein [Campylobacter jejuni
subsp. jejuni ICDCCJ07001]
gi|315018633|gb|ADT66726.1| outer membrane fibronectin-binding protein [Campylobacter jejuni
subsp. jejuni ICDCCJ07001]
Length = 319
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 52/144 (36%), Gaps = 3/144 (2%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+ ++ + + ++ F +I P + + +
Sbjct: 176 AVEEVADTRATPQAKCPVEPREGALLDENGCEKTISLEGHFGFDKTTINPTFQEKIKEIA 235
Query: 74 SW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
E D ++EGH D +GSR + L RRA +V N G+ SR+K YG++
Sbjct: 236 KVLDENERYDTILEGHTDNIGSRAYNQKLSERRAKSVANELEKYGVEKSRIKTVGYGQDN 295
Query: 133 PSVYGHDEDAYAKNRRAI--VFLK 154
++ A NRR L+
Sbjct: 296 SRSSNDTKEGRADNRRVDAKFILR 319
>gi|167590675|ref|ZP_02383063.1| hypothetical protein BuboB_35381 [Burkholderia ubonensis Bu]
Length = 394
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 19/127 (14%), Positives = 42/127 (33%), Gaps = 4/127 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
++ + + F ++ + +++ + + + + + G+ D
Sbjct: 266 AAGTVSVDEDARHSTVTFRGDAMFPPGKAAVNASSGPLIAKIAAEIARVPGKVTVLGYTD 325
Query: 91 ELG----SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ S+ AL RA V A G+ A+R+ G P A N
Sbjct: 326 NAPVRGSAFPSNEALSDARATQVMQMLQAAGVPANRLAALGKGAANPIGDNRTVPGRALN 385
Query: 147 RRAIVFL 153
RR + +
Sbjct: 386 RRVEITV 392
>gi|2062640|gb|AAC35418.1| CadF precursor [Campylobacter coli]
Length = 326
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 53/136 (38%), Gaps = 4/136 (2%)
Query: 23 NLDTKISSPDTVLNESSLQE-QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
+ T+ P + L E ++ F I PA + + + E
Sbjct: 191 AVPTQSQCPAEPREGAMLDENGCEKTISFEGHFGFDKVDINPAFEEKIKEIAQLLDENAR 250
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
D ++EGH D +GSR + L RRA +V G+ R++ YG++ P +
Sbjct: 251 YDTILEGHTDNIGSRAYNQKLSERRAESVAKELEKFGVDKDRIQTVGYGQDKPRSRNETK 310
Query: 141 DAYAKNRRAI--VFLK 154
+ A NRR L+
Sbjct: 311 EGRADNRRVDAKFILR 326
>gi|324009900|gb|EGB79119.1| outer membrane protein A [Escherichia coli MS 57-2]
Length = 354
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F + +++P L L S L + D ++ G+ D +GS + AL
Sbjct: 224 TLKSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQALSE 283
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RRA +V +Y +++GI A ++ G+ P + A +RR + +K
Sbjct: 284 RRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVK 343
Query: 155 GCR 157
G +
Sbjct: 344 GIK 346
>gi|330010302|ref|ZP_08306729.1| outer membrane protein A [Klebsiella sp. MS 92-3]
gi|328534592|gb|EGF61172.1| outer membrane protein A [Klebsiella sp. MS 92-3]
Length = 364
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L L + ++ D ++ G+ D +GS + L
Sbjct: 234 TLKSDVLFNFNKATLKPEGQQALDQLYTQLSNMDPKDGSAVVLGYTDRIGSEAYNQQLSE 293
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
+RA +V +Y VA+GI A ++ G+ P + A A +RR + +K
Sbjct: 294 KRAQSVVDYLVAKGIPAGKISARGMGESNPVTGNTCDNVKARAALIDCLAPDRRVEIEVK 353
Query: 155 GCR 157
G +
Sbjct: 354 GYK 356
>gi|300982950|ref|ZP_07176384.1| outer membrane protein A [Escherichia coli MS 200-1]
gi|300307039|gb|EFJ61559.1| outer membrane protein A [Escherichia coli MS 200-1]
gi|315296266|gb|EFU55573.1| outer membrane protein A [Escherichia coli MS 16-3]
gi|324012909|gb|EGB82128.1| outer membrane protein A [Escherichia coli MS 60-1]
Length = 354
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/158 (18%), Positives = 60/158 (37%), Gaps = 12/158 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + +S + + ++ V F + +++P L
Sbjct: 189 GMLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLKSDVLFTFNKATLKPEGQAALDQ 248
Query: 72 LGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L S L + D ++ G+ D +GS + AL RRA +V +Y +++GI A ++
Sbjct: 249 LYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQALSERRAQSVVDYLISKGIPADKISARGM 308
Query: 129 GKEMPS--VYGHDEDAYAK-------NRRAIVFLKGCR 157
G+ P + A +RR + +KG +
Sbjct: 309 GESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKGIK 346
>gi|315287600|gb|EFU47006.1| outer membrane protein A [Escherichia coli MS 110-3]
Length = 354
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/158 (18%), Positives = 60/158 (37%), Gaps = 12/158 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + +S + + ++ V F + +++P L
Sbjct: 189 GMLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLKSDVLFTFNKATLKPEGQAALDQ 248
Query: 72 LGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L S L + D ++ G+ D +GS + AL RRA +V +Y +++GI A ++
Sbjct: 249 LYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQALSERRAQSVVDYLISKGIPADKISARGM 308
Query: 129 GKEMPS--VYGHDEDAYAK-------NRRAIVFLKGCR 157
G+ P + A +RR + +KG +
Sbjct: 309 GESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKGIK 346
>gi|218553544|ref|YP_002386457.1| outer membrane protein A [Escherichia coli IAI1]
gi|331676747|ref|ZP_08377443.1| outer membrane protein A [Escherichia coli H591]
gi|218360312|emb|CAQ97862.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli IAI1]
gi|331075436|gb|EGI46734.1| outer membrane protein A [Escherichia coli H591]
Length = 374
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 60/158 (37%), Gaps = 12/158 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + +S + + ++ V F+ + +++P L
Sbjct: 209 GLLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLKSDVLFNFNKATLKPEGQAALDQ 268
Query: 72 LGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L S L + D ++ G+ D +GS + L RRA +V +Y +++GI A ++
Sbjct: 269 LYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRAQSVVDYLISKGIPADKISARGM 328
Query: 129 GKEMPS--VYGHDEDAYAK-------NRRAIVFLKGCR 157
G+ P + A +RR + +KG +
Sbjct: 329 GESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKGIK 366
>gi|91224571|ref|ZP_01259832.1| hypothetical protein V12G01_07518 [Vibrio alginolyticus 12G01]
gi|91190459|gb|EAS76727.1| hypothetical protein V12G01_07518 [Vibrio alginolyticus 12G01]
Length = 430
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 47/121 (38%), Gaps = 4/121 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+N LQ++ S+ F++ S + V+S L LE ++ GH D+
Sbjct: 304 INVEPLQDRVRISLKSQDLFESGSADVVAYIQPVISKLARTLESTQGKIIVTGHTDDRPI 363
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
S+ L L RA A+ ++ R+ G P V ++ A NRR
Sbjct: 364 FTSKYPSNWHLSLARATAMSEQLISNSALEGRVIPEGLGDARPLVENSSDENRAINRRIE 423
Query: 151 V 151
+
Sbjct: 424 I 424
>gi|146300076|ref|YP_001194667.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
UW101]
gi|146154494|gb|ABQ05348.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
Length = 727
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 5/110 (4%)
Query: 52 VFFDTSSYSIRPA-----DIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
+FF T ++ A ++ + + F I GH D +G+ + L +RA
Sbjct: 617 IFFTTGKATLSDAKMGETSGRLDAIKEILKNYPNAKFAINGHTDNVGNAKVNQKLSEQRA 676
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
V + + +G++ + + YG P A+NRR + G
Sbjct: 677 KVVMDLLIEKGVNPANLTSKGYGASKPVKSNKTASGRAENRRTEIVYLGN 726
>gi|332140499|ref|YP_004426237.1| Thrombospondin type 3 repeat:OmpA/MotB [Alteromonas macleodii str.
'Deep ecotype']
gi|327550521|gb|AEA97239.1| Thrombospondin type 3 repeat:OmpA/MotB [Alteromonas macleodii str.
'Deep ecotype']
Length = 218
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 57/133 (42%), Gaps = 6/133 (4%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
G + + + S+ D L+++ + + F ++ F ++S + P L ++ L +
Sbjct: 80 GCEAKEPEPSAADFTLDDAQIIDSFKV----NIEFTSNSTDVLPEYENNLQDVIDALNAN 135
Query: 80 DCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVYG 137
+I GHA G + L RRA AV + + + R+ YG+ P V
Sbjct: 136 PNSGVIIHGHASLDGDAAYNQRLSERRAKAVASLLMTKADIAPRRITAVGYGESRPLVNE 195
Query: 138 HDEDAYAKNRRAI 150
E A A+NRR
Sbjct: 196 ESEAANARNRRIE 208
>gi|194434867|ref|ZP_03067114.1| OmpA domain protein [Shigella dysenteriae 1012]
gi|194416886|gb|EDX33008.1| OmpA domain protein [Shigella dysenteriae 1012]
gi|332089116|gb|EGI94226.1| ompA family protein [Shigella dysenteriae 155-74]
Length = 550
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 2/126 (1%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGH 88
P+ + ++ + + + FD ++ +VL + L + K L+ G+
Sbjct: 414 PPEQKMEVTASLQAQTVRLDSMSLFDVGQARLKDGSTKVLVDALVNIRAKPGWLILVAGY 473
Query: 89 ADELGSRNSSIALGLRRAYAVFNY-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
D G S+ L LRRA AV N+ I A+ V G+ P+ A NR
Sbjct: 474 TDATGDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQGLGESQPAATNDTPQGRAVNR 533
Query: 148 RAIVFL 153
R + L
Sbjct: 534 RVKISL 539
>gi|331269325|ref|YP_004395817.1| chemotaxis motB protein [Clostridium botulinum BKT015925]
gi|329125875|gb|AEB75820.1| chemotaxis motB protein [Clostridium botulinum BKT015925]
Length = 242
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 54/130 (41%), Gaps = 5/130 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
D + + D++ FD++ I+ ++L + LE +IEGH D
Sbjct: 108 DNTVQVKRDARGIIIELKDNILFDSAQAEIKAPSKEILDKISRLLESVPNGIIIEGHTDN 167
Query: 92 LGSRNS----SIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ N+ + L +RA V YF ++G++ + + YG+ P + AKN
Sbjct: 168 VPIHNTKYESNWELSTQRAVNVLKYFVESKGLAPDKFQAAGYGEFHPIEKNDNYADRAKN 227
Query: 147 RRAIVFLKGC 156
RR + +
Sbjct: 228 RRVNILITAS 237
>gi|306812596|ref|ZP_07446789.1| outer membrane protein A [Escherichia coli NC101]
gi|305853359|gb|EFM53798.1| outer membrane protein A [Escherichia coli NC101]
Length = 365
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F + +++P L L S L + D ++ G+ D +GS + AL
Sbjct: 235 TLKSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQALSE 294
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RRA +V +Y +++GI A ++ G+ P + A +RR + +K
Sbjct: 295 RRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVK 354
Query: 155 GCR 157
G +
Sbjct: 355 GIK 357
>gi|292487869|ref|YP_003530744.1| outer membrane protein A [Erwinia amylovora CFBP1430]
gi|292899094|ref|YP_003538463.1| outer membrane protein A [Erwinia amylovora ATCC 49946]
gi|291198942|emb|CBJ46052.1| outer membrane protein A [Erwinia amylovora ATCC 49946]
gi|291553291|emb|CBA20336.1| Outer membrane protein A precursor [Erwinia amylovora CFBP1430]
gi|312171991|emb|CBX80248.1| Outer membrane protein A precursor [Erwinia amylovora ATCC
BAA-2158]
Length = 355
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/158 (19%), Positives = 63/158 (39%), Gaps = 12/158 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
++ + +S D + + E ++ V F + +++P Q L
Sbjct: 190 SMLSVGVSYRFGQDEAAPVVAPAPAPAPVVETKRFTLKSDVLFTFNKSTLKPEGQQALDQ 249
Query: 72 LGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L + L + D ++ G+ D +GS + L +RA +V +Y V++GI ++++
Sbjct: 250 LYTQLSNLDPKDGSVVVLGYTDRIGSEQYNQKLSEKRAQSVVDYLVSKGIPSNKISARGE 309
Query: 129 GKEMPS--VYGHDEDAY-------AKNRRAIVFLKGCR 157
GK P A +RR + +KG +
Sbjct: 310 GKSNPVTGNTCDSVKGRKALIDCLAPDRRVEIQVKGIK 347
>gi|150397861|ref|YP_001328328.1| hypothetical protein Smed_2663 [Sinorhizobium medicae WSM419]
gi|150029376|gb|ABR61493.1| OmpA/MotB domain protein [Sinorhizobium medicae WSM419]
Length = 342
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 41/102 (40%), Gaps = 5/102 (4%)
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG-----SRNSSIALGLRRAYAVFN 111
+ +L + + ++GH D++ + L RA +V
Sbjct: 238 GQAEMTKLAAAILDLAREIPAEINWVLRVDGHTDDVQLSGIGRFRDNWELSSARATSVVK 297
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +++G+ A R+ +G+ P ++A A+NRR + L
Sbjct: 298 FLISKGVPADRLVAAGFGEYQPIAPSDTQEARAQNRRIELKL 339
>gi|26246978|ref|NP_753018.1| outer membrane protein A [Escherichia coli CFT073]
gi|26107378|gb|AAN79561.1|AE016758_165 Outer membrane protein A precursor [Escherichia coli CFT073]
Length = 379
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F + +++P L L S L + D ++ G+ D +GS + AL
Sbjct: 249 TLKSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQALSE 308
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RRA +V +Y +++GI A ++ G+ P + A +RR + +K
Sbjct: 309 RRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVK 368
Query: 155 GCR 157
G +
Sbjct: 369 GIK 371
>gi|324113719|gb|EGC07694.1| OmpA transmembrane domain-containing protein [Escherichia
fergusonii B253]
gi|325496887|gb|EGC94746.1| outer membrane protein A [Escherichia fergusonii ECD227]
Length = 359
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 60/158 (37%), Gaps = 12/158 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + +S + + ++ V F+ + +++P L
Sbjct: 194 GLLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLKSDVLFNFNKATLKPEGQAALDQ 253
Query: 72 LGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L S L + D ++ G+ D +GS + L RRA +V +Y +++GI A ++
Sbjct: 254 LYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRAQSVVDYLISKGIPADKISARGM 313
Query: 129 GKEMPS--VYGHDEDAYAK-------NRRAIVFLKGCR 157
G+ P + A +RR + +KG +
Sbjct: 314 GESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKGIK 351
>gi|283484404|gb|ADB23432.1| OmpA [Cronobacter sakazakii]
Length = 347
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L L S L + D ++ G D +GS + L
Sbjct: 217 TLKSDVLFNFNKATLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSE 276
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
+RA +V +Y +++GI ++++ G+ P + A +RR + +K
Sbjct: 277 KRAQSVVDYLISKGIPSNKISARGMGESNPVTGNTCDNVKPRAALIECLGPDRRVEIEVK 336
Query: 155 GCR 157
G +
Sbjct: 337 GVK 339
>gi|149185339|ref|ZP_01863656.1| outer membrane protein [Erythrobacter sp. SD-21]
gi|148831450|gb|EDL49884.1| outer membrane protein [Erythrobacter sp. SD-21]
Length = 210
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 3/132 (2%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDF 83
+ + + ++E+ ++ D V F T S +I A L N+ + ++ +
Sbjct: 64 EEQTAGSGIDVSETDGGNAILVNLPDGVTFATGSATINSAFRNTLDNVAANLVQYPNSLI 123
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK--EMPSVYGHDED 141
+ G+ D GS + + L +RA AV NY ++RG+S+SR++ YG+ E V D
Sbjct: 124 DVYGYTDTTGSDSLNQRLSEQRAQAVANYLISRGVSSSRIRWQGYGEQYEHLKVKTADGV 183
Query: 142 AYAKNRRAIVFL 153
NRR + +
Sbjct: 184 NEPMNRRVEIKI 195
>gi|257125599|ref|YP_003163713.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b]
gi|257049538|gb|ACV38722.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b]
Length = 256
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
S + +T+ +S + L+ + + + + F +S +++ VL ++ +++E+
Sbjct: 115 SASLDTNTQENSINNPQKVQILKSEIITLRAEDLNFHKNSINLKEEAYSVLKDIKNYIEE 174
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYG 137
+D I G+ DE G + L LRRA V + + G+S R+ + G+ P
Sbjct: 175 NDYLVSIVGYTDESGIAAYNNRLSLRRAEKVSSKLLELGLSKDRILDLIGRGENNPINSN 234
Query: 138 HDEDAYAKNRRAIV 151
++ +NRR
Sbjct: 235 ETKEGRERNRRVEF 248
>gi|91229460|ref|ZP_01262927.1| flagellar motor protein [Vibrio alginolyticus 12G01]
gi|91187396|gb|EAS73750.1| flagellar motor protein [Vibrio alginolyticus 12G01]
Length = 186
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 46/128 (35%), Gaps = 5/128 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ +L +Q + + F S ++P ++ + ++ + GH D
Sbjct: 45 QGAIEVENLGQQIVIRMREKGAFPEGSAFLQPKFRPLVRQIAELVKDVPGIVRVSGHTDN 104
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S+ L +RA +V RG S R++V P + +D A N
Sbjct: 105 RPLDSELYRSNWDLSSQRAVSVAQEMEKVRGFSHQRLRVRGMADTEPLLPNDSDDNRALN 164
Query: 147 RRAIVFLK 154
RR + +
Sbjct: 165 RRVEISIM 172
>gi|317491503|ref|ZP_07949939.1| OmpA transmembrane domain-containing protein [Enterobacteriaceae
bacterium 9_2_54FAA]
gi|316921050|gb|EFV42373.1| OmpA transmembrane domain-containing protein [Enterobacteriaceae
bacterium 9_2_54FAA]
Length = 351
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/157 (21%), Positives = 66/157 (42%), Gaps = 12/157 (7%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL 72
+ + ++ D +P + + E ++ V F+ + +++P Q L +
Sbjct: 187 LLSVGVTYRFGQDEAAPAPAPAPAPAPVVETKRFTLKSDVLFNFNKATLKPQGQQALDQM 246
Query: 73 G---SWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
S L+ D ++ G+ D +GS + L +RA +V +Y V++GI A ++ G
Sbjct: 247 YAQLSNLDPKDGSVVVLGYTDRIGSEQYNQKLSEQRAQSVVDYLVSKGIPADKISARGMG 306
Query: 130 KEMPS--VYGHDEDAYAK-------NRRAIVFLKGCR 157
K P + A A +RR + +KG +
Sbjct: 307 KADPVTGSTCDNVKARAALIECLAPDRRVEIEVKGIK 343
>gi|317505336|ref|ZP_07963264.1| OmpA family protein [Prevotella salivae DSM 15606]
gi|315663550|gb|EFV03289.1| OmpA family protein [Prevotella salivae DSM 15606]
Length = 284
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 11/119 (9%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADE---------LGSR 95
S+ D++ + + SY I + L + ++ D D LIEG+ D + +
Sbjct: 147 ISLADNMLYRSGSYEINDRAEETLGKIAKIIMDYKDYDVLIEGNTDNVPVNTKSAAMKNI 206
Query: 96 NSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L RA +V Y +S R+ G+ P E +NRR + +
Sbjct: 207 RNNWDLSALRASSVVQYLQDHFGVSPKRLTAGGRGEYNPVATNDTELGKQRNRRTQIII 265
>gi|227538215|ref|ZP_03968264.1| OmpA family protein [Sphingobacterium spiritivorum ATCC 33300]
gi|227241924|gb|EEI91939.1| OmpA family protein [Sphingobacterium spiritivorum ATCC 33300]
Length = 650
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 6/122 (4%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRN 96
+ ++ V D++++D + IRP +VL L + + E + H D GS +
Sbjct: 526 QPVNKEGIVFVLDNIYYDFNKSDIRPDAAKVLDQLVNTMTENPTLQIELSSHTDSRGSDS 585
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH-----DEDAYAKNRRAIV 151
++ L RRA + Y +++GI+ R+ YG+ E+ + NRR V
Sbjct: 586 YNMKLSDRRAKSAVEYIISKGIAKERLVSKGYGESKLVNECANGVKCTEEQHQANRRTEV 645
Query: 152 FL 153
+
Sbjct: 646 KV 647
>gi|77359764|ref|YP_339339.1| chemotaxis protein [Pseudoalteromonas haloplanktis TAC125]
gi|76874675|emb|CAI85896.1| putative chemotaxis protein [Pseudoalteromonas haloplanktis TAC125]
Length = 319
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 50/127 (39%), Gaps = 4/127 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
D + Q+ + + F + S + QV+ + + D + G+ D
Sbjct: 140 DGEASLELSQDWLIIELSSGMLFSSGSSVAQVRAKQVVKIIKDIIAPVDNYIRVRGYTDN 199
Query: 92 L----GSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
S+ L + RA AV + GI+++RM + YG+ P + A+NR
Sbjct: 200 QTIGNEMYRSNWELSVARATAVLVELESLGINSARMAIEGYGQYSPFATNDTKQGRAENR 259
Query: 148 RAIVFLK 154
+ ++ L
Sbjct: 260 KVVIALS 266
>gi|254439344|ref|ZP_05052838.1| OmpA family protein [Octadecabacter antarcticus 307]
gi|198254790|gb|EDY79104.1| OmpA family protein [Octadecabacter antarcticus 307]
Length = 637
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 48/124 (38%), Gaps = 1/124 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHA 89
E L + + + + F+ SS +I A +L ++ L++ D I G+
Sbjct: 477 AALPTTEECLGQIMNVTESRKIRFEPSSATIAGAGAAILDDIKEILQRCADLRIEIAGYT 536
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D GS + + L +RA AV R + + + YG+ P D NRR
Sbjct: 537 DSQGSEDGNQRLSQQRADAVLEGLRVRRVPVASFRSVGYGEADPIADNETADGREANRRI 596
Query: 150 IVFL 153
L
Sbjct: 597 EFSL 600
>gi|94500546|ref|ZP_01307077.1| flagellar motor protein [Oceanobacter sp. RED65]
gi|94427336|gb|EAT12315.1| flagellar motor protein [Oceanobacter sp. RED65]
Length = 331
Score = 69.1 bits (167), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 41/121 (33%), Gaps = 6/121 (4%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG-----SRNS 97
+ + + F+ + + VL + L + +EGH D NS
Sbjct: 175 KIVIRIREKGSFNAGGAYVEDEFLPVLDTIREVLVEVPGRISVEGHTDSTPLGRGGRYNS 234
Query: 98 SIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
+ L RA AV Y R +V +G P + AKNRR + +
Sbjct: 235 NWELSAARAAAVAEYLFIAPEMPESRFRVVGHGSVRPVAENKTAEGRAKNRRVEIIVLRS 294
Query: 157 R 157
+
Sbjct: 295 K 295
>gi|329943316|ref|ZP_08292090.1| ompA family protein [Chlamydophila psittaci Cal10]
gi|332287892|ref|YP_004422793.1| putative peptidoglycan-associated protein [Chlamydophila psittaci
6BC]
gi|313848464|emb|CBY17468.1| putative peptidoglycan-associated protein (periplasmic)
[Chlamydophila psittaci RD1]
gi|325507092|gb|ADZ18730.1| putative peptidoglycan-associated protein [Chlamydophila psittaci
6BC]
gi|328814863|gb|EGF84853.1| ompA family protein [Chlamydophila psittaci Cal10]
gi|328915156|gb|AEB55989.1| outer membrane protein, OmpA family [Chlamydophila psittaci 6BC]
Length = 191
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/106 (35%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
Query: 50 DSVFFDTSSYSIRPADIQVLSN--LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++ F T SY+I+ + + + + + IEGH DE G+ + ++ALG RRA
Sbjct: 83 RNITFATDSYTIKGEENLAILSSLVRQMQKSPKMTLYIEGHTDERGAASYNLALGARRAN 142
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV + + +GISA R+ SYGKE P GH+E A+ +NRR +
Sbjct: 143 AVKQHLIKQGISADRLFTVSYGKEQPINLGHNELAWQQNRRTEFKI 188
>gi|168237123|ref|ZP_02662181.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|194734413|ref|YP_002114070.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|194709915|gb|ACF89136.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197289811|gb|EDY29172.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|322616444|gb|EFY13353.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322619695|gb|EFY16570.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322622609|gb|EFY19454.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322629758|gb|EFY26533.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322632520|gb|EFY29266.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322636985|gb|EFY33688.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322641475|gb|EFY38113.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322646058|gb|EFY42574.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322649640|gb|EFY46071.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322654059|gb|EFY50382.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322658591|gb|EFY54853.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322663448|gb|EFY59650.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322670184|gb|EFY66324.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322671420|gb|EFY67542.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322676776|gb|EFY72843.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322682700|gb|EFY78719.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322686380|gb|EFY82362.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323195127|gb|EFZ80309.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323199809|gb|EFZ84898.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323202802|gb|EFZ87838.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323209073|gb|EFZ94010.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323213664|gb|EFZ98452.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323217967|gb|EGA02682.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323221999|gb|EGA06386.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323226572|gb|EGA10777.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323229768|gb|EGA13891.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323232993|gb|EGA17089.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323240728|gb|EGA24770.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323243044|gb|EGA27065.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323249793|gb|EGA33695.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323252735|gb|EGA36573.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323259149|gb|EGA42793.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323259972|gb|EGA43600.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323268028|gb|EGA51507.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323269876|gb|EGA53325.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
Length = 369
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L L S L + D ++ G D +GS + L
Sbjct: 239 TLKSDVLFNFNKATLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSE 298
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE---------DAYAKNRRAIVFLK 154
+RA +V +Y +++GI + ++ G+ P + D A +RR + +K
Sbjct: 299 KRAQSVVDYLISKGIPSDKISARGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEVK 358
Query: 155 GCR 157
G +
Sbjct: 359 GVK 361
>gi|149186387|ref|ZP_01864700.1| hypothetical protein ED21_22898 [Erythrobacter sp. SD-21]
gi|148829976|gb|EDL48414.1| hypothetical protein ED21_22898 [Erythrobacter sp. SD-21]
Length = 288
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 54/120 (45%), Gaps = 3/120 (2%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIA 100
+Q++ +V+FD+ ++I P + + ++ S E + L+ G+ D G+ + +
Sbjct: 165 DQYNVRGVTNVYFDSGKWNISPEGQREICDIASQAEAMDNALLLVVGYTDSDGNEDYNQV 224
Query: 101 LGLRRAYAVFNYFVARG-ISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
L RRA V NY + RM T + P+ + A+NRR V + +A
Sbjct: 225 LSERRAGRVVNYLQQKCGWQPWRMLTPTGMSESDPAADNSTPEGKAQNRRVSVNILVSKA 284
>gi|170727809|ref|YP_001761835.1| flagellar motor protein MotB [Shewanella woodyi ATCC 51908]
gi|169813156|gb|ACA87740.1| OmpA/MotB domain protein [Shewanella woodyi ATCC 51908]
Length = 322
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 55/133 (41%), Gaps = 5/133 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
D + SL +Q + + F + S ++P V+ +G L+ + GH D
Sbjct: 180 VDGAIEIESLGQQIIIRIREKGAFSSGSGFLQPRFKPVVRRVGELLKDVPGIVTVSGHTD 239
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
++ +S+ L +RA AV + + +G RMKV P V A+
Sbjct: 240 DMNISNELYSSNWDLSSKRAVAVAHELIKVKGFDPQRMKVVGMANSDPLVANDTSSHRAR 299
Query: 146 NRRAIVFLKGCRA 158
NRR + ++ +A
Sbjct: 300 NRRVEIAIEQGKA 312
>gi|313674311|ref|YP_004052307.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
gi|312941009|gb|ADR20199.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
Length = 315
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 54/147 (36%), Gaps = 12/147 (8%)
Query: 19 SGIDNLDTKISSP-----DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+ ++ L K+S + L + S+ + + F++ S + ++ L L
Sbjct: 155 AAVNALKQKVSEALLNFKENDLTVEVKNGKVYVSLAEQLLFNSGSTVVDTKGVEALKKLA 214
Query: 74 SWLEKHD-CDFLIEGHAD------ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT 126
L+ + + ++EGH D + L + RA ++ G S R+
Sbjct: 215 QVLKDNQDVNIVVEGHTDDVPISGNNKYLKDNWDLSVLRATSIVRILTNNGASPERVTAA 274
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G+ P + +NRR + L
Sbjct: 275 GKGEFAPKSSNDSAEGRRENRRTEIIL 301
>gi|303236640|ref|ZP_07323221.1| OmpA family protein [Prevotella disiens FB035-09AN]
gi|302483144|gb|EFL46158.1| OmpA family protein [Prevotella disiens FB035-09AN]
Length = 286
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 48/119 (40%), Gaps = 11/119 (9%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADE---------LGSR 95
S+ D++ + + SY I + LS + + + D D LIEG+ D + +
Sbjct: 147 ISLADNMLYKSGSYEISDRAEETLSKIAKIITDYSDYDVLIEGNTDNVPVNAQSERMKNI 206
Query: 96 NSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L RA +V Y R + R+ G+ P E +NRR + +
Sbjct: 207 RNNWDLSCLRASSVVQYLQTRFGVDPKRLTAGGRGEYNPLATNDTELGKQRNRRTQIII 265
>gi|260909380|ref|ZP_05916088.1| OmpA family protein [Prevotella sp. oral taxon 472 str. F0295]
gi|260636472|gb|EEX54454.1| OmpA family protein [Prevotella sp. oral taxon 472 str. F0295]
Length = 280
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 48/114 (42%), Gaps = 6/114 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRN----SSIA 100
S+ D++ + + SY I + LS + ++ D D L+EG+ D + ++
Sbjct: 148 ISLADNMLYKSGSYEINDRAAETLSKIAKIIMDYQDYDVLVEGNTDNVPINRENIRNNWD 207
Query: 101 LGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V Y R ++ R+ G+ P E +NRR + +
Sbjct: 208 LSCLRASSVVQYLQTRYGVNPKRLTAGGRGEFNPVATNGTEVGKQRNRRTQIII 261
>gi|90415361|ref|ZP_01223295.1| flagellar motor protein [marine gamma proteobacterium HTCC2207]
gi|90332684|gb|EAS47854.1| flagellar motor protein [marine gamma proteobacterium HTCC2207]
Length = 399
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 47/121 (38%), Gaps = 6/121 (4%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG-----SRN 96
++ + F + S +++P +L+ +G+ L +EGH D + N
Sbjct: 279 DKIIVRLASQGSFVSGSSNLQPGFTGLLTRVGNSLSVTSGKVRVEGHTDNIPVAFSERFN 338
Query: 97 SSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
S+ L R+ +V ++F + V + P + A+NRR V + G
Sbjct: 339 SNWDLSAARSASVADFFADNSELDQSAITVAGFADTRPIDSNNTAAGRARNRRIEVIVDG 398
Query: 156 C 156
Sbjct: 399 S 399
>gi|312945470|gb|ADR26297.1| outer membrane protein A [Escherichia coli O83:H1 str. NRG 857C]
Length = 365
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F + +++P L L S L + D ++ G+ D +GS + AL
Sbjct: 235 TLKSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQALSE 294
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RRA +V +Y +++GI A ++ G+ P + A +RR + +K
Sbjct: 295 RRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVK 354
Query: 155 GCR 157
G +
Sbjct: 355 GIK 357
>gi|254483240|ref|ZP_05096472.1| OmpA family protein [marine gamma proteobacterium HTCC2148]
gi|214036463|gb|EEB77138.1| OmpA family protein [marine gamma proteobacterium HTCC2148]
Length = 329
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 10/129 (7%)
Query: 34 VLNESSLQEQFSSSVG------DSVFFDTSSYSIRPADIQVLSNLGS---WLEKHDCDFL 84
V+ + +E + ++G S+ F+ S + I+ L G+ E
Sbjct: 197 VVESTEAEEGLNDAIGEVSFDVQSINFEFGSDELAADGIRQLDEFGAALVSPELEQLKLR 256
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAY 143
+ GH D+ G + ++ L RRA AV Y + + R++V G+E P V +A
Sbjct: 257 VAGHTDDQGEESYNLDLSQRRAKAVALYLESNYEVDSGRLEVVGMGEEKPLVPDASLEAR 316
Query: 144 AKNRRAIVF 152
AKNRR +
Sbjct: 317 AKNRRVEMV 325
>gi|147886295|gb|ABQ52380.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Dublin]
Length = 229
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 61/158 (38%), Gaps = 12/158 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + +S + + ++ V F+ + +++P Q L
Sbjct: 64 GLLSVGVSYRFGQQEAAPVVAPAPAPAPEVQTKHFTLKSDVLFNFNKSTLKPEGQQALDQ 123
Query: 72 LGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L S L + D ++ G D +GS + L +RA +V +Y +++GI + ++
Sbjct: 124 LYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRAQSVVDYLISKGIPSDKISARGM 183
Query: 129 GKEMPSVYGHDE---------DAYAKNRRAIVFLKGCR 157
G+ P + D A +RR + +KG +
Sbjct: 184 GESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEVKGVK 221
>gi|119470009|ref|ZP_01612814.1| putative chemotaxis protein [Alteromonadales bacterium TW-7]
gi|119446719|gb|EAW27992.1| putative chemotaxis protein [Alteromonadales bacterium TW-7]
Length = 319
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 51/127 (40%), Gaps = 4/127 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
D N Q+ + + F + S QV+ + + D + G+ D+
Sbjct: 140 DGEANLELNQDWLIIELSSGMLFSSGSAVAHSRAKQVVKIVKDIIAPVDNYIRVRGYTDD 199
Query: 92 ----LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
S+ L + RA ++ A GI+++RM + YG+ P ++ A+NR
Sbjct: 200 ETIKNEIFRSNWELSVARATSILVELEALGINSARMAIEGYGQYSPFAPNDTDEGRAENR 259
Query: 148 RAIVFLK 154
+ ++ L
Sbjct: 260 KVVIALS 266
>gi|332877757|ref|ZP_08445498.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332684337|gb|EGJ57193.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 660
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 61/147 (41%), Gaps = 12/147 (8%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQE-----QFSSSVG-DSVFFDTSSYSIRPADIQVLSNL 72
S D + +P V+ E +E + + ++++FD + +IR + L+ +
Sbjct: 511 SNKDVTAEVLLTPIPVVEEKKPKEIAVGNDLAKILNIENIYFDYNKANIRKDAAEQLAKI 570
Query: 73 GSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
+++H + H D GS ++AL RRA + + + GI +R+ YG+
Sbjct: 571 VKVMQEHPTMTVDVRLHTDSRGSDKYNLALSQRRAKSTIKWITSHGIKKNRITGKGYGET 630
Query: 132 MPSVYGH-----DEDAYAKNRRAIVFL 153
E+ + NRR+ +
Sbjct: 631 QLVNECSNGVPCTEEQHQANRRSEFII 657
>gi|307627623|gb|ADN71927.1| outer membrane protein A [Escherichia coli UM146]
Length = 365
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F + +++P L L S L + D ++ G+ D +GS + AL
Sbjct: 235 TLKSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQALSE 294
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RRA +V +Y +++GI A ++ G+ P + A +RR + +K
Sbjct: 295 RRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVK 354
Query: 155 GCR 157
G +
Sbjct: 355 GIK 357
>gi|220918872|ref|YP_002494176.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
gi|219956726|gb|ACL67110.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 386
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 48/141 (34%), Gaps = 7/141 (4%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVF------FDTSSYSIRPADIQVLSNLG 73
G+ + D + V + + VG + + P+ +L L
Sbjct: 242 GVADPDDRCPEQAGVAADGCPRAYRLLEVGRDRIALREPVRFGARDDLLPSSAVLLDELA 301
Query: 74 SWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
L +E H D G +S L RA AV RGI A R++ +G E
Sbjct: 302 QALRDRPRLRVAVEVHTDGAGEAAASKRLSQARAEAVRAALAGRGIEAERVEAKGFGAEH 361
Query: 133 PSVYGHDEDAYAKNRRAIVFL 153
P A+NRR + +
Sbjct: 362 PIASNKTARGRAQNRRTEIRI 382
>gi|117623167|ref|YP_852080.1| outer membrane protein A [Escherichia coli APEC O1]
gi|115512291|gb|ABJ00366.1| OmpA [Escherichia coli APEC O1]
Length = 370
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F + +++P L L S L + D ++ G+ D +GS + AL
Sbjct: 240 TLKSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQALSE 299
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RRA +V +Y +++GI A ++ G+ P + A +RR + +K
Sbjct: 300 RRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVK 359
Query: 155 GCR 157
G +
Sbjct: 360 GIK 362
>gi|332290809|ref|YP_004429418.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332168895|gb|AEE18150.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 674
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 55/128 (42%), Gaps = 7/128 (5%)
Query: 35 LNESSLQEQFSSSVGDS--VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADE 91
+N + E+ D ++FD + +R VL L + + I H D
Sbjct: 546 VNAPQVVEKEGKLFMDVAPIYFDFDLHVVREDSQAVLDRLAAKLTKYKRIKIKISSHTDS 605
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH----DEDAYAKNR 147
G ++ L +RA + F+Y V++GI ASR++ YG P + ED + NR
Sbjct: 606 RGPAAYNMPLSEKRAKSTFDYLVSKGIDASRIQYQGYGDTKPVINCPVGKCTEDDHQLNR 665
Query: 148 RAIVFLKG 155
R+ + G
Sbjct: 666 RSEFEITG 673
>gi|327399144|ref|YP_004340013.1| peptidoglycan-associated lipoprotein [Hippea maritima DSM 10411]
gi|327181773|gb|AEA33954.1| peptidoglycan-associated lipoprotein [Hippea maritima DSM 10411]
Length = 188
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Query: 57 SSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA 115
+ Y I +L + +++ + IEG+ DE G+ ++ALG +RA A Y VA
Sbjct: 88 NQYGINEKPKAILDRIAAFMLKHPTLKVRIEGNCDERGTVEYNLALGQKRALAAKKYLVA 147
Query: 116 RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
+G++ R+ + SYG+ P H+E A+AKNRR
Sbjct: 148 KGVNPDRIDIISYGESRPLDPAHNEYAWAKNRR 180
>gi|158536385|gb|ABW72717.1| outer membrane protein A [Escherichia coli]
gi|158536387|gb|ABW72718.1| outer membrane protein A [Escherichia coli]
gi|158536389|gb|ABW72719.1| outer membrane protein A [Escherichia coli]
gi|158536393|gb|ABW72721.1| outer membrane protein A [Escherichia coli]
gi|158536399|gb|ABW72724.1| outer membrane protein A [Escherichia coli]
gi|158536401|gb|ABW72725.1| outer membrane protein A [Escherichia coli]
Length = 358
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 60/158 (37%), Gaps = 12/158 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + +S + + ++ V F+ + +++P L
Sbjct: 193 GMLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLKSDVLFNFNKATLKPEGQAALDQ 252
Query: 72 LGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L S L + D ++ G+ D +GS + L RRA +V +Y +++GI A ++
Sbjct: 253 LYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRAQSVVDYLISKGIPADKISARGM 312
Query: 129 GKEMPS--VYGHDEDAYAK-------NRRAIVFLKGCR 157
G+ P + A +RR + +KG +
Sbjct: 313 GESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKGIK 350
>gi|126664143|ref|ZP_01735136.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Flavobacteria bacterium BAL38]
gi|126623857|gb|EAZ94552.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Flavobacteria bacterium BAL38]
Length = 621
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 56/137 (40%), Gaps = 3/137 (2%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ + + +LN + ++F+ +I L+ L + ++
Sbjct: 482 EVAKAENDQVVVEALLNPIMPIITEKEVILQPIYFEYDKSNITADGAAELNKLIIVMNEN 541
Query: 80 DCDFLI-EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ + H D GS ++ L RRA A Y +++GI+ R+ +G+ P V
Sbjct: 542 PNMIIFAKSHTDSRGSDKYNMKLSDRRAKATVQYLLSKGIAKERISGQGFGESEPKVACK 601
Query: 139 --DEDAYAKNRRAIVFL 153
E+ +A+NRR+ +
Sbjct: 602 SCTEEEHAQNRRSEFLI 618
>gi|114799403|ref|YP_759662.1| OmpA family protein [Hyphomonas neptunium ATCC 15444]
gi|114739577|gb|ABI77702.1| ompA family protein [Hyphomonas neptunium ATCC 15444]
Length = 282
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 58/149 (38%), Gaps = 1/149 (0%)
Query: 7 FIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADI 66
II+ I++ + + ES +S + F + +I P +
Sbjct: 132 LIIVDGISIEGGEEGIGVPLANLTGQLTTIESCQAAFDVTSKDRVIQFGAGNANISPVSL 191
Query: 67 QVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
++ LG + I H D G+ + + + RA A+ Y + + ++ +
Sbjct: 192 PLIDALGGIAALCRAFEIEIGAHTDTRGADDYNQRVSQERADAIRAYLLGKELAEETLTA 251
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
YG+ P G +A+A+NRR + +K
Sbjct: 252 VGYGETQPIDTGSTAEAHARNRRTVFTVK 280
>gi|87118951|ref|ZP_01074849.1| peptidoglycan-associated lipoprotein OprL [Marinomonas sp. MED121]
gi|86165342|gb|EAQ66609.1| peptidoglycan-associated lipoprotein OprL [Marinomonas sp. MED121]
Length = 208
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 1/127 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFL 84
+ ++ + V +FD +RP + L+ + + D +
Sbjct: 79 VSAENATAAQKAAANAKDMLVGVAHIFYFDFDKSIVRPEAREALAKHAKFLVANPDARVV 138
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+EGHADE G+R ++ALG RRA AV Y +G++A++++ S+G+E P +GHD+ A+
Sbjct: 139 LEGHADERGTREYNMALGERRAKAVSRYLTIQGVAAAQIESVSFGEEKPLEFGHDKAAWQ 198
Query: 145 KNRRAIV 151
NRR V
Sbjct: 199 ANRRVEV 205
>gi|332342400|gb|AEE55734.1| outer membrane protein OmpA [Escherichia coli UMNK88]
Length = 350
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P L L S L + D ++ G+ D +GS + L
Sbjct: 220 TLKSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSE 279
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RRA +V +Y +++GI A ++ G+ P + A +RR + +K
Sbjct: 280 RRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVK 339
Query: 155 GCR 157
G +
Sbjct: 340 GIK 342
>gi|323462898|pdb|3NB3|A Chain A, The Host Outer Membrane Proteins Ompa And Ompc Are Packed
At Specific Sites In The Shigella Phage Sf6 Virion As
Structural Components
gi|323462899|pdb|3NB3|B Chain B, The Host Outer Membrane Proteins Ompa And Ompc Are Packed
At Specific Sites In The Shigella Phage Sf6 Virion As
Structural Components
gi|323462900|pdb|3NB3|C Chain C, The Host Outer Membrane Proteins Ompa And Ompc Are Packed
At Specific Sites In The Shigella Phage Sf6 Virion As
Structural Components
Length = 346
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P L L S L + D ++ G+ D +GS + L
Sbjct: 216 TLKSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSE 275
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RRA +V +Y +++GI A ++ G+ P + A +RR + +K
Sbjct: 276 RRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVK 335
Query: 155 GCR 157
G +
Sbjct: 336 GIK 338
>gi|320192555|gb|EFW67196.1| Outer membrane protein A precursor [Escherichia coli O157:H7 str.
EC1212]
gi|320202354|gb|EFW76925.1| Outer membrane protein A precursor [Escherichia coli EC4100B]
gi|323165436|gb|EFZ51223.1| outer membrane protein A [Shigella sonnei 53G]
Length = 337
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P L L S L + D ++ G+ D +GS + L
Sbjct: 207 TLKSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSE 266
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RRA +V +Y +++GI A ++ G+ P + A +RR + +K
Sbjct: 267 RRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVK 326
Query: 155 GCR 157
G +
Sbjct: 327 GIK 329
>gi|309701236|emb|CBJ00536.1| outer membrane protein A [Escherichia coli ETEC H10407]
Length = 346
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P L L S L + D ++ G+ D +GS + L
Sbjct: 216 TLKSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSE 275
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RRA +V +Y +++GI A ++ G+ P + A +RR + +K
Sbjct: 276 RRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVK 335
Query: 155 GCR 157
G +
Sbjct: 336 GIK 338
>gi|281600319|gb|ADA73303.1| Outer membrane protein A [Shigella flexneri 2002017]
Length = 356
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P L L S L + D ++ G+ D +GS + L
Sbjct: 226 TLKSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSE 285
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RRA +V +Y +++GI A ++ G+ P + A +RR + +K
Sbjct: 286 RRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVK 345
Query: 155 GCR 157
G +
Sbjct: 346 GIK 348
>gi|110804972|ref|YP_688492.1| outer membrane protein A [Shigella flexneri 5 str. 8401]
gi|110614520|gb|ABF03187.1| outer membrane protein 3a [Shigella flexneri 5 str. 8401]
Length = 348
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P L L S L + D ++ G+ D +GS + L
Sbjct: 218 TLKSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSE 277
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RRA +V +Y +++GI A ++ G+ P + A +RR + +K
Sbjct: 278 RRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKRRAALIDCLAPDRRVEIEVK 337
Query: 155 GCR 157
G +
Sbjct: 338 GIK 340
>gi|38000008|gb|AAP74760.2| outer membrane protein A precursor [Shigella flexneri 2a]
Length = 327
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P L L S L + D ++ G+ D +GS + L
Sbjct: 197 TLKSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSE 256
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RRA +V +Y +++GI A ++ G+ P + A +RR + +K
Sbjct: 257 RRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVK 316
Query: 155 GCR 157
G +
Sbjct: 317 GIK 319
>gi|30062494|ref|NP_836665.1| outer membrane protein A [Shigella flexneri 2a str. 2457T]
gi|56479781|ref|NP_706879.2| outer membrane protein A [Shigella flexneri 2a str. 301]
gi|82544719|ref|YP_408666.1| outer membrane protein A [Shigella boydii Sb227]
gi|30040740|gb|AAP16471.1| outer membrane protein 3a (II*;G;d) [Shigella flexneri 2a str.
2457T]
gi|56383332|gb|AAN42586.2| outer membrane protein 3a (II*;G;d) [Shigella flexneri 2a str. 301]
gi|81246130|gb|ABB66838.1| outer membrane protein 3a [Shigella boydii Sb227]
gi|313650796|gb|EFS15197.1| outer membrane protein A [Shigella flexneri 2a str. 2457T]
gi|332759051|gb|EGJ89361.1| outer membrane protein A [Shigella flexneri 4343-70]
gi|332759932|gb|EGJ90233.1| outer membrane protein A [Shigella flexneri 2747-71]
gi|332762738|gb|EGJ93001.1| outer membrane protein A [Shigella flexneri K-671]
gi|332767750|gb|EGJ97941.1| outer membrane protein 3a [Shigella flexneri 2930-71]
gi|333001202|gb|EGK20770.1| outer membrane protein A [Shigella flexneri VA-6]
gi|333006193|gb|EGK25702.1| outer membrane protein A [Shigella flexneri K-218]
gi|333008941|gb|EGK28401.1| outer membrane protein A [Shigella flexneri K-272]
gi|333020097|gb|EGK39368.1| outer membrane protein A [Shigella flexneri K-304]
gi|333020253|gb|EGK39523.1| outer membrane protein A [Shigella flexneri K-227]
Length = 348
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P L L S L + D ++ G+ D +GS + L
Sbjct: 218 TLKSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSE 277
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RRA +V +Y +++GI A ++ G+ P + A +RR + +K
Sbjct: 278 RRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVK 337
Query: 155 GCR 157
G +
Sbjct: 338 GIK 340
>gi|332286925|ref|YP_004418836.1| peptidoglycan-associated lipoprotein [Pusillimonas sp. T7-7]
gi|330430878|gb|AEC22212.1| peptidoglycan-associated lipoprotein [Pusillimonas sp. T7-7]
Length = 165
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAY 107
SV+FD SY++ ++ S+L H + LIEG+AD G ++ALG RR+
Sbjct: 58 QRSVYFDFDSYTVPDQYRSLVEMHASYLASHAQQNILIEGNADARGGSEYNLALGQRRSE 117
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
AV G++A +++ S+GKE P G+ E YA+NRRA +
Sbjct: 118 AVARMMTLLGVNAGQIEAISFGKERPKATGNTEADYAENRRADIV 162
>gi|157960752|ref|YP_001500786.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC
700345]
gi|157845752|gb|ABV86251.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345]
Length = 356
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 59/140 (42%), Gaps = 1/140 (0%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+ + + K + + + + ++ + FD S + + + + +
Sbjct: 212 ASVSQVKEKPITLPEKVIPVTAKPVVFPALTVTSLFDFDSSELTN-SDSLTAVIERLNQV 270
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
I+G+ D G+ + AL RRA AV + +A GI +++V +G++ P +
Sbjct: 271 PTAIANIKGYTDSTGAAAYNQALSERRAQAVADDLIAAGIKPEQIEVHGFGEQFPVMKND 330
Query: 139 DEDAYAKNRRAIVFLKGCRA 158
+ +NRR ++ ++ +
Sbjct: 331 TSEHRHENRRVLIHIQSTTS 350
>gi|51235578|gb|AAT98590.1| outer membrane protein A [Escherichia coli]
Length = 346
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P L L S L + D ++ G+ D +GS + L
Sbjct: 216 TLKSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSE 275
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RRA +V +Y +++GI A ++ G+ P + A +RR + +K
Sbjct: 276 RRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVK 335
Query: 155 GCR 157
G +
Sbjct: 336 GIK 338
>gi|331651979|ref|ZP_08352998.1| outer membrane protein A (Outer membrane protein II) [Escherichia
coli M718]
gi|331050257|gb|EGI22315.1| outer membrane protein A (Outer membrane protein II) [Escherichia
coli M718]
Length = 375
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 60/158 (37%), Gaps = 12/158 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + +S + + ++ V F+ + +++P L
Sbjct: 210 GLLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLKSDVLFNFNKATLKPEGQAALDQ 269
Query: 72 LGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L S L + D ++ G+ D +GS + L RRA +V +Y +++GI A ++
Sbjct: 270 LYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRAQSVVDYLISKGIPADKISARGM 329
Query: 129 GKEMPS--VYGHDEDAYAK-------NRRAIVFLKGCR 157
G+ P + A +RR + +KG +
Sbjct: 330 GESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKGIK 367
>gi|323700000|ref|ZP_08111912.1| OmpA/MotB domain protein [Desulfovibrio sp. ND132]
gi|323459932|gb|EGB15797.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans ND132]
Length = 192
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 59/139 (42%), Gaps = 1/139 (0%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+++G + T + +++ Q + + F + S + +L ++
Sbjct: 54 AVTGTTRVTTLSEAEVQSEFGAAMAAQPLPTARFILHFHSDSTRLTDESKALLPDILESW 113
Query: 77 EKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+ GH D LG + + L +RRA V + V G+ +++TS+G+E P +
Sbjct: 114 RSRSSRDVSVVGHTDTLGEKQYNYDLSVRRAEKVRDLLVKGGMPEDIIEMTSHGEENPLI 173
Query: 136 YGHDEDAYAKNRRAIVFLK 154
D + +NRR V ++
Sbjct: 174 PTPDGRSEPRNRRVEVLVR 192
>gi|300902879|ref|ZP_07120825.1| outer membrane protein A [Escherichia coli MS 84-1]
gi|301302427|ref|ZP_07208558.1| outer membrane protein A [Escherichia coli MS 124-1]
gi|300405092|gb|EFJ88630.1| outer membrane protein A [Escherichia coli MS 84-1]
gi|300842266|gb|EFK70026.1| outer membrane protein A [Escherichia coli MS 124-1]
gi|315258005|gb|EFU37973.1| outer membrane protein A [Escherichia coli MS 85-1]
Length = 358
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 60/158 (37%), Gaps = 12/158 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + +S + + ++ V F+ + +++P L
Sbjct: 193 GMLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLKSDVLFNFNKATLKPEGQAALDQ 252
Query: 72 LGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L S L + D ++ G+ D +GS + L RRA +V +Y +++GI A ++
Sbjct: 253 LYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRAQSVVDYLISKGIPADKISARGM 312
Query: 129 GKEMPS--VYGHDEDAYAK-------NRRAIVFLKGCR 157
G+ P + A +RR + +KG +
Sbjct: 313 GESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKGIK 350
>gi|325923841|ref|ZP_08185450.1| flagellar motor protein [Xanthomonas gardneri ATCC 19865]
gi|325545675|gb|EGD16920.1| flagellar motor protein [Xanthomonas gardneri ATCC 19865]
Length = 329
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 44/121 (36%), Gaps = 4/121 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ + F T S ++ LS L S L +EG+ D S+
Sbjct: 163 IEVEINSDILFGTGSAALAGTARDTLSTLASVLRDAPNGVRVEGYTDNQPIATAQFPSNW 222
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
L RA +V + F G++ R+ + YG+ E NRR ++ + A
Sbjct: 223 ELSAARAASVVHLFADDGVAPQRLAMVGYGEFRARADNSTEAGRNANRRVVLIILADSAG 282
Query: 160 T 160
+
Sbjct: 283 S 283
>gi|301166059|emb|CBW25633.1| peptidoglycan-associated lipoprotein precursor [Bacteriovorax
marinus SJ]
Length = 169
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/133 (29%), Positives = 70/133 (52%), Gaps = 2/133 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD- 80
+++ + + + + + +VFF +S + + + L+ +L+ +
Sbjct: 35 QTMESVGADASALELNADSDSGKAGPIK-TVFFGFNSSVLSTSARETLNANAEFLKANPS 93
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ +EGH DE G ++ALG RRA AV ++ VA G+++SR+ S+GKE P +GHDE
Sbjct: 94 VEIQVEGHCDERGGVQYNLALGERRAVAVKDHLVAMGVNSSRISTISFGKERPVAFGHDE 153
Query: 141 DAYAKNRRAIVFL 153
A+A NRR +
Sbjct: 154 SAWASNRRGNFII 166
>gi|262384794|ref|ZP_06077926.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|262293510|gb|EEY81446.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
Length = 277
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 49/127 (38%), Gaps = 6/127 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
L + + ++ D + F + S + + L+ L +++D D IEGH D
Sbjct: 138 SDELTVTEKNGKVYVAMSDKLLFQSGSAKVDKRGKEALAKLAEVLNKQNDIDVYIEGHTD 197
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ L + RA +V G++ +++ G+ MP D +K
Sbjct: 198 SKPINTAQFKDNWDLSVIRATSVVRILTKDYGVNPLQIQPCGRGEFMPVADNETADGRSK 257
Query: 146 NRRAIVF 152
NRR +
Sbjct: 258 NRRTEII 264
>gi|156976391|ref|YP_001447297.1| hypothetical protein VIBHAR_05164 [Vibrio harveyi ATCC BAA-1116]
gi|156527985|gb|ABU73070.1| hypothetical protein VIBHAR_05164 [Vibrio harveyi ATCC BAA-1116]
Length = 301
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 54/158 (34%), Gaps = 9/158 (5%)
Query: 1 MQYSTIFII-LSAITMMSISGIDN-------LDTKISSPDTVLNESSLQEQFSSSVGDSV 52
M+ + + + A M++ D + L L Q +
Sbjct: 1 MKTTIRLLSGMIAGAMLAGCSADAYVSQENREKFADVNVSKFLISECLAPQREIHFAVAE 60
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FD IR AD L ++ I GH D GS + L +RRA +V Y
Sbjct: 61 HFDFDKSFIREADAVSLDVFIRNIQGLSGRITIVGHTDFKGSDEYNDKLSMRRAESVEAY 120
Query: 113 FVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
+ +V +G+ P G + A+NRRA
Sbjct: 121 LQQQLDPEQYDWEVKHFGESQPLALGKSDQDRAENRRA 158
Score = 59.4 bits (142), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FD ++P D+ L + + L+ + ++ GH D++GS + + L RRA V Y
Sbjct: 190 HFDFDKSELKPEDLSQLDDFIAKLQGLEGSIMVAGHTDQVGSLSYNEQLAERRAQTVVAY 249
Query: 113 FVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ + +V ++G+ P + +A A NRRA + K
Sbjct: 250 LKTKLDPSQFVWEVKAFGELQPVINEESPEANALNRRAFIVFK 292
>gi|149198155|ref|ZP_01875202.1| OmpA/MotB [Lentisphaera araneosa HTCC2155]
gi|149138757|gb|EDM27163.1| OmpA/MotB [Lentisphaera araneosa HTCC2155]
Length = 199
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/194 (20%), Positives = 73/194 (37%), Gaps = 41/194 (21%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQF---------------- 44
M++ T+ I + ++ + + S + N + QE
Sbjct: 1 MKFKTLQICTFLAVISLMTACQSTEDGTSGSGDLANSPNTQEADPSSKVFSPEDQSPELN 60
Query: 45 -SSSVGD-----------------------SVFFDTSSYSIRPADIQVLSNLGSWLEKH- 79
S+S+ D V+F +S SI ++++ L L ++ +
Sbjct: 61 PSTSISDGLFSKGGKNPFDLDGEKIHHNFSPVYFGFNSASIDKSNLRPLKILAKYIADNK 120
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
D +I GH DE GS + L +RA AV ++ +++ G+E P+ G
Sbjct: 121 DFHLVISGHTDEKGSEQYNRILSEKRALAVREKLISFYDIKNKIHTIGMGEEQPASLGDS 180
Query: 140 EDAYAKNRRAIVFL 153
+AKNRRA +
Sbjct: 181 IKDHAKNRRAQFEI 194
>gi|78777214|ref|YP_393529.1| OmpA/MotB [Sulfurimonas denitrificans DSM 1251]
gi|78497754|gb|ABB44294.1| OmpA/MotB [Sulfurimonas denitrificans DSM 1251]
Length = 240
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 49/148 (33%), Gaps = 8/148 (5%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + ++ I V++ Q+ F + S+ F S I+ D +
Sbjct: 69 SAALKEMNEIQEAQASTQGSAAVVSLEEAQDGFVIELPASLLFKPGSAVIQNEDSLLFLK 128
Query: 72 ---LGSWLEKHDCDFLIEGHADELGS-----RNSSIALGLRRAYAVFNYFVARGISASRM 123
L ++ + GH D+ G + L RA +V + G+ R+
Sbjct: 129 RVALIIGELPNETTLSVCGHTDDQGPSVKGPYKDNWELSSARAISVLQELLLDGVDPKRI 188
Query: 124 KVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
Y + P E +NRR +
Sbjct: 189 SAAGYAEFSPKATNATESGREQNRRVEL 216
>gi|15800816|ref|NP_286832.1| outer membrane protein A [Escherichia coli O157:H7 EDL933]
gi|15830295|ref|NP_309068.1| outer membrane protein A [Escherichia coli O157:H7 str. Sakai]
gi|16128924|ref|NP_415477.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K-12
substr. MG1655]
gi|74311514|ref|YP_309933.1| outer membrane protein A [Shigella sonnei Ss046]
gi|89107807|ref|AP_001587.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K-12
substr. W3110]
gi|157160478|ref|YP_001457796.1| outer membrane protein A [Escherichia coli HS]
gi|170080615|ref|YP_001729935.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K-12
substr. DH10B]
gi|187730326|ref|YP_001880845.1| outer membrane protein A [Shigella boydii CDC 3083-94]
gi|188493530|ref|ZP_03000800.1| outer membrane protein P5 [Escherichia coli 53638]
gi|209918209|ref|YP_002292293.1| outer membrane protein A [Escherichia coli SE11]
gi|218694432|ref|YP_002402099.1| outer membrane protein A [Escherichia coli 55989]
gi|238900215|ref|YP_002926011.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli BW2952]
gi|253774014|ref|YP_003036845.1| outer membrane protein A [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254161071|ref|YP_003044179.1| outer membrane protein A [Escherichia coli B str. REL606]
gi|254792157|ref|YP_003076994.1| outer membrane protein A [Escherichia coli O157:H7 str. TW14359]
gi|260843206|ref|YP_003220984.1| outer membrane protein A [Escherichia coli O103:H2 str. 12009]
gi|260854249|ref|YP_003228140.1| outer membrane protein A [Escherichia coli O26:H11 str. 11368]
gi|260867129|ref|YP_003233531.1| outer membrane protein A [Escherichia coli O111:H- str. 11128]
gi|261227460|ref|ZP_05941741.1| outer membrane protein A [Escherichia coli O157:H7 str. FRIK2000]
gi|261256117|ref|ZP_05948650.1| outer membrane protein A [Escherichia coli O157:H7 str. FRIK966]
gi|307311656|ref|ZP_07591296.1| OmpA domain protein transmembrane region-containing protein
[Escherichia coli W]
gi|312971089|ref|ZP_07785268.1| outer membrane protein A [Escherichia coli 1827-70]
gi|71159604|sp|P0A911|OMPA_ECO57 RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II*; Flags: Precursor
gi|71159605|sp|P0A910|OMPA_ECOLI RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II*; Flags: Precursor
gi|12514142|gb|AAG55443.1|AE005286_2 outer membrane protein 3a (II*;G;d) [Escherichia coli O157:H7 str.
EDL933]
gi|42161|emb|CAA23588.1| ompA protein [Escherichia coli]
gi|1651465|dbj|BAA35715.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K12
substr. W3110]
gi|1787191|gb|AAC74043.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K-12
substr. MG1655]
gi|13360501|dbj|BAB34464.1| outer membrane protein 3a [Escherichia coli O157:H7 str. Sakai]
gi|32329155|gb|AAP74759.1| outer membrane protein A precursor [Shigella sonnei]
gi|73854991|gb|AAZ87698.1| outer membrane protein 3a (II*;G;d) [Shigella sonnei Ss046]
gi|157066158|gb|ABV05413.1| outer membrane protein A [Escherichia coli HS]
gi|169888450|gb|ACB02157.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli str. K-12
substr. DH10B]
gi|187427318|gb|ACD06592.1| outer membrane protein A [Shigella boydii CDC 3083-94]
gi|188488729|gb|EDU63832.1| outer membrane protein P5 [Escherichia coli 53638]
gi|209774438|gb|ACI85531.1| outer membrane protein 3a [Escherichia coli]
gi|209774440|gb|ACI85532.1| outer membrane protein 3a [Escherichia coli]
gi|209774442|gb|ACI85533.1| outer membrane protein 3a [Escherichia coli]
gi|209774444|gb|ACI85534.1| outer membrane protein 3a [Escherichia coli]
gi|209774446|gb|ACI85535.1| outer membrane protein 3a [Escherichia coli]
gi|209911468|dbj|BAG76542.1| outer membrane protein OmpA [Escherichia coli SE11]
gi|218351164|emb|CAU96868.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli 55989]
gi|238861958|gb|ACR63956.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli BW2952]
gi|242376772|emb|CAQ31485.1| outer membrane protein 3a (II*;G;d) [Escherichia coli BL21(DE3)]
gi|253325058|gb|ACT29660.1| OmpA domain protein transmembrane region-containing protein
[Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253972972|gb|ACT38643.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli B str.
REL606]
gi|253977186|gb|ACT42856.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli BL21(DE3)]
gi|254591557|gb|ACT70918.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli O157:H7
str. TW14359]
gi|257752898|dbj|BAI24400.1| outer membrane protein A [Escherichia coli O26:H11 str. 11368]
gi|257758353|dbj|BAI29850.1| outer membrane protein A [Escherichia coli O103:H2 str. 12009]
gi|257763485|dbj|BAI34980.1| outer membrane protein A [Escherichia coli O111:H- str. 11128]
gi|260449897|gb|ACX40319.1| OmpA domain protein transmembrane region-containing protein
[Escherichia coli DH1]
gi|306908211|gb|EFN38710.1| OmpA domain protein transmembrane region-containing protein
[Escherichia coli W]
gi|310336850|gb|EFQ02017.1| outer membrane protein A [Escherichia coli 1827-70]
gi|315060242|gb|ADT74569.1| outer membrane protein A [Escherichia coli W]
gi|315135605|dbj|BAJ42764.1| OmpA domain protein transmembrane region-containing protein
precursor [Escherichia coli DH1]
gi|320648407|gb|EFX17062.1| outer membrane protein A [Escherichia coli O157:H- str. H 2687]
gi|320659566|gb|EFX27129.1| outer membrane protein A [Escherichia coli O55:H7 str. USDA 5905]
gi|320664337|gb|EFX31488.1| outer membrane protein A [Escherichia coli O157:H7 str. LSU-61]
gi|323157149|gb|EFZ43272.1| outer membrane protein A [Escherichia coli EPECa14]
gi|323159587|gb|EFZ45567.1| outer membrane protein A [Escherichia coli E128010]
gi|323174936|gb|EFZ60551.1| outer membrane protein A [Escherichia coli LT-68]
gi|323175416|gb|EFZ61011.1| outer membrane protein A [Escherichia coli 1180]
gi|323185333|gb|EFZ70697.1| outer membrane protein A [Escherichia coli 1357]
gi|323379198|gb|ADX51466.1| OmpA/MotB domain protein [Escherichia coli KO11]
gi|323938062|gb|EGB34324.1| OmpA transmembrane domain-containing protein [Escherichia coli
E1520]
gi|323942872|gb|EGB39037.1| OmpA transmembrane domain-containing protein [Escherichia coli
E482]
gi|323947254|gb|EGB43262.1| OmpA transmembrane domain-containing protein [Escherichia coli
H120]
gi|323962843|gb|EGB58418.1| OmpA transmembrane domain-containing protein [Escherichia coli
H489]
gi|323973167|gb|EGB68359.1| OmpA transmembrane domain-containing protein [Escherichia coli
TA007]
gi|324117179|gb|EGC11087.1| OmpA transmembrane domain-containing protein [Escherichia coli
E1167]
Length = 346
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P L L S L + D ++ G+ D +GS + L
Sbjct: 216 TLKSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSE 275
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RRA +V +Y +++GI A ++ G+ P + A +RR + +K
Sbjct: 276 RRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVK 335
Query: 155 GCR 157
G +
Sbjct: 336 GIK 338
>gi|289667244|ref|ZP_06488319.1| flagellar motor protein MotD [Xanthomonas campestris pv. musacearum
NCPPB4381]
Length = 324
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 44/121 (36%), Gaps = 4/121 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ + F T S ++ LS L S L +EG+ D S+
Sbjct: 158 IEVEINSDILFGTGSAALASNARTTLSTLASVLRDAPNGVRVEGYTDNQPIATAQFPSNW 217
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
L RA +V + F G++ R+ + YG+ E NRR ++ + A
Sbjct: 218 ELSAARAASVVHLFADDGVAPQRLAMVGYGEFRARADNSTEAGRNANRRVVLIILADSAG 277
Query: 160 T 160
+
Sbjct: 278 S 278
>gi|194443139|ref|YP_002039516.1| hypothetical protein SNSL254_A0308 [Salmonella enterica subsp.
enterica serovar Newport str. SL254]
gi|194401802|gb|ACF62024.1| SciP protein [Salmonella enterica subsp. enterica serovar Newport
str. SL254]
Length = 434
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 40/123 (32%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
L + F ++ A V++ + + I GH D
Sbjct: 310 LTVDEDDQHSRVVFRGDAMFVPGQKTVSDAIRPVINKAAREIARVGGAVTITGHTDSQPI 369
Query: 95 RNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
++ L +RA V + G+ A R+ + G +P + AKNRR
Sbjct: 370 HSAEFPSNLVLSEKRAAEVAALLTSGGVPAGRVHIVGKGDTVPVADNGSKAGRAKNRRVE 429
Query: 151 VFL 153
+ +
Sbjct: 430 ILV 432
>gi|115375674|ref|ZP_01462929.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1]
gi|310821151|ref|YP_003953509.1| OmpA-like Outer membrane domain-containing protein [Stigmatella
aurantiaca DW4/3-1]
gi|115367322|gb|EAU66302.1| OmpA domain protein [Stigmatella aurantiaca DW4/3-1]
gi|309394223|gb|ADO71682.1| OmpA-like Outer membrane domain protein [Stigmatella aurantiaca
DW4/3-1]
Length = 380
Score = 68.7 bits (166), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
+ + ++F + ++ A VL + + + D IEGH+D G+ +++ L +RA
Sbjct: 263 LKEKLYFAWNQSTLEEASFPVLDEAVQALKDNPDFRVQIEGHSDSSGADDNNQTLSEKRA 322
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V +Y VA GI+ R+ + +P + NRR +
Sbjct: 323 KTVLDYLVAHGIAKERLVSKGFSSSVPLDTNNTVAGRENNRRVEFVV 369
>gi|87118960|ref|ZP_01074858.1| OmpF [Marinomonas sp. MED121]
gi|86165351|gb|EAQ66618.1| OmpF [Marinomonas sp. MED121]
Length = 192
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 53/135 (39%), Gaps = 2/135 (1%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
+ ++ Q V V F T+ + + +++ L LG +L+KH
Sbjct: 31 TNTPLGSKVDNAGCPVTKNINTQTEYKVELDVRFHTNKFELEDNELKGLLKLGKFLQKHQ 90
Query: 81 CD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGH 138
IEGH D +G ++ L RA A+ V + IS+ R+ +G+ P
Sbjct: 91 SSDVFIEGHTDSMGDDEDNLRLSQNRANAIKQALVTKFLISSDRIIAIGHGENQPIANNE 150
Query: 139 DEDAYAKNRRAIVFL 153
E A NRR +
Sbjct: 151 TEYGRAVNRRVTAEV 165
>gi|21231338|ref|NP_637255.1| flagellar motor protein MotD [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66768610|ref|YP_243372.1| flagellar motor protein MotD [Xanthomonas campestris pv. campestris
str. 8004]
gi|21112997|gb|AAM41179.1| MotB protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|66573942|gb|AAY49352.1| MotB protein [Xanthomonas campestris pv. campestris str. 8004]
Length = 324
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 44/121 (36%), Gaps = 4/121 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ + F T S + + LS L + L +EG+ D S+
Sbjct: 158 IEVEINSDILFVTGSALLAGSARGTLSTLAAVLRDAPNGVRVEGYTDNQPIATAQFPSNW 217
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
L RA +V + F G++ R+ + YG+ E NRR ++ + A
Sbjct: 218 ELSAARAASVVHLFADEGVAPQRLAMVGYGEFRARADNSTEAGRNANRRVVLIILADSAG 277
Query: 160 T 160
+
Sbjct: 278 S 278
>gi|84624345|ref|YP_451717.1| flagellar motor protein MotD [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|84368285|dbj|BAE69443.1| MotB protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 324
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 45/121 (37%), Gaps = 4/121 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ + F T S ++ LS L S L + +EG+ D S+
Sbjct: 158 IEVEINSDILFGTGSAALAGNARTTLSTLASVLREAPNGVRVEGYTDNQPIATAQFPSNW 217
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
L RA +V + F G++ R+ + YG+ E NRR ++ + A
Sbjct: 218 ELSAARAASVVHLFADDGVAPQRLAMVGYGEFRARADNSTEAGRNANRRVVLIILADSAG 277
Query: 160 T 160
+
Sbjct: 278 S 278
>gi|83312092|ref|YP_422356.1| Outer membrane protein and related peptidoglycan-associated lipo
protein [Magnetospirillum magneticum AMB-1]
gi|82946933|dbj|BAE51797.1| Outer membrane protein and related peptidoglycan-associated lipo
protein [Magnetospirillum magneticum AMB-1]
Length = 167
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+ F + Q+L ++ + +IEGHAD+ G+R ++A+G RRA V
Sbjct: 61 ILFAAGRLDLDAKARQILDDVAGILAREASIPVIIEGHADDTGTREYNLAIGERRAETVR 120
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
Y + RG+ R++ S+GKE P G + A A NRR +V L+
Sbjct: 121 QYLIGRGVDGERIRAISFGKERPRAPGRTKAARAANRRVVVRLE 164
>gi|332881152|ref|ZP_08448812.1| V-type H(+)-translocating pyrophosphatase [Capnocytophaga sp. oral
taxon 329 str. F0087]
gi|332680901|gb|EGJ53838.1| V-type H(+)-translocating pyrophosphatase [Capnocytophaga sp. oral
taxon 329 str. F0087]
Length = 920
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
Query: 50 DSVFFDTSSYSIRPADIQVL-SNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
D +F T + + Q L + + + G+ D GS ++ L RRA +
Sbjct: 812 DRTYFKTGNDELTEGSEQQLKNIVAILKAYPKAAIRLGGYTDNTGSAEGNLKLSERRANS 871
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVY-GHDEDAYAKNRRAIVFL 153
V N VA G + +++ YG E P ++ AKNRR V L
Sbjct: 872 VLNKLVALGANKAQLSAQGYGAEHPICPANDTDECKAKNRRIDVRL 917
>gi|299145102|ref|ZP_07038170.1| putative flagellar motor protein MotB [Bacteroides sp. 3_1_23]
gi|298515593|gb|EFI39474.1| putative flagellar motor protein MotB [Bacteroides sp. 3_1_23]
Length = 280
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 46/127 (36%), Gaps = 6/127 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
L + ++ D + F + S + + L L ++ D D IEGH D
Sbjct: 135 TDELTVREKDGKVYVAMSDKLLFQSGSARLDKRGEEALGKLAEVLNKQTDIDVFIEGHTD 194
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ L + RA +V + + +++ + G+ MP + +K
Sbjct: 195 NKPINTVQFKDNWDLSVIRATSVVRILIKNYNVNPLQIQPSGRGEYMPVDDNKTAEGRSK 254
Query: 146 NRRAIVF 152
NRR +
Sbjct: 255 NRRTEII 261
>gi|262195177|ref|YP_003266386.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
gi|262078524|gb|ACY14493.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
Length = 490
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/139 (25%), Positives = 56/139 (40%), Gaps = 7/139 (5%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGD------SVFFDTSSYSIRPADIQVLSNLG 73
D + + + + ++ V + + F +S I P +VL
Sbjct: 321 AADQCMNEPETANGYQDGDGCPDEIPEEVKNYTGSIEGIRFANNSDRILPVSRKVLDEAA 380
Query: 74 SW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
+E D I GH+D+ G R+ +I L RRA AV Y V +G+ SR+ +G +
Sbjct: 381 RILVEYPDLRVEISGHSDDRGKRDFNIDLSKRRAEAVRVYLVGKGVEDSRLVSMGFGPDR 440
Query: 133 PSVYGHDEDAYAKNRRAIV 151
P V AKNRR
Sbjct: 441 PLVENTSNANRAKNRRVEF 459
>gi|218548466|ref|YP_002382257.1| outer membrane protein A [Escherichia fergusonii ATCC 35469]
gi|218356007|emb|CAQ88623.1| outer membrane protein A (3a;II*;G;d) [Escherichia fergusonii ATCC
35469]
Length = 375
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 60/158 (37%), Gaps = 12/158 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + +S + + ++ V F+ + +++P L
Sbjct: 210 GLLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLKSDVLFNFNKATLKPEGQAALDQ 269
Query: 72 LGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L S L + D ++ G+ D +GS + L RRA +V +Y +++GI A ++
Sbjct: 270 LYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRAQSVVDYLISKGIPADKISARGM 329
Query: 129 GKEMPS--VYGHDEDAYAK-------NRRAIVFLKGCR 157
G+ P + A +RR + +KG +
Sbjct: 330 GESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKGIK 367
>gi|241663267|ref|YP_002981627.1| OmpA/MotB domain-containing protein [Ralstonia pickettii 12D]
gi|240865294|gb|ACS62955.1| OmpA/MotB domain protein [Ralstonia pickettii 12D]
Length = 431
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 52/137 (37%), Gaps = 13/137 (9%)
Query: 35 LNESSLQEQFSSSVGDSVFFDT--------SSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+E+ + S+ GD ++ S I P + L L L D I
Sbjct: 284 TSETGASQFGLSTEGDRIYIVFSSGMGFAAGSADITPMLARQLERLAGVL-TTDGKVTIV 342
Query: 87 GHADELG----SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
GH D+ +++AL RA AV A G+S +R+ G + P +
Sbjct: 343 GHTDDSPGARGRTETNLALSAARAMAVGRNLQAHGLSETRLSTMGRGAKEPVGDNKTAEG 402
Query: 143 YAKNRRAIVFLKGCRAN 159
A NRR + L RA+
Sbjct: 403 RALNRRVEIVLDRQRAS 419
>gi|91210052|ref|YP_540038.1| outer membrane protein A [Escherichia coli UTI89]
gi|237707059|ref|ZP_04537540.1| outer membrane protein A [Escherichia sp. 3_2_53FAA]
gi|91071626|gb|ABE06507.1| outer membrane protein A precursor [Escherichia coli UTI89]
gi|226898269|gb|EEH84528.1| outer membrane protein A [Escherichia sp. 3_2_53FAA]
Length = 375
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F + +++P L L S L + D ++ G+ D +GS + AL
Sbjct: 245 TLKSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQALSE 304
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RRA +V +Y +++GI A ++ G+ P + A +RR + +K
Sbjct: 305 RRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVK 364
Query: 155 GCR 157
G +
Sbjct: 365 GIK 367
>gi|116249130|ref|YP_764971.1| putative outer membrane porin involved in nitrogen fixation
[Rhizobium leguminosarum bv. viciae 3841]
gi|16326461|gb|AAL17783.1|AF361470_3 ImpK [Rhizobium leguminosarum bv. trifolii]
gi|115253780|emb|CAK12174.1| putative outer membrane porin involved in nitrogen fixation
[Rhizobium leguminosarum bv. viciae 3841]
Length = 510
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 40/131 (30%), Gaps = 5/131 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ ++ S + + +S F T S + +L +G L + ++
Sbjct: 346 QPEVEKKLVTLSDSNGRLLVRISNSGLFATGSAEVSQKFHDLLQRIGGALAAENFRAVVV 405
Query: 87 GHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
G+ D + S+ L RA AV + + P +
Sbjct: 406 GYTDNVPIRTVQFPSNWHLSEARAKAVGEILSS-FTGPGAILTEGRADTDPIAANDTPEG 464
Query: 143 YAKNRRAIVFL 153
NRR + +
Sbjct: 465 REMNRRTEILV 475
>gi|332559394|ref|ZP_08413716.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides WS8N]
gi|332277106|gb|EGJ22421.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides WS8N]
Length = 310
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 2/114 (1%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIA 100
E+ ++V + + F + S + L++L WL++ +I GH D G ++
Sbjct: 194 EETGAAVLEELVFGSGSAELEDRAYPALADLAQWLKEDPARRVVIVGHTDASGGLEGNVT 253
Query: 101 LGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V +AR + +++ G P E+ A+NRR V L
Sbjct: 254 LSRARAASVRERLIARHGVDGAQVTADGVGYLAPRATNRTEEGRARNRRVEVML 307
>gi|166711987|ref|ZP_02243194.1| flagellar motor protein MotD [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 324
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 45/121 (37%), Gaps = 4/121 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ + F T S ++ LS L S L + +EG+ D S+
Sbjct: 158 IEVEINSDILFGTGSAALAGNARTTLSTLASVLREAPNGVRVEGYTDNQPIATAQFPSNW 217
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
L RA +V + F G++ R+ + YG+ E NRR ++ + A
Sbjct: 218 ELSAARAASVVHLFADDGVAPQRLAMVGYGEFRARADNSTEAGRNANRRVVLIILADSAG 277
Query: 160 T 160
+
Sbjct: 278 S 278
>gi|325294742|ref|YP_004281256.1| OmpA/MotB domain protein [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325065190|gb|ADY73197.1| OmpA/MotB domain protein [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 255
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 50/123 (40%), Gaps = 8/123 (6%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE--KHDCDFLIEGHAD------E 91
QE + + V F +S + P + L + ++ + IEGH
Sbjct: 97 TQEYVLLRLFNKVLFKPNSLELTPKAKEALDKVAEIIKKLPGNYQVRIEGHTSIEEPTKY 156
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
L + L +RRA V Y V+RG++ ++ YG P + A+NRR +
Sbjct: 157 LPYIHDDWDLSIRRATTVAKYLVSRGVNPKKIIAVGYGNTRPLYTWKNPILQARNRRVEI 216
Query: 152 FLK 154
+L+
Sbjct: 217 YLE 219
>gi|302341787|ref|YP_003806316.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075]
gi|301638400|gb|ADK83722.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075]
Length = 354
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 54/144 (37%), Gaps = 5/144 (3%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
+ + + + P L +S + + + +++ FD ++P + L L
Sbjct: 208 LRAAAGEGMPGAAGQPAEGLQITSAEGRLVIRLPENITFDLGQALLKPVMAETLGRLAPV 267
Query: 76 L-EKHDCDFLIEGHAD----ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
+ C ++ GH D S+ L RA AV A G+ A R+ +
Sbjct: 268 VLRNPQCQVIVTGHTDDLPISTAQFASNWELSAARAAAVARALTAHGVPAGRLHIRGMAD 327
Query: 131 EMPSVYGHDEDAYAKNRRAIVFLK 154
+ P + + +NRR + L+
Sbjct: 328 QSPLLPNDSPENRQQNRRVEIELR 351
>gi|301309047|ref|ZP_07214992.1| outer membrane protein, OmpA family [Bacteroides sp. 20_3]
gi|300833073|gb|EFK63698.1| outer membrane protein, OmpA family [Bacteroides sp. 20_3]
Length = 277
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 49/127 (38%), Gaps = 6/127 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
L + + ++ D + F + S + + L+ L +++D D IEGH D
Sbjct: 138 SDELTVTEKNGKVYVAMSDKLLFQSGSAKVDKRGKEALAKLAEVLNKQNDIDVYIEGHTD 197
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ L + RA +V G++ +++ G+ MP D +K
Sbjct: 198 SKPINTAQFKDNWDLSVIRATSVVRILTKDYGVNPLQIQPCGRGEFMPVADNETADGRSK 257
Query: 146 NRRAIVF 152
NRR +
Sbjct: 258 NRRTEII 264
>gi|300937693|ref|ZP_07152496.1| outer membrane protein A [Escherichia coli MS 21-1]
gi|301023085|ref|ZP_07186892.1| outer membrane protein A [Escherichia coli MS 69-1]
gi|300397206|gb|EFJ80744.1| outer membrane protein A [Escherichia coli MS 69-1]
gi|300457294|gb|EFK20787.1| outer membrane protein A [Escherichia coli MS 21-1]
Length = 358
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 59/158 (37%), Gaps = 12/158 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + +S + + ++ V F + +++P L
Sbjct: 193 GMLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLKSDVLFTFNKATLKPEGQAALDQ 252
Query: 72 LGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L S L + D ++ G+ D +GS + L RRA +V +Y +++GI A ++
Sbjct: 253 LYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRAQSVVDYLISKGIPADKISARGM 312
Query: 129 GKEMPS--VYGHDEDAYAK-------NRRAIVFLKGCR 157
G+ P + A +RR + +KG +
Sbjct: 313 GESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKGIK 350
>gi|269792934|ref|YP_003317838.1| OmpA/MotB domain-containing protein [Thermanaerovibrio
acidaminovorans DSM 6589]
gi|269100569|gb|ACZ19556.1| OmpA/MotB domain protein [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 241
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 43/118 (36%), Gaps = 5/118 (4%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RN 96
Q + S+ + F S + P +VL +G L EGH D
Sbjct: 118 QRGVTVSMSEQFLFAPGSAELSPFARRVLFKVGQVLRVVRFPLSFEGHTDNTPMEGGLYG 177
Query: 97 SSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA AV +Y V R + ++ YG P V + A NRR + +
Sbjct: 178 DNWGLSAARAAAVASYMVNRIGLSDKNVQAVGYGPSKPLVPNDTPEHRAINRRVDIVI 235
>gi|183222805|ref|YP_001840801.1| hypothetical protein LEPBI_I3466 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|167781227|gb|ABZ99525.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 461
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 4/142 (2%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG---DSVFFDTSSYSIRPADIQVLSNL 72
+ +D I + E+ +Q++ + DSV+F+ +S ++ L ++
Sbjct: 317 LFCRRVDGKSFDIFTASVPKQENLVQKKLEETKKISLDSVYFERASSVLKSESSIPLDSI 376
Query: 73 GSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
+ E D I GH D G+ + ++ L RA +V Y V++G+ +R+ G
Sbjct: 377 VDYLHENSDQKMKIIGHTDLTGTYDDNMVLSKERAESVKQYLVSKGVDPNRLVTEGKGPT 436
Query: 132 MPSVYGHDEDAYAKNRRAIVFL 153
P V G DE + KNRR L
Sbjct: 437 QPMVQGTDEASSKKNRRTEFVL 458
>gi|189912837|ref|YP_001964392.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167777513|gb|ABZ95814.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
Length = 423
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 4/142 (2%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG---DSVFFDTSSYSIRPADIQVLSNL 72
+ +D I + E+ +Q++ + DSV+F+ +S ++ L ++
Sbjct: 279 LFCRRVDGKSFDIFTASVPKQENLVQKKLEETKKISLDSVYFERASSVLKSESSIPLDSI 338
Query: 73 GSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
+ E D I GH D G+ + ++ L RA +V Y V++G+ +R+ G
Sbjct: 339 VDYLHENSDQKMKIIGHTDLTGTYDDNMVLSKERAESVKQYLVSKGVDPNRLVTEGKGPT 398
Query: 132 MPSVYGHDEDAYAKNRRAIVFL 153
P V G DE + KNRR L
Sbjct: 399 QPMVQGTDEASSKKNRRTEFVL 420
>gi|188991572|ref|YP_001903582.1| flagellar motor protein MotD [Xanthomonas campestris pv. campestris
str. B100]
gi|167733332|emb|CAP51531.1| motB1 [Xanthomonas campestris pv. campestris]
Length = 324
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 44/121 (36%), Gaps = 4/121 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ + F T S + + LS L + L +EG+ D S+
Sbjct: 158 IEVEINSDILFVTGSALLAGSARGTLSTLAAVLRDAPNGVRVEGYTDNQPIATAQFPSNW 217
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
L RA +V + F G++ R+ + YG+ E NRR ++ + A
Sbjct: 218 ELSAARAASVVHLFADEGVAPQRLAMVGYGEFRARADNSTEAGRNANRRVVLIILADSAG 277
Query: 160 T 160
+
Sbjct: 278 S 278
>gi|156934557|ref|YP_001438473.1| outer membrane protein A [Cronobacter sakazakii ATCC BAA-894]
gi|156532811|gb|ABU77637.1| hypothetical protein ESA_02391 [Cronobacter sakazakii ATCC BAA-894]
Length = 358
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L L S L + D ++ G D +GS + L
Sbjct: 228 TLKSDVLFNFNKATLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSE 287
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
+RA +V +Y +++GI ++++ G+ P + A +RR + +K
Sbjct: 288 KRAQSVVDYLISKGIPSNKISARGMGESNPVTGNTCDNVKPRAALIECLGPDRRVEIEVK 347
Query: 155 GCR 157
G +
Sbjct: 348 GVK 350
>gi|83646323|ref|YP_434758.1| outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hahella chejuensis KCTC 2396]
gi|83634366|gb|ABC30333.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hahella chejuensis KCTC 2396]
Length = 483
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 42/115 (36%), Gaps = 2/115 (1%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSI 99
Q+ F + I+ + +++ + +++ ++ GH D GS +
Sbjct: 359 QKDNVLIRAHGFNFPSGKSEIQGENFALVNKIIEAVKEFPNAQVVVSGHTDNRGSTELNQ 418
Query: 100 ALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L +RA V G ++ YG++ P + A NRR V +
Sbjct: 419 GLSQQRAEEVAKMLNEIGRIPSDKITAMGYGEQRPVSTNDTMEGRADNRRVEVLI 473
>gi|315619153|gb|EFU99733.1| outer membrane protein A [Escherichia coli 3431]
Length = 346
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P L L S L + D ++ G+ D +GS + L
Sbjct: 216 TLKSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSE 275
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RRA +V +Y +++GI A ++ G+ P + A +RR + +K
Sbjct: 276 RRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVK 335
Query: 155 GCR 157
G +
Sbjct: 336 GIK 338
>gi|284920801|emb|CBG33864.1| outer membrane protein A [Escherichia coli 042]
Length = 350
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 59/158 (37%), Gaps = 12/158 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + +S + + ++ V F + +++P L
Sbjct: 185 GMLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLKSDVLFTFNKATLKPEGQAALDQ 244
Query: 72 LGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L S L + D ++ G+ D +GS + L RRA +V +Y +++GI A ++
Sbjct: 245 LYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRAQSVVDYLISKGIPADKISARGM 304
Query: 129 GKEMPS--VYGHDEDAYAK-------NRRAIVFLKGCR 157
G+ P + A +RR + +KG +
Sbjct: 305 GESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKGIK 342
>gi|315127296|ref|YP_004069299.1| chemotaxis protein [Pseudoalteromonas sp. SM9913]
gi|315015810|gb|ADT69148.1| putative chemotaxis protein [Pseudoalteromonas sp. SM9913]
Length = 320
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 47/119 (39%), Gaps = 4/119 (3%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE----LGSR 95
Q+ + + F + S +++ + + + D + G+ D
Sbjct: 148 SQDWLVIELNSGLLFASGSAVAHNKAKEIVKKIEAIIASVDNYIRVRGYTDNETIRNEIF 207
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
S+ L + RA ++ GI ++RM + YG+ P + E A+NR+ ++ L
Sbjct: 208 RSNWELSVARATSILVELERLGIESARMAIEGYGQYSPFADNNTEAGRAENRKVVIALS 266
>gi|298386938|ref|ZP_06996492.1| flagellar motor protein MotB [Bacteroides sp. 1_1_14]
gi|298260088|gb|EFI02958.1| flagellar motor protein MotB [Bacteroides sp. 1_1_14]
Length = 280
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 47/127 (37%), Gaps = 6/127 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
L + ++ D + F + S + + L L ++ D D IEGH D
Sbjct: 135 TDELTVREKDGKVYVAMSDKLLFQSGSARLDKRGEEALGKLAEVLNKQTDIDVFIEGHTD 194
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ L + RA +V + ++ +++ + G+ MP + +K
Sbjct: 195 NKPINTVQFKDNWDLSVIRATSVVRILIKNYGVNPLQIQPSGRGEYMPVDDNETAEGRSK 254
Query: 146 NRRAIVF 152
NRR +
Sbjct: 255 NRRTEII 261
>gi|281426147|ref|ZP_06257060.1| OmpA family protein [Prevotella oris F0302]
gi|299141901|ref|ZP_07035036.1| OmpA family protein [Prevotella oris C735]
gi|281399723|gb|EFB30554.1| OmpA family protein [Prevotella oris F0302]
gi|298576752|gb|EFI48623.1| OmpA family protein [Prevotella oris C735]
Length = 284
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 11/119 (9%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADE---------LGSR 95
S+ D++ + + SY I + L + ++ D D LIEG+ D + +
Sbjct: 147 ISLADNMLYKSGSYEINDRAEETLRKIAKIIMDYKDYDVLIEGNTDNVPVNTKSAAMKNI 206
Query: 96 NSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L RA +V Y R R+ G+ P E +NRR + +
Sbjct: 207 RNNWDLSALRASSVVQYLQDRFGVAPKRLTAGGRGEYNPVASNDTELGKQRNRRTQIII 265
>gi|284036645|ref|YP_003386575.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
gi|283815938|gb|ADB37776.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
Length = 322
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 51/144 (35%), Gaps = 3/144 (2%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-- 71
M + + K++ P T + ++ S ++F + + D
Sbjct: 179 AMSTDTATAPAVVKLTEPTTEKALAEAEKFTSVFKPIDLYFPLAQANYLQTDETKKFFAE 238
Query: 72 -LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
+ D ++ GH D G ++ L RA V N GI AS+++V + G+
Sbjct: 239 AVAYLSSHKDKKLVLTGHTDSSGPDAVNMQLSRDRANDVKNKLRKTGIEASQIEVRAKGE 298
Query: 131 EMPSVYGHDEDAYAKNRRAIVFLK 154
P NRR V ++
Sbjct: 299 TEPKADNSTISGRKANRRVSVVVE 322
>gi|29348538|ref|NP_812041.1| putative flagellar motor protein MotB [Bacteroides thetaiotaomicron
VPI-5482]
gi|253569097|ref|ZP_04846507.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|29340443|gb|AAO78235.1| putative flagellar motor protein MotB [Bacteroides thetaiotaomicron
VPI-5482]
gi|251841116|gb|EES69197.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
Length = 280
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 47/127 (37%), Gaps = 6/127 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
L + ++ D + F + S + + L L ++ D D IEGH D
Sbjct: 135 TDELTVREKDGKVYVAMSDKLLFQSGSARLDKRGEEALGKLAEVLNKQTDIDVFIEGHTD 194
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ L + RA +V + ++ +++ + G+ MP + +K
Sbjct: 195 NKPINTVQFKDNWDLSVIRATSVVRILIKNYGVNPLQIQPSGRGEYMPVDDNETAEGRSK 254
Query: 146 NRRAIVF 152
NRR +
Sbjct: 255 NRRTEII 261
>gi|331662369|ref|ZP_08363292.1| outer membrane protein A [Escherichia coli TA143]
gi|331682461|ref|ZP_08383080.1| outer membrane protein A [Escherichia coli H299]
gi|331060791|gb|EGI32755.1| outer membrane protein A [Escherichia coli TA143]
gi|331080092|gb|EGI51271.1| outer membrane protein A [Escherichia coli H299]
Length = 346
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F + +++P L L S L + D ++ G+ D +GS + L
Sbjct: 216 TLKSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSE 275
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RRA +V +Y +++GI A ++ G+ P + A +RR + +K
Sbjct: 276 RRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVK 335
Query: 155 GCR 157
G +
Sbjct: 336 GIK 338
>gi|295136349|ref|YP_003587025.1| OmpA/MotB family outer hypothetical protein [Zunongwangia profunda
SM-A87]
gi|294984364|gb|ADF54829.1| OmpA/MotB family outer membrane protein [Zunongwangia profunda
SM-A87]
Length = 316
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 48/129 (37%), Gaps = 7/129 (5%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
L + S+ + + F++ S+++ Q ++ LGS + D LIEGH D
Sbjct: 173 GKGLTVEQRDGKVYVSMENKLLFNSGSWAVNADGRQAVNQLGSVLAQNPDISVLIEGHTD 232
Query: 91 ELGSR-----NSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYA 144
+ + L +RA A+ I + G+ P + A
Sbjct: 233 NVPYGGNGPLKDNWDLSTKRATAIVQILRENSNIDPQNLTAAGRGEYAPVATNDTAEGKA 292
Query: 145 KNRRAIVFL 153
KNRR V L
Sbjct: 293 KNRRIEVIL 301
>gi|293409335|ref|ZP_06652911.1| outer membrane protein A [Escherichia coli B354]
gi|291469803|gb|EFF12287.1| outer membrane protein A [Escherichia coli B354]
Length = 350
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F + +++P L L S L + D ++ G+ D +GS + L
Sbjct: 220 TLKSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSE 279
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RRA +V +Y +++GI A ++ G+ P + A +RR + +K
Sbjct: 280 RRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVK 339
Query: 155 GCR 157
G +
Sbjct: 340 GIK 342
>gi|158536383|gb|ABW72716.1| outer membrane protein A [Escherichia coli]
Length = 354
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F + +++P L L S L + D ++ G+ D +GS + L
Sbjct: 224 TLKSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSE 283
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RRA +V +Y +++GI A ++ G+ P + A +RR + +K
Sbjct: 284 RRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVK 343
Query: 155 GCR 157
G +
Sbjct: 344 GIK 346
>gi|37680143|ref|NP_934752.1| outer membrane protein [Vibrio vulnificus YJ016]
gi|320156108|ref|YP_004188487.1| outer membrane protein [Vibrio vulnificus MO6-24/O]
gi|326423995|ref|NP_761229.2| outer membrane protein [Vibrio vulnificus CMCP6]
gi|37198889|dbj|BAC94723.1| outer membrane protein [Vibrio vulnificus YJ016]
gi|319931420|gb|ADV86284.1| outer membrane protein [Vibrio vulnificus MO6-24/O]
gi|319999372|gb|AAO10756.2| Outer membrane protein [Vibrio vulnificus CMCP6]
Length = 223
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
V E + Q + + + F +SSY++ + L + +E D +I+G D
Sbjct: 97 SGVQVERVGENQLLLRLENGIGFSSSSYALDSSIHNTLKGVAQILVEYPDTSLVIDGFTD 156
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G+ S+ L RRA +V ++ +++ ++A R G+ P + A NRR
Sbjct: 157 STGNDASNQILSERRAESVRSFLISQNVAAGRAVARGNGERYPLCTNSTAEGRACNRRVE 216
Query: 151 VFL 153
+ +
Sbjct: 217 IQI 219
>gi|311280141|ref|YP_003942372.1| OmpA/MotB domain-containing protein [Enterobacter cloacae SCF1]
gi|308749336|gb|ADO49088.1| OmpA/MotB domain protein [Enterobacter cloacae SCF1]
Length = 362
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L L S L + D ++ G+ D +GS + L
Sbjct: 232 TLKSDVLFNFNKATLKPEGKQALDQLYSQLSNLDPKDGSVVVLGYTDRIGSEAYNQKLST 291
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
+RA +V +Y V++GI A+++ GK P ++ A A +RR + +K
Sbjct: 292 QRAQSVVDYLVSKGIPANKISARGMGKSDPVTGSTCNNVKARAALIDCLAPDRRVEIEVK 351
Query: 155 GCR 157
G +
Sbjct: 352 GIK 354
>gi|220918574|ref|YP_002493878.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
gi|219956428|gb|ACL66812.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 242
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 2/124 (1%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
E+S+ + + SV F ++ P Q L L L++ L++G+ D
Sbjct: 119 AAAAPEASVPPECADVTAFSVHFAFDRSNLTPESQQNLQKLADCLKQAPAKRVLVQGNCD 178
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
E G+ ++ALG RRA + Y G+S+S + SYG+E P E ++KNRR
Sbjct: 179 ERGTAQYNVALGNRRAESAKKYLTDLGVSSS-VDTVSYGEEKPVCSEATEACWSKNRRDD 237
Query: 151 VFLK 154
++
Sbjct: 238 FQIE 241
>gi|150006781|ref|YP_001301524.1| putative flagellar motor protein MotB [Parabacteroides distasonis
ATCC 8503]
gi|149935205|gb|ABR41902.1| putative flagellar motor protein MotB [Parabacteroides distasonis
ATCC 8503]
Length = 277
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 49/127 (38%), Gaps = 6/127 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
L + + ++ D + F + S + + L+ L +++D D IEGH D
Sbjct: 138 SDELTVTEKNGKVYVAMSDKLLFQSGSAKVDKRGKEALAKLAEVLNKQNDIDVYIEGHTD 197
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ L + RA +V G++ +++ G+ MP D +K
Sbjct: 198 SKPINTAQFKDNWDLSVIRATSVVRILTKDYGVNPLQIQPCGRGEFMPVADNETADGRSK 257
Query: 146 NRRAIVF 152
NRR +
Sbjct: 258 NRRTEII 264
>gi|218704380|ref|YP_002411899.1| outer membrane protein A [Escherichia coli UMN026]
gi|293404256|ref|ZP_06648250.1| outer membrane protein A [Escherichia coli FVEC1412]
gi|298380040|ref|ZP_06989645.1| outer membrane protein A [Escherichia coli FVEC1302]
gi|51235574|gb|AAT98588.1| outer membrane protein A [Escherichia coli]
gi|218431477|emb|CAR12355.1| outer membrane protein A (3a;II*;G;d) [Escherichia coli UMN026]
gi|291428842|gb|EFF01867.1| outer membrane protein A [Escherichia coli FVEC1412]
gi|298279738|gb|EFI21246.1| outer membrane protein A [Escherichia coli FVEC1302]
Length = 346
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F + +++P L L S L + D ++ G+ D +GS + L
Sbjct: 216 TLKSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSE 275
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RRA +V +Y +++GI A ++ G+ P + A +RR + +K
Sbjct: 276 RRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVK 335
Query: 155 GCR 157
G +
Sbjct: 336 GIK 338
>gi|50085748|ref|YP_047258.1| putative outer membrane lipoprotein [Acinetobacter sp. ADP1]
gi|49531724|emb|CAG69436.1| putative outer membrane lipoprotein [Acinetobacter sp. ADP1]
Length = 254
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 42/106 (39%), Gaps = 1/106 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
+ F++ S + + Q+L + + + I GH D G + ++ L RA
Sbjct: 148 NRIIEFESGSAILTASGQQILDEMAAALKKVGGKKVKIIGHTDSSGDASKNLVLSQERAV 207
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV NY + + IS+ + G P + KNRR +
Sbjct: 208 AVKNYLITKNISSDNLSTEGVGSNKPVADNTTAEGRRKNRRIEFEV 253
>gi|299134154|ref|ZP_07027347.1| OmpA/MotB domain protein [Afipia sp. 1NLS2]
gi|298590901|gb|EFI51103.1| OmpA/MotB domain protein [Afipia sp. 1NLS2]
Length = 338
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 12/118 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIEGHAD----ELGSR 95
VFFD+ S ++ P L L + L + ++GH D
Sbjct: 218 FQSEVFFDSGSAALLPEGRNELDQLATALGDLEKKIPAEIPWVLRVDGHTDVRPINSPQF 277
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA +V Y ++RG+S R+ +G+ P G E+AY +NRR + L
Sbjct: 278 KSNWDLSAARAISVVQYLISRGVSPQRLVAAGFGEFQPLDTGTTEEAYKRNRRIELKL 335
>gi|126463345|ref|YP_001044459.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
17029]
gi|126105009|gb|ABN77687.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17029]
Length = 310
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 2/114 (1%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIA 100
E+ ++V + + F + S + L++L WL++ +I GH D G ++
Sbjct: 194 EETGAAVLEELVFGSGSAELEDRAYPALADLAQWLKEDPARRVVIVGHTDASGGLEGNVT 253
Query: 101 LGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V +AR + +++ G P E+ A+NRR V L
Sbjct: 254 LSRARAVSVRERLIARHGVDGAQVTADGVGYLAPRATNRTEEGRARNRRVEVML 307
>gi|163800218|ref|ZP_02194119.1| hypothetical protein 1103602000595_AND4_06044 [Vibrio sp. AND4]
gi|159175661|gb|EDP60455.1| hypothetical protein AND4_06044 [Vibrio sp. AND4]
Length = 298
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 59/158 (37%), Gaps = 9/158 (5%)
Query: 1 MQYSTIFI--ILSAITMMSISGIDNLDTKISSPDTVLN------ESSLQEQFSSSVGDSV 52
M+ + + +++ ++ S + + +N L Q + +
Sbjct: 1 MKTTIRLLSGMIAGAILVGCSADAYVSQENREKFADVNVSKFLISECLAPQREIHIAVAE 60
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FD IR AD L ++ I GH D GS + L +RRA +V Y
Sbjct: 61 HFDFDESVIREADAASLDAFIRDIQGLSGRITIVGHTDFKGSDEYNEKLSMRRAESVKAY 120
Query: 113 FVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
+ +V +G+ P V G + A A+NRRA
Sbjct: 121 LEQQLDLDQYDWEVKHFGESQPLVLGESDQARAENRRA 158
Score = 53.3 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FD + ++P ++ L + + L+ + ++ GH D++G+ + + L RRA V Y
Sbjct: 190 HFDFDNSELKPEELSQLDDFIAKLQGLEGSIMVAGHTDQVGALSYNEQLAERRAQNVVAY 249
Query: 113 FVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ + +V ++G+ P + A A NRRA + K
Sbjct: 250 LKTKLDPSQFAWEVKAFGELQPVINEVSPQANALNRRAFIVFK 292
>gi|91785602|ref|YP_560808.1| OmpA/MotB family outer membrane protein [Burkholderia xenovorans
LB400]
gi|91689556|gb|ABE32756.1| outer membrane porin, OmpA/MotB family [Burkholderia xenovorans
LB400]
Length = 584
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/161 (15%), Positives = 54/161 (33%), Gaps = 10/161 (6%)
Query: 2 QYSTIF-----IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDT 56
+ ++F I + +N + + + ++ + + F +
Sbjct: 421 KLKSLFGASYQIGSFDVAHAVADATENFRSAVKGLLGADSSCAVADVVKVLNLQVINFAS 480
Query: 57 SSYSIRPADIQVLSNLGSWLEKH-----DCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
+S + + ++ L+ L + G++D +G +++ L +RA AV
Sbjct: 481 ASARVPASAVEDLNQSAHVLNACAGNGKTARLEVAGYSDNVGGEAANLQLSKQRAEAVRA 540
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
Y V G+ A + YG P NRR
Sbjct: 541 YLVRTGVPADSLIAQGYGDARPVASNDTASGRFANRRIEFV 581
>gi|71280429|ref|YP_268267.1| putative chemotaxis MotB protein [Colwellia psychrerythraea 34H]
gi|71146169|gb|AAZ26642.1| putative chemotaxis MotB protein [Colwellia psychrerythraea 34H]
Length = 329
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 48/117 (41%), Gaps = 4/117 (3%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL----GSRNS 97
+ + + F + S S + +L+ + + + + G+ D +S
Sbjct: 146 DWLEIELNSGLLFPSGSSSATLSAEAILTVIYDVIGQASNFIRVRGYTDNQVINNEIYSS 205
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ L + RA A+ G++ +RM + YG+ PS + AKNR+ +V +
Sbjct: 206 NWELSVFRATAILRVLEKLGLNPARMAIEGYGQYYPSADNLTSEGRAKNRKVVVAIS 262
>gi|220905442|ref|YP_002480754.1| OmpA/MotB domain-containing protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219869741|gb|ACL50076.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 235
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/129 (31%), Positives = 60/129 (46%), Gaps = 3/129 (2%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
S P + S+ V + F + + P +VLS++ S +E+++ ++
Sbjct: 94 ADSVPQSASGISADDVGVQLRVNSDIMFKPGTVELLPEGDKVLSSVLSLMEEYNLYLVVR 153
Query: 87 GHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
GHAD + S+ L RA A+ NY RGI A+RM+ SYG P G DE +
Sbjct: 154 GHADSVEAAPPYASAWELSGARAAAMVNYLAQRGIKATRMRAVSYGDTRPLKPGIDEQSR 213
Query: 144 AKNRRAIVF 152
A NRR F
Sbjct: 214 AMNRRVEFF 222
>gi|162451106|ref|YP_001613473.1| hypothetical protein sce2834 [Sorangium cellulosum 'So ce 56']
gi|161161688|emb|CAN92993.1| putative membrane protein [Sorangium cellulosum 'So ce 56']
Length = 634
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 47/142 (33%), Gaps = 7/142 (4%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
SG + + L E V I P VL+ + +E
Sbjct: 498 ASGDARASGCPTRVRVQGEQIVLLEPVVFRV-----LKNDPAPIDPKSEAVLAEVRDVIE 552
Query: 78 KH--DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+H + H D G+ + L RA AV + V +GI+A R+ YG P
Sbjct: 553 QHPEWVKIEVSAHTDGAGNARFNETLTTARAEAVRRWLVGKGIAAERLVAKGYGASQPIS 612
Query: 136 YGHDEDAYAKNRRAIVFLKGCR 157
KNRR + + R
Sbjct: 613 DDRSAAGREKNRRVQLLVLEKR 634
>gi|153837220|ref|ZP_01989887.1| flagellar motor protein [Vibrio parahaemolyticus AQ3810]
gi|260366108|ref|ZP_05778568.1| flagellar motor protein [Vibrio parahaemolyticus K5030]
gi|260879749|ref|ZP_05892104.1| flagellar motor protein [Vibrio parahaemolyticus AN-5034]
gi|260896795|ref|ZP_05905291.1| flagellar motor protein [Vibrio parahaemolyticus Peru-466]
gi|260903584|ref|ZP_05911979.1| flagellar motor protein [Vibrio parahaemolyticus AQ4037]
gi|149749483|gb|EDM60237.1| flagellar motor protein [Vibrio parahaemolyticus AQ3810]
gi|308087342|gb|EFO37037.1| flagellar motor protein [Vibrio parahaemolyticus Peru-466]
gi|308092264|gb|EFO41959.1| flagellar motor protein [Vibrio parahaemolyticus AN-5034]
gi|308109501|gb|EFO47041.1| flagellar motor protein [Vibrio parahaemolyticus AQ4037]
gi|308114754|gb|EFO52294.1| flagellar motor protein [Vibrio parahaemolyticus K5030]
Length = 430
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 47/121 (38%), Gaps = 4/121 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+ +LQ++ S+ F++ S S+ V+S + LE +I GH D+
Sbjct: 304 VTVEALQDRVRISLKAQDLFESGSASVVAYIQPVISKVARTLEATQGKIIITGHTDDRPI 363
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
S+ L L RA ++ ++ R+ G P V E A NRR
Sbjct: 364 FTSKYPSNWHLSLARATSLSEQLISNSALKGRVIPEGLGDARPLVENDSEKNRAMNRRIE 423
Query: 151 V 151
+
Sbjct: 424 I 424
>gi|294508627|ref|YP_003572686.1| chemotaxis motB protein [Salinibacter ruber M8]
gi|294344956|emb|CBH25734.1| Chemotaxis motB protein [Salinibacter ruber M8]
Length = 263
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 43/117 (36%), Gaps = 6/117 (5%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RN 96
+E + DS+ F T + VL L + L + ++ GH D+
Sbjct: 121 KEGIHVVIADSLMFRTGRARLLKPSRTVLRELANLLSRDVGSVVVSGHTDDRPIGTRKFP 180
Query: 97 SSIALGLRRAYAVFNYFVAR--GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
S+ L RA + + R +SR + + P ++ AKNRR +
Sbjct: 181 SNWELSTARAASAVRFLQERAPEYDSSRFQAVGHASTDPRASNQTDEGRAKNRRVEI 237
>gi|332533102|ref|ZP_08408971.1| flagellar motor rotation protein MotB [Pseudoalteromonas
haloplanktis ANT/505]
gi|332037384|gb|EGI73838.1| flagellar motor rotation protein MotB [Pseudoalteromonas
haloplanktis ANT/505]
Length = 319
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 48/118 (40%), Gaps = 4/118 (3%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE----LGSRN 96
Q+ + + F + S QV+ + + D + G+ D+
Sbjct: 149 QDWLIIELSSGMLFSSGSSVAHSRAKQVVKIVKDIIAPVDNYVRVRGYTDDESIRNEIFR 208
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
S+ L + RA ++ A GI+++RM + YG+ P E A+NR+ ++ L
Sbjct: 209 SNWELSVARATSILVELEALGINSARMAIEGYGQYSPFASNDTEQGRAENRKVVIALS 266
>gi|256018784|ref|ZP_05432649.1| outer membrane protein A [Shigella sp. D9]
Length = 369
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P L L S L + D ++ G+ D +GS + L
Sbjct: 239 TLKSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSE 298
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RRA +V +Y +++GI A ++ G+ P + A +RR + +K
Sbjct: 299 RRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVK 358
Query: 155 GCR 157
G +
Sbjct: 359 GIK 361
>gi|220922989|ref|YP_002498291.1| type IV / VI secretion system protein, DotU family
[Methylobacterium nodulans ORS 2060]
gi|219947596|gb|ACL57988.1| type IV / VI secretion system protein, DotU family
[Methylobacterium nodulans ORS 2060]
Length = 489
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 43/123 (34%), Gaps = 5/123 (4%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+ Q + ++F ++ +L + + + I GH D
Sbjct: 364 VTVEETNSQVVVRLAAALF-APGDAAVTAEFRPLLQRVAGLIAREPGPIRIVGHTDSAPV 422
Query: 95 RN----SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
RN S+ L + RA AV A R++V G + P + A+NRR
Sbjct: 423 RNGRFASNFDLSVARAKAVAAAIRAAPEKPERLEVEGKGPDAPVAPNDTVEGRARNRRVE 482
Query: 151 VFL 153
+ +
Sbjct: 483 ILI 485
>gi|332525605|ref|ZP_08401760.1| peptidoglycan-associated lipoprotein [Rubrivivax benzoatilyticus
JA2]
gi|332109170|gb|EGJ10093.1| peptidoglycan-associated lipoprotein [Rubrivivax benzoatilyticus
JA2]
Length = 180
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
+V+FD SY ++ V+ + EGH DE G R ++ALG +RA AV
Sbjct: 76 TVYFDFDSYVVKDEYKPVIDANAKFLTLDKTVRLTAEGHTDERGGREYNLALGQKRAEAV 135
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
G +A +++ S+GKE P+ GHDE A++KNRR +
Sbjct: 136 VKALQVMGAAAGQVEPVSFGKERPADPGHDEAAWSKNRRVELK 178
>gi|332279861|ref|ZP_08392274.1| outer membrane protein A [Shigella sp. D9]
gi|332102213|gb|EGJ05559.1| outer membrane protein A [Shigella sp. D9]
Length = 374
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P L L S L + D ++ G+ D +GS + L
Sbjct: 244 TLKSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSE 303
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RRA +V +Y +++GI A ++ G+ P + A +RR + +K
Sbjct: 304 RRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVK 363
Query: 155 GCR 157
G +
Sbjct: 364 GIK 366
>gi|332093647|gb|EGI98705.1| outer membrane protein A [Shigella boydii 3594-74]
Length = 346
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P L L S L + D ++ G+ D +GS + L
Sbjct: 216 TLKSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSE 275
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RRA +V +Y +++GI A ++ G+ P + A +RR + +K
Sbjct: 276 RRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVK 335
Query: 155 GCR 157
G +
Sbjct: 336 GIK 338
>gi|167588461|ref|ZP_02380849.1| OmpA/MotB domain protein [Burkholderia ubonensis Bu]
Length = 223
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 52/133 (39%), Gaps = 5/133 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLI 85
K + + + + F+ + P VL+ + L+ H L+
Sbjct: 90 KSLKEQGQVTVVNAAHGVEIGINAKILFNVGDARLLPDASGVLARIAGVLKAHPATSILV 149
Query: 86 EGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
EGH D + S+ L RA AV Y V RG+ R+ +P V G D
Sbjct: 150 EGHTDSVPISTAKYESNWELSSARAGAVVRYLVERGVEPHRLAAIGRADNLPLVAGDDAA 209
Query: 142 AYAKNRRAIVFLK 154
A AKNRR +F++
Sbjct: 210 ARAKNRRVTIFVQ 222
>gi|77464505|ref|YP_354009.1| OmpA/MotB family protein [Rhodobacter sphaeroides 2.4.1]
gi|77388923|gb|ABA80108.1| OmpA/MotB family protein [Rhodobacter sphaeroides 2.4.1]
Length = 310
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 2/114 (1%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIA 100
E+ ++V + + F + S + L++L WL++ +I GH D G ++
Sbjct: 194 EETGAAVLEGLVFGSGSAELEDRAYPALADLAQWLKEDPARRVVIVGHTDASGGLEGNVT 253
Query: 101 LGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V +AR + +++ G P E+ A+NRR V L
Sbjct: 254 LSRARAVSVRERLIARHGVDGAQVTADGVGYLAPRATNRTEEGRARNRRVEVML 307
>gi|312891209|ref|ZP_07750731.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
gi|311296376|gb|EFQ73523.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
Length = 267
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 48/131 (36%), Gaps = 7/131 (5%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHA 89
+ L + S+ D + F + S I L L + ++ D +EGH
Sbjct: 125 QQSGLTVDIRNGKVYVSLADKLLFPSGSIVIDEKGKSALKQLAAVLNKEPDIYIAVEGHT 184
Query: 90 D-----ELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAY 143
D LG + L + RA +V Y + R+ T G+ P +A
Sbjct: 185 DDKKVINLGQIKDNWDLSVLRATSVTRYLTETEKVDPVRLTATGKGQFQPIDPAGTPEAR 244
Query: 144 AKNRRAIVFLK 154
AKNRR + L
Sbjct: 245 AKNRRIEIVLS 255
>gi|260172785|ref|ZP_05759197.1| putative flagellar motor protein MotB [Bacteroides sp. D2]
Length = 256
Score = 68.7 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 46/127 (36%), Gaps = 6/127 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
L + ++ D + F + S + + L L ++ D D IEGH D
Sbjct: 111 TDELTVREKDGKVYVAMSDKLLFQSGSARLDKRGEEALGKLAEVLNKQTDIDVFIEGHTD 170
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ L + RA +V + + +++ + G+ MP + +K
Sbjct: 171 NKPINTVQFKDNWDLSVIRATSVVRILIKNYNVNPLQIQPSGRGEYMPVDDNETAEGRSK 230
Query: 146 NRRAIVF 152
NRR +
Sbjct: 231 NRRTEII 237
>gi|256823021|ref|YP_003146984.1| OmpA/MotB domain-containing protein [Kangiella koreensis DSM 16069]
gi|256796560|gb|ACV27216.1| OmpA/MotB domain protein [Kangiella koreensis DSM 16069]
Length = 330
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 8/141 (5%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV-----FFDTSSYSIRPADIQVLSNLG 73
+ +D ++ K V+ ++S Q + V +FDT+ SI+ L +
Sbjct: 189 AQVDVVEEKAQESKVVMVKASEMAQ-EIDLNGKVALYGLYFDTNKASIKAESKPTLDEIA 247
Query: 74 SWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKE 131
L+ + L+ GH+D G + +I L RRA +V V+ G++A+R+K G
Sbjct: 248 KLLKDNPDLKLLVVGHSDNQGDFDYNIDLSKRRAESVKQALVSDYGVNAARLKPWGVGYA 307
Query: 132 MPSVYGHDEDAYAKNRRAIVF 152
P E AKNRR +
Sbjct: 308 APVASNKAEQGRAKNRRVELV 328
>gi|92115867|ref|YP_575596.1| OmpA/MotB [Nitrobacter hamburgensis X14]
gi|91798761|gb|ABE61136.1| OmpA/MotB [Nitrobacter hamburgensis X14]
Length = 334
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 43/103 (41%), Gaps = 2/103 (1%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+FFDT+ ++P L+ + LI GH D G+ + ++ L RRA AV
Sbjct: 229 IFFDTAKADLKPESNPTLAEIAGLLNADPKLAVLIVGHTDNQGAFDYNLDLSRRRAEAVV 288
Query: 111 NYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
A R++ G P+ ED AKNRR V
Sbjct: 289 KTLAANFRVEPRRLRAAGVGMMAPAASNDAEDGRAKNRRVEVV 331
>gi|313674495|ref|YP_004052491.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
gi|312941193|gb|ADR20383.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
Length = 672
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 41/105 (39%), Gaps = 1/105 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEK-HDCDFLIEGHADELGSRNSSIALGLRRAYA 108
++V+F SY I A L L L I GH + GS + L RA A
Sbjct: 565 NNVYFAQGSYEILEASHPELDRLIRLLRSSETMQIEIGGHTERRGSPRLNRILSQDRADA 624
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V Y V GI R+K YG P G E +NRR +
Sbjct: 625 VKAYIVQAGIDQKRIKTKGYGSSKPVTDGRTEIERRQNRRVEYTI 669
>gi|116620548|ref|YP_822704.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116223710|gb|ABJ82419.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076]
Length = 262
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 2/132 (1%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD- 82
+ + +++ + S + + +V F + Y++ Q L L S ++
Sbjct: 104 GEQNTQALNSLKSVVSNIDDYKLQTSVAVPFQFNKYNLSSDAKQDLDKLASDVKSDKRYF 163
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDED 141
+EG+ D+ GS+ + AL RRA AV Y VA+ R+ + G E P +
Sbjct: 164 IAVEGYTDKTGSKAYNSALSRRRADAVVEYLVAQHDVPIYRIHMIGLGDEKPVDEAKNRA 223
Query: 142 AYAKNRRAIVFL 153
A AKNRR V +
Sbjct: 224 ARAKNRRVEVKV 235
>gi|269964125|ref|ZP_06178424.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269831140|gb|EEZ85300.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 197
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 60/138 (43%), Gaps = 1/138 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
D + + + S + V F S I P + +S+L +L+++
Sbjct: 45 DLCPGTPEGAEIDNDGCGEYAKSSQEMQIRVLFANDSSEIDPVFAKQISDLSDFLKEYPT 104
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++G+ G+ ++AL RRA +V + GIS R+++ +G+ + G DE
Sbjct: 105 TSIELQGYTSITGTDEYNLALSKRRAESVRQELINNGISPDRLRIVGFGETNLASTGTDE 164
Query: 141 DAYAKNRRAIVFLKGCRA 158
++A NRR + G +
Sbjct: 165 TSHALNRRVTATVVGYKG 182
>gi|212636367|ref|YP_002312892.1| flagellar motor protein MotB [Shewanella piezotolerans WP3]
gi|212557851|gb|ACJ30305.1| MotB protein [Shewanella piezotolerans WP3]
Length = 322
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 56/133 (42%), Gaps = 5/133 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
D + SL +Q + + F + S ++P ++ +G L+ + GH D
Sbjct: 180 VDGAIEIESLGQQIIIRIREKGAFASGSGFLQPRFKPIVRRVGELLKDVPGIVTVSGHTD 239
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ +S+ L +RA AV + + +G R+KV P V + + A+
Sbjct: 240 DWNISNELYSSNWDLSSKRAVAVAHEMIRVKGFDQQRLKVVGMASSAPLVENNSQANRAR 299
Query: 146 NRRAIVFLKGCRA 158
NRR + ++ +A
Sbjct: 300 NRRVEIAIEQGKA 312
>gi|209520168|ref|ZP_03268940.1| OmpA/MotB domain protein [Burkholderia sp. H160]
gi|209499375|gb|EDZ99458.1| OmpA/MotB domain protein [Burkholderia sp. H160]
Length = 116
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 34/101 (33%), Gaps = 1/101 (0%)
Query: 54 FDTSSYSIRPADIQVL-SNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F T S + A L L + I G+ D GSR + L RA +V Y
Sbjct: 9 FATDSAILSSAAKASLDQFLRVNEGINFRRVTIIGYTDSTGSRGHNQKLSEARAQSVLRY 68
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G+ A + P + A NRR V +
Sbjct: 69 LRDHGLIAQSFVAEGAAADDPVASNATAEGRALNRRVEVRV 109
>gi|161521534|ref|YP_001584961.1| OmpA/MotB domain-containing protein [Burkholderia multivorans ATCC
17616]
gi|189352297|ref|YP_001947924.1| chemotaxis MotB protein [Burkholderia multivorans ATCC 17616]
gi|160345584|gb|ABX18669.1| OmpA/MotB domain protein [Burkholderia multivorans ATCC 17616]
gi|189336319|dbj|BAG45388.1| chemotaxis MotB protein [Burkholderia multivorans ATCC 17616]
Length = 219
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 46/116 (39%), Gaps = 5/116 (4%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGS----RNS 97
+ + F + P + VL + L H D L+EGH D + S
Sbjct: 102 GIEIGIDAGILFHVGDAHLLPDALPVLERIAQALGPHAAGDILVEGHTDSVPIANAKYES 161
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA AV Y RGI+ R+ P V G D + A+NRR +F+
Sbjct: 162 NWELSSARAGAVVRYLAERGIAPHRLAAVGRADTQPLVAGDDASSRARNRRVTIFV 217
>gi|315921071|ref|ZP_07917311.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313694946|gb|EFS31781.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 280
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 46/127 (36%), Gaps = 6/127 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
L + ++ D + F + S + + L L ++ D D IEGH D
Sbjct: 135 TDELTVREKDGKVYVAMSDKLLFQSGSARLDKRGEEALGKLAEVLNKQTDIDVFIEGHTD 194
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ L + RA +V + + +++ + G+ MP + +K
Sbjct: 195 NKPINTVQFKDNWDLSVIRATSVVRILIKNYNVNPLQIQPSGRGEYMPVDDNETAEGRSK 254
Query: 146 NRRAIVF 152
NRR +
Sbjct: 255 NRRTEII 261
>gi|224582121|ref|YP_002635919.1| hypothetical protein SPC_0290 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|224466648|gb|ACN44478.1| hypothetical protein SPC_0290 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 434
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 40/123 (32%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
L + F ++ A V++ + + + GH D
Sbjct: 310 LTVDEDDQHSRVVFRGDAMFVPGQKTVSDAIRPVINKAAREIARVGGAVTVTGHTDSQPI 369
Query: 95 RNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
++ L +RA V + G+ A R+ + G +P + AKNRR
Sbjct: 370 HSAEFPSNLVLSEKRAAEVAALLTSGGVPAGRVHIVGKGDTVPVADNGSKAGRAKNRRVE 429
Query: 151 VFL 153
+ +
Sbjct: 430 ILV 432
>gi|28900895|ref|NP_800550.1| hypothetical protein VPA1040 [Vibrio parahaemolyticus RIMD 2210633]
gi|28809341|dbj|BAC62383.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
Length = 433
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 47/121 (38%), Gaps = 4/121 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+ +LQ++ S+ F++ S S+ V+S + LE +I GH D+
Sbjct: 307 VTVEALQDRVRISLKAQDLFESGSASVVAYIQPVISKVARTLEATQGKIIITGHTDDRPI 366
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
S+ L L RA ++ ++ R+ G P V E A NRR
Sbjct: 367 FTSKYPSNWHLSLARATSLSEQLISNSALKGRVIPEGLGDARPLVENDSEKNRAMNRRIE 426
Query: 151 V 151
+
Sbjct: 427 I 427
>gi|323345464|ref|ZP_08085687.1| lipoprotein PG3 [Prevotella oralis ATCC 33269]
gi|323093578|gb|EFZ36156.1| lipoprotein PG3 [Prevotella oralis ATCC 33269]
Length = 229
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 57/143 (39%), Gaps = 3/143 (2%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-L 76
++ K + + V + + L+ + + F T+ + + L+ +
Sbjct: 77 VAAETAAQVKNAKVEQVTDANGLKA-VKVTFDSGILFATNKAELNQSSKNELAKFSTVLK 135
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSV 135
+ DC I GH D G+ +I L +RA +V Y G+SAS+ K V G P
Sbjct: 136 KNADCYVDIYGHTDSTGNDGINIPLSNQRAQSVVAYLENCGVSASQFKNVVGKGSSDPVA 195
Query: 136 YGHDEDAYAKNRRAIVFLKGCRA 158
+ NRR V++ +A
Sbjct: 196 SNDTKSGRQLNRRVEVYMYASQA 218
>gi|308186299|ref|YP_003930430.1| Outer membrane protein A precursor [Pantoea vagans C9-1]
gi|308056809|gb|ADO08981.1| Outer membrane protein A precursor [Pantoea vagans C9-1]
Length = 356
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 59/145 (40%), Gaps = 12/145 (8%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDC 81
D +P + + E ++ V F + +++P Q L L S ++ D
Sbjct: 204 DVAAPAPAPAPAPAPVVETKRFTLKSDVLFTFNKSTLKPEGQQALDQLYSQLSSMDPKDG 263
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHD 139
++ G D +GS + L +RA +V +Y V++GI ++++ GK P
Sbjct: 264 SVVVLGFTDRIGSEQYNQKLSEKRAQSVVDYLVSKGIPSNKISARGMGKSNPVTGNTCDS 323
Query: 140 EDAY-------AKNRRAIVFLKGCR 157
+ +RR + +KG +
Sbjct: 324 VKGRNALIDCLSPDRRVEIDVKGIK 348
>gi|307611849|emb|CBX01563.1| hypothetical protein LPW_32501 [Legionella pneumophila 130b]
Length = 294
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
Query: 46 SSVGDSVF-FDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALG 102
V +SVF F S + AD L + +++ I GHAD+ G + + A+
Sbjct: 181 EDVKESVFHFGVDSKLLSDADKVQLRRIAQYVDADVQIDVIKIIGHADDSGRKGYNNAIS 240
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA +V NY + G+ ++ +T G P ++ A NRR +V L
Sbjct: 241 QYRAESVKNYLIRLGVPQRKLSITWVGALQPIARNDTDEGRAANRRVVVTL 291
>gi|221640398|ref|YP_002526660.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides KD131]
gi|221161179|gb|ACM02159.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides KD131]
Length = 310
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 2/114 (1%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIA 100
E+ ++V + + F + S + L++L WL++ +I GH D G ++
Sbjct: 194 EETGAAVLEELVFGSGSAELEDRAYPALADLAQWLKEDPARRVVIVGHTDASGGLEGNVT 253
Query: 101 LGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V +AR + +++ G P E+ A+NRR V L
Sbjct: 254 LSRARAVSVRERLIARHGVDGAQVTADGVGYLAPRATNRTEEGRARNRRVEVML 307
>gi|148361303|ref|YP_001252510.1| hypothetical protein LPC_3277 [Legionella pneumophila str. Corby]
gi|148283076|gb|ABQ57164.1| hypothetical protein LPC_3277 [Legionella pneumophila str. Corby]
Length = 294
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
Query: 46 SSVGDSVF-FDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALG 102
V +SVF F S + AD L + +++ I GHAD+ G + + A+
Sbjct: 181 EDVKESVFHFGVDSKLLSDADKVQLRRIAQYVDADVQIDAIKIIGHADDSGRKGYNNAIS 240
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA +V NY + G+ ++ +T G P ++ A NRR +V L
Sbjct: 241 QYRAESVKNYLIRLGVPQRKLSITWVGALQPIARNDTDEGRAANRRVVVTL 291
>gi|311748659|ref|ZP_07722444.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Algoriphagus sp. PR1]
gi|126577188|gb|EAZ81436.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Algoriphagus sp. PR1]
Length = 643
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRA 106
V +++++D IRP L L L+ + + H D+ S + L RRA
Sbjct: 531 VLENIYYDLDKADIRPDAAVELDKLVQILKDNPSIKIELSSHTDDRSSDEYNQDLSQRRA 590
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGH-DEDAYAKNRRAIVFL 153
+ +Y V++GISA R+ YG+ + E+ + NRR +
Sbjct: 591 QSAVDYIVSQGISADRLVAKGYGESQLIIENATTEEEHQTNRRTEFKV 638
>gi|54295802|ref|YP_128217.1| hypothetical protein lpl2892 [Legionella pneumophila str. Lens]
gi|53755634|emb|CAH17136.1| hypothetical protein lpl2892 [Legionella pneumophila str. Lens]
Length = 294
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
Query: 46 SSVGDSVF-FDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALG 102
V +SVF F S + AD L + +++ I GHAD+ G + + A+
Sbjct: 181 EDVKESVFHFGVDSKLLSDADKVQLRRIAQYVDADVQIDVIKIIGHADDSGRKGYNNAIS 240
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA +V NY + G+ ++ +T G P ++ A NRR +V L
Sbjct: 241 QYRAESVKNYLIRLGVPQRKLSITWVGALQPIARNDTDEGRAANRRVVVTL 291
>gi|154244796|ref|YP_001415754.1| OmpA/MotB domain-containing protein [Xanthobacter autotrophicus
Py2]
gi|154158881|gb|ABS66097.1| OmpA/MotB domain protein [Xanthobacter autotrophicus Py2]
Length = 340
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 46/118 (38%), Gaps = 12/118 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLG--------SWLEKHDCDFLIEGHADELGS----R 95
VFFD S + RP + L L S I+GH D
Sbjct: 220 FQSEVFFDRGSATPRPEALAELDKLAGAILDLEKSIPPDISWALRIDGHTDNRPIATPQF 279
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA AV Y +++G+S + +G+ P ++A A+NRR + L
Sbjct: 280 PSNWELSAARAIAVVQYLISKGVSPQHLIAAGFGEYQPIDPAASDEARARNRRIELKL 337
>gi|326346124|gb|EGD69862.1| Outer membrane protein A precursor [Escherichia coli O157:H7 str.
1044]
Length = 273
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P L L S L + D ++ G+ D +GS + L
Sbjct: 143 TLKSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSE 202
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RRA +V +Y +++GI A ++ G+ P + A +RR + +K
Sbjct: 203 RRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVK 262
Query: 155 GCR 157
G +
Sbjct: 263 GIK 265
>gi|298377743|ref|ZP_06987694.1| flagellar motor protein MotB [Bacteroides sp. 3_1_19]
gi|298265446|gb|EFI07108.1| flagellar motor protein MotB [Bacteroides sp. 3_1_19]
Length = 280
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 49/127 (38%), Gaps = 6/127 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
L + + ++ D + F + S + + L+ L +++D D IEGH D
Sbjct: 141 SDELTVTEKNGKVYVAMSDKLLFQSGSAKVDKRGKEALAKLAEVLNKQNDIDVYIEGHTD 200
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ L + RA +V G++ +++ G+ MP D +K
Sbjct: 201 SKPINTAQFKDNWDLSVIRATSVVRILTKDYGVNPLQIQPCGRGEFMPVADNETADGRSK 260
Query: 146 NRRAIVF 152
NRR +
Sbjct: 261 NRRTEII 267
>gi|288929697|ref|ZP_06423541.1| OmpA family protein [Prevotella sp. oral taxon 317 str. F0108]
gi|288329202|gb|EFC67789.1| OmpA family protein [Prevotella sp. oral taxon 317 str. F0108]
Length = 295
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 48/114 (42%), Gaps = 6/114 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADE----LGSRNSSIA 100
S+ D++ + + SY I + LS + ++ D D L+EG+ D + ++
Sbjct: 163 ISLADNMLYKSGSYEINDRAAETLSKIAKIIMDYQDYDVLVEGNTDNVPITRENIRNNWD 222
Query: 101 LGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V Y R ++ R+ G+ P E +NRR + +
Sbjct: 223 LSCLRASSVVQYLQTRYGVNPKRLTAGGRGEFNPVATNGTEVGKQRNRRTQIII 276
>gi|195940407|ref|ZP_03085789.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4024]
Length = 267
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 60/158 (37%), Gaps = 12/158 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + +S + + ++ V F+ + +++P L
Sbjct: 102 GMLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLKSDVLFNFNKATLKPEGQAALDQ 161
Query: 72 LGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L S L + D ++ G+ D +GS + L RRA +V +Y +++GI A ++
Sbjct: 162 LYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRAQSVVDYLISKGIPADKISARGM 221
Query: 129 GKEMPS--VYGHDEDAYAK-------NRRAIVFLKGCR 157
G+ P + A +RR + +KG +
Sbjct: 222 GESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKGIK 259
>gi|189010293|ref|ZP_02805910.2| outer membrane protein A [Escherichia coli O157:H7 str. EC4076]
gi|208815928|ref|ZP_03257107.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4045]
gi|208822372|ref|ZP_03262691.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4042]
gi|209397392|ref|YP_002269625.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4115]
gi|217325746|ref|ZP_03441830.1| outer membrane protein A [Escherichia coli O157:H7 str. TW14588]
gi|291281957|ref|YP_003498775.1| OmpA domain protein transmembrane region-containing protein
precursor [Escherichia coli O55:H7 str. CB9615]
gi|293433254|ref|ZP_06661682.1| OOP family OmpA-OmpF porin [Escherichia coli B088]
gi|300929657|ref|ZP_07145117.1| outer membrane protein A [Escherichia coli MS 187-1]
gi|300949672|ref|ZP_07163655.1| outer membrane protein A [Escherichia coli MS 116-1]
gi|300955388|ref|ZP_07167765.1| outer membrane protein A [Escherichia coli MS 175-1]
gi|301022508|ref|ZP_07186383.1| outer membrane protein A [Escherichia coli MS 196-1]
gi|301643481|ref|ZP_07243528.1| outer membrane protein A [Escherichia coli MS 146-1]
gi|189001311|gb|EDU70297.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4076]
gi|208732576|gb|EDZ81264.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4045]
gi|208737857|gb|EDZ85540.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4042]
gi|209158792|gb|ACI36225.1| outer membrane protein A [Escherichia coli O157:H7 str. EC4115]
gi|217321967|gb|EEC30391.1| outer membrane protein A [Escherichia coli O157:H7 str. TW14588]
gi|290761830|gb|ADD55791.1| OmpA domain protein transmembrane region-containing protein
precursor [Escherichia coli O55:H7 str. CB9615]
gi|291324073|gb|EFE63495.1| OOP family OmpA-OmpF porin [Escherichia coli B088]
gi|299881205|gb|EFI89416.1| outer membrane protein A [Escherichia coli MS 196-1]
gi|300317723|gb|EFJ67507.1| outer membrane protein A [Escherichia coli MS 175-1]
gi|300450941|gb|EFK14561.1| outer membrane protein A [Escherichia coli MS 116-1]
gi|300462395|gb|EFK25888.1| outer membrane protein A [Escherichia coli MS 187-1]
gi|301078120|gb|EFK92926.1| outer membrane protein A [Escherichia coli MS 146-1]
gi|320187167|gb|EFW61868.1| Outer membrane protein A precursor [Shigella flexneri CDC 796-83]
gi|324019104|gb|EGB88323.1| outer membrane protein A [Escherichia coli MS 117-3]
gi|326338147|gb|EGD61976.1| Outer membrane protein A precursor [Escherichia coli O157:H7 str.
1125]
Length = 354
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P L L S L + D ++ G+ D +GS + L
Sbjct: 224 TLKSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSE 283
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RRA +V +Y +++GI A ++ G+ P + A +RR + +K
Sbjct: 284 RRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVK 343
Query: 155 GCR 157
G +
Sbjct: 344 GIK 346
>gi|168232215|ref|ZP_02657273.1| SciP protein [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|168240017|ref|ZP_02664949.1| SciP protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|194448829|ref|YP_002044265.1| hypothetical protein SeHA_C0320 [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194468900|ref|ZP_03074884.1| SciP protein [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|194407133|gb|ACF67352.1| SciP protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194455264|gb|EDX44103.1| SciP protein [Salmonella enterica subsp. enterica serovar Kentucky
str. CVM29188]
gi|205333484|gb|EDZ20248.1| SciP protein [Salmonella enterica subsp. enterica serovar Kentucky
str. CDC 191]
gi|205339891|gb|EDZ26655.1| SciP protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
Length = 434
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 40/123 (32%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
L + F ++ A V++ + + + GH D
Sbjct: 310 LTVDEDDQHSRVVFRGDAMFVPGQKTVSDAIRPVINKAAREIARVGGAVTVTGHTDSQPI 369
Query: 95 RNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
++ L +RA V + G+ A R+ + G +P + AKNRR
Sbjct: 370 HSAEFPSNLVLSEKRAAEVAALLTSGGVPAGRVHIVGKGDTVPVADNGSKAGRAKNRRVE 429
Query: 151 VFL 153
+ +
Sbjct: 430 ILV 432
>gi|149375611|ref|ZP_01893380.1| Flagellar motor protein [Marinobacter algicola DG893]
gi|149360013|gb|EDM48468.1| Flagellar motor protein [Marinobacter algicola DG893]
Length = 277
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 53/139 (38%), Gaps = 5/139 (3%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF 83
+ + L+ + + + + F + +I+P + ++ + L D
Sbjct: 123 QELEPEVASEALSVNYDESRVVIRFSEEATFRSGEAAIKPGMVPIIERVVEVLSGCTGDV 182
Query: 84 LIEGHADELGS----RNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGH 138
L+ G+ D+ S+ L RA +V + + R + A R+ + P V
Sbjct: 183 LVAGYTDDRPIASGRYRSNWDLSAARAVSVVHELVMNRQVPAERVVAAGRAETNPLVPND 242
Query: 139 DEDAYAKNRRAIVFLKGCR 157
+ AKNRR + ++ +
Sbjct: 243 SPENRAKNRRVEIAIRNPQ 261
>gi|52843156|ref|YP_096955.1| hypothetical protein lpg2962 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52630267|gb|AAU29008.1| sodium-type flagellar protein [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 299
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 3/111 (2%)
Query: 46 SSVGDSVF-FDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALG 102
V +SVF F S + AD L + +++ I GHAD+ G + + A+
Sbjct: 186 EDVKESVFHFGVDSKLLSDADKVQLRRIAQYVDADVQIDAIKIIGHADDSGRKGYNNAIS 245
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA +V NY + G+ ++ +T G P ++ A NRR +V L
Sbjct: 246 QYRAESVKNYLIRLGVPQRKLSITWVGALQPIARNDTDEGRAANRRVVVTL 296
>gi|89094844|ref|ZP_01167777.1| peptidoglycan-associated lipoprotein precursor [Oceanospirillum sp.
MED92]
gi|89080899|gb|EAR60138.1| peptidoglycan-associated lipoprotein precursor [Oceanospirillum sp.
MED92]
Length = 171
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 71/163 (43%), Gaps = 12/163 (7%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDS---------- 51
+ + ++ ++ +T+ + ++ + V S
Sbjct: 5 NVTKAVALALSVAWVAGCSTGGSNTEGGANTGTDTGTTQGVGQGNGVSGSSMSDVANLQT 64
Query: 52 -VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
+FD ++ A L ++ ++EGHADE G+R +IALG RRA AV
Sbjct: 65 VFYFDFDKSVVKAAGFADLEKHAAYLSANPSAQVVLEGHADERGTREYNIALGERRAKAV 124
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ G S S+++ S+G+E P+V GH E ++++NRR +
Sbjct: 125 ARFLQVNGASGSQIETVSFGEEKPAVLGHSEASWSQNRRVELK 167
>gi|229895607|ref|ZP_04510778.1| putative OMPA family outer membrane porin precursor [Yersinia
pestis Pestoides A]
gi|229701413|gb|EEO89441.1| putative OMPA family outer membrane porin precursor [Yersinia
pestis Pestoides A]
Length = 560
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 4/112 (3%)
Query: 53 FFDTSSYSIRPADIQVLSN---LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
FD++S ++ L + LI GH+D GS + ++AL +RA A+
Sbjct: 441 LFDSNSTKLKLNSQTNEMMMELLSLVERNKEKKILIVGHSDNTGSSSMNMALSEQRALAL 500
Query: 110 FNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
++ + R G P H E +NRR V + + T
Sbjct: 501 RDWLIKRSDITVDNFITKGMGASEPVATNHTEAGREQNRRVEVLILPTQDRT 552
>gi|255622212|ref|XP_002540262.1| conserved hypothetical protein [Ricinus communis]
gi|223497476|gb|EEF22121.1| conserved hypothetical protein [Ricinus communis]
Length = 160
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 46/124 (37%), Gaps = 3/124 (2%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHAD 90
+ + QE+ + + F +S I P L + +++ I GH D
Sbjct: 30 EGEAFKPKTQEKATMKFTPRILFQANSAIILPESYADLDIVYDVVKEWGNDKVEIAGHTD 89
Query: 91 ELGSRNSSIAL--GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
+ + L +RA AV +Y V +G+ A R+ V YG P NRR
Sbjct: 90 KRNTSKEKYNLVLSEKRAKAVADYLVKKGMDAQRLVVKGYGFSQPIAENDPVSGNDANRR 149
Query: 149 AIVF 152
V
Sbjct: 150 VEVI 153
>gi|220905238|ref|YP_002480550.1| OmpA/MotB domain-containing protein [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219869537|gb|ACL49872.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 331
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 2/111 (1%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIA 100
+ V V F +SY++ + +L+ ++ + ++ G D +GS ++
Sbjct: 219 QDEDVIVLRGVHFAFNSYALDGKAMGILNEAAGLIKANPNKRVVLAGWTDWIGSDAYNMK 278
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
L RA +V NY V +GI ASRM GK + A NRR +
Sbjct: 279 LSQERANSVKNYLVKQGIPASRMTAIGRGKSF-KYNNETAEGRAMNRRTEI 328
>gi|157737823|ref|YP_001490507.1| OmpA/MotB precursor [Arcobacter butzleri RM4018]
gi|315637613|ref|ZP_07892819.1| lipoprotein [Arcobacter butzleri JV22]
gi|157699677|gb|ABV67837.1| OmpA/MotB precursor [Arcobacter butzleri RM4018]
gi|315478067|gb|EFU68794.1| lipoprotein [Arcobacter butzleri JV22]
Length = 174
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/171 (19%), Positives = 70/171 (40%), Gaps = 23/171 (13%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSS------------- 47
M+ ++ +L + ++ +G + + + + +S++
Sbjct: 1 MKKLGLYSVLVS-ALLFTTGCSEKNADVDNVVGANDAASVEAPIQDGTLLEKASNGNYYM 59
Query: 48 ------VGDSVFFDTSSYSIRPADIQVLSNLGSWLE--KHDCDFLIEGHADELGSRNSSI 99
+ + V+F Y++ + + S L D + G+ DE GS +
Sbjct: 60 INGQRVLIEHVYFGFDKYNLTADNKSKAVSNASKLSAVSSDTTVKVLGNTDEWGSDEYNY 119
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
ALGL+RA AV + VA G++ + + + S G+ P +D +A+NRR
Sbjct: 120 ALGLKRANAVKDVLVANGVT-TNISLVSLGESNPVCTEKTKDCWAQNRRVE 169
>gi|156976618|ref|YP_001447524.1| hypothetical protein VIBHAR_05392 [Vibrio harveyi ATCC BAA-1116]
gi|156528212|gb|ABU73297.1| hypothetical protein VIBHAR_05392 [Vibrio harveyi ATCC BAA-1116]
Length = 207
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 1/118 (0%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSR 95
E+ E + + V F T S + + +LG +L + D D +I+GHAD G+
Sbjct: 86 ETISGEHLMIRLKEQVHFQTGSARLLAQSQDWIQSLGHYLAGRTDVDVVIDGHADSTGAA 145
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ + +L +RA V +A + R+ +G+ +P A NRR + L
Sbjct: 146 SFNDSLSEKRAREVEKQLLATSLPRQRVFSRGFGEYVPQCSNATASGKACNRRVELML 203
>gi|86146732|ref|ZP_01065053.1| putative protein F-related protein [Vibrio sp. MED222]
gi|85835579|gb|EAQ53716.1| putative protein F-related protein [Vibrio sp. MED222]
Length = 197
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 1/111 (0%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALG 102
+ V F T S S PA L LGS+ + D D +IEGH D GS + L
Sbjct: 83 VMVKLVQHVNFKTGSTSPEPAYNNWLDTLGSYLSRRQDIDVVIEGHTDNTGSDRVNDPLS 142
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+RA V + +S+ + +G+ +P+ A NRR + L
Sbjct: 143 EQRAKEVKARLESNYVSSRAIYTRGFGEYVPACNNASAQGKACNRRVELML 193
>gi|332665133|ref|YP_004447921.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332333947|gb|AEE51048.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 143
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 38/103 (36%), Gaps = 1/103 (0%)
Query: 52 VFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
++F S+ I I L L E D I GH D +G + L R+
Sbjct: 36 IYFGGGSHYIDQEQIDALYKWLDGIPEVDSHDISIHGHTDNIGGAEYNQWLSQMRSDNTL 95
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V +G+ + + +G+ P + KNRR + +
Sbjct: 96 QKLVDKGLRTEMISIRDFGQFNPLFDNSTWEGRRKNRRVDIIV 138
>gi|226229138|ref|YP_002763244.1| hypothetical protein GAU_3732 [Gemmatimonas aurantiaca T-27]
gi|226092329|dbj|BAH40774.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
Length = 457
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
++FDT IRP L + + E D +IEGH D +G+ +++AL RRA A
Sbjct: 351 QGIYFDTGKDVIRPESTPTLKEIAAMLSEHADLQLIIEGHTDNVGAAPANLALSQRRADA 410
Query: 109 VFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
V + V+ GI R+ G+ +P+ + +NRR +
Sbjct: 411 VRSALVSDYGIDGGRLTAKGLGQTVPATANTTPEGRQQNRRVELV 455
>gi|198245916|ref|YP_002214234.1| hypothetical protein SeD_A0303 [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|197940432|gb|ACH77765.1| SciP protein [Salmonella enterica subsp. enterica serovar Dublin
str. CT_02021853]
gi|326621978|gb|EGE28323.1| SciP protein [Salmonella enterica subsp. enterica serovar Dublin
str. 3246]
Length = 434
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 40/123 (32%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
L + F ++ A V++ + + + GH D
Sbjct: 310 LTVDEDDQHSRVVFRGDAMFVPGQKTVSDAIRPVINKAAREIARVGGAVTVTGHTDSQPI 369
Query: 95 RNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
++ L +RA V + G+ A R+ + G +P + AKNRR
Sbjct: 370 HSAEFPSNLVLSEKRAAEVAALLTSGGVPAGRVHIVGKGDTVPVADNGSKAGRAKNRRVE 429
Query: 151 VFL 153
+ +
Sbjct: 430 ILV 432
>gi|144900280|emb|CAM77144.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Magnetospirillum gryphiswaldense MSR-1]
Length = 319
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
VFFD + I P +V++ + + + + GHAD G ++AL L+RA AV
Sbjct: 215 IVFFDFNKSDITPEASKVITQAVDTAKKGKTTRVDLTGHADRSGPDKYNMALSLKRANAV 274
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V +GI A ++ V G+ +P V D +NRR + L
Sbjct: 275 KAAMVKQGIPADQISVVGKGEAVPLVQTPDGVREPQNRRVEIVL 318
>gi|16763665|ref|NP_459280.1| hypothetical protein STM0282 [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|56414595|ref|YP_151670.1| hypothetical protein SPA2482 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|168238628|ref|ZP_02663686.1| SciP protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|168261319|ref|ZP_02683292.1| SciP protein [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|168465340|ref|ZP_02699222.1| SciP protein [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|168819144|ref|ZP_02831144.1| SciP protein [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|194736479|ref|YP_002113300.1| hypothetical protein SeSA_A0314 [Salmonella enterica subsp.
enterica serovar Schwarzengrund str. CVM19633]
gi|197262114|ref|ZP_03162188.1| SciP protein [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|197363525|ref|YP_002143162.1| hypothetical protein SSPA2317 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|238913699|ref|ZP_04657536.1| hypothetical protein SentesTe_21562 [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|15130931|emb|CAC48213.1| SciP protein [Salmonella enterica subsp. enterica serovar
Typhimurium]
gi|16418782|gb|AAL19239.1| putative outer membrane protein, OmpA family [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|56128852|gb|AAV78358.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|194711981|gb|ACF91202.1| SciP protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|195631766|gb|EDX50286.1| SciP protein [Salmonella enterica subsp. enterica serovar Newport
str. SL317]
gi|197095002|emb|CAR60547.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197240369|gb|EDY22989.1| SciP protein [Salmonella enterica subsp. enterica serovar Saintpaul
str. SARA23]
gi|197288542|gb|EDY27919.1| SciP protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|205344023|gb|EDZ30787.1| SciP protein [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205350071|gb|EDZ36702.1| SciP protein [Salmonella enterica subsp. enterica serovar Hadar
str. RI_05P066]
gi|261245507|emb|CBG23297.1| putative type VI system protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|267991971|gb|ACY86856.1| hypothetical protein STM14_0330 [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301156902|emb|CBW16378.1| putative membrane protein (SPI-6 associated) [Salmonella enterica
subsp. enterica serovar Typhimurium str. SL1344]
gi|312911246|dbj|BAJ35220.1| hypothetical protein STMDT12_C02770 [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|320084532|emb|CBY94324.1| Uncharacterized 24.6 kDa protein in ccpA 3'region ORF2 [Salmonella
enterica subsp. enterica serovar Weltevreden str.
2007-60-3289-1]
gi|321224938|gb|EFX49999.1| Outer membrane protein ImpK/VasF, OmpA/MotB [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
gi|323128597|gb|ADX16027.1| Putative outer membrane protein, OmpA family [Salmonella enterica
subsp. enterica serovar Typhimurium str. 4/74]
gi|332987228|gb|AEF06211.1| hypothetical protein STMUK_0285 [Salmonella enterica subsp.
enterica serovar Typhimurium str. UK-1]
Length = 434
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 40/123 (32%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
L + F ++ A V++ + + + GH D
Sbjct: 310 LTVDEDDQHSRVVFRGDAMFVPGQKTVSDAIRPVINKAAREIARVGGAVTVTGHTDSQPI 369
Query: 95 RNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
++ L +RA V + G+ A R+ + G +P + AKNRR
Sbjct: 370 HSAEFPSNLVLSEKRAAEVAALLTSGGVPAGRVHIVGKGDTVPVADNGSKAGRAKNRRVE 429
Query: 151 VFL 153
+ +
Sbjct: 430 ILV 432
>gi|262039986|ref|ZP_06013251.1| outer membrane protein A [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259042654|gb|EEW43660.1| outer membrane protein A [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 364
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L L + ++ D ++ G+ D +GS + L
Sbjct: 234 TLKSDVLFNFNKATLKPEGQQALDQLYTQLSNIDPKDGSAVVLGYTDRIGSEAYNQQLSE 293
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
+RA +V +Y VA+GI A ++ G+ P + A A +RR + +K
Sbjct: 294 KRAQSVVDYLVAKGIPAGKISARGMGESNPVTGNTCDNVKARAALIDCLAPDRRVEIEVK 353
Query: 155 GCR 157
G +
Sbjct: 354 GYK 356
>gi|242240116|ref|YP_002988297.1| outer membrane protein A [Dickeya dadantii Ech703]
gi|242132173|gb|ACS86475.1| OmpA domain protein transmembrane region-containing protein
[Dickeya dadantii Ech703]
Length = 354
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPA---DIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P + L S ++ D ++ G D LGS + L
Sbjct: 224 TLKSDVLFNFNKATLKPEGQRSLDQLYTQLSTIDPKDGSVVVLGFTDRLGSDQYNQTLST 283
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
+RA +V +Y V +G+ A+++ GK P + A A +RR + +K
Sbjct: 284 KRAQSVVDYLVHKGVPANKISARGMGKANPVSGATCANVKARAALIDCLAPDRRVEIEVK 343
Query: 155 GCR 157
G +
Sbjct: 344 GIK 346
>gi|83814332|ref|YP_446691.1| chemotaxis protein [Salinibacter ruber DSM 13855]
gi|83755726|gb|ABC43839.1| probable chemotaxis protein [Salinibacter ruber DSM 13855]
Length = 241
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 43/117 (36%), Gaps = 6/117 (5%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RN 96
+E + DS+ F T + VL L + L + ++ GH D+
Sbjct: 99 KEGIHVVIADSLMFRTGRARLLKPSRTVLRELANLLSRDVGSVVVSGHTDDRPIGTRKFP 158
Query: 97 SSIALGLRRAYAVFNYFVAR--GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
S+ L RA + + R +SR + + P ++ AKNRR +
Sbjct: 159 SNWELSTARAASAVRFLQERAPEYDSSRFQAVGHASTDPRASNQTDEGRAKNRRVEI 215
>gi|15605330|ref|NP_220116.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis
D/UW-3/CX]
gi|76789338|ref|YP_328424.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis
A/HAR-13]
gi|166154814|ref|YP_001654932.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis 434/Bu]
gi|166155689|ref|YP_001653944.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|237803028|ref|YP_002888222.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis
B/Jali20/OT]
gi|237804949|ref|YP_002889103.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis
B/TZ1A828/OT]
gi|255311421|ref|ZP_05353991.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis 6276]
gi|255317722|ref|ZP_05358968.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis 6276s]
gi|255348981|ref|ZP_05380988.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis 70]
gi|255503520|ref|ZP_05381910.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis 70s]
gi|255507198|ref|ZP_05382837.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis
D(s)2923]
gi|301336092|ref|ZP_07224336.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis L2tet1]
gi|3329044|gb|AAC68202.1| Peptidoglycan-Associated Lipoprotein [Chlamydia trachomatis
D/UW-3/CX]
gi|76167868|gb|AAX50876.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis
A/HAR-13]
gi|165930802|emb|CAP04300.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis 434/Bu]
gi|165931677|emb|CAP07254.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|231273249|emb|CAX10164.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis
B/TZ1A828/OT]
gi|231274262|emb|CAX11057.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis
B/Jali20/OT]
gi|289525642|emb|CBJ15123.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis
Sweden2]
gi|296435206|gb|ADH17384.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis E/150]
gi|296436135|gb|ADH18309.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis G/9768]
gi|296437063|gb|ADH19233.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis
G/11222]
gi|296437995|gb|ADH20156.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis
G/11074]
gi|296438925|gb|ADH21078.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis
E/11023]
gi|297140497|gb|ADH97255.1| peptidoglycan-associated lipoprotein [Chlamydia trachomatis G/9301]
Length = 188
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 41/106 (38%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Query: 50 DSVFFDTSSYSIRPADIQVL--SNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++ F T SYSI+ D + S + + IEGH DE G+ ++ALG RRA
Sbjct: 80 RNITFATDSYSIKGEDNLTILASLVRHLHKSPKATLYIEGHTDERGAAAYNLALGARRAN 139
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV Y + +GI+A R+ SYGKE P GH+E A+ +NRR +
Sbjct: 140 AVKQYLIKQGIAADRLFTISYGKEHPVHPGHNELAWQQNRRTEFKI 185
>gi|239934074|ref|ZP_04691027.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
Length = 205
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 43/122 (35%), Gaps = 2/122 (1%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHAD 90
D + + + + +V F S + + ++ + +E+ + G D
Sbjct: 73 DGAERRTDTNTEVTYELQAAVLFAKDSGRLSDSARSRIAAIAREIEQRAATRVRVTGFTD 132
Query: 91 ELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
LGS L +RA AV + A + +G+ P E + +NRR
Sbjct: 133 NLGSSVHGDILSTQRADAVRDVLTDDLRSEAVTFETHGFGERRPVASNATEASRRENRRV 192
Query: 150 IV 151
+
Sbjct: 193 EI 194
>gi|124002746|ref|ZP_01687598.1| OmpA family protein [Microscilla marina ATCC 23134]
gi|123991974|gb|EAY31361.1| OmpA family protein [Microscilla marina ATCC 23134]
Length = 775
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAV 109
++F S I L L ++LE + + G++DELGS+ ++ L RA AV
Sbjct: 669 RIYFKFGSRKIEKYCHPSLDKLVNFLETNPKVKVELAGYSDELGSKKGNVGLSEDRAKAV 728
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+Y + +GI SR+ YGK P + NRR + G
Sbjct: 729 VDYLIEKGIDFSRLTYKGYGKVSPKHPNKTKHGRILNRRVECKVVG 774
>gi|153947393|ref|YP_001400334.1| OmpA domain-containing protein [Yersinia pseudotuberculosis IP
31758]
gi|170023708|ref|YP_001720213.1| OmpA/MotB domain-containing protein [Yersinia pseudotuberculosis
YPIII]
gi|152958888|gb|ABS46349.1| OmpA domain protein [Yersinia pseudotuberculosis IP 31758]
gi|169750242|gb|ACA67760.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis YPIII]
Length = 560
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 4/112 (3%)
Query: 53 FFDTSSYSIRPADIQVLSN---LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
FD++S ++ L + LI GH+D GS + ++ L +RA A+
Sbjct: 441 LFDSNSTKLKLNSQTNEMMMELLSLVEQNKGKKILIVGHSDNTGSSSMNMTLSEQRALAL 500
Query: 110 FNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
++ + R G P H E +NRR V + + T
Sbjct: 501 RDWLIKRSDITVDNFITKGMGASEPVATNHTEAGREQNRRVEVLILPTQDRT 552
>gi|197123809|ref|YP_002135760.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K]
gi|196173658|gb|ACG74631.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K]
Length = 242
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 2/124 (1%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
E+S+ + + SV F ++ P Q L L L++ L++G+ D
Sbjct: 119 AAAAPEASVPPECADVTAFSVHFAFDRSNLTPESQQNLQKLADCLKQAPAKRVLVQGNCD 178
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
E G+ ++ALG RRA + Y G+ ++ + SYG+E P E ++KNRR
Sbjct: 179 ERGTAQYNVALGNRRAESAKKYLTDLGV-STSVDTVSYGEEKPVCSEATEACWSKNRRDD 237
Query: 151 VFLK 154
++
Sbjct: 238 FQIE 241
>gi|16759268|ref|NP_454885.1| hypothetical protein STY0305 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29142957|ref|NP_806299.1| hypothetical protein t2581 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|213052080|ref|ZP_03344958.1| hypothetical protein Salmoneentericaenterica_03522 [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
gi|213428430|ref|ZP_03361180.1| hypothetical protein SentesTyphi_24568 [Salmonella enterica subsp.
enterica serovar Typhi str. E02-1180]
gi|289805848|ref|ZP_06536477.1| hypothetical protein Salmonellaentericaenterica_15952 [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
gi|25513281|pir||AI0536 probable membrane protein STY0305 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16501559|emb|CAD08737.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29138589|gb|AAO70159.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|329805048|gb|AEC05360.1| putative membrane protein [Salmonella enterica]
Length = 433
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 40/123 (32%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
L + F ++ A V++ + + + GH D
Sbjct: 309 LTVDEDDQHSRVVFRGDAMFVPGQKTVSDAIRPVINKAAREIARVGGAVTVTGHTDSQPI 368
Query: 95 RNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
++ L +RA V + G+ A R+ + G +P + AKNRR
Sbjct: 369 HSAEFPSNLVLSEKRAAEVAALLTSGGVPAGRVHIVGKGDTVPVADNGSKAGRAKNRRVE 428
Query: 151 VFL 153
+ +
Sbjct: 429 ILV 431
>gi|107024169|ref|YP_622496.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
gi|116688504|ref|YP_834127.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
HI2424]
gi|105894358|gb|ABF77523.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
gi|116646593|gb|ABK07234.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424]
Length = 85
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 36/83 (43%)
Query: 71 NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
+ + + I GH D G+R S+IAL RA AV Y + + I +M T G
Sbjct: 1 MAAALAKMQNRTVDIIGHTDNSGNRTSNIALSQARADAVKGYLITKSIPPQQMTTTGVGP 60
Query: 131 EMPSVYGHDEDAYAKNRRAIVFL 153
+ P D A+NRR +
Sbjct: 61 DQPIAPNDTADGRARNRRIEFRV 83
>gi|332993882|gb|AEF03937.1| peptidoglycan-associated lipoprotein [Alteromonas sp. SN2]
Length = 188
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 32/186 (17%)
Query: 1 MQY--STIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG--------- 49
M + I+L +TMM+ S + + + + + E + EQ +
Sbjct: 3 MNKLMKSFIIVLPVVTMMACSSGPSEEELAAERNRLAQEQAQAEQDARQAEAQRVEAEAA 62
Query: 50 --------------------DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGH 88
+V+FD SI+P ++L ++ ++ IEGH
Sbjct: 63 QRMKRSEEMVQQEMEALKNEQTVYFDFDRASIKPEFQRLLDKHAAFLVKNPSTKVTIEGH 122
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D G+ +IALG RRA +V Y + G+S+S++ V SYG+E +V G E A+A+NRR
Sbjct: 123 TDSRGTPEYNIALGERRAQSVETYLMNAGVSSSQITVVSYGEEKSAVMGSTEYAFAQNRR 182
Query: 149 AIVFLK 154
+V +
Sbjct: 183 GVVVYR 188
>gi|307565706|ref|ZP_07628175.1| OmpA family protein [Prevotella amnii CRIS 21A-A]
gi|307345532|gb|EFN90900.1| OmpA family protein [Prevotella amnii CRIS 21A-A]
Length = 286
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADE---------LGSR 95
S+ D++ + + SY I Q LS + ++ ++ D LIEG+ D + +
Sbjct: 147 ISLADNMLYKSGSYEINSRAEQTLSKIAKIIMDYNNYDVLIEGNTDNVPINTTNKIMANI 206
Query: 96 NSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L RA +V NY R + SR+ G+ P V E +NRR + +
Sbjct: 207 RNNWDLSALRATSVANYLQTRFGVDPSRITAGGRGEYNPIVGNDTELGRQRNRRTQIII 265
>gi|304410057|ref|ZP_07391676.1| OmpA/MotB domain protein [Shewanella baltica OS183]
gi|307302230|ref|ZP_07581988.1| OmpA/MotB domain protein [Shewanella baltica BA175]
gi|304351466|gb|EFM15865.1| OmpA/MotB domain protein [Shewanella baltica OS183]
gi|306914268|gb|EFN44689.1| OmpA/MotB domain protein [Shewanella baltica BA175]
Length = 196
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 54/139 (38%), Gaps = 6/139 (4%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
+ + + + S+P+ + + V+F+ + + + + L+ + ++
Sbjct: 60 VEVEATASANCSTSNPNAEFSADCHNISTAV-----VYFEFAIAEVDFSQWKTLALVKAY 114
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPS 134
L +D + GH D +G+ + L L+RA V V G + +R V G P
Sbjct: 115 LAANDVALTLVGHTDIVGTPEFNYQLSLQRAQNVKRILVEDYGFNPNRFTVMGKGISEPV 174
Query: 135 VYGHDEDAYAKNRRAIVFL 153
+ + NRR +
Sbjct: 175 ADNRSSEGRSLNRRVQFIV 193
>gi|300819200|ref|ZP_07099401.1| outer membrane protein A [Escherichia coli MS 107-1]
gi|300528219|gb|EFK49281.1| outer membrane protein A [Escherichia coli MS 107-1]
Length = 353
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P L L S L + D ++ G+ D +GS + L
Sbjct: 223 TLKSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSE 282
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RRA +V +Y +++GI A ++ G+ P + A +RR + +K
Sbjct: 283 RRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVK 342
Query: 155 GCR 157
G +
Sbjct: 343 GIK 345
>gi|256424251|ref|YP_003124904.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
gi|256039159|gb|ACU62703.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
Length = 613
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 7/140 (5%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ I +PD + + S + D ++FD + +I PA QVL L ++++
Sbjct: 472 TVAAPVVAIQTPDPAPVATPSADPDKSGLLD-IYFDFNKAAINPAAAQVLDGLVKTIQEN 530
Query: 80 DCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV--- 135
+ H D G+ ++AL +RA +V NY +++G++ SR+ YG+
Sbjct: 531 PDKSVELSAHTDSRGNDAFNLALSQKRATSVMNYLISKGVAKSRISAKGYGETKLLNRCG 590
Query: 136 --YGHDEDAYAKNRRAIVFL 153
ED + NRR L
Sbjct: 591 NGVNCSEDEHKLNRRTEFKL 610
>gi|288573018|ref|ZP_06391375.1| OmpA/MotB domain protein [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288568759|gb|EFC90316.1| OmpA/MotB domain protein [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 240
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 53/132 (40%), Gaps = 5/132 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
K + ++ Q + S+ D + F IRP ++L+ LG +L+ +E
Sbjct: 102 KDQEMEQDVSVIVDQRGVTVSLSDQLLFPLGGVDIRPEGKRLLAKLGEFLKGRIPALAVE 161
Query: 87 GHADELG----SRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDED 141
GH D+ + L RA V +Y V + + + YG P V ++
Sbjct: 162 GHTDDRPLRGGPYRDNWGLSAIRAAIVASYLVDAAGISPSIVQAVGYGPFRPVVPNDSDE 221
Query: 142 AYAKNRRAIVFL 153
++NRR + +
Sbjct: 222 NRSRNRRVDLVI 233
>gi|170020642|ref|YP_001725596.1| outer membrane protein A [Escherichia coli ATCC 8739]
gi|256023341|ref|ZP_05437206.1| outer membrane protein A [Escherichia sp. 4_1_40B]
gi|307137587|ref|ZP_07496943.1| outer membrane protein A [Escherichia coli H736]
gi|169755570|gb|ACA78269.1| OmpA domain protein transmembrane region-containing protein
[Escherichia coli ATCC 8739]
gi|320637825|gb|EFX07617.1| outer membrane protein A [Escherichia coli O157:H7 str. G5101]
gi|320642950|gb|EFX12151.1| outer membrane protein A [Escherichia coli O157:H- str. 493-89]
gi|320653723|gb|EFX21797.1| outer membrane protein A [Escherichia coli O55:H7 str. 3256-97 TW
07815]
Length = 365
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P L L S L + D ++ G+ D +GS + L
Sbjct: 235 TLKSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSE 294
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RRA +V +Y +++GI A ++ G+ P + A +RR + +K
Sbjct: 295 RRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVK 354
Query: 155 GCR 157
G +
Sbjct: 355 GIK 357
>gi|90023231|ref|YP_529058.1| HAD family hydrolase [Saccharophagus degradans 2-40]
gi|89952831|gb|ABD82846.1| OmpA/MotB [Saccharophagus degradans 2-40]
Length = 380
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 55/137 (40%), Gaps = 2/137 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
D+ +Q S S+ V FD++S ++P + + ++ +++
Sbjct: 237 DSCPNTAMHLKVDAKGCPVQLSESVSIDLKVNFDSNSSVVKPEYFAEIRKVADFMAQYEN 296
Query: 82 DFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHD 139
+ IEGH D G+ + +L +RA AV V+ A R+ YG+E P
Sbjct: 297 SVVVIEGHTDTRGAAAYNKSLSQKRADAVAAVLVSEMNVAKRRVTSVGYGEEQPIADEST 356
Query: 140 EDAYAKNRRAIVFLKGC 156
+ NRR + +
Sbjct: 357 REGLVANRRVVAKVSAS 373
>gi|50956519|gb|AAT90766.1| conserved hypothetical protein [uncultured proteobacterium QS1]
Length = 372
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 49/154 (31%), Gaps = 9/154 (5%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSI 61
+ I + L A+ + S + + S FD S +
Sbjct: 214 RKRRIALWLFAVAVTIALACGIGWFIASQQQPTGADPVQLDSLS-------LFDAGSTEL 266
Query: 62 RPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA 120
+P +VL N L + + I GH D G+ ++ + RA AV ++ G
Sbjct: 267 KPGSTKVLINALANIKAQSGWLIEIVGHTDTTGNAEQNLQISYARASAVRDWMQRMGDIP 326
Query: 121 -SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ V P A NRR + L
Sbjct: 327 SNCFVVQGAAGSQPITSNDTASGRAANRRVDIRL 360
>gi|88704266|ref|ZP_01101980.1| motB family protein [Congregibacter litoralis KT71]
gi|88701317|gb|EAQ98422.1| motB family protein [Congregibacter litoralis KT71]
Length = 286
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 51/151 (33%), Gaps = 9/151 (5%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVF----FDTSSYSIRPADIQV 68
+++ + D K D V E ++ + F + S ++ + V
Sbjct: 108 TALLAETEADADKLKDMLEDEVQTGKVDVESDGRTITVRIREQGSFPSGSATLNTDFVPV 167
Query: 69 LSNLGSWLEKHDCDFLIEGHADELG----SRNSSIALGLRRAYAV-FNYFVARGISASRM 123
++ + L + IEGH D S+ L RA +V + RM
Sbjct: 168 MARIREALTEIPGTISIEGHTDSTPLRGGRYESNWGLSSSRALSVTHELLREGLLKDDRM 227
Query: 124 KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
V + P + + A NRR + ++
Sbjct: 228 MVVGFADTRPFTFNDTVEGRASNRRVEIVIR 258
>gi|22125427|ref|NP_668850.1| hypothetical protein y1530 [Yersinia pestis KIM 10]
gi|45442357|ref|NP_993896.1| hypothetical protein YP_2580 [Yersinia pestis biovar Microtus str.
91001]
gi|108808138|ref|YP_652054.1| hypothetical protein YPA_2144 [Yersinia pestis Antiqua]
gi|108811590|ref|YP_647357.1| hypothetical protein YPN_1427 [Yersinia pestis Nepal516]
gi|145599338|ref|YP_001163414.1| hypothetical protein YPDSF_2062 [Yersinia pestis Pestoides F]
gi|149365180|ref|ZP_01887215.1| putative membrane protein [Yersinia pestis CA88-4125]
gi|162421467|ref|YP_001607103.1| OmpA domain-containing protein [Yersinia pestis Angola]
gi|165926917|ref|ZP_02222749.1| OmpA domain protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165939224|ref|ZP_02227774.1| OmpA domain protein [Yersinia pestis biovar Orientalis str. IP275]
gi|166011145|ref|ZP_02232043.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166212522|ref|ZP_02238557.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|167398614|ref|ZP_02304138.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167421232|ref|ZP_02312985.1| OmpA domain protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167424634|ref|ZP_02316387.1| OmpA domain protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|167467871|ref|ZP_02332575.1| OmpA domain protein [Yersinia pestis FV-1]
gi|218930004|ref|YP_002347879.1| hypothetical protein YPO2953 [Yersinia pestis CO92]
gi|229838541|ref|ZP_04458700.1| putative OMPA family outer membrane porin precursor [Yersinia
pestis biovar Orientalis str. PEXU2]
gi|229899106|ref|ZP_04514249.1| putative OMPA family outer membrane porin precursor [Yersinia
pestis biovar Orientalis str. India 195]
gi|229901867|ref|ZP_04516988.1| putative OMPA family outer membrane porin precursor [Yersinia
pestis Nepal516]
gi|270490053|ref|ZP_06207127.1| OmpA family protein [Yersinia pestis KIM D27]
gi|294504711|ref|YP_003568773.1| hypothetical protein YPZ3_2601 [Yersinia pestis Z176003]
gi|21958316|gb|AAM85101.1|AE013756_2 hypothetical [Yersinia pestis KIM 10]
gi|45437221|gb|AAS62773.1| putative membrane protein [Yersinia pestis biovar Microtus str.
91001]
gi|108775238|gb|ABG17757.1| membrane protein [Yersinia pestis Nepal516]
gi|108780051|gb|ABG14109.1| putative membrane protein [Yersinia pestis Antiqua]
gi|115348615|emb|CAL21559.1| putative membrane protein [Yersinia pestis CO92]
gi|145211034|gb|ABP40441.1| membrane protein [Yersinia pestis Pestoides F]
gi|149291593|gb|EDM41667.1| putative membrane protein [Yersinia pestis CA88-4125]
gi|162354282|gb|ABX88230.1| OmpA domain protein [Yersinia pestis Angola]
gi|165912824|gb|EDR31451.1| OmpA domain protein [Yersinia pestis biovar Orientalis str. IP275]
gi|165921268|gb|EDR38492.1| OmpA domain protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165989823|gb|EDR42124.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166206453|gb|EDR50933.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|166960721|gb|EDR56742.1| OmpA domain protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167051118|gb|EDR62526.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167056516|gb|EDR66285.1| OmpA domain protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229680763|gb|EEO76858.1| putative OMPA family outer membrane porin precursor [Yersinia
pestis Nepal516]
gi|229687508|gb|EEO79581.1| putative OMPA family outer membrane porin precursor [Yersinia
pestis biovar Orientalis str. India 195]
gi|229694907|gb|EEO84954.1| putative OMPA family outer membrane porin precursor [Yersinia
pestis biovar Orientalis str. PEXU2]
gi|262362773|gb|ACY59494.1| hypothetical protein YPD4_2587 [Yersinia pestis D106004]
gi|262366698|gb|ACY63255.1| hypothetical protein YPD8_2582 [Yersinia pestis D182038]
gi|270338557|gb|EFA49334.1| OmpA family protein [Yersinia pestis KIM D27]
gi|294355170|gb|ADE65511.1| hypothetical protein YPZ3_2601 [Yersinia pestis Z176003]
gi|320014496|gb|ADV98067.1| putative OMPA family outer membrane porinprecursor [Yersinia pestis
biovar Medievalis str. Harbin 35]
Length = 560
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 4/112 (3%)
Query: 53 FFDTSSYSIRPADIQVLSN---LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
FD++S ++ L + LI GH+D GS + ++AL +RA A+
Sbjct: 441 LFDSNSTKLKLNSQTNEMMMELLSLVERNKEKKILIVGHSDNTGSSSMNMALSEQRALAL 500
Query: 110 FNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
++ + R G P H E +NRR V + + T
Sbjct: 501 RDWLIKRSDITVDNFITKGMGASEPVATNHTEAGREQNRRVEVLILPTQDRT 552
>gi|331641486|ref|ZP_08342621.1| outer membrane protein A [Escherichia coli H736]
gi|331038284|gb|EGI10504.1| outer membrane protein A [Escherichia coli H736]
Length = 370
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P L L S L + D ++ G+ D +GS + L
Sbjct: 240 TLKSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSE 299
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RRA +V +Y +++GI A ++ G+ P + A +RR + +K
Sbjct: 300 RRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVK 359
Query: 155 GCR 157
G +
Sbjct: 360 GIK 362
>gi|303325924|ref|ZP_07356367.1| putative chemotaxis MotB protein [Desulfovibrio sp. 3_1_syn3]
gi|302863840|gb|EFL86771.1| putative chemotaxis MotB protein [Desulfovibrio sp. 3_1_syn3]
Length = 235
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 3/129 (2%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ P + S+ V V F S P +VL ++ L++++ ++
Sbjct: 94 ADAVPQSSSGISADDVGVQLRVNSDVMFKAGSVDFLPEGEKVLGSVLQILKEYNLYLVVR 153
Query: 87 GHADE---LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
GHAD S+ L RA AV +Y G+ +R++ +YG P G DE++
Sbjct: 154 GHADSTEARPPYASAWELSGARAAAVLHYLADHGVKPTRLRGVAYGDTRPLKPGIDEESR 213
Query: 144 AKNRRAIVF 152
A NRR F
Sbjct: 214 AVNRRVEFF 222
>gi|297748730|gb|ADI51276.1| Peptidoglycan-associated lipoprotein [Chlamydia trachomatis D-EC]
gi|297749610|gb|ADI52288.1| Peptidoglycan-associated lipoprotein [Chlamydia trachomatis D-LC]
Length = 202
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 41/106 (38%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Query: 50 DSVFFDTSSYSIRPADIQVL--SNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++ F T SYSI+ D + S + + IEGH DE G+ ++ALG RRA
Sbjct: 94 RNITFATDSYSIKGEDNLTILASLVRHLHKSPKATLYIEGHTDERGAAAYNLALGARRAN 153
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV Y + +GI+A R+ SYGKE P GH+E A+ +NRR +
Sbjct: 154 AVKQYLIKQGIAADRLFTISYGKEHPVHPGHNELAWQQNRRTEFKI 199
>gi|58582454|ref|YP_201470.1| flagellar motor protein MotD [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|58427048|gb|AAW76085.1| MotB protein [Xanthomonas oryzae pv. oryzae KACC10331]
Length = 286
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 45/121 (37%), Gaps = 4/121 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ + F T S ++ LS L S L + +EG+ D S+
Sbjct: 158 IEVEINSDILFGTGSAALAGNARTTLSTLASVLREAPNGVRVEGYTDNQPIATAQFPSNW 217
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
L RA +V + F G++ R+ + YG+ E NRR ++ + A
Sbjct: 218 ELSAARAASVVHLFADDGVAPQRLAMVGYGEFRARADNSTEAGRNANRRVVLIILADSAG 277
Query: 160 T 160
+
Sbjct: 278 S 278
>gi|284097464|ref|ZP_06385561.1| conserved hypothetical protein [Candidatus Poribacteria sp. WGA-A3]
gi|283831026|gb|EFC35039.1| conserved hypothetical protein [Candidatus Poribacteria sp. WGA-A3]
Length = 148
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/100 (40%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYA 108
VFF Y+IR + VL L+ D LIEGH DE G+ ++ LG RRA A
Sbjct: 43 DVFFGYDQYAIRSDAVPVLEEDAELLKSTYKDSAVLIEGHCDERGTVEYNLELGKRRAQA 102
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
V +Y V GI SR+++ SYGKE P + + +NRR
Sbjct: 103 VKDYLVDLGIEESRIRIVSYGKERPFCTESEPSCWRQNRR 142
>gi|254453865|ref|ZP_05067302.1| OmpA domain protein [Octadecabacter antarcticus 238]
gi|198268271|gb|EDY92541.1| OmpA domain protein [Octadecabacter antarcticus 238]
Length = 311
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 44/122 (36%), Gaps = 2/122 (1%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRN 96
+ E + + F+T S + A L L + + D + GH D GS +
Sbjct: 190 AQSLEDQGRFILSGLVFETGSAQLGDAIFGSLQYLADYLIANPDRTVALVGHTDFFGSLD 249
Query: 97 SSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+IAL RRA +V V ++ G P E+ NRR V +
Sbjct: 250 GNIALSKRRAGSVLERLVTTYDIPRHQLDAQGMGYLSPVASNLTEEGREANRRVEVIITS 309
Query: 156 CR 157
+
Sbjct: 310 TQ 311
>gi|116748202|ref|YP_844889.1| OmpA/MotB domain-containing protein [Syntrophobacter fumaroxidans
MPOB]
gi|116697266|gb|ABK16454.1| OmpA/MotB domain protein [Syntrophobacter fumaroxidans MPOB]
Length = 189
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/106 (33%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
+++D SY + ++L + +EGH DE G+ ++ALG RRA
Sbjct: 82 NQDIYYDYDSYVLTEPAKRILDEKISFLKRYARVRVTVEGHCDERGTTEYNLALGERRAN 141
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ Y G+S + SYGKE P+ GHDE ++AKNRRA L
Sbjct: 142 SALQYIRNSGLSIQNLTSVSYGKERPAAMGHDEASWAKNRRAHFVL 187
>gi|261211953|ref|ZP_05926239.1| sodium-type flagellar protein MotY precursor [Vibrio sp. RC341]
gi|260838561|gb|EEX65212.1| sodium-type flagellar protein MotY precursor [Vibrio sp. RC341]
Length = 294
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
S + A + L+ + ++ + L+ + D + N+S L +RA + YF
Sbjct: 191 DSVELNKASQKRLAQIAEYIRYNSDIDLVLVSTYTDSTDTNNNSQNLSEKRAEVLREYFK 250
Query: 115 ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ G+ R++V YGK P KNRR ++ L
Sbjct: 251 SIGLPEDRIQVQGYGKRRPIADNASPIGKDKNRRVVISL 289
>gi|242281267|ref|YP_002993396.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
gi|242124161|gb|ACS81857.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
Length = 276
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 50/124 (40%), Gaps = 14/124 (11%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHA-------------- 89
S+G V F S S+ ++L + L++ L+ GH
Sbjct: 110 QILSIGADVLFTPDSTSLSIEGTRILDTVLPVLKRVKHPVLVAGHTSILRDELGEDYRVE 169
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D + + S + L R+ AV+NY + G+ + +K+ ++GK P + NRR
Sbjct: 170 DRDLTPDISWKISLNRSLAVYNYLIRNGMDSEMLKMEAFGKFRPRHPNSTPEGRKMNRRV 229
Query: 150 IVFL 153
+ L
Sbjct: 230 DLVL 233
>gi|206562638|ref|YP_002233401.1| OmpA family protein [Burkholderia cenocepacia J2315]
gi|198038678|emb|CAR54638.1| OmpA family protein [Burkholderia cenocepacia J2315]
Length = 223
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 5/116 (4%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGS----RNS 97
+ + F+ + P VL+ + L H D L+EGH D + S
Sbjct: 106 GVEIGIDAKILFNVGDARLLPDSSPVLNQIAQALSAHATGDILVEGHTDSVPIANAKYES 165
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA +V Y RG++ R+ P V G D + A+NRR +F+
Sbjct: 166 NWELSSARAGSVVRYLTERGVAPHRLAAIGRADTQPLVAGDDAASRARNRRVTIFV 221
>gi|167993292|ref|ZP_02574387.1| SciP protein [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205328610|gb|EDZ15374.1| SciP protein [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
Length = 434
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 40/123 (32%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
L + F ++ A V++ + + + GH D
Sbjct: 310 LTVDEDDQHSRVVFRGDAMFVPGQKTVSDAIRPVINKAAREIARVGGAVTVTGHTDSQPI 369
Query: 95 RNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
++ L +RA V + G+ A R+ + G +P + AKNRR
Sbjct: 370 HSAEFPSNLVLSEKRAAEVAALLTSGGVPAGRVHIVGKGDTVPVADNGSKAGRAKNRRVE 429
Query: 151 VFL 153
+ +
Sbjct: 430 ILV 432
>gi|127513695|ref|YP_001094892.1| flagellar motor protein MotB [Shewanella loihica PV-4]
gi|126638990|gb|ABO24633.1| OmpA/MotB domain protein [Shewanella loihica PV-4]
Length = 314
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 51/129 (39%), Gaps = 5/129 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
D + SL +Q + + F + S ++P V+ +G L+ + GH D
Sbjct: 172 VDGAIEIESLGQQIIIRIREKGAFSSGSGFLQPRFKPVIRRVGELLKDVPGIITVSGHTD 231
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAK 145
++ +S+ L +RA AV + V RMKV P V A+
Sbjct: 232 DMNISNELYSSNWDLSSKRAVAVAHELVRVPGFDQQRMKVVGMASTAPLVPNDSAANRAR 291
Query: 146 NRRAIVFLK 154
NRR + ++
Sbjct: 292 NRRVEIAIE 300
>gi|300896337|ref|ZP_07114879.1| outer membrane protein A [Escherichia coli MS 198-1]
gi|300359748|gb|EFJ75618.1| outer membrane protein A [Escherichia coli MS 198-1]
Length = 354
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F + +++P L L S L + D ++ G+ D +GS + L
Sbjct: 224 TLKSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSE 283
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RRA +V +Y +++GI A ++ G+ P + A +RR + +K
Sbjct: 284 RRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVK 343
Query: 155 GCR 157
G +
Sbjct: 344 GIK 346
>gi|255016489|ref|ZP_05288615.1| putative flagellar motor protein MotB [Bacteroides sp. 2_1_7]
Length = 280
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 49/127 (38%), Gaps = 6/127 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
L + + ++ D + F + S + + L+ L +++D D IEGH D
Sbjct: 141 SDELTVTEKNGKVYVAMSDKLLFQSGSARVDKRGKEALAKLAEVLNKQNDIDVYIEGHTD 200
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ L + RA +V G++ +++ G+ MP D +K
Sbjct: 201 SKPINTAQFKDNWDLSVIRATSVVRILTKDYGVNPLQIQPCGRGEFMPVADNETADGRSK 260
Query: 146 NRRAIVF 152
NRR +
Sbjct: 261 NRRTEII 267
>gi|254517028|ref|ZP_05129086.1| flagellar motor protein [gamma proteobacterium NOR5-3]
gi|219674533|gb|EED30901.1| flagellar motor protein [gamma proteobacterium NOR5-3]
Length = 286
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 49/151 (32%), Gaps = 9/151 (5%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVF----FDTSSYSIRPADIQV 68
+++ + D K D E ++ + F + S ++ + V
Sbjct: 108 TALLAETQADAEKLKDMLEDETQTGKVDVESDGRTITVRIREQGSFPSGSANLNTDFVPV 167
Query: 69 LSNLGSWLEKHDCDFLIEGHADELG----SRNSSIALGLRRAYAV-FNYFVARGISASRM 123
+ + L + IEGH D S+ L RA +V + RM
Sbjct: 168 MQRIRDALVEIPGTISIEGHTDSTPLRGGRYESNWGLSSSRALSVTHELLRDGLLKDDRM 227
Query: 124 KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
V + P + + A NRR + ++
Sbjct: 228 MVVGFADTRPFTFNDTVEGRASNRRVEIVIR 258
>gi|167588752|ref|ZP_02381140.1| OmpA/MotB domain protein [Burkholderia ubonensis Bu]
Length = 224
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 1/110 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNSSIALGLR 104
++ F T ++ P L L + G+ D +G S++AL R
Sbjct: 114 VNLAGDALFATGLATLTPTARASLDALLARQGNTAFTRVSVTGYTDSVGGDASNLALSQR 173
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RA AV Y + G++A + VT G P + A NRR + L+
Sbjct: 174 RAQAVAGYLKSHGLNARTVAVTGRGSADPVASNATAEGRASNRRVEISLE 223
>gi|302035624|ref|YP_003795946.1| hypothetical protein NIDE0237 [Candidatus Nitrospira defluvii]
gi|300603688|emb|CBK40019.1| exported protein of unknown function [Candidatus Nitrospira
defluvii]
Length = 513
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 54/129 (41%), Gaps = 14/129 (10%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH--DCDFLIEGHADELGS-------RN 96
+ D + +D+ ++PA + +L L +L +EGH+D +
Sbjct: 313 DDLADQLEYDSGEVKVKPAGVPILEQLAEYLRTAAGSQQVRVEGHSDNMEIGPSLKGVFP 372
Query: 97 SSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL-- 153
++ L RA + Y + +G + ++++ YG P E+ KNRR V L
Sbjct: 373 TNWELSKARAAEIVRYLIEKGGMDSAKLSAVGYGASRPVAGNGTEEGRKKNRRIEVVLDS 432
Query: 154 --KGCRANT 160
+G +A +
Sbjct: 433 PEEGTQAQS 441
>gi|227536270|ref|ZP_03966319.1| flagellar motor protein MotB [Sphingobacterium spiritivorum ATCC
33300]
gi|227243877|gb|EEI93892.1| flagellar motor protein MotB [Sphingobacterium spiritivorum ATCC
33300]
Length = 301
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 46/114 (40%), Gaps = 6/114 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHAD----ELGSRNSSIA 100
S+ D++ + + SY I + LS + ++ + D + LIEG+ D + ++
Sbjct: 162 ISLSDNMLYKSGSYEISDKAGETLSKIAKIIQDYKDYEVLIEGNTDTDPISKTNIRNNWD 221
Query: 101 LGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V G+ R+ G+ P KNRR + +
Sbjct: 222 LSTLRASSVVQALQNTYGVDPKRLTAGGRGQYNPIADNSTAAGKMKNRRTQIII 275
>gi|226227347|ref|YP_002761453.1| putative peptidoglycan-associated lipoprotein [Gemmatimonas
aurantiaca T-27]
gi|226090538|dbj|BAH38983.1| putative peptidoglycan-associated lipoprotein [Gemmatimonas
aurantiaca T-27]
Length = 185
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 1/132 (0%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDC 81
+ DT+ S + + + ++++F+ + +R L L
Sbjct: 43 RTTPAPTPVDTMEAYRSKIAEARARLLETIYFEYDADELRDEARASLDAKLAILNANPGL 102
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
I GH DE GS +IALG RR+ A Y RG+ ASR++ +S+G+E P+V G E+
Sbjct: 103 RIRIAGHCDERGSDEYNIALGRRRSEAAKRYLTDRGVDASRIETSSFGRERPAVSGTSEE 162
Query: 142 AYAKNRRAIVFL 153
+++KNRR +
Sbjct: 163 SWSKNRRDEFEI 174
>gi|78356582|ref|YP_388031.1| motB protein [Desulfovibrio desulfuricans subsp. desulfuricans str.
G20]
gi|78218987|gb|ABB38336.1| motB protein, putative [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 245
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 49/131 (37%), Gaps = 6/131 (4%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGH 88
+ V+ + + V V F+ +S I + +L L + +K D I G+
Sbjct: 110 GVEGVIGAVFDEGVITIKVPAGVLFEKNSVDISADGLSMLEGLNDFFLKKKDQSINIRGY 169
Query: 89 ADELGS-----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
D+ + + RA V +F+ GI R+ T G P E+
Sbjct: 170 TDDSVPAAGSRFRDNWEISALRAVNVLRFFLKSGIEPGRLTATGLGDLDPLFPNTSEENR 229
Query: 144 AKNRRAIVFLK 154
AKNRR L+
Sbjct: 230 AKNRRVEFVLE 240
>gi|88812420|ref|ZP_01127670.1| flagellar motor protein [Nitrococcus mobilis Nb-231]
gi|88790427|gb|EAR21544.1| flagellar motor protein [Nitrococcus mobilis Nb-231]
Length = 312
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 47/129 (36%), Gaps = 5/129 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+ + + Q V + F + S + + + +G + + +I GH D +
Sbjct: 162 IEVAQIGAQIVIRVREHGSFPSGSAKLIKPFLPAVRKIGQAIRMTEGQVIIAGHTDNVPI 221
Query: 95 RN----SSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
N S+ L RA ++ A + A+R+ V + P V A+NRR
Sbjct: 222 HNAQFRSNWDLSAARAISLLRALGAVEAVDANRITVAGHADTRPIVSNDTPRHRARNRRV 281
Query: 150 IVFLKGCRA 158
+ L
Sbjct: 282 EIILVNGNG 290
>gi|303325524|ref|ZP_07355967.1| OmpA family protein [Desulfovibrio sp. 3_1_syn3]
gi|302863440|gb|EFL86371.1| OmpA family protein [Desulfovibrio sp. 3_1_syn3]
Length = 332
Score = 68.3 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 2/111 (1%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIA 100
+ V V F +SY++ + +L+ S ++ + ++ G D +G+ +
Sbjct: 220 QDEDVIVLRGVHFAFNSYALDGKAMGILNEAASLIKANPNKRVILNGWTDWIGTDAYNKV 279
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
L RA AV NY +GI ASRM GK E+ NRR +
Sbjct: 280 LSQNRANAVKNYLEKQGIPASRMTAIGRGKSF-KYDNKTEEGRYMNRRTEI 329
>gi|262403725|ref|ZP_06080283.1| protein F-related protein [Vibrio sp. RC586]
gi|262350229|gb|EEY99364.1| protein F-related protein [Vibrio sp. RC586]
Length = 199
Score = 68.3 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 1/111 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIA 100
+ V +++ F+T S + + + L ++ +L D ++EGH D G+ +
Sbjct: 82 DYPMIKVSNTIRFETGSAKVSASSKRWLDSMARFLASESGIDIVLEGHTDNTGAERFNDK 141
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
L RRA AV V ++ + + +G+ +P+ A NRR V
Sbjct: 142 LSERRASAVKTVLVQSRVAQNAIYTRGFGESVPACTNSTVKGRACNRRVEV 192
>gi|260597356|ref|YP_003209927.1| outer membrane protein A [Cronobacter turicensis z3032]
gi|260216533|emb|CBA29736.1| Outer membrane protein A [Cronobacter turicensis z3032]
Length = 355
Score = 68.3 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L + S L + D ++ G D +GS + + L
Sbjct: 225 TLKSDVLFNFNKATLKPEGQQALDQMYSQLSNLDPKDGSVVVLGFTDRIGSDSYNQGLSE 284
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
+RA +V +Y +++GI ++++ G+ P + A +RR + +K
Sbjct: 285 KRAQSVVDYLISKGIPSNKISARGMGESNPVTGNTCDNVKPRAALIECLGPDRRVEIEVK 344
Query: 155 GCR 157
G +
Sbjct: 345 GVK 347
>gi|254467364|ref|ZP_05080775.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
gi|206688272|gb|EDZ48754.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
Length = 209
Score = 68.3 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 42/142 (29%), Positives = 64/142 (45%), Gaps = 4/142 (2%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
G L+ + L +F+ V ++ FD S + VL W+ +
Sbjct: 32 GEATLNNAAVMSNDRSFAIQLAGRFAQEVPTTITFDFDSAQLDQTARAVLDQQAHWIRQF 91
Query: 80 D-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT-SYGKEMPSVYG 137
F + GH D +GS + ALGLRRA A NY V+RGIS SR++ S+G+ P +
Sbjct: 92 PEVRFRVFGHTDAVGSDAYNRALGLRRARAAVNYLVSRGISRSRLEAVISHGETQPLIP- 150
Query: 138 HDEDAYAKNRRAIVFLKGCRAN 159
+ +NRR + + G N
Sbjct: 151 -TPERERRNRRTVTEVSGFLKN 171
>gi|331672486|ref|ZP_08373276.1| outer membrane protein A [Escherichia coli TA280]
gi|331070392|gb|EGI41757.1| outer membrane protein A [Escherichia coli TA280]
Length = 370
Score = 68.3 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F + +++P L L S L + D ++ G+ D +GS + L
Sbjct: 240 TLKSDVLFTFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSE 299
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RRA +V +Y +++GI A ++ G+ P + A +RR + +K
Sbjct: 300 RRAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVK 359
Query: 155 GCR 157
G +
Sbjct: 360 GIK 362
>gi|269302570|gb|ACZ32670.1| peptidoglycan-associated lipoprotein [Chlamydophila pneumoniae
LPCoLN]
Length = 192
Score = 68.3 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 41/106 (38%), Positives = 64/106 (60%), Gaps = 2/106 (1%)
Query: 50 DSVFFDTSSYSIRPADI-QVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAY 107
++ F T SY+I+ + +L+NL +++K+ IEGH DE G+ + ++ALG RRA
Sbjct: 84 RNITFATDSYTIKGEENLAILTNLVHYMKKNPKATLYIEGHTDERGAASYNLALGARRAN 143
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
A+ + +GISA R+ SYGKE P GH+E A+ +NRR +
Sbjct: 144 AIKEHLRKQGISADRLPTISYGKEHPLNSGHNELAWQQNRRTEFKI 189
>gi|262171987|ref|ZP_06039665.1| sodium-type flagellar protein MotY precursor [Vibrio mimicus
MB-451]
gi|261893063|gb|EEY39049.1| sodium-type flagellar protein MotY precursor [Vibrio mimicus
MB-451]
Length = 286
Score = 68.3 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
S + A + L+ + ++ + L+ + D + N+S L +RA + YF
Sbjct: 183 DSVELNKASQKRLAQIAEYVRYNSDIDLVLVSTYTDSTDTNNNSQNLSEKRAEVLREYFK 242
Query: 115 ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ G+ R++V YGK P KNRR ++ L
Sbjct: 243 SIGLPEDRIQVQGYGKRRPIADNASPIGKDKNRRVVISL 281
>gi|188576036|ref|YP_001912965.1| flagellar motor protein MotD [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188520488|gb|ACD58433.1| OmpA family protein [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 286
Score = 68.3 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 45/121 (37%), Gaps = 4/121 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ + F T S ++ LS L S L + +EG+ D S+
Sbjct: 158 IEVEINSDILFGTGSAALAGNARTTLSTLASVLREAPNGVRVEGYTDNQPIATAQFPSNW 217
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
L RA +V + F G++ R+ + YG+ E NRR ++ + A
Sbjct: 218 ELSAARAASVVHLFADDGVAPQRLAMVGYGEFRARADNSTEAGRNANRRVVLIILADSAG 277
Query: 160 T 160
+
Sbjct: 278 S 278
>gi|153868783|ref|ZP_01998526.1| outer membrane OmpA family protein [Beggiatoa sp. PS]
gi|152074626|gb|EDN71462.1| outer membrane OmpA family protein [Beggiatoa sp. PS]
Length = 533
Score = 68.3 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 5/104 (4%)
Query: 54 FDTSSYSIRPADIQVLSN----LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
FDT+S ++P L L S +EGH D G+ +++ L RRA +V
Sbjct: 139 FDTNSAELKPFHKSQLQQWEQGLTSSKSLTPPSVRVEGHTDSRGTDENNMTLSERRATSV 198
Query: 110 FNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ G S+ R + YG+ + E+ A NRR +
Sbjct: 199 KKHLVEELGASSDRFDIIPYGESQLTASEETEEGRALNRRVEIV 242
>gi|225012476|ref|ZP_03702912.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A]
gi|225003453|gb|EEG41427.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A]
Length = 322
Score = 68.3 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 54/139 (38%), Gaps = 6/139 (4%)
Query: 22 DNLDTKISSPDTVLNESSLQ-----EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
D D + N +F S + + F SS + L + L
Sbjct: 183 DKEDKCPNEAGDKGNNGCPTIPKEFTEFIKSNQNKILFKASSSVLDKGGRATLEKVKMLL 242
Query: 77 EKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+ +IEGH GS + + L +RA A+ +Y +++ I ASR+ YG+ P
Sbjct: 243 NTYQNTAIIIEGHTSTDGSASYNQKLSEQRASAIKDYLISQTIDASRISTIGYGENQPIG 302
Query: 136 YGHDEDAYAKNRRAIVFLK 154
A++RRA + +
Sbjct: 303 DNKTVKGRAESRRAKIKIS 321
>gi|284040044|ref|YP_003389974.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
gi|283819337|gb|ADB41175.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
Length = 668
Score = 68.3 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRA 106
V +++++D ++IRP + L L + L+ + + H D ++ L RA
Sbjct: 558 VLENIYYDLDKFNIRPDAAEELDKLVTILKDNPTLKIELSSHTDVRAPDAYNMRLSQNRA 617
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGH-DEDAYAKNRRAIVFL 153
+ +Y V++G+ ASRM YG+ V E+ + +NRR +
Sbjct: 618 KSAVDYIVSKGVDASRMIAKGYGETQLIVKNAKTEEEHQRNRRTEFKI 665
>gi|163749515|ref|ZP_02156763.1| flagellar motor protein [Shewanella benthica KT99]
gi|161330924|gb|EDQ01851.1| flagellar motor protein [Shewanella benthica KT99]
Length = 304
Score = 68.3 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 52/129 (40%), Gaps = 5/129 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
D + SL +Q + + F + S ++P V+ +G L + G D
Sbjct: 162 VDGAIEIESLGQQIIIRIREKGAFSSGSGFLQPRFKPVIRRVGELLRDIPGIVTVSGFTD 221
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
++ +S+ L +RA AV + + RG +RMKV P V A+
Sbjct: 222 DMNISNELYSSNWDLSSKRAVAVAHELIKVRGFDQNRMKVVGMANTNPLVDNDSASNRAR 281
Query: 146 NRRAIVFLK 154
NRR + ++
Sbjct: 282 NRRVEIAIE 290
>gi|297518161|ref|ZP_06936547.1| outer membrane protein A [Escherichia coli OP50]
Length = 171
Score = 68.3 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 60/158 (37%), Gaps = 12/158 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + +S + + ++ V F+ + +++P L
Sbjct: 6 GMLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLKSDVLFNFNKATLKPEGQAALDQ 65
Query: 72 LGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L S L + D ++ G+ D +GS + L RRA +V +Y +++GI A ++
Sbjct: 66 LYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRAQSVVDYLISKGIPADKISARGM 125
Query: 129 GKEMPS--VYGHDEDAYAK-------NRRAIVFLKGCR 157
G+ P + A +RR + +KG +
Sbjct: 126 GESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKGIK 163
>gi|317047599|ref|YP_004115247.1| OmpA domain-containing protein transmembrane region-containing
protein [Pantoea sp. At-9b]
gi|316949216|gb|ADU68691.1| OmpA domain protein transmembrane region-containing protein
[Pantoea sp. At-9b]
Length = 356
Score = 68.3 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L L S L + D ++ G D +GS + L
Sbjct: 226 TLKSDVLFNFNKATLKPEGQQALDQLYSQLSSLDPKDGSVVVLGFTDRIGSEQYNQKLSE 285
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLK 154
+RA +V +Y V++GI A+++ GK P A +RR + +K
Sbjct: 286 KRAQSVVDYLVSKGIPANKISARGMGKSNPVTGNTCDSVKGRNALIDCLAPDRRVEIDVK 345
Query: 155 GCR 157
G +
Sbjct: 346 GIK 348
>gi|62178845|ref|YP_215262.1| hypothetical protein SC0275 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|62126478|gb|AAX64181.1| putative outer membrane protein, OmpA family [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|322713295|gb|EFZ04866.1| Type IV / VI secretion system, DotU [Salmonella enterica subsp.
enterica serovar Choleraesuis str. A50]
Length = 434
Score = 68.3 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 38/105 (36%), Gaps = 4/105 (3%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIA----LGLRRAYA 108
F ++ A V++ + + + GH D ++ L +RA
Sbjct: 328 MFVPGQKTVSDAIRPVINKAAREIARVGGAVTVTGHTDSQPIHSAEFPSNLVLSEKRAAE 387
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V + G+ A R+ + G +P + AKNRR + +
Sbjct: 388 VAALLTSGGVPAGRVHIVGKGDTVPVADNGSKAGRAKNRRVEILV 432
>gi|262195035|ref|YP_003266244.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
gi|262078382|gb|ACY14351.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
Length = 195
Score = 68.3 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 60/168 (35%), Gaps = 15/168 (8%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSS-------------- 47
++ + + + ++ G + ++
Sbjct: 3 RFVYALMSTALVLSLAACGSKPKAEATEPTSENMEVPETDDEPMEERTEAATGELRDVLI 62
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
+ + V F S + + L+ D ++GHAD+ G+ ++ALG RRA
Sbjct: 63 ILERVHFPLDSTDLPEDAREALAEAAPKLANNPDVHLYVDGHADQRGTEEYNVALGERRA 122
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
AV +Y G+SA + + S+G+ P A AKNRR L
Sbjct: 123 RAVSDYLTRMGVSADNLHLVSFGESRPVSEQGTNVAMAKNRRVDFRLM 170
>gi|304311123|ref|YP_003810721.1| Flagellar motor protein MotB [gamma proteobacterium HdN1]
gi|301796856|emb|CBL45068.1| Flagellar motor protein MotB [gamma proteobacterium HdN1]
Length = 359
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 55/148 (37%), Gaps = 4/148 (2%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+ +S ++ + + E S+ +V F ++S ++ ++L +
Sbjct: 124 ALSKLSEEMASRLQVEIQNADVKVVQRSEWLEVSIPSNVLFASASANLSADAARLLGKIS 183
Query: 74 SWLEKHDCDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
L+ D +EG D + S+ L RA AV FV G++ +R+ Y
Sbjct: 184 EVLKPADYSVQVEGFTDNVPIRTEQFPSNWELSAARAAAVVRLFVLGGVNPARLAAIGYA 243
Query: 130 KEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
+ + A NRR + + +
Sbjct: 244 DQRALGDNATAEGRALNRRINIIVSTSK 271
>gi|262194690|ref|YP_003265899.1| cysteine-rich repeat protein [Haliangium ochraceum DSM 14365]
gi|262078037|gb|ACY14006.1| cysteine-rich repeat protein [Haliangium ochraceum DSM 14365]
Length = 1793
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 44/109 (40%), Gaps = 2/109 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAV 109
+ F+ +S I+ L ++ L+ + LIEGH GS + L RA +V
Sbjct: 1680 KILFEFNSGVIKEESFPELDSVVRKLQSNPAVHLLIEGHTSSEGSARYNRRLSGVRAASV 1739
Query: 110 FNYFVARGISASRMKVTSYGKEMP-SVYGHDEDAYAKNRRAIVFLKGCR 157
Y V G+ A+R+ G+ E+A NRR + R
Sbjct: 1740 RKYLVEHGVEANRLASKGVGEAQLLIAPDDTEEARETNRRVEFTITRGR 1788
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 55/128 (42%), Gaps = 3/128 (2%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN--LGSWLEKHDCDFLIEGHAD 90
+ + ++L ++ + ++ +S +++ A ++L L ++GH
Sbjct: 1541 SEIPPTTLCKELEIGDDFKIAYELNSANLQAASKEMLERDVLWILRAHPQIRVEVQGHTS 1600
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV-YGHDEDAYAKNRRA 149
G ++ L RRA +V ++ V GI R+ +G ++P V + E +NRR
Sbjct: 1601 GEGKLAYNMELSQRRAQSVVDFLVEHGIEGERLSAVGHGPKVPLVTPENSEADRERNRRI 1660
Query: 150 IVFLKGCR 157
++ R
Sbjct: 1661 EFSIQPRR 1668
>gi|71908538|ref|YP_286125.1| OmpA/MotB [Dechloromonas aromatica RCB]
gi|71848159|gb|AAZ47655.1| OmpA/MotB [Dechloromonas aromatica RCB]
Length = 175
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 18/168 (10%)
Query: 2 QYSTIFIILSAITMMSISGI---------------DNLDTKISSPDTVLNE--SSLQEQF 44
+ + ++ SA+ +++ D++ ++P + ++L++
Sbjct: 3 KKIALALLSSAVCLLAACSTTATAPTETTTPQKAPDSVRPVAAAPSGLSAADLAALRDPS 62
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGL 103
+ S++FD S +I+ V G + + + G+ DE GSR ++ALG
Sbjct: 63 NPLSKRSIYFDLDSSAIKQEYRSVAEAHGKFLANRPGVKVTVRGNTDERGSREYNLALGQ 122
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RRA A A G+ + +++ SYG E P+ GH+E A+AKNR A +
Sbjct: 123 RRADATKQALSAYGVVSDQIETVSYGSEKPAAEGHNEAAWAKNRHADI 170
>gi|262402652|ref|ZP_06079213.1| sodium-type flagellar protein MotY precursor [Vibrio sp. RC586]
gi|262351434|gb|EEZ00567.1| sodium-type flagellar protein MotY precursor [Vibrio sp. RC586]
Length = 294
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
S + A + L+ + ++ + L+ + D + N+S L +RA + YF
Sbjct: 191 DSVELNKASQKRLAQIAEYVRYNSDIDLVLVSTYTDSTDTNNNSQNLSEKRAEVLREYFK 250
Query: 115 ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ G+ R++V YGK P KNRR ++ L
Sbjct: 251 SIGLPEDRIQVQGYGKRRPIADNASPIGKDKNRRVVISL 289
>gi|260769061|ref|ZP_05877995.1| sodium-type flagellar protein MotY precursor [Vibrio furnissii CIP
102972]
gi|260617091|gb|EEX42276.1| sodium-type flagellar protein MotY precursor [Vibrio furnissii CIP
102972]
Length = 294
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 2/99 (2%)
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
S + A + L+ + ++ + L+ + D RN S +L +RA ++ YF
Sbjct: 191 DSVELNKASQKRLAQIAEYIRYNPDIDLVLVSTYTDSTDGRNESQSLSDKRAESLQKYFE 250
Query: 115 ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ G+ + R++V YGK P KNRR ++ L
Sbjct: 251 SLGLPSDRIQVQGYGKRRPIADNASPIGKDKNRRVVISL 289
>gi|300772310|ref|ZP_07082180.1| OmpA family protein [Sphingobacterium spiritivorum ATCC 33861]
gi|300760613|gb|EFK57439.1| OmpA family protein [Sphingobacterium spiritivorum ATCC 33861]
Length = 301
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 46/114 (40%), Gaps = 6/114 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHAD----ELGSRNSSIA 100
S+ D++ + + SY I + LS + ++ + D + LIEG+ D + ++
Sbjct: 162 ISLSDNMLYKSGSYEISDKAGETLSKIAKIIQDYKDYEVLIEGNTDTDPISKTNIRNNWD 221
Query: 101 LGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V G+ R+ G+ P KNRR + +
Sbjct: 222 LSTLRASSVVQALQNTYGVDPKRLTAGGRGQYNPIADNSTAAGKMKNRRTQIII 275
>gi|222111846|ref|YP_002554110.1| ompa/motb domain-containing protein [Acidovorax ebreus TPSY]
gi|221731290|gb|ACM34110.1| OmpA/MotB domain protein [Acidovorax ebreus TPSY]
Length = 233
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 42/125 (33%), Gaps = 9/125 (7%)
Query: 36 NESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGS 94
+ + ++ S + V FD +R + L L+ + + GH D G
Sbjct: 105 AQPTPEQAISIDLPADVLFDFDKAELRADAARSLDKAAELLKSYPQAPIDVVGHTDGKGG 164
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD------EDAYAKNRR 148
+ AL RRA AV +R + GK P D +NRR
Sbjct: 165 DTYNDALSQRRAAAVAAALQSRTGRP--IATRGMGKRQPVAPNTTPDGRDDPDGRQRNRR 222
Query: 149 AIVFL 153
+ +
Sbjct: 223 VQIVI 227
>gi|167624989|ref|YP_001675283.1| flagellar motor protein MotB [Shewanella halifaxensis HAW-EB4]
gi|167355011|gb|ABZ77624.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4]
Length = 322
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 55/133 (41%), Gaps = 5/133 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
D + SL +Q + + F + S ++P V+ +G L+ + GH D
Sbjct: 180 VDGAIEIESLGQQIIIRIREKGSFASGSGFLQPRFKPVVRRVGELLKDVPGIVTVSGHTD 239
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ +S+ L +RA AV + + +G RMKV P V + A+
Sbjct: 240 DWKISNELYSSNWDLSSKRAVAVAHELIRVKGFDQQRMKVVGMASSAPLVENNSSANRAR 299
Query: 146 NRRAIVFLKGCRA 158
NRR + ++ +A
Sbjct: 300 NRRVEIAIEQGKA 312
>gi|269962960|ref|ZP_06177298.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269832322|gb|EEZ86443.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 430
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 47/121 (38%), Gaps = 4/121 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+ +L ++ S+ F++ S + V+S L LE + L+ GH D+
Sbjct: 304 VTVDALPDRVRISIKAQDLFESGSAEVVEYIQPVISKLARTLEATEGKILVAGHTDDKPI 363
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
S+ L L RA A+ +A R+ G P V ++ A NRR
Sbjct: 364 FTSKYPSNWHLSLARATAMSEQLIANSALKGRVLPEGLGDARPLVDNTSDENRALNRRIE 423
Query: 151 V 151
+
Sbjct: 424 I 424
>gi|153877559|ref|ZP_02004282.1| conserved hypothetical protein, secreted [Beggiatoa sp. PS]
gi|152065977|gb|EDN65718.1| conserved hypothetical protein, secreted [Beggiatoa sp. PS]
Length = 188
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 1/132 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
+D +++S + ++F +I+ +L ++ + +
Sbjct: 56 ATVDATKFPMTGSSSQNSTADLSGVPSERIIYFGYDMSNIKSNARTILEQHAAYLTQNPE 115
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+EGHADE GSR ++ALG RRA N + G+ +++ SYG+E P + H+E
Sbjct: 116 IYVRLEGHADERGSREYNLALGERRAETAKNTLIMLGVFETQVTTLSYGEERPQTFEHNE 175
Query: 141 DAYAKNRRAIVF 152
++ +NRR +
Sbjct: 176 QSWQQNRRVELV 187
>gi|323494548|ref|ZP_08099653.1| putative outer membrane protein [Vibrio brasiliensis LMG 20546]
gi|323311275|gb|EGA64434.1| putative outer membrane protein [Vibrio brasiliensis LMG 20546]
Length = 204
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 49/108 (45%), Gaps = 1/108 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
+ F SY I P + + + I+G+A ++G + ++ L +RA+AV
Sbjct: 82 RILFANDSYEINPIFSDQIQTMAEFLARYKSASIQIQGYASKVGDPDYNLELSKKRAHAV 141
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
+ ++ + R+ + YG+ G DE ++A NRR + G +
Sbjct: 142 EDELLSFEVDPKRVTIVGYGETRLEAEGDDETSHALNRRVTATVVGLK 189
>gi|296124309|ref|YP_003632087.1| OmpA/MotB domain protein [Planctomyces limnophilus DSM 3776]
gi|296016649|gb|ADG69888.1| OmpA/MotB domain protein [Planctomyces limnophilus DSM 3776]
Length = 275
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 42/120 (35%), Gaps = 11/120 (9%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK---HDCDFLIEGHADELGS------- 94
S +++ F + S IRP +L + L+ GH D+
Sbjct: 139 VSKFQENLLFASGSDEIRPEAYALLQEFARIMNSADSKHLKVLVVGHTDDKPISRKAVAD 198
Query: 95 -RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L RA +V G++ RM Y P D+ KNRR +F+
Sbjct: 199 KHPTNWHLSTDRANSVVLALKKSGLAEQRMGAAGYSLFQPLAPNSDDKNRQKNRRVEIFV 258
>gi|298529291|ref|ZP_07016694.1| OmpA/MotB domain protein [Desulfonatronospira thiodismutans ASO3-1]
gi|298510727|gb|EFI34630.1| OmpA/MotB domain protein [Desulfonatronospira thiodismutans ASO3-1]
Length = 359
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRA 106
V ++ FD S +I+ ++L+ ++ D ++EGH +G + ++ L RRA
Sbjct: 252 VFSNIQFDFDSAAIKDEYAEILNEAARQIQDRTDPHVVVEGHTCNIGPEDYNMELSQRRA 311
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+V +Y V +G+ + ++G P + NRR + L+
Sbjct: 312 DSVADYLVEQGVDEDAIDTEAHGLTRPEFDNDTREGRQLNRRVEMRLE 359
>gi|87122282|ref|ZP_01078164.1| OmpA family protein [Marinomonas sp. MED121]
gi|86162425|gb|EAQ63708.1| OmpA family protein [Marinomonas sp. MED121]
Length = 204
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAV 109
V FDT + ++PA L L S+L+K+ +IEGH D +GS+ S+ L +RA A+
Sbjct: 73 KVLFDTGKHEVKPAFYSELRELASFLKKNPASSVIIEGHTDNVGSKTSNQTLSFQRASAI 132
Query: 110 FNYFVARGIS-ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +R++ +G+ P NRR + +
Sbjct: 133 AAVITDKFKIAPNRVQAKGFGETSPIASNETHSGREANRRVVAEV 177
>gi|154490982|ref|ZP_02030923.1| hypothetical protein PARMER_00899 [Parabacteroides merdae ATCC
43184]
gi|154088730|gb|EDN87774.1| hypothetical protein PARMER_00899 [Parabacteroides merdae ATCC
43184]
Length = 278
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 47/127 (37%), Gaps = 6/127 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
L + ++ D + F++ S + + L+ L ++ D D IEGH D
Sbjct: 138 SDELTVREKDGKVYVAMSDKLLFESGSARVDKRGKEALAKLAEVLNKQSDIDVYIEGHTD 197
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ L + RA +V G+ +++ G+ MP D AK
Sbjct: 198 SKPINTAQFKDNWDLSVIRATSVVRILTKDYGVKPLQIQPCGRGEFMPVADNETADGRAK 257
Query: 146 NRRAIVF 152
NRR +
Sbjct: 258 NRRTEII 264
>gi|304397112|ref|ZP_07378991.1| OmpA domain protein transmembrane region-containing protein
[Pantoea sp. aB]
gi|304355261|gb|EFM19629.1| OmpA domain protein transmembrane region-containing protein
[Pantoea sp. aB]
Length = 356
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 59/145 (40%), Gaps = 12/145 (8%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDC 81
D +P + + E ++ V F + +++P Q L L S ++ D
Sbjct: 204 DVAAPAPAPAPAPAPVVETKRFTLKSDVLFTFNKSTLKPEGQQALDQLYSQLSSMDPKDG 263
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHD 139
++ G D +GS + L +RA +V +Y V++GI ++++ GK P
Sbjct: 264 SVVVLGFTDRIGSEQYNQKLSEKRAQSVVDYLVSKGIPSNKISARGMGKSNPVTGNTCDS 323
Query: 140 EDAY-------AKNRRAIVFLKGCR 157
+ +RR + +KG +
Sbjct: 324 VKGRNALIDCLSPDRRVEIDVKGIK 348
>gi|242280306|ref|YP_002992435.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
gi|242123200|gb|ACS80896.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
Length = 250
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 46/134 (34%), Gaps = 6/134 (4%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FL 84
+ +++ + + + V F+ + + L ++ H
Sbjct: 110 QTTKGVEGIMSAKFEDGKITLKLPSDVLFNPGQVQLSEKGRNAVKALKNFFISHPDQYIN 169
Query: 85 IEGHADELGSR-----NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
I+G+ D+ + + RA V Y + GI +R+ T G+ P V +
Sbjct: 170 IKGYTDDTQPSSKSRLKDNWEISSLRAVNVLRYLMKLGIKPNRLTATGLGEMDPLVPNNS 229
Query: 140 EDAYAKNRRAIVFL 153
+ +NRR L
Sbjct: 230 KRNRQRNRRVEFVL 243
>gi|153207149|ref|ZP_01945928.1| putative peptidoglycan-associated lipoprotein [Coxiella burnetii
'MSU Goat Q177']
gi|161831560|ref|YP_001596059.1| putative peptidoglycan-associated lipoprotein [Coxiella burnetii
RSA 331]
gi|165918434|ref|ZP_02218520.1| putative peptidoglycan-associated lipoprotein [Coxiella burnetii
RSA 334]
gi|120576810|gb|EAX33434.1| putative peptidoglycan-associated lipoprotein [Coxiella burnetii
'MSU Goat Q177']
gi|161763427|gb|ABX79069.1| putative peptidoglycan-associated lipoprotein [Coxiella burnetii
RSA 331]
gi|165917940|gb|EDR36544.1| putative peptidoglycan-associated lipoprotein [Coxiella burnetii
RSA 334]
Length = 182
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 73/178 (41%), Gaps = 26/178 (14%)
Query: 1 MQY--STIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQ--------------- 43
M + + A+ +++SG + ++ + + + Q
Sbjct: 1 MNNLVKNSGLAVIALATLNLSGCKHHPAGANAATGLSDGTGAQAYALAEGKGYQGQLKKD 60
Query: 44 --------FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGS 94
+ + +FD S +R D+ + ++L H +EG+ D GS
Sbjct: 61 SEGRIINPLVAPANQTYYFDFDSTQLRSLDLGAIRVQANYLATHSTAKVRLEGNTDNRGS 120
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
R +I LG RR AV G++ ++ + SYGKE P+V G++E+A+ NRR +
Sbjct: 121 REYNIGLGWRRDQAVARILEQEGVAPKQIDMVSYGKERPAVMGNNENAWRLNRRVNLI 178
>gi|332882695|ref|ZP_08450307.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332679495|gb|EGJ52480.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 344
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 49/111 (44%), Gaps = 6/111 (5%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
D++ FD +IR L+ + ++ E + I+ H D G + +++L +A
Sbjct: 234 DNIHFDYGRINIRYDASVQLAKIVTFLEEHPNVRLDIKVHTDSRGDDDYNMSLSNTQAKV 293
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGH-----DEDAYAKNRRAIVFLK 154
+ + + +GIS +R+ YG+ P E+ + N+R +K
Sbjct: 294 IEQWLIDKGISRNRLTAKGYGETQPVNGCENGVPCTEEQHQANKRVEFIVK 344
>gi|212213380|ref|YP_002304316.1| peptidoglycan-associated lipoprotein [Coxiella burnetii CbuG_Q212]
gi|212011790|gb|ACJ19171.1| peptidoglycan-associated lipoprotein [Coxiella burnetii CbuG_Q212]
Length = 195
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 73/178 (41%), Gaps = 26/178 (14%)
Query: 1 MQY--STIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQ--------------- 43
M + + A+ +++SG + ++ + + + Q
Sbjct: 14 MNNLVKNSGLAVIALATLNLSGCKHHPAGANAATGLSDGTGAQAYALAEGKGYQGQLKKD 73
Query: 44 --------FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGS 94
+ + +FD S +R D+ + ++L H +EG+ D GS
Sbjct: 74 SEGRIINPLVAPANQTYYFDFDSTQLRSLDLGAIRVQANYLATHSTAKVRLEGNTDNRGS 133
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
R +I LG RR AV G++ ++ + SYGKE P+V G++E+A+ NRR +
Sbjct: 134 REYNIGLGWRRDQAVARILEQEGVAPKQIDMVSYGKERPAVIGNNENAWRLNRRVNLI 191
>gi|256842297|ref|ZP_05547801.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|256736181|gb|EEU49511.1| conserved hypothetical protein [Parabacteroides sp. D13]
Length = 295
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 49/127 (38%), Gaps = 6/127 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
L + + ++ D + F + S + + L+ L +++D D IEGH D
Sbjct: 156 SDELTVTEKNGKVYVAMSDKLLFQSGSAKVDKRGKEALAKLAEVLNKQNDIDVYIEGHTD 215
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ L + RA +V G++ +++ G+ MP D +K
Sbjct: 216 SKPINTAQFKDNWDLSVIRATSVVRILTKDYGVNPLQIQPCGRGEFMPVADNETADGRSK 275
Query: 146 NRRAIVF 152
NRR +
Sbjct: 276 NRRTEII 282
>gi|42528870|gb|AAS18468.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Gallinarum]
Length = 319
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V + + +++P Q L L S L + D ++ G D +GS + L
Sbjct: 195 TLKSDVLVNFNKSTLKPEGQQALDQLYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSE 254
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE---------DAYAKNRRAIVFLK 154
+RA +V +Y +++GI + ++ G+ P + D A +RR + +K
Sbjct: 255 KRAQSVVDYLISKGIPSDKISARGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEVK 314
Query: 155 GCR 157
G +
Sbjct: 315 GVK 317
>gi|113969550|ref|YP_733343.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-4]
gi|113884234|gb|ABI38286.1| OmpA/MotB domain protein [Shewanella sp. MR-4]
Length = 191
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 40/105 (38%), Gaps = 2/105 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
V+F+ + + + + L+ + + + GH D +G+ + L LRRA V
Sbjct: 84 IVYFEFAIAEVDLSQWKALALVKAFLDANTETRLTLVGHTDIVGTPEFNYQLSLRRAQNV 143
Query: 110 FNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V G + +R V G P H + NRR +
Sbjct: 144 KRILVEDYGFNPNRFTVIGKGISEPVADNHSSEGRRLNRRVQFIV 188
>gi|317502696|ref|ZP_07960808.1| immunogenic lipoprotein PG3 [Prevotella salivae DSM 15606]
gi|315666182|gb|EFV05737.1| immunogenic lipoprotein PG3 [Prevotella salivae DSM 15606]
Length = 225
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 2/126 (1%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELG 93
+ +++ + + + F T+ ++ + L L+ + DC I GH D G
Sbjct: 88 VTDANGLKAVKVTFDSGILFATNQATLTASSKNDLVKFSKVLKDNSDCHVDIYGHTDNTG 147
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ +I L RRA +V NY + G+S+S+ + V G P +NRR V+
Sbjct: 148 NDAINIPLSNRRAESVVNYLKSCGVSSSQFQNVVGKGSSEPVADNSTAAGRKQNRRVEVY 207
Query: 153 LKGCRA 158
L A
Sbjct: 208 LYASPA 213
>gi|117919656|ref|YP_868848.1| OmpA/MotB domain-containing protein [Shewanella sp. ANA-3]
gi|117611988|gb|ABK47442.1| OmpA/MotB domain protein [Shewanella sp. ANA-3]
Length = 191
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 40/105 (38%), Gaps = 2/105 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
V+F+ + + + + L+ + + + GH D +G+ + L LRRA V
Sbjct: 84 IVYFEFAIAEVDLSQWKALALVKAFLDANTETRLTLVGHTDIVGTPEFNYQLSLRRAQNV 143
Query: 110 FNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V G + +R V G P H + NRR +
Sbjct: 144 KRILVEDYGFNPNRFTVVGKGISEPVADNHSSEGRRLNRRVQFIV 188
>gi|323341391|ref|ZP_08081635.1| flagellar motor protein B [Lactobacillus ruminis ATCC 25644]
gi|323091268|gb|EFZ33896.1| flagellar motor protein B [Lactobacillus ruminis ATCC 25644]
Length = 267
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 61/147 (41%), Gaps = 7/147 (4%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
+ ++ D + + S + ++ S+ F++ S + A Q+L L
Sbjct: 117 LKEVAEKLKQDIQNTGRAGNTTVSYESDGVHLNLDSSILFNSGSADLSDAVKQMLDKLVP 176
Query: 75 WLEKHDCD-FLIEGHADE-----LGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTS 127
L++ + ++ G+ D + S+ L RA V YFV++G + + V +
Sbjct: 177 DLKQVSSNPVIVAGYTDNVPVSKRSNYASNWELSSARAVTVMRYFVSKGAISESNVSVQA 236
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFLK 154
Y + P ++ A+NRR + ++
Sbjct: 237 YAENKPKASNDTDEGKAQNRRVEIIIQ 263
>gi|217970007|ref|YP_002355241.1| OmpA/MotB domain protein [Thauera sp. MZ1T]
gi|217507334|gb|ACK54345.1| OmpA/MotB domain protein [Thauera sp. MZ1T]
Length = 200
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 50/129 (38%), Gaps = 1/129 (0%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPA-DIQVLSNLGSWLEKHDCDFLI 85
+ V S+ F + + F + S +IRP + + + + +
Sbjct: 69 ATTGLAGVEIGSAGDTGFRVQIPVADGFASGSPAIRPTLGRALDALAPALAAEAGVAVRV 128
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
GH D GS ++ L + RA AV + RGI+ R+ G+ P E+ +
Sbjct: 129 VGHTDSQGSEMVNLRLSIARAEAVVAWLRERGIALDRLAADGRGEADPLTSNATEEGRVR 188
Query: 146 NRRAIVFLK 154
NRR + L
Sbjct: 189 NRRIELILS 197
>gi|186896079|ref|YP_001873191.1| OmpA/MotB domain-containing protein [Yersinia pseudotuberculosis
PB1/+]
gi|186699105|gb|ACC89734.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis PB1/+]
Length = 560
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 4/112 (3%)
Query: 53 FFDTSSYSIRPADIQVLSN---LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
FD++S ++ L + LI GH+D GS + ++ L +RA A+
Sbjct: 441 LFDSNSTKLKLNSQTNEMMMELLSLVEQNKGKKILIVGHSDNTGSSSMNMTLSEQRALAL 500
Query: 110 FNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
++ + R G P H E +NRR V + + T
Sbjct: 501 RDWLIKRSDITVDNFITKGMGASEPVATNHTEAGREQNRRVEVLILPTQDRT 552
>gi|149193985|ref|ZP_01871083.1| OmpA/MotB [Caminibacter mediatlanticus TB-2]
gi|149135938|gb|EDM24416.1| OmpA/MotB [Caminibacter mediatlanticus TB-2]
Length = 196
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 64/132 (48%), Gaps = 3/132 (2%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV-FFDTSSYSIRPADIQVLSNLGSWLEK 78
+ + +++ +++ ++F+ + V +FD Y+IRP + L ++K
Sbjct: 58 NANVQEENLTATTVTVSKMQNNQEFAKKLASIVVYFDFDKYNIRPDQWPKVEKLAKLIKK 117
Query: 79 HD--CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ IEG+ DE G+ + ALGL+RA +V N + G+ ++ + SYG+ P
Sbjct: 118 NPSNYTVRIEGNCDEWGTEEYNYALGLKRANSVKNALIKLGVDPKKLTIISYGELNPVCT 177
Query: 137 GHDEDAYAKNRR 148
H + + NRR
Sbjct: 178 AHAKWCWRLNRR 189
>gi|332524606|ref|ZP_08400809.1| OmpA family domain protein [Rubrivivax benzoatilyticus JA2]
gi|332107918|gb|EGJ09142.1| OmpA family domain protein [Rubrivivax benzoatilyticus JA2]
Length = 240
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
V F+ S + A I+ L L + F + GH D+ G R+ ++AL RA AV
Sbjct: 136 VEFEPGSARLTDAGIERLDGLLAALNRAPARRFEVVGHTDDAGPRDLNLALSRERAEAVR 195
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ VARG++A+R++V G + P+ A+NRR +
Sbjct: 196 AHLVARGVAAARIEVRGAGPDEPAADNGTAAGRARNRRIEL 236
>gi|291442513|ref|ZP_06581903.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
gi|291345408|gb|EFE72364.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
Length = 208
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 43/122 (35%), Gaps = 2/122 (1%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHAD 90
D + + + + +V F S + + ++ + +E+ + G D
Sbjct: 76 DGAERRTDTNTEVTYELQAAVLFAKDSGRLSDSARSRIAAIAREIEQRAATRVRVTGFTD 135
Query: 91 ELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
LGS L +RA AV + A + +G+ P E + +NRR
Sbjct: 136 NLGSSVHGDILSTQRADAVRDVLTDDLRSEAVTFETHGFGERRPVASNATEASRRENRRV 195
Query: 150 IV 151
+
Sbjct: 196 EI 197
>gi|260773298|ref|ZP_05882214.1| Flagellar motor rotation protein MotB [Vibrio metschnikovii CIP
69.14]
gi|260612437|gb|EEX37640.1| Flagellar motor rotation protein MotB [Vibrio metschnikovii CIP
69.14]
Length = 314
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 42/125 (33%), Gaps = 5/125 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ +L +Q + + F S ++P ++ + ++ + GH D
Sbjct: 173 QGAVEVENLGQQILIRIRERGAFPEGSAFLQPQFRPLVRQIAELVKDVPGIVQVTGHTDN 232
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S+ L +RA +V G R++V P E ++N
Sbjct: 233 QRLDSELYRSNWDLSAQRAVSVAQEMERVTGFDHRRLEVRGLADTAPVGPNDTEAQRSRN 292
Query: 147 RRAIV 151
RR +
Sbjct: 293 RRVEI 297
>gi|51596997|ref|YP_071188.1| OMPA family outer membrane porin [Yersinia pseudotuberculosis IP
32953]
gi|51590279|emb|CAH21916.1| putative OMPA family outer membrane porin [Yersinia
pseudotuberculosis IP 32953]
Length = 560
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 4/112 (3%)
Query: 53 FFDTSSYSIRPADIQVLSN---LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
FD++S ++ L + LI GH+D GS + ++ L +RA A+
Sbjct: 441 LFDSNSTKLKLNSQTNEMMMELLSLVEQNKGKKILIVGHSDNTGSSSMNMTLSEQRALAL 500
Query: 110 FNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
++ + R G P H E +NRR V + + T
Sbjct: 501 RDWLIKRSDITVDNFITKGMGASEPVATNHTEAGREQNRRVEVLILPTQDRT 552
>gi|84500462|ref|ZP_00998711.1| OmpA domain protein [Oceanicola batsensis HTCC2597]
gi|84391415|gb|EAQ03747.1| OmpA domain protein [Oceanicola batsensis HTCC2597]
Length = 309
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 52/138 (37%), Gaps = 2/138 (1%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
+G P+ + V D + F + + ++ + L+ L +++
Sbjct: 168 ATGDATGPDAPEEPEADAELIDVLRTAGHVVLDDLDFQSGAAALADREYTSLAELAVYIK 227
Query: 78 KHDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSV 135
+ + GH D +G+ ++++AL RRA AV + R A S++ G P
Sbjct: 228 GDPARIVALVGHTDAVGAHDANVALSRRRAEAVRQRLIDRHGVAGSQVSARGAGFLAPVA 287
Query: 136 YGHDEDAYAKNRRAIVFL 153
+NRR L
Sbjct: 288 SNLTALGRERNRRVEAVL 305
>gi|254506333|ref|ZP_05118476.1| outer membrane protein [Vibrio parahaemolyticus 16]
gi|219550813|gb|EED27795.1| outer membrane protein [Vibrio parahaemolyticus 16]
Length = 225
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
V E + Q + + + F +SSY + + L + +E D +IEGH D
Sbjct: 99 SGVQVERVGENQLLLRLENGIGFSSSSYQLDSSIHNTLRGVARILVEYPDTSLVIEGHTD 158
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS ++ L RRA +V +Y V++G++A R G+ P + A NRR
Sbjct: 159 STGSDTTNQILSERRAESVRSYLVSQGVAAGRAIARGNGERYPLCTNSTAEGRACNRRVE 218
Query: 151 VFL 153
+ +
Sbjct: 219 IQI 221
>gi|209364239|ref|YP_001425325.2| peptidoglycan-associated lipoprotein [Coxiella burnetii Dugway
5J108-111]
gi|207082172|gb|ABS76935.2| peptidoglycan-associated lipoprotein [Coxiella burnetii Dugway
5J108-111]
Length = 195
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 73/178 (41%), Gaps = 26/178 (14%)
Query: 1 MQY--STIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQ--------------- 43
M + + A+ +++SG + ++ + + + Q
Sbjct: 14 MNNLVKNSGLAVIALATLNLSGCKHHPAGANAATGLSDGTGAQAYALAEGKGYQGQLKKD 73
Query: 44 --------FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGS 94
+ + +FD S +R D+ + ++L H +EG+ D GS
Sbjct: 74 SEGRIINPLVAPANQTYYFDFDSTQLRSLDLGAIRVQANYLATHSTAKVRLEGNTDNRGS 133
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
R +I LG RR AV G++ ++ + SYGKE P+V G++E+A+ NRR +
Sbjct: 134 REYNIGLGWRRDQAVARILEQEGVAPKQIDMVSYGKERPAVMGNNENAWRLNRRVNLI 191
>gi|253681414|ref|ZP_04862211.1| chemotaxis protein MotB [Clostridium botulinum D str. 1873]
gi|253561126|gb|EES90578.1| chemotaxis protein MotB [Clostridium botulinum D str. 1873]
Length = 242
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 57/132 (43%), Gaps = 6/132 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ + + + D++ FD++ I+ ++L + + LE +IEGH D
Sbjct: 108 NNTVQVKRDAKGIIIELKDNILFDSAQAEIKTPSKEILDKISNLLESVPNGIIIEGHTDN 167
Query: 92 LGSRN----SSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ N S+ L +RA V YF +G++ + + YG+ P + AKN
Sbjct: 168 VPIHNAKYASNWELSTQRAVNVLKYFVENKGLAPDKFQAAGYGEFHPIEKNDNYANKAKN 227
Query: 147 RRAIVFL-KGCR 157
RR + + G +
Sbjct: 228 RRVNILITSGEK 239
>gi|296157423|ref|ZP_06840258.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
gi|295892195|gb|EFG71978.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
Length = 584
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 26/161 (16%), Positives = 54/161 (33%), Gaps = 10/161 (6%)
Query: 2 QYSTIF-----IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDT 56
+ ++F I + +N + I + ++ + + F +
Sbjct: 421 KLKSLFGASYQIGSFDVAHAVADATENFRSAIKGLLAADSSCAVADVVKVLNLQVINFAS 480
Query: 57 SSYSIRPADIQVLSNLGSWLEKH-----DCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
+S + + ++ L+ L + G++D +G +++ L +RA AV
Sbjct: 481 ASARVPASAVEDLNQSAHVLNACAGNGKTARLEVAGYSDNVGGEQANLQLSKQRAEAVRA 540
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
Y V G+ A + YG P NRR
Sbjct: 541 YLVKTGVPADSLIAQGYGGARPVASNDTASGRFANRRIEFV 581
>gi|89093474|ref|ZP_01166422.1| flagellar motor protein [Oceanospirillum sp. MED92]
gi|89082164|gb|EAR61388.1| flagellar motor protein [Oceanospirillum sp. MED92]
Length = 313
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 41/109 (37%), Gaps = 5/109 (4%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSIALGLRRAYAV 109
FD+ S ++ I VL+ + L + IEGH+D + S+ L + RA AV
Sbjct: 176 FDSGSAELKFESIPVLAKIRDVLLDVKGNVSIEGHSDNIPYAGRRFESNWDLSVARALAV 235
Query: 110 FNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
+ R KV P V KNRR + + +
Sbjct: 236 AHELFGDPRIDQSRFKVLGMADTKPLVPNDTRANRVKNRRVEIIVTKGK 284
>gi|313205304|ref|YP_004043961.1| ompa/motb domain protein [Paludibacter propionicigenes WB4]
gi|312444620|gb|ADQ80976.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4]
Length = 294
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 45/115 (39%), Gaps = 6/115 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGS----RNSSIA 100
S+ D + F + S +I I + L + + D L+EGH D + +
Sbjct: 167 VSMSDKLLFKSGSAAIESKGIDAIKVLADVLNKNAEIDILVEGHTDNIPIKTALYQDNWD 226
Query: 101 LGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L + RA ++ I+ +R+ + G+ P + A NRR + L
Sbjct: 227 LSVARAISIVRILTNEYRIAPTRLTASGKGEFSPRASNATPEGRASNRRTEIILS 281
>gi|303248273|ref|ZP_07334535.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ]
gi|302490298|gb|EFL50210.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ]
Length = 246
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 41/135 (30%), Gaps = 6/135 (4%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFL 84
D V+ + + + V F + Q L + + ++
Sbjct: 107 VSTKGLDGVVAATLEAGKITIGFPAGVLFPKDGVDLTEEGKQRLRTVYDFLIKTAGERIN 166
Query: 85 IEGHADELGS-----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
I G D + + RA AV Y V+ G+ +R+ T P
Sbjct: 167 IRGFTDNQPPGAGSRFRDNWEVSSLRAVAVLRYMVSLGMPPNRLTATGLADLEPLYPNDT 226
Query: 140 EDAYAKNRRAIVFLK 154
A+N+R L+
Sbjct: 227 PAHRARNQRVEFVLE 241
>gi|288225947|gb|ADC44458.1| OmpA [Candidatus Erwinia dacicola]
Length = 324
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L L + L + D ++ G+ D + S + L
Sbjct: 194 TLKSDVLFNFNKNTLKPEGQQALDQLYTQLSNLDPKDGSVVVLGYTDRIDSEQYNQKLSE 253
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLK 154
+RA +V ++ V++GI AS++ GK P A +RR + +K
Sbjct: 254 KRAQSVVDHLVSKGIPASKIYARGKGKSNPIIGSTCDSVKGRNALIDCLAPDRRVEIEVK 313
Query: 155 GCR 157
G +
Sbjct: 314 GIK 316
>gi|146311126|ref|YP_001176200.1| outer membrane protein A [Enterobacter sp. 638]
gi|145318002|gb|ABP60149.1| OmpA domain protein transmembrane region-containing protein
[Enterobacter sp. 638]
Length = 351
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L L + L + D ++ G+ D +GS + L
Sbjct: 221 TLKSDVLFNFNKATLKPEGQQALDQLYTQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSE 280
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
+RA +V +Y V++GI A+++ G+ P + A +RR + +K
Sbjct: 281 KRAQSVVDYLVSKGIPANKISPRGMGESNPVTGATCDNVKPRAALIDCLAPDRRVEIEVK 340
Query: 155 GCR 157
G +
Sbjct: 341 GIK 343
>gi|88857215|ref|ZP_01131858.1| ompA family protein [Pseudoalteromonas tunicata D2]
gi|88820412|gb|EAR30224.1| ompA family protein [Pseudoalteromonas tunicata D2]
Length = 580
Score = 67.9 bits (164), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/155 (20%), Positives = 60/155 (38%), Gaps = 6/155 (3%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG----DSVFFDTSS 58
+S I + ++ SG+ + + K+ S + + +++ + F
Sbjct: 427 FSQFAISSAGQAIVEKSGLISQNIKVESVYPMAEAPEIYNKYADLGKRLSLNFRFNYGDQ 486
Query: 59 YSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI 118
+ + E ++ G++D +G++ + L L RA AV ARGI
Sbjct: 487 DLDNKGKRDLDRLIEFMEENPGRRLVLMGYSDSIGAKLKNTQLSLNRAKAVEKELQARGI 546
Query: 119 SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
M V G+ +P +E +NRR V+L
Sbjct: 547 GV--MAVEGLGEALPVANNDNESGRERNRRVEVWL 579
>gi|293369282|ref|ZP_06615869.1| OmpA family protein [Bacteroides ovatus SD CMC 3f]
gi|292635612|gb|EFF54117.1| OmpA family protein [Bacteroides ovatus SD CMC 3f]
Length = 256
Score = 67.9 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 46/127 (36%), Gaps = 6/127 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
L + ++ D + F + S + + L L ++ D D IEGH D
Sbjct: 111 TDELTVREKDGKVYVAMSDKLLFQSGSARLDKRGEEALGKLAEVLNKQTDIDVFIEGHTD 170
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ L + RA +V + + +++ + G+ MP + +K
Sbjct: 171 NKPINTVQFKDNWDLSVIRATSVVRILIKNYNVNPLQIQPSGRGEYMPVDDNETIEGRSK 230
Query: 146 NRRAIVF 152
NRR +
Sbjct: 231 NRRTEII 237
>gi|312130253|ref|YP_003997593.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132]
gi|311906799|gb|ADQ17240.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132]
Length = 657
Score = 67.9 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYA 108
+++++D IRP L L L+ + + H D S ++ L RRA +
Sbjct: 544 ENIYYDLDKADIRPDAAIELDKLVQILKDNPGLKIELGSHTDARASEIYNLRLSQRRAES 603
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGH-DEDAYAKNRRAIVFL 153
NY V +GIS R++ YG+ + E + +NRR +
Sbjct: 604 AINYIVNKGISRERLEARGYGESELIIPNAKTEAEHQQNRRTEFKV 649
>gi|159186121|ref|NP_356322.2| OmpA-like porin [Agrobacterium tumefaciens str. C58]
gi|159141255|gb|AAK89107.2| OmpA-like porin [Agrobacterium tumefaciens str. C58]
Length = 501
Score = 67.9 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 44/131 (33%), Gaps = 5/131 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ ++ + + + + +S F T S + P ++ +G L ++
Sbjct: 341 QPEVDKKLVTLADVNGRLRVRINNSGLFTTGSADVSPQFRDLIQRIGGALAAEKFRAVVI 400
Query: 87 GHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
G+ D + S+ L RA AV + ++ + P E+
Sbjct: 401 GYTDTVPIKTVEFPSNWHLSEARAKAVGDIL-SQFTGPDAILTEGRADSDPIADNKTEEG 459
Query: 143 YAKNRRAIVFL 153
NRR + +
Sbjct: 460 RQINRRTEIMV 470
>gi|291336864|gb|ADD96396.1| OmpA/MotB domain containing protein [uncultured organism
MedDCM-OCT-S09-C206]
Length = 211
Score = 67.9 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 40/124 (32%), Gaps = 5/124 (4%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+ ++ +VG F + + + ++L + + GH D++
Sbjct: 86 VEVEQRDDKVFITVGSGGAFPSGTADLTEEAQRILDRISLAAMSPKSTITVTGHTDDVPI 145
Query: 95 RNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
+N+ R + V I R+ S G+ P ++NRR
Sbjct: 146 KNAQFRDNWDLAAGRASSVVQAIQRTGLIDGDRLSAVSKGETAPLADNATAAGRSENRRI 205
Query: 150 IVFL 153
+ +
Sbjct: 206 EIEI 209
>gi|46812309|gb|AAT02227.1| outer membrane protein A precursor [Shigella boydii]
Length = 346
Score = 67.9 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 53/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P L L S L + D ++ G+ D +GS + L
Sbjct: 216 TLKSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSE 275
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RRA +V +Y +++GI ++ G+ P + A +RR + +K
Sbjct: 276 RRAQSVVDYLISKGIPVDKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVK 335
Query: 155 GCR 157
G +
Sbjct: 336 GIK 338
>gi|38327415|gb|AAR17735.1| motility protein B [Bdellovibrio bacteriovorus]
Length = 248
Score = 67.9 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 6/116 (5%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSS 98
++ S FF S ++P ++ L + L+ H +IEGH D+L S+
Sbjct: 125 GVRIALAASTFFQEGSAKLKPEALKXLDKV-DVLKTHKKRIIIEGHTDDLPIAGTLFPSN 183
Query: 99 IALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA AV Y V + R SYG + P V ++ A NRR +F+
Sbjct: 184 WELAGGRASAVVRYLVKVHQMDPKRFVSLSYGDQKPVVPNDSDEHRAMNRRIEIFI 239
>gi|330893498|gb|EGH26159.1| ompA family protein [Pseudomonas syringae pv. mori str. 301020]
Length = 77
Score = 67.9 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 36/70 (51%)
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
I G+ D GSR ++ L +RA +V Y ++G+ S + V G + P D + A
Sbjct: 1 IVGYTDSTGSRQHNMDLSQQRAQSVATYLTSQGVDQSHLSVRGAGPDQPIASNADVNGRA 60
Query: 145 KNRRAIVFLK 154
+NRR V LK
Sbjct: 61 QNRRVEVNLK 70
>gi|259090535|gb|ACV91890.1| OprL [Pseudomonas fluorescens]
gi|259090539|gb|ACV91892.1| OprL [Pseudomonas fluorescens]
gi|259090545|gb|ACV91895.1| OprL [Pseudomonas fluorescens]
gi|259090553|gb|ACV91899.1| OprL [Pseudomonas fluorescens]
gi|259090561|gb|ACV91903.1| OprL [Pseudomonas fluorescens]
gi|259090573|gb|ACV91909.1| OprL [Pseudomonas fluorescens]
gi|259090575|gb|ACV91910.1| OprL [Pseudomonas fluorescens]
gi|259090581|gb|ACV91913.1| OprL [Pseudomonas fluorescens]
Length = 157
Score = 67.9 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 67/128 (52%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+ G +T + SL E+ + + +F+ S ++P ++ L L
Sbjct: 30 AGEGAAVDPNAGYGANTGAVDGSLSEEAALRAITTFYFEYDSSDLKPEAMRALDVHAKDL 89
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ + ++EG+ DE G+R ++ALG RRA AV Y V +G+S +++++ SYG+E P
Sbjct: 90 KGNGARVVLEGNTDERGTREYNMALGERRAKAVQRYLVLQGVSPAQLELVSYGEERPVAT 149
Query: 137 GHDEDAYA 144
G+D ++A
Sbjct: 150 GNDXQSWA 157
>gi|258622021|ref|ZP_05717050.1| sodium-type flagellar protein MotY [Vibrio mimicus VM573]
gi|258627110|ref|ZP_05721906.1| sodium-type flagellar protein MotY [Vibrio mimicus VM603]
gi|262165241|ref|ZP_06032978.1| sodium-type flagellar protein MotY precursor [Vibrio mimicus VM223]
gi|258580628|gb|EEW05581.1| sodium-type flagellar protein MotY [Vibrio mimicus VM603]
gi|258585774|gb|EEW10494.1| sodium-type flagellar protein MotY [Vibrio mimicus VM573]
gi|262024957|gb|EEY43625.1| sodium-type flagellar protein MotY precursor [Vibrio mimicus VM223]
Length = 294
Score = 67.9 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
S + A + L+ + ++ + L+ + D + N+S L +RA + YF
Sbjct: 191 DSVELNKASQKRLAQIAEYVRYNSDIDLVLVSTYTDSTDTNNNSQNLSEKRAEVLREYFK 250
Query: 115 ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ G+ R++V YGK P KNRR ++ L
Sbjct: 251 SIGLPEDRIQVQGYGKRRPIADNASPIGKDKNRRVVISL 289
>gi|103488577|ref|YP_618138.1| OmpA/MotB [Sphingopyxis alaskensis RB2256]
gi|98978654|gb|ABF54805.1| OmpA/MotB [Sphingopyxis alaskensis RB2256]
Length = 230
Score = 67.9 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 54/134 (40%), Gaps = 2/134 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ + T ++ +Q ++ V FD +S ++ L N+ + L ++
Sbjct: 85 QEKKLRERTAGTGIDVERQGDQLVLNMPGDVTFDLNSAMVKSQFRSALDNVAATLAEYPS 144
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS-VYGHD 139
+ GH D GS + L RRA +V +Y RGI +RM YG+
Sbjct: 145 TYIDVYGHTDSTGSETYNQGLSERRAASVADYLAGRGIQRARMATLGYGESQLKCAPERT 204
Query: 140 EDAYAKNRRAIVFL 153
E Y NRR + +
Sbjct: 205 EADYQCNRRVEIRI 218
>gi|160884848|ref|ZP_02065851.1| hypothetical protein BACOVA_02838 [Bacteroides ovatus ATCC 8483]
gi|156109883|gb|EDO11628.1| hypothetical protein BACOVA_02838 [Bacteroides ovatus ATCC 8483]
Length = 280
Score = 67.9 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 46/127 (36%), Gaps = 6/127 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
L + ++ D + F + S + + L L ++ D D IEGH D
Sbjct: 135 TDELTVREKDGKVYVAMSDKLLFQSGSARLDKRGEEALGKLAEVLNKQTDIDVFIEGHTD 194
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ L + RA +V + + +++ + G+ MP + +K
Sbjct: 195 NKPINTVQFKDNWDLSVIRATSVVRILIKNYNVNPLQIQPSGRGEYMPIDDNETIEGRSK 254
Query: 146 NRRAIVF 152
NRR +
Sbjct: 255 NRRTEII 261
>gi|332283816|ref|YP_004415727.1| OmpA/MotB domain protein [Pusillimonas sp. T7-7]
gi|330427769|gb|AEC19103.1| OmpA/MotB domain protein [Pusillimonas sp. T7-7]
Length = 223
Score = 67.9 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 10/116 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLS----NLGSWLEKHDCDFLIEGHADELG------SR 95
+ SV F +S ++ VL L +L+ HD ++ G D+
Sbjct: 85 IGISGSVLFALNSAQLQAEGHDVLESLVAPLSDYLQSHDQILMVSGFTDDQQVLQGNRRF 144
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ + L +RA V +A GI +S + ++G E P DE AKNRR +
Sbjct: 145 DDNWDLSAQRALTVTRALIAAGIPSSSVFAAAFGAEQPVASNADEQGRAKNRRVEI 200
>gi|269955512|ref|YP_003325301.1| OmpA/MotB domain-containing protein [Xylanimonas cellulosilytica
DSM 15894]
gi|269304193|gb|ACZ29743.1| OmpA/MotB domain protein [Xylanimonas cellulosilytica DSM 15894]
Length = 217
Score = 67.9 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 52/146 (35%), Gaps = 9/146 (6%)
Query: 14 TMMSISGIDNLDT--KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+++ D T S TV ++ ++ + F ++ P ++
Sbjct: 70 ATFALATEDATFTLRPDDSTITVETRQETEDDTVVTLTSDLLFGFGESALTPEAQAAVAE 129
Query: 72 LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
L + + D ++GH D +GS ++ L +RA AV + + V +G+
Sbjct: 130 LATTI-PQDAAVRVDGHTDAVGSDELNLTLSEQRADAVAAVL-SGARPDLVLTVEGHGEA 187
Query: 132 MPSVYG-----HDEDAYAKNRRAIVF 152
P + A NRR V
Sbjct: 188 DPVASNEEGGVDNPAGRALNRRVEVT 213
>gi|114797840|ref|YP_758889.1| OmpA family protein [Hyphomonas neptunium ATCC 15444]
gi|114738014|gb|ABI76139.1| ompA family protein [Hyphomonas neptunium ATCC 15444]
Length = 180
Score = 67.9 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 42/115 (36%), Positives = 64/115 (55%), Gaps = 1/115 (0%)
Query: 34 VLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADEL 92
E F +VG+ V+FD Y + D ++L +W + L+ G+ADE
Sbjct: 54 SSITPGSLEDFRVNVGERVYFDLDQYGLDSDDQEILKRQAAWLNAYPNVRVLVAGNADER 113
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
G+R ++ALG RRA A +Y V+ G+SASR+ SYGKE P G +++++A NR
Sbjct: 114 GTREYNLALGERRASAAKDYLVSLGVSASRVDTVSYGKERPVAGGSNDESWAMNR 168
>gi|310822107|ref|YP_003954465.1| peptidoglycan-associated lipoprotein (pal) family protein
[Stigmatella aurantiaca DW4/3-1]
gi|309395179|gb|ADO72638.1| Peptidoglycan-associated lipoprotein (Pal) family protein
[Stigmatella aurantiaca DW4/3-1]
Length = 177
Score = 67.9 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 9/162 (5%)
Query: 6 IFIILSAITMMSISGIDNLDTKISSPDTVL--------NESSLQEQFSSSVGDSVFFDTS 57
I + SA S + + N + + +S ++++
Sbjct: 11 IALSASACATKSAATVSNEGLSGPTTPRPPPAPVAEKPSVPDEDADGASLAFGPIYYELD 70
Query: 58 SYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
S ++RP + L L + I GH ELG+ ++ALG RRA +Y V
Sbjct: 71 STTLRPESRETLERLAEALRRRPGARVTISGHTCELGTTEYNLALGQRRAAMAKDYLVKL 130
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
G+ + V SYG+E P+V G E+ +++NRR+ L +A
Sbjct: 131 GVGPGNVAVVSYGEESPAVLGSGEEVWSRNRRSEFNLSVAQA 172
>gi|295085810|emb|CBK67333.1| Flagellar motor protein [Bacteroides xylanisolvens XB1A]
Length = 256
Score = 67.9 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 46/127 (36%), Gaps = 6/127 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
L + ++ D + F + S + + L L ++ D D IEGH D
Sbjct: 111 TDELTVREKDGKVYVAMSDKLLFQSGSARLDKRGEEALGKLAEVLNKQTDIDVFIEGHTD 170
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ L + RA +V + + +++ + G+ MP + +K
Sbjct: 171 NKPINTVQFKDNWDLSVIRATSVVRILIKNYNVNPLQIQPSGRGEYMPIDDNETIEGRSK 230
Query: 146 NRRAIVF 152
NRR +
Sbjct: 231 NRRTEII 237
>gi|254458914|ref|ZP_05072337.1| OmpA/MotB [Campylobacterales bacterium GD 1]
gi|207084185|gb|EDZ61474.1| OmpA/MotB [Campylobacterales bacterium GD 1]
Length = 184
Score = 67.9 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 40/182 (21%), Positives = 70/182 (38%), Gaps = 29/182 (15%)
Query: 1 MQYSTIFIILSAITMMSISG------------------IDNLDTKISSPDTVLNESSLQE 42
M+ I+ A+ + S ++ + T+ S + S E
Sbjct: 1 MKSIVFSSIVMALLVFSGCADKKPAVDEKVKEEVVAQEVEAVKTETVSAEDATVGESSME 60
Query: 43 Q---------FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK--HDCDFLIEGHADE 91
+ +V+FD + IR ++N + +EG+ DE
Sbjct: 61 KSDSNEMKMANLEKELSTVYFDFDKFVIRSDMESKVTNSATVANNTAKAFTVKLEGNCDE 120
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
GS + ALGL+RA V +A G++ +R+ + SYG+ P +D ++KNRR
Sbjct: 121 WGSDEYNFALGLKRASTVKKALMAEGVNETRITMVSYGESNPVCNDKTQDCWSKNRRVDF 180
Query: 152 FL 153
L
Sbjct: 181 KL 182
>gi|89068018|ref|ZP_01155435.1| OmpA family protein [Oceanicola granulosus HTCC2516]
gi|89046257|gb|EAR52314.1| OmpA family protein [Oceanicola granulosus HTCC2516]
Length = 218
Score = 67.9 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 61/138 (44%), Gaps = 4/138 (2%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
G ++ D L ++F+ V V F S ++ P +L SW +
Sbjct: 39 GAATVNNIAVQADGTNYVLILAQRFADEVPSMVNFAFDSANLGPEARAILDVQASWINQF 98
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV-TSYGKEMPSVYG 137
+ F + GH D +GS + LG RRA AV Y +RG+S R++ S+G+ P V
Sbjct: 99 PELRFSVYGHTDLVGSDAYNRRLGERRARAVVAYLASRGVSTDRLEALVSFGETQPLVLT 158
Query: 138 HDEDAYAKNRRAIVFLKG 155
D + NRR + + G
Sbjct: 159 QDPE--RANRRTVTQVSG 174
>gi|302337004|ref|YP_003802210.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293]
gi|301634189|gb|ADK79616.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293]
Length = 405
Score = 67.9 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 50/134 (37%), Gaps = 2/134 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
D L+ +I+ + + +++ F S P ++ L + S L+ +
Sbjct: 269 DELERRIAENGIPDAGVRVGDDGVIISLENIQFKADSAVPLPGEMDKLKRVVSLLKLYPD 328
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHD 139
L+ GH G+ +AL L RA V + I R+ + G P
Sbjct: 329 RDILVTGHTALAGTAEGRMALSLERARTVAAFLKDELNIDDDRLMIEGKGAGAPVAPNDT 388
Query: 140 EDAYAKNRRAIVFL 153
E+ KNRR + +
Sbjct: 389 EEGKRKNRRVEITI 402
>gi|288942520|ref|YP_003444760.1| OmpA/MotB domain-containing protein [Allochromatium vinosum DSM
180]
gi|288897892|gb|ADC63728.1| OmpA/MotB domain protein [Allochromatium vinosum DSM 180]
Length = 279
Score = 67.9 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 47/133 (35%), Gaps = 5/133 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
+ ++ +++ +Q + + F ++S I L + L + + LI GH D
Sbjct: 130 AEGLIEINTIDDQVVIRIREKGSFPSASARIDTPFKAALMKIAEALNQVEGRILIAGHTD 189
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGIS-----ASRMKVTSYGKEMPSVYGHDEDAYAK 145
++ + A R+++ ++G P D A
Sbjct: 190 DVPIETLEFPSNWVLSAARAAAVAHTMTQVGGIAPERVEIRAHGDNRPVDTNETTDGRAN 249
Query: 146 NRRAIVFLKGCRA 158
NRR + + G R+
Sbjct: 250 NRRVEIIVLGERS 262
>gi|302343737|ref|YP_003808266.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075]
gi|301640350|gb|ADK85672.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075]
Length = 245
Score = 67.5 bits (163), Expect = 5e-10, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 47/130 (36%), Gaps = 6/130 (4%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHA 89
S L ++ + + F + P ++ + + S L + +EGH
Sbjct: 110 SLQQGLQVRQEPRGTVITLANDLLFAPGKAELSPQAVESIKKIASVLAHGSANISVEGHT 169
Query: 90 DELGS-----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAY 143
D + +L L RA+AV + G+ R+++ + G P V
Sbjct: 170 DASAPGAGSGFGDNWSLSLARAHAVLLRLIDPGGLKPDRLRLAALGDSRPLVPNDTPQRR 229
Query: 144 AKNRRAIVFL 153
A NRR + +
Sbjct: 230 AMNRRTEIVV 239
>gi|229837675|ref|ZP_04457837.1| putative OmpA-family membrane protein [Yersinia pestis Pestoides A]
gi|229704363|gb|EEO91374.1| putative OmpA-family membrane protein [Yersinia pestis Pestoides A]
Length = 513
Score = 67.5 bits (163), Expect = 5e-10, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 40/103 (38%), Gaps = 2/103 (1%)
Query: 53 FFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FD +++ ++L L K ++ GH D G ++ L L+RA A+ +
Sbjct: 382 LFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTDITGDAQANHILSLKRAEALRD 441
Query: 112 Y-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +S + V YG P D NRR + L
Sbjct: 442 WMLSTSDVSPTCFAVQGYGATRPIADNDTPDGRVLNRRVEISL 484
>gi|209809438|ref|YP_002264976.1| outer membrane protein, OmpA family [Aliivibrio salmonicida
LFI1238]
gi|208011000|emb|CAQ81413.1| outer membrane protein, OmpA family [Aliivibrio salmonicida
LFI1238]
Length = 307
Score = 67.5 bits (163), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/160 (19%), Positives = 64/160 (40%), Gaps = 6/160 (3%)
Query: 1 MQYSTIFIILSAITMMSIS-----GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFD 55
M ++ + ++ S +N+D L L Q + + F+
Sbjct: 4 MTMKSLLLGFGFFSLFGCSTDTYVSKENIDKYDERVQKFLIAECLVPQREIQMAVAEHFE 63
Query: 56 TSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA 115
++ D L+ + +++ I GH D GS + + L +RA ++ Y
Sbjct: 64 FDKSELKETDYASLNQFVNSIKRFKGRIAIVGHTDYQGSVSYNEELSRQRAESIKAYLSE 123
Query: 116 RGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ + ++ +V YG++ P + G +A A NRRA + +
Sbjct: 124 KLVVSNYEWEVKYYGEKRPFIKGRSLEANAANRRAYLVFE 163
Score = 54.0 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F ++ D L L L LI GH D GS++ + L R+ AV NY
Sbjct: 190 HFAFDKDELQNTDKVELDELALKLTGLTGRILIAGHTDYQGSQSYNEQLAKERSMAVQNY 249
Query: 113 FVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ + + ++ S+G++ P + A A NRRA V K
Sbjct: 250 LKTKVDPSQFIWEIKSFGEDSPIIEERSLKANAANRRAFVVFK 292
>gi|212219430|ref|YP_002306217.1| peptidoglycan-associated lipoprotein [Coxiella burnetii CbuK_Q154]
gi|215918885|ref|NP_819143.2| putative peptidoglycan-associated lipoprotein [Coxiella burnetii
RSA 493]
gi|206583770|gb|AAO89657.2| peptidoglycan-associated lipoprotein [Coxiella burnetii RSA 493]
gi|212013692|gb|ACJ21072.1| peptidoglycan-associated lipoprotein [Coxiella burnetii CbuK_Q154]
Length = 195
Score = 67.5 bits (163), Expect = 5e-10, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 73/178 (41%), Gaps = 26/178 (14%)
Query: 1 MQY--STIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQ--------------- 43
M + + A+ +++SG + ++ + + + Q
Sbjct: 14 MNNLVKNSGLAVIALATLNLSGCKHHPAGANAATGLSDGTGAQAYALAEGKGYQGQLKKD 73
Query: 44 --------FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGS 94
+ + +FD S +R D+ + ++L H +EG+ D GS
Sbjct: 74 SEGRIINPLVAPANQTYYFDFDSTQLRSLDLGAIRVQANYLATHSTAKVRLEGNTDNRGS 133
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
R +I LG RR AV G++ ++ + SYGKE P+V G++E+A+ NRR +
Sbjct: 134 REYNIGLGWRRDQAVARILEQEGVAPKQIDMVSYGKERPAVMGNNENAWRLNRRVNLI 191
>gi|206577508|ref|YP_002239403.1| outer membrane protein A [Klebsiella pneumoniae 342]
gi|288936252|ref|YP_003440311.1| OmpA domain protein transmembrane region-containing protein
[Klebsiella variicola At-22]
gi|290510692|ref|ZP_06550062.1| OOP family OmpA-OmpF porin [Klebsiella sp. 1_1_55]
gi|206566566|gb|ACI08342.1| outer membrane protein A [Klebsiella pneumoniae 342]
gi|288890961|gb|ADC59279.1| OmpA domain protein transmembrane region-containing protein
[Klebsiella variicola At-22]
gi|289777408|gb|EFD85406.1| OOP family OmpA-OmpF porin [Klebsiella sp. 1_1_55]
Length = 350
Score = 67.5 bits (163), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L L + ++ D ++ G D +GS + L
Sbjct: 220 TLKSDVLFNFNKATLKPEGQQALDQLYTQLSNMDPKDGSAVVMGFTDRIGSEAYNQQLSE 279
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
+RA +V +Y VA+GI A ++ GK P + A A +RR + +K
Sbjct: 280 KRAQSVVDYLVAKGIPAGKISARGMGKSNPVTGNTCDNVKARAALIDCLAPDRRVEIEVK 339
Query: 155 GCR 157
G +
Sbjct: 340 GYK 342
>gi|229485743|sp|P0C8Z2|OMPA_ESCFE RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II
gi|146991|gb|AAA24236.1| outer membrane protein II [Escherichia fergusonii]
gi|146999|gb|AAA24240.1| outer membrane protein II [Escherichia fergusonii]
Length = 243
Score = 67.5 bits (163), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 59/156 (37%), Gaps = 12/156 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + +S + + ++ V F+ + +++P L
Sbjct: 87 GLLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLKSDVLFNFNKATLKPEGQAALDQ 146
Query: 72 LGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L S L + D ++ G+ D +GS + L RRA +V +Y +++GI A ++
Sbjct: 147 LYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRAQSVVDYLISKGIPADKISARGM 206
Query: 129 GKEMPS--VYGHDEDAYAK-------NRRAIVFLKG 155
G+ P + A +RR + +KG
Sbjct: 207 GESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKG 242
>gi|294644876|ref|ZP_06722614.1| OmpA family protein [Bacteroides ovatus SD CC 2a]
gi|294808230|ref|ZP_06766993.1| OmpA family protein [Bacteroides xylanisolvens SD CC 1b]
gi|292639770|gb|EFF58050.1| OmpA family protein [Bacteroides ovatus SD CC 2a]
gi|294444557|gb|EFG13261.1| OmpA family protein [Bacteroides xylanisolvens SD CC 1b]
Length = 256
Score = 67.5 bits (163), Expect = 5e-10, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 46/127 (36%), Gaps = 6/127 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
L + ++ D + F + S + + L L ++ D D IEGH D
Sbjct: 111 TDELTVREKDGKVYVAMSDKLLFQSGSARLDKRGEEALGKLAEVLNKQTDIDVFIEGHTD 170
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ L + RA +V + + +++ + G+ MP + +K
Sbjct: 171 NKPINTVQFKDNWDLSVIRATSVVRILIKNYNVNPLQIQPSGRGEYMPVDDNETIEGRSK 230
Query: 146 NRRAIVF 152
NRR +
Sbjct: 231 NRRTEII 237
>gi|114047938|ref|YP_738488.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-7]
gi|113889380|gb|ABI43431.1| OmpA/MotB domain protein [Shewanella sp. MR-7]
Length = 290
Score = 67.5 bits (163), Expect = 5e-10, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 36/72 (50%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
L++ + D G R+ + + +RA +V ++FVA GI R+ +G+ D +
Sbjct: 215 VLVDAYTDSYGGRSVNQKVSDKRAESVKDFFVASGIPQDRIVTVGHGERRHVASNDDIEE 274
Query: 143 YAKNRRAIVFLK 154
A NRR ++ +
Sbjct: 275 RALNRRVVIRIS 286
>gi|146983|gb|AAA24232.1| outer membrane protein II [Escherichia fergusonii]
Length = 243
Score = 67.5 bits (163), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 59/156 (37%), Gaps = 12/156 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + +S + + ++ V F+ + +++P L
Sbjct: 87 GLLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLKSDVLFNFNKATLKPEGQAALDQ 146
Query: 72 LGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L S L + D ++ G+ D +GS + L RRA +V +Y +++GI A ++
Sbjct: 147 LYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRAQSVVDYLISKGIPADKISARGM 206
Query: 129 GKEMPS--VYGHDEDAYAK-------NRRAIVFLKG 155
G+ P + A +RR + +KG
Sbjct: 207 GESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKG 242
>gi|261251019|ref|ZP_05943593.1| outer membrane protein A precursor [Vibrio orientalis CIP 102891]
gi|260937892|gb|EEX93880.1| outer membrane protein A precursor [Vibrio orientalis CIP 102891]
Length = 305
Score = 67.5 bits (163), Expect = 5e-10, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 65/163 (39%), Gaps = 9/163 (5%)
Query: 1 MQYS-TIFIILSAITMMSISGIDN--LDTKISSPDTVLNES-----SLQEQFSSSVGDSV 52
M+ + L+ ++S D I L E + + + +
Sbjct: 1 MKNRYNASMTLAVALVVSACSTDTYVSKENIDKFGDPLVEKFLIRECIVPERDIRIAMAS 60
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FD ++ D Q + L S + K I GH D GS + ++ L LRRA AV Y
Sbjct: 61 HFDFDKSELKEQDKQSIDRLISSIRKLHGQIAIVGHTDYQGSDDYNVKLSLRRAEAVKAY 120
Query: 113 FVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ ++ +V YG+ P V G + A A+NRRA V +
Sbjct: 121 MQTQLDASRYDWEVKYYGESKPLVEGQSKQANAENRRAYVVFE 163
Score = 54.8 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 51/130 (39%), Gaps = 1/130 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI 85
+ + + + Q V + F ++P D L + L + LI
Sbjct: 163 EQTQTQQENEFCAPPEPQRKVFVAMTSHFGFDEAKLKPIDKTSLDEFANQLNGLNGRVLI 222
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYA 144
GH D GS + + L +RA +V Y + + +V S+G+ P D DA A
Sbjct: 223 AGHTDYQGSISYNERLAEQRAESVLQYLQTKLDPNQFVWEVKSFGELNPVTQEQDLDANA 282
Query: 145 KNRRAIVFLK 154
NRRA + K
Sbjct: 283 LNRRAFIVFK 292
>gi|154174275|ref|YP_001408803.1| Omp18 [Campylobacter curvus 525.92]
gi|112803716|gb|EAU01060.1| Omp18 [Campylobacter curvus 525.92]
Length = 168
Score = 67.5 bits (163), Expect = 5e-10, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 59/138 (42%), Gaps = 4/138 (2%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+ + ++L S V + V+FD ++I+ +S + +
Sbjct: 30 ANSNQTSDSNMGMSDADRLAALIANIESQVKN-VYFDFDKFNIKADQQGTVSANAAIFNQ 88
Query: 79 ---HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+EG+ DE G+ + ALGL+RA + + V G+SA R+ V S+G+ P
Sbjct: 89 ADAQALSIKVEGNCDEWGTDEYNYALGLKRAKSTKDALVRNGVSADRIAVVSFGESNPVC 148
Query: 136 YGHDEDAYAKNRRAIVFL 153
+ A+NRRA +
Sbjct: 149 TDKTKACDAQNRRAEFKV 166
>gi|187925731|ref|YP_001897373.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
gi|187716925|gb|ACD18149.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
Length = 584
Score = 67.5 bits (163), Expect = 5e-10, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 48/128 (37%), Gaps = 8/128 (6%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-----DCDFL 84
+PD+ + + + + V + F ++S + + + L L
Sbjct: 457 APDSSCAAADVVKVLNLQV---INFASASAHVPASAVDDLKQSARVLNACAGNGKTARLE 513
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+ G++D +G +++ L +RA AV Y V G+ A + YG+ P
Sbjct: 514 VAGYSDNVGGEQANLQLSKQRANAVRAYLVKTGVPADSLLAQGYGQARPVASNDTASGRF 573
Query: 145 KNRRAIVF 152
NRR
Sbjct: 574 ANRRIEFV 581
>gi|282880441|ref|ZP_06289148.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1]
gi|281305544|gb|EFA97597.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1]
Length = 298
Score = 67.5 bits (163), Expect = 5e-10, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 49/119 (41%), Gaps = 11/119 (9%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADE---------LGSR 95
S+ D++ + T+SY I + LS + ++ + D L+EG+ D + +
Sbjct: 160 ISLADNMLYKTASYEINDRAAETLSKIAKIIMDYKEYDVLVEGNTDNVPVNPNSPLMKNI 219
Query: 96 NSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L RA +V Y + RM G+ P + E +NRR + +
Sbjct: 220 RNNWDLSTLRASSVVQYLQKNYGVDPKRMTAGGRGEYNPLTSNNTELGRQRNRRTQIII 278
>gi|85709715|ref|ZP_01040780.1| outer membrane protein [Erythrobacter sp. NAP1]
gi|85688425|gb|EAQ28429.1| outer membrane protein [Erythrobacter sp. NAP1]
Length = 231
Score = 67.5 bits (163), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 58/132 (43%), Gaps = 3/132 (2%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDF 83
D ++ + E Q+ + D V F + S +I P L+++ + ++ +
Sbjct: 86 DEELEGTGVDVEEIGDQDAILVRLPDGVTFASGSATINPGFYDSLNSVANSLIQYPNSLV 145
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE--MPSVYGHDED 141
+ G D GS + + L +RA AV +Y +RG++ SR+ YG+ + D
Sbjct: 146 DVYGFTDTTGSDSLNQRLSEQRAQAVADYLASRGVARSRLATRGYGESYDYLRIKTADGV 205
Query: 142 AYAKNRRAIVFL 153
A NRR + +
Sbjct: 206 AEPLNRRVEIKI 217
>gi|170698906|ref|ZP_02889966.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
gi|170136159|gb|EDT04427.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
Length = 85
Score = 67.5 bits (163), Expect = 5e-10, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 35/83 (42%)
Query: 71 NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
+ + + I GH D G+R S IAL RA AV Y + + I +M T G
Sbjct: 1 MAAALSKLQNRTVDIIGHTDNSGNRTSHIALSQARADAVKGYLITKSIPPQQMTTTGVGP 60
Query: 131 EMPSVYGHDEDAYAKNRRAIVFL 153
+ P D A+NRR +
Sbjct: 61 DQPIAPNDTADGRARNRRIDFRV 83
>gi|220927721|ref|YP_002504630.1| OmpA/MotB domain protein [Clostridium cellulolyticum H10]
gi|219998049|gb|ACL74650.1| OmpA/MotB domain protein [Clostridium cellulolyticum H10]
Length = 259
Score = 67.5 bits (163), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 53/140 (37%), Gaps = 12/140 (8%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHAD 90
+ + + ++ + + F + S I P D + +G + + + +EGH D
Sbjct: 111 GNVAVTMQERGIVVTINEKILFKSGSAIIEPKDQDTVIKIGKDILSKIPNKHIRVEGHTD 170
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ S+ L RA V V +G I+ + YG+ P V + AK
Sbjct: 171 NVPMKSTLYASNWELSAGRAINVLKLLVEKGGINPKMIHPVPYGEYSPLVPNTTDANRAK 230
Query: 146 NRRAIVFL-----KGCRANT 160
NRR + + ANT
Sbjct: 231 NRRVDIVILRDSSSKGEANT 250
>gi|288225941|gb|ADC44455.1| OmpA [Candidatus Erwinia dacicola]
gi|288225945|gb|ADC44457.1| OmpA [Candidatus Erwinia dacicola]
Length = 324
Score = 67.5 bits (163), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L L + L + D ++ G+ D +GS + L
Sbjct: 194 TLKSDVLFNFNKNTLKPEGQQALDQLYTQLSNLDPKDGSVVVLGYTDRIGSEQYNQKLSE 253
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLK 154
+RA +V ++ V++GI AS++ GK P A +RR + +K
Sbjct: 254 KRAQSVVDHLVSKGIPASKIYARGKGKSNPIIGSTCDSVKGRNALIDCLAPDRRVEIEVK 313
Query: 155 GCR 157
G +
Sbjct: 314 GIK 316
>gi|269103827|ref|ZP_06156524.1| putative OmpA family protein [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268163725|gb|EEZ42221.1| putative OmpA family protein [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 229
Score = 67.5 bits (163), Expect = 5e-10, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 52/135 (38%), Gaps = 1/135 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
+ + + + + ++ + + F ++ + L N+ ++++
Sbjct: 92 VQAAKLRKQLASSGITVTRNGNNIVLNMPNEITFGVDQTTLNQRAMNALHNVALVAKEYN 151
Query: 81 -CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ G D G+ + + L RA V NY + +G++A+R+ G+ P
Sbjct: 152 KTQLNVYGFTDSTGAASYNQRLSQVRAAEVGNYLIRQGVAANRVVSQGMGEASPIATNST 211
Query: 140 EDAYAKNRRAIVFLK 154
A+NRR + +
Sbjct: 212 AAGRAENRRVQIVMS 226
>gi|237722039|ref|ZP_04552520.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|298483221|ref|ZP_07001400.1| flagellar motor protein MotB [Bacteroides sp. D22]
gi|229448908|gb|EEO54699.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|298270538|gb|EFI12120.1| flagellar motor protein MotB [Bacteroides sp. D22]
Length = 280
Score = 67.5 bits (163), Expect = 5e-10, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 46/127 (36%), Gaps = 6/127 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
L + ++ D + F + S + + L L ++ D D IEGH D
Sbjct: 135 TDELTVREKDGKVYVAMSDKLLFQSGSARLDKRGEEALGKLAEVLNKQTDIDVFIEGHTD 194
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ L + RA +V + + +++ + G+ MP + +K
Sbjct: 195 NKPINTVQFKDNWDLSVIRATSVVRILIKNYNVNPLQIQPSGRGEYMPIDDNETIEGRSK 254
Query: 146 NRRAIVF 152
NRR +
Sbjct: 255 NRRTEII 261
>gi|149925997|ref|ZP_01914260.1| hypothetical protein LMED105_03075 [Limnobacter sp. MED105]
gi|149825285|gb|EDM84496.1| hypothetical protein LMED105_03075 [Limnobacter sp. MED105]
Length = 454
Score = 67.5 bits (163), Expect = 5e-10, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 34/105 (32%), Gaps = 5/105 (4%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSIALGLRRAYA 108
F++ S + + I ++ + L H + G+ D S+ L RA
Sbjct: 347 LFNSGSAELNDSAIPLVEKVARKLALHPGQITVTGYTDNQPIRSIRFPSNWQLSAERAEH 406
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V + + + G P A+NRR + L
Sbjct: 407 VGQRIATFLPNTA-IATEGAGAANPIAPNDSAQGRARNRRVEIML 450
>gi|116326910|ref|YP_796630.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
L550]
gi|116332434|ref|YP_802152.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
JB197]
gi|116119654|gb|ABJ77697.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
L550]
gi|116126123|gb|ABJ77394.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
JB197]
Length = 545
Score = 67.5 bits (163), Expect = 5e-10, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 46/105 (43%), Gaps = 1/105 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYA 108
DS+ F SY I +L NL S+L ++ I GH D G +I L RA A
Sbjct: 438 DSIHFALGSYEILEDSFPILENLNSYLRENPGIKIRIIGHTDLNGDYQDNIILSHNRANA 497
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V +Y V +GI + R+ G P + D KNRR +
Sbjct: 498 VKDYLVRKGIDSGRIVTDGKGSSEPIIPRKDPKTDYKNRRTEFQI 542
>gi|114046783|ref|YP_737333.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-7]
gi|113888225|gb|ABI42276.1| OmpA/MotB domain protein [Shewanella sp. MR-7]
Length = 191
Score = 67.5 bits (163), Expect = 5e-10, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 40/105 (38%), Gaps = 2/105 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
V+F+ + + + + L+ + + + GH D +G+ + L LRRA V
Sbjct: 84 IVYFEFAIAEVDLSQWKALALVKAFLDANTETRLTLVGHTDIVGTPEFNYQLSLRRAQNV 143
Query: 110 FNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V G + +R V G P H + NRR +
Sbjct: 144 KRILVEDYGFNPNRFTVIGKGISEPVADNHSSEGRRLNRRVQFIV 188
>gi|110639062|ref|YP_679271.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
gi|110281743|gb|ABG59929.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
Length = 380
Score = 67.5 bits (163), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 51/128 (39%), Gaps = 1/128 (0%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLI 85
K + V + + + V ++ F S + P + L + W+ + D
Sbjct: 251 KPVVIEIVADTAPAYIKVDRVVLKNLLFSQSKSELLPQAAKELDMIAEWMNRETDVRVRF 310
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
GH D G ++ L +R V Y V++GI+A R++ YG P E+
Sbjct: 311 IGHTDNQGDAKLNVLLSEQRVSKVKAYLVSKGIAADRIETVGYGGAFPITDNAFEETRKL 370
Query: 146 NRRAIVFL 153
NRR + +
Sbjct: 371 NRRVEMEI 378
>gi|297564278|ref|YP_003683251.1| OmpA/MotB domain protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296848727|gb|ADH70745.1| OmpA/MotB domain protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 534
Score = 67.5 bits (163), Expect = 5e-10, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 45/117 (38%), Gaps = 7/117 (5%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSN----LGSWLEKHDCDFLIEGHADELGSRNS 97
++ S+ V F+ + V+ L ++ + + GH D +G
Sbjct: 242 DREIISLHSDVMFEFDRSDLTSEAEDVVRRAATSLARNVDPDEPVITVIGHTDSIGDDAY 301
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG---HDEDAYAKNRRAIV 151
+ L ++RA +V + + ++V G+ P D++A A+NRR
Sbjct: 302 NDNLSVQRAESVRDLLAEELGTDYTLEVEGRGEHEPIAREGGPDDDEARARNRRVEF 358
>gi|255023068|ref|ZP_05295054.1| motility protein (flagellar motor rotation) MotB [Listeria
monocytogenes FSL J1-208]
Length = 275
Score = 67.5 bits (163), Expect = 5e-10, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 44/137 (32%), Gaps = 8/137 (5%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--LIEGHA 89
+ E ++ D + F + S + ++ +G + ++ GH
Sbjct: 134 GAKMTTKYSDEGLLITIRDDILFQSGSAELTAGKREIAKEIGELFAQGKGTMEGIVSGHT 193
Query: 90 DELGS----RNSSIALGLRRAYAVFNYFV--ARGISASRMKVTSYGKEMPSVYGHDEDAY 143
D + +S+ L + RA + ++ YG+ P
Sbjct: 194 DNVPISTSIYSSNWELSVARAVNFMEAIIQENNEVNPGEFSARGYGEFRPVAKNDIAANR 253
Query: 144 AKNRRAIVFLKGCRANT 160
KNRR + ++ +T
Sbjct: 254 EKNRRVEIMVRPINRDT 270
>gi|261253096|ref|ZP_05945669.1| outer membrane protein [Vibrio orientalis CIP 102891]
gi|260936487|gb|EEX92476.1| outer membrane protein [Vibrio orientalis CIP 102891]
Length = 204
Score = 67.5 bits (163), Expect = 5e-10, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 51/140 (36%), Gaps = 1/140 (0%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW- 75
++ D + + F SY I P + + +
Sbjct: 48 VVNARDICPGTPIGAQVDNDGCGAAIVEEEQRQLRILFANDSYEINPIFSDQIQTMAQFL 107
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+ I+G+A ++G ++ L +RA+AV + + + R+ + YG+
Sbjct: 108 EKYQSASIQIQGYASKVGDPEYNLELSKKRAHAVEDELLYFEVDPKRVTIVGYGESRLEA 167
Query: 136 YGHDEDAYAKNRRAIVFLKG 155
G DE ++A NRR + G
Sbjct: 168 EGDDETSHALNRRVTATVVG 187
>gi|218662295|ref|ZP_03518225.1| hypothetical protein RetlI_23953 [Rhizobium etli IE4771]
Length = 223
Score = 67.5 bits (163), Expect = 5e-10, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 38/102 (37%), Gaps = 5/102 (4%)
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG-----SRNSSIALGLRRAYAVFN 111
+ +L + + ++GH D + + L RA +V
Sbjct: 119 GQTEMAKLATALLDLAKEIPPEINWVLRVDGHTDNVPLGGTGRYRDNWELSSARATSVVK 178
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ + +G+ A R+ +G+ P G +A A NRR + L
Sbjct: 179 FLIGQGVPADRLVAAGFGEFQPIAPGDTPEARATNRRIELKL 220
>gi|134094541|ref|YP_001099616.1| flagellar motor protein MotD [Herminiimonas arsenicoxydans]
gi|133738444|emb|CAL61489.1| putative flagellar motor protein MotD [Herminiimonas
arsenicoxydans]
Length = 261
Score = 67.5 bits (163), Expect = 5e-10, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 45/126 (35%), Gaps = 4/126 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ + + S + SV F + + L + L K D D +EGH D
Sbjct: 119 EGKVRVTQTNRGVSVEINASVLFAPGEARLSAQSEKALRAVAEVLNKVDNDIQVEGHTDN 178
Query: 92 ----LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
S+ L RA +V F+ G++ R+ +G P + +NR
Sbjct: 179 VPINNAMFPSNWELSAVRASSVVRLFLESGMNEKRLVAMGHGANQPVDSNETTEGRLRNR 238
Query: 148 RAIVFL 153
R + +
Sbjct: 239 RVQLMI 244
>gi|147001|gb|AAA24241.1| outer membrane protein II [Escherichia vulneris]
Length = 244
Score = 67.5 bits (163), Expect = 5e-10, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 55/121 (45%), Gaps = 12/121 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L + S L + D ++ G D +GS + L
Sbjct: 123 TLKSDVLFNFNKATLKPEGQQALDQMYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSE 182
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLK 154
+RA +V +Y +++GI ++++ G+ P + A A +RR + +K
Sbjct: 183 KRAQSVVDYLISKGIPSNKISARGMGESNPVTGNTCDNVKARPALIDCLAPDRRVEIEVK 242
Query: 155 G 155
G
Sbjct: 243 G 243
>gi|294673757|ref|YP_003574373.1| OmpA family protein [Prevotella ruminicola 23]
gi|294474249|gb|ADE83638.1| OmpA family protein [Prevotella ruminicola 23]
Length = 226
Score = 67.5 bits (163), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 52/134 (38%), Gaps = 2/134 (1%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ ++ + +++ E + + F T+ + + L + L+ +
Sbjct: 75 AKKEAEAVKNAQVETITDANGLEAVKVTFDSGILFATNKADLNASSKSSLQQFATVLKNN 134
Query: 80 DC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYG 137
D I GH D GS + L + RA +V NY + G+ AS++ V G P
Sbjct: 135 SACDVAIYGHTDNTGSDAINNPLSVNRAKSVSNYLKSLGVPASQIKSVDGQGSTNPVADN 194
Query: 138 HDEDAYAKNRRAIV 151
+ +NRR V
Sbjct: 195 STAEGRKQNRRVEV 208
>gi|237716994|ref|ZP_04547475.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262405762|ref|ZP_06082312.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|229442977|gb|EEO48768.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|262356637|gb|EEZ05727.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
Length = 280
Score = 67.5 bits (163), Expect = 5e-10, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 46/127 (36%), Gaps = 6/127 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
L + ++ D + F + S + + L L ++ D D IEGH D
Sbjct: 135 TDELTVREKDGKVYVAMSDKLLFQSGSARLDKRGEEALGKLAEVLNKQTDIDVFIEGHTD 194
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ L + RA +V + + +++ + G+ MP + +K
Sbjct: 195 NKPINTVQFKDNWDLSVIRATSVVRILIKNYNVNPLQIQPSGRGEYMPVDDNETIEGRSK 254
Query: 146 NRRAIVF 152
NRR +
Sbjct: 255 NRRTEII 261
>gi|312621091|ref|YP_003993819.1| outer membrane protein, ompa/motb family [Photobacterium damselae
subsp. damselae]
gi|311872812|emb|CBX86903.1| outer membrane protein, OmpA/MotB family [Photobacterium damselae
subsp. damselae]
Length = 210
Score = 67.5 bits (163), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 53/102 (51%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
V+F+ + + A I +L+ L ++ ++LIEGH D +G+ + + LG RRA +V
Sbjct: 107 RVYFNFDNSKLTRASIYILNKLIENVKASKSNYLIEGHTDSVGTTSYNKDLGYRRAKSVI 166
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+FV G++ S+++ S G+ P + NRR +
Sbjct: 167 EFFVGNGVNRSQLQGISEGELKPLETNDTSIGRSYNRRVEIK 208
>gi|294139895|ref|YP_003555873.1| sodium-driven polar flagellar protein PomB [Shewanella violacea
DSS12]
gi|293326364|dbj|BAJ01095.1| sodium-driven polar flagellar protein PomB [Shewanella violacea
DSS12]
Length = 325
Score = 67.5 bits (163), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 53/129 (41%), Gaps = 5/129 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
D + SL +Q + + F + S ++P V+ +G L + GH D
Sbjct: 183 VDGAIEIESLGQQIIIRIREKGAFSSGSGFLQPRFKPVVRRVGELLRDIPGIVTVSGHTD 242
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
++ +S+ L +RA AV + + +G +RMKV P V ++
Sbjct: 243 DMHISNELYSSNWDLSSKRAVAVAHELIKVKGFEQNRMKVVGMANSAPLVDNDSASNRSR 302
Query: 146 NRRAIVFLK 154
NRR + ++
Sbjct: 303 NRRVEIAIE 311
>gi|269105139|ref|ZP_06157833.1| lipoprotein precursor OmpA family [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268160589|gb|EEZ39088.1| lipoprotein precursor OmpA family [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 210
Score = 67.5 bits (163), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 53/102 (51%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
V+F+ + + A I +L+ L ++ ++LIEGH D +G+ + + LG RRA +V
Sbjct: 107 RVYFNFDNSKLTSASIYILNKLIENVKASKSNYLIEGHTDSVGTTSYNKDLGYRRAKSVI 166
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+FV G++ S+++ S G+ P + NRR +
Sbjct: 167 EFFVGNGVNRSQLQGISEGELKPLETNDTSIGRSYNRRVEIK 208
>gi|327252310|gb|EGE63982.1| ompA family protein [Escherichia coli STEC_7v]
Length = 127
Score = 67.5 bits (163), Expect = 5e-10, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 48/123 (39%), Gaps = 2/123 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF-LIEGHADE 91
+ +S + D++ F + Y + P Q + + + L ++GH D
Sbjct: 2 QSYGFTESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDN 61
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + + AL L+RA V + + G R + GK+ P A+NRR
Sbjct: 62 YGEDSYNEALSLKRANVVADAWAMGGQIPRRNLTTQGLGKKYPIASNKTAQGRAENRRVA 121
Query: 151 VFL 153
V +
Sbjct: 122 VVI 124
>gi|257457774|ref|ZP_05622935.1| OmpA family protein [Treponema vincentii ATCC 35580]
gi|257444824|gb|EEV19906.1| OmpA family protein [Treponema vincentii ATCC 35580]
Length = 434
Score = 67.5 bits (163), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 48/123 (39%), Gaps = 3/123 (2%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADE 91
E + S+ +++ F+ S + PA+ + L +G L + + LI GH
Sbjct: 310 PNTTVERTDEGITISL-ENIQFEPDSARLLPAEKEKLKKIGDILASYPDYELLISGHTAL 368
Query: 92 LGSRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G L +RA AV NY + + +G E P E A+NRR
Sbjct: 369 AGRAEDRQVLSEQRASAVANYLIELGVREKHHIFTRGFGAEKPIAPNTTEANKARNRRVE 428
Query: 151 VFL 153
+ +
Sbjct: 429 ITV 431
>gi|42526179|ref|NP_971277.1| OmpA family protein [Treponema denticola ATCC 35405]
gi|41816291|gb|AAS11158.1| OmpA family protein [Treponema denticola ATCC 35405]
Length = 422
Score = 67.5 bits (163), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 3/116 (2%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSS 98
E + S+ +++ F +S +R ++ + L +G L + D +FLI GH G+
Sbjct: 305 TDEGLTISI-ENIQFLPNSAILRESEKEKLKKIGEILLKFPDREFLISGHTALAGTEEER 363
Query: 99 IALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AL RA AV NY + + +G P + + AKNRR + +
Sbjct: 364 QALSEERAAAVANYLIELGVQKREHVYTRGFGARRPVAANNSPENMAKNRRVEITI 419
>gi|86141296|ref|ZP_01059842.1| OmpA family protein [Leeuwenhoekiella blandensis MED217]
gi|85831855|gb|EAQ50310.1| OmpA family protein [Leeuwenhoekiella blandensis MED217]
Length = 640
Score = 67.5 bits (163), Expect = 5e-10, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 47/122 (38%), Gaps = 8/122 (6%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADELGSRNSS 98
D ++F+ Y+I L + ++ + + IE H D+ G+ +
Sbjct: 516 TDGDIEKIRIDPIYFEYYRYNITDVAAIQLRRVIEVMDAYPEMIIKIESHTDQRGTDYFN 575
Query: 99 IALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGH------DEDAYAKNRRAIV 151
L RA + ++ + GI SR+ YG+ P E Y++NRR+
Sbjct: 576 KTLSTNRANSTKDWLIENGIDPSRIQSAIGYGESQPINICDEEGKTCTELEYSENRRSEF 635
Query: 152 FL 153
+
Sbjct: 636 IV 637
>gi|315180802|gb|ADT87716.1| sodium-type flagellar protein MotY [Vibrio furnissii NCTC 11218]
Length = 294
Score = 67.5 bits (163), Expect = 5e-10, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 2/99 (2%)
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
S + A + L+ + ++ + L+ + D RN S +L +RA ++ YF
Sbjct: 191 DSVELNKASQKRLAQIAEYIRYNPDIDLVLVSTYTDSTDGRNESQSLSDKRAESLQKYFE 250
Query: 115 ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ G+ + R++V YGK P KNRR ++ L
Sbjct: 251 SLGLPSDRIQVQGYGKRRPIADNASPIGKDKNRRVVISL 289
>gi|186472020|ref|YP_001859362.1| OmpA/MotB domain-containing protein [Burkholderia phymatum STM815]
gi|184194352|gb|ACC72316.1| OmpA/MotB domain protein [Burkholderia phymatum STM815]
Length = 371
Score = 67.5 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 34/145 (23%), Positives = 50/145 (34%), Gaps = 8/145 (5%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
D LD P S + S+ FD S ++ + + L S L++
Sbjct: 175 DELDHCAPPPPPPPAADSPLPEKPISLSADALFDFDSAKLKAEGFEAVDVLASNLKRVKA 234
Query: 82 D--FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ G+ D GS + L RRA AV + RG+ V G P V
Sbjct: 235 IDVVTVIGYTDRFGSVAHNRDLSRRRAQAVADALKQRGVDPGHFDVRGAGSTAPVVTCPG 294
Query: 140 E------DAYAKNRRAIVFLKGCRA 158
+ A NRR + + G A
Sbjct: 295 PKKPAVIECLAPNRRVEIRVSGQTA 319
>gi|163800343|ref|ZP_02194244.1| putative protein F-related protein [Vibrio sp. AND4]
gi|159175786|gb|EDP60580.1| putative protein F-related protein [Vibrio sp. AND4]
Length = 209
Score = 67.5 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 50/118 (42%), Gaps = 1/118 (0%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
E+ E + + V F T S + + +LG + ++ D D ++ GHAD G+
Sbjct: 88 ETINGEHLMVRLKEQVHFQTGSSRLSAQSQGWIQSLGHYLAKRTDIDVVVNGHADSAGAA 147
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ + +L +RA V + + R+ +G+ +P A NRR + L
Sbjct: 148 SFNDSLSEKRAREVEKQLLETSLPRQRVFSRGFGEYVPQCSNATASGKACNRRVELML 205
>gi|312132093|ref|YP_003999433.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132]
gi|311908639|gb|ADQ19080.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132]
Length = 165
Score = 67.5 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 33/159 (20%), Positives = 52/159 (32%), Gaps = 12/159 (7%)
Query: 7 FIILSAITMMSI----------SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDT 56
F+ + ++ ID E + E+ D F
Sbjct: 4 FLAILISAILYCILWNTYRKPLCDIDRDVVLEVPAVAPAPEPTEVEKLLFEPLDIYFQSA 63
Query: 57 SSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
S IR ++ +L E ++ GH D G+ S++ L L R V
Sbjct: 64 SLEIIRTPQLEEWLSLAKNYLEENPGERLVLTGHTDNEGTEESNLNLSLERGNRVKEILS 123
Query: 115 ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
A G SA ++V G+ P + KNRR + L
Sbjct: 124 AEGFSAESLEVEGKGQSEPIAGNDTPEGMQKNRRVSIRL 162
>gi|332668363|ref|YP_004451151.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332337177|gb|AEE54278.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 312
Score = 67.5 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 48/114 (42%), Gaps = 6/114 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSS----IA 100
++ D + F + S ++ +VL + L+ + D + ++EG+ D + +
Sbjct: 181 VNLSDKMLFQSGSATMTTKANEVLGKIAQILKSRPDLEVMVEGYTDNKPIKTACIEDNWD 240
Query: 101 LGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L ++RA AV G+ +R+ G+ E+ + NRR + +
Sbjct: 241 LSVKRATAVARTLQKTHGVDPNRLIAAGRGEYNALATNDTEEGRSTNRRTRIII 294
>gi|284051859|ref|ZP_06382069.1| OmpA/MotB [Arthrospira platensis str. Paraca]
Length = 285
Score = 67.5 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 49/137 (35%), Gaps = 2/137 (1%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+ I P S ++ + F+ S ++RP +L NL L+
Sbjct: 146 APSSPEAENIPPPTPRTARSRSGNGLIMTLPSDILFNPGSSTLRPGANVILDNLIPDLQN 205
Query: 79 HD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVY 136
+ + GH D+ GSR ++ L +A A+ Y A YG P++
Sbjct: 206 YRGAVVRVAGHTDDSGSRQQNLVLSSAQAEAIVQYLSNAVDYQAYHWVAIGYGMTRPALE 265
Query: 137 GHDEDAYAKNRRAIVFL 153
+ NRR V +
Sbjct: 266 NTSDINRQLNRRIEVAI 282
>gi|325473514|gb|EGC76707.1| OmpA family protein [Treponema denticola F0402]
Length = 422
Score = 67.5 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 55/140 (39%), Gaps = 4/140 (2%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
+ + + + E E + S+ +++ F +S +R ++ + L +G
Sbjct: 282 TAAEEEIKKSVEDLNLENTTIEK-TDEGLTISI-ENIQFLPNSAILRESEKEKLKKIGEI 339
Query: 76 L-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMP 133
L + D +FLI GH G+ L RA AV NY + + +G P
Sbjct: 340 LLKFPDREFLISGHTALAGTEEERQKLSEERAAAVANYLIDLGVQKREHVYTRGFGARRP 399
Query: 134 SVYGHDEDAYAKNRRAIVFL 153
+ + AKNRR + +
Sbjct: 400 VAANNSPENMAKNRRVEITI 419
>gi|320535353|ref|ZP_08035469.1| OmpA family protein [Treponema phagedenis F0421]
gi|320147797|gb|EFW39297.1| OmpA family protein [Treponema phagedenis F0421]
Length = 437
Score = 67.5 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 41/106 (38%), Gaps = 2/106 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKH--DCDFLIEGHADELGSRNSSIALGLRRAYA 108
+ F S I P + + + L FLIEGH ++ + + L + RA
Sbjct: 330 DIRFIADSPEILPEEKGRVDIIARALRAMGPYTKFLIEGHTADINQPKNQLVLSVARADK 389
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ RGI ASRM YG P AKNRR + +
Sbjct: 390 IAEELAKRGIDASRMTTAGYGGTRPIAPNDTSPNRAKNRRVEITIM 435
>gi|282858415|ref|ZP_06267595.1| OmpA family protein [Prevotella bivia JCVIHMP010]
gi|282588863|gb|EFB93988.1| OmpA family protein [Prevotella bivia JCVIHMP010]
Length = 287
Score = 67.5 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 50/119 (42%), Gaps = 11/119 (9%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADE---------LGSR 95
S+ D++ + + SY I Q LS + + ++ D LIEG+ D + +
Sbjct: 147 ISLADNMLYKSGSYEINDRAEQTLSKIAKIISDYNDYDVLIEGNTDNVPINTANKMMTNI 206
Query: 96 NSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L RA +V Y ++ R+ G+ P V + E +NRR + +
Sbjct: 207 RNNWDLSALRATSVAKYLQEHFGVNPKRITAGGRGEYNPLVANNTELGRQRNRRTQIII 265
>gi|260773001|ref|ZP_05881917.1| outer membrane protein [Vibrio metschnikovii CIP 69.14]
gi|260612140|gb|EEX37343.1| outer membrane protein [Vibrio metschnikovii CIP 69.14]
Length = 222
Score = 67.5 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 52/123 (42%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
V + Q + + + F T+SY + + + L + ++ D +I+GH D
Sbjct: 96 SGVQVQRVGDNQLLLRMENGIGFQTNSYQLDSSIHRTLRGVAKILVQYPDTSLVIDGHTD 155
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G ++ L RRA +V ++ +++G++ R G P + A NRR
Sbjct: 156 STGGDTTNQVLSERRAESVRSFLLSQGVAPGRAIARGNGSRFPICTNSTVEGRACNRRVD 215
Query: 151 VFL 153
+ +
Sbjct: 216 IQI 218
>gi|163789308|ref|ZP_02183749.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Flavobacteriales bacterium ALC-1]
gi|159875376|gb|EDP69439.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Flavobacteriales bacterium ALC-1]
Length = 680
Score = 67.5 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 42/120 (35%), Gaps = 10/120 (8%)
Query: 51 SVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
++FD +IR + + + I H D G + + L RRA +
Sbjct: 555 IIYFDFDKSNIRYDAEIEIQKVLAVLNKYPTMHIDIRSHTDCRGPASYNEKLSDRRAKST 614
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDE---------DAYAKNRRAIVFLKGCRANT 160
Y + +GI+A R+ YG+ E + + NRR+ + T
Sbjct: 615 RQYLIDKGIAAERLTAKGYGESRLVNDCGCEPTNESSCSQEEHQLNRRSEFIITSINGKT 674
>gi|157376457|ref|YP_001475057.1| flagellar motor protein MotB [Shewanella sediminis HAW-EB3]
gi|157318831|gb|ABV37929.1| OmpA/MotB domain protein [Shewanella sediminis HAW-EB3]
Length = 325
Score = 67.5 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 5/129 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
D + SL +Q + + F + S ++P V+ +G L+ + GH D
Sbjct: 183 VDGAIEIESLGQQIIIRIREKGAFSSGSGFLQPRFKPVIRRVGELLKDVPGIVTVSGHTD 242
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
++ +S+ L +RA AV + + +G RMKV P V A+
Sbjct: 243 DMRISNELYSSNWDLSSKRAVAVAHELIRVKGFDQRRMKVVGMANSDPLVANDSPGNRAR 302
Query: 146 NRRAIVFLK 154
NRR + ++
Sbjct: 303 NRRVEIAIE 311
>gi|330446492|ref|ZP_08310144.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328490683|dbj|GAA04641.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 279
Score = 67.5 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 44/113 (38%), Gaps = 2/113 (1%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK--HDCDFLIEGHADELGSRNSSIA 100
F + +D +S ++ Q L+ + ++ L+ D L S
Sbjct: 161 GFEDIAFSVLHYDENSDTLNKISQQRLAKIADFVRYSDDVDLVLVASFNDSLAGTTESQD 220
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ RA + YF + G+ R+++ +YGK P + NRR ++ L
Sbjct: 221 MSEHRAENLRKYFKSLGLPEDRVQIEAYGKRRPIADNSTPIGRSLNRRVVISL 273
>gi|171318847|ref|ZP_02907983.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
gi|171095946|gb|EDT40882.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
Length = 226
Score = 67.5 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 5/116 (4%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGS----RNS 97
+ + F+ + P VLS + L +H D L+EGH D + S
Sbjct: 109 GIEIGIDAKILFNVGDARLLPDATPVLSQIARALSEHATGDILVEGHTDSVPIANAKYES 168
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA +V Y RG++ R+ P V G D A A+NRR +F+
Sbjct: 169 NWELSSARAGSVVRYLADRGVAPHRLAAIGRADTQPLVAGDDAPARARNRRVTIFV 224
>gi|157374990|ref|YP_001473590.1| OmpA/MotB domain-containing protein [Shewanella sediminis HAW-EB3]
gi|157317364|gb|ABV36462.1| OmpA/MotB domain protein [Shewanella sediminis HAW-EB3]
Length = 297
Score = 67.5 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Query: 54 FDTSSYSIRPADIQVLSNLGSW--LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
++ + ++ + + + LI+ + D G R+ + + RA +V N
Sbjct: 192 YEFGGAELTRYAKAQIAKIQEYLAYDPEVELVLIDAYTDSYGGRSINQKVSEERADSVKN 251
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+F++ GI+ R+ +G+ D ++NRR ++ +
Sbjct: 252 FFLSAGITQERIHTVGHGERHHVASNDTIDERSRNRRVVIRIS 294
>gi|88706015|ref|ZP_01103723.1| chemotaxis MotB protein [Congregibacter litoralis KT71]
gi|88699729|gb|EAQ96840.1| chemotaxis MotB protein [Congregibacter litoralis KT71]
Length = 216
Score = 67.5 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 47/130 (36%), Gaps = 10/130 (7%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD----FLIE 86
+ + + SV F +S ++ ++L+ L L + +I
Sbjct: 70 AGPLASGRITINDGRIGISGSVLFALNSDRLQDEGRELLATLADPLNVFLKENDQLLMIS 129
Query: 87 GHADE------LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
G D+ S + L +RA V VA G+ A R+ ++G + P DE
Sbjct: 130 GFTDDLPIQAGNLSFKDNWELSAQRALTVTRELVAAGLPADRVFAAAFGDQQPVAPNRDE 189
Query: 141 DAYAKNRRAI 150
A NRR
Sbjct: 190 SGRALNRRVE 199
>gi|299140724|ref|ZP_07033862.1| lipoprotein PG3 [Prevotella oris C735]
gi|298577690|gb|EFI49558.1| lipoprotein PG3 [Prevotella oris C735]
Length = 225
Score = 67.5 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 2/126 (1%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELG 93
+ +++ + + + F T+ ++ + L+ L+ + DC I GH D G
Sbjct: 88 VTDANGLKAVKVTFDSGILFATNQATLTSSSKNDLAKFSKVLKDNSDCHVDIYGHTDTTG 147
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ +I L RRA +V NY G+S S+ + V G P +NRR V+
Sbjct: 148 NDGINIPLSNRRAESVVNYLKQCGVSGSQFQNVVGKGSAEPVADNSTAAGRKQNRRVEVY 207
Query: 153 LKGCRA 158
L +A
Sbjct: 208 LYASQA 213
>gi|332296685|ref|YP_004438607.1| OmpA/MotB domain protein [Treponema brennaborense DSM 12168]
gi|332179788|gb|AEE15476.1| OmpA/MotB domain protein [Treponema brennaborense DSM 12168]
Length = 475
Score = 67.5 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 39/117 (33%), Gaps = 2/117 (1%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADELGSRN 96
Q+ SV D F S I + L + L +EGH +G
Sbjct: 358 EDTQQGLRLSVRDIRFRP-DSAEILSEESWRLDAIADMLRSEPDAVYLVEGHTASVGKPE 416
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L + RA AV V+RG + T YG A+NRR + +
Sbjct: 417 GEKKLSVERAQAVVAALVSRGFRKEQFLFTGYGGTRSVADNGTAAGRAENRRVEITI 473
>gi|119947169|ref|YP_944849.1| OmpA/MotB domain-containing protein [Psychromonas ingrahamii 37]
gi|119865773|gb|ABM05250.1| OmpA/MotB domain protein [Psychromonas ingrahamii 37]
Length = 295
Score = 67.5 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 44/106 (41%), Gaps = 2/106 (1%)
Query: 57 SSYSIRPADIQVLSNLGSWLEKHD--CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
+ Y + + L L ++ K LI+GH+D+ G+ + ++ L RA + +
Sbjct: 186 NQYKLNKTQTKDLVKLSDYINKDQSVVKILIDGHSDKYGNSSQNLRLSKFRADEIAQTLI 245
Query: 115 ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
++ +++ +G P + KNRR + L A T
Sbjct: 246 NNSVNMDLIEIRGHGGRYPIASNDSAEGREKNRRVSIRLVKANAKT 291
>gi|170700356|ref|ZP_02891367.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
gi|170134743|gb|EDT03060.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
Length = 228
Score = 67.5 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 5/116 (4%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGS----RNS 97
+ + F + P VLS + L +H D L+EGH D + S
Sbjct: 111 GIEIGIDAKILFSVGDARLLPDATPVLSQIARALSEHATGDILVEGHTDSVPIANAKYES 170
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA +V Y RG++ R+ P V G D A A+NRR +F+
Sbjct: 171 NWELSSARAGSVVRYLADRGVAPHRLAAIGRADTQPLVAGDDAPARARNRRVTIFV 226
>gi|89111206|dbj|BAE80295.1| outer membrane protein OmpA [Acidovorax avenae subsp. avenae]
Length = 379
Score = 67.5 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 48/132 (36%), Gaps = 1/132 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
+ ++++ +E Q + V V F T I P + + +
Sbjct: 245 ETKPLQVTAGLLPASELKAQIDKTGKVALHVNFATDKTDILPDSQPQIEQVVQLLRQDTS 304
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ G+ D G + L RA AV A+GI ASR+ +G P +
Sbjct: 305 LKLAVNGYTDNTGDAAHNKTLSEGRAKAVAAAVAAQGIDASRLSSAGFGAADPVADNATD 364
Query: 141 DAYAKNRRAIVF 152
+ AKNRR +
Sbjct: 365 EGKAKNRRVELV 376
>gi|116623181|ref|YP_825337.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116226343|gb|ABJ85052.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076]
Length = 911
Score = 67.5 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 45/104 (43%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
+ + F+ +S + +L + D + GH D +GS + L LRRA AV
Sbjct: 33 EEINFEFNSSILSDGYPSLLRLADLLSQHRDYKVKVTGHTDYVGSAAYNDKLALRRADAV 92
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ V G+ +++ + GK P V ++ NRR + +
Sbjct: 93 KAFLVKYGVGDAQVTTSGDGKRSPIVDNKTKEGRFMNRRVDLAV 136
>gi|332993983|gb|AEF04038.1| sodium-type flagellar protein MotY [Alteromonas sp. SN2]
Length = 292
Score = 67.5 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHD--CDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
+ +S + + L+ +G +L++ L++G+ D G R ++ L +RRA V +
Sbjct: 188 YQKNSTELTKYSQKRLTMIGEYLKEDSDLELVLLDGYTDSYGGRWNNEQLSIRRANEVKS 247
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
Y G+ R+++T +G++ ++ A+NRR +V L
Sbjct: 248 YLTTIGVPDDRIQLTGHGEKRHIANNDTRESRAQNRRVVVRLS 290
>gi|83647595|ref|YP_436030.1| outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hahella chejuensis KCTC 2396]
gi|83635638|gb|ABC31605.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hahella chejuensis KCTC 2396]
Length = 187
Score = 67.5 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 37/187 (19%), Positives = 69/187 (36%), Gaps = 33/187 (17%)
Query: 1 MQYSTI----FIILSAITMMSISGIDNLDTKISSPDTVLNESS----------------- 39
M +I ++L + + D + +
Sbjct: 1 MNVLSIRNIFALVLVSFIAAGCTSTDTRPDETVGVVDQDGADAGGVGLGNGSGLSEEELA 60
Query: 40 -----------LQEQFSSSVGDSVFFDTSSYSIRPADI-QVLSNLGSWLEKHDCDFLIEG 87
EQ + +FD ++P + ++ ++ G
Sbjct: 61 EQQRLAEQNAMTAEQDALREVRVFYFDFDKTIVKPESHMSLRAHAALLAANPAVKVVLNG 120
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+ADE G++ ++ALG RRA A+ + V G + S+++ SYG+E P H+E A+ KNR
Sbjct: 121 YADERGTKEYNLALGERRAQAIERFLVVNGANDSQIETVSYGEEFPVDPAHNEAAWNKNR 180
Query: 148 RAIVFLK 154
R ++ K
Sbjct: 181 RVVIEYK 187
>gi|172064119|ref|YP_001811770.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6]
gi|171996636|gb|ACB67554.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6]
Length = 224
Score = 67.5 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 57/143 (39%), Gaps = 3/143 (2%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL 72
T++ G + ++ T + E ++ F T ++ PA L L
Sbjct: 83 ATLVFQCGAAPAEAASAAEPTPTPAPAAVEH--VNLAGDALFATGLATLTPAARASLDKL 140
Query: 73 -GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
++ + GH D +G+ +++AL RRA V Y A G++A + V+ G
Sbjct: 141 LSERADRTYTQVTVTGHTDSVGNDAANLALSKRRAETVAGYLKAHGLNAQTVSVSGRGSA 200
Query: 132 MPSVYGHDEDAYAKNRRAIVFLK 154
P + A NRR + L+
Sbjct: 201 DPVASNATAEGRASNRRVDISLQ 223
>gi|167567883|ref|ZP_02360799.1| hypothetical protein BoklE_35363 [Burkholderia oklahomensis EO147]
Length = 421
Score = 67.5 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 20/127 (15%), Positives = 42/127 (33%), Gaps = 4/127 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
++ S + F + ++ +++ + + K + G+ D
Sbjct: 293 AAGTVSVDEDSRHGSVTFRSDAMFSPGAAAVNSTMGPLIAKIAGEIVKVPGKVTVTGYTD 352
Query: 91 ELGSRNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ ++ A L RA V + G+ ASR++ G P A N
Sbjct: 353 NVPIKSRQFASNEALSEERATQVMQMLQSAGVPASRLESVGKGDADPIGDNGTVQGRALN 412
Query: 147 RRAIVFL 153
RR + +
Sbjct: 413 RRVDITV 419
>gi|146993|gb|AAA24237.1| outer membrane protein II [Escherichia vulneris]
Length = 244
Score = 67.5 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 55/121 (45%), Gaps = 12/121 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L + S L + D ++ G D +GS + L
Sbjct: 123 TLKSDVLFNFNKATLKPEGQQALDQMYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSE 182
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLK 154
+RA +V +Y +++GI ++++ G+ P + A A +RR + +K
Sbjct: 183 KRAQSVVDYLISKGIPSNKISARGMGESNPVTGNTCDNVKARPALIDCLAPDRRVEIEVK 242
Query: 155 G 155
G
Sbjct: 243 G 243
>gi|167574381|ref|ZP_02367255.1| hypothetical protein BoklC_31379 [Burkholderia oklahomensis C6786]
Length = 421
Score = 67.5 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 20/127 (15%), Positives = 41/127 (32%), Gaps = 4/127 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
++ S + F + ++ +++ + + K + G+ D
Sbjct: 293 AAGTVSVDEDSRHGSVTFRSDAMFSPGAAAVNSTMGPLIAKIAGEIVKVPGKVTVTGYTD 352
Query: 91 ELGSRNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ + A L RA V + G+ ASR++ G P A N
Sbjct: 353 NVPINSRQFASNEALSEERATQVMQMLQSAGVPASRLESVGKGDADPIGDNGTVQGRALN 412
Query: 147 RRAIVFL 153
RR + +
Sbjct: 413 RRVDITV 419
>gi|167624709|ref|YP_001675003.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis
HAW-EB4]
gi|167354731|gb|ABZ77344.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4]
Length = 321
Score = 67.5 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 51/121 (42%), Gaps = 1/121 (0%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ +++ S+ F S + A + L + + D + I + D L
Sbjct: 201 DATSTTAITVSKPVSISAKSLFGFDSSKL-VATEALAEVLKNVIASKDTEICITAYTDSL 259
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
G++ ++ L +RA A +YF++ G+ SR+ V G+ P + A NRR +
Sbjct: 260 GAKEYNLTLSKQRAEATRSYFISNGVEPSRIHVDWKGEASPVATNRTAEGRALNRRVKIE 319
Query: 153 L 153
L
Sbjct: 320 L 320
>gi|114321676|ref|YP_743359.1| OmpA/MotB domain-containing protein [Alkalilimnicola ehrlichii
MLHE-1]
gi|114228070|gb|ABI57869.1| OmpA/MotB domain protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 216
Score = 67.5 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 48/121 (39%), Gaps = 9/121 (7%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNSSIALGL 103
SV F S + P L N+ + + + GH D +GS + L
Sbjct: 96 ISVDSEALFGFDSDELTPGGRANLRNVIERINAMERVDSIRVNGHTDHIGSAAYNQELSE 155
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE-------DAYAKNRRAIVFLKGC 156
RRA AV + V +G+ + + YG++ P D + A NRR + ++G
Sbjct: 156 RRAAAVRTFMVQQGVDDNLITSRGYGEDRPVKECPDNLSGSALIECLAPNRRVEIHVEGV 215
Query: 157 R 157
R
Sbjct: 216 R 216
>gi|325473749|gb|EGC76938.1| OmpA family protein [Treponema denticola F0402]
Length = 440
Score = 67.5 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 48/132 (36%), Gaps = 2/132 (1%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD 82
+ P+ + + + + + F+ + + L + L+K + +
Sbjct: 308 QKEKTEIKPNKDFEVAKTKRGTMLRLKN-LQFEPDKAVLLKGEEAKLDEIAKILKKSESE 366
Query: 83 FL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
F +EGH ++G L RA V V RGI A + G P E+
Sbjct: 367 FFFVEGHTADVGKPEEEKILSQERAKTVIEKLVKRGIPAEKFIYQGAGGTKPIAPNGTEE 426
Query: 142 AYAKNRRAIVFL 153
A+NRR + +
Sbjct: 427 GRAQNRRVEITI 438
>gi|323700324|ref|ZP_08112236.1| OmpA/MotB domain protein [Desulfovibrio sp. ND132]
gi|323460256|gb|EGB16121.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans ND132]
Length = 174
Score = 67.5 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 41/105 (39%), Gaps = 5/105 (4%)
Query: 52 VFFDTSSYSIRPADI----QVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++F T+S I L + I GH D +GS ++ L +RA
Sbjct: 68 IYFATNSAVITGEQSFRQLDELGRALTSSALRGARMEIGGHTDSVGSDAYNLQLSRKRAQ 127
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
AV +Y + + VT YG+ P + A NRR ++
Sbjct: 128 AVSDYLNKKYGFTAA-AVTGYGESAPVASNETAEGRAGNRRVVIT 171
>gi|148979316|ref|ZP_01815448.1| hypothetical protein VSWAT3_05151 [Vibrionales bacterium SWAT-3]
gi|145961856|gb|EDK27148.1| hypothetical protein VSWAT3_05151 [Vibrionales bacterium SWAT-3]
Length = 322
Score = 67.5 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 52/149 (34%), Gaps = 2/149 (1%)
Query: 8 IILSAITM-MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADI 66
++L+ +S + L L + + + F Y +R D
Sbjct: 15 LLLAGCATDTYVSQENRDKFAGLDVSKFLISECLAPEREVHIAIAEHFAFDKYKLRDLDK 74
Query: 67 QVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR-GISASRMKV 125
L + I GH D GS + L RRA +V +Y A + +V
Sbjct: 75 INLDTFVEEIRGLKGRITIVGHTDYKGSLEYNQRLSQRRAKSVADYLKAYLDPTNYDWEV 134
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G+ P + G + A+NRRA + +
Sbjct: 135 KHLGETQPLLLGKTDKDRAENRRAFIVFE 163
Score = 56.7 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FD ++P D+ L + S L + ++ GH D+ GS + + L RRA V Y
Sbjct: 190 HFDFDKSVLKPEDLTQLDDFASQLSGLQGNIMVAGHTDQAGSVSYNEKLAERRAETVVKY 249
Query: 113 FVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ + +V S+GK P++ E A A NRRA + K
Sbjct: 250 LKTKLNPKQFIWEVKSFGKLQPAINERSEKADALNRRAFIVFK 292
>gi|149286|gb|AAA25119.1| outer membrane protein II [Klebsiella pneumoniae]
Length = 243
Score = 67.5 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 12/121 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L L + ++ D ++ G+ D +GS + L
Sbjct: 122 TLKSDVLFNFNKATLKPEGQQALDQLYTQLSNMDPKDGSAVVLGYTDRIGSEAYNQQLSE 181
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
+RA +V +Y VA+GI A ++ G+ P + A A +RR + +K
Sbjct: 182 KRAQSVVDYLVAKGIPAGKISARGMGESNPVTGNTCDNVKARAALIDCLAPDRRVEIEVK 241
Query: 155 G 155
G
Sbjct: 242 G 242
>gi|332716479|ref|YP_004443945.1| Flagellar motor protein [Agrobacterium sp. H13-3]
gi|325063164|gb|ADY66854.1| Flagellar motor protein [Agrobacterium sp. H13-3]
Length = 343
Score = 67.5 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 40/102 (39%), Gaps = 5/102 (4%)
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG-----SRNSSIALGLRRAYAVFN 111
+ ++ + + ++GH D + + L RA +V
Sbjct: 239 GQAEMEKLAAALIDLAKEIPTEINWVLRVDGHTDNVQLSGSGRFRDNWELSSARATSVVK 298
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +++G+ A+R+ +G+ P G +A +NRR + L
Sbjct: 299 FLISKGVPANRLVAAGFGEYQPIAEGDTPEARQQNRRIELKL 340
>gi|163858178|ref|YP_001632476.1| hypothetical protein Bpet3863 [Bordetella petrii DSM 12804]
gi|163261906|emb|CAP44208.1| OmpA-family protein [Bordetella petrii]
Length = 215
Score = 67.5 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 10/132 (7%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS----NLGSWLEKHDCDFLIE 86
+ + SV F +S ++P +VL L ++L+ D ++
Sbjct: 70 AGPLAAGRVTLVDGRIGISGSVLFALNSDELQPEGEEVLKSLVGPLSAYLQARDEVLMVS 129
Query: 87 GHADELGSRNSS------IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
G D ++ L +RA V + +GI+ + + ++G E P
Sbjct: 130 GFTDNQPVHGNNRRFADNWDLSAQRALTVTRALIEQGIAPASVFAAAFGAEQPVASNDSA 189
Query: 141 DAYAKNRRAIVF 152
+ A NRR +
Sbjct: 190 EGRASNRRVEIV 201
>gi|326799502|ref|YP_004317321.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
gi|326550266|gb|ADZ78651.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
Length = 647
Score = 67.5 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 57/145 (39%), Gaps = 9/145 (6%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSS---VGDSVFFDTSSYSIRPADIQVLSNLGS 74
I+ +T +P + + +Q D++++D ++IR +L L
Sbjct: 500 IADSAFTNTNGLNPGDTVKVALYLDQLKQGKTFRLDNIYYDFDKFNIRKDAAVILDGLVK 559
Query: 75 WLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
++ + + H D G ++ L +RA A +Y V+RGI+ RM YG+
Sbjct: 560 IMKDNPTLKIELSSHTDSRGRDKYNMTLSQKRAQAAVDYLVSRGIARDRMIAKGYGESKL 619
Query: 134 SVYGHD-----EDAYAKNRRAIVFL 153
+ E + NRR +
Sbjct: 620 LNRCANGIKCSEAEHQLNRRTEFTV 644
>gi|156974515|ref|YP_001445422.1| hypothetical protein VIBHAR_02232 [Vibrio harveyi ATCC BAA-1116]
gi|156526109|gb|ABU71195.1| hypothetical protein VIBHAR_02232 [Vibrio harveyi ATCC BAA-1116]
Length = 284
Score = 67.5 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 52/141 (36%), Gaps = 1/141 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
+ + ++ ++ + F S I P + L+ L H
Sbjct: 134 SQTTCKPPQDIEALRSDLNIVANIYDLLNVDNQFAIDSAEINPKYMGHLAEAAYILRDHP 193
Query: 81 -CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
++ GHAD G+ + L RA V Y GI++ R++ S G+ +P G
Sbjct: 194 SLSLVVTGHADATGTPEYNQKLAQDRAEQVKRYLNVFGITSDRVQTKSVGETLPLYDGQT 253
Query: 140 EDAYAKNRRAIVFLKGCRANT 160
NRR + + R++T
Sbjct: 254 PAVRLTNRRVSIEVLNARSDT 274
>gi|117920980|ref|YP_870172.1| OmpA/MotB domain-containing protein [Shewanella sp. ANA-3]
gi|117613312|gb|ABK48766.1| OmpA/MotB domain protein [Shewanella sp. ANA-3]
Length = 290
Score = 67.5 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 36/72 (50%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
L++ + D G R+ + + +RA +V ++FVA GI R+ +G+ D +
Sbjct: 215 VLVDAYTDSYGGRSVNQKVSDKRAESVKDFFVASGIPQDRIVTVGHGERRHVASNDDIEE 274
Query: 143 YAKNRRAIVFLK 154
A NRR ++ +
Sbjct: 275 RALNRRVVIRIS 286
>gi|192360398|ref|YP_001983048.1| putative sodium-type flagellar protein MotY [Cellvibrio japonicus
Ueda107]
gi|190686563|gb|ACE84241.1| putative sodium-type flagellar protein MotY [Cellvibrio japonicus
Ueda107]
Length = 392
Score = 67.5 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 52/119 (43%), Gaps = 4/119 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHADELGSRNSSIAL 101
F+ ++ + + + L + + +K+ +++ H+D+ S+
Sbjct: 192 FAQIARITLHYQRDASQLSNKAKGELDKVARYSLADKNVLGVIVDAHSDKRDEAEQSMDA 251
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
+A V Y +A+G++ +++ +G + P+ E A+NRR V L+ A+T
Sbjct: 252 SRTQAELVSQYLIAKGMNVAQITSRWHGDKYPAASNATEQGRAQNRRVTVRLEN--ADT 308
>gi|326794907|ref|YP_004312727.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
gi|326545671|gb|ADZ90891.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
Length = 209
Score = 67.1 bits (162), Expect = 6e-10, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 54/133 (40%), Gaps = 4/133 (3%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDC 81
S D V + + S + + FD+ ++P + L ++ +
Sbjct: 53 ANTPAGSRVDNVGCSAESSKLLSVELN--ILFDSGKDIVKPRYYSEVKKLADFMRKNPQS 110
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDE 140
+IEGH D++GS ++ L RRA A+ + + + SR+K YG+ P
Sbjct: 111 SIVIEGHTDDVGSEELNLGLSQRRASAIASVLTDSFMVRKSRVKGVGYGETRPIATNDTA 170
Query: 141 DAYAKNRRAIVFL 153
+NRR + +
Sbjct: 171 TGREQNRRVVAEI 183
>gi|111223898|ref|YP_714692.1| hypothetical protein FRAAL4505 [Frankia alni ACN14a]
gi|111151430|emb|CAJ63147.1| hypothetical protein; putative signal peptide; putative OmpA/MotB
domain [Frankia alni ACN14a]
Length = 384
Score = 67.1 bits (162), Expect = 6e-10, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 43/102 (42%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+V F S + P+ L ++ + L D L+ G+ D G + AL L RA A
Sbjct: 278 AVTFPVSGARLSPSAQARLDSVAAVLRGGDLAVLVGGYTDTSGPSALNQALSLNRAQAAA 337
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+Y +RG+ A ++ +G P A NRR +
Sbjct: 338 DYLTSRGVPADLVRAAGFGSREPVAGNGTPQGRAANRRIEII 379
>gi|94987133|ref|YP_595066.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Lawsonia intracellularis PHE/MN1-00]
gi|94731382|emb|CAJ54745.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Lawsonia intracellularis PHE/MN1-00]
Length = 162
Score = 67.1 bits (162), Expect = 6e-10, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 1/139 (0%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
+ + + + ++ + ++FD Y I+P +L
Sbjct: 21 FGCCKKSVDVEQSLATECIAPAPAINAAAETITDGIIYFDFDKYDIKPEYRDMLQKKAEL 80
Query: 76 LEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
L+++ IEG+ D G++ ++ALG RRA A + Y V G++ S++++ S+GKE P+
Sbjct: 81 LKEYPCIRVRIEGNCDARGTQEYNLALGERRARAAYEYLVMLGVNPSQLEIISFGKERPA 140
Query: 135 VYGHDEDAYAKNRRAIVFL 153
V G +AKNRR +
Sbjct: 141 VEGTGPAVWAKNRRDDFRI 159
>gi|129138|sp|P24754|OMPA_ESCHE RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II
gi|146987|gb|AAA24234.1| outer membrane protein II [Escherichia hermannii]
gi|146995|gb|AAA24238.1| outer membrane protein II [Escherichia hermannii]
Length = 243
Score = 67.1 bits (162), Expect = 6e-10, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 54/121 (44%), Gaps = 12/121 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L + + L + D ++ G D +GS + L
Sbjct: 122 TLKSDVLFNFNKATLKPEGQQALDQMYTQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSE 181
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE---------DAYAKNRRAIVFLK 154
+RA +V +Y +++GI + ++ G+ P + D A +RR + +K
Sbjct: 182 KRAQSVVDYLISKGIPSDKISARGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEVK 241
Query: 155 G 155
G
Sbjct: 242 G 242
>gi|187925345|ref|YP_001896987.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
gi|187716539|gb|ACD17763.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
Length = 266
Score = 67.1 bits (162), Expect = 6e-10, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 41/120 (34%), Gaps = 1/120 (0%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELG 93
+ Q + + F T S ++ + L + + + + G+ D+ G
Sbjct: 144 SQVKPVVPQVRLLLQGNANFATDSAALSSVAKENLDRFMNVNQGVNLHRVTVTGYTDKTG 203
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L RA AV Y G+ A + G P + +NRR V +
Sbjct: 204 LEAHNLKLSQARAAAVMQYLRDGGLHADQFVARGLGSADPVAPNATAEGRTQNRRVDVRV 263
>gi|171914446|ref|ZP_02929916.1| OmpA/MotB [Verrucomicrobium spinosum DSM 4136]
Length = 323
Score = 67.1 bits (162), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 2/105 (1%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
VFFDT+ ++P L + E L+ GH D +G + +L RRA A
Sbjct: 217 HGVFFDTNRTEVKPESKPALDEVAKLMTEDPALKVLVVGHTDTVGGFEPNRSLSERRAAA 276
Query: 109 VFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
V A+ ISA R+ P+ E+ A+NRR +
Sbjct: 277 VVAELKAKYGISAERLFSFGVSYAAPAATNSTEEGRAQNRRVELV 321
>gi|281425749|ref|ZP_06256662.1| lipoprotein PG3 [Prevotella oris F0302]
gi|281400157|gb|EFB30988.1| lipoprotein PG3 [Prevotella oris F0302]
Length = 225
Score = 67.1 bits (162), Expect = 7e-10, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 2/126 (1%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELG 93
+ +++ + + + F T+ ++ + L+ L+ + DC I GH D G
Sbjct: 88 VTDANGLKAVKVTFDSGILFATNQATLTSSSKNDLAKFSKVLKDNSDCHVDIYGHTDTTG 147
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ +I L RRA +V NY G+S S+ K V G P +NRR V+
Sbjct: 148 NDGINIPLSNRRAESVVNYLKQCGVSGSQFKNVVGKGSAEPVADNSTAAGRKQNRRVEVY 207
Query: 153 LKGCRA 158
L +A
Sbjct: 208 LYASQA 213
>gi|221210919|ref|ZP_03583899.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1]
gi|221169875|gb|EEE02342.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1]
Length = 218
Score = 67.1 bits (162), Expect = 7e-10, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 47/116 (40%), Gaps = 5/116 (4%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGS----RNS 97
+ + F + P + VL + L H D L+EGH D + S
Sbjct: 101 GIEIGIDAGILFHVGDAHLLPDALPVLERIAQALGPHATGDILVEGHTDSVPIANAKYES 160
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA AV YF RGI+ R+ P V G D + A+NRR +F+
Sbjct: 161 NWELSSARAGAVVRYFAERGIAPHRLAAVGRADTQPLVAGDDASSRARNRRVTIFV 216
>gi|308174663|ref|YP_003921368.1| flagellar motor rotation protein [Bacillus amyloliquefaciens DSM 7]
gi|307607527|emb|CBI43898.1| motility protein (flagellar motor rotation) [Bacillus
amyloliquefaciens DSM 7]
gi|328912997|gb|AEB64593.1| motility protein (flagellar motor rotation) [Bacillus
amyloliquefaciens LL3]
Length = 206
Score = 67.1 bits (162), Expect = 7e-10, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 43/130 (33%), Gaps = 5/130 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+ + + ++V F T + VL + L+ +EGH D
Sbjct: 77 MTAKRDERGVVLVLQEAVLFQTGKADVLKNAEPVLHQIAVLLKTLPNAIQVEGHTDSRRI 136
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
S+ L RA +V YF A+ + R Y P +NRR
Sbjct: 137 STYQFPSNWELSSARAASVIRYFTAKEDFSAKRFISVGYADTKPVKDNKSIRHMKENRRV 196
Query: 150 IVFLKGCRAN 159
+ +K ++
Sbjct: 197 EIVIKKTTSS 206
>gi|312130358|ref|YP_003997698.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132]
gi|311906904|gb|ADQ17345.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132]
Length = 444
Score = 67.1 bits (162), Expect = 7e-10, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRA 106
V + FD +S I+P V+ + + L+++ I GH D G S++ L +RA
Sbjct: 336 VTRGITFDVNSDKIKPESYGVIKEIATVLQENSGIRVKIVGHTDSDGDDKSNLTLSQKRA 395
Query: 107 YAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+V N+ + I A R++ G+ PS A NRR
Sbjct: 396 ASVKNFLTSEFKIDAERLETEGKGESEPSEPNTTPQGKANNRRVEFI 442
>gi|107026971|ref|YP_624482.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
gi|116691833|ref|YP_837366.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
HI2424]
gi|105896345|gb|ABF79509.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
gi|116649833|gb|ABK10473.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424]
Length = 223
Score = 67.1 bits (162), Expect = 7e-10, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 57/153 (37%), Gaps = 15/153 (9%)
Query: 16 MSISGIDNLDTKISSP----------DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPAD 65
+ + +D + + P + + + + F+ + P
Sbjct: 69 AATASVDAAKSDPAPPWLALLDSLKSNGRIALVKAPHGIEIGIDAKILFNVGDARLLPHS 128
Query: 66 IQVLSNLGSWLEKHDC-DFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISA 120
VL+ + L +H D L+EGH D + S+ L RA +V Y RG++
Sbjct: 129 SPVLNQIAQALSEHATGDILVEGHTDSVPIANAKYESNWELSSARAGSVVRYLTERGVAP 188
Query: 121 SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
R+ P V G D + A+NRR +F+
Sbjct: 189 HRLAAIGRADTQPLVAGDDAGSRARNRRVTIFV 221
>gi|262199634|ref|YP_003270843.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
gi|262082981|gb|ACY18950.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
Length = 291
Score = 67.1 bits (162), Expect = 7e-10, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 42/124 (33%), Gaps = 5/124 (4%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELG 93
L + + V F + + I ++ +G D + IEGH D +
Sbjct: 148 LKVKITDGRMILELPTDVLFASGRADLSEDGIVSITQIGEVLAAIPDRRYQIEGHTDNVP 207
Query: 94 S----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
S+ L RA V G+ S + S+G+ P + + NRR
Sbjct: 208 ISTARYPSNWELAAARALTVLKTLREAGMQGSTLSAASFGEFRPVASNNSDAGRRANRRI 267
Query: 150 IVFL 153
+ +
Sbjct: 268 EIVI 271
>gi|148553776|ref|YP_001261358.1| OmpA/MotB domain-containing protein [Sphingomonas wittichii RW1]
gi|148498966|gb|ABQ67220.1| OmpA/MotB domain protein [Sphingomonas wittichii RW1]
Length = 373
Score = 67.1 bits (162), Expect = 7e-10, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 1/105 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAY 107
VFFD I +L N + + GHAD+ GS ++ L RRA
Sbjct: 264 PFIVFFDWDKSDITAEAASILDNAANAYATTGQARVQLAGHADKSGSDQYNVGLSQRRAD 323
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
AV Y +G+ S + ++G+ P V D +NRR +
Sbjct: 324 AVKAYLAGKGVPDSAITTEAFGESRPLVDTADGVREPQNRRVEIT 368
>gi|325523698|gb|EGD01964.1| OmpA family protein [Burkholderia sp. TJI49]
Length = 226
Score = 67.1 bits (162), Expect = 7e-10, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 44/116 (37%), Gaps = 5/116 (4%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGS----RNS 97
+ + F+ + P VL + D L+EGH D + S
Sbjct: 109 GVEIGIDAKILFNVGDARLLPESAPVLDRIALALGAHATGDILVEGHTDRVPIANAKYES 168
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA +V Y RG++ R+ P V G D + A+NRR +F+
Sbjct: 169 NWELSSARAGSVVRYLAERGVAPHRLAAVGRADTQPLVAGDDAASRARNRRVTIFV 224
>gi|253701760|ref|YP_003022949.1| OmpA/MotB domain protein [Geobacter sp. M21]
gi|251776610|gb|ACT19191.1| OmpA/MotB domain protein [Geobacter sp. M21]
Length = 486
Score = 67.1 bits (162), Expect = 7e-10, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 52/132 (39%), Gaps = 2/132 (1%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGD-SVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CD 82
S+P ++ + VG +V F S + P + + + L+ +
Sbjct: 350 SESASAPQPIITADPSSVVGKTLVGTVTVLFAVDSSDVSPKYLGQIKKIADLLKANPGST 409
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
L+EGH D G+ ++ L LRRA + V G+ + V G P E
Sbjct: 410 ALVEGHTDNTGALRDNLKLSLRRAENLKRALVRYGVDPRLLAVKGEGSLQPVASNATEQG 469
Query: 143 YAKNRRAIVFLK 154
KNRRA+ ++
Sbjct: 470 RQKNRRAVTKVQ 481
>gi|86141821|ref|ZP_01060345.1| OmpA family protein [Leeuwenhoekiella blandensis MED217]
gi|85831384|gb|EAQ49840.1| OmpA family protein [Leeuwenhoekiella blandensis MED217]
Length = 653
Score = 67.1 bits (162), Expect = 7e-10, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 46/108 (42%), Gaps = 6/108 (5%)
Query: 52 VFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
++FD ++IRP + L+ + I H D G+ +++L +RA +
Sbjct: 543 IYFDFDRFNIRPDAAEELTKVLAVMESNPSLVVEIRSHTDSRGNDAYNLSLSDKRAKSTA 602
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGH-----DEDAYAKNRRAIVFL 153
++ V RGI SR+ +G+ E+ + NRR+ +
Sbjct: 603 DWIVNRGIEPSRISGEGFGETQLINDCGNGADCTEEQHQLNRRSEFIV 650
>gi|332307349|ref|YP_004435200.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332174678|gb|AEE23932.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 287
Score = 67.1 bits (162), Expect = 7e-10, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYA 108
+ + +S + + L+ +G +L++ L++G++D G R+ + L + RA
Sbjct: 180 ILAYQKNSTDLTKYSQRRLNMIGQYLKEDSDMELVLLDGYSDSYGGRDMNKTLSVSRAVE 239
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ NYF G++ R++VT +G+ +E + AKNRR ++
Sbjct: 240 IKNYFSEMGVAPQRIEVTGHGERRHIAPNSNEMSRAKNRRVVI 282
>gi|327404103|ref|YP_004344941.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
16823]
gi|327319611|gb|AEA44103.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
Length = 293
Score = 67.1 bits (162), Expect = 7e-10, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 46/115 (40%), Gaps = 6/115 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGS----RNSSIA 100
S+ D + F + S + P ++ L L + D L+EGH D + +
Sbjct: 164 VSMSDKLLFKSGSTGVEPKGVEALKVLADVLNKNPDIQILVEGHTDNVPIKTAVFKDNWD 223
Query: 101 LGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L + RA ++ + A +RM + G+ P + AKNRR + L
Sbjct: 224 LSVARATSITRMLNEKYAVAATRMTASGRGEYFPKASNDTTEGKAKNRRTEIILS 278
>gi|320354509|ref|YP_004195848.1| OmpA/MotB domain-containing protein [Desulfobulbus propionicus DSM
2032]
gi|320123011|gb|ADW18557.1| OmpA/MotB domain protein [Desulfobulbus propionicus DSM 2032]
Length = 212
Score = 67.1 bits (162), Expect = 7e-10, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 55/131 (41%), Gaps = 6/131 (4%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIE 86
+ + Q+ +++ +FFDT+S ++P L+ + + +E
Sbjct: 85 AMAQSEAASIRRDQDVLTATFKSDMFFDTNSSQLKPGAYNELNRITNVLNNYPQTTIRVE 144
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
GH D GS + L RRA AV N +G++ SR++ YG+ P A N
Sbjct: 145 GHTDARGSDQYNQQLSERRAMAVKNALAQQGVNPSRIEAVGYGESQPISSSD-----AMN 199
Query: 147 RRAIVFLKGCR 157
RR + + R
Sbjct: 200 RRVNIVINPIR 210
>gi|27382457|ref|NP_773986.1| hypothetical protein blr7346 [Bradyrhizobium japonicum USDA 110]
gi|27355628|dbj|BAC52611.1| blr7346 [Bradyrhizobium japonicum USDA 110]
Length = 316
Score = 67.1 bits (162), Expect = 7e-10, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 38/103 (36%), Gaps = 2/103 (1%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
++FDT ++P L + + + I GH D G+ ++ L RRA AV
Sbjct: 212 IYFDTDKAVLKPESRPTLEQIAKLLTSQPQLNVFIVGHTDSQGAYEYNLDLSKRRAEAVA 271
Query: 111 NYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
A R++ G P + A NRR +
Sbjct: 272 AELAKSFRIAQARLRTAGVGLLAPVGSNATDAGRALNRRVELV 314
>gi|328554593|gb|AEB25085.1| flagellar motor protein MotS [Bacillus amyloliquefaciens TA208]
Length = 206
Score = 67.1 bits (162), Expect = 7e-10, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 43/130 (33%), Gaps = 5/130 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+ + + ++V F T + VL + L+ +EGH D
Sbjct: 77 MTAKRDERGVVLVLQEAVLFQTGKADVLKNAEPVLHQIAVLLKTLPNAIQVEGHTDSRRI 136
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
S+ L RA +V YF A+ + R Y P +NRR
Sbjct: 137 STYQFPSNWELSSARAASVIRYFTAKEDFSAKRFISVGYADTKPVKDNKSIRHMKENRRV 196
Query: 150 IVFLKGCRAN 159
+ +K ++
Sbjct: 197 EIVIKKTTSS 206
>gi|330968986|gb|EGH69052.1| OmpA/MotB [Pseudomonas syringae pv. aceris str. M302273PT]
Length = 96
Score = 67.1 bits (162), Expect = 7e-10, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 36/83 (43%)
Query: 73 GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
E D ++EG+ D GS + + +L RRA +V V G+ +R+ YGKE
Sbjct: 2 AFLQENPDRKVIVEGYTDSTGSASYNQSLSERRANSVRMALVRMGVDPARVVTMGYGKEY 61
Query: 133 PSVYGHDEDAYAKNRRAIVFLKG 155
P A NRR V +
Sbjct: 62 PVADNTSNSGRAMNRRVEVTISN 84
>gi|326315314|ref|YP_004232986.1| OmpA/MotB domain-containing protein [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323372150|gb|ADX44419.1| OmpA/MotB domain protein [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 379
Score = 67.1 bits (162), Expect = 7e-10, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 48/132 (36%), Gaps = 1/132 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
+ ++++ +E Q + V V F T I P + + +
Sbjct: 245 ETKPLQVTAGLLPASELKAQIDKTGKVALHVNFATDKTDILPDSQPQIEQVVQLLRQDAS 304
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ G+ D G + L RA AV A+GI ASR+ +G P +
Sbjct: 305 LKLAVNGYTDNTGDAAHNKTLSEGRAKAVAAAVAAQGIDASRLSSAGFGAADPVADNATD 364
Query: 141 DAYAKNRRAIVF 152
+ AKNRR +
Sbjct: 365 EGKAKNRRVELV 376
>gi|319790060|ref|YP_004151693.1| OmpA/MotB domain protein [Thermovibrio ammonificans HB-1]
gi|317114562|gb|ADU97052.1| OmpA/MotB domain protein [Thermovibrio ammonificans HB-1]
Length = 254
Score = 67.1 bits (162), Expect = 7e-10, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 48/123 (39%), Gaps = 8/123 (6%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK----HDCDFLIEGHADE---- 91
+ + + V F +S + P + L + ++ + DE
Sbjct: 97 TENYVLIRLFNKVLFKQNSLELTPEAKRALDQIAKIIKNLKGNYMVRVEGHTSKDEPTVP 156
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ + S L +RRA V Y ++RG+ SR+ Y P ++ A+NRR +
Sbjct: 157 MPNIQDSWDLSIRRATTVVRYLISRGVDPSRLMAVGYDATRPLYTWNNPILQARNRRVEI 216
Query: 152 FLK 154
+++
Sbjct: 217 YIQ 219
>gi|113461178|ref|YP_719247.1| hemagglutinin antigen [Haemophilus somnus 129PT]
gi|112823221|gb|ABI25310.1| hemagglutinin antigen [Haemophilus somnus 129PT]
Length = 355
Score = 67.1 bits (162), Expect = 7e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 52/123 (42%), Gaps = 10/123 (8%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGL 103
S+ V F + +++P Q L + + + + G+ D +GS S++ L
Sbjct: 233 VFSLNSDVNFAFAKDTLKPEAQQTLDGVYGEIAQLKTAQVSVAGYTDRIGSDASNLKLSQ 292
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLK 154
RRA V NY V++G++ + YG+ P A++RR + +K
Sbjct: 293 RRADTVANYLVSKGVAQDAISAVGYGEANPVTGAKCDAVKGRKALIACLAEDRRVEISVK 352
Query: 155 GCR 157
G +
Sbjct: 353 GSK 355
>gi|254440083|ref|ZP_05053577.1| OmpA family protein [Octadecabacter antarcticus 307]
gi|198255529|gb|EDY79843.1| OmpA family protein [Octadecabacter antarcticus 307]
Length = 720
Score = 67.1 bits (162), Expect = 7e-10, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 33/84 (39%)
Query: 69 LSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L+ + D I GH D G ++ AL RA AV +ARG+ M +
Sbjct: 627 LAAVILPCVAADLTLDIGGHTDSSGDEPTNKALSQDRANAVRAALIARGVPDVAMTAFGF 686
Query: 129 GKEMPSVYGHDEDAYAKNRRAIVF 152
G+ P + A NRR +
Sbjct: 687 GQTQPIADNETPEGRAANRRTDIT 710
>gi|126662166|ref|ZP_01733165.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Flavobacteria bacterium BAL38]
gi|126625545|gb|EAZ96234.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Flavobacteria bacterium BAL38]
Length = 642
Score = 67.1 bits (162), Expect = 7e-10, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 6/113 (5%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
+++FD I + ++ L + D I+ H D S++ ++ L +RA
Sbjct: 530 QNIYFDLDKSEINDKAEKQIAILLYVMQKNPDIKLEIKSHTDSRASKSYNLELSNKRALE 589
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHD-----EDAYAKNRRAIVFLKGC 156
N+ V GI +SR+ YG+ + D E+ + NRR+ + G
Sbjct: 590 TSNWLVKNGIDSSRISSKGYGESRLVNHCSDGVKCSEEEHQMNRRSEFIVIGN 642
>gi|298209046|ref|YP_003717225.1| putative flagellar motor protein MotB [Croceibacter atlanticus
HTCC2559]
gi|83848973|gb|EAP86842.1| putative flagellar motor protein MotB [Croceibacter atlanticus
HTCC2559]
Length = 286
Score = 67.1 bits (162), Expect = 7e-10, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 62/148 (41%), Gaps = 8/148 (5%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
++T+ ++ + ++ D +N S+ D + F + SY++ +VL
Sbjct: 120 SVTLALVTSLKGALGNMADEDIEINVEKGVVY--VSISDKLLFKSGSYNVTSRAKEVLGK 177
Query: 72 LGSWLE-KHDCDFLIEGHADELGSRN----SSIALGLRRAYAVFNYFV-ARGISASRMKV 125
+ + + K D +F++EGH D + +N + L +RA +V G+ RM
Sbjct: 178 VATVVNAKPDIEFMVEGHTDNVPIKNAVLEDNWDLSAKRATSVVRILQDEYGVPPQRMTA 237
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+P + AKNRR + +
Sbjct: 238 AGRSYYIPVASNDTAEGRAKNRRTRIVV 265
>gi|332092496|gb|EGI97569.1| outer membrane protein A [Shigella boydii 5216-82]
gi|332095872|gb|EGJ00879.1| outer membrane protein A [Shigella dysenteriae 155-74]
Length = 351
Score = 67.1 bits (162), Expect = 7e-10, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 60/158 (37%), Gaps = 12/158 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + +S + + ++ V F+ + +++P L
Sbjct: 186 GLLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLKSDVLFNFNKATLKPEGQAALDQ 245
Query: 72 LGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L S L + D ++ G+ D +GS + L RRA +V +Y +++GI A ++
Sbjct: 246 LYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRAQSVVDYLISKGIPADKISARGI 305
Query: 129 GKEMPS--VYGHDEDAYAK-------NRRAIVFLKGCR 157
G+ P + A +RR + +KG +
Sbjct: 306 GESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKGIK 343
>gi|228469678|ref|ZP_04054646.1| immunogenic 23 kDa lipoprotein PG3 [Porphyromonas uenonis 60-3]
gi|228308697|gb|EEK17423.1| immunogenic 23 kDa lipoprotein PG3 [Porphyromonas uenonis 60-3]
Length = 225
Score = 67.1 bits (162), Expect = 7e-10, Method: Composition-based stats.
Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 2/134 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDS-VFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
+ + P+ ES Q V DS + F+TSS ++ + L L K+
Sbjct: 76 QKKELEQQLPEGTQVESVNDGQAIKVVFDSGLLFNTSSSTLSSSSRNDLRKFADNLNKNH 135
Query: 81 CDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
I GH D G+ + L RA +V ++ +G+S++RMK G P
Sbjct: 136 DTVLEIIGHTDSSGNDRINDPLSRDRAKSVRDFLEGQGVSSTRMKYEGRGSHEPVDTNAT 195
Query: 140 EDAYAKNRRAIVFL 153
+ KNRR VF+
Sbjct: 196 AEGKRKNRRVEVFI 209
>gi|144897998|emb|CAM74862.1| conserved hypothetical protein, secreted [Magnetospirillum
gryphiswaldense MSR-1]
Length = 198
Score = 67.1 bits (162), Expect = 7e-10, Method: Composition-based stats.
Identities = 41/147 (27%), Positives = 65/147 (44%), Gaps = 10/147 (6%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDS--------VFFDTSSYSIRPADIQV 68
S +G D D K + V E +Q++F ++ ++F S + P +
Sbjct: 53 SGTGADRADAKPADVFAV-PEKDIQDRFGQAIKAQPRTPKSFLLYFQFQSTDLTPESKAL 111
Query: 69 LSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
L ++ ++ D I GH D +G + LGLRRA V + A GI ++VTS
Sbjct: 112 LPSVLDEVKARPAPDLSIIGHTDGMGDAKYNYELGLRRAKEVQSMVTALGIEPRMIEVTS 171
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+G+ P V AKNRR V ++
Sbjct: 172 HGQSNPLVPEAKGKGEAKNRRVEVTVR 198
>gi|124004937|ref|ZP_01689780.1| peptidoglycan-associated cytoplasmic membrane protein, putative
[Microscilla marina ATCC 23134]
gi|123989615|gb|EAY29161.1| peptidoglycan-associated cytoplasmic membrane protein, putative
[Microscilla marina ATCC 23134]
Length = 693
Score = 67.1 bits (162), Expect = 7e-10, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 1/110 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
VFFD S +I+ + L L S+ + D + ++ GHAD+ G+ + L RA V
Sbjct: 580 VFFDYKSDNIKKEHEKDLEKLVSYLISNPDANLVLNGHADQTGTETRNKQLSSDRARKVM 639
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
Y + R I+ +R+ + ++G++ +E A+NRR + A+T
Sbjct: 640 EYLIGRDINPNRVTLKAWGEQKLIDKRDNEKGRARNRRVECEIISSEAST 689
>gi|159185884|ref|NP_356875.2| hypothetical protein Atu3746 [Agrobacterium tumefaciens str. C58]
gi|159141018|gb|AAK89660.2| flagellar motor protein [Agrobacterium tumefaciens str. C58]
Length = 261
Score = 67.1 bits (162), Expect = 7e-10, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 40/102 (39%), Gaps = 5/102 (4%)
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG-----SRNSSIALGLRRAYAVFN 111
+ +L + + ++GH D + + L RA +V
Sbjct: 157 GQAEMAKLATALLDLAKEIPAEINWVLRVDGHTDNVQLTGSGRYRDNWELSSARATSVVK 216
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +++G+ A+R+ +G+ P G +A +NRR + L
Sbjct: 217 FLISKGVPANRLVAAGFGEYQPIAEGDSPEARQQNRRIELKL 258
>gi|145299432|ref|YP_001142273.1| sodium-type polar flagellum motor protein [Aeromonas salmonicida
subsp. salmonicida A449]
gi|142852204|gb|ABO90525.1| sodium-type polar flagellum motor protein [Aeromonas salmonicida
subsp. salmonicida A449]
Length = 291
Score = 67.1 bits (162), Expect = 7e-10, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYAVFN 111
+D +S + A + L+ +G +++ +I ++D G R + L +RA A+
Sbjct: 184 YDKNSDQLSLASRRRLAMIGEYVKVDKSIDVVVINAYSDSYGGRWPNQKLSEKRADAIKK 243
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
FV GI ++ V +G++ + ED AKNRR ++
Sbjct: 244 VFVDLGIDPGKISVEGHGEKRHATSNETEDGRAKNRRVVI 283
>gi|45659294|ref|YP_003380.1| peptidoglycan-associated cytoplasmic membrane protein [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
gi|45602540|gb|AAS72017.1| peptidoglycan-associated cytoplasmic membrane protein [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
Length = 428
Score = 67.1 bits (162), Expect = 7e-10, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYA 108
DS+ F SY I +L NL S+L+++ + I GH D G ++ L RA A
Sbjct: 321 DSIHFSLGSYEILENSFSILDNLNSYLKENLNIKIKITGHTDLNGDSQDNLILSRNRANA 380
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V +Y V RGI + R+ G P V + + KNRR +
Sbjct: 381 VKDYLVKRGIDSQRIITDGKGSSEPIVPMKNPETDYKNRRTEFQI 425
>gi|28900403|ref|NP_800058.1| hypothetical protein VPA0548 [Vibrio parahaemolyticus RIMD 2210633]
gi|308095573|ref|ZP_05906887.2| OmpA family protein [Vibrio parahaemolyticus Peru-466]
gi|308125408|ref|ZP_05775064.2| OmpA family protein [Vibrio parahaemolyticus K5030]
gi|308126617|ref|ZP_05911271.2| OmpA family protein [Vibrio parahaemolyticus AQ4037]
gi|28808714|dbj|BAC61891.1| putative protein F-related protein [Vibrio parahaemolyticus RIMD
2210633]
gi|308085093|gb|EFO34788.1| OmpA family protein [Vibrio parahaemolyticus Peru-466]
gi|308107912|gb|EFO45452.1| OmpA family protein [Vibrio parahaemolyticus AQ4037]
gi|308113845|gb|EFO51385.1| OmpA family protein [Vibrio parahaemolyticus K5030]
Length = 208
Score = 67.1 bits (162), Expect = 7e-10, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 1/111 (0%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALG 102
+ + V F T S + L LG +L + D D +I+GHAD G+ + + L
Sbjct: 94 LMIRLKEQVHFQTGSAQLSSNSQDWLRKLGHYLAGRTDVDVVIDGHADSTGAASFNDTLS 153
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+RA V +A I R+ +G+ +P A NRR + L
Sbjct: 154 EKRAREVEKQMLASSIPRQRVFSRGFGEYVPQCSNATSSGKACNRRVELML 204
>gi|317402072|gb|EFV82666.1| hypothetical protein HMPREF0005_00359 [Achromobacter xylosoxidans
C54]
Length = 495
Score = 67.1 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 34/156 (21%), Positives = 56/156 (35%), Gaps = 19/156 (12%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDS-VFFDTSSYSIRPADIQVLSNLGS 74
++ + +D L T + + S S+ D F S + P + +++L
Sbjct: 68 VADTQVDPLATPKPQGGGSADAAKTTAGLSVSIIDKGEQFAPGSAILTPQAAKAMADLAD 127
Query: 75 WLE------------------KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
+ L+ GH D+ GS + L RA AV FV+R
Sbjct: 128 TYRDVAAASASAKDRDAVNARNNAMRILLVGHTDDTGSSQLNADLSEARARAVAKIFVSR 187
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
G A ++ G+ +P H A+NRR V
Sbjct: 188 GFRADQIFYQGAGETLPIADNHSAAGRARNRRVEVV 223
>gi|325105320|ref|YP_004274974.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
gi|324974168|gb|ADY53152.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
Length = 278
Score = 67.1 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 48/131 (36%), Gaps = 7/131 (5%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHA 89
D L + S+ D + F + S I Q L L L + +EGH
Sbjct: 137 QDKGLTVEMRDGKVYVSLTDKLLFASGSIVIDERGKQALHELAVILNTQPEINIAVEGHT 196
Query: 90 DELG-----SRNSSIALGLRRAYAVFNYFV-ARGISASRMKVTSYGKEMPSVYGHDEDAY 143
D + L + RA +V + IS +R+ T G+ P + ++
Sbjct: 197 DNQRVVNLGQIKDNWDLSVLRATSVVRFLTVDEKISPNRIMATGKGEFQPISTDNSAESR 256
Query: 144 AKNRRAIVFLK 154
+KNRR + L
Sbjct: 257 SKNRRIEIVLS 267
>gi|313681736|ref|YP_004059474.1| ompa/motb domain protein [Sulfuricurvum kujiense DSM 16994]
gi|313154596|gb|ADR33274.1| OmpA/MotB domain protein [Sulfuricurvum kujiense DSM 16994]
Length = 282
Score = 67.1 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 42/136 (30%), Gaps = 7/136 (5%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE--KHD 80
D K +S + + S+ F ++ L + +
Sbjct: 120 QQDLKNASMGSGPLDQSMDGVLLKLPTSIPFKGANATIDNEELHLFLRRVTDIINTLPPT 179
Query: 81 CDFLIEGHADELG-----SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
D I G+ D +I L RRA V + G++ R+ +G P
Sbjct: 180 VDISIRGYTDNQPLPPGAGYKDNIELSSRRAETVMRELIRNGVAPERLSTAGFGAAKPVA 239
Query: 136 YGHDEDAYAKNRRAIV 151
E+ AKNRR
Sbjct: 240 ENTTEENRAKNRRVEF 255
>gi|296162992|ref|ZP_06845769.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
gi|295886786|gb|EFG66627.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
Length = 248
Score = 67.1 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 40/112 (35%), Gaps = 1/112 (0%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIAL 101
Q + + F T S + P + L + S + + + G+ D GS ++ L
Sbjct: 134 QVRLLLQGNANFATDSAMLSPIAKKNLDHFMSVNQGINLHRLTVVGYTDATGSEAHNLNL 193
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA AV Y G+ + G P + +NRR V +
Sbjct: 194 SQARAAAVVQYLRDGGLHVDQFVARGLGSADPVASNATAEGRMQNRRVDVRV 245
>gi|320179525|gb|EFW54477.1| Outer membrane protein A precursor [Shigella boydii ATCC 9905]
Length = 342
Score = 67.1 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 29/158 (18%), Positives = 60/158 (37%), Gaps = 12/158 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + +S + + ++ V F+ + +++P L
Sbjct: 177 GLLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLKSDVLFNFNKATLKPEGQAALDQ 236
Query: 72 LGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L S L + D ++ G+ D +GS + L RRA +V +Y +++GI A ++
Sbjct: 237 LYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSERRAQSVVDYLISKGIPADKISARGI 296
Query: 129 GKEMPS--VYGHDEDAYAK-------NRRAIVFLKGCR 157
G+ P + A +RR + +KG +
Sbjct: 297 GESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKGIK 334
>gi|304383212|ref|ZP_07365685.1| OmpA family protein [Prevotella marshii DSM 16973]
gi|304335683|gb|EFM01940.1| OmpA family protein [Prevotella marshii DSM 16973]
Length = 278
Score = 67.1 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 6/114 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHAD----ELGSRNSSIA 100
S+ D++ + + SY I + LS + + + D D LIEG+ D + ++
Sbjct: 147 ISLADNMLYKSGSYEINDRAAETLSKIAKIITDYKDYDVLIEGNTDNVPISRENIRNNWD 206
Query: 101 LGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V Y R + RM G+ P +NRR + +
Sbjct: 207 LSCLRASSVVQYLQTRYGVDPKRMTAGGRGEYNPLSDNSTALGKQRNRRTQIII 260
>gi|254292855|ref|YP_003058878.1| OmpA/MotB domain protein [Hirschia baltica ATCC 49814]
gi|254041386|gb|ACT58181.1| OmpA/MotB domain protein [Hirschia baltica ATCC 49814]
Length = 222
Score = 67.1 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 1/124 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHAD 90
+T + + + + + + F T I VL ++G L++ D + I+GH D
Sbjct: 95 ETGVGVTRVGDTIQLVMPGDITFATGRAEINNQFDYVLQDVGLVLQEFDKTVVFIDGHTD 154
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
+GS + L RA V + GI R+ VT YG+ V D NRR
Sbjct: 155 TVGSYQKNDELSQARANNVAARLMQEGILGGRLVVTGYGESRLKVPTGDGVNEPLNRRVE 214
Query: 151 VFLK 154
+ L+
Sbjct: 215 IRLE 218
>gi|13472147|ref|NP_103714.1| hypothetical protein mlr2348 [Mesorhizobium loti MAFF303099]
gi|14022892|dbj|BAB49500.1| mlr2348 [Mesorhizobium loti MAFF303099]
Length = 442
Score = 67.1 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 21/141 (14%), Positives = 43/141 (30%), Gaps = 8/141 (5%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEK 78
ES + + F +S ++ ++ ++ ++
Sbjct: 299 KAEAPASLKDALSGTESVSLAKLIIQSSNPELFQSSRPTLSQGYEPLIQSIAKVILANQE 358
Query: 79 HDCDFLIEGHADELGSRNSS-----IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
+ I GH D + + S+ L RA + + V G+ R+ P
Sbjct: 359 LIGNITIVGHTDNVRLQRSNPLASNQRLSEARAQTIADLLVQAGVPQERIHSEGRADSDP 418
Query: 134 SVYGHDEDAYAKNRRAIVFLK 154
+ A NRR V ++
Sbjct: 419 VADNSTREGRALNRRVEVLVE 439
>gi|260773224|ref|ZP_05882140.1| sodium-type flagellar protein MotY precursor [Vibrio metschnikovii
CIP 69.14]
gi|260612363|gb|EEX37566.1| sodium-type flagellar protein MotY precursor [Vibrio metschnikovii
CIP 69.14]
Length = 325
Score = 67.1 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
+S + A + L+ + ++ + L+ + D RN S +L RRA ++ YF
Sbjct: 222 NSVELNKASQKRLAQIADYIRYNQDIDLVLVATYTDTSEGRNESQSLSERRAESLQRYFR 281
Query: 115 ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G+ R++V YG+ P KNRR ++ L
Sbjct: 282 TLGLPEDRIQVQGYGQRRPIADNASPIGRDKNRRVVISL 320
>gi|223041650|ref|ZP_03611847.1| hypothetical protein AM202_0258 [Actinobacillus minor 202]
gi|223017514|gb|EEF15928.1| hypothetical protein AM202_0258 [Actinobacillus minor 202]
Length = 162
Score = 67.1 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 47/160 (29%), Gaps = 9/160 (5%)
Query: 1 MQYSTIFIILSAITMMSISGIDNL-DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSY 59
M+ + + ++ N D + V ++ FD
Sbjct: 2 MKLLKLATTSALAALLVGCAQSNNLDAPAPAVAPVKEAPVTAPAKEFTLSGDFLFDFDKS 61
Query: 60 SIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI 118
+ L+ + ++ + G+ D LGS + L RA Y ++G+
Sbjct: 62 VLSAKGKSTLNGIAKEIKDTGAKNVTVTGYTDRLGSATYNQKLSQARANTTKAYLQSQGV 121
Query: 119 SASRMKVTSYGKEMPSVYGHDEDAYAK------NRRAIVF 152
SA +K G E A NRR +
Sbjct: 122 SA-NIKAVGRGAANQVKACKGETGQALKDCLKPNRRVHII 160
>gi|328469233|gb|EGF40179.1| hypothetical protein VP10329_10131 [Vibrio parahaemolyticus 10329]
Length = 301
Score = 67.1 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 33/158 (20%), Positives = 56/158 (35%), Gaps = 9/158 (5%)
Query: 1 MQYSTIFII-LSAITMMSISGIDN-------LDTKISSPDTVLNESSLQEQFSSSVGDSV 52
M+ + + + +++ + + L L Q + +
Sbjct: 1 MKTTIRLLSGIMIGALLAGCATETYVSQENREKFSDVNVSKFLISECLAPQREIHIAVAE 60
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FD + IR AD L ++ I GH D GS + AL LRRA +V Y
Sbjct: 61 HFDFDKFKIREADATSLDAFIRDIQGLSGRITIVGHTDYKGSNEYNDALSLRRAQSVAAY 120
Query: 113 FVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRA 149
+ ++ +G+ P + A A+NRRA
Sbjct: 121 LKQQLDPTFYDWEIKHFGETQPLTLDTSDQARAENRRA 158
Score = 56.7 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FD ++ D+ L + L+ + L+ GH D++GS + + L RRA V Y
Sbjct: 190 HFDFDQSELKAEDLTQLDDFIEQLQGLEGSILVAGHTDQVGSLSYNEKLAERRAQTVAEY 249
Query: 113 FVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ ++ +V ++G+ P + +A A NRRA + K
Sbjct: 250 LKTKLDASRLVWEVKAFGELQPVINQTTSEANALNRRAFIVFK 292
>gi|254489059|ref|ZP_05102263.1| type IV / VI secretion system protein, DotU family [Roseobacter sp.
GAI101]
gi|214042067|gb|EEB82706.1| type IV / VI secretion system protein, DotU family [Roseobacter sp.
GAI101]
Length = 478
Score = 67.1 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 50/128 (39%), Gaps = 6/128 (4%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
+ S + + +G+++ F + + +++ + + LE ++EGH+D
Sbjct: 346 AAGLTTVSEEGDFIAVRLGEALQFGEGAAVLASES-PIIARIATVLENEPGSIIVEGHSD 404
Query: 91 ELG-----SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ ++ L RA AV + RM V G P V +A ++
Sbjct: 405 NIPLSGRGRYKTNEELSAARAAAVSDVLAQYMSDPDRMTVEGAGASKPLVRADTPEARSR 464
Query: 146 NRRAIVFL 153
NRR + L
Sbjct: 465 NRRVDILL 472
>gi|187477259|ref|YP_785283.1| hypothetical protein BAV0750 [Bordetella avium 197N]
gi|115421845|emb|CAJ48363.1| probable outer membrane protein [Bordetella avium 197N]
Length = 216
Score = 67.1 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 46/116 (39%), Gaps = 10/116 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD----FLIEGHADELGSRNSS--- 98
+ SV F +S ++P ++L +L L+ + ++ G D +
Sbjct: 85 IGISGSVLFALNSDQLQPEGRELLMSLAEPLKTYLQSRDEILMVSGFTDNQRVSEHNRRF 144
Query: 99 ---IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
L +RA V + GI AS + ++G E P D + AKNRR +
Sbjct: 145 SDNWELSAQRALTVTRALIDAGIPASSLFAAAFGSEQPVASNDDAEGQAKNRRVEI 200
>gi|325297821|ref|YP_004257738.1| OmpA/MotB domain-containing protein [Bacteroides salanitronis DSM
18170]
gi|324317374|gb|ADY35265.1| OmpA/MotB domain protein [Bacteroides salanitronis DSM 18170]
Length = 239
Score = 67.1 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 53/144 (36%), Gaps = 12/144 (8%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW--L 76
+ + + + V + + LQ + + F TSS + + LS + +
Sbjct: 79 AAEQAAQIEGAEVEQVTDNNGLQA-VKVTFDSGILFATSSSDLSTSAKSALSKFANNVLI 137
Query: 77 EKHDCDFLIEGHADEL--------GSRNSSIALGLRRAYAVFNYFVARGISASRMKVT-S 127
+ D D I G+ D S ++ L RA +V NY G + S++K
Sbjct: 138 QNPDMDVAIYGYTDNTGWKNSTAEQSVQKNLELSQSRAQSVSNYLRECGTTTSQIKTVEG 197
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIV 151
G+ P E +NRR V
Sbjct: 198 LGESNPVADNSTEAGRQENRRVEV 221
>gi|153837358|ref|ZP_01990025.1| putative protein F-related protein [Vibrio parahaemolyticus AQ3810]
gi|308094490|ref|ZP_05889709.2| OmpA family protein [Vibrio parahaemolyticus AN-5034]
gi|149749273|gb|EDM60052.1| putative protein F-related protein [Vibrio parahaemolyticus AQ3810]
gi|308090642|gb|EFO40337.1| OmpA family protein [Vibrio parahaemolyticus AN-5034]
Length = 225
Score = 67.1 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 1/111 (0%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALG 102
+ + V F T S + L LG +L + D D +I+GHAD G+ + + L
Sbjct: 111 LMIRLKEQVHFQTGSAQLSSNSQDWLRKLGHYLAGRTDVDVVIDGHADSTGAASFNDTLS 170
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+RA V +A I R+ +G+ +P A NRR + L
Sbjct: 171 EKRAREVEKQMLASSIPRQRVFSRGFGEYVPQCSNATSSGKACNRRVELML 221
>gi|322420089|ref|YP_004199312.1| hypothetical protein GM18_2585 [Geobacter sp. M18]
gi|320126476|gb|ADW14036.1| conserved repeat domain protein [Geobacter sp. M18]
Length = 1890
Score = 67.1 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 2/102 (1%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFN 111
F + ++LS L + ++EGH D +G+ ++AL RR A
Sbjct: 1619 AFIFDKSVLTTEAKRLLSGAARVLRERPRERVILEGHTDGIGTVEYNMALSKRRCDAAAE 1678
Query: 112 YFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
Y + G++ SR+ YGK P NRR +
Sbjct: 1679 YLIRVEGVAPSRLLRRWYGKSRPVADNVTTSGRRLNRRVELK 1720
>gi|163742214|ref|ZP_02149602.1| OmpA family protein [Phaeobacter gallaeciensis 2.10]
gi|161384544|gb|EDQ08925.1| OmpA family protein [Phaeobacter gallaeciensis 2.10]
Length = 211
Score = 67.1 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 40/138 (28%), Positives = 59/138 (42%), Gaps = 4/138 (2%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
G L +F+ V ++ F S + VL W+ +
Sbjct: 34 GNATNSNAAVMAGERDFAIQLATRFAEEVPTTITFAFDSAQLDGNAHAVLDQQAHWIRQF 93
Query: 80 D-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT-SYGKEMPSVYG 137
F + GH D +GS + + ALGLRRA A NY V RGIS SR++ S+G+ P +
Sbjct: 94 PEVRFRVFGHTDAVGSASYNKALGLRRARAAVNYLVGRGISRSRLQAVVSFGETQPLIPT 153
Query: 138 HDEDAYAKNRRAIVFLKG 155
D + NRR + + G
Sbjct: 154 SDRERR--NRRTVTEVSG 169
>gi|218885922|ref|YP_002435243.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218756876|gb|ACL07775.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 244
Score = 67.1 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 28/113 (24%), Positives = 43/113 (38%), Gaps = 6/113 (5%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGS-----RNSSIAL 101
+ V F + P + L L ++ K D I G D+ + L
Sbjct: 127 IPAEVMFAPGETDLSPQAERYLKPLADLFVRKKDQSINIRGFTDDSQPGQNSRFRDNWEL 186
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RA +V YF+ GI + R+ T G+ P E+ A+NRR L+
Sbjct: 187 SSLRAVSVLRYFLKAGIDSKRLTATGLGELDPLFPNTTEENRARNRRVEFMLE 239
>gi|209526860|ref|ZP_03275380.1| OmpA/MotB domain protein [Arthrospira maxima CS-328]
gi|209492731|gb|EDZ93066.1| OmpA/MotB domain protein [Arthrospira maxima CS-328]
Length = 285
Score = 67.1 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 47/137 (34%), Gaps = 2/137 (1%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+ I P S ++ + F+ S ++RP +L NL L+
Sbjct: 146 APSSPEAENIPPPTPRTARSRSGSGLIMTLPSDILFNPGSSTLRPGANVILDNLIPDLQN 205
Query: 79 HD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVY 136
+ + GH D+ R ++ L +A AV Y A YG P++
Sbjct: 206 YRGAVVRVAGHTDDSARRQQNLVLSSAQAEAVVQYLSNAVDYQAYHWVAIGYGMTRPALE 265
Query: 137 GHDEDAYAKNRRAIVFL 153
+ NRR V +
Sbjct: 266 NTSDINRQLNRRIEVAI 282
>gi|149279859|ref|ZP_01885986.1| putative flagellar motor protein MotB [Pedobacter sp. BAL39]
gi|149229449|gb|EDM34841.1| putative flagellar motor protein MotB [Pedobacter sp. BAL39]
Length = 289
Score = 67.1 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 6/114 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHAD----ELGSRNSSIA 100
S+ D++ + + SY I Q L+ + ++ + D LIEG+ D + ++
Sbjct: 154 ISLSDNMLYKSGSYEISDVAGQTLAKIAKIIKDYQGYDVLIEGNTDNVPISQTNIRNNWD 213
Query: 101 LGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V + R+ G+ P E KNRR + +
Sbjct: 214 LSALRASSVVQALQNTYSVDPKRLTAGGRGEYNPVAGNDSEAGKMKNRRTQIII 267
>gi|153832375|ref|ZP_01985042.1| outer membrane protein [Vibrio harveyi HY01]
gi|148871404|gb|EDL70267.1| outer membrane protein [Vibrio harveyi HY01]
Length = 284
Score = 67.1 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 52/141 (36%), Gaps = 1/141 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
+ + ++ ++ + F S I P + L+ L H
Sbjct: 134 SQTTCKPPQDIEALRSDLNIVANIYDLLNVDNQFAVDSAEINPKYMGHLAEAAYILRDHP 193
Query: 81 -CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
++ GHAD G+ + L RA V Y GI++ R++ S G+ +P G
Sbjct: 194 SLSLVVTGHADATGTPEYNQKLAQDRAEQVKRYLNVFGITSDRVQTKSVGETLPLYDGQT 253
Query: 140 EDAYAKNRRAIVFLKGCRANT 160
NRR + + +++T
Sbjct: 254 PAVRLTNRRVSIEVLNAKSDT 274
>gi|24217036|ref|NP_714517.1| OmpA family protein [Leptospira interrogans serovar Lai str. 56601]
gi|24198445|gb|AAN51535.1| OmpA family protein [Leptospira interrogans serovar Lai str. 56601]
Length = 428
Score = 67.1 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYA 108
DS+ F SY I +L NL S+L+++ + I GH D G ++ L RA A
Sbjct: 321 DSIHFSLGSYEILENSFSILDNLNSYLKENLNIKIKITGHTDLNGDSQDNLILSRNRANA 380
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V +Y V RGI + R+ G P V + + KNRR +
Sbjct: 381 VKDYLVKRGIDSQRIITDGKGSSEPIVPMKNPETDYKNRRTEFQI 425
>gi|332715427|ref|YP_004442893.1| OmpA-like porin [Agrobacterium sp. H13-3]
gi|325062112|gb|ADY65802.1| OmpA-like porin [Agrobacterium sp. H13-3]
Length = 503
Score = 67.1 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 44/131 (33%), Gaps = 5/131 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ ++ + + + + +S F T S + P ++ +G L ++
Sbjct: 343 QPEVDRKLVTLADVNGRLRVRINNSGLFTTGSADVSPQFRDLIQRIGGALAAEKFRAVVI 402
Query: 87 GHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
G+ D + S+ L RA AV + ++ + P E+
Sbjct: 403 GYTDTVPIKTVEFPSNWHLSEARAKAVGDIL-SQFTGPEAILTEGRADSDPIADNKTEEG 461
Query: 143 YAKNRRAIVFL 153
NRR + +
Sbjct: 462 RQINRRTEIMV 472
>gi|291567193|dbj|BAI89465.1| OmpA/MotB domain protein [Arthrospira platensis NIES-39]
Length = 285
Score = 67.1 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 49/137 (35%), Gaps = 2/137 (1%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+ I P S ++ + F+ S ++RP +L NL L+
Sbjct: 146 APSSPEAENIPPPTPRTARSRSGNGLIMTLPSDILFNPGSSTLRPGANVILDNLIPDLQN 205
Query: 79 HD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVY 136
+ + GH D+ GSR ++ L +A A+ Y A YG P++
Sbjct: 206 YRGAVVRVAGHTDDSGSRQQNLVLSSAQAEAIVQYLSNAVDDQAYHWVAIGYGMTRPALE 265
Query: 137 GHDEDAYAKNRRAIVFL 153
+ NRR V +
Sbjct: 266 NTSDINRQLNRRIEVAI 282
>gi|124005217|ref|ZP_01690059.1| outer membrane protein [Microscilla marina ATCC 23134]
gi|123989469|gb|EAY29030.1| outer membrane protein [Microscilla marina ATCC 23134]
Length = 687
Score = 67.1 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYA 108
+++FF S + P L+ L ++++ +EGH + G++ + L +R +
Sbjct: 580 NNIFFSRGSARLLPESYPELNRLAKAMKENPTMRIRLEGHTEIFGNKKFLMNLSKQRVKS 639
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V Y +GI+ R+K+ +G + P DE + A NRR V +
Sbjct: 640 VQKYLSEKGINDRRVKLKGFGYKRPLSRKKDEKSRALNRRVEVRI 684
>gi|83949565|ref|ZP_00958298.1| OmpA domain protein [Roseovarius nubinhibens ISM]
gi|83837464|gb|EAP76760.1| OmpA domain protein [Roseovarius nubinhibens ISM]
Length = 333
Score = 67.1 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 47/138 (34%), Gaps = 2/138 (1%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
+ + + + + + F T S ++ P L+ L ++L+
Sbjct: 192 GTATPPTPSAPITGGAPGEITEQLMSQGHGILGDLDFATGSATLGPGPFASLTALAAYLK 251
Query: 78 KHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSV 135
+ GH D G R+ +I++ +RA AV + V +++ G P
Sbjct: 252 GDGARRIALVGHTDATGGRDINISISRQRARAVLDRLVEGHGVPRAQLEADGVGYLAPIA 311
Query: 136 YGHDEDAYAKNRRAIVFL 153
E NRR L
Sbjct: 312 SNLTEAGRQANRRVEAVL 329
>gi|320156881|ref|YP_004189260.1| sodium-type flagellar protein motY [Vibrio vulnificus MO6-24/O]
gi|319932193|gb|ADV87057.1| sodium-type flagellar protein motY precursor [Vibrio vulnificus
MO6-24/O]
Length = 254
Score = 66.8 bits (161), Expect = 8e-10, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYA 108
+ ++ + + A + LS + ++ + L+ + D + S L RRA +
Sbjct: 145 ILHYERNGDKLTKASQKRLSQIAEYVRYNSDIDLVLVSTYTDSTDGTSVSQNLSERRAES 204
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +YF A G++ R++V YGK P KNRR ++ L
Sbjct: 205 LRDYFKALGLTEDRIQVQGYGKRRPIADNATPIGKDKNRRVVISL 249
>gi|253701635|ref|YP_003022824.1| OmpA/MotB domain protein [Geobacter sp. M21]
gi|251776485|gb|ACT19066.1| OmpA/MotB domain protein [Geobacter sp. M21]
Length = 432
Score = 66.8 bits (161), Expect = 8e-10, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 2/102 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
++ FDT+ ++P L L + E + +IEGH D +G + ++ L RA +
Sbjct: 323 NIQFDTNKADLKPQYRAELKALADFLNEFPNATGVIEGHTDNVGPKALNMKLSQLRADKI 382
Query: 110 FNYFVARGIS-ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
N + R+K YG P D+ AKNRR
Sbjct: 383 RNSLIKEFGIAPERIKAIGYGPAKPVASNKDKAGKAKNRRIE 424
>gi|28901295|ref|NP_800950.1| hypothetical protein VPA1440 [Vibrio parahaemolyticus RIMD 2210633]
gi|153835951|ref|ZP_01988618.1| OmpA family protein [Vibrio parahaemolyticus AQ3810]
gi|260362852|ref|ZP_05775721.1| OmpA family protein [Vibrio parahaemolyticus K5030]
gi|260880140|ref|ZP_05892495.1| OmpA family protein [Vibrio parahaemolyticus AN-5034]
gi|260895257|ref|ZP_05903753.1| OmpA family protein [Vibrio parahaemolyticus Peru-466]
gi|260900609|ref|ZP_05909004.1| OmpA family protein [Vibrio parahaemolyticus AQ4037]
gi|28809808|dbj|BAC62783.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
gi|149750705|gb|EDM61450.1| OmpA family protein [Vibrio parahaemolyticus AQ3810]
gi|308085641|gb|EFO35336.1| OmpA family protein [Vibrio parahaemolyticus Peru-466]
gi|308091737|gb|EFO41432.1| OmpA family protein [Vibrio parahaemolyticus AN-5034]
gi|308107011|gb|EFO44551.1| OmpA family protein [Vibrio parahaemolyticus AQ4037]
gi|308112285|gb|EFO49825.1| OmpA family protein [Vibrio parahaemolyticus K5030]
Length = 301
Score = 66.8 bits (161), Expect = 8e-10, Method: Composition-based stats.
Identities = 33/158 (20%), Positives = 57/158 (36%), Gaps = 9/158 (5%)
Query: 1 MQYSTIFII-LSAITMMSISGIDN-------LDTKISSPDTVLNESSLQEQFSSSVGDSV 52
M+ + + + +++ + + L L Q + +
Sbjct: 1 MKTTIRLLSGIMLGALLTGCATETYVSQENREKFSDVNVSKFLISECLAPQREIHIAVAE 60
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FD ++IR AD L ++ I GH D GS + AL LRRA +V Y
Sbjct: 61 HFDFDKFNIREADATSLDAFIRDIQGLSGRITIVGHTDYKGSNEYNDALSLRRAQSVAAY 120
Query: 113 FVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRA 149
+ ++ +G+ P + A A+NRRA
Sbjct: 121 LKQQLDPTFYDWEIKHFGETQPLKLDTSDQARAENRRA 158
Score = 54.8 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FD ++ D+ L + L+ + L+ GH D++G + + L RRA V Y
Sbjct: 190 HFDFDQSELKAEDLTQLDDFIEQLQGLEGSILVAGHTDQVGLLSYNEKLAERRAQTVVEY 249
Query: 113 FVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ ++ +V ++G+ P + +A A NRRA + K
Sbjct: 250 LKTKLDASRLVWEVKAFGELQPVINQTTSEANALNRRAFIVFK 292
>gi|315123150|ref|YP_004065156.1| hypothetical protein PSM_B0207 [Pseudoalteromonas sp. SM9913]
gi|315016910|gb|ADT70247.1| conserved hypothetical protein [Pseudoalteromonas sp. SM9913]
Length = 426
Score = 66.8 bits (161), Expect = 8e-10, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 40/123 (32%), Gaps = 4/123 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD-- 90
++ + + ++ F + P+ +L L LE LI GH D
Sbjct: 300 GIVAVAKNSDGIRITINSENLFKQGDSQLLPSFQPILEKLALSLEGTKGRVLITGHTDDL 359
Query: 91 --ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
S+ L L RA V N + R+ G P D + + NRR
Sbjct: 360 PISTDKYPSNWHLSLARATQVANLMAKSTNLSGRLWPEGKGAAEPIASNSDSASRSLNRR 419
Query: 149 AIV 151
+
Sbjct: 420 IEI 422
>gi|109897724|ref|YP_660979.1| OmpA/MotB [Pseudoalteromonas atlantica T6c]
gi|109700005|gb|ABG39925.1| OmpA/MotB [Pseudoalteromonas atlantica T6c]
Length = 287
Score = 66.8 bits (161), Expect = 9e-10, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYA 108
+ + +S + + L+ +G +L++ L++G++D G R+ + L + RA
Sbjct: 180 ILAYQKNSTELTKYSQRRLNMIGQYLKEDSDMELVLLDGYSDSYGGRDMNKTLSVSRAVE 239
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ NYF G++ R++VT +G+ +E + AKNRR ++
Sbjct: 240 IKNYFSDMGVAPQRIEVTGHGERRHIAPNTNEMSRAKNRRVVI 282
>gi|163756109|ref|ZP_02163225.1| 30S ribosomal protein S1 [Kordia algicida OT-1]
gi|161323983|gb|EDP95316.1| 30S ribosomal protein S1 [Kordia algicida OT-1]
Length = 347
Score = 66.8 bits (161), Expect = 9e-10, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 51/125 (40%), Gaps = 7/125 (5%)
Query: 34 VLNESSLQEQFSSSVGDS------VFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIE 86
E E + + + + FDT I+ +++S + L+ + IE
Sbjct: 220 QTIEKITAEDIINEINSNGFISLHINFDTGKSRIKADSYEIISEITKMLKTNPNLKISIE 279
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
GH D G + ++ L RA +V V GI SR+K +G+ P + AKN
Sbjct: 280 GHTDNAGDESYNMKLSKNRAKSVLMALVDEGIDESRLKSDGFGQTKPIGDNTTDKGKAKN 339
Query: 147 RRAIV 151
RR +
Sbjct: 340 RRVEL 344
>gi|149922653|ref|ZP_01911080.1| flagellar motor protein [Plesiocystis pacifica SIR-1]
gi|149816450|gb|EDM75949.1| flagellar motor protein [Plesiocystis pacifica SIR-1]
Length = 279
Score = 66.8 bits (161), Expect = 9e-10, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 49/127 (38%), Gaps = 5/127 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+ L + + + + FD+ + + +G E D F +EGH D
Sbjct: 131 NGTLKAKIVDGRMVLELRTDILFDSGKAKLSDEGAATVGEVGKLLAELSDRRFQVEGHTD 190
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ S+ L RA V N +A G+ A+ + +Y P+ ++ A+N
Sbjct: 191 NVPIKTKAFPSNWELASARAITVVNEMIAAGMPATNISAAAYADTRPAASNATDEGRAQN 250
Query: 147 RRAIVFL 153
RR + L
Sbjct: 251 RRIEIVL 257
>gi|119944462|ref|YP_942142.1| OmpA/MotB domain-containing protein [Psychromonas ingrahamii 37]
gi|119863066|gb|ABM02543.1| OmpA/MotB domain protein [Psychromonas ingrahamii 37]
Length = 331
Score = 66.8 bits (161), Expect = 9e-10, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 52/133 (39%), Gaps = 3/133 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
+++ + + E + + + F S + P I L + ++ +
Sbjct: 192 APAPITMTAMEPAVAEPQKTIDIEPLIIE-IPFAFDSVKLAPKYIDQLKPIAQQLIKYPE 250
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHD 139
+ ++ GH D G + + L RRA V +Y A +R+K + G+ P
Sbjct: 251 AELIVIGHTDSTGPESYNQQLSERRAALVADYLATHFAIAKNRIKESGRGELAPKASNAT 310
Query: 140 EDAYAKNRRAIVF 152
+D A NRR VF
Sbjct: 311 KDGRALNRRVSVF 323
>gi|291558208|emb|CBL35325.1| Flagellar motor protein [Eubacterium siraeum V10Sc8a]
Length = 339
Score = 66.8 bits (161), Expect = 9e-10, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 45/127 (35%), Gaps = 4/127 (3%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF---LIEGHADELGS 94
+ +++ FD +S ++ QVL+ ++ + + GH + S
Sbjct: 124 EQTPTRIFIRFNNTIMFDGNSAVLKEEGKQVLNKFMPGIKAVNKYIKSCSVSGHTAKAVS 183
Query: 95 RNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA +V Y R + + + V P + A NRR + +
Sbjct: 184 DVNDWDLSAARASSVVKYMDYNRCVDSEKFTVEGKACYTPIADNSTAEGRAANRRVEIMI 243
Query: 154 KGCRANT 160
+ +T
Sbjct: 244 VRAQLDT 250
>gi|253700147|ref|YP_003021336.1| hypothetical protein GM21_1522 [Geobacter sp. M21]
gi|251774997|gb|ACT17578.1| conserved repeat domain protein [Geobacter sp. M21]
Length = 1984
Score = 66.8 bits (161), Expect = 9e-10, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 36/102 (35%), Gaps = 2/102 (1%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFN 111
F + ++L L ++EGH D +GS ++AL RR A +
Sbjct: 1714 AFVFDRSELTLEAKRLLKGAARVLRARPREKVIVEGHTDGIGSVEYNMALSQRRCDAAAD 1773
Query: 112 YFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
Y V A R+ YGK P NRR +
Sbjct: 1774 YLVREEGIARSRLLRRWYGKSRPVADNVTSPGRRMNRRVELK 1815
>gi|188534230|ref|YP_001908027.1| outer membrane protein A [Erwinia tasmaniensis Et1/99]
gi|188029272|emb|CAO97149.1| Outer membrane protein A [Erwinia tasmaniensis Et1/99]
Length = 355
Score = 66.8 bits (161), Expect = 9e-10, Method: Composition-based stats.
Identities = 33/158 (20%), Positives = 63/158 (39%), Gaps = 12/158 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
++ + +S D + + E ++ V F + S++P Q L
Sbjct: 190 SMLSVGVSYRFGQDEAAPVVAPAPAPAPVVETKRFTLKSDVLFTFNKASLKPEGQQALDQ 249
Query: 72 LGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L + L + D ++ G+ D +GS + L +RA +V +Y V++GI +S++
Sbjct: 250 LYTQLSNLDPKDGSVVVLGYTDRIGSEQYNQKLSEKRAQSVVDYLVSKGIPSSKISARGE 309
Query: 129 GKEMPS--VYGHDEDAYAK-------NRRAIVFLKGCR 157
GK P A +RR + +KG +
Sbjct: 310 GKSNPVTGNTCDSVKARKALIDCLGPDRRVEIEVKGIK 347
>gi|268590120|ref|ZP_06124341.1| outer membrane protein P5 [Providencia rettgeri DSM 1131]
gi|291314389|gb|EFE54842.1| outer membrane protein P5 [Providencia rettgeri DSM 1131]
Length = 363
Score = 66.8 bits (161), Expect = 9e-10, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 57/122 (46%), Gaps = 12/122 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + S++P Q L+ L + ++ L+ G D +GS+N ++ L
Sbjct: 233 TLRSDVLFNFNKASLKPEGQQALNELYNELSSIDPTQGRVLVVGFTDRIGSQNYNLPLSQ 292
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
+RA +V +Y V++G+ AS + GKE P + A +RR + ++
Sbjct: 293 KRAQSVVDYLVSKGVPASAIAAEGRGKEDPVTGNKCDNVKGRAALIECLAPDRRVEIEIQ 352
Query: 155 GC 156
G
Sbjct: 353 GT 354
>gi|328470357|gb|EGF41268.1| hypothetical protein VP10329_06152 [Vibrio parahaemolyticus 10329]
Length = 225
Score = 66.8 bits (161), Expect = 9e-10, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 1/111 (0%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALG 102
+ + V F T S + L LG +L + D D +I+GHAD G+ + + L
Sbjct: 111 LMIRLKEQVHFQTGSAQLSSNSQDWLRKLGHYLAGRTDVDVVIDGHADSTGAASFNDTLS 170
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+RA V +A I R+ +G+ +P A NRR + L
Sbjct: 171 EKRAREVEKQMLASSIPRQRVFSRGFGEYVPQCSNATSSGKACNRRVELML 221
>gi|269102192|ref|ZP_06154889.1| sodium-type flagellar protein MotY precursor [Photobacterium
damselae subsp. damselae CIP 102761]
gi|268162090|gb|EEZ40586.1| sodium-type flagellar protein MotY precursor [Photobacterium
damselae subsp. damselae CIP 102761]
Length = 297
Score = 66.8 bits (161), Expect = 9e-10, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLE--KHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
+ +D S + + L + ++ K L+ + D G++N + L RRA
Sbjct: 189 ILHYDNDSEELNELSRKRLMQIADFVRAAKDVDLVLVATYTDSFGTKNENQDLSERRANK 248
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ YF++ G+ R+KV ++G+ + NRR ++ L
Sbjct: 249 LHEYFISLGLPPDRIKVQAFGERREIADNNTPIGRNLNRRVVISL 293
>gi|218886501|ref|YP_002435822.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218757455|gb|ACL08354.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 194
Score = 66.8 bits (161), Expect = 9e-10, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 59/149 (39%), Gaps = 9/149 (6%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDS--------VFFDTSSYSIRPADI 66
++ + T +P V+ + + F S++ ++F T S P
Sbjct: 46 SLAAANESTQVTDRPAPPRVMPQQEIDRVFGSTLAAMPEPPKSFLLYFPTGSTEPEPTSR 105
Query: 67 QVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
L ++ + + GH+D G ++ L + RA AV ARG+ A M +
Sbjct: 106 PALDEAADNIKCRAVSNVSVIGHSDSAGDPAANQKLSMARAEAVRRMLEARGVPAGAMAL 165
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ +G P V A A+NRR + ++
Sbjct: 166 SGHGANDPLVPTAPGVAEARNRRVEILVR 194
>gi|258611826|ref|ZP_05242458.2| chemotaxis protein MotB [Listeria monocytogenes FSL R2-503]
gi|293596186|ref|ZP_05229035.2| chemotaxis protein MotB [Listeria monocytogenes FSL J1-194]
gi|293596895|ref|ZP_05265393.2| chemotaxis protein MotB [Listeria monocytogenes HPB2262]
gi|300764498|ref|ZP_07074491.1| chemotaxis protein MotB [Listeria monocytogenes FSL N1-017]
gi|258606459|gb|EEW19067.1| chemotaxis protein MotB [Listeria monocytogenes FSL R2-503]
gi|293583586|gb|EFF95618.1| chemotaxis protein MotB [Listeria monocytogenes HPB2262]
gi|293593262|gb|EFG01023.1| chemotaxis protein MotB [Listeria monocytogenes FSL J1-194]
gi|300514852|gb|EFK41906.1| chemotaxis protein MotB [Listeria monocytogenes FSL N1-017]
gi|332311111|gb|EGJ24206.1| Chemotaxis protein MotB [Listeria monocytogenes str. Scott A]
Length = 289
Score = 66.8 bits (161), Expect = 9e-10, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 44/137 (32%), Gaps = 8/137 (5%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--LIEGHA 89
+ E ++ D + F + S + ++ +G + ++ GH
Sbjct: 148 GAKMTTKYSDEGLLITIRDDILFQSGSAELTAGKREIAKEIGELFAQGKGTMEGIVSGHT 207
Query: 90 DELGS----RNSSIALGLRRAYAVFNYFV--ARGISASRMKVTSYGKEMPSVYGHDEDAY 143
D + +S+ L + RA + ++ YG+ P
Sbjct: 208 DNVPISTSIYSSNWELSVARAVNFMEAIIQENSEVNPGEFSARGYGEFRPVAKNDIAANR 267
Query: 144 AKNRRAIVFLKGCRANT 160
KNRR + ++ +T
Sbjct: 268 EKNRRVEIMVRPINRDT 284
>gi|83592409|ref|YP_426161.1| hypothetical protein Rru_A1073 [Rhodospirillum rubrum ATCC 11170]
gi|83575323|gb|ABC21874.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170]
Length = 375
Score = 66.8 bits (161), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 12/118 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIEGHAD----ELGSR 95
V F + S ++PA L++L + L ++GH D +
Sbjct: 255 FQSEVLFPSGSSQLQPAGQDTLASLATTLMAIAARIPGDVDWILRVDGHTDRRPINTAAF 314
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA +V N+ + RG+ R+ +G+ P G ++A A+NRR + L
Sbjct: 315 QSNWQLSAARAISVVNFLIERGVPPERLAAAGFGEYQPIDPGQSDEALARNRRIELKL 372
>gi|312795445|ref|YP_004028367.1| outer membrane protein [Burkholderia rhizoxinica HKI 454]
gi|312167220|emb|CBW74223.1| Outer membrane protein [Burkholderia rhizoxinica HKI 454]
Length = 243
Score = 66.8 bits (161), Expect = 9e-10, Method: Composition-based stats.
Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FD ++PA + L +L S ++ + + ++ G+ D++GS + L LR
Sbjct: 97 VTYQADTLFDFDKAVLKPAGKEKLDDLASKIQDLNLEVVVATGYTDKIGSDKYNDHLSLR 156
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY-------AKNRRAIVFLKGCR 157
RA AV Y V++ I A+R+ GK P V ++ A NRR V + G +
Sbjct: 157 RAQAVKAYLVSKDIPANRIYTEGKGKRNPVVTDCNQKNRKALIACLAPNRRVEVEVVGTK 216
Query: 158 A 158
+
Sbjct: 217 S 217
>gi|37679367|ref|NP_933976.1| sodium-type flagellar protein MotY precursor [Vibrio vulnificus
YJ016]
gi|37198110|dbj|BAC93947.1| sodium-type flagellar protein MotY precursor [Vibrio vulnificus
YJ016]
Length = 295
Score = 66.8 bits (161), Expect = 9e-10, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYA 108
+ ++ + + A + LS + ++ + L+ + D + S L RRA +
Sbjct: 186 ILHYERNGDKLTKASQKRLSQIAEYVRYNSDIDLVLVSTYTDSTDGTSVSQNLSERRAES 245
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +YF A G+ R++V YGK P KNRR ++ L
Sbjct: 246 LRDYFKALGLPEDRIQVQGYGKRRPIADNATPIGKDKNRRVVISL 290
>gi|307944516|ref|ZP_07659856.1| OmpA/MotB domain protein [Roseibium sp. TrichSKD4]
gi|307772265|gb|EFO31486.1| OmpA/MotB domain protein [Roseibium sp. TrichSKD4]
Length = 344
Score = 66.8 bits (161), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 44/119 (36%), Gaps = 13/119 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIEGHADELG-----S 94
V F + S I P L L +++ ++GH D
Sbjct: 223 FQSEVLFGSGSEDINPEGQVELKKLADAIKELAVQIPDEINWVLRVDGHTDARPLSGTGR 282
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L RA +V Y V +GI R+ +G+ P G +A AKNRR + L
Sbjct: 283 LRNNWELSAARAISVVRYLVDQGIDPKRLVAAGFGEFQPLEEGDTPEALAKNRRIELKL 341
>gi|258593789|emb|CBE70130.1| Outer membrane lipoprotein omp16 precursor
(peptidoglycan-associated lipoprotein) (modular protein)
[NC10 bacterium 'Dutch sediment']
Length = 184
Score = 66.8 bits (161), Expect = 9e-10, Method: Composition-based stats.
Identities = 41/133 (30%), Positives = 59/133 (44%), Gaps = 1/133 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
+ + + S +FFD +IR L+ W
Sbjct: 49 QSKSIQERPVAGAPSAQQPATAGKESPLKDIFFDFDKSTIRDDAKSSLNEDLQWLNANPT 108
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+IEGH DE G+ ++ LG RRA A +Y +A GI+A R++ S+GKE P GHDE
Sbjct: 109 AQIVIEGHCDERGTAEYNLGLGERRAKAAKDYVMAAGINAKRIRTVSFGKERPFATGHDE 168
Query: 141 DAYAKNRRAIVFL 153
A+ NRRA +
Sbjct: 169 SAWKWNRRAHFVV 181
>gi|157960967|ref|YP_001501001.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC
700345]
gi|157845967|gb|ABV86466.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345]
Length = 198
Score = 66.8 bits (161), Expect = 9e-10, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
V F + I P+ Q + + WL+ + GH D +G + ++ L L+RA V
Sbjct: 93 VKFGFAQADILPSQEQTIEVIARWLKSTRVSIQLVGHTDSIGDASFNLQLSLKRAEQVKK 152
Query: 112 YFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
FV + A R ++ G +P +NRR +
Sbjct: 153 VFVEQFGFAADRFQINGVGSSLPVANNQTAFGREQNRRVEFLV 195
>gi|241767706|ref|ZP_04765331.1| OmpA/MotB domain protein [Acidovorax delafieldii 2AN]
gi|241361321|gb|EER57865.1| OmpA/MotB domain protein [Acidovorax delafieldii 2AN]
Length = 219
Score = 66.8 bits (161), Expect = 9e-10, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 47/116 (40%), Gaps = 11/116 (9%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC----DFLIEGHADE-------LGS 94
+ SV F T S +RP Q+L +L L+ + ++ G D
Sbjct: 88 IGISGSVLFATGSDELRPEGRQLLKSLVPPLQVYLRERDEMLMVSGFTDNTTLLRGPHQR 147
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
++ L +RA V + G+ +S++ ++G E P DE A+NRR
Sbjct: 148 FADNLELSAQRALTVARALIDEGMPSSQVFAAAFGAEQPVADNADEKGRAQNRRVE 203
>gi|254475344|ref|ZP_05088730.1| OmpA/MotB [Ruegeria sp. R11]
gi|214029587|gb|EEB70422.1| OmpA/MotB [Ruegeria sp. R11]
Length = 208
Score = 66.8 bits (161), Expect = 9e-10, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 61/141 (43%), Gaps = 4/141 (2%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
++ G L +F+ V ++ F S + +L W+
Sbjct: 28 AVFGNATTSNAAVMAGERDFAIQLATRFAEDVPTTINFAFDSAQLDAEARAILDQQAHWI 87
Query: 77 EKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT-SYGKEMPS 134
+ F + GH D +GS + + LGLRRA A +Y V+RGIS SR++ S+G+ P
Sbjct: 88 RQFPEVRFRVYGHTDAVGSNSYNKTLGLRRARAAVSYLVSRGISRSRLQAVVSFGETQPL 147
Query: 135 VYGHDEDAYAKNRRAIVFLKG 155
+ D + NRR + + G
Sbjct: 148 IPTSDRERR--NRRTVTEVSG 166
>gi|170717767|ref|YP_001784833.1| OmpA domain-containing protein [Haemophilus somnus 2336]
gi|168825896|gb|ACA31267.1| OmpA domain protein transmembrane region-containing protein
[Haemophilus somnus 2336]
Length = 342
Score = 66.8 bits (161), Expect = 9e-10, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 10/123 (8%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGL 103
S+ V F + +++P Q L + + + + G+ D +GS S++ L
Sbjct: 220 VFSLNSDVNFAFAKDTLKPEAQQTLDGVYGEIAQLKTAQVSVAGYTDRIGSDASNLKLSQ 279
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLK 154
RRA V NY V++G++ + YG+ P + A++RR + +K
Sbjct: 280 RRADTVANYLVSKGVAQDAISAVGYGEANPVTGMKCDSVKGRKALIACLAEDRRVEISVK 339
Query: 155 GCR 157
G +
Sbjct: 340 GSK 342
>gi|115360213|ref|YP_777351.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD]
gi|115285501|gb|ABI91017.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
Length = 228
Score = 66.8 bits (161), Expect = 9e-10, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 5/116 (4%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGS----RNS 97
+ + F+ + P VLS + L +H D L+EGH D S
Sbjct: 111 GIEIGIDAKILFNVGDARLLPDATPVLSEIARALSEHATGDILVEGHTDSAPIANAKYES 170
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA +V Y RG++ R+ P V G D A A+NRR +F+
Sbjct: 171 NWELSSARAGSVVRYLAERGVAPHRLAAIGRADTQPLVAGDDAPARARNRRVTIFV 226
>gi|8928233|sp|Q9S3P9|MOTY_VIBAN RecName: Full=Sodium-type flagellar protein motY; AltName:
Full=Polar flagellum motor protein; Flags: Precursor
gi|5802659|gb|AAD51752.1|AF176946_1 polar flagellum motor protein [Listonella anguillarum]
Length = 293
Score = 66.8 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYA 108
+ +D + + A + L+ + ++ + L+ + D + SR S L RRA
Sbjct: 184 ILHYDRDNVQLNKASQKRLAQIADYIRYNQDIDLVLVSTYTDSVDSRGVSQDLSERRAEV 243
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +YF + G+ R++V YGK P KNRR ++ L
Sbjct: 244 LRDYFKSLGLPEDRIQVQGYGKRRPIADNASPIGKDKNRRVVISL 288
>gi|89055525|ref|YP_510976.1| OmpA/MotB [Jannaschia sp. CCS1]
gi|88865074|gb|ABD55951.1| OmpA/MotB [Jannaschia sp. CCS1]
Length = 487
Score = 66.8 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 42/117 (35%), Gaps = 5/117 (4%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNS 97
+ V ++ F + S I I V +G L D + GH D + +
Sbjct: 344 DAVLVRVANAGAFGSGSAEIEDDFIDVFDRIGQALAAEDFAVTVLGHTDNVAIRTAPFPN 403
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ L RA AV + + + + R+ + G + P NRR + ++
Sbjct: 404 NYFLSRARANAVRDVLL-QYVDPVRVDIEGQGPDRPIASNITPAGQEANRRTEILVR 459
>gi|91791747|ref|YP_561398.1| OmpA/MotB [Shewanella denitrificans OS217]
gi|91713749|gb|ABE53675.1| OmpA/MotB [Shewanella denitrificans OS217]
Length = 201
Score = 66.8 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 2/108 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAV 109
+ F T+SY + P + + + ++++ + IEGH + GS ++AL RA AV
Sbjct: 76 KILFPTNSYVLDPQYYGQIELIANMMKQYPNTNVTIEGHCSKKGSYELNMALSHNRANAV 135
Query: 110 FNYFVARGIS-ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
++ SR+ Y + P E+A+ +NRR I + G
Sbjct: 136 TQVLTSQFGIAPSRLNAIGYSFDRPVDMSDTEEAHRRNRRVIAEISGE 183
>gi|255261508|ref|ZP_05340850.1| OmpA family domain protein [Thalassiobium sp. R2A62]
gi|255103843|gb|EET46517.1| OmpA family domain protein [Thalassiobium sp. R2A62]
Length = 308
Score = 66.8 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/145 (21%), Positives = 50/145 (34%), Gaps = 2/145 (1%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS 70
SA+ S + + + + + E V + F S ++ A L
Sbjct: 160 SAVAQSSAPAVRATVARTDAAAVPDDFGAALETDGRVVLSDLAFQVGSSNLGDAAFASLD 219
Query: 71 NLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASR-MKVTSY 128
L +L + + GH D G N +IAL RRA +V + R M+
Sbjct: 220 LLAEYLSANPNKTIALVGHTDSSGPLNGNIALSKRRASSVLDRLTRDYGIPRRQMEAEGM 279
Query: 129 GKEMPSVYGHDEDAYAKNRRAIVFL 153
G P ++ NRR V +
Sbjct: 280 GYLSPLSTNLTQEGRDLNRRVEVIV 304
>gi|91785192|ref|YP_560398.1| OmpA family outer membrane protein [Burkholderia xenovorans LB400]
gi|91689146|gb|ABE32346.1| outer membrane protein, OmpA family [Burkholderia xenovorans LB400]
Length = 267
Score = 66.8 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 42/117 (35%), Gaps = 1/117 (0%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRN 96
+ Q + + F T S + P + L + + + ++ G+ D GS
Sbjct: 148 KQVAPQVRLLLQGNANFATDSAVLSPIAKKNLDDFMRANQGVNLHRVMVVGYTDATGSEA 207
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L RA AV Y G+ A + G P + +NRR V +
Sbjct: 208 HNLNLSQARAAAVVQYLRDGGLRAEQFVARGLGSADPVASNATAEGRMQNRRVDVRV 264
>gi|167750717|ref|ZP_02422844.1| hypothetical protein EUBSIR_01695 [Eubacterium siraeum DSM 15702]
gi|167656396|gb|EDS00526.1| hypothetical protein EUBSIR_01695 [Eubacterium siraeum DSM 15702]
Length = 339
Score = 66.8 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 45/127 (35%), Gaps = 4/127 (3%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF---LIEGHADELGS 94
+ +++ FD +S ++ QVL+ ++ + + GH + S
Sbjct: 124 EQTPTRIFIRFNNTIMFDGNSAVLKEEGKQVLNKFMPGIKAVNKYIKSCSVSGHTAKAVS 183
Query: 95 RNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA +V Y R + + + V P + A NRR + +
Sbjct: 184 DVNDWDLSAARASSVVKYMDYNRCVDSEKFTVEGKACYTPIADNSTAEGRAANRRVEIMI 243
Query: 154 KGCRANT 160
+ +T
Sbjct: 244 VRAQLDT 250
>gi|91776742|ref|YP_546498.1| OmpA/MotB [Methylobacillus flagellatus KT]
gi|91710729|gb|ABE50657.1| OmpA/MotB [Methylobacillus flagellatus KT]
Length = 1402
Score = 66.8 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 46/134 (34%), Gaps = 9/134 (6%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEG 87
++ V + F++ + + + L L + L+ K + I G
Sbjct: 91 AAAANVPQAEPQVLTRLVENSGAAQFESGKADLTDSSVAALEQLAAQLQGKKNVRIDIAG 150
Query: 88 HADELG-------SRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHD 139
H D + L R+ AV + + ++ ++ YG+ P
Sbjct: 151 HTDNQRLSPNARKIFRDNQGLSEARSLAVAAFLKQKLGLEDSQLSISGYGESQPVTSNDT 210
Query: 140 EDAYAKNRRAIVFL 153
+ A+NRR I+ +
Sbjct: 211 PEGMAQNRRVIIRV 224
>gi|46906937|ref|YP_013326.1| chemotaxis protein MotB [Listeria monocytogenes serotype 4b str.
F2365]
gi|226223317|ref|YP_002757424.1| motility protein (flagellar motor rotation) MotB [Listeria
monocytogenes Clip81459]
gi|254993370|ref|ZP_05275560.1| motility protein (flagellar motor rotation) MotB [Listeria
monocytogenes FSL J2-064]
gi|255522318|ref|ZP_05389555.1| motility protein (flagellar motor rotation) MotB [Listeria
monocytogenes FSL J1-175]
gi|46880203|gb|AAT03503.1| chemotaxis protein MotB [Listeria monocytogenes serotype 4b str.
F2365]
gi|225875779|emb|CAS04482.1| Putative motility protein (flagellar motor rotation) MotB [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|328467255|gb|EGF38335.1| chemotaxis protein MotB [Listeria monocytogenes 1816]
gi|328475649|gb|EGF46398.1| chemotaxis protein MotB [Listeria monocytogenes 220]
Length = 275
Score = 66.8 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 44/137 (32%), Gaps = 8/137 (5%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--LIEGHA 89
+ E ++ D + F + S + ++ +G + ++ GH
Sbjct: 134 GAKMTTKYSDEGLLITIRDDILFQSGSAELTAGKREIAKEIGELFAQGKGTMEGIVSGHT 193
Query: 90 DELGS----RNSSIALGLRRAYAVFNYFV--ARGISASRMKVTSYGKEMPSVYGHDEDAY 143
D + +S+ L + RA + ++ YG+ P
Sbjct: 194 DNVPISTSIYSSNWELSVARAVNFMEAIIQENSEVNPGEFSARGYGEFRPVAKNDIAANR 253
Query: 144 AKNRRAIVFLKGCRANT 160
KNRR + ++ +T
Sbjct: 254 EKNRRVEIMVRPINRDT 270
>gi|261822111|ref|YP_003260217.1| outer membrane protein A [Pectobacterium wasabiae WPP163]
gi|261606124|gb|ACX88610.1| OmpA domain protein transmembrane region-containing protein
[Pectobacterium wasabiae WPP163]
Length = 361
Score = 66.8 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/161 (21%), Positives = 69/161 (42%), Gaps = 12/161 (7%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
+L ++ + G D+ + +P + + E ++ V F+ + +++ Q
Sbjct: 193 LLMSVGLSYRFGQDDRVAPVVAPAPTPAPAPVVETKRFTLKSDVLFNFNKATLKAEGQQS 252
Query: 69 LSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
L L + L + D ++ G D LGS + AL +RA +V +Y V++GI A+++
Sbjct: 253 LDQLYTQLSSLDPKDGSVVVLGFTDRLGSEQYNQALSEKRAQSVVDYLVSKGIPANKVSA 312
Query: 126 TSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLKGCR 157
GK P + A +RR + +KG +
Sbjct: 313 RGLGKSQPVTGSTCDNVKPRAALIDCLAPDRRVEIEVKGIK 353
>gi|270285686|ref|ZP_06195080.1| peptidoglycan associated lipoprotein, putative [Chlamydia muridarum
Nigg]
gi|270289694|ref|ZP_06195996.1| peptidoglycan associated lipoprotein, putative [Chlamydia muridarum
Weiss]
gi|301337081|ref|ZP_07225283.1| peptidoglycan-associated lipoprotein [Chlamydia muridarum
MopnTet14]
Length = 188
Score = 66.8 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/106 (37%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Query: 50 DSVFFDTSSYSIRPADIQVL--SNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++ F T SYSI+ D + S + + IEGH DE G+ ++ALG RRA
Sbjct: 80 RNITFATDSYSIKGEDNLTILASLVRHLRKSPKTTLYIEGHTDERGAAAYNLALGARRAN 139
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV Y + +GI++ R+ SYGKE P GH+E A+ +NRR +
Sbjct: 140 AVKQYLIKQGIASDRLFTISYGKEHPVHSGHNELAWQQNRRTEFKI 185
>gi|118591925|ref|ZP_01549320.1| possible outer membrane protein OprF [Stappia aggregata IAM 12614]
gi|118435568|gb|EAV42214.1| possible outer membrane protein OprF [Stappia aggregata IAM 12614]
Length = 194
Score = 66.8 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 44/125 (35%), Gaps = 6/125 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADI---QVLSNLGSWLEKHDCDFLIEGH 88
+ E + +V F+ S S+ I Q L + F I GH
Sbjct: 66 GISIEGQLPPEVVLPRINLTVNFEFDSASLTNDGILTLQALGQALQDPRLKNMRFQIAGH 125
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNR 147
D G+ + ++ L RRA+ V + A ++ YG+ P G+ NR
Sbjct: 126 TDLRGTADYNLDLSKRRAFMVAEFLAAFYTIPRGQLVPVGYGESRPVDPGNPSSGR--NR 183
Query: 148 RAIVF 152
R +
Sbjct: 184 RVEII 188
>gi|307300434|ref|ZP_07580214.1| OmpA/MotB domain protein [Sinorhizobium meliloti BL225C]
gi|307318299|ref|ZP_07597734.1| OmpA/MotB domain protein [Sinorhizobium meliloti AK83]
gi|306895981|gb|EFN26732.1| OmpA/MotB domain protein [Sinorhizobium meliloti AK83]
gi|306904600|gb|EFN35184.1| OmpA/MotB domain protein [Sinorhizobium meliloti BL225C]
Length = 342
Score = 66.8 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 42/102 (41%), Gaps = 5/102 (4%)
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG-----SRNSSIALGLRRAYAVFN 111
+ +L + + ++GH D++ + L RA +V
Sbjct: 238 GQTEMAKLATALLDLAKEIPAEINWVLRVDGHTDDVQLSGIGRFRDNWELSSARATSVVK 297
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +++G+ A R+ +G+ P G ++A A+NRR + L
Sbjct: 298 FLISKGVPADRLVAAGFGEYQPIAPGESQEARAQNRRIELKL 339
>gi|146302267|ref|YP_001196858.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
UW101]
gi|146156685|gb|ABQ07539.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
Length = 643
Score = 66.8 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 54/145 (37%), Gaps = 7/145 (4%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDS-VFFDTSSYSIRPADIQVLSNLGS 74
++I+ + + D + + ++ + G ++FD +IR L +
Sbjct: 496 ITIAKTNGKTNLPIALDKSVCKVAVGDDLGKCFGIKMIYFDLDKSNIRTEAALDLEKILD 555
Query: 75 W-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
+ I H D S + AL RRA + ++ + G++ +R+ YG+
Sbjct: 556 VLNQNPTMKLDIRSHTDSRASHQYNEALSDRRAKSTISWLIQNGVAKNRLTGKGYGETQL 615
Query: 134 SVYGH-----DEDAYAKNRRAIVFL 153
E+ + NRR+ +
Sbjct: 616 VNQCSDGVNCTEEEHQMNRRSEFII 640
>gi|218676336|ref|YP_002395155.1| putative protein F-related protein [Vibrio splendidus LGP32]
gi|218324604|emb|CAV26143.1| putative protein F-related protein [Vibrio splendidus LGP32]
Length = 203
Score = 66.8 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 1/111 (0%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALG 102
+ V F T S S PA L LGS+ + D D +IEGH D GS + L
Sbjct: 89 VMVKLVQHVNFKTGSTSPEPAYNNWLDTLGSYLSRRQDIDVVIEGHTDNTGSDRVNDPLS 148
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+RA V + +S+ + +G+ +P+ A NRR + L
Sbjct: 149 EQRAKEVKARLESNYVSSRAIYTRGFGEYVPACNNASVQGKACNRRVELML 199
>gi|225872180|ref|YP_002753635.1| OmpA family protein [Acidobacterium capsulatum ATCC 51196]
gi|225792320|gb|ACO32410.1| OmpA family protein [Acidobacterium capsulatum ATCC 51196]
Length = 245
Score = 66.8 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 1/145 (0%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVL 69
L A + T + ES++ E + VF++ SYS+RP ++
Sbjct: 99 LVATGQGGSTDATVQVTVTQPQAATVAESNIDEATFEANVKPVFYNFDSYSVRPDAQAII 158
Query: 70 SNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
++ ++ + +I G+ D+ GS ++ALG RA A V+ G+S R++ SY
Sbjct: 159 QQDANYLIQHPNLHVVIGGYCDDRGSVEYNLALGENRANAAKQALVSAGVSPDRLRTVSY 218
Query: 129 GKEMPSVYGHDEDAYAKNRRAIVFL 153
GKE +E + NRRA L
Sbjct: 219 GKEKQFCTEQNESCWQSNRRAQFTL 243
>gi|167950042|ref|ZP_02537116.1| flagellar motor protein MotB [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 151
Score = 66.8 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 43/128 (33%), Gaps = 5/128 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ +L + + + + F + ++ P V+S + + ++ GH D+
Sbjct: 8 EGMLEVETEATKIIIRIQEKGSFGSGRATLNPGFFDVISKITKVIASTPGKVVVAGHTDD 67
Query: 92 LGSRNSSIAL-----GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ R V G+ SR+ V + P V AKN
Sbjct: 68 IPISTKRFRSNWELSSDRAVTVVHAMLSNHGLDPSRVSVEGHADSSPLVPNDSWANRAKN 127
Query: 147 RRAIVFLK 154
RR + ++
Sbjct: 128 RRVELIIE 135
>gi|146300030|ref|YP_001194621.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
UW101]
gi|146154448|gb|ABQ05302.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
Length = 712
Score = 66.8 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 6/111 (5%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADELGSRNSSIALGLRRAYA 108
D ++FD + + IR VL + ++K+ + I H D G+ + L +RA +
Sbjct: 600 DPIYFDYNLWYIRKESKVVLGRVVELMKKYPGMVIEIGSHTDSRGNEKFNADLSQKRANS 659
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHD-----EDAYAKNRRAIVFLK 154
+ + GI A R+ YG+ +P + E+ + NRR+ +K
Sbjct: 660 TREFIIQSGIEAKRISAKGYGESVPIIKCKTDDACSEEEHELNRRSEFVIK 710
>gi|56476929|ref|YP_158518.1| outer membrane protein, porin-associated lipoprotein [Aromatoleum
aromaticum EbN1]
gi|56312972|emb|CAI07617.1| Outer membrane protein, porin-associated lipoprotein [Aromatoleum
aromaticum EbN1]
Length = 175
Score = 66.8 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 18/166 (10%)
Query: 1 MQYS----TIFIILSAITMMS----ISGIDNLDTKISSPDTVLNESSLQEQFSSSV---- 48
M+ + +L+A + G D +P + +
Sbjct: 1 MKKFVLPALLVTLLAACSSTGTFDQAGGTAVEDRSTGAPGVATVTAPSMAGSGIAALTDP 60
Query: 49 -----GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALG 102
SVFFD + I+P ++ + ++ LI+G+ DELGSR ++ALG
Sbjct: 61 NNILSKRSVFFDFDQFVIKPEARPLVEAHARFLVQNPQMKMLIQGNTDELGSREYNLALG 120
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
+RA AV G S+++ S G+E P E +A+NRR
Sbjct: 121 QKRADAVRQALTLLGAKESQIESVSLGEEKPRCGESSESCFAQNRR 166
>gi|332529393|ref|ZP_08405354.1| ompa/motb domain-containing protein [Hylemonella gracilis ATCC
19624]
gi|332041191|gb|EGI77556.1| ompa/motb domain-containing protein [Hylemonella gracilis ATCC
19624]
Length = 203
Score = 66.8 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 64/183 (34%), Gaps = 31/183 (16%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD----------- 50
++S + +++A +++ + ++
Sbjct: 17 RFSQVLAVMTAAIVLAGCAASVQAPAPQAETAPATTGQAPAAAPAATPAPAAAAPKPEAK 76
Query: 51 -------------------SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE-GHAD 90
+VFFD ++P I L L + + + I GH D
Sbjct: 77 PQPDVVLTSPLGVKQVETVTVFFDFDKSELKPEAIASLDTLAAKAKGRTVEATIVVGHTD 136
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
+G+ ++ L +RRA AV + A+GI+++ + G P+ + A NRRA
Sbjct: 137 SIGTPEYNLKLSVRRAEAVKAHLTAQGINSASVFTEGKGLTAPARPNDTAEGRAVNRRAD 196
Query: 151 VFL 153
+ L
Sbjct: 197 IEL 199
>gi|146997|gb|AAA24239.1| outer membrane protein II [Escherichia blattae]
Length = 241
Score = 66.8 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 60/156 (38%), Gaps = 12/156 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + +S D + + ++ V F+ + +++P Q L
Sbjct: 85 GMLSVGVSYRFGQDEAAPVVAPAPAPAPQVQTKHFTLKSDVLFNFNKSTLKPEGQQALDQ 144
Query: 72 LGSWLEKHDCD---FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L + L D ++ G+ D +GS + L +RA +V +Y V++GI A ++
Sbjct: 145 LYTQLSNLDPKDGAVVVLGYTDRIGSDAYNQRLSQQRAQSVVDYLVSKGIPAGKITAQGQ 204
Query: 129 GKEMPS--VYGHDEDAYAK-------NRRAIVFLKG 155
G+ P + A +RR + +KG
Sbjct: 205 GESNPVTGSTCDNVKQRAALIDCLAPDRRVEIEVKG 240
>gi|262376326|ref|ZP_06069556.1| predicted protein [Acinetobacter lwoffii SH145]
gi|262308927|gb|EEY90060.1| predicted protein [Acinetobacter lwoffii SH145]
Length = 492
Score = 66.8 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 55/142 (38%), Gaps = 6/142 (4%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVG-----DSVFFDTSSYSIRPADIQVLSNLGSW 75
D ++T S + L + V + FDT+S + + VL +
Sbjct: 332 SDVINTANSEAEQALASIKTDNVKALDVATALNLQIINFDTASTEVPEVNKLVLDQAAAL 391
Query: 76 -LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
+ GHAD GS + L ++RA A+ +Y V +G++ ++++ G++ P
Sbjct: 392 LQRAPHVILKVTGHADAQGSEAENKVLSVQRAQAITSYLVGKGVNPAQLQAVGMGEDQPV 451
Query: 135 VYGHDEDAYAKNRRAIVFLKGC 156
+NRR +
Sbjct: 452 EPNATPAGQFQNRRVTFEVVNT 473
>gi|47091738|ref|ZP_00229534.1| chemotaxis protein MotB [Listeria monocytogenes str. 4b H7858]
gi|47020057|gb|EAL10794.1| chemotaxis protein MotB [Listeria monocytogenes str. 4b H7858]
Length = 293
Score = 66.8 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 44/137 (32%), Gaps = 8/137 (5%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--LIEGHA 89
+ E ++ D + F + S + ++ +G + ++ GH
Sbjct: 152 GAKMTTKYSDEGLLITIRDDILFQSGSAELTAGKREIAKEIGELFAQGKGTMEGIVSGHT 211
Query: 90 DELGS----RNSSIALGLRRAYAVFNYFV--ARGISASRMKVTSYGKEMPSVYGHDEDAY 143
D + +S+ L + RA + ++ YG+ P
Sbjct: 212 DNVPISTSIYSSNWELSVARAVNFMEAIIQENSEVNPGEFSARGYGEFRPVAKNDIAANR 271
Query: 144 AKNRRAIVFLKGCRANT 160
KNRR + ++ +T
Sbjct: 272 EKNRRVEIMVRPINRDT 288
>gi|302338088|ref|YP_003803294.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293]
gi|301635273|gb|ADK80700.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293]
Length = 242
Score = 66.8 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 46/124 (37%), Gaps = 7/124 (5%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIR-PADIQVLSNL-GSWLEKHDCDFLIEGHADELGS 94
+ ++ FF +S ++ + L L F IEGH D +
Sbjct: 113 VQQDERGLIITLASDAFFKPASAEVQIEESRETLQKLSALLRSMPGRKFRIEGHTDSTPT 172
Query: 95 -----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
++ L RA V +Y V G++ ++ +V + +P E+ A NRR
Sbjct: 173 DPTGPWPTNWELSTDRATNVLHYLVDFGVTENQFQVAGFADTVPLASESTEEGKAYNRRV 232
Query: 150 IVFL 153
+ +
Sbjct: 233 DIII 236
>gi|257095366|ref|YP_003169007.1| flagellar motor protein MotD [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257047890|gb|ACV37078.1| OmpA/MotB domain protein [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 276
Score = 66.8 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 45/119 (37%), Gaps = 4/119 (3%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS---- 94
+ + DS+ F ++P I+ + ++ L D IEGH D +
Sbjct: 122 ETSRGVTIEINDSILFSPGQAVLQPQLIKAMQSVAEVLVAADFPITIEGHTDNVPIKNTQ 181
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA V F GI+A R+ Y P D A+NRR + +
Sbjct: 182 FPSNWELSAVRATTVLRLFADAGIAAGRLTAIGYADTRPVEPNLLADGRARNRRVSILI 240
>gi|189500991|ref|YP_001960461.1| OmpA/MotB domain-containing protein [Chlorobium phaeobacteroides
BS1]
gi|189496432|gb|ACE04980.1| OmpA/MotB domain protein [Chlorobium phaeobacteroides BS1]
Length = 350
Score = 66.8 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 59/139 (42%), Gaps = 6/139 (4%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDS----VFFDTSSYSIRPADIQVLSNLGSW 75
+D ++ + + V+ ++ ++ +S G +FFD+ I+PA V++ +
Sbjct: 210 AVDIIEEQAMKKNMVVVKADAMKKAIASSGRIALYGIFFDSGKAVIKPASKPVIAEIAKL 269
Query: 76 LEKHDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMP 133
L++ L + GH D G ++ L +RA AV + + +SR+ G P
Sbjct: 270 LKQDPSLVLHVVGHTDNAGGYTFNMGLSRKRALAVVSALARQHNIASSRLIANGVGYLAP 329
Query: 134 SVYGHDEDAYAKNRRAIVF 152
AKNRR +
Sbjct: 330 VATNTSAAGRAKNRRVELV 348
>gi|83309701|ref|YP_419965.1| Outer membrane protein and related peptidoglycan-associated protein
[Magnetospirillum magneticum AMB-1]
gi|82944542|dbj|BAE49406.1| Outer membrane protein and related peptidoglycan-associated protein
[Magnetospirillum magneticum AMB-1]
Length = 378
Score = 66.8 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 41/110 (37%), Gaps = 1/110 (0%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGL 103
VFFD I P +VL + + H D GS + AL
Sbjct: 268 QVQKNYIVFFDFDKAQITPEAARVLQQAAGAAKTAGAARIDLSAHTDLSGSAKYNQALSE 327
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+R AV GI AS++ V + GK P V D +NRR + L
Sbjct: 328 KRGAAVKAQLEQLGIPASQIVVVAKGKTSPMVPTPDGVREPQNRRVEIIL 377
>gi|153832075|ref|ZP_01984742.1| flagellar motor protein [Vibrio harveyi HY01]
gi|148871690|gb|EDL70531.1| flagellar motor protein [Vibrio harveyi HY01]
Length = 430
Score = 66.8 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 47/121 (38%), Gaps = 4/121 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+ +L ++ S+ F++ S + V+S L LE + L+ GH D+
Sbjct: 304 VTVDALPDRVRISIKAQDLFESGSAEVVEYIQPVISKLARTLEATEGKILVAGHTDDKPI 363
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
S+ L L RA A+ +A R+ G P V ++ A NRR
Sbjct: 364 FTSKYPSNWHLSLARATAMSEQLIANSALEGRVLPEGLGDARPLVENTSDENRALNRRIE 423
Query: 151 V 151
+
Sbjct: 424 I 424
>gi|332290760|ref|YP_004429369.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332168846|gb|AEE18101.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 648
Score = 66.8 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 61/146 (41%), Gaps = 7/146 (4%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG-DSVFFDTSSYSIRPADIQVLSNLG 73
M++ + + +I D L + + + + ++F+ Y IRP L+ +
Sbjct: 500 MVTTPNVSSEIEEILQLDKTLKPVVPGDDIAKILDLNPIYFNFDKYDIRPDAEVELAKVL 559
Query: 74 SWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
++E + + H D G ++ L R + ++ +++GISASR+ YG+
Sbjct: 560 VYMETYPSVRIDVRSHTDSRGRDAYNLNLSQNRNVSTRDWLISKGISASRLTGKGYGETQ 619
Query: 133 PSVYGHD-----EDAYAKNRRAIVFL 153
+ +D + NRR+ +
Sbjct: 620 LVNDCGNGVRCSKDQHQLNRRSEFIV 645
>gi|116872075|ref|YP_848856.1| chemotaxis (flagellar motor rotation) protein MotB [Listeria
welshimeri serovar 6b str. SLCC5334]
gi|116740953|emb|CAK20073.1| chemotaxis (flagellar motor rotation) protein MotB [Listeria
welshimeri serovar 6b str. SLCC5334]
Length = 275
Score = 66.8 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 44/137 (32%), Gaps = 8/137 (5%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--LIEGHA 89
+ E ++ D + F + S + ++ +G + ++ GH
Sbjct: 134 GAKMTTKYSDEGLLITIRDDILFQSGSAELTAGKREIAKEIGELFAQGKGTMEGIVSGHT 193
Query: 90 DELGS----RNSSIALGLRRAYAVFNYFV--ARGISASRMKVTSYGKEMPSVYGHDEDAY 143
D + +S+ L + RA + ++ YG+ P
Sbjct: 194 DNVPISTSIYSSNWELSVARAVNFMEAIIQENSEVNPGEFSARGYGEFRPVAKNDIAANR 253
Query: 144 AKNRRAIVFLKGCRANT 160
KNRR + ++ +T
Sbjct: 254 EKNRRVEIMVRPINRDT 270
>gi|240145494|ref|ZP_04744095.1| putative chemotaxis protein MotB [Roseburia intestinalis L1-82]
gi|257202309|gb|EEV00594.1| putative chemotaxis protein MotB [Roseburia intestinalis L1-82]
Length = 267
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 53/119 (44%), Gaps = 6/119 (5%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADELGSRNSSI 99
+ ++ ++ FD+ IR ++ LG +E + + + +EGH D + ++
Sbjct: 140 AQYVMLNMNGALLFDSGHAEIRSEAYPLIDKLGKLIEPYQDNIIEVEGHTDNVPIHSAKY 199
Query: 100 A----LGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA AV +Y + + +K + G+ +P ++ ++NRR I+ +
Sbjct: 200 EDNDVLSFYRARAVTDYLRDITTVEPAHLKASGRGEYVPVADNTTQEGRSRNRRVIIKI 258
>gi|27366370|ref|NP_761898.1| sodium-type flagellar protein motY [Vibrio vulnificus CMCP6]
gi|27362571|gb|AAO11425.1| Sodium-type flagellar protein motY precursor [Vibrio vulnificus
CMCP6]
Length = 293
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYA 108
+ ++ + + A + LS + ++ + L+ + D + S L RRA +
Sbjct: 184 ILHYERNGDKLTKASQKRLSQIAEYVRYNSDIDLVLVSTYTDSTDGTSVSQNLSERRAES 243
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +YF A G++ R++V YGK P KNRR ++ L
Sbjct: 244 LRDYFKALGLTEDRIQVQGYGKRRPIADNATPIGKDKNRRVVISL 288
>gi|46200841|ref|ZP_00207866.1| COG2885: Outer membrane protein and related
peptidoglycan-associated (lipo)proteins
[Magnetospirillum magnetotacticum MS-1]
Length = 342
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 41/104 (39%), Gaps = 1/104 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAV 109
VFFD I P +VL + + H D GS + AL +R AV
Sbjct: 238 IVFFDFDKAQITPEAARVLQQAAGAAKTAGAARIDLSAHTDLSGSAKYNQALSEKRGAAV 297
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
GI AS++ V + GK P V D +NRR + L
Sbjct: 298 KAQLEQLGIPASQIVVVAKGKSSPMVPTPDGVREPQNRRVEIVL 341
>gi|15835503|ref|NP_297262.1| peptidoglycan associated lipoprotein, putative [Chlamydia muridarum
Nigg]
gi|7190917|gb|AAF39684.1| peptidoglycan associated lipoprotein, putative [Chlamydia muridarum
Nigg]
Length = 202
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/106 (37%), Positives = 58/106 (54%), Gaps = 2/106 (1%)
Query: 50 DSVFFDTSSYSIRPADIQVL--SNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++ F T SYSI+ D + S + + IEGH DE G+ ++ALG RRA
Sbjct: 94 RNITFATDSYSIKGEDNLTILASLVRHLRKSPKTTLYIEGHTDERGAAAYNLALGARRAN 153
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV Y + +GI++ R+ SYGKE P GH+E A+ +NRR +
Sbjct: 154 AVKQYLIKQGIASDRLFTISYGKEHPVHSGHNELAWQQNRRTEFKI 199
>gi|51595793|ref|YP_069984.1| outer membrane protein A [Yersinia pseudotuberculosis IP 32953]
gi|108806724|ref|YP_650640.1| outer membrane protein A [Yersinia pestis Antiqua]
gi|108812705|ref|YP_648472.1| outer membrane protein A [Yersinia pestis Nepal516]
gi|145598823|ref|YP_001162899.1| outer membrane protein A [Yersinia pestis Pestoides F]
gi|149366590|ref|ZP_01888624.1| putative outer membrane porin A protein [Yersinia pestis CA88-4125]
gi|162418551|ref|YP_001607555.1| outer membrane protein A [Yersinia pestis Angola]
gi|165924613|ref|ZP_02220445.1| outer membrane protein A [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165940134|ref|ZP_02228667.1| outer membrane protein A [Yersinia pestis biovar Orientalis str.
IP275]
gi|166011945|ref|ZP_02232843.1| outer membrane protein A [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166211728|ref|ZP_02237763.1| outer membrane protein A [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167402334|ref|ZP_02307802.1| outer membrane protein A [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167419876|ref|ZP_02311629.1| outer membrane protein A [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167424140|ref|ZP_02315893.1| outer membrane protein A [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|170024855|ref|YP_001721360.1| outer membrane protein A [Yersinia pseudotuberculosis YPIII]
gi|186894876|ref|YP_001871988.1| outer membrane protein A [Yersinia pseudotuberculosis PB1/+]
gi|218928581|ref|YP_002346456.1| outer membrane protein A [Yersinia pestis CO92]
gi|229841410|ref|ZP_04461569.1| outer membrane protein A (3a;II*;G;d) [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229843520|ref|ZP_04463663.1| outer membrane protein A (3a;II*;G;d) [Yersinia pestis biovar
Orientalis str. India 195]
gi|229894379|ref|ZP_04509562.1| outer membrane protein A (3a;II*;G;d) [Yersinia pestis Pestoides A]
gi|270486903|ref|ZP_06203977.1| outer membrane protein A [Yersinia pestis KIM D27]
gi|294503419|ref|YP_003567481.1| putative outer membrane porin A protein [Yersinia pestis Z176003]
gi|55976558|sp|Q8ZG77|OMPA_YERPE RecName: Full=Outer membrane protein A; Flags: Precursor
gi|55977792|sp|P38399|OMPA_YERPS RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II; Flags: Precursor
gi|51589075|emb|CAH20693.1| putative outer membrane porin A protein [Yersinia
pseudotuberculosis IP 32953]
gi|108776353|gb|ABG18872.1| outer membrane porin A protein [Yersinia pestis Nepal516]
gi|108778637|gb|ABG12695.1| putative outer membrane porin A protein [Yersinia pestis Antiqua]
gi|115347192|emb|CAL20086.1| putative outer membrane porin A protein [Yersinia pestis CO92]
gi|145210519|gb|ABP39926.1| outer membrane porin A protein [Yersinia pestis Pestoides F]
gi|149290964|gb|EDM41039.1| putative outer membrane porin A protein [Yersinia pestis CA88-4125]
gi|162351366|gb|ABX85314.1| outer membrane protein A [Yersinia pestis Angola]
gi|165911957|gb|EDR30601.1| outer membrane protein A [Yersinia pestis biovar Orientalis str.
IP275]
gi|165923673|gb|EDR40805.1| outer membrane protein A [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165989112|gb|EDR41413.1| outer membrane protein A [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166207499|gb|EDR51979.1| outer membrane protein A [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166962617|gb|EDR58638.1| outer membrane protein A [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167048300|gb|EDR59708.1| outer membrane protein A [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167056989|gb|EDR66752.1| outer membrane protein A [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|169751389|gb|ACA68907.1| OmpA domain protein transmembrane region-containing protein
[Yersinia pseudotuberculosis YPIII]
gi|186697902|gb|ACC88531.1| OmpA domain protein transmembrane region-containing protein
[Yersinia pseudotuberculosis PB1/+]
gi|229689128|gb|EEO81191.1| outer membrane protein A (3a;II*;G;d) [Yersinia pestis biovar
Orientalis str. India 195]
gi|229697776|gb|EEO87823.1| outer membrane protein A (3a;II*;G;d) [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229703777|gb|EEO90793.1| outer membrane protein A (3a;II*;G;d) [Yersinia pestis Pestoides A]
gi|262361462|gb|ACY58183.1| putative outer membrane porin A protein [Yersinia pestis D106004]
gi|262365389|gb|ACY61946.1| putative outer membrane porin A protein [Yersinia pestis D182038]
gi|270335407|gb|EFA46184.1| outer membrane protein A [Yersinia pestis KIM D27]
gi|294353878|gb|ADE64219.1| putative outer membrane porin A protein [Yersinia pestis Z176003]
gi|320015699|gb|ADV99270.1| outer membrane protein A [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 353
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 60/145 (41%), Gaps = 12/145 (8%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDC 81
D + + + ++ V F + +++P Q L L + ++ D
Sbjct: 201 DAAAPIVAPTPAPAPIVDTKRFTLKSDVLFGFNKANLKPEGQQALDQLYAQLSSIDPKDG 260
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE- 140
++ G AD +G ++AL RRA +V +Y V++GI A ++ G+ P +
Sbjct: 261 SVVVLGFADRIGQPAPNLALSQRRADSVRDYLVSKGIPADKITARGEGQANPVTGNTCDN 320
Query: 141 --------DAYAKNRRAIVFLKGCR 157
+ A +RR + +KG +
Sbjct: 321 VKPRAALIECLAPDRRVEIEVKGYK 345
>gi|330830616|ref|YP_004393568.1| putative porin [Aeromonas veronii B565]
gi|328805752|gb|AEB50951.1| putative porin [Aeromonas veronii B565]
Length = 512
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 49/137 (35%), Gaps = 7/137 (5%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC- 81
+ + + + + + DS F S + + ++V++ L K
Sbjct: 102 ATEKLTVAEPSAVTGVPQDAGLVAQIPDSGMFAIGSAQLTESGLRVVTKLAQLYSKPAAA 161
Query: 82 ------DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
L+ GH+D G ++ L +RA AV VA GI AS + G P
Sbjct: 162 DASNARRILLVGHSDATGPAELNLRLSEQRARAVGKILVASGIPASFIYYQGAGSSRPIA 221
Query: 136 YGHDEDAYAKNRRAIVF 152
D +NRR +
Sbjct: 222 DNSDPLLRGQNRRVEIV 238
>gi|239905906|ref|YP_002952645.1| chemotaxis protein MotB [Desulfovibrio magneticus RS-1]
gi|239795770|dbj|BAH74759.1| chemotaxis protein MotB [Desulfovibrio magneticus RS-1]
Length = 252
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 41/135 (30%), Gaps = 6/135 (4%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFL 84
D V+ + + + V F + L L + ++
Sbjct: 113 VSSKGLDGVVAATLEAGKITIGFPAGVLFPKDGVDLTEEGKGKLRTLFDFLIKAAGERIN 172
Query: 85 IEGHADELGS-----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
I G D + + RA AV Y V+ G+ +R+ T P
Sbjct: 173 IRGFTDNEPPGAGSRYRDNWEISSLRAVAVLRYMVSLGMPPNRLTATGLADLEPLYPNDT 232
Query: 140 EDAYAKNRRAIVFLK 154
+ A+N+R L+
Sbjct: 233 PEHRARNQRVEFVLE 247
>gi|294139825|ref|YP_003555803.1| OmpA family protein [Shewanella violacea DSS12]
gi|293326294|dbj|BAJ01025.1| OmpA family protein [Shewanella violacea DSS12]
Length = 210
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 55/146 (37%), Gaps = 9/146 (6%)
Query: 14 TMMSISGIDN----LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVL 69
++ SG D +++ D + + E ++ F+ + + + QVL
Sbjct: 66 VLVDASGCDKSRLFKPICLTTTDKQIYPDTCIEADDLTLN----FEFAKAEVSYSQWQVL 121
Query: 70 SNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSY 128
+ + +L+ +D D + GH D +G+ ++ L RA +V V G R V
Sbjct: 122 AQIKQFLQLNDVDLCLIGHTDSIGNLEANQRLSEARAKSVMRILVEDYGFEPGRFIVRGM 181
Query: 129 GKEMPSVYGHDEDAYAKNRRAIVFLK 154
G P NRR ++
Sbjct: 182 GTRSPIGTNDTPGGRTLNRRVNFLVE 207
>gi|256820526|ref|YP_003141805.1| OmpA/MotB domain-containing protein [Capnocytophaga ochracea DSM
7271]
gi|256582109|gb|ACU93244.1| OmpA/MotB domain protein [Capnocytophaga ochracea DSM 7271]
Length = 650
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVF 110
++FD + +IRP L+ + ++++ I H D + ++AL RRA A
Sbjct: 539 IYFDLNKSNIRPDAAVELAKIVEVMKQYPKMKIDIRSHTDSRATDAYNLALSDRRAKATL 598
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGH-----DEDAYAKNRRAIVFL 153
+ V +GI R+K YG+ E+ + NRR+ +
Sbjct: 599 EWIVKQGIDRKRLKAKGYGETQLVNGCSNGVPCTEEQHQANRRSEFIV 646
>gi|189347522|ref|YP_001944051.1| OmpA/MotB domain protein [Chlorobium limicola DSM 245]
gi|189341669|gb|ACD91072.1| OmpA/MotB domain protein [Chlorobium limicola DSM 245]
Length = 349
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 54/140 (38%), Gaps = 6/140 (4%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDS----VFFDTSSYSIRPADIQVLSNLGS 74
+ +D ++T+ V + + +S G ++FDT+ I+PA L +
Sbjct: 208 AAVDIIETRPMQQKMVTVSADEMSRSITSTGKVSLYGIYFDTNKADIKPASKPALGEIAK 267
Query: 75 W-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEM 132
++ + GH D G +++L RRA AV GI+ R+
Sbjct: 268 LLKKQPAMKLHVVGHTDNAGGYEFNVSLSKRRADAVVGVLQKEYGIAPGRLTANGVAYLA 327
Query: 133 PSVYGHDEDAYAKNRRAIVF 152
P E AKNRR +
Sbjct: 328 PVASNAAEAGRAKNRRVELV 347
>gi|124008177|ref|ZP_01692874.1| OmpA family protein [Microscilla marina ATCC 23134]
gi|123986276|gb|EAY26098.1| OmpA family protein [Microscilla marina ATCC 23134]
Length = 515
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 53/135 (39%), Gaps = 1/135 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
G D + T D V ++ + F+ T+ + + + + +
Sbjct: 374 GRDTIATDPIKVDNVPPKNLTTRDLEILKSTAYFYYTNDDINKATESLLNDIVVILKKHP 433
Query: 80 DCDFLIEGHADEL-GSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
D +EGH + + +++ L RRA AV Y V +GI +R+K YG + P
Sbjct: 434 DIYLELEGHTCNIGETEDANQNLSERRASAVKKYLVNKGIDENRLKTVGYGSKRPVASNK 493
Query: 139 DEDAYAKNRRAIVFL 153
E +NRR L
Sbjct: 494 TEFGKIRNRRVKFKL 508
>gi|110636839|ref|YP_677046.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
gi|110279520|gb|ABG57706.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
Length = 1313
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 44/134 (32%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ + + ++ + + F + + + + +
Sbjct: 1177 TTLEISNGTNDQVKNFELTPIKVGETIRLPHVYFARGGTTLLESSYESLDQLYTLLTDNP 1236
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ G+ D G ++ L +R A+ +Y V +GI+ +R+ YG P
Sbjct: 1237 TMRIELLGYTDNQGDAKLNVLLSEQRVAAIKDYLVGKGIAETRIGGKGYGGANPIASNAT 1296
Query: 140 EDAYAKNRRAIVFL 153
E+ NRR +
Sbjct: 1297 EETRQLNRRVEFKI 1310
>gi|15966529|ref|NP_386882.1| hypothetical protein SMc03992 [Sinorhizobium meliloti 1021]
gi|15075800|emb|CAC47355.1| Hypothetical protein signal peptide [Sinorhizobium meliloti 1021]
Length = 344
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 42/102 (41%), Gaps = 5/102 (4%)
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG-----SRNSSIALGLRRAYAVFN 111
+ +L + + ++GH D++ + L RA +V
Sbjct: 240 GQTEMAKLATALLDLAKEIPAEINWVLRVDGHTDDVQLSGIGRFRDNWELSSARATSVVK 299
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +++G+ A R+ +G+ P G ++A A+NRR + L
Sbjct: 300 FLISKGVPADRLVAAGFGEYQPIAPGESQEARAQNRRIELKL 341
>gi|50120684|ref|YP_049851.1| outer membrane protein A [Pectobacterium atrosepticum SCRI1043]
gi|49611210|emb|CAG74656.1| outer-membrane protein A [Pectobacterium atrosepticum SCRI1043]
Length = 366
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 71/161 (44%), Gaps = 12/161 (7%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
+L ++ + G D+ +++P + + E ++ V F+ + +++P Q
Sbjct: 198 LLMSVGLSYRFGQDDRVAPVAAPAPTPAPAPVVETKRFTLKSDVLFNFNKATLKPEGQQS 257
Query: 69 LSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
L L + L + D ++ G D LGS + AL +RA +V +Y V++GI A+++
Sbjct: 258 LDQLYTQLSSLDPKDGSVVVLGFTDRLGSEQYNQALSEKRAQSVVDYLVSKGIPANKVSA 317
Query: 126 TSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLKGCR 157
GK P + A +RR + +KG +
Sbjct: 318 RGLGKSQPVTGSTCDNVKPRAALIDCLAPDRRVEIEVKGIK 358
>gi|113970709|ref|YP_734502.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-4]
gi|113885393|gb|ABI39445.1| OmpA/MotB domain protein [Shewanella sp. MR-4]
Length = 290
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 36/72 (50%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
L++ + D G R+ + + +RA +V ++FVA GI R+ +G+ D +
Sbjct: 215 VLVDAYTDSYGGRSVNQKVSDKRAESVKDFFVASGIPQDRIVTVGHGERRHVASNEDIEE 274
Query: 143 YAKNRRAIVFLK 154
A NRR ++ +
Sbjct: 275 RALNRRVVIRIS 286
>gi|319952843|ref|YP_004164110.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
gi|319421503|gb|ADV48612.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
Length = 644
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 59/147 (40%), Gaps = 7/147 (4%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG-DSVFFDTSSYSIRPADIQVLSNL 72
T I+ +++ T + L + + + ++FD IR ++ +
Sbjct: 496 TSFKITSTTDINDLEILMTTNFTPADLGADLAEKLNLEKIYFDFDQSYIRKDAQAIMEKV 555
Query: 73 -GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
+ + I H D + N +++L RRA A ++Y V +GI ASR+ +G+
Sbjct: 556 VAYLNQYPNTKIRIGSHTDARANDNYNLSLSERRANATYDYLVKKGIDASRLTFKGFGET 615
Query: 132 MP--SVYGHDE---DAYAKNRRAIVFL 153
+ + + + NRR+ +
Sbjct: 616 QLTNACDNNTNCSSEKHQLNRRSEFIV 642
>gi|313201413|ref|YP_004040071.1| ompa/motb domain-containing protein [Methylovorus sp. MP688]
gi|312440729|gb|ADQ84835.1| OmpA/MotB domain protein [Methylovorus sp. MP688]
Length = 356
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 50/131 (38%), Gaps = 9/131 (6%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL---IEGHADELG 93
+ ++ V F +++ +VL+ K + I GH D +G
Sbjct: 224 GPAPAAFDKVTLQSEVLFGFDKDNLKEEGKKVLNADVVEKMKAHPEVELVLITGHTDRIG 283
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY------AKNR 147
+ L RRA AV Y V++GI ASR+ G+ P V NR
Sbjct: 284 DEAYNQKLSERRANAVKKYLVSQGIEASRLHAVGKGEAEPVVDCQGVRGKKAIACLQPNR 343
Query: 148 RAIVFLKGCRA 158
R +V ++ RA
Sbjct: 344 RVVVEIEVQRA 354
>gi|253999390|ref|YP_003051453.1| OmpA/MotB domain-containing protein [Methylovorus sp. SIP3-4]
gi|253986069|gb|ACT50926.1| OmpA/MotB domain protein [Methylovorus sp. SIP3-4]
Length = 356
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 50/131 (38%), Gaps = 9/131 (6%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL---IEGHADELG 93
+ ++ V F +++ +VL+ K + I GH D +G
Sbjct: 224 GPAPAAFDKVTLQSEVLFGFDKDNLKEEGKKVLNADVVEKMKAHPEVELVLITGHTDRIG 283
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY------AKNR 147
+ L RRA AV Y V++GI ASR+ G+ P V NR
Sbjct: 284 DEAYNQKLSERRANAVKKYLVSQGIEASRLHAVGKGEAEPVVDCQGVRGKKAIACLQPNR 343
Query: 148 RAIVFLKGCRA 158
R +V ++ RA
Sbjct: 344 RVVVEIEVQRA 354
>gi|152999646|ref|YP_001365327.1| OmpA/MotB domain-containing protein [Shewanella baltica OS185]
gi|217974400|ref|YP_002359151.1| OmpA/MotB domain-containing protein [Shewanella baltica OS223]
gi|151364264|gb|ABS07264.1| OmpA/MotB domain protein [Shewanella baltica OS185]
gi|217499535|gb|ACK47728.1| OmpA/MotB domain protein [Shewanella baltica OS223]
Length = 369
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 60/138 (43%), Gaps = 6/138 (4%)
Query: 22 DNLDTKISSPDT--VLNESSLQEQFSSSVGD--SVFFDTSSYSIRPADIQVLSNLGSW-L 76
D+ D ++P T V + + + D S+ F S ++P + + L ++
Sbjct: 222 DDKDQCPATPATHKVDSVGCTIYENVKTKEDVGSIQFANDSAVVKPVFYKDIERLANYLN 281
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSV 135
+ + I GHA +G ++ L +RA AV V + + R+ YG+ P V
Sbjct: 282 KNPEFTVEIAGHASHVGKPEYNMVLSDKRAAAVAKILVDKYGISQSRVTSKGYGETQPLV 341
Query: 136 YGHDEDAYAKNRRAIVFL 153
G ++AYA NRR +
Sbjct: 342 AGDSKEAYAANRRIEAVV 359
>gi|198282622|ref|YP_002218943.1| OmpA/MotB domain-containing protein [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218667641|ref|YP_002424813.1| OmpA family protein [Acidithiobacillus ferrooxidans ATCC 23270]
gi|198247143|gb|ACH82736.1| OmpA/MotB domain protein [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218519854|gb|ACK80440.1| OmpA family protein [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 217
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADELGSRNSSIALGLRRAYAVF 110
+ F SY + DI+VL + S+ +KH L + G+ ++G+ ++ L RA +V
Sbjct: 106 INFKFDSYKLLDHDIRVLDEVASFAKKHPEAVLDVNGYCSKVGTYAYNLKLSKLRAQSVA 165
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
Y G+++ RM + + + P N+R +
Sbjct: 166 QYLAHHGVASDRMVLKGHSYDNPVATNATPQGRFLNQRVEI 206
>gi|114327023|ref|YP_744180.1| outer membrane protein A [Granulibacter bethesdensis CGDNIH1]
gi|114315197|gb|ABI61257.1| outer membrane protein A [Granulibacter bethesdensis CGDNIH1]
Length = 361
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 42/103 (40%), Gaps = 1/103 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
VFFD + ++++ + + G+ D+ G+ + L +RRA +V
Sbjct: 258 VFFDWDRADLTARAREIVAEAARASTQVQATRIEVNGYTDKSGTPQYNQRLSVRRAQSVA 317
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V G+ + + + +G+ P V +NRR + L
Sbjct: 318 AELVKDGVPRNVIFIHGFGETHPLVPTAQGVREPQNRRVEIIL 360
>gi|94499552|ref|ZP_01306089.1| hypothetical protein RED65_00925 [Oceanobacter sp. RED65]
gi|94428306|gb|EAT13279.1| hypothetical protein RED65_00925 [Oceanobacter sp. RED65]
Length = 1644
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 34/103 (33%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
V F +P + + GH +G+ ++ L LRRA +V
Sbjct: 608 VTFAFDRSQFKPDNSFEDFKELFNSLPSSTKLTLIGHTCSIGTAEYNLGLSLRRAESVRK 667
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ R+ V G P+ E KNRR + +
Sbjct: 668 ALGFSDKDSERVFVEGRGMTDPAYDNSTEAGRQKNRRVVAQIS 710
>gi|290893982|ref|ZP_06556957.1| chemotaxis protein MotB [Listeria monocytogenes FSL J2-071]
gi|290556428|gb|EFD89967.1| chemotaxis protein MotB [Listeria monocytogenes FSL J2-071]
Length = 289
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 45/137 (32%), Gaps = 8/137 (5%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--LIEGHA 89
T + E ++ D + F + S + ++ +G + ++ GH
Sbjct: 148 GTKMTTKYSDEGLLITIRDDILFQSGSAELTAGKREIAKEIGELFAQGKGTMEGIVSGHT 207
Query: 90 DELGS----RNSSIALGLRRAYAVFNYFV--ARGISASRMKVTSYGKEMPSVYGHDEDAY 143
D + +S+ L + RA + ++ YG+ P
Sbjct: 208 DNVPISTSIYSSNWELSVARAVNFMEAIIQENSEVNPGEFSARGYGEFRPVAKNDIAANR 267
Query: 144 AKNRRAIVFLKGCRANT 160
KNRR + ++ +T
Sbjct: 268 EKNRRVEIMVRPINRDT 284
>gi|282877937|ref|ZP_06286746.1| OmpA family protein [Prevotella buccalis ATCC 35310]
gi|281299938|gb|EFA92298.1| OmpA family protein [Prevotella buccalis ATCC 35310]
Length = 227
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 55/141 (39%), Gaps = 2/141 (1%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ ++ + + + + + + F +S ++ L+ + L+ +
Sbjct: 76 AQETAAQVENAKVEEVKDKNGLDAVKVTFDSGILFASSKANLNQTSKNELAKFSTVLKNN 135
Query: 80 -DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYG 137
DC + GH D G+ +I L RA +V NY + G+ +S+ + V G P
Sbjct: 136 KDCHIDVYGHTDSTGNDGINIPLSNDRARSVVNYLKSCGVPSSQFQNVVGQGSTQPVADN 195
Query: 138 HDEDAYAKNRRAIVFLKGCRA 158
+ NRR VFL A
Sbjct: 196 ATKAGRQLNRRVEVFLYASPA 216
>gi|54308004|ref|YP_129024.1| flagellar motor protein MotB [Photobacterium profundum SS9]
gi|46912430|emb|CAG19222.1| putative sodium-driven polar flagellar protein MotB [Photobacterium
profundum SS9]
Length = 310
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 42/129 (32%), Gaps = 5/129 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
D + + +Q + + F S ++P ++ + ++ I GH D
Sbjct: 162 QDGAIEVENFGQQVVIRIKEKGAFPAGSAFLQPKFRPLVRQIADLVKDVPGIIRISGHTD 221
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
S+ L +RA +V +G R++V P +
Sbjct: 222 NQKLDSELYRSNWDLSAQRAVSVAQEMEQVKGFDHKRLRVVGLADTAPLNSNKTAEERKV 281
Query: 146 NRRAIVFLK 154
NRR + +
Sbjct: 282 NRRVEISIM 290
>gi|326796261|ref|YP_004314081.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
gi|326547025|gb|ADZ92245.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
Length = 213
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 56/135 (41%), Gaps = 9/135 (6%)
Query: 22 DNLDTKISSP-----DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
D DT +P D S + SS + V F+T Y+++P L LG +L
Sbjct: 46 DARDTCPDTPLKSLIDNNGCPSHTVKTLSSEL--DVHFETGKYNLKPKYYPGLVELGKFL 103
Query: 77 EKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPS 134
+K+ +I GH D++G S+ L RRA ++ + R+ YG+ P
Sbjct: 104 QKNPNTIAIITGHTDDIGDEESNEILSQRRAQSIAKALSEKFKIDIERIVALGYGESRPM 163
Query: 135 VYGHDEDAYAKNRRA 149
+ KNRR
Sbjct: 164 YPNETDVERRKNRRV 178
>gi|259090555|gb|ACV91900.1| OprL [Pseudomonas fluorescens]
gi|259090583|gb|ACV91914.1| OprL [Pseudomonas fluorescens]
gi|309244355|gb|ADO52182.1| OprL [Pseudomonas poae]
gi|309244357|gb|ADO52183.1| OprL [Pseudomonas poae]
gi|309244359|gb|ADO52184.1| OprL [Pseudomonas trivialis]
gi|309244361|gb|ADO52185.1| OprL [Pseudomonas trivialis]
gi|309244363|gb|ADO52186.1| OprL [Pseudomonas trivialis]
gi|309244365|gb|ADO52187.1| OprL [Pseudomonas trivialis]
gi|309244367|gb|ADO52188.1| OprL [Pseudomonas trivialis]
gi|309244369|gb|ADO52189.1| OprL [Pseudomonas trivialis]
gi|309244371|gb|ADO52190.1| OprL [Pseudomonas sp. 'ribotype C P501-02']
gi|309244373|gb|ADO52191.1| OprL [Pseudomonas sp. 'ribotype C P515-18']
gi|309244375|gb|ADO52192.1| OprL [Pseudomonas sp. 'ribotype C P527-22']
Length = 157
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/128 (28%), Positives = 66/128 (51%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+ G +T + SL E+ + + +F+ S ++P ++ L L
Sbjct: 30 AGEGAAVDPNAGYGANTGAVDGSLSEEAALRAITTFYFEYDSSDLKPEAMRALDVHAKDL 89
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ + ++EG+ DE G+R ++ALG RRA AV Y V +G++ ++++ SYGKE P
Sbjct: 90 KANGARVVLEGNTDERGTREYNMALGERRAKAVQRYLVLQGVAPGQLELVSYGKERPVAT 149
Query: 137 GHDEDAYA 144
GHD ++A
Sbjct: 150 GHDXQSWA 157
>gi|90410908|ref|ZP_01218922.1| flagellar motor protein [Photobacterium profundum 3TCK]
gi|90328121|gb|EAS44432.1| flagellar motor protein [Photobacterium profundum 3TCK]
Length = 310
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 42/129 (32%), Gaps = 5/129 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
D + + +Q + + F S ++P ++ + ++ I GH D
Sbjct: 162 QDGAIEVENFGQQVVIRIKEKGAFPAGSAFLQPKFRPLVRQIADLVKDVPGIIRISGHTD 221
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
S+ L +RA +V +G R++V P +
Sbjct: 222 NQKLDSELYRSNWDLSAQRAVSVAQEMEQVKGFDHKRLRVVGLADTAPLNSNKTAEERKV 281
Query: 146 NRRAIVFLK 154
NRR + +
Sbjct: 282 NRRVEISIM 290
>gi|2499351|sp|Q99124|OMPA_ESCBL RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II
gi|146989|gb|AAA24235.1| outer membrane protein II [Escherichia blattae]
Length = 241
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 60/156 (38%), Gaps = 12/156 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + +S D + + ++ V F+ + +++P Q L
Sbjct: 85 GMLSVGVSYRFGQDEAAPVVAPAPAPAPQVQTKHFTLKSDVLFNFNKSTLKPEGQQALDQ 144
Query: 72 LGSWLEKHDCD---FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L + L D ++ G+ D +GS + L +RA +V +Y V++GI A ++
Sbjct: 145 LYTQLSNLDPKDGAVVVLGYTDRIGSDAYNQRLSQQRAQSVVDYLVSKGIPAGKITAQGQ 204
Query: 129 GKEMPS--VYGHDEDAYAK-------NRRAIVFLKG 155
G+ P + A +RR + +KG
Sbjct: 205 GESNPVTGNTCDNVKKRAALIDCLAPDRRVEIEVKG 240
>gi|51244590|ref|YP_064474.1| peptidoglycan-associated lipoprotein precursor [Desulfotalea
psychrophila LSv54]
gi|50875627|emb|CAG35467.1| related to peptidoglycan-associated lipoprotein precursor
[Desulfotalea psychrophila LSv54]
Length = 231
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 52/134 (38%), Gaps = 6/134 (4%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVG-----DSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
DT ++ L + V+F I P +V+
Sbjct: 96 DTDSNAAAEELASKQSEAYLQQHGRSSIEFQPVYFKFDQTMINPEMQEVIFENAQVLKRN 155
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+EG+ D+ G+ ++ALG +RA V Y ++ GI +R++ S G+E P
Sbjct: 156 PTLYITVEGNTDDRGTNEYNMALGEKRAINVEKYLISLGIGENRIRTVSLGEERPLFPTQ 215
Query: 139 DEDAYAKNRRAIVF 152
E AY NRRA
Sbjct: 216 TEAAYLYNRRADFI 229
>gi|284041524|ref|YP_003391864.1| OmpA/MotB domain protein [Conexibacter woesei DSM 14684]
gi|283945745|gb|ADB48489.1| OmpA/MotB domain protein [Conexibacter woesei DSM 14684]
Length = 290
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 51/128 (39%), Gaps = 5/128 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
D V + + + D V FD+ ++ + +L+++G+ L L+EGH D
Sbjct: 141 DQVEAVVARRGLVVRLLTDQVLFDSGFADLKSEGMPLLTHVGNLLVIDRIHPILVEGHTD 200
Query: 91 ----ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S+ L RA V Y + RG+ R + Y P + A+N
Sbjct: 201 DVPISTSRFESNWELSTARATEVVRYLIDRGVPTRRFGASGYADLHPLGSNGTDRGRARN 260
Query: 147 RRAIVFLK 154
RR V L+
Sbjct: 261 RRVEVVLQ 268
>gi|300023960|ref|YP_003756571.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888]
gi|299525781|gb|ADJ24250.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888]
Length = 342
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 12/114 (10%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIEGHAD----ELGSRNSSI 99
V F + S S+ P + + + + + + I GH D S+
Sbjct: 226 VLFSSGSASLTPEGMAAMDQIAEAILELQKEIPGDIDWALQINGHTDARPISNPQYPSNW 285
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V Y V RG+ A R+ YG+ P + E+AY +NRR + L
Sbjct: 286 ELSTARAASVVKYLVLRGVPADRLVAAGYGEFQPVDASNTEEAYQRNRRIELKL 339
>gi|311106822|ref|YP_003979675.1| OmpA family protein 2 [Achromobacter xylosoxidans A8]
gi|310761511|gb|ADP16960.1| OmpA family protein 2 [Achromobacter xylosoxidans A8]
Length = 216
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 52/131 (39%), Gaps = 10/131 (7%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS----NLGSWLEKHDCDFLIE 86
+ + SV F +S ++P +VL L ++L+ H+ ++
Sbjct: 70 AGPLAAGRVTLIDGRIGISGSVLFALNSDQLQPEGREVLKSLIEPLSAYLKSHNEILMVS 129
Query: 87 GHADELG------SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
G+ D+ + L +RA V + G+ +S + ++G E P DE
Sbjct: 130 GYTDDQQVREGNRRFADNWDLSAQRALTVTRALIDEGVPSSAVFAAAFGSEQPVAANTDE 189
Query: 141 DAYAKNRRAIV 151
+ AKNRR +
Sbjct: 190 EGRAKNRRVEI 200
>gi|260467043|ref|ZP_05813223.1| OmpA/MotB domain protein [Mesorhizobium opportunistum WSM2075]
gi|259029152|gb|EEW30448.1| OmpA/MotB domain protein [Mesorhizobium opportunistum WSM2075]
Length = 343
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 43/118 (36%), Gaps = 5/118 (4%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG-----SR 95
Q + G V D ++ ++ + + ++GH D
Sbjct: 223 QSEVLFPTGSEVINDAGKVEMKKLADAIIELQKEIPPEINWVLRVDGHTDNKPLSGTGRY 282
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L R+ +V + + G+ A+R+ +G+ P E+A KNRR + L
Sbjct: 283 RDNWELSTARSTSVVKFLIENGVPANRLVAAGFGEFQPLDPADTEEARNKNRRIELKL 340
>gi|312142545|ref|YP_003993991.1| OmpA/MotB domain protein [Halanaerobium sp. 'sapolanicus']
gi|311903196|gb|ADQ13637.1| OmpA/MotB domain protein [Halanaerobium sp. 'sapolanicus']
Length = 352
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/151 (20%), Positives = 60/151 (39%), Gaps = 6/151 (3%)
Query: 7 FIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVF---FDTSSYSIRP 63
F + + + +D ++ V E+ +++ S + +++ F+ S I
Sbjct: 199 FAMAPSTGAKAKIQLDVVELAPMEEGLVSVEN-MEDDLSRTGKAAIYGINFEFDSSQILA 257
Query: 64 ADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS-AS 121
VL+ + L E + + GH D+LGS + L RRA +V ++ + +
Sbjct: 258 DSHDVLAEIAKLLLENPELRLYVVGHTDDLGSLQYNRNLSERRAESVVDFLIDNHDIASD 317
Query: 122 RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
R+ G P E A NRR ++
Sbjct: 318 RLISAGVGPLAPESTNKTESGRALNRRVVLV 348
>gi|307721192|ref|YP_003892332.1| OmpA/MotB domain-containing protein [Sulfurimonas autotrophica DSM
16294]
gi|306979285|gb|ADN09320.1| OmpA/MotB domain protein [Sulfurimonas autotrophica DSM 16294]
Length = 259
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 51/149 (34%), Gaps = 8/149 (5%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVL---SNLGSW 75
+ D + + + Q+ F + ++ F+ S +I D + L
Sbjct: 94 AAGDANEMMEKTQSPAITIKEAQDGFVIKLPATLLFNPGSATIENQDALLFLKRITLIIQ 153
Query: 76 LEKHDCDFLIEGHADE-----LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
+D ++GH D + L RA AV + + G+ +RM T + +
Sbjct: 154 ELPNDMLVDVQGHTDNTGPGANSPYKDNWELSTARALAVLHELILDGVDPARMSATGFAQ 213
Query: 131 EMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
P KNRR + G + +
Sbjct: 214 YQPIATNATATGREKNRRVELHFYGKKND 242
>gi|153947861|ref|YP_001401507.1| outer membrane protein A [Yersinia pseudotuberculosis IP 31758]
gi|152959356|gb|ABS46817.1| outer membrane protein A [Yersinia pseudotuberculosis IP 31758]
Length = 357
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 60/145 (41%), Gaps = 12/145 (8%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDC 81
D + + + ++ V F + +++P Q L L + ++ D
Sbjct: 205 DAAAPIVAPTPAPAPIVDTKRFTLKSDVLFGFNKANLKPEGQQALDQLYAQLSSIDPKDG 264
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE- 140
++ G AD +G ++AL RRA +V +Y V++GI A ++ G+ P +
Sbjct: 265 SVVVLGFADRIGQPAPNLALSQRRADSVRDYLVSKGIPADKITARGEGQANPVTGNTCDN 324
Query: 141 --------DAYAKNRRAIVFLKGCR 157
+ A +RR + +KG +
Sbjct: 325 VKPRAALIECLAPDRRVEIEVKGYK 349
>gi|313887354|ref|ZP_07821045.1| OmpA family protein [Porphyromonas asaccharolytica PR426713P-I]
gi|332299263|ref|YP_004441184.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707]
gi|312923273|gb|EFR34091.1| OmpA family protein [Porphyromonas asaccharolytica PR426713P-I]
gi|332176326|gb|AEE12016.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707]
Length = 225
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/129 (24%), Positives = 52/129 (40%), Gaps = 1/129 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF-L 84
+ T + + + + F+TSS ++ + L L K+D
Sbjct: 81 EQQLPAGTQVETVNEGQAIKVVFDSGLLFNTSSSTLSSSSRNDLRKFADNLNKNDDTVLE 140
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
I GH D G+ + L L RA +V ++ +G+S+ RMK G P +
Sbjct: 141 IIGHTDSSGNDRINDPLSLNRAKSVRDFLEGQGVSSVRMKYEGRGSHEPVDTNATAEGKR 200
Query: 145 KNRRAIVFL 153
KNRR VF+
Sbjct: 201 KNRRVEVFI 209
>gi|313624928|gb|EFR94836.1| chemotaxis protein MotB [Listeria innocua FSL J1-023]
Length = 275
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 45/137 (32%), Gaps = 8/137 (5%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--LIEGHA 89
+ +E ++ D + F + S + ++ +G + ++ GH
Sbjct: 134 GAKITTKYSEEGLLITIRDDILFQSGSAELSADKREIAKEIGELFAQGKGTMEGIVSGHT 193
Query: 90 DELGS----RNSSIALGLRRAYAVFNYFV--ARGISASRMKVTSYGKEMPSVYGHDEDAY 143
D + +S+ L + RA + ++ YG+ P
Sbjct: 194 DNVPISTSIYSSNWELSVARAVNFMEAIIQENSEVNPGEFSARGYGEFRPVAKNDIATNR 253
Query: 144 AKNRRAIVFLKGCRANT 160
KNRR + ++ +T
Sbjct: 254 EKNRRVEIMVRPINRDT 270
>gi|282877998|ref|ZP_06286806.1| OmpA family protein [Prevotella buccalis ATCC 35310]
gi|281299833|gb|EFA92194.1| OmpA family protein [Prevotella buccalis ATCC 35310]
Length = 288
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 49/119 (41%), Gaps = 11/119 (9%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADE---------LGSR 95
S+ D++ + + SY I + LS + ++ D D L+EG+ D + +
Sbjct: 148 ISLADNMLYKSGSYEINDRAAETLSKIAKIIMDYKDYDVLVEGNTDNVPVNQNSPLMKNI 207
Query: 96 NSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L RA +V + + + RM G+ P + E +NRR + +
Sbjct: 208 RNNWDLSTLRASSVVQFLQSHYGVDPKRMTAGGRGEYNPLTSNNTELGKQRNRRTQIII 266
>gi|319427140|gb|ADV55214.1| OmpA/MotB domain protein [Shewanella putrefaciens 200]
Length = 197
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 41/105 (39%), Gaps = 2/105 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
V+F+ + + + + L+ + +D ++ GH D +G+ + L L+RA V
Sbjct: 90 IVYFEFAIAEVDLSQWKSLALVKAFLEANNDVALILVGHTDIVGTPEFNYQLSLQRAENV 149
Query: 110 FNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V G + +R + G P + NRR +
Sbjct: 150 RRILVEDYGFNPNRFTIVGKGISEPVADNRSSEGRRLNRRVQFIV 194
>gi|148555193|ref|YP_001262775.1| OmpA/MotB domain-containing protein [Sphingomonas wittichii RW1]
gi|148500383|gb|ABQ68637.1| OmpA/MotB domain protein [Sphingomonas wittichii RW1]
Length = 373
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAV 109
VFFD I +L N + + GHAD+ GS ++ L RRA +V
Sbjct: 267 IVFFDWDKSDITAEAASILDNAANAYATTGQARVQLAGHADKSGSDQYNVGLSQRRADSV 326
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
Y +G+ S + ++G+ P V D +NRR +
Sbjct: 327 KAYLAGKGVPDSAITTEAFGESRPLVETADGVREPQNRRVEIT 369
>gi|126176195|ref|YP_001052344.1| OmpA/MotB domain-containing protein [Shewanella baltica OS155]
gi|160877206|ref|YP_001556522.1| OmpA/MotB domain-containing protein [Shewanella baltica OS195]
gi|304412239|ref|ZP_07393848.1| OmpA/MotB domain protein [Shewanella baltica OS183]
gi|307306983|ref|ZP_07586723.1| OmpA/MotB domain protein [Shewanella baltica BA175]
gi|125999400|gb|ABN63475.1| OmpA/MotB domain protein [Shewanella baltica OS155]
gi|160862728|gb|ABX51262.1| OmpA/MotB domain protein [Shewanella baltica OS195]
gi|304349505|gb|EFM13914.1| OmpA/MotB domain protein [Shewanella baltica OS183]
gi|306910561|gb|EFN40991.1| OmpA/MotB domain protein [Shewanella baltica BA175]
gi|315269410|gb|ADT96263.1| OmpA/MotB domain protein [Shewanella baltica OS678]
Length = 202
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/188 (20%), Positives = 59/188 (31%), Gaps = 28/188 (14%)
Query: 1 MQYSTIFI---ILSAITMM------SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD- 50
M+ T F+ +L+ +M ++ D D V+ + G
Sbjct: 1 MKTLTFFLSVTLLAGCSMRDTVNIDEMTTTQAYDLSDKDGDGVIEARERCNDTAQGAGTD 60
Query: 51 ----------------SVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELG 93
++ F S I P + + + + IEGH G
Sbjct: 61 NYGCGKIKAINERKEINILFPNDSAYIAPEYYPQIEEVAIFLRQYPTTKVTIEGHTSRTG 120
Query: 94 SRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ + L RA AV R I SR+ YG P V DA +NRR +
Sbjct: 121 TDERNAVLSQDRANAVTAVLAERFSIDRSRLTAIGYGSSRPVVLEQTPDAEIRNRRVVAE 180
Query: 153 LKGCRANT 160
+ G T
Sbjct: 181 VTGDDTAT 188
>gi|94495568|ref|ZP_01302148.1| hypothetical protein SKA58_05950 [Sphingomonas sp. SKA58]
gi|94424956|gb|EAT09977.1| hypothetical protein SKA58_05950 [Sphingomonas sp. SKA58]
Length = 290
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 49/142 (34%), Gaps = 3/142 (2%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEK 78
+ ++ + + + +Q++ +V FDT ++ P L S +
Sbjct: 145 TAQGFAEQSAATEALRGRVADIDQYNVKATTNVNFDTGKTALSPQAKSDLCATAASAEQM 204
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS--RMKVTSYGKEMPSVY 136
+ L+ G+ D G + L +RA V NY + T + P
Sbjct: 205 DNALLLVVGYTDSTGPEEYNQMLSEKRAGRVVNYLQQHCNWKPYRMLTPTGMSEAQPIAS 264
Query: 137 GHDEDAYAKNRRAIVFLKGCRA 158
E A+NRR V + +
Sbjct: 265 NDTEQGKAENRRVSVNILVSKG 286
>gi|16799769|ref|NP_470037.1| hypothetical protein lin0694 [Listeria innocua Clip11262]
gi|16413146|emb|CAC95926.1| motB [Listeria innocua Clip11262]
gi|313620085|gb|EFR91593.1| chemotaxis protein MotB [Listeria innocua FSL S4-378]
Length = 275
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 44/137 (32%), Gaps = 8/137 (5%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--LIEGHA 89
+ E ++ D + F + S + ++ +G + ++ GH
Sbjct: 134 GAKITTKYSDEGLLITIRDDILFQSGSAELSADKREIAKEIGELFAQGKGTMEGIVSGHT 193
Query: 90 DELGS----RNSSIALGLRRAYAVFNYFV--ARGISASRMKVTSYGKEMPSVYGHDEDAY 143
D + +S+ L + RA + ++ YG+ P
Sbjct: 194 DNVPISTSIYSSNWELSVARAVNFMEAIIQENSEVNPGEFSARGYGEFRPVAKNDIATNR 253
Query: 144 AKNRRAIVFLKGCRANT 160
KNRR + ++ +T
Sbjct: 254 EKNRRVEIMVRPINRDT 270
>gi|281357860|ref|ZP_06244346.1| OmpA/MotB domain protein [Victivallis vadensis ATCC BAA-548]
gi|281315807|gb|EFA99834.1| OmpA/MotB domain protein [Victivallis vadensis ATCC BAA-548]
Length = 216
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 67/130 (51%), Gaps = 4/130 (3%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
G + + D + + + + ++F S + P++ L + +++
Sbjct: 79 GAEQGSAIGADADGWVPADPTGNRLNMPI---IYFAYDSDVLVPSETANLDRIAAYMSDK 135
Query: 80 D-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
L+EGH D+ G+ + ALG RRA A+ Y +G++ +RMK SYG++ P+V G+
Sbjct: 136 PELGLLVEGHCDQRGTEEYNRALGERRANAIRAYLAGKGLADTRMKTISYGEDKPAVEGN 195
Query: 139 DEDAYAKNRR 148
+E+A+ +NRR
Sbjct: 196 NEEAWRQNRR 205
>gi|217965216|ref|YP_002350894.1| chemotaxis protein MotB [Listeria monocytogenes HCC23]
gi|217334486|gb|ACK40280.1| chemotaxis protein MotB (Motility protein B) [Listeria
monocytogenes HCC23]
gi|307570225|emb|CAR83404.1| chemotaxis protein [Listeria monocytogenes L99]
Length = 275
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 45/137 (32%), Gaps = 8/137 (5%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--LIEGHA 89
T + E ++ D + F + S + ++ +G + ++ GH
Sbjct: 134 GTKMTTKYSDEGLLITIRDDILFQSGSAELTAGKREIAKEIGELFAQGKGTMEGIVSGHT 193
Query: 90 DELGS----RNSSIALGLRRAYAVFNYFV--ARGISASRMKVTSYGKEMPSVYGHDEDAY 143
D + +S+ L + RA + ++ YG+ P
Sbjct: 194 DNVPISTSIYSSNWELSVARAVNFMEAIIQENSEVNPGEFSARGYGEFRPVAKNDIAANR 253
Query: 144 AKNRRAIVFLKGCRANT 160
KNRR + ++ +T
Sbjct: 254 EKNRRVEIMVRPINRDT 270
>gi|24374850|ref|NP_718893.1| OmpA family protein [Shewanella oneidensis MR-1]
gi|24349542|gb|AAN56337.1|AE015771_7 OmpA family protein [Shewanella oneidensis MR-1]
Length = 196
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 52/153 (33%), Gaps = 17/153 (11%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---------------SVFFDTSSYSIR 62
+T + + V + ++ D V+F+ + +
Sbjct: 41 ACPNTPANTSVMANGCVDEVEVTSDNIQCNLNDPSTYSASDCHHIETAIVYFEFAIAEVD 100
Query: 63 PADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISA 120
+ + L+ + S+LE + + GH D +G+ + L L+RA V V G +
Sbjct: 101 LSQWKALALVKSFLEANTETKLTLVGHTDIVGTPEFNYQLSLQRAQNVKRILVEDYGFNP 160
Query: 121 SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+R V G P + NRR +
Sbjct: 161 NRFTVVGKGISEPVADNRSSEGRGLNRRVQFIV 193
>gi|294635647|ref|ZP_06714122.1| outer membrane protein A [Edwardsiella tarda ATCC 23685]
gi|291090994|gb|EFE23555.1| outer membrane protein A [Edwardsiella tarda ATCC 23685]
Length = 356
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 57/129 (44%), Gaps = 12/129 (9%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDCDFLIEGHADELGSRNS 97
E ++ V F+ + Y+++ Q L L + ++ D ++ G+ D +GS
Sbjct: 220 VETKRFTLKSDVLFNFNKYTLKAEGRQALDQLYTQLSSMDPKDGSVVVLGYTDRIGSDQY 279
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRR 148
++ L +RA V +Y V++GI A ++ GK P + A +RR
Sbjct: 280 NLKLSKQRAQTVVDYLVSKGIPADKITARGMGKADPVTGATCDNVKPRAALINCLAPDRR 339
Query: 149 AIVFLKGCR 157
++ +KG +
Sbjct: 340 VVIEVKGIK 348
>gi|213964024|ref|ZP_03392268.1| OmpA/MotB domain protein [Capnocytophaga sputigena Capno]
gi|213953356|gb|EEB64694.1| OmpA/MotB domain protein [Capnocytophaga sputigena Capno]
Length = 635
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 6/108 (5%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVF 110
++FD + IRP L+ + ++++ I H D S ++AL RRA +
Sbjct: 524 IYFDLNKSDIRPDAAVELAKIVEVMKEYPKMKIDIRSHTDSRASDAYNLALSDRRAKSTL 583
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGH-----DEDAYAKNRRAIVFL 153
+ V +GI R+ YG+ E+ + NRR+ +
Sbjct: 584 EWIVKQGIERKRLTAKGYGETRLVNGCSNGVPCTEEEHQANRRSEFIV 631
>gi|170736167|ref|YP_001777427.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
MC0-3]
gi|169818355|gb|ACA92937.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3]
Length = 223
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 56/153 (36%), Gaps = 15/153 (9%)
Query: 16 MSISGIDNLDTKISSP----------DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPAD 65
+ + +D + P + ++ + + F+ + P
Sbjct: 69 AATAAVDTAKADPAPPWLALLDSLKSNGRISLVKAPHGVEIGIDAKILFNVGDARLLPDS 128
Query: 66 IQVLSNLGSWLEKHDC-DFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISA 120
VL+ + L H D L+EGH D + S+ L RA +V Y RG++
Sbjct: 129 SPVLNQIAQALSAHTTGDILVEGHTDSVPIANAKYESNWELSSARAGSVVRYLSERGVAP 188
Query: 121 SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
R+ P V G D + A+NRR +F+
Sbjct: 189 HRLAAIGRADTQPLVAGGDAGSRARNRRVTIFV 221
>gi|29467513|dbj|BAC66780.1| OmpA-like outer membrane protein [Acidithiobacillus ferrooxidans]
Length = 217
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADELGSRNSSIALGLRRAYAVF 110
+ F SY + DI+VL + S+ + H L + G+ ++G+ ++ L RA +V
Sbjct: 106 INFKFDSYKLLDHDIRVLDEVASFAKNHPEAVLDVNGYCSKVGTYAYNLKLSKLRAQSVA 165
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
Y G+++ RM + + + P N+R +
Sbjct: 166 QYLAHHGVASDRMVLKGHSYDNPVATNATPQGRFLNQRVEI 206
>gi|291532054|emb|CBK97639.1| Flagellar motor protein [Eubacterium siraeum 70/3]
Length = 339
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 45/127 (35%), Gaps = 4/127 (3%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF---LIEGHADELGS 94
+ +++ FD +S ++ QVL+ ++ + + GH + S
Sbjct: 124 EQTPTRIFIRFNNTIMFDGNSAVLKEEGKQVLNKFMPGIKAVNKYIKSCEVSGHTAKAVS 183
Query: 95 RNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA +V Y R + + + V P + A NRR + +
Sbjct: 184 DVNDWDLSAARASSVVKYMDYNRCVDSEKFTVEGKACYTPIADNSTAEGRATNRRVEIMI 243
Query: 154 KGCRANT 160
+ +T
Sbjct: 244 VRAQLDT 250
>gi|282881335|ref|ZP_06290015.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1]
gi|281304811|gb|EFA96891.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1]
Length = 225
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 55/136 (40%), Gaps = 2/136 (1%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
+ ++ + + + + + + F +S + A L+ + +
Sbjct: 74 AAETAAQVENAKVEEVTDKNGLKAVKVTFDSGILFASSKAILNQASKNELAKFSTVLKKN 133
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYG 137
DC I GH D G+ +I L RA +V NY + G+S+S+ + V+ G P
Sbjct: 134 RDCHVDILGHTDSTGNDGINIPLSNDRAQSVVNYLKSCGVSSSQFQNVSGMGSSQPVATN 193
Query: 138 HDEDAYAKNRRAIVFL 153
+ +NRR V+L
Sbjct: 194 ETKAGRQQNRRVEVYL 209
>gi|197284675|ref|YP_002150547.1| outer membrane protein A [Proteus mirabilis HI4320]
gi|194682162|emb|CAR41796.1| outer membrane protein A [Proteus mirabilis HI4320]
Length = 362
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 58/122 (47%), Gaps = 12/122 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGS---WLEKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + S++ + L+ L + ++ ++ G+ D +GS+N ++ L
Sbjct: 232 TLRSDVLFNYNKSSLKAEGQEALNGLYNELANIDPTQGRVVVIGYTDRIGSQNYNLPLSE 291
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
+RA +V +Y V++GI A+ + GKE P + A A +RR + ++
Sbjct: 292 KRAQSVVDYLVSKGIPANSISAEGRGKENPVTGNTCDNIKARAALIDCLAPDRRVEIEIQ 351
Query: 155 GC 156
G
Sbjct: 352 GT 353
>gi|149178577|ref|ZP_01857164.1| OmpA/MotB [Planctomyces maris DSM 8797]
gi|148842595|gb|EDL56971.1| OmpA/MotB [Planctomyces maris DSM 8797]
Length = 278
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 46/114 (40%), Gaps = 11/114 (9%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGS--------RNSSI 99
+ F + S +++PA ++L+ + + + L+ GH D+ ++
Sbjct: 147 DILFSSGSDNLKPAAQEILNQFAAIMNDGNAKRLNVLVVGHTDDKPISKASTQRQHRTNW 206
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V G+ RM Y P V ++ A KNRR +F+
Sbjct: 207 HLSTNRANSVVLTLSKFGVKQERMGAAGYSMFQPVVPNQNDSARQKNRRVEIFV 260
>gi|54307864|ref|YP_128884.1| hypothetical protein PBPRA0661 [Photobacterium profundum SS9]
gi|46912290|emb|CAG19082.1| hypothetical protein PBPRA0661 [Photobacterium profundum SS9]
Length = 439
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 42/115 (36%), Gaps = 4/115 (3%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RN 96
++ + + F + S ++ + +LS + LE + +I GH D+
Sbjct: 314 ADRIRIVLNSNDLFASGSNEVKASIAPILSKIAHTLESTNGRIMIVGHTDDKPIFTSKYP 373
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
S+ L L RA AV N R+ G P + A NRR +
Sbjct: 374 SNWHLSLARATAVANVLAMGTELRGRLWPEGQGDANPRNPNTSKANRASNRRVEI 428
>gi|315223626|ref|ZP_07865480.1| OmpA/MotB domain protein [Capnocytophaga ochracea F0287]
gi|314946407|gb|EFS98402.1| OmpA/MotB domain protein [Capnocytophaga ochracea F0287]
Length = 652
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVF 110
++FD + +IRP L+ + ++++ I H D + ++AL RRA A
Sbjct: 541 IYFDLNKSNIRPDAAVELAKIVEVMKQYPKMKIDIRSHTDSRATDAYNLALSDRRAKATL 600
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGH-----DEDAYAKNRRAIVFL 153
+ V +GI R+K YG+ E+ + NRR+ +
Sbjct: 601 EWIVKQGIDRKRLKAKGYGETQLVNGCSNGVPCTEEQHQANRRSEFIV 648
>gi|326203246|ref|ZP_08193111.1| OmpA/MotB domain protein [Clostridium papyrosolvens DSM 2782]
gi|325986504|gb|EGD47335.1| OmpA/MotB domain protein [Clostridium papyrosolvens DSM 2782]
Length = 258
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 51/128 (39%), Gaps = 7/128 (5%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHAD 90
++ + + ++ + + F + S I P D + +G + + + +EGH D
Sbjct: 111 GNVSVTMQERGIVVTINEKILFKSGSAIIEPNDQDTVIKIGKDILSKIPNKHIRVEGHTD 170
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ S+ L RA V V +G I+ + YG+ P V + AK
Sbjct: 171 NIPMKSALYPSNWELSAARAINVLKLLVDKGGINPKMIAPVPYGEYSPLVPNTTDINRAK 230
Query: 146 NRRAIVFL 153
NRR + +
Sbjct: 231 NRRVDIVI 238
>gi|91792716|ref|YP_562367.1| OmpA/MotB [Shewanella denitrificans OS217]
gi|91714718|gb|ABE54644.1| OmpA/MotB [Shewanella denitrificans OS217]
Length = 209
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 40/103 (38%), Gaps = 1/103 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
V+F+ + + +L + + + GH D +GS + L L+RA V
Sbjct: 103 VYFEFAKSQVLQTQKPLLKKIAMLANQSGAKITLVGHTDIIGSEAFNQNLSLKRAMNVSA 162
Query: 112 YFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
VA G+ AS + G P+ + NRR + +
Sbjct: 163 VLVAEYGLMASDIHYYGVGSTEPADDNATANGRQANRRVEITI 205
>gi|73667180|ref|YP_303196.1| OmpA/MotB domain-containing protein [Ehrlichia canis str. Jake]
gi|72394321|gb|AAZ68598.1| OmpA/MotB domain [Ehrlichia canis str. Jake]
Length = 162
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/168 (22%), Positives = 70/168 (41%), Gaps = 16/168 (9%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M++ +FI + + +S D + + + ++FD +
Sbjct: 1 MKHKLVFIKF-ILLCLILSSCKTTDHVPLVNTDHVFSN-------MKTIEKIYFDFGKAT 52
Query: 61 IRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
I +D +L + + + + +I GH D G+ ++ LG +RA AV ++ + S
Sbjct: 53 IGDSDKAILEKVIQKAQKDTNTNIVIVGHTDTRGTDEYNLELGEQRANAVKDFIIEHDKS 112
Query: 120 -ASRMKVTSYGKEMPSV------YGHDEDAYAKNRRAIVFLKGCRANT 160
+R+ V S GK P+V E A+AKNRR ++ L T
Sbjct: 113 LENRITVQSKGKSEPAVLVYSSNPEEAEHAHAKNRRVVITLTDNGNKT 160
>gi|47095252|ref|ZP_00232863.1| chemotaxis protein MotB [Listeria monocytogenes str. 1/2a F6854]
gi|258611605|ref|ZP_05234030.2| chemotaxis protein MotB [Listeria monocytogenes FSL N3-165]
gi|258612097|ref|ZP_05267393.2| chemotaxis protein MotB [Listeria monocytogenes F6900]
gi|293596468|ref|ZP_05261381.2| chemotaxis protein MotB [Listeria monocytogenes J2818]
gi|47016323|gb|EAL07245.1| chemotaxis protein MotB [Listeria monocytogenes str. 1/2a F6854]
gi|258601756|gb|EEW15081.1| chemotaxis protein MotB [Listeria monocytogenes FSL N3-165]
gi|258608279|gb|EEW20887.1| chemotaxis protein MotB [Listeria monocytogenes F6900]
gi|293589306|gb|EFF97640.1| chemotaxis protein MotB [Listeria monocytogenes J2818]
Length = 289
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 45/137 (32%), Gaps = 8/137 (5%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--LIEGHA 89
T + E ++ D + F + S + ++ +G + ++ GH
Sbjct: 148 GTKMTTKYSDEGLLITIRDDILFQSGSAELSAGKREIAKEIGELFAQGKGTMEGIVSGHT 207
Query: 90 DELGS----RNSSIALGLRRAYAVFNYFV--ARGISASRMKVTSYGKEMPSVYGHDEDAY 143
D + +S+ L + RA + ++ YG+ P
Sbjct: 208 DNVPISTSIYSSNWELSVARAVNFMEAIIQENSEVNPGEFSARGYGEFRPVAKNDIAANR 267
Query: 144 AKNRRAIVFLKGCRANT 160
KNRR + ++ +T
Sbjct: 268 EKNRRVEIMVRPINRDT 284
>gi|256424721|ref|YP_003125374.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
gi|256039629|gb|ACU63173.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
Length = 677
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 50/140 (35%), Gaps = 6/140 (4%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEK 78
K P + E + +++FD IRP + L + E
Sbjct: 535 ETVVNKPKEPVPAKGIGAPRKIELGNKFNPQNIYFDLGKADIRPDVAKELDKLIALMKEN 594
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ + H D N ++ L RRA + NYF+++GI R+ YG+
Sbjct: 595 ANWKVDMSFHTDSRSDDNYNMKLSQRRATSTLNYFLSKGIDKKRLTAKGYGETKLINRCA 654
Query: 139 -----DEDAYAKNRRAIVFL 153
E+ + NRRA +
Sbjct: 655 NGVNCTEEEHKANRRAEFTV 674
>gi|328542518|ref|YP_004302627.1| OmpA family protein [polymorphum gilvum SL003B-26A1]
gi|326412264|gb|ADZ69327.1| OmpA family protein [Polymorphum gilvum SL003B-26A1]
Length = 343
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 45/119 (37%), Gaps = 13/119 (10%)
Query: 48 VGDSVFFDTSSYSIRPA--------DIQVLSNLGSWLEKHDCDFLIEGHADELG-----S 94
V F + S I PA +L E+ + ++GH D
Sbjct: 222 FQSEVLFPSGSDEINPAGTVELGKLAEAILELEAQIPEEINWVLRVDGHTDSRPLSGTGR 281
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L RA +V Y + RG+ R+ +G+ P G +A A+NRR + L
Sbjct: 282 LRNNWELSSARAISVVRYLIDRGVDPKRLVAAGFGEFQPLEDGDSPEALARNRRIELKL 340
>gi|103488202|ref|YP_617763.1| OmpA/MotB [Sphingopyxis alaskensis RB2256]
gi|98978279|gb|ABF54430.1| OmpA/MotB [Sphingopyxis alaskensis RB2256]
Length = 294
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 54/150 (36%), Gaps = 4/150 (2%)
Query: 13 ITMMSISGIDNL-DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
M +G D + ++ + + + +Q++ +V FD + L
Sbjct: 141 TASMIHTGTDQRFAEQTAATEALRSRVGDIDQYNVKNTTNVNFDVGKAVLSAQAKADLCA 200
Query: 72 LGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS--RMKVTSY 128
+ E + L+ G+ D GS+ + L +RA AV N+ + T
Sbjct: 201 TAAAAEAMDNALLLVVGYTDSTGSQEFNQMLSEKRAGAVVNHLQQACGWKPYRMLTPTGM 260
Query: 129 GKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
+ P+ + A+NRR V + +
Sbjct: 261 AEADPAADNETPEGKAQNRRVAVNVLVSKG 290
>gi|310815074|ref|YP_003963038.1| OmpA domain protein [Ketogulonicigenium vulgare Y25]
gi|308753809|gb|ADO41738.1| OmpA domain protein [Ketogulonicigenium vulgare Y25]
Length = 708
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 42/125 (33%), Gaps = 2/125 (1%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGH 88
+ + + + + + FD S I + ++V+ + L D + G+
Sbjct: 485 AGLPTPGECVAQLGALNDENKIAFDPGSAQIAGSSLRVIDAMADVLRGCPVDLPIRVAGY 544
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D G ++ L RA AV R + S +G P E+ NRR
Sbjct: 545 TDSQGRAEMNLRLSQDRADAVLAALRMRRVPVSSFTAVGFGAADPIASNDSEEGREANRR 604
Query: 149 AIVFL 153
L
Sbjct: 605 IAFSL 609
>gi|229525621|ref|ZP_04415026.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae bv.
albensis VL426]
gi|297578614|ref|ZP_06940542.1| sodium-type flagellar protein MotY [Vibrio cholerae RC385]
gi|229339202|gb|EEO04219.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae bv.
albensis VL426]
gi|297536208|gb|EFH75041.1| sodium-type flagellar protein MotY [Vibrio cholerae RC385]
Length = 294
Score = 66.4 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Query: 58 SYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYAVFNYFVA 115
S + A + L+ + ++ + L+ + D + N+S L +RA + YF +
Sbjct: 192 SVELNKASQKRLAQIAEYVRYNQDIDLVLVSTYTDSTDTNNNSQNLSEQRAEVLREYFKS 251
Query: 116 RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G+ R++V YGK P KNRR ++ L
Sbjct: 252 IGLPEDRIQVQGYGKRRPIADNASPIGKDKNRRVVISL 289
>gi|241764618|ref|ZP_04762633.1| peptidoglycan-associated lipoprotein [Acidovorax delafieldii 2AN]
gi|241365939|gb|EER60569.1| peptidoglycan-associated lipoprotein [Acidovorax delafieldii 2AN]
Length = 178
Score = 66.0 bits (159), Expect = 1e-09, Method: Composition-based stats.
Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 2/143 (1%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFS-SSVGDSVFFDTSSYSIRPADIQVL 69
SAI +G ++ + + V S ++ V V+FD SY I+P ++
Sbjct: 33 SAIPTAGANGANSGNAGSNGVAGVNLGQSARDGAGPVGVSRLVYFDYDSYVIKPEFQSLI 92
Query: 70 SNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
+++ + ++EGH DE G R ++ALG +RA AV G+ S+++ S+
Sbjct: 93 EAHARFIKSSSNRKVVVEGHTDERGGREYNLALGQKRAEAVRRSLGLLGVPDSQVEAVSF 152
Query: 129 GKEMPSVYGHDEDAYAKNRRAIV 151
GKE +V G ED +A+NRRA +
Sbjct: 153 GKEKLAVQGTGEDVHAQNRRAEL 175
>gi|187479386|ref|YP_787411.1| peptidoglycan-associated lipoprotein [Bordetella avium 197N]
gi|115423973|emb|CAJ50526.1| peptidoglycan-associated lipoprotein [Bordetella avium 197N]
Length = 165
Score = 66.0 bits (159), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAY 107
SV+FD SY + ++ +L H IEG+ D+ G ++ALG RRA
Sbjct: 58 QRSVYFDFDSYGVSDQYRGLVETHARYLASHPQQRIKIEGNTDDRGGAEYNLALGQRRAD 117
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
AV G++ ++++ S+GKE P G E +A+NRRA +
Sbjct: 118 AVRRMMTLLGVADAQIEAISFGKEKPKATGSTEADFAENRRADIV 162
>gi|84688003|ref|ZP_01015866.1| OmpA family protein [Maritimibacter alkaliphilus HTCC2654]
gi|84663984|gb|EAQ10485.1| OmpA family protein [Rhodobacterales bacterium HTCC2654]
Length = 142
Score = 66.0 bits (159), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 32/104 (30%), Gaps = 4/104 (3%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
V F T SY + Q L + GH D S ++ L RA
Sbjct: 36 NTDVLFKTDSYQLTAQGQQWLRQFFASAGAFAYAV--YGHTDSRASDEYNMRLSQNRANT 93
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
V G R V +G+ P + KNRR +
Sbjct: 94 VAGVARQSGAVVDR--VVGFGERRPIAPNNSAANMQKNRRVEIV 135
>gi|127512450|ref|YP_001093647.1| OmpA/MotB domain-containing protein [Shewanella loihica PV-4]
gi|126637745|gb|ABO23388.1| OmpA/MotB domain protein [Shewanella loihica PV-4]
Length = 286
Score = 66.0 bits (159), Expect = 1e-09, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 42/103 (40%), Gaps = 2/103 (1%)
Query: 54 FDTSSYSIRPADIQVLSNLGSW--LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
++ + ++ + + + LI+ + D G R+ + + +RA +V
Sbjct: 180 YEFGGSELTRYSKAQIAKVQEYLSYDPEVELVLIDAYTDSFGGRSVNKKVSEKRANSVKQ 239
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
F++ GI R+ +G+ D A+NRR ++ L
Sbjct: 240 LFLSAGIPNERIHTYGHGERRHVASNDTIDERARNRRVVIRLS 282
>gi|222056198|ref|YP_002538560.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
gi|221565487|gb|ACM21459.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
Length = 349
Score = 66.0 bits (159), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 47/122 (38%), Gaps = 7/122 (5%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
+ ++ ++ + V F + S +I + L + S + + IEGH D +
Sbjct: 207 VTEYPDKLIVTMPEQVLFRSGSATINKGGKKALERVASILKKVKNNRIRIEGHTDSTPIK 266
Query: 96 NSS-----IALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
+ L RA +V + +G ++ + + YG P+ + + NRR
Sbjct: 267 SKHRYASNWDLSAARAASVVRHLQKKGAVNPEFLTLAGYGPYAPAAANNTSRGRSLNRRI 326
Query: 150 IV 151
+
Sbjct: 327 EI 328
>gi|259090543|gb|ACV91894.1| OprL [Pseudomonas fluorescens]
gi|259090577|gb|ACV91911.1| OprL [Pseudomonas fluorescens]
gi|259090579|gb|ACV91912.1| OprL [Pseudomonas fluorescens]
Length = 156
Score = 66.0 bits (159), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 65/123 (52%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+T + SL E+ + + +F+ S ++P ++ L L+ +
Sbjct: 34 AVDPNAGYGANTGAVDGSLSEEAALRAITTFYFEYDSSDLKPEAMRALDVHAKDLKANGA 93
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
++EG+ DE G+R ++ALG RRA AV Y V +G+S +++++ SYG+E P G+D
Sbjct: 94 RVVLEGNTDERGTREYNMALGERRAKAVQRYLVLQGVSPAQLELVSYGEERPVATGNDXQ 153
Query: 142 AYA 144
++A
Sbjct: 154 SWA 156
>gi|261868250|ref|YP_003256172.1| outer membrane protein A [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|261413582|gb|ACX82953.1| outer membrane protein A [Aggregatibacter actinomycetemcomitans
D11S-1]
Length = 356
Score = 66.0 bits (159), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 53/138 (38%), Gaps = 10/138 (7%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGH 88
+ ++ V F + +++P + L + + + ++ + + G+
Sbjct: 219 GQGPAPVIAPEVVNKVFNLNSDVTFAFNKANLKPQAQKTLDGISHEIAQVNNANVQVAGY 278
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY--- 143
D +GS + L RRA V NY V++G+S + T YGK P
Sbjct: 279 TDRIGSDAYNQKLSQRRAETVANYLVSKGVSQQAISATGYGKANPVTGNKCDTVKGRKAL 338
Query: 144 ----AKNRRAIVFLKGCR 157
A +RR + + G +
Sbjct: 339 IACLADDRRVEIAVNGTK 356
>gi|222087026|ref|YP_002545561.1| OmpA family protein [Agrobacterium radiobacter K84]
gi|221724474|gb|ACM27630.1| OmpA family protein [Agrobacterium radiobacter K84]
Length = 321
Score = 66.0 bits (159), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 40/102 (39%), Gaps = 5/102 (4%)
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG-----SRNSSIALGLRRAYAVFN 111
+ ++ + + ++GH D + + AL RA AV
Sbjct: 217 GQTEMAKLAAALIDLSKEIPPEINWVLRVDGHTDNVPLSGNGRYPDNWALSSARAIAVVK 276
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +A+G+ A R+ +G+ P G +A A NRR + L
Sbjct: 277 FLIAQGVPADRLVAAGFGEFQPIAPGDTPEARATNRRIELKL 318
>gi|218459695|ref|ZP_03499786.1| hypothetical protein RetlK5_09429 [Rhizobium etli Kim 5]
Length = 91
Score = 66.0 bits (159), Expect = 1e-09, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Query: 80 DCDFLIEGHADELG-----SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
+ ++GH D + + L RA +V + + +G+ A R+ +G+ P
Sbjct: 10 NWVLRVDGHTDNVPLGGTGRYRDNWELSSARATSVVKFLIGQGVPADRLVAAGFGEFQPI 69
Query: 135 VYGHDEDAYAKNRRAIVFL 153
G +A A NRR + L
Sbjct: 70 APGDTPEARATNRRIELKL 88
>gi|148979688|ref|ZP_01815660.1| outer membrane protein, putative [Vibrionales bacterium SWAT-3]
gi|145961665|gb|EDK26963.1| outer membrane protein, putative [Vibrionales bacterium SWAT-3]
Length = 202
Score = 66.0 bits (159), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/185 (18%), Positives = 78/185 (42%), Gaps = 30/185 (16%)
Query: 1 MQYSTIFIILSAITMMSISG--------------------------IDNLDTKISSPDTV 34
M+ + + + +++++ S ++ DT ++P
Sbjct: 1 MKITYLLLPALTMSLLACSSQQEEEYIETPEAEQISDLQDDDKDGVVNARDTCPATPPAS 60
Query: 35 LNESSLQEQFSSSV---GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHAD 90
L ++ + + ++ F SY + P ++ + +LE + I+G+A
Sbjct: 61 LVDNEGCGEIIRAEEVRQLNILFANDSYEVNPIFSDQITTMAEFLETYQSASIEIQGYAS 120
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
++GS ++ L +RA+ V + + GI +SR++V YG++ G D ++A NRR
Sbjct: 121 KVGSSEYNLELSKKRAHNVEDELLYNGIDSSRVRVVGYGEDRLESDGDDATSHALNRRVT 180
Query: 151 VFLKG 155
+ G
Sbjct: 181 ATVVG 185
>gi|22126613|ref|NP_670036.1| outer membrane protein A [Yersinia pestis KIM 10]
gi|45441153|ref|NP_992692.1| outer membrane protein A [Yersinia pestis biovar Microtus str.
91001]
gi|21959622|gb|AAM86287.1|AE013876_5 outer membrane porin A [Yersinia pestis KIM 10]
gi|45436013|gb|AAS61569.1| putative outer membrane porin A protein [Yersinia pestis biovar
Microtus str. 91001]
Length = 363
Score = 66.0 bits (159), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 60/145 (41%), Gaps = 12/145 (8%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDC 81
D + + + ++ V F + +++P Q L L + ++ D
Sbjct: 211 DAAAPIVAPTPAPAPIVDTKRFTLKSDVLFGFNKANLKPEGQQALDQLYAQLSSIDPKDG 270
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE- 140
++ G AD +G ++AL RRA +V +Y V++GI A ++ G+ P +
Sbjct: 271 SVVVLGFADRIGQPAPNLALSQRRADSVRDYLVSKGIPADKITARGEGQANPVTGNTCDN 330
Query: 141 --------DAYAKNRRAIVFLKGCR 157
+ A +RR + +KG +
Sbjct: 331 VKPRAALIECLAPDRRVEIEVKGYK 355
>gi|146293768|ref|YP_001184192.1| OmpA/MotB domain-containing protein [Shewanella putrefaciens CN-32]
gi|145565458|gb|ABP76393.1| OmpA/MotB domain protein [Shewanella putrefaciens CN-32]
Length = 196
Score = 66.0 bits (159), Expect = 1e-09, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 41/105 (39%), Gaps = 2/105 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
V+F+ + + + + L+ + +D ++ GH D +G+ + L L+RA V
Sbjct: 89 IVYFEFAIAEVDLSQWKSLALVKAFLEANNDVALILVGHTDIVGTPEFNYQLSLQRAENV 148
Query: 110 FNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V G + +R + G P + NRR +
Sbjct: 149 RRILVEDYGFNPNRFTIVGKGISEPVADNRSSEGRRLNRRVQFIV 193
>gi|222054709|ref|YP_002537071.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
gi|221563998|gb|ACM19970.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
Length = 474
Score = 66.0 bits (159), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F+T I+P ++ + +++++ LIEGH D G+ + + L RA V NY
Sbjct: 367 FETGRAEIQPRYHDEIAKVAEYMKRYPTTTALIEGHTDNTGTADFNQKLSQERAENVVNY 426
Query: 113 FVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
V + GI SR+ YG Y + KNRR
Sbjct: 427 LVEKLGIERSRLSAKGYGASRRLAYNTTAEGRKKNRRI 464
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRA 106
+ ++ FD IR D + ++ +G +++++ +IEGH D +G+ ++ L RRA
Sbjct: 237 ISLNLQFDIDKALIRAEDHREIARVGEFMQRYPDTTAVIEGHTDNVGTDEHNLDLSRRRA 296
Query: 107 YAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+V NY V + I SR+ T YG + P E KNRR +
Sbjct: 297 ESVTNYLVDKFGIDRSRLSSTGYGFKHPVADNGTEAGKQKNRRIDAII 344
>gi|71282605|ref|YP_268470.1| peptidoglycan-associated lipoprotein [Colwellia psychrerythraea
34H]
gi|71148345|gb|AAZ28818.1| peptidoglycan-associated lipoprotein [Colwellia psychrerythraea
34H]
Length = 184
Score = 66.0 bits (159), Expect = 1e-09, Method: Composition-based stats.
Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG------- 49
M+++ I I L + + S + D + + ++ +
Sbjct: 1 MRFNNIVKCLAIALPLTILSACSSNSDTDEQSQVDTNAQITKNAEDAQKAQEAVQVTAAK 60
Query: 50 -------------------DSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHA 89
++FD ++ +L +L + D LIEGHA
Sbjct: 61 RAAEIEEQKRQELAQLRSEHIIYFDFDVSNVNDQFSAILDAHAKFLNANSDVKVLIEGHA 120
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
DE G+ +IALG RRA +V Y G++A ++ V SYG+E P V E+A++KNRRA
Sbjct: 121 DERGTPEYNIALGERRAKSVVTYLENMGVAAGQLTVVSYGEEKPMVKDRSENAFSKNRRA 180
Query: 150 IVF 152
++
Sbjct: 181 VLV 183
>gi|317407132|gb|EFV87132.1| chemotaxis motB protein [Achromobacter xylosoxidans C54]
Length = 218
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 10/116 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLS----NLGSWLEKHDCDFLIEGHADELG------SR 95
+ SV F +S ++P +VL L ++L+ +D ++ G D+
Sbjct: 87 IGISGSVLFALNSDQLQPEGREVLKSLIEPLSAYLKANDEILMVSGFTDDQQVREGNRRF 146
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ L +RA V + G+ +S + ++G E P DE+ AKNRR +
Sbjct: 147 ADNWDLSAQRALTVTRALIDEGVPSSLVFAAAFGAEQPVASNADEEGRAKNRRVEI 202
>gi|288549451|ref|ZP_05967142.2| hypothetical protein ENTCAN_05522 [Enterobacter cancerogenus ATCC
35316]
gi|288319143|gb|EFC58081.1| outer membrane protein A [Enterobacter cancerogenus ATCC 35316]
Length = 358
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L L + L + D ++ G D +GS + L
Sbjct: 228 TLKSDVLFNFNKATLKPEGQQALDQLYTQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSE 287
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE---------DAYAKNRRAIVFLK 154
+RA +V +Y V++GI A+++ G+ P + D A +RR + +K
Sbjct: 288 KRAQSVVDYLVSKGIPANKISPRGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEVK 347
Query: 155 GCR 157
G +
Sbjct: 348 GIK 350
>gi|212709831|ref|ZP_03317959.1| hypothetical protein PROVALCAL_00879 [Providencia alcalifaciens DSM
30120]
gi|212687642|gb|EEB47170.1| hypothetical protein PROVALCAL_00879 [Providencia alcalifaciens DSM
30120]
Length = 357
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 12/122 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGS---WLEKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L+ L + ++ L+ G D +GS+N ++ L
Sbjct: 227 TLRSDVLFNFNKATLKPEGQQALNELYNELSNIDPTQGRVLVVGFTDRIGSQNYNLPLSQ 286
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE---------DAYAKNRRAIVFLK 154
+RA +V +Y VA+G+ AS + GKE P + + A +RR + ++
Sbjct: 287 KRAQSVVDYLVAKGVPASAIAAEGRGKEDPVTGNKCDAVKGRAALIECLAPDRRVEIEIQ 346
Query: 155 GC 156
G
Sbjct: 347 GT 348
>gi|283835685|ref|ZP_06355426.1| OmpA family protein [Citrobacter youngae ATCC 29220]
gi|291068900|gb|EFE07009.1| OmpA family protein [Citrobacter youngae ATCC 29220]
Length = 160
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 55/142 (38%), Gaps = 6/142 (4%)
Query: 18 ISGIDNL----DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
++G + + + + +S + D++ FD + Y +RP + + +
Sbjct: 16 VAGCQAPQGKFTPEQIAAMKSYGFTEVSGDWSLGLSDNILFDKNDYKLRPESEKQIQEMA 75
Query: 74 SWLEKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKE 131
S L + ++GH D G + + AL L+RA V + + + GK+
Sbjct: 76 SKLAATGLNHARLDGHTDNYGEDSYNEALSLKRANVVADAWAQGANIPRTNLTTQGLGKK 135
Query: 132 MPSVYGHDEDAYAKNRRAIVFL 153
P A+NRR V +
Sbjct: 136 YPIASNQTSKGRAENRRVAVVI 157
>gi|261344255|ref|ZP_05971899.1| outer membrane protein A [Providencia rustigianii DSM 4541]
gi|282567857|gb|EFB73392.1| outer membrane protein A [Providencia rustigianii DSM 4541]
Length = 353
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 58/122 (47%), Gaps = 12/122 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGS---WLEKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + S++P Q L+ L + ++ L+ G D +GS+N ++ L
Sbjct: 223 TLRSDVLFNFNKASLKPEGQQALNELYNELSNIDPTQGRVLVVGFTDRIGSQNYNLPLSQ 282
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE---------DAYAKNRRAIVFLK 154
+RA +V +Y VA+G+ AS + GKE P + + A +RR + ++
Sbjct: 283 KRAQSVVDYLVAKGVPASAIAAEGRGKEDPVTGNKCDAVKGRAALIECLAPDRRVEIEIQ 342
Query: 155 GC 156
G
Sbjct: 343 GT 344
>gi|149198154|ref|ZP_01875201.1| peptidoglycan-associated lipoprotein [Lentisphaera araneosa
HTCC2155]
gi|149138756|gb|EDM27162.1| peptidoglycan-associated lipoprotein [Lentisphaera araneosa
HTCC2155]
Length = 197
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
+ V+F S ++R A+ + + + +I GH DE GS + L +RA +
Sbjct: 88 EPVYFAFDSAAVRSAEDAKIQAIAEFLTSNPSFTLVIGGHCDERGSDEYNRTLSEKRALS 147
Query: 109 VFNYFVARGIS-ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V ++ R++ +YG+E P+V G D +YAKNRRA +
Sbjct: 148 VKESLLSASPDLEMRIETVAYGEEKPAVVGADSQSYAKNRRAEFEV 193
>gi|153829514|ref|ZP_01982181.1| sodium-type flagellar protein MotY [Vibrio cholerae 623-39]
gi|148874974|gb|EDL73109.1| sodium-type flagellar protein MotY [Vibrio cholerae 623-39]
Length = 294
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Query: 58 SYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYAVFNYFVA 115
S + A + L+ + ++ + L+ + D + N+S L +RA + YF +
Sbjct: 192 SVELNKASQKRLAQIAEYVRYNQDIDLVLVSTYTDSTDTNNNSQNLSEQRAEVLREYFKS 251
Query: 116 RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G+ R++V YGK P KNRR ++ L
Sbjct: 252 IGLPEDRIQVQGYGKRRPIADNASPIGKDKNRRVVISL 289
>gi|309244383|gb|ADO52196.1| OprL [Pseudomonas sp. AF23]
gi|309244387|gb|ADO52198.1| OprL [Pseudomonas sp. AF33]
gi|309244389|gb|ADO52199.1| OprL [Pseudomonas sp. AF70]
gi|309244391|gb|ADO52200.1| OprL [Pseudomonas sp. AF76]
gi|309244393|gb|ADO52201.1| OprL [Pseudomonas sp. BcB122]
gi|309244395|gb|ADO52202.1| OprL [Pseudomonas sp. BcB153]
Length = 156
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 64/123 (52%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+T + SL E+ + + +F+ S ++P ++ L L+ +
Sbjct: 34 AVDPNAGYGANTGAVDGSLSEEAALRAITTFYFEYDSSDLKPEAMRALDVHAKDLKANGN 93
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
+EG+ DE G+R ++ALG RRA AV Y V +G+S +++++ SYG+E P G+D
Sbjct: 94 RVTLEGNTDERGTREYNMALGERRAKAVQRYLVLQGVSPAQLELVSYGEERPVATGNDXQ 153
Query: 142 AYA 144
++A
Sbjct: 154 SWA 156
>gi|229591316|ref|YP_002873435.1| putative phosphate-related ABC transporter exported protein
[Pseudomonas fluorescens SBW25]
gi|229363182|emb|CAY50235.1| putative phosphate-related ABC transport system, exported protein
[Pseudomonas fluorescens SBW25]
Length = 443
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 56/148 (37%), Gaps = 7/148 (4%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
+ A + + +D + + ++ +E +V F+ S S+ Q
Sbjct: 299 AIVAASGFIAQQVQAMDVEPRASMPEGYQTIAREAQRLTVNFR--FEEGSASLDNKARQD 356
Query: 69 LSNLGSWLEKHDC---DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
L + ++++ HD + G D + L RA AV V G+ ++
Sbjct: 357 LQRVVAYIKSHDKLDKQVTLVGFGDAKNDPQRAALLSKLRAMAVRRELVKSGVVLR--EI 414
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+G +MP ++ KNRR V++
Sbjct: 415 RGFGAQMPVAANTADEGRIKNRRVEVWV 442
>gi|255037115|ref|YP_003087736.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
18053]
gi|254949871|gb|ACT94571.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
Length = 484
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRR 105
S + +V FDT ++P ++L N+ + + K+ C + GH D S +IAL RR
Sbjct: 373 SEIFANVTFDTDKNVLKPEFQELLKNVAALMNKNGCRLQLAGHTDRRASDRYNIALSKRR 432
Query: 106 AYAVFNYFVARG--ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV N+ + S++ V +G P KNRR + L
Sbjct: 433 VEAVKNFLINEAGLQDPSKVIVDYFGSFKPIADSATRPGLQKNRRVELKL 482
>gi|158422120|ref|YP_001523412.1| flagellar motor protein [Azorhizobium caulinodans ORS 571]
gi|158329009|dbj|BAF86494.1| flagellar motor protein [Azorhizobium caulinodans ORS 571]
Length = 339
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 46/118 (38%), Gaps = 12/118 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLG--------SWLEKHDCDFLIEGHADELGS----R 95
VFFD S + RP + L L + I+GH D
Sbjct: 219 FQSEVFFDRGSATPRPEALAELDKLASAILELERQIPPDINWALRIDGHTDSRPISTPQF 278
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA AV Y +++G+ + +G+ P G +++ A+NRR + L
Sbjct: 279 PSNWELSAARAIAVAQYLISKGVQPRHLIAAGFGEYQPIDTGTSDESMARNRRIELKL 336
>gi|147674163|ref|YP_001216480.1| sodium-type flagellar protein MotY [Vibrio cholerae O395]
gi|229529898|ref|ZP_04419288.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae
12129(1)]
gi|146316046|gb|ABQ20585.1| sodium-type flagellar protein MotY [Vibrio cholerae O395]
gi|227012825|gb|ACP09035.1| sodium-type flagellar protein MotY [Vibrio cholerae O395]
gi|229333672|gb|EEN99158.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae
12129(1)]
Length = 294
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Query: 58 SYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYAVFNYFVA 115
S + A + L+ + ++ + L+ + D + N+S L +RA + YF +
Sbjct: 192 SVELNKASQKRLAQIAEYVRYNQDIDLVLVSTYTDSTDTNNNSQNLSEQRAEVLREYFKS 251
Query: 116 RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G+ R++V YGK P KNRR ++ L
Sbjct: 252 IGLPEDRIQVQGYGKRRPIADNASPIGKDKNRRVVISL 289
>gi|15641023|ref|NP_230654.1| sodium-type flagellar protein MotY [Vibrio cholerae O1 biovar El
Tor str. N16961]
gi|227081182|ref|YP_002809733.1| sodium-type flagellar protein MotY [Vibrio cholerae M66-2]
gi|229505393|ref|ZP_04394903.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae BX
330286]
gi|229510937|ref|ZP_04400416.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae B33]
gi|229518058|ref|ZP_04407502.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae RC9]
gi|229608412|ref|YP_002879060.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae
MJ-1236]
gi|254848138|ref|ZP_05237488.1| sodium-type flagellar protein MotY [Vibrio cholerae MO10]
gi|255744790|ref|ZP_05418741.1| sodium-type flagellar protein MotY precursor [Vibrio cholera CIRS
101]
gi|298498879|ref|ZP_07008686.1| sodium-type flagellar protein MotY [Vibrio cholerae MAK 757]
gi|9655471|gb|AAF94169.1| sodium-type flagellar protein MotY [Vibrio cholerae O1 biovar El
Tor str. N16961]
gi|227009070|gb|ACP05282.1| sodium-type flagellar protein MotY [Vibrio cholerae M66-2]
gi|229344773|gb|EEO09747.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae RC9]
gi|229350902|gb|EEO15843.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae B33]
gi|229357616|gb|EEO22533.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae BX
330286]
gi|229371067|gb|ACQ61490.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae
MJ-1236]
gi|254843843|gb|EET22257.1| sodium-type flagellar protein MotY [Vibrio cholerae MO10]
gi|255737821|gb|EET93215.1| sodium-type flagellar protein MotY precursor [Vibrio cholera CIRS
101]
gi|297543212|gb|EFH79262.1| sodium-type flagellar protein MotY [Vibrio cholerae MAK 757]
Length = 294
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Query: 58 SYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYAVFNYFVA 115
S + A + L+ + ++ + L+ + D + N+S L +RA + YF +
Sbjct: 192 SVELNKASQKRLAQIAEYVRYNQDIDLVLVSTYTDSTDTNNNSQNLSEQRAEVLREYFKS 251
Query: 116 RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G+ R++V YGK P KNRR ++ L
Sbjct: 252 IGLPEDRIQVQGYGKRRPIADNASPIGKDKNRRVVISL 289
>gi|224023377|ref|ZP_03641743.1| hypothetical protein BACCOPRO_00070 [Bacteroides coprophilus DSM
18228]
gi|224016599|gb|EEF74611.1| hypothetical protein BACCOPRO_00070 [Bacteroides coprophilus DSM
18228]
Length = 239
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 56/144 (38%), Gaps = 12/144 (8%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW--L 76
+ + + + V + + LQ + + F TSS ++ A LS +
Sbjct: 79 AAQQAQQIEGAEVEQVTDNNGLQA-VKVTFDSGILFTTSSATLSSAAKASLSKFANNVLN 137
Query: 77 EKHDCDFLIEGHADEL--------GSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTS 127
+ D D I G+ D S ++ L RA +V +Y + G+SAS++ V
Sbjct: 138 QNRDMDVAIYGYTDNQGWRNSTKEQSVQKNLNLSQERAQSVSSYLLGCGVSASQIKSVEG 197
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIV 151
G+ P E +NRR V
Sbjct: 198 MGESNPVADNSTEAGRQENRRVEV 221
>gi|109897648|ref|YP_660903.1| flagellar motor protein MotB [Pseudoalteromonas atlantica T6c]
gi|109699929|gb|ABG39849.1| OmpA/MotB [Pseudoalteromonas atlantica T6c]
Length = 305
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 52/132 (39%), Gaps = 5/132 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
D + SL +Q + ++ F S ++P +L +G+ L D I GH+D
Sbjct: 164 DGAIEMESLGQQLIIRIRENGSFSAGSAFLQPQFKPILRKIGTLLADMPGDIEISGHSDS 223
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
L S+ L +RA AV RM V P + D A ++N
Sbjct: 224 LVISNELYRSNWDLSAQRAVAVAEELRKAPGFDEGRMAVIGKADTAPLLGEDDAQARSRN 283
Query: 147 RRAIVFLKGCRA 158
RR + +K +A
Sbjct: 284 RRVEIAIKQGKA 295
>gi|326317618|ref|YP_004235290.1| OmpA/MotB domain-containing protein [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323374454|gb|ADX46723.1| OmpA/MotB domain protein [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 188
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 43/117 (36%), Gaps = 1/117 (0%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQ-VLSNLGSWLEKHDCDFLIEGHADELGSRN 96
+ + + FD S + VL + + +EGH DE G+R
Sbjct: 69 EPTDAGWELQMSGKLLFDFDSVELNAESHDGVLRMGRALADVGIDALRVEGHTDEQGARA 128
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L LRRA AV G+ A + G P V G + +NRR + +
Sbjct: 129 YNERLSLRRAQAVARVLAEAGLPADHIGTVGLGASRPVVQGTSAASRRENRRVAIIV 185
>gi|323697552|ref|ZP_08109464.1| OmpA/MotB domain protein [Desulfovibrio sp. ND132]
gi|323457484|gb|EGB13349.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans ND132]
Length = 248
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 43/113 (38%), Gaps = 6/113 (5%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADE-----LGSRNSSIAL 101
V V F + + P Q++++L + + D + I G+ D + +
Sbjct: 130 VPGDVMFQSGQVELTPKGAQLVADLKDFFIKHKDQNIKIVGYTDNVRPGGNSRFKDNWEI 189
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RA V + G+ ++R+ T P E+ AKNRR L+
Sbjct: 190 SAMRAVNVLRELLKLGLESTRLTATGLAYLNPLYPNTSEEYRAKNRRVEFILE 242
>gi|189402632|ref|ZP_02783681.2| OmpA family protein [Escherichia coli O157:H7 str. EC4401]
gi|189406165|ref|ZP_02826729.2| OmpA family protein [Escherichia coli O157:H7 str. EC508]
gi|189354554|gb|EDU72973.1| OmpA family protein [Escherichia coli O157:H7 str. EC4401]
gi|189376183|gb|EDU94599.1| OmpA family protein [Escherichia coli O157:H7 str. EC508]
Length = 127
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 2/123 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF-LIEGHADE 91
+ +S + D++ F + Y + P Q + + + L ++GH D
Sbjct: 2 QSYGFTESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDN 61
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + + L L+RA V + + G + GK+ P A+NRR
Sbjct: 62 YGEDSYNEGLSLKRANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVA 121
Query: 151 VFL 153
V +
Sbjct: 122 VVI 124
>gi|90579839|ref|ZP_01235647.1| flagellar motor protein [Vibrio angustum S14]
gi|90438724|gb|EAS63907.1| flagellar motor protein [Vibrio angustum S14]
Length = 307
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 50/128 (39%), Gaps = 5/128 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHA-- 89
D ++ +L +Q + + F S ++P ++ + ++ + GH
Sbjct: 163 DKIIEIENLGQQLVIRIREKGSFPEGSAFLQPKFKPLVRQVAMLVKDVPGIIRVTGHTAS 222
Query: 90 DELGS--RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
D+L S S+ L +RA +V G ++M+V P ++ AKN
Sbjct: 223 DKLDSELYRSNWDLSAQRAVSVAQEMEKVEGFDHTKMRVVGLADTQPIADNKTQEGKAKN 282
Query: 147 RRAIVFLK 154
RR + +
Sbjct: 283 RRVEISIM 290
>gi|237807905|ref|YP_002892345.1| OmpA domain-containing protein transmembrane region-containing
protein [Tolumonas auensis DSM 9187]
gi|237500166|gb|ACQ92759.1| OmpA domain protein transmembrane region-containing protein
[Tolumonas auensis DSM 9187]
Length = 341
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPA---DIQVLSNLGSWLEKHDCDFLIEGHADELGSRN 96
++E + ++ V FD + +++PA + L N LE D + ++ G+ D +GS
Sbjct: 207 VEETKNFTLTSDVLFDFNKSTLKPAGVTALSQLYNQIQTLEMDDKNIVVYGYTDRIGSDG 266
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK---------NR 147
++ L RA V ++ +G+SA+R+ G+ P AK +R
Sbjct: 267 YNLKLSQDRAKTVSDFLTTKGLSATRITAVGRGEADPVSPASCNAIKAKKDLIVCLAPDR 326
Query: 148 RAIVFLKGCRANT 160
R + +KG + T
Sbjct: 327 RVNIEVKGTKKVT 339
>gi|77359154|ref|YP_338729.1| hypothetical protein PSHAa0183 [Pseudoalteromonas haloplanktis
TAC125]
gi|76874065|emb|CAI85286.1| putative outer membrane protein; signal peptide [Pseudoalteromonas
haloplanktis TAC125]
Length = 354
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 57/139 (41%), Gaps = 1/139 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
D + +L E +V V F ++ ++ + + + +L+++
Sbjct: 210 ADDQCPNTPMTDAVDGTGCTLYEDKEVTVSLLVTFPNNTSAVSTQYLNDIDKVAEFLKEY 269
Query: 80 D-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
L+EGH +G + + L +RA AV VA G++ R+ G+E +
Sbjct: 270 PDTTVLLEGHTSSVGKASYNKWLSKKRADAVAKKLVADGVAEDRITTVGLGEERLKNEAN 329
Query: 139 DEDAYAKNRRAIVFLKGCR 157
+ A+ +NRR +K +
Sbjct: 330 TKAAHEENRRVEAHIKTIK 348
>gi|16802728|ref|NP_464213.1| hypothetical protein lmo0686 [Listeria monocytogenes EGD-e]
gi|224498768|ref|ZP_03667117.1| hypothetical protein LmonF1_03321 [Listeria monocytogenes Finland
1988]
gi|224502009|ref|ZP_03670316.1| hypothetical protein LmonFR_05752 [Listeria monocytogenes FSL
R2-561]
gi|254830323|ref|ZP_05234978.1| hypothetical protein Lmon1_03142 [Listeria monocytogenes 10403S]
gi|254900078|ref|ZP_05260002.1| hypothetical protein LmonJ_09695 [Listeria monocytogenes J0161]
gi|255026595|ref|ZP_05298581.1| hypothetical protein LmonocytFSL_10100 [Listeria monocytogenes FSL
J2-003]
gi|284801016|ref|YP_003412881.1| hypothetical protein LM5578_0765 [Listeria monocytogenes 08-5578]
gi|284994158|ref|YP_003415926.1| hypothetical protein LM5923_0720 [Listeria monocytogenes 08-5923]
gi|5305456|gb|AAD41660.1| motility protein [Listeria monocytogenes]
gi|16410075|emb|CAC98764.1| motB [Listeria monocytogenes EGD-e]
gi|284056578|gb|ADB67519.1| hypothetical protein LM5578_0765 [Listeria monocytogenes 08-5578]
gi|284059625|gb|ADB70564.1| hypothetical protein LM5923_0720 [Listeria monocytogenes 08-5923]
Length = 275
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 45/137 (32%), Gaps = 8/137 (5%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--LIEGHA 89
T + E ++ D + F + S + ++ +G + ++ GH
Sbjct: 134 GTKMTTKYSDEGLLITIRDDILFQSGSAELSAGKREIAKEIGELFAQGKGTMEGIVSGHT 193
Query: 90 DELGS----RNSSIALGLRRAYAVFNYFV--ARGISASRMKVTSYGKEMPSVYGHDEDAY 143
D + +S+ L + RA + ++ YG+ P
Sbjct: 194 DNVPISTSIYSSNWELSVARAVNFMEAIIQENSEVNPGEFSARGYGEFRPVAKNDIAANR 253
Query: 144 AKNRRAIVFLKGCRANT 160
KNRR + ++ +T
Sbjct: 254 EKNRRVEIMVRPINRDT 270
>gi|197119091|ref|YP_002139518.1| OmpA family outer membrane protein [Geobacter bemidjiensis Bem]
gi|197088451|gb|ACH39722.1| OmpA family outer membrane protein, DUF11 domain-containing protein
[Geobacter bemidjiensis Bem]
Length = 2000
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/102 (25%), Positives = 37/102 (36%), Gaps = 2/102 (1%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
F + +L L + ++EGH D +GS ++AL RR A +
Sbjct: 1730 AFVFDRSELTLEAKHLLKGAARVLRARPQEKVIVEGHTDGIGSVEYNMALSQRRCDAAAD 1789
Query: 112 YFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
Y V A SR+ YGK P NRR +
Sbjct: 1790 YLVREEGIAGSRLLRRWYGKSRPVADNVTTPGRRLNRRVELK 1831
>gi|126730858|ref|ZP_01746667.1| OmpA domain protein [Sagittula stellata E-37]
gi|126708574|gb|EBA07631.1| OmpA domain protein [Sagittula stellata E-37]
Length = 318
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 49/132 (37%), Gaps = 3/132 (2%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCD 82
T ++ D ++L+ ++ D VF + S + DI L L + +
Sbjct: 184 ARTSGAAIDPGDIPAALERDGHVTLSDLVFR-SGSTDLGGDDIASLDALAQYLSDNPTRR 242
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDED 141
L GH D GS ++ + LRRA A Y +R A R+ G P +
Sbjct: 243 ILFVGHTDATGSLEANRGVSLRRAQAAVAYLRSRHDTDAGRIGAEGAGYLAPVASNLTAE 302
Query: 142 AYAKNRRAIVFL 153
NRR L
Sbjct: 303 GREANRRVEAVL 314
>gi|24217389|ref|NP_714872.1| outer membrane protein OmpA [Leptospira interrogans serovar Lai
str. 56601]
gi|45655825|ref|YP_003634.1| peptidoglycan-associated cytoplasmic membrane protein [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
gi|24202471|gb|AAN51887.1| OmpA-family protein [Leptospira interrogans serovar Lai str. 56601]
gi|45602796|gb|AAS72271.1| peptidoglycan-associated cytoplasmic membrane protein [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
Length = 383
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 50/128 (39%), Gaps = 1/128 (0%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLI 85
+ E S QF + + F+ +S I L+ L W+++ +
Sbjct: 254 SSLTNQNSTEEFSSNPQFREIESNVIRFEKNSIQIHKESRPSLNRLARWMKQDSSIRVKV 313
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
GH GS +++ + L RA V NY GIS R ++ G +P E+
Sbjct: 314 IGHTSLEGSEDANQKVSLLRAQTVRNYIAGNGISKDRFEIIPKGASVPIGDNSKEEGKEM 373
Query: 146 NRRAIVFL 153
NRR + +
Sbjct: 374 NRRVELRI 381
>gi|323697842|ref|ZP_08109754.1| OmpA/MotB domain protein [Desulfovibrio sp. ND132]
gi|323457774|gb|EGB13639.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans ND132]
Length = 250
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 48/124 (38%), Gaps = 5/124 (4%)
Query: 34 VLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD--- 90
+ SS + + + FD S + Q L + +++ D + +I GH D
Sbjct: 118 MAKVSSDKSGVMLRLSSQLLFDKGSVELTAEAKQALQMVIDSMKQTDFNLVIRGHTDGET 177
Query: 91 -ELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
E S+ +L RA + Y + +RMK YG P + G E+ NRR
Sbjct: 178 PESVQYGSNWSLSAARAASCLRYIIEHSDIPATRMKAVGYGGSKPLLPGTSEENRQANRR 237
Query: 149 AIVF 152
F
Sbjct: 238 VEFF 241
>gi|317402473|gb|EFV83041.1| peptidoglycan-associated lipoprotein [Achromobacter xylosoxidans
C54]
Length = 166
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
SV+FD SY++ ++ + IEG+ DE G ++ALG RRA
Sbjct: 59 QRSVYFDFDSYTVSDQYRGLVETHARYLASHQQQKIKIEGNTDERGGAEYNLALGQRRAD 118
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
AV G+S ++++ S+GKE P G E +A+NRRA +
Sbjct: 119 AVRRMMTLLGVSDNQIETISFGKEKPKATGSSEADFAENRRADIV 163
>gi|295134908|ref|YP_003585584.1| OmpA/MotB family outer hypothetical protein [Zunongwangia profunda
SM-A87]
gi|294982923|gb|ADF53388.1| OmpA/MotB family outer membrane protein [Zunongwangia profunda
SM-A87]
Length = 281
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 58/148 (39%), Gaps = 8/148 (5%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
++T+ ++ + ++ D +N S+ D + FD+ Y++ +VL
Sbjct: 113 SVTLALVTSLKGAIGNMNDDDIEINVEKGVVY--VSISDKLLFDSGRYNVTNQAREVLGK 170
Query: 72 LGSWLEKHD-CDFLIEGHAD----ELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKV 125
+ + ++ +F++EGH D + L ++RA +V + RM
Sbjct: 171 VATVIKNKPDIEFMVEGHTDDKSISTSMFQDNWDLSVKRATSVVRILQDEFGVDPKRMTA 230
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
MP + AKNRR + +
Sbjct: 231 AGRSYYMPVASNATAEGRAKNRRTRIVV 258
>gi|258646396|ref|ZP_05733865.1| OmpA family protein [Dialister invisus DSM 15470]
gi|260403798|gb|EEW97345.1| OmpA family protein [Dialister invisus DSM 15470]
Length = 357
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 47/131 (35%), Gaps = 4/131 (3%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
DT +P + + S + F S + R L ++
Sbjct: 228 KEADTVTITPAEEETAVPENDYYFIS----IHFGNDSDTPRADQTANLDAFVKAAKETGH 283
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
F + G D GS+ + L +RR V +Y VA G+ S + G+E P E
Sbjct: 284 TFKLVGRTDSNGSKEYNDDLAIRRVKKVADYAVAHGVDLSHLVGMYKGEEAPVDTNDTEA 343
Query: 142 AYAKNRRAIVF 152
A NRR +F
Sbjct: 344 GRANNRRVDIF 354
>gi|227111637|ref|ZP_03825293.1| outer membrane protein A [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 361
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/161 (21%), Positives = 68/161 (42%), Gaps = 12/161 (7%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
+L ++ + G D+ + +P + + E ++ V F+ + +++ Q
Sbjct: 193 LLMSVGLSYRFGQDDRVAPVVAPAPTPAPAPVVETKRFTLKSDVLFNFNKATLKAEGQQS 252
Query: 69 LSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
L L + L + D ++ G D LGS + L +RA +V +Y VA+GI A+++
Sbjct: 253 LDQLYTQLSSLDPKDGSVVVLGFTDRLGSEQYNQGLSEKRAQSVVDYLVAKGIPANKVSA 312
Query: 126 TSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLKGCR 157
GK P + A +RR + +KG +
Sbjct: 313 RGLGKSQPVTGSTCDNVKPRAALIDCLAPDRRVEIEVKGIK 353
>gi|146275632|ref|YP_001165792.1| OmpA/MotB domain-containing protein [Novosphingobium
aromaticivorans DSM 12444]
gi|145322323|gb|ABP64266.1| OmpA/MotB domain protein [Novosphingobium aromaticivorans DSM
12444]
Length = 291
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 54/142 (38%), Gaps = 3/142 (2%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ ++ + + ++++ +V+FDT Y++ P L N + E
Sbjct: 146 TAQGFAEQTAATEALRGRMGDIDKYNIKSTTNVYFDTGKYNLSPQAKAELCNAATTAEGI 205
Query: 80 DCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS--RMKVTSYGKEMPSVY 136
D + + G+ D +G + L +RA +V NY + T K P
Sbjct: 206 DNALMLVVGYTDSVGDDEYNQTLSEKRANSVINYLQQACRWKPYRMLTPTGMAKADPLAS 265
Query: 137 GHDEDAYAKNRRAIVFLKGCRA 158
E+ A+NRR V + +
Sbjct: 266 NDTEEGKAQNRRVAVNVLVSKG 287
>gi|325107821|ref|YP_004268889.1| OmpA/MotB domain protein [Planctomyces brasiliensis DSM 5305]
gi|324968089|gb|ADY58867.1| OmpA/MotB domain protein [Planctomyces brasiliensis DSM 5305]
Length = 280
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 9/112 (8%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELG------SRNSSIAL 101
+ F + S +R +L +L + + D L+ GH D+ + ++ L
Sbjct: 153 DILFSSGSAELRDTAKPLLRDLAAIMNDGDARGLNLLVVGHTDDQPIASARGTHPTNWHL 212
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA +V GIS RM Y P V ++ + +NRR +F+
Sbjct: 213 STNRANSVVLALKNSGISEHRMGAAGYSLNQPLVPNTNDHSRQRNRRVEIFV 264
>gi|258647767|ref|ZP_05735236.1| OmpA family protein [Prevotella tannerae ATCC 51259]
gi|260852625|gb|EEX72494.1| OmpA family protein [Prevotella tannerae ATCC 51259]
Length = 288
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 48/114 (42%), Gaps = 6/114 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHAD----ELGSRNSSIA 100
S+ D++ + + SY I + LS + ++ + D L+EG+ D + ++
Sbjct: 154 ISLADNMLYKSGSYEINSRAKETLSKIAKIIKDYRDYDVLVEGNTDPVPITRTNIRNNWD 213
Query: 101 LGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V G++ +R+ G+ P E +NRR + +
Sbjct: 214 LSCLRASSVVLALQNDYGVNPARLTAAGRGEYNPVTTNETEVGKQRNRRTQIII 267
>gi|116329778|ref|YP_799497.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
L550]
gi|116332660|ref|YP_802377.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
JB197]
gi|116122671|gb|ABJ80564.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
L550]
gi|116127527|gb|ABJ77619.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
JB197]
Length = 363
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 49/120 (40%), Gaps = 1/120 (0%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSR 95
E S +F + F+ +S IR L+ L W+++ I GH G+
Sbjct: 244 ELSSNPKFREIESKVIHFEKNSIQIRKEAKPGLNRLSRWMKEDSSIRVKIFGHTSLEGTE 303
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
++ + L RA V +Y GIS R +V G +P E+ NRR + ++
Sbjct: 304 AANQRVSLLRAETVRDYLAGNGISKDRFEVIPKGASVPIGDNSKEEGKEMNRRVELRIRN 363
>gi|315179667|gb|ADT86581.1| OmpA family protein [Vibrio furnissii NCTC 11218]
Length = 344
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW--LEKHDCDFLIEGHADELGSRNSSIAL 101
F+ + S++F + S+ A L +L S+ +K LI+GH D +GSR +++++
Sbjct: 212 FAEARDTSLYFASGQQSLSGAQQHTLRDLISYVVRDKRATHLLIDGHTDNVGSRLANLSV 271
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA V G++A ++++ ++G P E A+NRR ++ L
Sbjct: 272 SRSRAEQVAAVLETLGVAADKIQIRAHGSRYPVASNATESGRAQNRRVVIRL 323
>gi|254463240|ref|ZP_05076656.1| OmpA family domain protein [Rhodobacterales bacterium HTCC2083]
gi|206679829|gb|EDZ44316.1| OmpA family domain protein [Rhodobacteraceae bacterium HTCC2083]
Length = 316
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 48/143 (33%), Gaps = 2/143 (1%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL 72
I++ S I T T ++ + + + F T S ++ + L NL
Sbjct: 170 ISVFKGSEIIASTTGSGQAVTTKGAAATLDVSGRVILSDLMFQTGSSNLGEGSFKSLQNL 229
Query: 73 GSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGK 130
+L + + GH D GS +IAL RRA +V + ++ G
Sbjct: 230 ADYLRSNSTRKVALVGHTDAEGSLEGNIALSKRRASSVRKRLIEAYGVPTDQLSADGVGF 289
Query: 131 EMPSVYGHDEDAYAKNRRAIVFL 153
P NRR L
Sbjct: 290 LSPVASNLSAAGRTANRRVEAVL 312
>gi|110637015|ref|YP_677222.1| outer membrane protein A [Cytophaga hutchinsonii ATCC 33406]
gi|110279696|gb|ABG57882.1| outer membrane protein A [Cytophaga hutchinsonii ATCC 33406]
Length = 734
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/109 (30%), Positives = 46/109 (42%), Gaps = 5/109 (4%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
D +++D + +IR L L + E + H D GS ++ L RA A
Sbjct: 623 DDIYYDYNKATIRQDAKPALDQLMNLLTENPTMKIQLNSHTDCRGSDVYNMKLSQNRARA 682
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGH----DEDAYAKNRRAIVFL 153
V Y V RGISA R+K YG+ +P E Y NRR +
Sbjct: 683 VVTYLVERGISADRLKFKGYGETLPVTNCACTECTEQQYQDNRRTEFQI 731
>gi|73853300|ref|YP_308796.1| OmpA-family lipoprotein [Escherichia coli]
gi|73476884|gb|AAZ76499.1| OmpA-family lipoprotein [Escherichia coli]
Length = 267
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 54/132 (40%), Gaps = 8/132 (6%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
++P + + GD V F+ S+ + L + + + D D IE
Sbjct: 133 SSATPGENTVKEDSVSHKETLSGD-VLFNFDSWRLTDKANDELERIATKFSQVD-DVRIE 190
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD------E 140
G D LGS+ + L +RA +V +F++RG A R++ T G + P +
Sbjct: 191 GFTDPLGSKEYNRILSEKRAESVKEWFISRGFKAERIQATGRGADAPVALCPGMVGDGLK 250
Query: 141 DAYAKNRRAIVF 152
+ NRR +
Sbjct: 251 ECLRPNRRVEIT 262
>gi|68171722|ref|ZP_00545076.1| OmpA/MotB [Ehrlichia chaffeensis str. Sapulpa]
gi|67998855|gb|EAM85553.1| OmpA/MotB [Ehrlichia chaffeensis str. Sapulpa]
Length = 175
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/162 (22%), Positives = 68/162 (41%), Gaps = 18/162 (11%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKI-SSPDTVLNESSLQEQFSSSVGDSVFFDTSSY 59
M++ +FI + + +S D + D V + + E ++F
Sbjct: 1 MKHKLVFIKFM-LLCLILSSCKTTDHVPLVNVDHVFSNTKTIE--------KIYFGFGKA 51
Query: 60 SIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNY-FVARG 117
+I +D +L + E++ + +I GH D G+ ++ LG +RA AV ++
Sbjct: 52 TIEDSDKTILEKVMQKAEEYPDTNIIIVGHTDTRGTDEYNLELGKQRANAVKDFILERNK 111
Query: 118 ISASRMKVTSYGKEMP---SVYGHDEDA---YAKNRRAIVFL 153
R+ + S GK P + E+A + KNRR ++ L
Sbjct: 112 SLEDRIIIESKGKSEPAVLVYSNNPEEAEYAHTKNRRVVITL 153
>gi|319781002|ref|YP_004140478.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317166890|gb|ADV10428.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 343
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 43/118 (36%), Gaps = 5/118 (4%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG-----SR 95
Q + G V D ++ ++ + + ++GH D
Sbjct: 223 QSEVLFPTGSEVINDAGKVEMKKLADAIIELQKEIPPEINWVLRVDGHTDNKPLSGTGRY 282
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L R+ +V + + G+ A+R+ +G+ P E+A KNRR + L
Sbjct: 283 RDNWELSTARSTSVVKFLIENGVPANRLVAAGFGEFQPLDPADTEEARNKNRRIELKL 340
>gi|209695330|ref|YP_002263259.1| sodium-type flagellar protein MotY precursor [Aliivibrio
salmonicida LFI1238]
gi|208009282|emb|CAQ79548.1| sodium-type flagellar protein MotY precursor [Aliivibrio
salmonicida LFI1238]
Length = 292
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 2/105 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYA 108
+ FD +S + A + L+ + +++ L+ + D G++N + + RRA
Sbjct: 183 ILHFDKNSDELNKASKKRLAQIADFIKYTKDIDLVLVATYTDSSGAKNVNQQVSERRAVK 242
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ NYF + G+ A R++V SYG+ P KNRR ++ L
Sbjct: 243 LQNYFESIGLPADRIRVHSYGERRPIADNSTPIGKNKNRRVVISL 287
>gi|118475629|ref|YP_892653.1| Omp18 [Campylobacter fetus subsp. fetus 82-40]
gi|118414855|gb|ABK83275.1| Omp18 [Campylobacter fetus subsp. fetus 82-40]
Length = 173
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/171 (21%), Positives = 74/171 (43%), Gaps = 20/171 (11%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKIS--------------SPDTVLNESSLQEQFSSSV 48
+ ++ + + I+G + ++ S ++++ + +
Sbjct: 1 MKNLVLVSAVAAALFIAGCSSKSPEVDMNADANKMSNNNGMSNTDTMSDAERLNALMNQI 60
Query: 49 GD---SVFFDTSSYSIRPADIQVLSNLGSWLEKH---DCDFLIEGHADELGSRNSSIALG 102
+V+FD ++IRP V+ S ++ ++EG+ DE GS + ALG
Sbjct: 61 QSQVKNVYFDFDKFNIRPDMQGVVGTNASLFNQNGADSLRIMVEGNCDEWGSDEYNYALG 120
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++RA + VA+G+SA R+++TS G+ P + A+NRR +
Sbjct: 121 VKRAKTAKDALVAQGVSADRIEITSNGESKPVCTERTKACDAQNRRDEFKI 171
>gi|228910334|ref|ZP_04074150.1| OmpA/MotB domain protein [Bacillus thuringiensis IBL 200]
gi|229032155|ref|ZP_04188131.1| OmpA/MotB domain protein [Bacillus cereus AH1271]
gi|228729161|gb|EEL80161.1| OmpA/MotB domain protein [Bacillus cereus AH1271]
gi|228849286|gb|EEM94124.1| OmpA/MotB domain protein [Bacillus thuringiensis IBL 200]
Length = 123
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 42/115 (36%), Gaps = 6/115 (5%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGL 103
++ +++ FD+ ++ + + + S + + + GH D + N+ A
Sbjct: 1 MVTILENILFDSGKADVKLESLGIAKEMSSLLVSASPREITVSGHTDNVPIANAQFASNW 60
Query: 104 -----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
R + + + + YG+ ++ AKNRR VF+
Sbjct: 61 ELSTQRAVNFMQVLLQNKELQPEKFSAIGYGEYRSIAPNDTQEGKAKNRRVEVFI 115
>gi|172064675|ref|YP_001812325.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6]
gi|171998160|gb|ACB69076.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6]
Length = 552
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 43/111 (38%), Gaps = 3/111 (2%)
Query: 46 SSVGDSVFFDTSSYSIRPAD--IQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGL 103
+ F + + P ++ L D LIEGHAD GS ++I L
Sbjct: 434 VQIDSLSLFASGKATFSPEAAHRELAHALQLIQANPDQRVLIEGHADSEGSPRANILLSE 493
Query: 104 RRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA A+ ++ A+G + R + G P E A NRR V L
Sbjct: 494 ARARAIRDWLAAKGGLSVARFAIQGLGDVRPIADNSSEAGRALNRRVDVSL 544
>gi|323436025|ref|ZP_01049805.2| peptidoglycan-associated lipoprotein [Dokdonia donghaensis MED134]
gi|321496340|gb|EAQ39777.2| peptidoglycan-associated lipoprotein [Dokdonia donghaensis MED134]
Length = 306
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 53/132 (40%), Gaps = 5/132 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTS----SYSIRPADIQVLSNLGSW-LEKHDC 81
++ D + L + D + S ++ + L N+ + +
Sbjct: 174 AQAAEDEAKAQEDLANMAEAIKADPLVIYFDYSEASVNLNAQQRKKLGNITRYLDKVEGS 233
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
+EGH D GS ++ LGL RA Y GI+ +++K + G+ P E+
Sbjct: 234 SITVEGHTDSQGSMATNDRLGLERAEFGKQYLQNNGIAGAKIKTVTKGERNPIATNDTEE 293
Query: 142 AYAKNRRAIVFL 153
+NRRA++ +
Sbjct: 294 GRTQNRRAVITI 305
>gi|257457608|ref|ZP_05622775.1| chemotaxis protein MotB [Treponema vincentii ATCC 35580]
gi|257444994|gb|EEV20070.1| chemotaxis protein MotB [Treponema vincentii ATCC 35580]
Length = 238
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 41/127 (32%), Gaps = 8/127 (6%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIR-PADIQVLSNLGSW---LEKHDCDFLIEGHAD 90
+ +S + S+ FF +S + + L + + E F IEGH D
Sbjct: 106 IAVTSDERGIVISLAADSFFARNSAELNIEESRETLLRIAQFLSDKELAARRFRIEGHTD 165
Query: 91 ELG----SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S+ L RA V + G + + Y P + A N
Sbjct: 166 SSDALSGKWTSNWELSAARAINVLHNLTDFGAQEDKFSIAGYADTRPVYSNETAEGRAYN 225
Query: 147 RRAIVFL 153
RR + +
Sbjct: 226 RRVDIII 232
>gi|126173969|ref|YP_001050118.1| OmpA/MotB domain-containing protein [Shewanella baltica OS155]
gi|153000261|ref|YP_001365942.1| OmpA/MotB domain-containing protein [Shewanella baltica OS185]
gi|160874894|ref|YP_001554210.1| OmpA/MotB domain-containing protein [Shewanella baltica OS195]
gi|217973710|ref|YP_002358461.1| OmpA/MotB domain-containing protein [Shewanella baltica OS223]
gi|304409838|ref|ZP_07391458.1| OmpA/MotB domain protein [Shewanella baltica OS183]
gi|307304194|ref|ZP_07583947.1| OmpA/MotB domain protein [Shewanella baltica BA175]
gi|125997174|gb|ABN61249.1| OmpA/MotB domain protein [Shewanella baltica OS155]
gi|151364879|gb|ABS07879.1| OmpA/MotB domain protein [Shewanella baltica OS185]
gi|160860416|gb|ABX48950.1| OmpA/MotB domain protein [Shewanella baltica OS195]
gi|217498845|gb|ACK47038.1| OmpA/MotB domain protein [Shewanella baltica OS223]
gi|304352356|gb|EFM16754.1| OmpA/MotB domain protein [Shewanella baltica OS183]
gi|306913092|gb|EFN43515.1| OmpA/MotB domain protein [Shewanella baltica BA175]
gi|315267131|gb|ADT93984.1| OmpA/MotB domain protein [Shewanella baltica OS678]
Length = 289
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
L++ + D G R+ + + +RA +V ++FVA GI R+ +G+ D D
Sbjct: 215 VLVDAYTDSYGGRSVNQKVSDKRAESVKDFFVASGIPQDRIVTVGHGERRHVASNDDMDE 274
Query: 143 YAKNRRAIVFLK 154
A+NRR ++ +
Sbjct: 275 RARNRRVVIRIS 286
>gi|309751191|gb|ADO81175.1| Outer membrane protein P5 [Haemophilus influenzae R2866]
Length = 358
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 53/138 (38%), Gaps = 10/138 (7%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG-SWLEKHDCDFLIEGH 88
+ + + S+ V F +++P L ++ + + G+
Sbjct: 221 QGAAPVVAAPEVVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGEMSQVKSAKVAVAGY 280
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY--- 143
D +GS ++ L RA +V NYFVA+G++A + T YG+ P
Sbjct: 281 TDRIGSDAFNVKLSQERADSVANYFVAKGVAADAISATGYGEANPVTGATCDQVKGRKAL 340
Query: 144 ----AKNRRAIVFLKGCR 157
A +RR + + G +
Sbjct: 341 IACLAPDRRVEIAVNGTK 358
>gi|257095753|ref|YP_003169394.1| peptidoglycan-associated lipoprotein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257048277|gb|ACV37465.1| peptidoglycan-associated lipoprotein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 176
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 1/112 (0%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRN 96
+ L + S SV+FD SY ++ +++ + + LI+G+ DE GSR
Sbjct: 56 AVLTDPTSILSKRSVYFDFDSYEVKSEYKDLVTAHAKFLTDNRQFKMLIQGNTDERGSRE 115
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
++ALG +RA AV G +++ S G+E P GHDE A+A+NRR
Sbjct: 116 YNLALGQKRADAVRKMLTLLGAREDQLESVSLGEEKPKNEGHDESAWAQNRR 167
>gi|119478742|ref|ZP_01618600.1| Flagellar motor protein [marine gamma proteobacterium HTCC2143]
gi|119448371|gb|EAW29625.1| Flagellar motor protein [marine gamma proteobacterium HTCC2143]
Length = 130
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 32/77 (41%), Gaps = 5/77 (6%)
Query: 83 FLIEGHADELGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYG 137
I+GH D S+ L RA +V + ++ R++V+ + + P
Sbjct: 9 ISIQGHTDNNPIKTTRFRSNWELSTSRAVSVAHALFEGNILNPRRVEVSGFAETRPLSSN 68
Query: 138 HDEDAYAKNRRAIVFLK 154
+ AKNRR + ++
Sbjct: 69 DTVEGRAKNRRVEIVIQ 85
>gi|88858085|ref|ZP_01132727.1| putative chemotaxis protein [Pseudoalteromonas tunicata D2]
gi|88819702|gb|EAR29515.1| putative chemotaxis protein [Pseudoalteromonas tunicata D2]
Length = 321
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 48/118 (40%), Gaps = 4/118 (3%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNS--- 97
Q+ + + + F + S +V+ ++ ++ D I G D+ N
Sbjct: 148 QDWLTIELSSGLLFGSGSAVATLNAKKVVKDIYEIVKSVDNYIRIRGFTDDRPINNELFS 207
Query: 98 -SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ L + RA + GI+ ++M + YG+ P+ E+ A NR+ ++ L
Sbjct: 208 SNWQLSVARATEMLLQLERLGINPAQMAIEGYGEHSPTSSNETEEGRAANRKVVIALS 265
>gi|259090547|gb|ACV91896.1| OprL [Pseudomonas fluorescens]
gi|259090549|gb|ACV91897.1| OprL [Pseudomonas fluorescens]
gi|259090551|gb|ACV91898.1| OprL [Pseudomonas fluorescens]
gi|259090557|gb|ACV91901.1| OprL [Pseudomonas fluorescens]
gi|259090559|gb|ACV91902.1| OprL [Pseudomonas fluorescens]
gi|259090563|gb|ACV91904.1| OprL [Pseudomonas fluorescens]
gi|259090565|gb|ACV91905.1| OprL [Pseudomonas fluorescens]
gi|259090567|gb|ACV91906.1| OprL [Pseudomonas fluorescens]
gi|259090569|gb|ACV91907.1| OprL [Pseudomonas fluorescens]
gi|259090571|gb|ACV91908.1| OprL [Pseudomonas fluorescens]
gi|259090585|gb|ACV91915.1| OprL [Pseudomonas fluorescens]
gi|259090587|gb|ACV91916.1| OprL [Pseudomonas fluorescens]
Length = 157
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 65/128 (50%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+ G +T + SL E+ + + +F+ S ++P ++ L L
Sbjct: 30 AGEGAAVDPNAGYGANTGAVDGSLSEEAALRAITTFYFEYDSSDLKPEAMRALDVHAKDL 89
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ + ++EG+ D G+R ++ALG RRA AV Y V +G++ ++++ SYGKE P
Sbjct: 90 KANGARVVLEGNTDARGTREYNMALGERRAKAVQRYLVLQGVAPGQLELVSYGKERPVAT 149
Query: 137 GHDEDAYA 144
G+D ++A
Sbjct: 150 GNDXQSWA 157
>gi|270047795|pdb|3KHN|A Chain A, Crystal Structure Of Putative Motb Like Protein Dvu_2228
From Desulfovibrio Vulgaris.
gi|270047796|pdb|3KHN|B Chain B, Crystal Structure Of Putative Motb Like Protein Dvu_2228
From Desulfovibrio Vulgaris
Length = 174
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 55/134 (41%), Gaps = 6/134 (4%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLI 85
++ + V+ + + V V F + + P +VL+ L ++ + + + I
Sbjct: 28 TVNGVEGVIGAVFDEGVITLRVPSEVLFAPGAVELAPGADRVLATLKDLFIRRREQNINI 87
Query: 86 EGHADELGS-----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+G D++ + + R+ V YF+ GI +R+ T G+ P +
Sbjct: 88 KGFTDDVQPSANARFKDNWEVSALRSVNVLRYFLGAGIEPARLTATGLGELDPLFPNTSD 147
Query: 141 DAYAKNRRAIVFLK 154
+ A+NRR L+
Sbjct: 148 ENRARNRRVEFVLE 161
>gi|120598160|ref|YP_962734.1| OmpA/MotB domain-containing protein [Shewanella sp. W3-18-1]
gi|120558253|gb|ABM24180.1| OmpA/MotB domain protein [Shewanella sp. W3-18-1]
Length = 196
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 41/105 (39%), Gaps = 2/105 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
V+F+ + + + + L+ + +D L+ GH D +G+ + L L+RA V
Sbjct: 89 IVYFEFAIAEVDLSQWKSLALVKAFLEANNDVALLLVGHTDIVGTPEFNYQLSLQRAENV 148
Query: 110 FNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V G + +R + G P + NRR +
Sbjct: 149 RRILVEDYGFNPNRFTIVGKGISEPVADNRSSEGRRLNRRVQFIV 193
>gi|332307428|ref|YP_004435279.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332174757|gb|AEE24011.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 305
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 52/132 (39%), Gaps = 5/132 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
D + SL +Q + ++ F S ++P +L +G+ L D I GH+D
Sbjct: 164 DGAIEMESLGQQLIIRIRENGSFSAGSAFLQPQFKPILRKIGTLLADMPGDIEISGHSDS 223
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
L S+ L +RA AV RM V P + D A ++N
Sbjct: 224 LVISNELYRSNWDLSAQRAVAVAEELRKAPGFDEGRMAVIGKADTAPLLGEDDAQARSRN 283
Query: 147 RRAIVFLKGCRA 158
RR + +K +A
Sbjct: 284 RRVEIAVKQGKA 295
>gi|317486269|ref|ZP_07945101.1| peptidoglycan-associated lipoprotein [Bilophila wadsworthia 3_1_6]
gi|316922439|gb|EFV43693.1| peptidoglycan-associated lipoprotein [Bilophila wadsworthia 3_1_6]
Length = 165
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 65/162 (40%), Gaps = 9/162 (5%)
Query: 1 MQ--YSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD------SV 52
M ++ + M + G T + + + V
Sbjct: 1 MNTFKRLALVVTLVVAMGAGFGCAKKQTGADVAPATTADDNGAANAAIERAAQAITDGIV 60
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
+FD I+ +L ++ + IEG+ D G++ ++ALG RRA A +
Sbjct: 61 YFDFDKSDIKAESRDMLRQKAELMKAYPSIRVRIEGNCDARGTQEYNLALGERRARAAYE 120
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
Y V G++ +M++ S+GKE P+V G +AKNRR +
Sbjct: 121 YLVMLGVNPDQMEMISFGKERPAVEGTGPAVWAKNRRDDFRV 162
>gi|218658643|ref|ZP_03514573.1| putative outer membrane porin involved in nitrogen fixation
[Rhizobium etli IE4771]
Length = 262
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 40/131 (30%), Gaps = 5/131 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ ++ S + + +S F T S + +L +G L ++
Sbjct: 98 QPEVEKKLVTLSDSNGRLLVRISNSGLFATGSAEVSEKFHDLLQRIGGALAAEKFRAVVV 157
Query: 87 GHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
G+ D + S+ L RA AV A + P ++
Sbjct: 158 GYTDNVPIRTIQFPSNWHLSEARAKAVGEIL-ASFTGPGAILTEGRADSDPIAGNDTQEG 216
Query: 143 YAKNRRAIVFL 153
NRR + +
Sbjct: 217 REMNRRTEILV 227
>gi|158604954|gb|EAT98065.3| OmpA/MotB [Campylobacter concisus 13826]
Length = 259
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 8/132 (6%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV-LSNLGSWLEKHDCDFL-- 84
+S + ++ F + ++ FD S I D ++ L +G + K +
Sbjct: 106 TASGAPEITMEESEDGFIVRLPAAMLFDKDSAEISGEDAKLFLKRIGMIIAKMPNEVKTD 165
Query: 85 IEGHADELG-----SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
I G+ D ++ L RA +V V+ G+ R+ + P
Sbjct: 166 IIGYTDNTNPSKDSIYKNNWQLSTARALSVLEELVSDGVPQERLITSGRASFDPIASNST 225
Query: 140 EDAYAKNRRAIV 151
++ AKN R +
Sbjct: 226 DEGRAKNNRVEI 237
>gi|309244385|gb|ADO52197.1| OprL [Pseudomonas sp. AF32]
Length = 156
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 65/123 (52%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+T + SL E+ + + +F+ S ++P ++ L L+ +
Sbjct: 34 AVDPNAGYGANTGAVDGSLSEEAALRAITTFYFEYDSSDLKPEAMRSLDVHAKDLKANGA 93
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
++EG+ DE G+R ++ALG RRA AV Y V +G+S +++++ SYG+E P G+D
Sbjct: 94 RVVLEGNTDERGTREYNMALGERRAKAVQRYLVLQGVSPAQLELVSYGEERPVATGNDXQ 153
Query: 142 AYA 144
++A
Sbjct: 154 SWA 156
>gi|186470892|ref|YP_001862210.1| DotU family type IV/VI secretion system protein [Burkholderia
phymatum STM815]
gi|184197201|gb|ACC75164.1| type IV / VI secretion system protein, DotU family [Burkholderia
phymatum STM815]
Length = 410
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 40/105 (38%), Gaps = 4/105 (3%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSI----ALGLRRAYA 108
F+ S+ P +++ +G + K L+ GH D + AL RA
Sbjct: 304 IFEAGQSSVNPWVKPLITTIGQEVAKTPGRVLVTGHTDSQPFSHMQRSSNLALSDARAQE 363
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V V+ G++ R+ T G P+ +NRR + +
Sbjct: 364 VAQILVSAGVATDRIDSTGKGNAEPAADNATPQGRLRNRRVEITV 408
>gi|332088113|gb|EGI93238.1| ompA family protein [Shigella boydii 5216-82]
Length = 127
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 2/123 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF-LIEGHADE 91
+ +S + D++ F + Y + P Q + + + L ++GH D
Sbjct: 2 QSYGFTESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAQLASTGLTHARMDGHTDN 61
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + + L L+RA V + + G + GK+ P A+NRR
Sbjct: 62 YGEDSYNEGLSLKRANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVA 121
Query: 151 VFL 153
V +
Sbjct: 122 VVI 124
>gi|313610144|gb|EFR85455.1| chemotaxis protein MotB [Listeria monocytogenes FSL F2-208]
Length = 170
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 45/137 (32%), Gaps = 8/137 (5%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--LIEGHA 89
T + E ++ D + F + S + ++ +G + ++ GH
Sbjct: 29 GTKMTTKYSDEGLLITIRDDILFQSGSAELTAGKREIAKEIGELFXQGKGTMEGIVSGHT 88
Query: 90 DELGS----RNSSIALGLRRAYAVFNYFV--ARGISASRMKVTSYGKEMPSVYGHDEDAY 143
D + +S+ L + RA + ++ YG+ P
Sbjct: 89 DNVPISTSIYSSNWELSVARAVNFMEAIIQENSEVNPGEFSARGYGEFRPVAKNDIAANR 148
Query: 144 AKNRRAIVFLKGCRANT 160
KNRR + ++ +T
Sbjct: 149 EKNRRVEIMVRPINRDT 165
>gi|307132015|ref|YP_003884031.1| outer membrane protein A (3a;II*;G;d) [Dickeya dadantii 3937]
gi|306529544|gb|ADM99474.1| outer membrane protein A (3a;II*;G;d) [Dickeya dadantii 3937]
Length = 353
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPA---DIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P + L + S L+ D ++ G D LGS + L
Sbjct: 223 TLKSDVLFNFNKATLKPEGQRSLDQLYSQLSTLDPKDGSVVVLGFTDRLGSDQYNQTLST 282
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
+RA V +Y V +GI A+++ GK P + A A +RR + +K
Sbjct: 283 KRAQTVVDYLVHKGIPANKISARGMGKANPVSGSTCTNVKARAALIDCLAPDRRVEIEVK 342
Query: 155 GCR 157
G +
Sbjct: 343 GIK 345
>gi|251788834|ref|YP_003003555.1| outer membrane protein A [Dickeya zeae Ech1591]
gi|247537455|gb|ACT06076.1| OmpA domain protein transmembrane region-containing protein
[Dickeya zeae Ech1591]
Length = 355
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPA---DIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P + L + S L+ D ++ G D LGS + L
Sbjct: 225 TLKSDVLFNFNKATLKPEGQRSLDQLYSQLSSLDPKDGSVVVLGFTDRLGSDQYNQTLST 284
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
+RA V +Y V +GI ++++ GK P + A A +RR + +K
Sbjct: 285 KRAQTVVDYLVHKGIPSNKISARGMGKANPVSGSTCANVKARAALIDCLAPDRRVEIEVK 344
Query: 155 GCR 157
G +
Sbjct: 345 GIK 347
>gi|156319761|ref|XP_001618159.1| hypothetical protein NEMVEDRAFT_v1g225448 [Nematostella vectensis]
gi|156197754|gb|EDO26059.1| predicted protein [Nematostella vectensis]
Length = 294
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAV 109
++FD + +IR L+ + ++++ + H D S + L +RA A
Sbjct: 183 IIYFDLNKSNIRKDAALELAKIVEVMKENPSIKVDVRSHTDSRQSAEYNEELSDKRAKAT 242
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHD-----EDAYAKNRRAIVFL 153
+ V +GISA R+ YG+ D E+ + NRR+ +
Sbjct: 243 VAWMVKKGISADRLTAKGYGESQLVNKCSDGVECSEEEHQANRRSEFIV 291
>gi|299822262|ref|ZP_07054148.1| chemotaxis protein MotB [Listeria grayi DSM 20601]
gi|299815791|gb|EFI83029.1| chemotaxis protein MotB [Listeria grayi DSM 20601]
Length = 265
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 47/131 (35%), Gaps = 8/131 (6%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--LIEGHA 89
+ L+ + ++ D + FD+ S + + ++ +G ++ D +I GH
Sbjct: 126 EAKLSTRYANDGLLITIRDDILFDSGSAELSASKRKIAKEIGMLFKQGDSKMEGIISGHT 185
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGI------SASRMKVTSYGKEMPSVYGHDEDAY 143
D++ ++ + A F+ I YG+ P +
Sbjct: 186 DDVPIHTATYKSNWELSAARAVNFMEAIITENTSLDPGLFSARGYGEYKPVAKNDNAVDR 245
Query: 144 AKNRRAIVFLK 154
KNRR + ++
Sbjct: 246 EKNRRVEIMVR 256
>gi|254492390|ref|ZP_05105562.1| OmpA family protein [Methylophaga thiooxidans DMS010]
gi|224462282|gb|EEF78559.1| OmpA family protein [Methylophaga thiooxydans DMS010]
Length = 281
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 47/116 (40%), Gaps = 3/116 (2%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNSS 98
+ F +V+F+ ++ P + L+ L +++ D I H D G R +
Sbjct: 164 PDTFGEVNKLTVYFEIEQATLTPVAKKALTRLAEYVKVDDSINQIKIASHTDNHGRRRLN 223
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA ++ + + + + + SY + P+ AKNRRA + L
Sbjct: 224 EPLSDARALSIKRFLITEFEIPEQLISINSYVEAKPTASNKTPLGRAKNRRAEITL 279
>gi|118588357|ref|ZP_01545766.1| hypothetical protein SIAM614_23787 [Stappia aggregata IAM 12614]
gi|118439063|gb|EAV45695.1| hypothetical protein SIAM614_23787 [Stappia aggregata IAM 12614]
Length = 321
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 46/119 (38%), Gaps = 13/119 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIEGHADELG-----S 94
V FD+ I P Q L L +++ ++GH D
Sbjct: 200 FQSEVLFDSGQEDINPEGRQELDKLADAIQELSAQIPDEINWVLRVDGHTDARPLSGTGR 259
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L RA +V Y + RG+ R+ +G+ P G ++A AKNRR + L
Sbjct: 260 LRNNWELSAARAISVVRYLIERGVDPKRLVAAGFGEFQPLEEGDTQEALAKNRRIELKL 318
>gi|24375803|ref|NP_719846.1| OmpA family protein [Shewanella oneidensis MR-1]
gi|24350753|gb|AAN57290.1|AE015865_4 OmpA family protein [Shewanella oneidensis MR-1]
Length = 201
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/188 (19%), Positives = 62/188 (32%), Gaps = 28/188 (14%)
Query: 1 MQYSTIFI---ILSAITMM------SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD- 50
M+ S + + +L+ ++ ++ D D V+ + + G
Sbjct: 1 MKTSILLLSVTLLAGCSIRDTVNIDEMTTTQASDLSDKDGDGVIEARERCNETAKGAGTD 60
Query: 51 ----------------SVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELG 93
+V F +S I P + + + + IEGH G
Sbjct: 61 NYGCGQIKSINERKEINVLFPNNSAYIAPEYYPQIEEVAIFLRQYPTTKVTIEGHTSRTG 120
Query: 94 SRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ ++ L RA AV R I SR+ YG P V +A +NRR +
Sbjct: 121 TDETNKELSQERANAVTAVLAERFGIDRSRLTAIGYGSSRPIVLEQTPEAEIRNRRVVAE 180
Query: 153 LKGCRANT 160
+ G T
Sbjct: 181 VTGDDTAT 188
>gi|115359322|ref|YP_776460.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD]
gi|115284610|gb|ABI90126.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
Length = 224
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 1/110 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLR 104
++ F T ++ PA L L S E + GH D +G+ +++AL R
Sbjct: 114 VNLAGDALFATGLATLTPAARASLDKLLSEREDRTYTQVTVTGHTDSVGNDAANLALSKR 173
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RA V Y A G++A + V+ G P + A NRR + L+
Sbjct: 174 RAETVAGYLKAHGLNAQTVSVSGRGSADPVASNATAEGRASNRRVDISLQ 223
>gi|258593271|emb|CBE69610.1| exported protein of unknown function [NC10 bacterium 'Dutch
sediment']
Length = 224
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/105 (45%), Positives = 62/105 (59%), Gaps = 1/105 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAV 109
+FFD SIR + L+ WL+ + +IEGH DE G+ + ALG RRA +V
Sbjct: 120 DIFFDFDRSSIRTEMAKGLAENVRWLKANPTASIIIEGHCDERGTVEYNQALGQRRAMSV 179
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+Y V GISA +MKV SYGKE P GHDE A+ NRRA + L+
Sbjct: 180 KSYLVEAGISARKMKVVSYGKERPFATGHDESAWKWNRRAHLVLQ 224
>gi|163738369|ref|ZP_02145784.1| OmpA/MotB [Phaeobacter gallaeciensis BS107]
gi|161388290|gb|EDQ12644.1| OmpA/MotB [Phaeobacter gallaeciensis BS107]
Length = 211
Score = 66.0 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 59/138 (42%), Gaps = 4/138 (2%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
G L +F+ V ++ F S + VL W+ +
Sbjct: 34 GNATNSNAAVMAGERDFAIQLATRFAEEVPTTITFAFDSAQLDGNARAVLDKQAHWIRQF 93
Query: 80 D-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT-SYGKEMPSVYG 137
F + GH D +GS + +LGLRRA A NY V+RGIS SR++ S+G+ P +
Sbjct: 94 PEVRFRVFGHTDAVGSAGYNKSLGLRRARAAVNYLVSRGISRSRLQAVVSFGETQPLIPT 153
Query: 138 HDEDAYAKNRRAIVFLKG 155
D + NRR + + G
Sbjct: 154 SDRERR--NRRTVTEVSG 169
>gi|312881847|ref|ZP_07741618.1| sodium type flagellar protein MotY precursor [Vibrio caribbenthicus
ATCC BAA-2122]
gi|309370493|gb|EFP97974.1| sodium type flagellar protein MotY precursor [Vibrio caribbenthicus
ATCC BAA-2122]
Length = 293
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYA 108
+ +D SS + + L+ + ++++ L+ + D S+++S L +RA A
Sbjct: 184 ILHYDRSSVELNKQSQKRLAKIAEYIKQTKDIDLVLVSTYTDNEDSKSASQGLSEQRAKA 243
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ YF + G+ R++V YGK P +NRR ++ L
Sbjct: 244 LQRYFKSLGLPEDRIQVQGYGKRRPIDDNASPIGKDRNRRVVISL 288
>gi|289433964|ref|YP_003463836.1| chemotaxis protein MotB [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|315301919|ref|ZP_07872930.1| chemotaxis protein MotB [Listeria ivanovii FSL F6-596]
gi|289170208|emb|CBH26748.1| chemotaxis protein MotB [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|313629715|gb|EFR97837.1| chemotaxis protein MotB [Listeria ivanovii FSL F6-596]
gi|313634398|gb|EFS00987.1| chemotaxis protein MotB [Listeria seeligeri FSL N1-067]
Length = 275
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 45/136 (33%), Gaps = 8/136 (5%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--L 84
+ T + E ++ D + F + S + ++ +G + +
Sbjct: 129 QAEKLGTKMTTKYSDEGLLITIRDDILFQSGSAELSAGKREIAKEIGDLFAQGKGTMEGI 188
Query: 85 IEGHADELG----SRNSSIALGLRRAYAVFNYFV--ARGISASRMKVTSYGKEMPSVYGH 138
+ GH D + + +S+ L + RA + ++ YG+ P
Sbjct: 189 VSGHTDNVPISTSTYSSNWELSVARAVNFMEAIIQENNEVNPGEFSARGYGEFKPVAKND 248
Query: 139 DEDAYAKNRRAIVFLK 154
KNRR + ++
Sbjct: 249 VATNREKNRRVEIMVR 264
>gi|148284999|ref|YP_001249089.1| peptidoglycan-associated lipoprotein precursor [Orientia
tsutsugamushi str. Boryong]
gi|146740438|emb|CAM80934.1| peptidoglycan-associated lipoprotein precursor [Orientia
tsutsugamushi str. Boryong]
Length = 202
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/146 (26%), Positives = 73/146 (50%), Gaps = 4/146 (2%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL 72
++ ++ D + + + + ++ Q + V+F T + + +VL
Sbjct: 53 VSSINAESSDQVTSNNAQQEGYVDVKHEQFLQAIHRKHKVYFATEKFDLSEESKRVLRAQ 112
Query: 73 GSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
WL+ + +IEGH DE G+R ++ALG +RA +V + V G+S +++ TSYGK+
Sbjct: 113 SDWLKNNPDVKIIIEGHCDERGTREYNLALGKKRADSVKQFLVTLGVSRDKIETTSYGKD 172
Query: 132 MP---SVYGHDEDAYAKNRRAIVFLK 154
P + ++AY NRR++ +K
Sbjct: 173 KPEVEVTKDNKDEAYRLNRRSVTIIK 198
>gi|315125307|ref|YP_004067310.1| outer membrane protein; signal peptide [Pseudoalteromonas sp.
SM9913]
gi|315013820|gb|ADT67158.1| putative outer membrane protein; signal peptide [Pseudoalteromonas
sp. SM9913]
Length = 354
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 58/137 (42%), Gaps = 1/137 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD- 80
D + + +L E +V V F + S+ + + + ++L+++
Sbjct: 212 DKCANTPMTDAVGSDGCTLYEDTEVTVSLLVTFPNNDSSVSQQYLNDIDEVATFLKEYPD 271
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
L+EGH +G + + L +RA AV +A GI+ R+ G+E +
Sbjct: 272 TTVLLEGHTSAVGKASYNKWLSKKRADAVAKKLIADGIAEDRITTAGLGEERLKNEANTA 331
Query: 141 DAYAKNRRAIVFLKGCR 157
A+A+NRR +K +
Sbjct: 332 KAHAENRRVEAHVKSIK 348
>gi|308050039|ref|YP_003913605.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
gi|307632229|gb|ADN76531.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
Length = 296
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
+ + A + LS++ +++ + + L++GH D +G +++AL RA V
Sbjct: 181 YRSGQLLPNTAQLNQLSDIAAYVAADPRITEVLVDGHTDNVGDHLANLALSRDRADEVGA 240
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RGIS R++V +G+ P + ++ NRR + L
Sbjct: 241 LLHERGISRDRIQVRGHGERYPLLSNNNAQGRQHNRRVTIRL 282
>gi|172062649|ref|YP_001810300.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6]
gi|171995166|gb|ACB66084.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6]
Length = 228
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 46/116 (39%), Gaps = 5/116 (4%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGS----RNS 97
+ + F+ + P VLS + L +H D L+EGH D S
Sbjct: 111 GIEIGIDAKILFNVGDARLLPDATPVLSEIARALSEHATGDILVEGHTDSAPIANAKYES 170
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA +V Y RG++ R+ P V D A A+NRR +F+
Sbjct: 171 NWELSSARAGSVVRYLADRGVAPHRLAAIGRADTQPLVASDDAPARARNRRVTIFV 226
>gi|323177269|gb|EFZ62857.1| ompA family protein [Escherichia coli 1180]
Length = 127
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 2/123 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF-LIEGHADE 91
+ +S + D++ F + Y + P Q + + + L ++GH D
Sbjct: 2 QSYGFTESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHAHMDGHTDN 61
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + + L L+RA V + + G + GK+ P A+NRR
Sbjct: 62 YGEDSYNEGLSLKRANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVA 121
Query: 151 VFL 153
V +
Sbjct: 122 VVI 124
>gi|281421937|ref|ZP_06252936.1| OmpA family protein [Prevotella copri DSM 18205]
gi|281403991|gb|EFB34671.1| OmpA family protein [Prevotella copri DSM 18205]
Length = 284
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 48/119 (40%), Gaps = 11/119 (9%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADE---------LGSR 95
S+ D++ + + SY + + LS + + + D D L+EG+ D + +
Sbjct: 148 ISLADNMLYQSGSYEVNSRAQETLSKIAKIITDYKDYDVLVEGNTDNVPVSTTSAKMKNI 207
Query: 96 NSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L RA +V Y ++ R+ G+ P E +NRR + +
Sbjct: 208 RNNWDLSALRAASVVQYLQDHFGVNPKRLTAGGRGEYNPVTTNDTEVGKQRNRRTQIII 266
>gi|260914347|ref|ZP_05920816.1| outer membrane protein A [Pasteurella dagmatis ATCC 43325]
gi|260631448|gb|EEX49630.1| outer membrane protein A [Pasteurella dagmatis ATCC 43325]
Length = 341
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 49/121 (40%), Gaps = 10/121 (8%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRR 105
++ V F +++P VL + + + + G+ D LGS ++ L RR
Sbjct: 221 TLNSDVTFAFDKANLKPEAQGVLDGIYGEIAQLQSASVAVAGYTDRLGSDAYNLKLSQRR 280
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLKGC 156
A V NY V++G++ + T G+ P A +RR + +KG
Sbjct: 281 ADTVANYLVSKGVAPQAISATGMGESSPVTGNKCDSVKGRKALIACLADDRRVEISVKGN 340
Query: 157 R 157
+
Sbjct: 341 K 341
>gi|330818872|ref|YP_004351089.1| Outer membrane protein [Burkholderia gladioli BSR3]
gi|327374414|gb|AEA65766.1| Outer membrane protein [Burkholderia gladioli BSR3]
Length = 231
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 49/119 (41%), Gaps = 4/119 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ + + S+ ++V+F S + L L I+G+ D
Sbjct: 112 ASIMKQEMPPPSESTASNTVYFYVDSSQLDAKARAGLDVL----PIEASHVQIDGYTDNT 167
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
G+ + L RRA AV Y + RG+ A+++ T++G+ H A NRRA V
Sbjct: 168 GTSRYNRRLSERRALAVKRYLMVRGVDAAKITTTAHGESGAVASNHTAHGRALNRRADV 226
>gi|309244379|gb|ADO52194.1| OprL [Pseudomonas cichorii]
gi|309244381|gb|ADO52195.1| OprL [Pseudomonas cichorii]
Length = 156
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 65/123 (52%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+T + SL E+ + + +F+ S ++P ++ L L+ +
Sbjct: 34 AVDPNAGYGANTGAVDGSLSEEAALRAITTFYFEYDSSDLKPEALRALDVHAKDLKANGA 93
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
++EG+ DE G+R ++ALG RRA AV Y V +G+S +++++ SYG+E P G+D
Sbjct: 94 RVVLEGNTDERGTREYNMALGERRAKAVQRYLVLQGVSPAQLELVSYGEERPVATGNDXQ 153
Query: 142 AYA 144
++A
Sbjct: 154 SWA 156
>gi|242280812|ref|YP_002992941.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
gi|242123706|gb|ACS81402.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
Length = 248
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 51/132 (38%), Gaps = 5/132 (3%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI 85
+ + + Q+ S + F+ S ++RP +VL + S L+ H+ + ++
Sbjct: 108 DEDDATRKSSGVKADQDGVVVSTDSATLFEPGSATLRPEAHKVLDKVISILKDHNYNLVV 167
Query: 86 EGHADELGSR----NSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVYGHDE 140
GH D ++ L RA + Y V +G R+K Y P V
Sbjct: 168 RGHTDNSEIHSRKFPTNWELSSARAASALRYIVEQGGIAPKRLKAVGYADTQPLVKNDSP 227
Query: 141 DAYAKNRRAIVF 152
+KNRR F
Sbjct: 228 ANKSKNRRLEFF 239
>gi|88658586|ref|YP_507279.1| OmpA family protein [Ehrlichia chaffeensis str. Arkansas]
gi|88600043|gb|ABD45512.1| OmpA family protein [Ehrlichia chaffeensis str. Arkansas]
Length = 175
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/162 (22%), Positives = 68/162 (41%), Gaps = 18/162 (11%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKI-SSPDTVLNESSLQEQFSSSVGDSVFFDTSSY 59
M++ +FI + + +S D + D V + + E ++F
Sbjct: 1 MKHKLVFIKFM-LLCLILSSCKTTDHVPLVNVDHVFSNTKTIE--------KIYFGFGKA 51
Query: 60 SIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNY-FVARG 117
+I +D +L + E++ + +I GH D G+ ++ LG +RA AV ++
Sbjct: 52 TIEDSDKTILEKVMQKAEEYPDTNIIIVGHTDTRGTDEYNLELGKQRANAVKDFILERNK 111
Query: 118 ISASRMKVTSYGKEMP---SVYGHDEDA---YAKNRRAIVFL 153
R+ + S GK P + E+A + KNRR ++ L
Sbjct: 112 SLEDRIIIESKGKSEPAVLVYSNNPEEAEYAHTKNRRVVITL 153
>gi|157736518|ref|YP_001489201.1| OmpA domain-containing protein [Arcobacter butzleri RM4018]
gi|315635678|ref|ZP_07890941.1| OmpA domain protein [Arcobacter butzleri JV22]
gi|157698372|gb|ABV66532.1| OmpA domain protein [Arcobacter butzleri RM4018]
gi|315479975|gb|EFU70645.1| OmpA domain protein [Arcobacter butzleri JV22]
Length = 241
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 56/136 (41%), Gaps = 2/136 (1%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+ ++N + P+ L S+ DS+ F+T+S + + +S + S L+K
Sbjct: 95 TNVNNNPQAVLDPNQDLIVSNTDNYVKIMFRDSMMFETNSANPTYSAQTKISKIYSVLQK 154
Query: 79 HDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+ + GH D G+ + L +RA V N ++++ + P
Sbjct: 155 YPNTLVQVVGHTDSRGTHTYNQTLSEQRATNVGNIIYN-SGVSNQIFSRGCSFDKPVALN 213
Query: 138 HDEDAYAKNRRAIVFL 153
+ E A NRR V+L
Sbjct: 214 NSESNMALNRRVEVYL 229
>gi|74055057|gb|AAZ95862.1| PomB [Aeromonas hydrophila]
Length = 303
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 53/147 (36%), Gaps = 4/147 (2%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+T+ I V+ + + + + F + S + VL+
Sbjct: 110 GMTLAKIDTQLKESMGTLVDAGVVKLTLDDNWLTVELSSGLLFGSGSAFMSTNADPVLNT 169
Query: 72 LGSWLEKHDCDFLIEGHADELGSRNS----SIALGLRRAYAVFNYFVARGISASRMKVTS 127
L L+ D + G+ D N + L RA AV +A+GI+ R+ +
Sbjct: 170 LSDILKPVDNYVRVRGYTDNQQINNEIFRSNWTLSAARAEAVLTVLIAKGIAPQRLAYEA 229
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFLK 154
YG+ P E +NR+ +V +
Sbjct: 230 YGEFSPFAGNDSEQGRLQNRKVVVAIS 256
>gi|121604950|ref|YP_982279.1| OmpA domain-containing protein [Polaromonas naphthalenivorans CJ2]
gi|120593919|gb|ABM37358.1| OmpA domain protein [Polaromonas naphthalenivorans CJ2]
Length = 179
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 27/177 (15%)
Query: 1 MQ--YSTIFIILSAITMMSISGIDNL-----------------------DTKISSPDTVL 35
M+ S++ L + G + ++ +P +
Sbjct: 1 MKRFLSSVISSLVLAATLVACGSNVKLQDVPVEDRSASSSQADADAAAAASRGVAPVQIG 60
Query: 36 NESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGS 94
+ +++ V+FD SY ++P V+ + IEGH DE+G
Sbjct: 61 ASDASVAGPANTAK-IVYFDFDSYVVKPEFQSVIEAHARYLTANKARKMAIEGHTDEIGG 119
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
R ++ALG +RA AV G++ S+++ S+GKE P+V G DE + AKNRRA +
Sbjct: 120 REYNLALGQKRAEAVRRALGLLGVTDSQVEAVSFGKEKPAVPGLDEASMAKNRRAEI 176
>gi|307823763|ref|ZP_07653991.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
gi|307735057|gb|EFO05906.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
Length = 322
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 59/147 (40%), Gaps = 9/147 (6%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
++ S D+ +P SS E S V FF + + R + N+
Sbjct: 172 LTESAQPAGDSGFPTPAAEGKRSSQHEPVSLLVLGGGFFSSGQITPRANIQDAIDNIIPL 231
Query: 76 LEKHDC-DFLIEGHADELGSRNSSIA--------LGLRRAYAVFNYFVARGISASRMKVT 126
++ + ++EGHAD+ +S A + LRRA A+ +GI++ R+ V
Sbjct: 232 IQTRPLDNVVVEGHADKWVPFGASPAQVSKLNENISLRRANAIAQVLKKKGIASDRIIVH 291
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G +P D KNRR + L
Sbjct: 292 GLGDTVPLASNLTYDGRMKNRRVEIKL 318
>gi|307826489|ref|ZP_07656672.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
gi|307732463|gb|EFO03357.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
Length = 238
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 59/147 (40%), Gaps = 9/147 (6%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
++ S D+ +P SS E S V FF + + R + N+
Sbjct: 88 LTESAQPAGDSGFPTPAAEGKRSSQHEPVSLLVLGGGFFSSGQITPRANIQDAIDNIIPL 147
Query: 76 LEKHDC-DFLIEGHADELGSRNSSIA--------LGLRRAYAVFNYFVARGISASRMKVT 126
++ + ++EGHAD+ +S A + LRRA A+ +GI++ R+ V
Sbjct: 148 IQTRPLDNVVVEGHADKWVPFGASPAQVSKLNENISLRRANAIAQVLKKKGIASDRIIVH 207
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G +P D KNRR + L
Sbjct: 208 GLGDTVPLASNLTYDGRMKNRRVEIKL 234
>gi|261414609|ref|YP_003248292.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261371065|gb|ACX73810.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302327079|gb|ADL26280.1| putative peptidoglycan-associated lipoprotein [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 192
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/116 (32%), Positives = 64/116 (55%), Gaps = 1/116 (0%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSS 98
L+E + + + V+FD + ++L+ + + ++ +EGH D G+ + +
Sbjct: 74 LEELINRIMLEDVYFDYDRSELTENAKRLLAQVAEILVNENRFIVTVEGHTDARGTEDYN 133
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
I+LG RR+ V + +A G+ A+R+ SYGKE P V G DE AY+KNRRA +
Sbjct: 134 ISLGARRSTVVREFLIAYGVDANRLVSVSYGKERPKVQGTDETAYSKNRRAHFRVS 189
>gi|227356882|ref|ZP_03841261.1| OOP family OmpA-OmpF porin [Proteus mirabilis ATCC 29906]
gi|227162952|gb|EEI47897.1| OOP family OmpA-OmpF porin [Proteus mirabilis ATCC 29906]
Length = 368
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 58/122 (47%), Gaps = 12/122 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGS---WLEKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + S++ + L+ L + ++ ++ G+ D +GS+N ++ L
Sbjct: 238 TLRSDVLFNYNKSSLKAEGQEALNGLYNELANIDPTQGRVVVIGYTDRIGSQNYNLPLSE 297
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
+RA +V +Y V++GI A+ + GKE P + A A +RR + ++
Sbjct: 298 KRAQSVVDYLVSKGIPANSISAEGRGKENPVTGNTCDNVKARAALIDCLAPDRRVEIEIQ 357
Query: 155 GC 156
G
Sbjct: 358 GT 359
>gi|6012949|emb|CAB57308.1| putative outer-membrane protein A [Pectobacterium carotovorum]
Length = 367
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 70/167 (41%), Gaps = 18/167 (10%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
+L ++ + G D+ + +P + + E ++ V F+ + +++ Q
Sbjct: 193 MLMSVGLSYRFGQDDRVAPVVAPAPTPAPAPVVETKRFTLKSDVLFNFNKATLKAEGQQS 252
Query: 69 LSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
L L + L + D ++ G +D LGS + AL +RA +V +Y V++GI A+++
Sbjct: 253 LDQLYTQLSSLDPKDGSVVVLGFSDRLGSEQYNQALSEKRAQSVVDYLVSKGIPANKVSA 312
Query: 126 TSYGKEMPS----VYGHDEDAYAK-----------NRRAIVFLKGCR 157
GK P + A +RR + +KG +
Sbjct: 313 RGLGKSQPVTGSTCDNVYKQGRAATKAQLIDCLAPDRRVEIEVKGIK 359
>gi|320538203|ref|ZP_08038098.1| OmpA family protein [Treponema phagedenis F0421]
gi|1399286|gb|AAB03251.1| MotB [Treponema phagedenis]
gi|320145020|gb|EFW36741.1| OmpA family protein [Treponema phagedenis F0421]
Length = 238
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 41/127 (32%), Gaps = 8/127 (6%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIR-PADIQVLSNLGSW---LEKHDCDFLIEGHAD 90
+ +S + S+ FF S + + L ++ + E F +EGH
Sbjct: 106 IAVTSDERGLVISLAADAFFHRDSSDLDIEETRESLLHIARFLSDKELEGRRFRVEGHTS 165
Query: 91 ----ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
L +RA V +Y G SR V Y P + A N
Sbjct: 166 TSEVAASKEIDDWQLSSQRAINVLHYLTDFGAEESRFSVAGYADTRPKASNDTAEGRAYN 225
Query: 147 RRAIVFL 153
RR + +
Sbjct: 226 RRVDIII 232
>gi|227329084|ref|ZP_03833108.1| outer membrane protein A [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 361
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/161 (21%), Positives = 68/161 (42%), Gaps = 12/161 (7%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
+L ++ + G D+ + +P + + E ++ V F+ + +++ Q
Sbjct: 193 MLMSVGLSYRFGQDDRVAPVVAPAPTPAPAPVVETKRFTLKSDVLFNFNKATLKAEGQQS 252
Query: 69 LSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
L L + L + D ++ G D LGS + L +RA +V +Y V++GI A+++
Sbjct: 253 LDQLYTQLSSLDPKDGSVVVLGFTDRLGSEQYNQGLSEKRAQSVVDYLVSKGIPANKVSA 312
Query: 126 TSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLKGCR 157
GK P + A +RR + +KG +
Sbjct: 313 RGLGKSQPVTGSTCDNVKPRAALIDCLAPDRRVEIEVKGIK 353
>gi|149191161|ref|ZP_01869419.1| hypothetical protein VSAK1_02239 [Vibrio shilonii AK1]
gi|148834999|gb|EDL51978.1| hypothetical protein VSAK1_02239 [Vibrio shilonii AK1]
Length = 305
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 34/73 (46%)
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
LI+G+ D G +++ + +R V +FV G+S +++ +G P E
Sbjct: 230 VKILIDGYTDNSGDSVANLQISKQRGSDVAQWFVENGVSKKMIEIRGHGDRYPKYDNTTE 289
Query: 141 DAYAKNRRAIVFL 153
+ KNRR + L
Sbjct: 290 EGRDKNRRVEIRL 302
>gi|56697920|ref|YP_168291.1| OmpA family protein [Ruegeria pomeroyi DSS-3]
gi|56679657|gb|AAV96323.1| OmpA family protein [Ruegeria pomeroyi DSS-3]
Length = 211
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 4/138 (2%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
G L+ L ++F+ + + F S + QVL+ W+ +
Sbjct: 34 GNATLNNTQMMNGERSYTQVLADRFAREIPTQINFAFDSAELDATAQQVLTLQADWIRQF 93
Query: 80 D-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT-SYGKEMPSVYG 137
F + GH D +GS + +LG+RRA AV ++F +RGIS SR++ SYG+ P V
Sbjct: 94 PEVRFRVYGHTDAVGSSGYNKSLGMRRARAVVSFFASRGISRSRLEAVVSYGETQPLVP- 152
Query: 138 HDEDAYAKNRRAIVFLKG 155
+ +NRR + + G
Sbjct: 153 -TGERERRNRRTVTQVSG 169
>gi|260889292|ref|ZP_05900555.1| outer membrane protein, porin F [Leptotrichia hofstadii F0254]
gi|260860703|gb|EEX75203.1| outer membrane protein, porin F [Leptotrichia hofstadii F0254]
Length = 269
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 58/146 (39%), Gaps = 10/146 (6%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG---------DSVFFDTSSYSIRPADI 66
++ + + + ++ + + E + + + + F +S ++
Sbjct: 116 VTAASAQSEAEQTTATVSEIQEKPINNPQKVQISKSEIITLRSNDLNFQKNSTDLKKEAY 175
Query: 67 QVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK-V 125
VL ++ ++EK+D I G+ D+ G + + L LRRA V + G+S R+ +
Sbjct: 176 PVLRDIKDYIEKNDFLVSIIGYTDKSGVSSYNKRLSLRRAEKVSLKLIELGLSKDRVVDL 235
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIV 151
G+ P E+ NRR
Sbjct: 236 IGRGESNPIKTNDTEEGREGNRRVEF 261
>gi|309973370|gb|ADO96571.1| Outer membrane protein P5 [Haemophilus influenzae R2846]
Length = 359
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 54/138 (39%), Gaps = 10/138 (7%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG-SWLEKHDCDFLIEGH 88
+ + + + S+ V F +++P L ++ + + G+
Sbjct: 222 QGEAPVVAAPEMVSKTFSLNSDVTFAFGKANLKPQAQATLDSVYGEISQVKSAKVAVAGY 281
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY--- 143
D +GS ++ L RA +V NYFVA+G++A + T YG+ P
Sbjct: 282 TDRIGSDAFNVKLSQERADSVANYFVAKGVAADAISATGYGEANPVTGATCDQVKGRKAL 341
Query: 144 ----AKNRRAIVFLKGCR 157
A +RR + + G +
Sbjct: 342 IACLAPDRRVEIAVNGTK 359
>gi|323700140|ref|ZP_08112052.1| OmpA/MotB domain protein [Desulfovibrio sp. ND132]
gi|323460072|gb|EGB15937.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans ND132]
Length = 273
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/124 (23%), Positives = 49/124 (39%), Gaps = 14/124 (11%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHA-------------- 89
S+ S+ F Y++ P L LE+ L+ GH
Sbjct: 109 QILSINASLLFGPDGYTLSPEGRATLDRFLPLLEQVKYPLLLAGHTSDLRDELGMNYQPG 168
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D+ + + S L L R A++ Y + +G+S ++V +GK P + A+NRR
Sbjct: 169 DDSRNPDLSWKLSLNRTLAIYRYLLDKGMSPDMLRVEGFGKYRPHYPPDTPENRARNRRV 228
Query: 150 IVFL 153
+ L
Sbjct: 229 DIVL 232
>gi|89069954|ref|ZP_01157287.1| OmpA domain protein [Oceanicola granulosus HTCC2516]
gi|89044508|gb|EAR50636.1| OmpA domain protein [Oceanicola granulosus HTCC2516]
Length = 298
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 42/136 (30%), Gaps = 2/136 (1%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
+P + E V + F+T S + P L L +
Sbjct: 159 AAAVSIDAAEAPAVTGGLGAELEARGHVVLGDLDFETGSARLGPGSFASLDALARYLAAA 218
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYG 137
++ GH D GS +I+L RRA V +A +++ G P
Sbjct: 219 PARRVVLVGHTDSQGSLAGNISLSRRRADQVRTRLIAEHGTDPAQLTADGVGYLAPVASN 278
Query: 138 HDEDAYAKNRRAIVFL 153
+ NRR L
Sbjct: 279 LTPEGREANRRVEAVL 294
>gi|255535532|ref|YP_003095903.1| membrane-bound proton-translocating pyrophosphatase
[Flavobacteriaceae bacterium 3519-10]
gi|255341728|gb|ACU07841.1| Pyrophosphate-energized proton pump [Flavobacteriaceae bacterium
3519-10]
Length = 912
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELG 93
L + ++ + S ++++F + S ++P L+NL + H + G+ D+ G
Sbjct: 789 LEDQAVLDPNSWYTIENLYFQSGSSDLKPGAENALANLAEIMNDHPNVRIKLGGYTDDTG 848
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY-GHDEDAYAKNRRAIVF 152
+ ++++ L RA + GI+A R++ YG P ++ A+NRR V
Sbjct: 849 NADTNLKLSNLRAQTTKLKLLEMGIAADRIETEGYGPLFPVCEANDTDECKAQNRRIDVR 908
Query: 153 L 153
+
Sbjct: 909 V 909
>gi|308050234|ref|YP_003913800.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
gi|307632424|gb|ADN76726.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
Length = 204
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 5/141 (3%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPAD---IQVLSN 71
+ ++ +P + L +S++ S+ FD+ S +RP+ +Q L +
Sbjct: 56 STATPANTRGLVRVKTPQGDTTVAQLPA-LASTIDLSIEFDSGSARLRPSSLALVQTLGD 114
Query: 72 LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGK 130
+ + FLI GH D G ++ L LRRA V +Y + + ++KV +G+
Sbjct: 115 ALTDPRFNGQAFLIAGHTDADGDEEYNLGLSLRRANTVRDYLLQHTSLTPDQLKVVGFGE 174
Query: 131 EMPSVYGHDEDAYAKNRRAIV 151
P H+ +NRR V
Sbjct: 175 TTPLASNHERQGKQQNRRVEV 195
>gi|170702768|ref|ZP_02893624.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
gi|170132317|gb|EDT00789.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
Length = 222
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 1/110 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLR 104
++ F T ++ PA L L S E + GH D +G+ +++AL R
Sbjct: 112 VNLAGDALFATGLATLTPAARASLDKLLSEREDRTYTQVTVTGHTDSVGNDAANLALSKR 171
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RA V Y A G+ A + V+ G P + A NRR + L+
Sbjct: 172 RAETVAGYLKAHGLKAQTVSVSGRGSADPVASNATAEGRASNRRVDISLQ 221
>gi|261415252|ref|YP_003248935.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261371708|gb|ACX74453.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302325746|gb|ADL24947.1| OmpA family protein [Fibrobacter succinogenes subsp. succinogenes
S85]
Length = 654
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 46/135 (34%), Gaps = 1/135 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
K ++ ++ + + V F L+ L + L +
Sbjct: 449 TTSQAGGKPAAQGNSSKNAADKTVLEKFILQGVTFGVGQSKFTRESSDGLNRLAAHLRNY 508
Query: 80 DCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ I H D L S L L+RA V +Y V G+S + T G + P V
Sbjct: 509 NGKTIEIVSHTDNLDRPERSRVLALKRAEEVKSYLVMAGLSGQDIIATGKGGDEPLVPNT 568
Query: 139 DEDAYAKNRRAIVFL 153
D KN R VF+
Sbjct: 569 TPDNRMKNNRIEVFV 583
>gi|254440394|ref|ZP_05053888.1| OmpA family protein [Octadecabacter antarcticus 307]
gi|198255840|gb|EDY80154.1| OmpA family protein [Octadecabacter antarcticus 307]
Length = 315
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 40/115 (34%), Gaps = 6/115 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS-----RNSSIA 100
S+G F + S + ++ LG+ ++ GH D + +
Sbjct: 199 VSLGAGGAFPSGSADLTQQASIIIEELGAVTSDPASRVIVSGHTDNVPISFGALYRDNWD 258
Query: 101 LGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L RA +V A R M S+G+ P + +NRR + ++
Sbjct: 259 LAAARAASVVQAIEATNPVQGRTMSAVSFGQTQPIADNFTAEGREQNRRIEIEIE 313
>gi|163786090|ref|ZP_02180538.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Flavobacteriales bacterium ALC-1]
gi|159877950|gb|EDP72006.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Flavobacteriales bacterium ALC-1]
Length = 627
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 51/126 (40%), Gaps = 4/126 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHAD 90
D + ++ + ++++FD + + I+P + L + + + + H D
Sbjct: 500 DAEEIVTDDEDGNTYIELENIYFDFAKWDIKPQAARTLDILVALLKKYPRMEIQLGAHTD 559
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV---YGHDEDAYAKNR 147
++ L +RA A Y V GIS +R+ YG+ P V E ++ NR
Sbjct: 560 SRAGFEFNMDLSHKRAKATLEYLVENGISRARLTSKGYGETQPLVPCGDNCTETEFSINR 619
Query: 148 RAIVFL 153
R +
Sbjct: 620 RCEFLI 625
>gi|157165686|ref|YP_001466588.1| OmpA family protein [Campylobacter concisus 13826]
Length = 219
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 8/132 (6%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV-LSNLGSWLEKHDCDFL-- 84
+S + ++ F + ++ FD S I D ++ L +G + K +
Sbjct: 66 TASGAPEITMEESEDGFIVRLPAAMLFDKDSAEISGEDAKLFLKRIGMIIAKMPNEVKTD 125
Query: 85 IEGHADELG-----SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
I G+ D ++ L RA +V V+ G+ R+ + P
Sbjct: 126 IIGYTDNTNPSKDSIYKNNWQLSTARALSVLEELVSDGVPQERLITSGRASFDPIASNST 185
Query: 140 EDAYAKNRRAIV 151
++ AKN R +
Sbjct: 186 DEGRAKNNRVEI 197
>gi|189405293|ref|ZP_02814514.2| OmpA family protein [Escherichia coli O157:H7 str. EC869]
gi|191169055|ref|ZP_03030818.1| OmpA family protein [Escherichia coli B7A]
gi|193064020|ref|ZP_03045105.1| OmpA family protein [Escherichia coli E22]
gi|194439333|ref|ZP_03071411.1| OmpA family protein [Escherichia coli 101-1]
gi|256019576|ref|ZP_05433441.1| putative outer membrane lipoprotein [Shigella sp. D9]
gi|301026824|ref|ZP_07190226.1| OmpA family protein [Escherichia coli MS 196-1]
gi|332280700|ref|ZP_08393113.1| outer membrane lipoprotein [Shigella sp. D9]
gi|43146|emb|CAA25961.1| unnamed protein product [Escherichia coli]
gi|189370879|gb|EDU89295.1| OmpA family protein [Escherichia coli O157:H7 str. EC869]
gi|190900896|gb|EDV60682.1| OmpA family protein [Escherichia coli B7A]
gi|192929255|gb|EDV82864.1| OmpA family protein [Escherichia coli E22]
gi|194421695|gb|EDX37704.1| OmpA family protein [Escherichia coli 101-1]
gi|299879570|gb|EFI87781.1| OmpA family protein [Escherichia coli MS 196-1]
gi|315615303|gb|EFU95938.1| ompA family protein [Escherichia coli 3431]
gi|323159124|gb|EFZ45117.1| ompA family protein [Escherichia coli E128010]
gi|323184520|gb|EFZ69894.1| ompA family protein [Escherichia coli 1357]
gi|332103052|gb|EGJ06398.1| outer membrane lipoprotein [Shigella sp. D9]
gi|332344474|gb|AEE57808.1| outer membrane protein OmpA [Escherichia coli UMNK88]
Length = 127
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 2/123 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF-LIEGHADE 91
+ +S + D++ F + Y + P Q + + + L ++GH D
Sbjct: 2 QSYGFTESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDN 61
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + + L L+RA V + + G + GK+ P A+NRR
Sbjct: 62 YGEDSYNEGLSLKRANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVA 121
Query: 151 VFL 153
V +
Sbjct: 122 VVI 124
>gi|222475318|ref|YP_002563735.1| Peptidoglycan-associated lipoprotein precursor [Anaplasma marginale
str. Florida]
gi|222419456|gb|ACM49479.1| Peptidoglycan-associated lipoprotein precursor [Anaplasma marginale
str. Florida]
Length = 255
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 14/156 (8%)
Query: 7 FIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADI 66
++ L + +++G + D V FS+ + V+FD + Y I+ +
Sbjct: 24 WLALCFLASFAVTGCGLFSKEKVGMDIVGV------PFSAGRVEKVYFDFNKYEIKGSGK 77
Query: 67 QVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMK 124
+VL L ++ LI GH D G+ ++ALG RRA AV + + S + R+
Sbjct: 78 KVLLGLVERMKADKRSTLLIIGHTDSRGTEEYNLALGERRANAVKEFILGCDRSLSPRIS 137
Query: 125 VTSYGKEMP--SVYGHD----EDAYAKNRRAIVFLK 154
S GK P VY D E A+A+NRR ++ ++
Sbjct: 138 TQSRGKAEPEVLVYSSDFKEAEKAHAQNRRVVLIVE 173
>gi|90579158|ref|ZP_01234968.1| Putative sodium-type flagellar protein MotY [Vibrio angustum S14]
gi|90439991|gb|EAS65172.1| Putative sodium-type flagellar protein MotY [Vibrio angustum S14]
Length = 297
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 2/113 (1%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIA 100
F + + +S ++ Q L+ + ++ D L+ D + S
Sbjct: 179 GFEDIAFSVLHYSENSDTLNKISQQRLAQIADFVRYSDDIDLVLVAAFNDSIAGTTESQE 238
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ RRA + YF + G+ A R++V +YGK P NRR ++ L
Sbjct: 239 MSERRAEKLRQYFQSLGLPAERVQVEAYGKRRPIADNSTPMGRNLNRRVVISL 291
>gi|152980650|ref|YP_001353771.1| flagellar motor protein MotD [Janthinobacterium sp. Marseille]
gi|151280727|gb|ABR89137.1| MotB chemotaxis protein [Janthinobacterium sp. Marseille]
Length = 259
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 45/131 (34%), Gaps = 4/131 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ + S + SV F + L + L+ D D +E
Sbjct: 112 APLVSQGKVRVTQTNRGVSVEINASVLFAPGEAKLNAQSEAALRAVAQVLKDVDNDIQVE 171
Query: 87 GHADE----LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
GH D S+ L RA +V F+A G++ R+ +G +P +
Sbjct: 172 GHTDNTPINNTMFPSNWELSAVRASSVVRLFLANGVAEKRLVAMGHGANLPVDSNDTTEG 231
Query: 143 YAKNRRAIVFL 153
+NRR + +
Sbjct: 232 RLRNRRVQLMI 242
>gi|225872880|ref|YP_002754337.1| outer membrane protein A [Acidobacterium capsulatum ATCC 51196]
gi|225792630|gb|ACO32720.1| outer membrane protein A [Acidobacterium capsulatum ATCC 51196]
Length = 263
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 46/137 (33%), Gaps = 2/137 (1%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-E 77
S + +S + + S + + +V F + + D L L S +
Sbjct: 84 SANQSAQQAMSQTNALSGVVSNLDNYQPVAQINVTFGFNKAVLSRGDKSKLDQLASQMGS 143
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVY 136
+ G D G++ + L RRA AV Y A + + V GK
Sbjct: 144 TKGYIVALTGSTDSTGTKAYNDQLSQRRAQAVERYLAATYHVPPYKFYVLGLGKADEVAS 203
Query: 137 GHDEDAYAKNRRAIVFL 153
AKNRR V L
Sbjct: 204 NRTASGRAKNRRVQVQL 220
>gi|228471996|ref|ZP_04056764.1| OmpA family protein [Capnocytophaga gingivalis ATCC 33624]
gi|228276608|gb|EEK15321.1| OmpA family protein [Capnocytophaga gingivalis ATCC 33624]
Length = 278
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 6/114 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSS----IA 100
S+ D + F + SY++ P +VL + K D +F++EGH D + +N+
Sbjct: 144 VSISDKMLFSSGSYNVTPRAREVLGKVAKVVNNKPDFEFMVEGHTDNVPIKNTCIKDNWD 203
Query: 101 LGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L + RA AV ++ASRM G+ +P D A NRR + +
Sbjct: 204 LSVLRATAVVRILQNDFGVTASRMTAAGRGEYVPVTSNASADGRALNRRTRIVV 257
>gi|332704092|ref|ZP_08424180.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay]
gi|332554241|gb|EGJ51285.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay]
Length = 253
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 45/130 (34%), Gaps = 5/130 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ + SS + V FD S +++P ++++ + L++ + +I
Sbjct: 113 QDVDVKDLAVVSSDRNGALLRVQAGAMFDPGSAALKPEAVKIIDKAVTILKERNFSVVIR 172
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISA-----SRMKVTSYGKEMPSVYGHDED 141
GH D ++ + A I +R+K Y P V E+
Sbjct: 173 GHTDSHIVHSAQFPSNWELSAARAAASARLVIERGAIDTNRIKAIGYADSRPLVPNSTEE 232
Query: 142 AYAKNRRAIV 151
A NRR
Sbjct: 233 NRAFNRRVEF 242
>gi|289764553|ref|ZP_06523931.1| outer membrane porin F [Fusobacterium sp. D11]
gi|289716108|gb|EFD80120.1| outer membrane porin F [Fusobacterium sp. D11]
Length = 311
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 2/103 (1%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALG 102
++ + FD Y +RP +VL NL L++ D F I+GH D + L
Sbjct: 205 LLITLDSGILFDVDKYDVRPEAEEVLKNLAIVLKEADIKAFEIDGHTDSDAGDKHNQILS 264
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
RA AV N+ ++GI+A + + YGK P + K
Sbjct: 265 ENRANAVKNFLTSQGITAE-ITIKGYGKTRPIASNDTPEGKQK 306
>gi|89094432|ref|ZP_01167372.1| chemotaxis protein MotB [Oceanospirillum sp. MED92]
gi|89081324|gb|EAR60556.1| chemotaxis protein MotB [Oceanospirillum sp. MED92]
Length = 311
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 40/115 (34%), Gaps = 4/115 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
S + + F++ Q+L + L+ +EG D S+
Sbjct: 135 LSIELRSNYLFESGGALPNILADQLLEQIAGMLKDKSNPIHVEGFTDNQQISTDEFPSNW 194
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L RA AV G++ +M YG+ P+ + NRR ++ +
Sbjct: 195 ELSAARAAAVVRLLSQFGVNPEQMAAVGYGEFQPAYSNRTAEGQRLNRRVLIVVS 249
>gi|260582095|ref|ZP_05849889.1| outer membrane protein P5 [Haemophilus influenzae NT127]
gi|260094727|gb|EEW78621.1| outer membrane protein P5 [Haemophilus influenzae NT127]
Length = 350
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 54/138 (39%), Gaps = 10/138 (7%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG-SWLEKHDCDFLIEGH 88
+ + + + S+ V F +++P L ++ + + G+
Sbjct: 213 QGEAPVVAAPEMVSKTFSLNSDVTFAFGKANLKPQAQATLDSVYGEISQVKSAKVAVAGY 272
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY--- 143
D +GS ++ L RA +V NYFVA+G++A + T YG+ P
Sbjct: 273 TDRIGSDAFNVKLSQERADSVANYFVAKGVAADAISATGYGEANPVTGATCDQVKGRKAL 332
Query: 144 ----AKNRRAIVFLKGCR 157
A +RR + + G +
Sbjct: 333 IACLAPDRRVEIAVNGTK 350
>gi|320182481|gb|EFW57375.1| Integral membrane protein YfiB [Shigella boydii ATCC 9905]
Length = 127
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 2/123 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF-LIEGHADE 91
+ +S + D++ F + Y + P Q + + + L ++GH D
Sbjct: 2 QSYGFTESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLTSTGLTHARMDGHTDN 61
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + + L L+RA V + + G + GK+ P A+NRR
Sbjct: 62 YGEDSYNEGLSLKRANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVA 121
Query: 151 VFL 153
V +
Sbjct: 122 VVI 124
>gi|86147194|ref|ZP_01065510.1| outer membrane protein [Vibrio sp. MED222]
gi|85835078|gb|EAQ53220.1| outer membrane protein [Vibrio sp. MED222]
Length = 213
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 53/112 (47%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSI 99
++ + + V V FD + +L NL + LE +F++ G+ D GS + ++
Sbjct: 100 VEGKLAREVLARVTFDFDDDELNQKSRYLLLNLIAKLEHQTPEFIVTGNTDSKGSDSYNL 159
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+LGL+R+ V Y +G++ + V+S G+ P E NRR +
Sbjct: 160 SLGLQRSNVVVGYLKEQGVNIEDLTVSSQGEANPVQSNETESGRHNNRRVDI 211
>gi|253688926|ref|YP_003018116.1| OmpA domain protein transmembrane region-containing protein
[Pectobacterium carotovorum subsp. carotovorum PC1]
gi|251755504|gb|ACT13580.1| OmpA domain protein transmembrane region-containing protein
[Pectobacterium carotovorum subsp. carotovorum PC1]
Length = 366
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/161 (21%), Positives = 68/161 (42%), Gaps = 12/161 (7%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
+L ++ + G D+ + +P + + E ++ V F+ + +++ Q
Sbjct: 198 MLMSVGLSYRFGQDDRVAPVVAPAPTPAPAPVVETKRFTLKSDVLFNFNKATLKAEGQQS 257
Query: 69 LSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
L L + L + D ++ G D LGS + L +RA +V +Y V++GI A+++
Sbjct: 258 LDQLYTQLSSLDPKDGSVVVLGFTDRLGSEQYNQGLSEKRAQSVVDYLVSKGIPANKVSA 317
Query: 126 TSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLKGCR 157
GK P + A +RR + +KG +
Sbjct: 318 RGLGKSQPVTGSTCDNVKPRAALIDCLAPDRRVEIEVKGIK 358
>gi|222106979|ref|YP_002547770.1| OmpA-type porin [Agrobacterium vitis S4]
gi|221738158|gb|ACM39054.1| OmpA-type porin [Agrobacterium vitis S4]
Length = 511
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 42/131 (32%), Gaps = 5/131 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ +++ S + + +S FDT S ++ +L +G L ++
Sbjct: 340 QPEVEKKLVSLSDANGRLRVRINNSGLFDTGSADVKGQFRDLLQRIGGALAAEKFRAVVI 399
Query: 87 GHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
G+ D + S+ L RA AV + + P +
Sbjct: 400 GYTDNVPIKTVQFPSNWHLSEARAKAVGEILSS-FTGPDAILTEGRADSDPIAGNDTPEG 458
Query: 143 YAKNRRAIVFL 153
NRR + +
Sbjct: 459 REMNRRTEILV 469
>gi|260779320|ref|ZP_05888212.1| putative sodium-type flagellar protein MotY precursor [Vibrio
coralliilyticus ATCC BAA-450]
gi|260605484|gb|EEX31779.1| putative sodium-type flagellar protein MotY precursor [Vibrio
coralliilyticus ATCC BAA-450]
Length = 303
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLE--KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FD + L L ++L K+ LI+G+ D +GS +++ + +RA V
Sbjct: 181 FDLGQRHLTVQQTNTLGALYTYLRADKNISKVLIDGYTDNVGSNVANLTISKQRADLVAK 240
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G+ A+R++V S+G P + AKNRR + L
Sbjct: 241 ALKKSGVEAARIEVRSHGSRYPIASNSTPEGQAKNRRVTLRL 282
>gi|56416952|ref|YP_154026.1| hypothetical protein AM854 [Anaplasma marginale str. St. Maries]
gi|254995132|ref|ZP_05277322.1| hypothetical protein AmarM_03987 [Anaplasma marginale str.
Mississippi]
gi|255003301|ref|ZP_05278265.1| hypothetical protein AmarPR_03517 [Anaplasma marginale str. Puerto
Rico]
gi|255004426|ref|ZP_05279227.1| hypothetical protein AmarV_03742 [Anaplasma marginale str.
Virginia]
gi|56388184|gb|AAV86771.1| hypothetical protein AM854 [Anaplasma marginale str. St. Maries]
gi|295243859|gb|ADF87315.1| peptidoglycan-associated lipoprotein precursor [Anaplasma
marginale]
Length = 236
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 72/156 (46%), Gaps = 14/156 (8%)
Query: 7 FIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADI 66
++ L + +++G + D V FS+ + V+FD + Y I+ +
Sbjct: 5 WLALCFLASFAVTGCGLFSKEKVGMDIVGV------PFSAGRVEKVYFDFNKYEIKGSGK 58
Query: 67 QVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMK 124
+VL L ++ LI GH D G+ ++ALG RRA AV + + S + R+
Sbjct: 59 KVLLGLVERMKADKRSTLLIIGHTDSRGTEEYNLALGERRANAVKEFILGCDRSLSPRIS 118
Query: 125 VTSYGKEMP--SVYGHD----EDAYAKNRRAIVFLK 154
S GK P VY D E A+A+NRR ++ ++
Sbjct: 119 TQSRGKAEPEVLVYSSDFKEAEKAHAQNRRVVLIVE 154
>gi|86130870|ref|ZP_01049469.1| OmpA family protein [Dokdonia donghaensis MED134]
gi|85818281|gb|EAQ39441.1| OmpA family protein [Dokdonia donghaensis MED134]
Length = 326
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 49/129 (37%), Gaps = 7/129 (5%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
L + S+ + + FD+ S+++ + + LGS + + LIEGH D
Sbjct: 183 GKGLTVEQRDGKVYVSLENKLLFDSGSWTVGTNGTKAVKQLGSVLADNPEIAVLIEGHTD 242
Query: 91 ELGSR-----NSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+ + L +RA ++ N + I + G+ P + A
Sbjct: 243 NVPYGGSGNLQGNWDLSAKRATSIVNILRQNKRIDPKNLTAAGRGEYAPVAENDTPENKA 302
Query: 145 KNRRAIVFL 153
KNRR V L
Sbjct: 303 KNRRIEVIL 311
>gi|19881377|gb|AAM00931.1|AF491823_1 hemagglutinin antigen [Avibacterium paragallinarum]
Length = 344
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 10/120 (8%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRR 105
++ V F ++RP VL + + + + G+ D +GS +++ L RR
Sbjct: 224 ALNSDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDVAGYTDRIGSEAANLKLSQRR 283
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLKGC 156
A V NY V++G++ + T YG+ P A +RR + +KG
Sbjct: 284 ADTVANYLVSKGVAQEVISSTGYGEANPVTGAKCDTVKGRKALIACLADDRRVEISVKGE 343
>gi|261879154|ref|ZP_06005581.1| OmpA family protein [Prevotella bergensis DSM 17361]
gi|270334253|gb|EFA45039.1| OmpA family protein [Prevotella bergensis DSM 17361]
Length = 284
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 45/119 (37%), Gaps = 11/119 (9%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADE---------LGSR 95
S+ D++ + + SY I + L + ++ D D LIEG+ D + +
Sbjct: 147 ISLADNMLYKSGSYEINDRAEETLGKIAKIIMDYKDYDVLIEGNTDNVPINTSSELMKNI 206
Query: 96 NSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L RA +V Y + R+ G+ P +NRR + +
Sbjct: 207 RNNWDLSALRASSVVQYLIDHFGVAPGRLTAGGRGEFNPIASNDTALGKQRNRRTQIII 265
>gi|113968724|ref|YP_732517.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-4]
gi|113883408|gb|ABI37460.1| OmpA/MotB domain protein [Shewanella sp. MR-4]
Length = 202
Score = 65.6 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/188 (20%), Positives = 60/188 (31%), Gaps = 28/188 (14%)
Query: 1 MQYSTIFI---ILSAITMM------SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD- 50
M+ +F+ +L+ +M ++ D D V+ + G
Sbjct: 1 MKTLILFMSVALLAGCSMRDTVNIEEMTTTQAYDLSDKDGDGVIEARERCNDTAKGAGTD 60
Query: 51 ----------------SVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELG 93
+V F S I P + + + + IEGH G
Sbjct: 61 NYGCGQVKAINERKEINVLFPNDSAYIAPEYYPQIEEIAMFLRQYPTTKVTIEGHTSRTG 120
Query: 94 SRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ + L RA AV R I SR+ YG P V H DA +NRR +
Sbjct: 121 TDERNAVLSQERADAVTAVLADRFSIDRSRLTAIGYGSSRPLVLEHTPDAETRNRRVVAE 180
Query: 153 LKGCRANT 160
+ G T
Sbjct: 181 VTGDDTTT 188
>gi|256026544|ref|ZP_05440378.1| Outer membrane porin F [Fusobacterium sp. D11]
Length = 391
Score = 65.2 bits (157), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 2/103 (1%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALG 102
++ + FD Y +RP +VL NL L++ D F I+GH D + L
Sbjct: 285 LLITLDSGILFDVDKYDVRPEAEEVLKNLAIVLKEADIKAFEIDGHTDSDAGDKHNQILS 344
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
RA AV N+ ++GI+A + + YGK P + K
Sbjct: 345 ENRANAVKNFLTSQGITAE-ITIKGYGKTRPIASNDTPEGKQK 386
>gi|313203560|ref|YP_004042217.1| ompa/motb domain protein [Paludibacter propionicigenes WB4]
gi|312442876|gb|ADQ79232.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4]
Length = 778
Score = 65.2 bits (157), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 58/139 (41%), Gaps = 5/139 (3%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
G+ ++D + +++ E +++ ++ + + IRP L +L + L+ +
Sbjct: 597 GVKSIDVTSGAMKDLISNKQELEVNDRWKLNNIHYNFNKWDIRPDATPTLDSLITLLKIY 656
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ + D G+ + L +RA +V Y V GI +R+ +G+ D
Sbjct: 657 PIKIELGSYTDSRGTSQYNDTLSQKRAESVVAYLVKHGIDRNRLIAVGHGERNILNRCID 716
Query: 140 -----EDAYAKNRRAIVFL 153
E+ + NRR V +
Sbjct: 717 GVSCSENEHQVNRRTEVKV 735
>gi|126726180|ref|ZP_01742022.1| OmpA/MotB family protein [Rhodobacterales bacterium HTCC2150]
gi|126705384|gb|EBA04475.1| OmpA/MotB family protein [Rhodobacterales bacterium HTCC2150]
Length = 305
Score = 65.2 bits (157), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 55/138 (39%), Gaps = 6/138 (4%)
Query: 26 TKISSPDTVLNESSLQ----EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD- 80
+ +PD V ++ V + + F S + D L NL + L+++
Sbjct: 168 PSVLTPDPVSPKTETPVSTVSDDGVLVLEDLLFQPGSADLTAGDYASLENLAALLKENPE 227
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHD 139
++ GH D +G+ +IA+ +RA +V V + + R+ G P
Sbjct: 228 KKAILVGHTDAVGALEVNIAISEKRAISVMTRMVEQYEISADRLSAKGVGFLAPRASNDT 287
Query: 140 EDAYAKNRRAIVFLKGCR 157
++ KNRR + + R
Sbjct: 288 DEGRQKNRRVVAIMTTTR 305
>gi|271501514|ref|YP_003334540.1| OmpA domain-containing protein transmembrane region-containing
protein [Dickeya dadantii Ech586]
gi|270345069|gb|ACZ77834.1| OmpA domain protein transmembrane region-containing protein
[Dickeya dadantii Ech586]
Length = 354
Score = 65.2 bits (157), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPA---DIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P + L S L+ D ++ G D LGS + L
Sbjct: 224 TLKSDVLFNFNKATLKPEGQRSLDQLYTQLSTLDPKDGSVVVLGFTDRLGSDQYNQTLSA 283
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
+RA V +Y V +GI ++++ GK P + A A +RR + +K
Sbjct: 284 KRAQTVVDYLVHKGIPSNKISARGMGKANPVTGSTCANVKARAALIECLSPDRRVEIEVK 343
Query: 155 GCR 157
G +
Sbjct: 344 GIK 346
>gi|254515071|ref|ZP_05127132.1| flagellar motor protein [gamma proteobacterium NOR5-3]
gi|219677314|gb|EED33679.1| flagellar motor protein [gamma proteobacterium NOR5-3]
Length = 216
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 51/130 (39%), Gaps = 10/130 (7%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS----WLEKHDCDFLIE 86
+ + + SV F +S ++ ++L L + +L+++D +I
Sbjct: 70 AGPLSSGRITINDGRIGISGSVLFALNSDRLQEEGRELLVTLAAPLEVFLQENDQLLMIS 129
Query: 87 GHADE------LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
G D+ + + L +RA V VA G+ A R+ ++G + P DE
Sbjct: 130 GFTDDLPIQSGNLNFADNWELSAQRALTVTRELVAAGLPADRVFAAAFGDQQPVAPNLDE 189
Query: 141 DAYAKNRRAI 150
A NRR
Sbjct: 190 SGRALNRRVE 199
>gi|156974655|ref|YP_001445562.1| hypothetical protein VIBHAR_02373 [Vibrio harveyi ATCC BAA-1116]
gi|156526249|gb|ABU71335.1| hypothetical protein VIBHAR_02373 [Vibrio harveyi ATCC BAA-1116]
Length = 208
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
D + + + S + V F S +I P + +S+L ++L+++
Sbjct: 56 DLCPGTPEGSEIDNDGCGKYAKSSQQMQIRVLFANDSSAIEPVFVNQISDLSNFLKEYPT 115
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++G+ G+ ++AL RRA +V + GIS R+++ +G+ + G DE
Sbjct: 116 TSIELQGYTSITGTDEYNLALSKRRAESVRQELINNGISPERLRIVGFGETNLASQGTDE 175
Query: 141 DAYAKNRRAIVFLKGCRA 158
++A NRR + G +
Sbjct: 176 TSHALNRRVTATVVGYKG 193
>gi|73539729|ref|YP_294249.1| OmpA [Ralstonia eutropha JMP134]
gi|72117142|gb|AAZ59405.1| OmpA [Ralstonia eutropha JMP134]
Length = 591
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 53/137 (38%), Gaps = 10/137 (7%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
+G + + +P+ + + + +Q++ V S ++ L
Sbjct: 163 AGANGQFASGSSVLTPEARVAFTEIAQQYAYPVQSR-QLGPQSTPQDRQAVEGLK----- 216
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
L+ GH D+ GS + L +RA AV F G++ S++ G+ MP
Sbjct: 217 ----SRRILLIGHTDDTGSSRLNADLSEQRARAVAALFRDAGVAESQLYYQGAGETMPLA 272
Query: 136 YGHDEDAYAKNRRAIVF 152
DE AKNRR +
Sbjct: 273 DNRDEAGRAKNRRVEIV 289
>gi|46580633|ref|YP_011441.1| motB protein [Desulfovibrio vulgaris str. Hildenborough]
gi|120602060|ref|YP_966460.1| OmpA/MotB domain-containing protein [Desulfovibrio vulgaris DP4]
gi|46450052|gb|AAS96701.1| motB protein, putative [Desulfovibrio vulgaris str. Hildenborough]
gi|120562289|gb|ABM28033.1| OmpA/MotB domain protein [Desulfovibrio vulgaris DP4]
gi|311234364|gb|ADP87218.1| OmpA/MotB domain protein [Desulfovibrio vulgaris RCH1]
Length = 244
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 55/134 (41%), Gaps = 6/134 (4%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLI 85
++ + V+ + + V V F + + P +VL+ L ++ + + + I
Sbjct: 106 TVNGVEGVIGAVFDEGVITLRVPSEVLFAPGAVELAPGADRVLATLKDLFIRRREQNINI 165
Query: 86 EGHADELGS-----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+G D++ + + R+ V YF+ GI +R+ T G+ P +
Sbjct: 166 KGFTDDVQPSANARFKDNWEVSALRSVNVLRYFLGAGIEPARLTATGLGELDPLFPNTSD 225
Query: 141 DAYAKNRRAIVFLK 154
+ A+NRR L+
Sbjct: 226 ENRARNRRVEFVLE 239
>gi|293390327|ref|ZP_06634661.1| outer membrane protein A [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|290950861|gb|EFE00980.1| outer membrane protein A [Aggregatibacter actinomycetemcomitans
D7S-1]
Length = 356
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 54/138 (39%), Gaps = 10/138 (7%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGH 88
+ + ++ V F + +++P + L + + + ++ + + G+
Sbjct: 219 GQGSAPVIAPEVVNKVFNLNSDVTFAFNKANLKPQAQKTLDGISHEIAQVNNANIQVAGY 278
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY--- 143
D +GS + L RRA V NY V++G+S + T YGK P
Sbjct: 279 TDRIGSDAYNQKLSQRRAETVANYLVSKGVSQQAISATGYGKANPVTGNKCDTVKGRKAL 338
Query: 144 ----AKNRRAIVFLKGCR 157
A +RR + + G +
Sbjct: 339 IACLADDRRVEIAVNGTK 356
>gi|193885262|pdb|2ZF8|A Chain A, Crystal Structure Of Moty
Length = 278
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Query: 59 YSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
+ A + LS + ++ + L+ + D +++S +L RRA ++ +YF +
Sbjct: 171 DQLTKASKKRLSQIADYIRHNQDIDLVLVATYTDSTDGKSASQSLSERRAESLRDYFQSL 230
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G+ R++V YGK P KNRR ++ L
Sbjct: 231 GLPEDRIQVQGYGKRRPIADNGSPIGKDKNRRVVISL 267
>gi|149915641|ref|ZP_01904167.1| OmpA/MotB [Roseobacter sp. AzwK-3b]
gi|149810533|gb|EDM70376.1| OmpA/MotB [Roseobacter sp. AzwK-3b]
Length = 218
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 4/142 (2%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
G N++ + S L +F+S V +V F S + A L+ SW+++
Sbjct: 40 GNANMNNVLVMTGEKGYVSDLANRFASEVPSTVNFAFDSAHLDAAARNTLNAQASWIKQF 99
Query: 80 D-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT-SYGKEMPSVYG 137
F + GH D++GS + + LG RRA AV NY + GIS SR++ SYG+ P V
Sbjct: 100 PEVRFRVYGHTDKVGSESYNRHLGQRRANAVVNYLTSHGISRSRLEAVVSYGETQPVVV- 158
Query: 138 HDEDAYAKNRRAIVFLKGCRAN 159
E +NRR + + G A+
Sbjct: 159 -TEGREPRNRRTVTEVTGFVAS 179
>gi|19881365|gb|AAM00925.1|AF491817_1 hemagglutinin antigen [Avibacterium paragallinarum]
Length = 344
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 10/120 (8%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRR 105
++ V F ++RP VL + + + + G+ D +GS +++ L RR
Sbjct: 224 ALNSDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDVAGYTDRIGSEAANLKLSQRR 283
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLKGC 156
A V NY V++G++ + T YG+ P A +RR + +KG
Sbjct: 284 ADTVANYLVSKGVAQEVISSTGYGEANPVTGAKCDTVKGRKALIACLADDRRVEISVKGE 343
>gi|328469328|gb|EGF40274.1| putative sodium-type flagellar protein MotY [Vibrio
parahaemolyticus 10329]
Length = 340
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 3/111 (2%)
Query: 46 SSVGDSVF-FDTSSYSIRPADIQVLSNLGSW--LEKHDCDFLIEGHADELGSRNSSIALG 102
S D V F ++ Q L+ L S+ ++ LI+GH D +G R +++++
Sbjct: 203 SQARDIVLPFQFGQKTLNATQQQTLAALYSYLSVDDRVTKVLIDGHTDNVGPRLTNLSVS 262
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA V + +A G++ + ++V S+G P + AKNRR + L
Sbjct: 263 RLRAQQVADALIAHGVNPNIIEVRSHGDRYPVANNNTAAGQAKNRRVTLRL 313
>gi|91794084|ref|YP_563735.1| OmpA/MotB [Shewanella denitrificans OS217]
gi|91716086|gb|ABE56012.1| OmpA/MotB [Shewanella denitrificans OS217]
Length = 377
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
V FD S I+P + LG ++ +IEGHA +G + +++L RRA AV
Sbjct: 263 KVLFDNDSAVIKPGYYADMEILGDHLVKYPAHTVIIEGHASNVGKPDYNMSLSERRAQAV 322
Query: 110 FNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
+ + ISASR+K YG P + G+ +A+ NRR + G
Sbjct: 323 ATALMTKYGISASRIKSVGYGVTKPKMAGNTAEAHRVNRRIEAIVTGT 370
>gi|197117521|ref|YP_002137948.1| OmpA family outer membrane lipoprotein [Geobacter bemidjiensis Bem]
gi|197086881|gb|ACH38152.1| OmpA family outer membrane lipoprotein [Geobacter bemidjiensis Bem]
Length = 450
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 3/138 (2%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
D + + + + + FD +SY IRP+ I V +G +++++
Sbjct: 313 ATDQAKQIELEAEKKPASTPSVPVAAPLLKATFEFDCNSYKIRPSFIDVGRKIGLFMKRN 372
Query: 80 DCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYG 137
I GHAD GS + ++AL +RA Y + SA R ++ + G P
Sbjct: 373 PQIIAQIHGHADITGSDDHNLALSEKRAVRTKQYLMKMYNLSADRFEIRTMGSSEPIADN 432
Query: 138 HDEDAYAKNRRA-IVFLK 154
E KNRRA ++ LK
Sbjct: 433 TTEVGRKKNRRALVIILK 450
>gi|237729519|ref|ZP_04560000.1| OmpA family protein [Citrobacter sp. 30_2]
gi|226908125|gb|EEH94043.1| OmpA family protein [Citrobacter sp. 30_2]
Length = 160
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 52/137 (37%), Gaps = 2/137 (1%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+ + + + +S + D++ FD + Y +RP + + + S L
Sbjct: 21 APQGKFTPEQIAAMKSYGFTEASGDWSLGLSDTILFDKNDYKLRPESEKQIKEMASKLAA 80
Query: 79 HDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVY 136
+ ++GH D G + + AL L+RA V + + + GK+ P
Sbjct: 81 TGLNHARLDGHTDNYGEDSYNEALSLKRANVVADAWAQGANIPRTNLTTQGLGKKYPIAS 140
Query: 137 GHDEDAYAKNRRAIVFL 153
A+NRR V +
Sbjct: 141 NQTSKGRAENRRVAVVI 157
>gi|189184227|ref|YP_001938012.1| peptidoglycan-associated lipoprotein [Orientia tsutsugamushi str.
Ikeda]
gi|189180998|dbj|BAG40778.1| peptidoglycan-associated lipoprotein [Orientia tsutsugamushi str.
Ikeda]
Length = 204
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 77/152 (50%), Gaps = 6/152 (3%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSV--GDSVFFDTSSYSIRPADI 66
I+ I+ ++ D + + ++ EQF ++ V+F T + +
Sbjct: 49 IVGMISSINAESSDQVTSNNANAQQEEYVDVKHEQFLQAIHGKHKVYFATEKFDLSEESK 108
Query: 67 QVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
+VL +WL+ + +IEGH DE G+R ++ALG +RA AV + V G+S +++
Sbjct: 109 RVLRAQSAWLKNNPDVKIIIEGHCDERGTREYNLALGKKRADAVKQFLVTLGVSRDKIET 168
Query: 126 TSYGKEMP---SVYGHDEDAYAKNRRAIVFLK 154
TSYGK+ P + E+AY NRR++ +K
Sbjct: 169 TSYGKDKPEVEVTKDNKEEAYRLNRRSVTIIK 200
>gi|325529870|gb|EGD06709.1| hypothetical protein B1M_00030 [Burkholderia sp. TJI49]
Length = 214
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 52/142 (36%), Gaps = 10/142 (7%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS----NLGSW 75
+ + + + +V F +S ++P +L L ++
Sbjct: 58 AQQRKSLEQALAGPLAAGRVTLVNGRIGISGNVLFALNSDQLQPEGRDLLKTLAGPLAAY 117
Query: 76 LEKHDCDFLIEGHADELGS------RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
L+ D +I G AD+ + L +RA V + G+ AS + ++G
Sbjct: 118 LKTRDEILMISGFADDQQVRAGNRLFADNWELSAKRALTVTRALIDAGVPASSVFAAAFG 177
Query: 130 KEMPSVYGHDEDAYAKNRRAIV 151
E P D++ AKNRR +
Sbjct: 178 SEQPVSSNADDEGRAKNRRVEI 199
>gi|312131656|ref|YP_003998996.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132]
gi|311908202|gb|ADQ18643.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132]
Length = 418
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F+ S I + + + N+ L+ + + I G+ D GS + L RA V
Sbjct: 315 FEQGSALIDASSQKEVDNIAEILKAYPDVNIKIGGYTDNTGSDEINTKLSAERAANVLAA 374
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V RGI ASR++ YG P E+ ++RR V +
Sbjct: 375 LVDRGIEASRLESEGYGPLHPIADNSTEEGREQDRRIAVRV 415
>gi|147003|gb|AAA24242.1| outer membrane protein II [Escherichia blattae]
Length = 240
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 12/121 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L L + L D ++ G+ D +GS + L
Sbjct: 119 TLKSDVLFNFNKSTLKPEGQQALDQLYTQLSNLDPKDGAVVVLGYTDRIGSDAYNQRLSQ 178
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
+RA +V +Y V++GI A ++ G+ P + A +RR + +K
Sbjct: 179 QRAQSVVDYLVSKGIPAGKITAQGQGESNPVTGSTCDNVKQRAALIDCLAPDRRVEIEVK 238
Query: 155 G 155
G
Sbjct: 239 G 239
>gi|120436709|ref|YP_862395.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
gi|117578859|emb|CAL67328.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
Length = 536
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 43/111 (38%), Gaps = 6/111 (5%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYA 108
D + FD I + L ++ ++++++ I H D +I L R
Sbjct: 414 DPILFDLDKAEIESKAARQLDHIAAYMQEYPELLIDIRSHTDSRADDKYNIKLSQNRVAV 473
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHD-----EDAYAKNRRAIVFLK 154
Y V G+ +R+ YG+ + EDA+A NRR+ L
Sbjct: 474 TRQYLVNMGVDGNRISGRGYGETELVNNCRNKIPCPEDAHAINRRSEFILS 524
>gi|19881375|gb|AAM00930.1|AF491822_1 hemagglutinin antigen [Avibacterium paragallinarum]
Length = 344
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 10/120 (8%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRR 105
++ V F ++RP VL + + + + G+ D +GS +++ L RR
Sbjct: 224 ALNSDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDVAGYTDRIGSEAANLKLSQRR 283
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLKGC 156
A V NY V++G++ + T YG+ P A +RR + +KG
Sbjct: 284 ADTVANYLVSKGVAQEVISSTGYGEANPVTGAKCDTVKGRKALIACLADDRRVEISVKGE 343
>gi|116624434|ref|YP_826590.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116227596|gb|ABJ86305.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076]
Length = 508
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 43/128 (33%), Gaps = 8/128 (6%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGH 88
S + +L +V D + S+R + L+ + + + IEG
Sbjct: 371 SLNGLLPSRDTPRGLIVTVPDQ---GFNGASLRTDYSERLARVAAVVAAEQGLRMTIEGS 427
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D + + ++ V + + G+ +S + G P E + NRR
Sbjct: 428 TDSAATESLAMKRAYE----VRDAMMRGGLPSSSVDARGLGASRPLTSNGTESGRSTNRR 483
Query: 149 AIVFLKGC 156
+ + G
Sbjct: 484 VEIVISGS 491
>gi|163753666|ref|ZP_02160789.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Kordia algicida OT-1]
gi|161325880|gb|EDP97206.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Kordia algicida OT-1]
Length = 626
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADELGSRNSSIALGLR 104
V + ++FD ++IR L + + + K+ + +E H D GS + + L R
Sbjct: 511 VIVLNPIYFDFDKHNIRQDAAFELDKVVNVMTKYPNMVIKVETHTDIRGSASYNQRLSER 570
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH---DEDAYAKNRRAIVFL 153
RA + Y +++GI ASR+ G+ P + E+ + +NRR+ +
Sbjct: 571 RAKSTVQYIISKGIDASRLSSEGKGESSPLIDCGNKCTEEEHQQNRRSDFII 622
>gi|153840578|ref|ZP_01993245.1| sodium-type flagellar protein MotY [Vibrio parahaemolyticus AQ3810]
gi|149745760|gb|EDM56890.1| sodium-type flagellar protein MotY [Vibrio parahaemolyticus AQ3810]
Length = 245
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Query: 59 YSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
+ A + L+ + ++ + L+ + D ++ S +L RRA ++ YF +
Sbjct: 144 DQLTKASKKRLAQIADYVRHNQDIDLVLVATYTDSTDGKSESQSLSERRAESLRTYFESL 203
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G+ R++V YGK P KNRR ++ L
Sbjct: 204 GLPEDRIQVQGYGKRRPIADNGTPIGKDKNRRVVISL 240
>gi|58200723|gb|AAW66611.1| hemagglutinin antigen [Avibacterium paragallinarum]
Length = 344
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 10/120 (8%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRR 105
++ V F ++RP VL + + + + G+ D +GS +++ L RR
Sbjct: 224 ALNSDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDVAGYTDRIGSEAANLKLSQRR 283
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLKGC 156
A V NY V++G++ + T YG+ P A +RR + +KG
Sbjct: 284 ADTVANYLVSKGVAQEVISSTGYGEANPVTGAKCDTVKGRKALIACLADDRRVEISVKGE 343
>gi|42527497|ref|NP_972595.1| OmpA family protein [Treponema denticola ATCC 35405]
gi|41818082|gb|AAS12506.1| OmpA family protein [Treponema denticola ATCC 35405]
Length = 452
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 48/126 (38%), Gaps = 2/126 (1%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHA 89
P+ + + + + + F+ + + L + L+K + +F +EGH
Sbjct: 328 PNKDFEVTKTKRGTMLRLKN-LQFEPDRAVLLKGEEAKLDEIAKILKKSESEFFFVEGHT 386
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
++G L RA V V RGI A + G P E+ ++NRR
Sbjct: 387 ADVGKPEEEKILSQERAKTVIEKLVKRGIPAEKFIYQGAGGTKPISPNGTEEGRSQNRRV 446
Query: 150 IVFLKG 155
+ + G
Sbjct: 447 EITIIG 452
>gi|332285773|ref|YP_004417684.1| lipoprotein PlpD [Pusillimonas sp. T7-7]
gi|330429726|gb|AEC21060.1| lipoprotein PlpD [Pusillimonas sp. T7-7]
Length = 266
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 8/119 (6%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK--HDCDFLIEGHADELGSRNSSIALGLR 104
S+ V F S + A + + ++ + L++ + GH D +G ++ L +
Sbjct: 148 SLSGDVGFAFGSAVLTTAGLSTVRDVATQLKQLSKLEQVAVAGHTDRIGDAGANQRLSQQ 207
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVY------GHDEDAYAKNRRAIVFLKGCR 157
RA +V N VA+GI +S ++ YG+ P+V A NRR + ++G R
Sbjct: 208 RAESVRNALVAQGIPSSAVRAQGYGESRPAVQCDQQDRNDLIACLAPNRRVDIEVQGQR 266
>gi|329849879|ref|ZP_08264725.1| inner membrane lipoprotein yiaD [Asticcacaulis biprosthecum C19]
gi|328841790|gb|EGF91360.1| inner membrane lipoprotein yiaD [Asticcacaulis biprosthecum C19]
Length = 268
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 46/132 (34%), Gaps = 2/132 (1%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF- 83
+ + P + S+ G + + ++Y + P + + + L++ +
Sbjct: 134 EPAPAKPLNRAGQRCQDRINSAVAGGGIGYRFNAYELTPQGERTMREVHRVLKRCPAEVK 193
Query: 84 -LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
I G+ D +G+ + +L RA N A G ++ G P
Sbjct: 194 LTITGYTDNVGADEVNKSLSAGRAVDAMNALTAAGWPDDKVTAVGAGSADPVASNATAAG 253
Query: 143 YAKNRRAIVFLK 154
KNRR + L
Sbjct: 254 RKKNRRVVFTLS 265
>gi|294141706|ref|YP_003557684.1| OmpA family protein [Shewanella violacea DSS12]
gi|293328175|dbj|BAJ02906.1| OmpA family protein [Shewanella violacea DSS12]
Length = 335
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 52/134 (38%), Gaps = 3/134 (2%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKH 79
+ T+ + ++ ++V FD S +L + +
Sbjct: 190 VAKSVTQPAPVAVEQVVVVASPMVIPAMTNAVHFDFDSEVPLQTH--ILVEVARHLNQYP 247
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+++G+ D +G ++ L RRA +V Y +S +++ + + G+ P +
Sbjct: 248 SASVVLQGYTDAVGPSGYNLKLSKRRAVSVAAYLKKLEVSDAQISIEALGETHPELDNIT 307
Query: 140 EDAYAKNRRAIVFL 153
E+ A NRR + +
Sbjct: 308 EEHRANNRRVYISI 321
>gi|269965970|ref|ZP_06180062.1| sodium-type flagellar protein MotY [Vibrio alginolyticus 40B]
gi|269829366|gb|EEZ83608.1| sodium-type flagellar protein MotY [Vibrio alginolyticus 40B]
Length = 293
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Query: 59 YSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
+ A + LS + ++ + L+ + D +++S +L RRA ++ +YF +
Sbjct: 192 DQLTKASKKRLSQIADYIRHNQDIDLVLVATYTDSTDGKSASQSLSERRAESLRDYFQSL 251
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G+ R++V YGK P KNRR ++ L
Sbjct: 252 GLPEDRIQVQGYGKRRPIADNGSPIGKDKNRRVVISL 288
>gi|254236451|ref|ZP_04929774.1| hypothetical protein PACG_02437 [Pseudomonas aeruginosa C3719]
gi|126168382|gb|EAZ53893.1| hypothetical protein PACG_02437 [Pseudomonas aeruginosa C3719]
Length = 322
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 51/139 (36%), Gaps = 2/139 (1%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
+ ++ L F V F ++ L + L+
Sbjct: 143 CACCRRASPASTASTRPGIAKLLPVNFEQVKLAQVGFPDGGTALNDVARAKLDIILQLLK 202
Query: 78 KHDC--DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
++GH+D G+R ++ L RRA AV Y + G+ S++ V YG+ P V
Sbjct: 203 ADPSINRIELDGHSDNSGNRLTNRDLSRRRALAVQEYLKSNGVPESQINVRFYGERYPLV 262
Query: 136 YGHDEDAYAKNRRAIVFLK 154
+ A+NRR V L
Sbjct: 263 ANNSAANRARNRRVTVHLS 281
>gi|27376621|ref|NP_768150.1| hypothetical protein bll1510 [Bradyrhizobium japonicum USDA 110]
gi|27349762|dbj|BAC46775.1| flagellar motor protein [Bradyrhizobium japonicum USDA 110]
Length = 342
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 12/118 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIEGHAD----ELGSR 95
VFFDT ++ P L + + L + D ++GH D S
Sbjct: 222 FQSEVFFDTGQATLLPEGRAELDTVANALIELDKKIPAEIAWVLRVDGHTDVRPVSGASF 281
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA +V Y ++ G+ A R+ +G+ P + EDAY +NRR + L
Sbjct: 282 KSNWDLSAARAISVVQYLISLGVPAQRLVAAGFGEFQPLDTANTEDAYKRNRRIELKL 339
>gi|124003926|ref|ZP_01688773.1| OmpA family protein [Microscilla marina ATCC 23134]
gi|123990505|gb|EAY29985.1| OmpA family protein [Microscilla marina ATCC 23134]
Length = 489
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 57/139 (41%), Gaps = 2/139 (1%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKH 79
+ + + SP N+ + E+ + SV+F+ + L+ + + +
Sbjct: 350 VPQEEKVVPSPSVATNKKAPAEKHLELLAKSVYFEYKKNYLINPAKAYLNQVVNVLKKYP 409
Query: 80 DCDFLIEGH-ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ + I+GH D S ++ L RA V Y V GI+A R+ T +G + P+
Sbjct: 410 EIELEIQGHTCDISQSEANNQQLSEDRAQKVKAYLVKNGINAQRLTTTGFGSKQPAFPND 469
Query: 139 DEDAYAKNRRAIVFLKGCR 157
D +NRR + +
Sbjct: 470 DYYNRVRNRRVQFKVVKDK 488
>gi|19881369|gb|AAM00927.1|AF491819_1 hemagglutinin antigen [Avibacterium paragallinarum]
Length = 344
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 10/120 (8%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRR 105
++ V F ++RP VL + + + + G+ D +GS +++ L RR
Sbjct: 224 ALNSDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDVAGYTDRIGSEAANLKLSQRR 283
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLKGC 156
A V NY V++G++ + T YG+ P A +RR + +KG
Sbjct: 284 ADTVANYLVSKGVAQEVISSTGYGEANPVTGAKCDTVKGRKALIACLADDRRVEISVKGE 343
>gi|320183086|gb|EFW57948.1| Integral membrane protein YfiB [Shigella flexneri CDC 796-83]
gi|323167728|gb|EFZ53423.1| ompA family protein [Shigella sonnei 53G]
gi|332092191|gb|EGI97269.1| ompA family protein [Shigella boydii 3594-74]
gi|332765583|gb|EGJ95796.1| ompA family protein [Shigella flexneri 2930-71]
gi|333000803|gb|EGK20377.1| ompA family protein [Shigella flexneri K-218]
Length = 127
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 2/123 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF-LIEGHADE 91
+ +S + D++ F + Y + P Q + + + L ++GH D
Sbjct: 2 QSYGFTESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDN 61
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + + L L+RA V + + G + GK+ P A+NRR
Sbjct: 62 YGEDSYNEGLSLKRANVVADAWAIGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVA 121
Query: 151 VFL 153
V +
Sbjct: 122 VVI 124
>gi|315223632|ref|ZP_07865486.1| outer membrane protein A [Capnocytophaga ochracea F0287]
gi|314946413|gb|EFS98408.1| outer membrane protein A [Capnocytophaga ochracea F0287]
Length = 340
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 44/110 (40%), Gaps = 6/110 (5%)
Query: 50 DSVFFDTSSYSIRPADIQVL-SNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
D++ F+ +IR L + I+ H D G ++ L +A +
Sbjct: 228 DNIHFNYGRTNIRYDASVQLAKIVAFLEANPTVKIAIKVHTDSRGEDGYNMNLTETQAQS 287
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHD-----EDAYAKNRRAIVFL 153
++ + V++GIS +R+ YG+ + E+ + N+R +
Sbjct: 288 IYQWLVSKGISPNRLTAKGYGETQLVNGCENGVPCSEEEHQANKRVEFII 337
>gi|253568033|ref|ZP_04845444.1| outer membrane protein [Bacteroides sp. 1_1_6]
gi|298387668|ref|ZP_06997219.1| lipoprotein PG3 [Bacteroides sp. 1_1_14]
gi|251842106|gb|EES70186.1| outer membrane protein [Bacteroides sp. 1_1_6]
gi|298259524|gb|EFI02397.1| lipoprotein PG3 [Bacteroides sp. 1_1_14]
Length = 260
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 53/143 (37%), Gaps = 11/143 (7%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW--LE 77
+ + +++ + + + F T + ++ A LS + +
Sbjct: 101 AAAEAKQIEGAQVEQITDNNGLQAVKVTFDSGILFTTGNATLSAAAKSALSKFANNVLNQ 160
Query: 78 KHDCDFLIEGHADEL--------GSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSY 128
D D I G+ D SR ++ L RA +V +Y + G+S++++K V
Sbjct: 161 NRDMDVSIYGYTDNQGWRNSTAEQSRQKNLNLSQERAQSVASYLLNCGVSSNQIKGVQGM 220
Query: 129 GKEMPSVYGHDEDAYAKNRRAIV 151
G+ P +NRR V
Sbjct: 221 GESDPIASNDTAAGREQNRRVEV 243
>gi|197335579|ref|YP_002155689.1| sodium-type flagellar protein MotY [Vibrio fischeri MJ11]
gi|197317069|gb|ACH66516.1| sodium-type flagellar protein MotY [Vibrio fischeri MJ11]
Length = 292
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNSSIALGLRRAYA 108
+ FD +S + A + LS + +++ L+ + D G +N + + RRA
Sbjct: 183 ILHFDKNSDELNKASKKRLSQIADFIKYTKDVDLVLVATYTDSSGGKNVNQQVSERRALK 242
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ NYF + G+ A R++V SYG+ P KNRR ++ L
Sbjct: 243 LQNYFESIGLPADRIRVHSYGERRPIADNATPIGKNKNRRVVISL 287
>gi|172062069|ref|YP_001809721.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6]
gi|171994586|gb|ACB65505.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6]
Length = 555
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 44/111 (39%), Gaps = 3/111 (2%)
Query: 46 SSVGDSVFFDTSSYSIR--PADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGL 103
+ F + + ++ L E D LIEGHAD GS ++++ L
Sbjct: 438 VQIDSLSLFASGKATFSPAHERRELAHVLRLIRENPDQRVLIEGHADSEGSADANLRLSE 497
Query: 104 RRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA A+ ++ VA G + R + G P E A NRR V L
Sbjct: 498 ARARAIRDWLVAEGGLSVARFAIQGMGDIRPIADNRSEAGRALNRRVDVSL 548
>gi|59711533|ref|YP_204309.1| flagellar motor protein MotY [Vibrio fischeri ES114]
gi|59479634|gb|AAW85421.1| flagellar motor protein MotY [Vibrio fischeri ES114]
Length = 292
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNSSIALGLRRAYA 108
+ FD +S + A + LS + +++ L+ + D G +N + + RRA
Sbjct: 183 ILHFDKNSDELNKASKKRLSQIADFIKYTKDVDLVLVATYTDSSGGKNVNQQVSERRALK 242
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ NYF + G+ A R++V SYG+ P KNRR ++ L
Sbjct: 243 LQNYFESIGLPADRIRVHSYGERRPIADNATPIGKNKNRRVVISL 287
>gi|46581013|ref|YP_011821.1| chemotaxis MotB protein [Desulfovibrio vulgaris str. Hildenborough]
gi|120601691|ref|YP_966091.1| OmpA/MotB domain-containing protein [Desulfovibrio vulgaris DP4]
gi|46450434|gb|AAS97081.1| chemotaxis MotB protein, putative [Desulfovibrio vulgaris str.
Hildenborough]
gi|120561920|gb|ABM27664.1| OmpA/MotB domain protein [Desulfovibrio vulgaris DP4]
gi|311234697|gb|ADP87551.1| OmpA/MotB domain protein [Desulfovibrio vulgaris RCH1]
Length = 243
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 49/130 (37%), Gaps = 5/130 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
++P + S+ V + + S + P +VL ++ L++++ ++
Sbjct: 100 ADATPQSASGISADDVGVQLRVNSDIMYAPGSAELAPEGAKVLDDVIRILKEYNLYLVVR 159
Query: 87 GHADELGSRNSSIALGL-----RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
GH D RNS R A AV I +R++ +Y P D
Sbjct: 160 GHTDSGEPRNSIYPSNWELSGARAAAAVRYIITHGEIKPTRLRSIAYADTRPLEPNTSPD 219
Query: 142 AYAKNRRAIV 151
+ AKNRR
Sbjct: 220 SRAKNRRVEF 229
>gi|32266001|ref|NP_860033.1| flagellar motor protein MotB [Helicobacter hepaticus ATCC 51449]
gi|32262050|gb|AAP77099.1| flagellar motor component MotB [Helicobacter hepaticus ATCC 51449]
Length = 251
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 53/147 (36%), Gaps = 9/147 (6%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVL---S 70
+ S + + + + + + + E ++ S + ++FFD+ S I +D+ +
Sbjct: 82 AISESSSVTSAEIEQMAEEGGILEQ-MEMGMSLRLPSNLFFDSGSAEINNSDVFLYLQRM 140
Query: 71 NLGSWLEKHDCDFLIEGHADELG-----SRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
+ + G+ D + L R+ +V + GIS R+
Sbjct: 141 SAIIKKLPDYVKIDVRGYTDNAPLPVGSRYKDNYELSSARSLSVMKNLIKNGISPERISF 200
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ YG+ AKN R +F
Sbjct: 201 SGYGEHQAIAPNDSALNRAKNNRVEIF 227
>gi|114564063|ref|YP_751577.1| OmpA/MotB domain-containing protein [Shewanella frigidimarina NCIMB
400]
gi|114335356|gb|ABI72738.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400]
Length = 376
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 40/107 (37%), Gaps = 2/107 (1%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+ F S IR L L + ++GHA +G ++ L RRA AV
Sbjct: 263 ILFANDSAEIRAGSFADLEKLADHLTKYPQHTVSVQGHASNVGKAEYNMKLSERRAVAVA 322
Query: 111 NYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
+ + + R+ YG P + G +A NRR + G
Sbjct: 323 SALNKKYGISISRISSVGYGVTKPVMQGSSAEANRVNRRIEAIVTGT 369
>gi|332528097|ref|ZP_08404128.1| hypothetical protein RBXJA2T_19116 [Rubrivivax benzoatilyticus JA2]
gi|332112668|gb|EGJ12461.1| hypothetical protein RBXJA2T_19116 [Rubrivivax benzoatilyticus JA2]
Length = 215
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 46/132 (34%), Gaps = 11/132 (8%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS----NLGSWLEKHDCDFLIE 86
+ + +V F +S ++P Q+L L ++L D ++
Sbjct: 72 AVPLAAGRVTLAGGRIGISGNVLFAFNSAELQPEGRQLLKSLAGPLAAYLSARDEVLMVS 131
Query: 87 GHADELG-------SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
G D+ + L +RA V + G+ +S + ++G E P D
Sbjct: 132 GFTDDRQVRDGGRARFADNWELSAQRALTVTRALIEDGVPSSAVFAAAFGAEQPVASNAD 191
Query: 140 EDAYAKNRRAIV 151
A NRR +
Sbjct: 192 AAGRALNRRVEI 203
>gi|149918478|ref|ZP_01906968.1| putative chemotaxis MotB protein [Plesiocystis pacifica SIR-1]
gi|149820778|gb|EDM80188.1| putative chemotaxis MotB protein [Plesiocystis pacifica SIR-1]
Length = 258
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/152 (15%), Positives = 43/152 (28%), Gaps = 11/152 (7%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS 70
+ + ++ + + S V D V F T ++ ++L
Sbjct: 100 ALAAVKALQETLSKSLVEEIETGDIRVSERHGYLVVDVSDKVLFATGEATLSERGKKLLG 159
Query: 71 NLGSW--LEKHDCDFLIEGHADELG--------SRNSSIALGLRRAYAVFNYFVARGISA 120
L D F + GH D + ++ L RA V +
Sbjct: 160 RLAESLLTLPKDSVFQVGGHTDNQPIKSEEVLANFPTNWELSASRATNVVRFLEEECSVP 219
Query: 121 S-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
R+ + + P AKNRR +
Sbjct: 220 GARLVAAGFSEFRPVSSNKKAKGRAKNRRIEI 251
>gi|29423528|gb|AAO73590.1| lateral flagellar MotY-like protein [Vibrio parahaemolyticus]
Length = 340
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 3/111 (2%)
Query: 46 SSVGDSVF-FDTSSYSIRPADIQVLSNLGSW--LEKHDCDFLIEGHADELGSRNSSIALG 102
S D V F ++ Q L+ L S+ ++ LI+GH D +G R +++++
Sbjct: 203 SQARDIVLPFQFGQKTLNATQQQTLAALYSYLSVDDRVTKVLIDGHTDNVGPRLTNLSVS 262
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA V + +A G++ + ++V S+G P + AKNRR + L
Sbjct: 263 RLRAQQVADALIAHGVNPNIIEVRSHGDRYPVANNNTAAGQAKNRRVTLRL 313
>gi|126668392|ref|ZP_01739349.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Marinobacter sp. ELB17]
gi|126627101|gb|EAZ97741.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Marinobacter sp. ELB17]
Length = 189
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
+FD + I VL + + +EGHAD+ G+ ++ALG RRA AV
Sbjct: 87 YFDFDTAEISAESRDVLVAHARYLSANPSMNARLEGHADDRGTSEYNLALGERRANAVQR 146
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ + G S +++ SYG+E P+V G + A ++NRR + +
Sbjct: 147 FLIVNGASRGQLETISYGEEKPAVQGMSDSARSQNRRVELIFR 189
>gi|332754029|gb|EGJ84401.1| ompA family protein [Shigella flexneri K-671]
gi|333015875|gb|EGK35211.1| ompA family protein [Shigella flexneri K-304]
Length = 127
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 2/123 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF-LIEGHADE 91
+ +S + D++ F + Y + P Q + + + L ++GH D
Sbjct: 2 QSYGFTESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDN 61
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + + L L+RA V + + G + GK+ P A+NRR
Sbjct: 62 YGEDSYNEGLSLKRANVVADAWAIGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVA 121
Query: 151 VFL 153
V +
Sbjct: 122 VVI 124
>gi|256820532|ref|YP_003141811.1| OmpA/MotB domain-containing protein [Capnocytophaga ochracea DSM
7271]
gi|256582115|gb|ACU93250.1| OmpA/MotB domain protein [Capnocytophaga ochracea DSM 7271]
Length = 340
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 44/110 (40%), Gaps = 6/110 (5%)
Query: 50 DSVFFDTSSYSIRPADIQVL-SNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
D++ F+ +IR L + I+ H D G ++ L +A +
Sbjct: 228 DNIHFNYGRTNIRYDASVQLAKIVAFLEANPTVKIAIKVHTDSRGEDGYNMNLTETQAQS 287
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHD-----EDAYAKNRRAIVFL 153
++ + V++GIS +R+ YG+ + E+ + N+R +
Sbjct: 288 IYQWLVSKGISPNRLTAKGYGETQLVNGCENGVPCSEEEHQANKRVEFII 337
>gi|332298234|ref|YP_004440156.1| OmpA/MotB domain protein [Treponema brennaborense DSM 12168]
gi|332181337|gb|AEE17025.1| OmpA/MotB domain protein [Treponema brennaborense DSM 12168]
Length = 236
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 46/135 (34%), Gaps = 8/135 (5%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV----LSNLGSWLEKHDCD 82
+ SS + ++ FF S ++ + + L+ S E
Sbjct: 96 APDVKSNKITLSSDERGLVITLASDSFFAPGSAALNIEETRATVLRLAQFLSSKELSGRR 155
Query: 83 FLIEGHAD----ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
F IEGH D S+ L RA V +Y G++ ++ V Y P
Sbjct: 156 FRIEGHTDGTPVASKDFPSNWELSAARAVNVLHYLSDFGVNEAQFSVAGYADTRPKFSND 215
Query: 139 DEDAYAKNRRAIVFL 153
+ A NRR + +
Sbjct: 216 TAEGRAYNRRVDIII 230
>gi|28901394|ref|NP_801049.1| putative sodium-type flagellar protein MotY [Vibrio
parahaemolyticus RIMD 2210633]
gi|153835953|ref|ZP_01988620.1| putative sodium-type flagellar protein MotY [Vibrio
parahaemolyticus AQ3810]
gi|260362948|ref|ZP_05775817.1| putative sodium-type flagellar protein MotY [Vibrio
parahaemolyticus K5030]
gi|260880235|ref|ZP_05892590.1| putative sodium-type flagellar protein MotY [Vibrio
parahaemolyticus AN-5034]
gi|260895352|ref|ZP_05903848.1| putative sodium-type flagellar protein MotY [Vibrio
parahaemolyticus Peru-466]
gi|28809941|dbj|BAC62882.1| putative sodium-type flagellar protein MotY precursor [Vibrio
parahaemolyticus RIMD 2210633]
gi|149750707|gb|EDM61452.1| putative sodium-type flagellar protein MotY [Vibrio
parahaemolyticus AQ3810]
gi|308085759|gb|EFO35454.1| putative sodium-type flagellar protein MotY [Vibrio
parahaemolyticus Peru-466]
gi|308091961|gb|EFO41656.1| putative sodium-type flagellar protein MotY [Vibrio
parahaemolyticus AN-5034]
gi|308112265|gb|EFO49805.1| putative sodium-type flagellar protein MotY [Vibrio
parahaemolyticus K5030]
Length = 340
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 3/111 (2%)
Query: 46 SSVGDSVF-FDTSSYSIRPADIQVLSNLGSW--LEKHDCDFLIEGHADELGSRNSSIALG 102
S D V F ++ Q L+ L S+ ++ LI+GH D +G R +++++
Sbjct: 203 SQARDIVLPFQFGQKTLNATQQQTLAALYSYLSVDDRVTKVLIDGHTDNVGPRLTNLSVS 262
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA V + +A G++ + ++V S+G P + AKNRR + L
Sbjct: 263 RLRAQQVADALIAHGVNPNIIEVRSHGDRYPVANNNTAAGQAKNRRVTLRL 313
>gi|261417399|ref|YP_003251082.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261373855|gb|ACX76600.1| OmpA/MotB domain protein [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302327366|gb|ADL26567.1| putative chemotaxis MotB protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 216
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 41/125 (32%), Gaps = 7/125 (5%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHAD----ELGS 94
E + S F + ++ V+ + L + ++ G D +
Sbjct: 85 EDGKIQIQASFLFPINGANLTKEGEGVIRGISKGLLEALDSTDVIMVSGFTDDIPFSGST 144
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
++ L RA V V G R+ +G+ P E+ NRR + +
Sbjct: 145 SYTNWNLSTERAVNVVKMLVKMGFPPDRLFAAGFGEHRPKYPNDSEEHRRLNRRVEIGVT 204
Query: 155 GCRAN 159
++N
Sbjct: 205 PLQSN 209
>gi|170727083|ref|YP_001761109.1| OmpA/MotB domain-containing protein [Shewanella woodyi ATCC 51908]
gi|169812430|gb|ACA87014.1| OmpA/MotB domain protein [Shewanella woodyi ATCC 51908]
Length = 289
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
Query: 54 FDTSSYSIRPADIQVLSNLGSW--LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
++ + ++ + + + LI+ + D G R+ + + RA +V
Sbjct: 184 YEFGGKELTRYAKAQIAKVQEYLSYDPEVELVLIDAYTDSYGGRSINQKISEERADSVKE 243
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+F++ GI+ R+ +G+ D A+NRR ++ +
Sbjct: 244 FFISAGITQERIHTVGHGERHHVASNATIDERARNRRVVIRI 285
>gi|262393713|ref|YP_003285567.1| sodium-type flagellar protein MotY [Vibrio sp. Ex25]
gi|1550618|dbj|BAA12313.1| component of sodium-driven polar flagellar motor [Vibrio
alginolyticus]
gi|262337307|gb|ACY51102.1| sodium-type flagellar protein MotY precursor [Vibrio sp. Ex25]
Length = 293
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Query: 59 YSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
+ A + LS + ++ + L+ + D +++S +L RRA ++ +YF +
Sbjct: 192 DQLTKASKKRLSQIADYIRHNQDIDLVLVATYTDSTDGKSASQSLSERRAESLRDYFQSL 251
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G+ R++V YGK P KNRR ++ L
Sbjct: 252 GLPEDRIQVQGYGKRRPIADNGSPIGKDKNRRVVISL 288
>gi|313639080|gb|EFS04061.1| chemotaxis protein MotB [Listeria seeligeri FSL S4-171]
Length = 275
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 42/123 (34%), Gaps = 8/123 (6%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--LIEGHADELG---- 93
E ++ D + F + S + ++ +G + ++ GH D +
Sbjct: 142 SDEGLLITIRDDILFQSGSAELSAGKREIAKEIGDLFAQGKGTMEGIVSGHTDNVPISTS 201
Query: 94 SRNSSIALGLRRAYAVFNYFV--ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ +S+ L + RA + ++ YG+ P KNRR +
Sbjct: 202 TYSSNWELSVARAVNFMEAIIQENNEVNPGEFSARGYGEFKPVAKNDIATNREKNRRVEI 261
Query: 152 FLK 154
++
Sbjct: 262 MVR 264
>gi|170703211|ref|ZP_02894016.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
gi|170131877|gb|EDT00400.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
Length = 214
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 51/142 (35%), Gaps = 10/142 (7%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS----NLGSW 75
+ + + + +V F +S ++P +L L ++
Sbjct: 58 AQQRKSLEQALAGPLAAGRVTLVNGRIGISGAVLFALNSDQLQPEGRDLLKTLAGPLAAY 117
Query: 76 LEKHDCDFLIEGHADELG------SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
L+ D ++ G AD+ + L +RA V + G+ A + ++G
Sbjct: 118 LKTRDEILMVSGFADDQQVRAGNRKFADNWELSAKRALTVTRALIDAGVPARSVFAAAFG 177
Query: 130 KEMPSVYGHDEDAYAKNRRAIV 151
E P D++ AKNRR +
Sbjct: 178 SEQPVSSNADDEGRAKNRRVEI 199
>gi|149773177|dbj|BAF64763.1| outer membrane protein A [Shewanella livingstonensis]
Length = 385
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 40/107 (37%), Gaps = 2/107 (1%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+ F S IR L L + ++GHA +G ++ L RRA AV
Sbjct: 272 ILFANDSAEIRAGSFADLEKLADHLTKYPQHTVSVQGHASNVGKAEYNMKLSERRAVAVA 331
Query: 111 NYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
+ + + R+ YG P + G +A NRR + G
Sbjct: 332 SALNKKYGISISRISSVGYGVTKPVMQGSSAEANRVNRRIEAIVTGT 378
>gi|295395658|ref|ZP_06805850.1| OmpA family protein [Brevibacterium mcbrellneri ATCC 49030]
gi|294971474|gb|EFG47357.1| OmpA family protein [Brevibacterium mcbrellneri ATCC 49030]
Length = 607
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 52/133 (39%), Gaps = 9/133 (6%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLI 85
++ + S + + +V V FD S ++ +D +++ + + L+K I
Sbjct: 270 VTESVMDTSVSDRGDSSALNVSADVLFDFDSDKVKDSDSKLIDGIANELKKSAAGQKVTI 329
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDA-- 142
EGH D+ G ++ L RRA +V + + + +G+ P +
Sbjct: 330 EGHTDDEGDEKYNVDLSNRRAESVKKVLEPKVKGSGISFETKGFGESQPILPNRTAGGDA 389
Query: 143 ----YAKNRRAIV 151
AKNRR
Sbjct: 390 IKKNQAKNRRVSF 402
>gi|284040562|ref|YP_003390492.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
gi|283819855|gb|ADB41693.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
Length = 294
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 42/114 (36%), Gaps = 6/114 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHAD----ELGSRNSSIA 100
S+ D + F + SY I P VL + + H D D L+EGH D + +
Sbjct: 161 VSISDKLLFKSGSYDITPKAETVLGKVAKVVNDHKDLDILVEGHTDAVPISTPAIKDNWD 220
Query: 101 LGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V A+ R+ + P +NRR + +
Sbjct: 221 LSALRATSVVRTLQAKFGVAPERLTAGGRSEFAPKDDNTTAVGRQQNRRTEIII 274
>gi|190895030|ref|YP_001985323.1| putative outer membrane lipoprotein [Rhizobium etli CIAT 652]
gi|190700691|gb|ACE94773.1| probable outer membrane lipoprotein [Rhizobium etli CIAT 652]
gi|327194360|gb|EGE61220.1| putative outer membrane lipoprotein [Rhizobium etli CNPAF512]
Length = 178
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 56/150 (37%), Gaps = 8/150 (5%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESS-------LQEQFSSSVGDSVFFDTSSYSIRPAD 65
+ I+ ++ + T +E F +VG ++F S ++
Sbjct: 23 CSTTEIAALEEPTAAPMTGQTNDPAPGFENVAAGSEEDFILNVGRRIYFKQDSATLDSVA 82
Query: 66 IQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+ L N +W ++G AD+ GS + L +RA A Y ++G+ RM
Sbjct: 83 MATLDNQAAWLNRNPTWLLKLQGFADDSGSPSKMQTLSQKRADAAMAYLASKGVDPKRMW 142
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
YG + D +NRR + L+
Sbjct: 143 AKGYGNDREVRDCTDRSCKVQNRRVVTNLR 172
>gi|328948405|ref|YP_004365742.1| OmpA/MotB domain protein [Treponema succinifaciens DSM 2489]
gi|328448729|gb|AEB14445.1| OmpA/MotB domain protein [Treponema succinifaciens DSM 2489]
Length = 240
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 42/125 (33%), Gaps = 9/125 (7%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIR-PADIQVLSNLGSWLEKHDC---DFLIEGHADELG 93
+S + S+ FF+ S + L NL + + + IEGH D
Sbjct: 110 TSDERGLVISLASDTFFEEGSAELNIEEARGTLINLAKFFASPEVAGRRWRIEGHTDNRP 169
Query: 94 -----SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
S+ RA V +Y G+ + + Y P + + A NRR
Sbjct: 170 VPASSIYPSNWEFSAARAANVLHYLADFGVDEQQFSIAGYADTRPKLSNDTAEGRAYNRR 229
Query: 149 AIVFL 153
V +
Sbjct: 230 VDVIV 234
>gi|283851028|ref|ZP_06368313.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B]
gi|283573674|gb|EFC21649.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B]
Length = 263
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 47/131 (35%), Gaps = 4/131 (3%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI 85
+ S S+ V +SV F T S + PA +VL + L+ + +
Sbjct: 117 SSDLSVKNNSGVSNDSSGVLMQVNNSVMFRTGSAELTPAAAKVLDGVARILQDFKINLTV 176
Query: 86 EGHADELG---SRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDED 141
GHAD+ S L RA A Y + + R++ P V +
Sbjct: 177 RGHADDEEKGGPYPSKWELSAARAAAATRYLAEKTGIPTTRLRAVGLADSQPLVPPTSAE 236
Query: 142 AYAKNRRAIVF 152
A+NRR F
Sbjct: 237 NKARNRRIEFF 247
>gi|163755600|ref|ZP_02162719.1| elongation factor P [Kordia algicida OT-1]
gi|161324513|gb|EDP95843.1| elongation factor P [Kordia algicida OT-1]
Length = 281
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 49/124 (39%), Gaps = 4/124 (3%)
Query: 34 VLNESSLQEQFSSSVGDSVFFD-TSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHA 89
E + V + S + +P + + + I GH
Sbjct: 156 QTMSEERIEAIDKGIASKVLYAGFGSKTFKPDNTLNAYAIELKNYLAKHPTKHVEIIGHT 215
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G ++ G +RA +V NYFV++GI+A ++ ++S G+ P ++ NRR
Sbjct: 216 DSNGEAEANKWFGQQRAKSVMNYFVSQGIAAEKLTISSKGETDPIAPNTTKEGQRLNRRI 275
Query: 150 IVFL 153
+ +
Sbjct: 276 EINV 279
>gi|320194769|gb|EFW69398.1| Integral membrane protein YfiB [Escherichia coli WV_060327]
Length = 127
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 2/123 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF-LIEGHADE 91
+ +S + D++ F + Y + P Q + + + L ++GH D
Sbjct: 2 QSYGFTESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDN 61
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + + L L+RA V + + G + GK+ P A+NRR
Sbjct: 62 YGEDSYNEVLSLKRANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVA 121
Query: 151 VFL 153
V +
Sbjct: 122 VVI 124
>gi|153002489|ref|YP_001368170.1| OmpA/MotB domain-containing protein [Shewanella baltica OS185]
gi|217975056|ref|YP_002359807.1| OmpA/MotB domain-containing protein [Shewanella baltica OS223]
gi|151367107|gb|ABS10107.1| OmpA/MotB domain protein [Shewanella baltica OS185]
gi|217500191|gb|ACK48384.1| OmpA/MotB domain protein [Shewanella baltica OS223]
Length = 202
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/188 (19%), Positives = 58/188 (30%), Gaps = 28/188 (14%)
Query: 1 MQYSTIFI---ILSAITMM------SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDS 51
M+ F+ IL+ +M ++ D D V+ + G
Sbjct: 1 MKTIIFFLSVTILAGCSMRDTVNIDEMTTTQAYDLSDKDGDGVIEARERCNDTAQGAGTD 60
Query: 52 -----------------VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELG 93
+ F S I P + + + + IEGH G
Sbjct: 61 NYGCGKIKAINERKELSILFPNDSAYIAPEYYPQIEEVAVFLQQYPTTKVTIEGHTSRTG 120
Query: 94 SRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ ++ L RA AV R I +R+ YG P V +A +NRR +
Sbjct: 121 TDERNLVLSQERADAVTAVLAERFGIDRNRLTAKGYGSSNPVVLERTPEAEIRNRRVVAE 180
Query: 153 LKGCRANT 160
+ G T
Sbjct: 181 VTGDDTAT 188
>gi|89073344|ref|ZP_01159868.1| Putative sodium-type flagellar protein MotY [Photobacterium sp.
SKA34]
gi|89050831|gb|EAR56305.1| Putative sodium-type flagellar protein MotY [Photobacterium sp.
SKA34]
Length = 285
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 2/113 (1%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIA 100
F + + +S ++ Q L+ + ++ D L+ D + S
Sbjct: 167 GFEDIAFSVLHYSENSDTLNKISQQRLAQIADFVRYSDDIDLVLVAAFNDSISGTTESQE 226
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ RRA + YF + G+ R++V +YGK P NRR ++ L
Sbjct: 227 MSERRAEKLRQYFQSLGLPDERVQVEAYGKRRPIADNSTPMGRNLNRRVVISL 279
>gi|115360144|ref|YP_777282.1| hypothetical protein Bamb_5401 [Burkholderia ambifaria AMMD]
gi|115285432|gb|ABI90948.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
Length = 214
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 48/142 (33%), Gaps = 10/142 (7%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ + + + +V F +S ++P +L L L +
Sbjct: 58 AQQRKSLEQALAGPLAAGRVTLVNGRIGISGAVLFALNSDQLQPDGRDLLKTLAGPLAAY 117
Query: 80 DCD----FLIEGHADELG------SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
+I G AD+ + L +RA V + G+ A + ++G
Sbjct: 118 LTTRDEILMISGFADDQQVRAGNRQFADNWELSAKRALTVTRALIDAGVPARSVFAAAFG 177
Query: 130 KEMPSVYGHDEDAYAKNRRAIV 151
E P D++ AKNRR +
Sbjct: 178 SEQPVSSNADDEGRAKNRRVEI 199
>gi|72161966|ref|YP_289623.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Thermobifida fusca YX]
gi|71915698|gb|AAZ55600.1| similar to Outer membrane protein and related
peptidoglycan-associated (lipo)proteins [Thermobifida
fusca YX]
Length = 521
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 41/113 (36%), Gaps = 7/113 (6%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLG----SWLEKHDCDFLIEGHADELGSRNSSIAL 101
S+ V F+ + P V+ ++ + +I GH D +G+ + L
Sbjct: 239 ISLHSDVMFEFDRADLTPEAEAVVRRAAETLERNVDPDHPEIIIIGHTDGIGTDAYNDDL 298
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG---HDEDAYAKNRRAIV 151
+RRA V N V + V G P DE A A+NRR
Sbjct: 299 SVRRAETVRNLLVEEMGTGYTYVVEGRGSREPIAREGGPDDEQARARNRRVEF 351
>gi|301062462|ref|ZP_07203113.1| putative peptidoglycan-associated lipoprotein [delta
proteobacterium NaphS2]
gi|300443436|gb|EFK07550.1| putative peptidoglycan-associated lipoprotein [delta
proteobacterium NaphS2]
Length = 103
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/96 (33%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FD +++P ++L + +L + LI G+ D+ G+ ++ALG RRA + +
Sbjct: 1 FDFDRSNLKPEAQEILRDKADFLRANRSYSVLIAGNCDDRGTEEYNLALGERRAMSAKKF 60
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
VA GIS R+K SYG+ P+ ++ A+A NRR
Sbjct: 61 LVALGISPDRIKTISYGELRPADPANNPVAWALNRR 96
>gi|89889916|ref|ZP_01201427.1| hypothetical protein BBFL7_01736 [Flavobacteria bacterium BBFL7]
gi|89518189|gb|EAS20845.1| hypothetical protein BBFL7_01736 [Flavobacteria bacterium BBFL7]
Length = 318
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 40/84 (47%)
Query: 71 NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
+ + + GH D GSR+++ + RA +Y V GIS+SR++ + G
Sbjct: 235 MVHYLDARPQASLISVGHTDNTGSRSTNTTISANRAEFAKSYLVENGISSSRIESSGKGP 294
Query: 131 EMPSVYGHDEDAYAKNRRAIVFLK 154
+ P E+ +NRR +V LK
Sbjct: 295 DEPIATNDTEEGKEQNRRVVVTLK 318
>gi|78063303|ref|YP_373211.1| hypothetical protein Bcep18194_B2456 [Burkholderia sp. 383]
gi|77971188|gb|ABB12567.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
Length = 214
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 53/142 (37%), Gaps = 10/142 (7%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS----W 75
+ + + + +V F +S ++PA +L L + +
Sbjct: 58 AQQRKSLEQALAGPLAAGRVTLVNGRIGISGNVLFALNSDQLQPAGRDLLKTLAAPLGAY 117
Query: 76 LEKHDCDFLIEGHADELGSR------NSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
L+ D +I G AD+ + L +RA V + G+ AS + ++G
Sbjct: 118 LKTRDEILMISGFADDQQVHAGNRQFTDNWELSAKRALTVTRALIDAGVPASSVFAAAFG 177
Query: 130 KEMPSVYGHDEDAYAKNRRAIV 151
E P D++ AKNRR +
Sbjct: 178 SEQPVSSNADDEGRAKNRRVEI 199
>gi|120554886|ref|YP_959237.1| flagellar motor protein MotD [Marinobacter aquaeolei VT8]
gi|120324735|gb|ABM19050.1| OmpA/MotB domain protein [Marinobacter aquaeolei VT8]
Length = 260
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 41/117 (35%), Gaps = 4/117 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
V++ + E ++ +S+ F + +V+ + S L D +EG D
Sbjct: 124 QGVVSLETSSEWIELNLPNSMLFGSGDAEPHYDSFEVIEKIASVLRNRDNAVKVEGFTDN 183
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
S+ L RA AV + GI R+ YG+ P E+
Sbjct: 184 QPIRTSRFPSNWELSTARAAAVARMLMMEGIEPERLAAVGYGQYQPVARNDTEEGRR 240
>gi|332702326|ref|ZP_08422414.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay]
gi|332552475|gb|EGJ49519.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay]
Length = 243
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 52/117 (44%), Gaps = 1/117 (0%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNS-SI 99
E + + D + F ++ + + +L + L + GH+D +G R+ +
Sbjct: 120 DEGVALVLSDKLLFAMGEAKLKDSALPILERIAYVLAFMTAPVNVAGHSDMVGGRSDGNY 179
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
A+ RA V + G+ R+ V+++G + P + G+ + KNRR + +K
Sbjct: 180 AISANRAMEVLQFLQEYGLDNRRLSVSAFGPDQPLLEGNGPAVWNKNRRVEILVKTT 236
>gi|145633105|ref|ZP_01788837.1| Outer membrane protein P5 [Haemophilus influenzae 3655]
gi|144986331|gb|EDJ92910.1| Outer membrane protein P5 [Haemophilus influenzae 3655]
Length = 359
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 54/138 (39%), Gaps = 10/138 (7%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG-SWLEKHDCDFLIEGH 88
+ + + + S+ V F +++P L ++ + + G+
Sbjct: 222 QGEAPVVAAPEMVSKTFSLNSDVTFAFGKANLKPQAQATLDSVYGEISQVKSAKVAVAGY 281
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY--- 143
D +GS ++ L RA +V NYFVA+G++A + T YG+ P
Sbjct: 282 TDRIGSDAFNVKLSQERADSVANYFVAKGVAADAISATGYGEANPVTGATCDQVKGRKAL 341
Query: 144 ----AKNRRAIVFLKGCR 157
A +RR + + G +
Sbjct: 342 IACLAPDRRVEIAVNGTK 359
>gi|221134413|ref|ZP_03560718.1| peptidoglycan-associated lipoprotein [Glaciecola sp. HTCC2999]
Length = 188
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 46/123 (37%), Positives = 70/123 (56%), Gaps = 1/123 (0%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADE 91
E + QE+ +V+FD +I+ VL ++ ++ D +IEGH D
Sbjct: 66 QQAQEIAEQERDELMSMQTVYFDFDRATIKADFYNVLDKHAAFLVKNMDQTIVIEGHTDS 125
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
G+ +IALG RRA AV YF+ G+SAS++ V S+G+E P+V G E A+A++RRA+V
Sbjct: 126 RGTPEYNIALGERRAQAVETYFLNAGVSASQISVVSFGEEKPAVTGTSEYAFAQSRRAVV 185
Query: 152 FLK 154
K
Sbjct: 186 VYK 188
>gi|320177022|gb|EFW52043.1| Integral membrane protein YfiB [Shigella dysenteriae CDC 74-1112]
Length = 127
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 2/123 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF-LIEGHADE 91
+ +S + D++ F + Y + P Q + + + L ++GH D
Sbjct: 2 QSYGFTESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGITHARMDGHTDN 61
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + + L L+RA V + + G + GK+ P A+NRR
Sbjct: 62 YGEDSYNEGLSLKRANVVADAWAIGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVA 121
Query: 151 VFL 153
V +
Sbjct: 122 VVI 124
>gi|162451840|ref|YP_001614207.1| outer membrane protein [Sorangium cellulosum 'So ce 56']
gi|161162422|emb|CAN93727.1| outer membrane protein [Sorangium cellulosum 'So ce 56']
Length = 628
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 2/111 (1%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD--CDFLIEGHADELGSRNSSIALG 102
S V V+ T + ++ P +VL + ++++ ++GH D+ G+ ++ L
Sbjct: 511 SKPVQFVVYGKTRAETVDPISDEVLYEVRDTIQQNPDIELVEVQGHTDDNGTEEYNLRLS 570
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+RA AV ++ VA G+ ++ YG E P + KNRR +
Sbjct: 571 QQRADAVLSWLVAAGVPREKLVAKGYGFEQPVGDNRVKTGRQKNRRVQFVI 621
>gi|99080684|ref|YP_612838.1| OmpA/MotB [Ruegeria sp. TM1040]
gi|99036964|gb|ABF63576.1| OmpA/MotB [Ruegeria sp. TM1040]
Length = 1619
Score = 65.2 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 4/118 (3%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGS 94
+++F S+ +V F T IR A + VL L+ + FLIEGH D GS
Sbjct: 451 KDWEQRFGDSLRVTVEFATGKADIREAGLGVLREAADALKARGAENYVFLIEGHTDSTGS 510
Query: 95 RNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
++ L RA +V YFV R++ YG +P E NRR +
Sbjct: 511 DKINLPLSDARAKSVERYFVENAGIAPERLQTVGYGPRIPLATNATEGGKQINRRVEI 568
>gi|149920362|ref|ZP_01908832.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
gi|149818804|gb|EDM78246.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
Length = 225
Score = 64.8 bits (156), Expect = 3e-09, Method: Composition-based stats.
Identities = 22/140 (15%), Positives = 52/140 (37%), Gaps = 5/140 (3%)
Query: 18 ISGIDNLDTKISSPDTVLN-ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW- 75
I+ D + ++ F + ++ + +L ++ +
Sbjct: 67 CPAEPECVNGIADADGCPDRVPEEVAALEGTIEGLEFEHRTKATLARDSLPLLESVAAVL 126
Query: 76 LEKHDCDFLIEGHAD---ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
+ + + I+ H D R S R+A AV ++ + +G++A R++ YG++
Sbjct: 127 VAYPELELEIQAHEDTVTADQHRYMSARPTQRQAEAVADFLIQKGVAAERIQARGYGEDR 186
Query: 133 PSVYGHDEDAYAKNRRAIVF 152
P ++ NRR +
Sbjct: 187 PIDTNETKEGRRHNRRVDLV 206
>gi|108757340|ref|YP_635150.1| putative chemotaxis MotB protein [Myxococcus xanthus DK 1622]
gi|108461220|gb|ABF86405.1| putative chemotaxis MotB protein [Myxococcus xanthus DK 1622]
Length = 295
Score = 64.8 bits (156), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/120 (25%), Positives = 45/120 (37%), Gaps = 9/120 (7%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADE-------LGSR 95
+ D V FD+ SI +VL+ LGS + D + GH D+ +
Sbjct: 142 IQVDLVDKVLFDSGDASISARGQEVLTRLGSVLAKVEDKSIQVSGHTDDSPPSQKLQSTF 201
Query: 96 NSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
S+ L + RA V + G R+ YG+ P A+NRR V L
Sbjct: 202 PSNWELSVARAVNVVRFLQDTGGVPARRLVAAGYGQMRPVSTNATPLGRARNRRIEVLLM 261
>gi|95930659|ref|ZP_01313393.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684]
gi|95133311|gb|EAT14976.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684]
Length = 303
Score = 64.8 bits (156), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 52/123 (42%), Gaps = 9/123 (7%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADE------- 91
L+++ + ++ + + F + S + PA I+V+ +G L++ D +EGH D
Sbjct: 175 LKDKLTVNLVEKILFPSGSADLTPAGIKVIRQVGDILKEVDDKDIRVEGHTDNLGISKAL 234
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
S+ L RA V ++++ +YG P + A+NRR
Sbjct: 235 QAKFPSNWELSAARAANVVRVLQREVGIPGEKLEIGAYGPFHPVSSNDTPEGRAQNRRIQ 294
Query: 151 VFL 153
+ L
Sbjct: 295 IVL 297
>gi|269962741|ref|ZP_06177084.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269832543|gb|EEZ86659.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 282
Score = 64.8 bits (156), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 51/141 (36%), Gaps = 1/141 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
+ + ++ ++ + F S I P + L+ L H
Sbjct: 134 SQTTCKPPQDIEALRSDLNIVADIYDLLNVDNQFAVDSAEINPKYMGHLAEAAYILRDHP 193
Query: 81 -CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
++ GHAD G+ + L RA V Y GI++ R++ S G+ +P G
Sbjct: 194 SLSLVVTGHADATGTPEYNQKLAQDRAEQVKRYLNVFGITSDRVQTKSVGETLPLYEGQT 253
Query: 140 EDAYAKNRRAIVFLKGCRANT 160
NRR + + ++T
Sbjct: 254 PAVRLTNRRVSIEVLNANSDT 274
>gi|262066235|ref|ZP_06025847.1| fibronectin-binding protein [Fusobacterium periodonticum ATCC
33693]
gi|291380091|gb|EFE87609.1| fibronectin-binding protein [Fusobacterium periodonticum ATCC
33693]
Length = 82
Score = 64.8 bits (156), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSV 135
E+++ + +EGH D +GS +I L RRA AV + G++ R+ + + G+E P
Sbjct: 2 EQNNYEVTLEGHTDSIGSNQYNIGLSRRRAEAVKAKLIEFGLAEERIVGIEAKGEEYPVA 61
Query: 136 YGHDEDAYAKNRRAIVFL 153
+ +NRR L
Sbjct: 62 TNETPEGRLQNRRVEFRL 79
>gi|171912007|ref|ZP_02927477.1| OmpA/MotB domain protein [Verrucomicrobium spinosum DSM 4136]
Length = 1122
Score = 64.8 bits (156), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
F++EGHAD +G+ S++ L RRA V + + G+ S++ + +G+ +P
Sbjct: 1045 QYRFVLEGHADSIGTEASNMRLSERRARTVATFIESMGVDRSKLSIKWFGESLPVDDNSV 1104
Query: 140 EDAYAKNRRAIVFL 153
E KNRR + L
Sbjct: 1105 EAGRYKNRRVEIRL 1118
>gi|229844879|ref|ZP_04465017.1| outer membrane protein P5 [Haemophilus influenzae 6P18H1]
gi|229812260|gb|EEP47951.1| outer membrane protein P5 [Haemophilus influenzae 6P18H1]
Length = 355
Score = 64.8 bits (156), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 55/138 (39%), Gaps = 10/138 (7%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG-SWLEKHDCDFLIEGH 88
+ + + + S+ V F +++P L+++ + + G+
Sbjct: 218 QGEAPVVAAPEMVSKTFSLNSDVTFAFGKANLKPQAQATLNSVYGEISQVKSAKVAVAGY 277
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY--- 143
D +GS ++ L RA +V NYFVA+G++A + T YG+ P
Sbjct: 278 TDRIGSDAFNVKLSQERADSVANYFVAKGVAADAISATGYGEANPVTGATCDQVKGRKAL 337
Query: 144 ----AKNRRAIVFLKGCR 157
A +RR + + G +
Sbjct: 338 IACLAPDRRVEIAVNGTK 355
>gi|254457162|ref|ZP_05070590.1| outer membrane protein, putative [Campylobacterales bacterium GD 1]
gi|207085954|gb|EDZ63238.1| outer membrane protein, putative [Campylobacterales bacterium GD 1]
Length = 195
Score = 64.8 bits (156), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 55/140 (39%), Gaps = 1/140 (0%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
+ IS +D + ++ L E + ++F S + I + +
Sbjct: 56 VEISNLDKKEILSKESVQNEYKTLLDEMPKEAKNYRLYFKFDSSDMTSESIATIEKIIKD 115
Query: 76 LEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
+E ++ + G+ D G + L ++RA V G+++ + + YG+ P
Sbjct: 116 IEANNILQIDVIGYTDRAGKAAYNKVLSMKRAKNVIKVLTDNGVNSKIISLDYYGEANPI 175
Query: 135 VYGHDEDAYAKNRRAIVFLK 154
+ D A +NRR + LK
Sbjct: 176 IETDDGVAKKRNRRVEITLK 195
>gi|260581134|ref|ZP_05848955.1| outer membrane protein P5 [Haemophilus influenzae RdAW]
gi|260092263|gb|EEW76205.1| outer membrane protein P5 [Haemophilus influenzae RdAW]
Length = 353
Score = 64.8 bits (156), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 53/138 (38%), Gaps = 10/138 (7%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG-SWLEKHDCDFLIEGH 88
+ + + S+ V F +++P L ++ + + G+
Sbjct: 216 QGAAPVVAAPEVVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGEMSQVKSAKVAVAGY 275
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY--- 143
D +GS ++ L RA +V NYFVA+G++A + T YGK P
Sbjct: 276 TDRIGSDAFNVKLSQERADSVANYFVAKGVAADAISATGYGKANPVTGATCDQVKGRKAL 335
Query: 144 ----AKNRRAIVFLKGCR 157
A +RR + + G +
Sbjct: 336 IACLAPDRRVEIAVNGTK 353
>gi|241206240|ref|YP_002977336.1| hypothetical protein Rleg_3551 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240860130|gb|ACS57797.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 343
Score = 64.8 bits (156), Expect = 3e-09, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 39/102 (38%), Gaps = 5/102 (4%)
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG-----SRNSSIALGLRRAYAVFN 111
+ +L + + ++GH D + + L RA +V
Sbjct: 239 GQTEMAKLASALLDLAKEIPPEINWVLRVDGHTDNVPLGGTGRYRDNWELSSARAISVVK 298
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +A+G+ A R+ +G+ P G DA + NRR + L
Sbjct: 299 FLIAQGVPADRLVAAGFGEFQPIAPGDTPDARSTNRRIELKL 340
>gi|309244377|gb|ADO52193.1| OprL [Pseudomonas cichorii]
Length = 156
Score = 64.8 bits (156), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 65/123 (52%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+T + SL E+ + + +F+ S ++P ++ L L+ +
Sbjct: 34 AVDPNAGYGANTGAVDGSLSEEAALRAITTFYFEYDSSDLKPEALRSLDVHAKDLKANGA 93
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
++EG+ DE G+R +IALG RRA AV Y V +G+S +++++ SYG+E P G+D
Sbjct: 94 RVVLEGNTDERGTREYNIALGERRAKAVQRYLVLQGVSPAQLELVSYGEERPVATGNDXQ 153
Query: 142 AYA 144
++A
Sbjct: 154 SWA 156
>gi|293396726|ref|ZP_06641002.1| outer membrane protein A [Serratia odorifera DSM 4582]
gi|291420990|gb|EFE94243.1| outer membrane protein A [Serratia odorifera DSM 4582]
Length = 364
Score = 64.8 bits (156), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 52/124 (41%), Gaps = 13/124 (10%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ S++P Q L L + ++ D ++ G+ D +G ++ L
Sbjct: 233 TLKSDVLFNFGKSSLKPEGQQALDQLYTQLSSMDPKDGSVVVLGYTDPVGKDAANQKLSE 292
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS----------VYGHDEDAYAKNRRAIVFL 153
RA +V +Y V++GI A ++ G+ + A NRR + +
Sbjct: 293 ARARSVVDYLVSKGIPADKISARGMGEADQVTDSCGYKNGRATKAQIECLAPNRRVEIEV 352
Query: 154 KGCR 157
KG +
Sbjct: 353 KGIK 356
>gi|254507025|ref|ZP_05119163.1| outer membrane protein [Vibrio parahaemolyticus 16]
gi|219550020|gb|EED27007.1| outer membrane protein [Vibrio parahaemolyticus 16]
Length = 204
Score = 64.8 bits (156), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 63/139 (45%), Gaps = 4/139 (2%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDS---VFFDTSSYSIRPADIQVLSNLGSW-L 76
++ D ++P+ L ++ + + + + F SY I P + + +
Sbjct: 49 VNARDLCPNTPEGALVDNDGCGESLKNEEERQLRILFANDSYEINPIFSDQIKTMAEFLQ 108
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ I+G A ++GS ++AL +RA+AV + ++ + SR+ + YG+
Sbjct: 109 KYQSASIQIQGFASKVGSPEYNLALSRKRAHAVQDELISFDVDPSRVSIVGYGETRLEAE 168
Query: 137 GHDEDAYAKNRRAIVFLKG 155
G DE ++A NR+ + G
Sbjct: 169 GDDETSHALNRKVTATVVG 187
>gi|218887300|ref|YP_002436621.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218758254|gb|ACL09153.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 307
Score = 64.8 bits (156), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 44/121 (36%), Gaps = 14/121 (11%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD--------------EL 92
S+ D V F T + + +L+ + L + L+ GHA +
Sbjct: 119 SINDEVLFRTGATELTERGAALLARIAPVLRGVEHPVLVAGHASPARDEEGILFRLRGDE 178
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ + L L RA AV+ G+ RM + ++G P + NRR +
Sbjct: 179 KTLPTPWRLSLGRATAVYRRLADLGVPRGRMLIEAHGDTRPRFDNLTPEGRRANRRVDIV 238
Query: 153 L 153
L
Sbjct: 239 L 239
>gi|163786724|ref|ZP_02181172.1| hypothetical protein FBALC1_16102 [Flavobacteriales bacterium
ALC-1]
gi|159878584|gb|EDP72640.1| hypothetical protein FBALC1_16102 [Flavobacteriales bacterium
ALC-1]
Length = 308
Score = 64.8 bits (156), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 56/130 (43%), Gaps = 4/130 (3%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTS----SYSIRPADIQVLSNLGSWLEKHDCDF 83
I + + + +L+ + + + + ++ Q ++++ ++K
Sbjct: 178 IVTFEEGATDEALEAACEAIRKNPLVLHFNTGQAQINLTAEQRQKIADISRCVDKLGVKV 237
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
+ GH D G ++++ LG RA Y V GI + ++ TS G+ P ++
Sbjct: 238 QVVGHTDNTGDADTNMTLGQDRADFAKGYLVRNGILSDNVEATSKGQTEPIADNATDEGK 297
Query: 144 AKNRRAIVFL 153
AKNRR ++ +
Sbjct: 298 AKNRRTVITI 307
>gi|315281340|ref|ZP_07869986.1| chemotaxis protein MotB [Listeria marthii FSL S4-120]
gi|313615016|gb|EFR88514.1| chemotaxis protein MotB [Listeria marthii FSL S4-120]
Length = 275
Score = 64.8 bits (156), Expect = 3e-09, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 45/137 (32%), Gaps = 8/137 (5%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--LIEGHA 89
T + E ++ D + F + S + ++ +G + ++ GH
Sbjct: 134 GTKMTTKYSDEGLLITIRDDILFQSGSAELSAGKREIAKEIGELFAQGKGTMEGIVSGHT 193
Query: 90 DELGS----RNSSIALGLRRAYAVFNYFV--ARGISASRMKVTSYGKEMPSVYGHDEDAY 143
D + +S+ L + RA + ++ YG+ P
Sbjct: 194 DNVPISTSIYSSNWELSVARAVNFMEAIIQENSEVNPGEFSARGYGEFRPVAKNDIAVNR 253
Query: 144 AKNRRAIVFLKGCRANT 160
KNRR + ++ +T
Sbjct: 254 EKNRRVEIMVRPINRDT 270
>gi|255020103|ref|ZP_05292174.1| outer membrane protein [Acidithiobacillus caldus ATCC 51756]
gi|254970465|gb|EET27956.1| outer membrane protein [Acidithiobacillus caldus ATCC 51756]
Length = 183
Score = 64.8 bits (156), Expect = 3e-09, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+ F +S + DI+VL + + + D + G+A ++G+ ++ L +RA +V
Sbjct: 71 INFKFNSSKLLDRDIKVLDEVAEFAQKHPDAVINVNGYASKVGTYAYNLKLSQQRAESVA 130
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
Y G+ RM + + E P +N+R +
Sbjct: 131 RYLEQHGVPRDRMVLKGHSYEDPIASNATPQGRFENQRVEI 171
>gi|239996641|ref|ZP_04717165.1| flagellar motor protein MotB [Alteromonas macleodii ATCC 27126]
Length = 309
Score = 64.8 bits (156), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 48/128 (37%), Gaps = 6/128 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
D + SL +Q + + ++ F S ++P VL +G+ L + I GH+D
Sbjct: 166 DGSVEMESLGQQLTIRIRENGSFSAGSAFLQPQFQPVLRKIGTLLADVPGEIEISGHSDG 225
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHD-EDAYAK 145
S+ L +RA AV SRM V P V A+
Sbjct: 226 QHIANELYRSNWDLSAQRAVAVAEAMRTAPGFDESRMSVVGKADTDPIVENATSPSDRAQ 285
Query: 146 NRRAIVFL 153
NRR + +
Sbjct: 286 NRRVEINI 293
>gi|254492051|ref|ZP_05105228.1| OmpA family protein [Methylophaga thiooxidans DMS010]
gi|224462748|gb|EEF79020.1| OmpA family protein [Methylophaga thiooxydans DMS010]
Length = 297
Score = 64.8 bits (156), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 44/127 (34%), Gaps = 5/127 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD- 90
+ ++ S + + + F + + I +L + + L K D + GH D
Sbjct: 139 EGLIVVESQYSRIVIRIREKGSFMSGDARLNNDFIPILKKIHNVLLKTDGRIAVAGHTDD 198
Query: 91 ---ELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKN 146
S+ L RA +V + +A G R + Y P A+N
Sbjct: 199 VPINTSRYRSNWELSTSRATSVVHELLAPGDMPAERFVLEGYADTKPLEPNDSPTNRARN 258
Query: 147 RRAIVFL 153
RR + +
Sbjct: 259 RRVEIIV 265
>gi|312965520|ref|ZP_07779752.1| ompA family protein [Escherichia coli 2362-75]
gi|312289940|gb|EFR17828.1| ompA family protein [Escherichia coli 2362-75]
Length = 127
Score = 64.8 bits (156), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 2/123 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF-LIEGHADE 91
+ +S + D++ F + Y + P Q + + + L ++GH D
Sbjct: 2 QSYGFTESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASIGLTHARMDGHTDN 61
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + + L L+RA V + + G + GK+ P A+NRR
Sbjct: 62 YGEDSYNEVLSLKRANVVADAWAIGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVA 121
Query: 151 VFL 153
V +
Sbjct: 122 VVI 124
>gi|16273088|ref|NP_439322.1| outer membrane protein P5 [Haemophilus influenzae Rd KW20]
gi|1171899|sp|P43840|OMP51_HAEIN RecName: Full=Outer membrane protein P5; Short=OMP P5; Flags:
Precursor
gi|1574091|gb|AAC22819.1| outer membrane protein P5 (ompA) [Haemophilus influenzae Rd KW20]
Length = 353
Score = 64.8 bits (156), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 53/138 (38%), Gaps = 10/138 (7%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG-SWLEKHDCDFLIEGH 88
+ + + S+ V F +++P L ++ + + G+
Sbjct: 216 QGAAPVVAAPEVVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGEMSQVKSAKVAVAGY 275
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY--- 143
D +GS ++ L RA +V NYFVA+G++A + T YGK P
Sbjct: 276 TDRIGSDAFNVKLSQERADSVANYFVAKGVAADAISATGYGKANPVTGATCDQVKGRKAL 335
Query: 144 ----AKNRRAIVFLKGCR 157
A +RR + + G +
Sbjct: 336 IACFAPDRRVEIAVNGTK 353
>gi|229523201|ref|ZP_04412608.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae TM
11079-80]
gi|229339564|gb|EEO04579.1| sodium-type flagellar protein MotY precursor [Vibrio cholerae TM
11079-80]
Length = 294
Score = 64.8 bits (156), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Query: 58 SYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYAVFNYFVA 115
S + A + L+ + ++ + L+ + D + N+S L +RA + YF +
Sbjct: 192 SVELNKASQKRLAQIAEYVRYNQDIDLVLVSTYTDSTDTNNNSQNLSEQRAEVLREYFKS 251
Query: 116 RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G+ R++V YGK P KNRR ++ L
Sbjct: 252 IGLPEDRIQVQGYGKRRPIDDNASPIGKDKNRRVVISL 289
>gi|325102935|ref|YP_004272589.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
gi|324971783|gb|ADY50767.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
Length = 668
Score = 64.8 bits (156), Expect = 3e-09, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 43/110 (39%), Gaps = 6/110 (5%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
+++++D Y+IR L+ + + + + H D G + ++ L RA +
Sbjct: 541 NNIYYDFDKYTIRKDAEPELNKVLAFMKKMPYVNIELRAHTDSRGKASYNMLLSENRANS 600
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGH-----DEDAYAKNRRAIVFL 153
+ + G SR+ +G+ + ++ + NRR +
Sbjct: 601 AKLFLLNGGADGSRLLAKGFGETQLLNHCKDGVKCTKEEHQLNRRTEFKV 650
>gi|163787137|ref|ZP_02181584.1| outer membrane protein, OmpA family [Flavobacteriales bacterium
ALC-1]
gi|159877025|gb|EDP71082.1| outer membrane protein, OmpA family [Flavobacteriales bacterium
ALC-1]
Length = 319
Score = 64.8 bits (156), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 50/129 (38%), Gaps = 7/129 (5%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
L + S+ + + F + S+S+ + + LGS E + LIEGH D
Sbjct: 177 GKGLTVEQRDGKVYVSMENKLLFQSGSWSVGTEGRKAVQQLGSVLAENPEISVLIEGHTD 236
Query: 91 ELGSRNS-----SIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYA 144
+ + + + L +RA A+ N IS + G+ P + A
Sbjct: 237 NVPYKGNAQLSGNWDLSAKRATAIVNILRENSAISPENLTAAGRGEFAPIATNSTAEGKA 296
Query: 145 KNRRAIVFL 153
KNRR V L
Sbjct: 297 KNRRIEVVL 305
>gi|145639315|ref|ZP_01794921.1| Outer membrane protein P5 [Haemophilus influenzae PittII]
gi|145271618|gb|EDK11529.1| Outer membrane protein P5 [Haemophilus influenzae PittII]
Length = 361
Score = 64.8 bits (156), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 53/138 (38%), Gaps = 10/138 (7%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG-SWLEKHDCDFLIEGH 88
+ + + S+ V F +++P L ++ + + G+
Sbjct: 224 QGAAPVVAAPEVVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGEMSQVKSAKVAVAGY 283
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY--- 143
D +GS ++ L RA +V NYFVA+G++A + T YGK P
Sbjct: 284 TDRIGSDAFNVKLSQERADSVANYFVAKGVAADAISATGYGKANPVTGATCDQVKGRKAL 343
Query: 144 ----AKNRRAIVFLKGCR 157
A +RR + + G +
Sbjct: 344 IACLAPDRRVEIAVNGTK 361
>gi|89094682|ref|ZP_01167618.1| sodium-type flagellar protein MotY, putative [Oceanospirillum sp.
MED92]
gi|89081028|gb|EAR60264.1| sodium-type flagellar protein MotY, putative [Oceanospirillum sp.
MED92]
Length = 285
Score = 64.8 bits (156), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYA 108
+V F ++ + + A + L + +++ D I+GH+D G R + + RRA
Sbjct: 178 AVLFPSAQWRLSDASRERLDLIALYVKNDDSVKGIYIDGHSDSQGRRLMNRDMSKRRAEE 237
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
V Y ++ G+ + + +G+ P V + + +NRR + L+
Sbjct: 238 VTAYLISIGLDPNMITTRYHGERYPVVPNNSKKNRDRNRRVTIRLE 283
>gi|171322883|ref|ZP_02911587.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
gi|171091749|gb|EDT37280.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
Length = 222
Score = 64.8 bits (156), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 1/110 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLR 104
++ F T ++ PA L L S E + GH D +G+ +++ L R
Sbjct: 112 VNLAGDALFATGLATLTPAARASLDKLLSEREDRTYTQVTVIGHTDSVGNDAANLTLSKR 171
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RA V Y + G++A + V+ G P D A NRR + L+
Sbjct: 172 RAETVAGYLKSHGLNAQTVSVSGRGSADPVASNATPDGRASNRRVDISLQ 221
>gi|157737365|ref|YP_001490048.1| hypothetical protein Abu_1119 [Arcobacter butzleri RM4018]
gi|157699219|gb|ABV67379.1| hypothetical outer membrane protein [Arcobacter butzleri RM4018]
Length = 854
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 53/135 (39%), Gaps = 6/135 (4%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEK 78
D+LD ++P + + ++++ V F+ +S I+ + + + ++
Sbjct: 720 DSLDKCPNTPAGYTVD---ENGCTNTINLEVLFENNSAVIKEETKGKVLSFARYLLDNKE 776
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ D S + L +RA A+ N ++ G+ ASR++ G P
Sbjct: 777 FNTIIEGHASKDPTASAAHNQKLSEQRAAAIKNLLISNGVEASRIQSIGKGHNEPIADNS 836
Query: 139 DEDAYAKNRRAIVFL 153
+ A NRR L
Sbjct: 837 TAEGQALNRRIDAIL 851
>gi|227873541|ref|ZP_03991786.1| conserved hypothetical protein [Oribacterium sinus F0268]
gi|227840631|gb|EEJ51016.1| conserved hypothetical protein [Oribacterium sinus F0268]
Length = 385
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 40/135 (29%), Gaps = 9/135 (6%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHA 89
+ S Q+ D FF S I P + LS + + GH
Sbjct: 111 DGVEVSRGQDYTFVVFKDKAFFAGDSSVITPQGQETLSIFCDTIAPDANKLSQVNVMGHT 170
Query: 90 ---DELGSRNSSIALGLRRAYAVFNYFVAR---GISASRMKVTSYGKEMPSVYGHDEDAY 143
D + N L A + IS ++ YG+ P +
Sbjct: 171 AQADPERANNPRNDRILSVMRAAEVCLFIQGRGIISPDKLVSIGYGQFHPIADNATSEGR 230
Query: 144 AKNRRAIVFLKGCRA 158
AKNRR + L A
Sbjct: 231 AKNRRVEILLIDEGA 245
>gi|163800823|ref|ZP_02194723.1| putative outer membrane protein [Vibrio sp. AND4]
gi|159175172|gb|EDP59969.1| putative outer membrane protein [Vibrio sp. AND4]
Length = 212
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 58/138 (42%), Gaps = 1/138 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
D + + + S + + F S I P +S L +L+++
Sbjct: 56 DLCPETPVGSEIDNDGCGKYSESSQQMQIRILFANDSSRIDPVFAGQISELSDFLKEYPT 115
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++G+ G+ ++AL RRA +V V GI+ R+++ +G+ P+ G DE
Sbjct: 116 TSIELKGYTSITGTNEYNLALSKRRAESVRQELVNNGIAPERLEIVGFGENNPASQGTDE 175
Query: 141 DAYAKNRRAIVFLKGCRA 158
+ A NRR + G +
Sbjct: 176 TSQALNRRVTASVIGYKG 193
>gi|332703401|ref|ZP_08423489.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay]
gi|332553550|gb|EGJ50594.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay]
Length = 249
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 40/113 (35%), Gaps = 6/113 (5%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADE-----LGSRNSSIAL 101
V V F + + VL +L ++ D I G D+ + +
Sbjct: 132 VPSDVMFAPGQVELTTQGVAVLRDLKDLLIKHADQRINIRGFTDDVRPSGNSRFKDNWEI 191
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
R+ V ++ G+ +R+ T P + + A+NRR + L+
Sbjct: 192 SAMRSVNVLRVLMSLGMEPTRLTATGLADLEPLFPNNSTENRARNRRIEITLE 244
>gi|323188374|gb|EFZ73665.1| ompA family protein [Escherichia coli RN587/1]
Length = 127
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 2/123 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF-LIEGHADE 91
+ +S + D++ F + Y + P Q + + + L ++GH D
Sbjct: 2 QSYGFTESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDN 61
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + + L L+RA V + + G + GK+ P A+NRR
Sbjct: 62 YGEDSYNEVLSLKRANVVADAWAIGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVA 121
Query: 151 VFL 153
V +
Sbjct: 122 VVI 124
>gi|157736296|ref|YP_001488979.1| hypothetical protein Abu_0025 [Arcobacter butzleri RM4018]
gi|157698150|gb|ABV66310.1| hypothetical protein, OmpA domain [Arcobacter butzleri RM4018]
Length = 316
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 42/106 (39%), Gaps = 3/106 (2%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
+ F+ S + + E + + GH D G + + RA +
Sbjct: 210 RKISFERKSSIPTEQSQNTIKEIAKILNENPNFKVEVAGHTDSRGEAALNKQISQDRANS 269
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK-NRRAIVFL 153
V N V G++ +R+K YG+E P DE+ ++ NRR +
Sbjct: 270 VKNILVNSGVNETRIKAIGYGEEFPIAK-DDENGLSEINRRVEFII 314
>gi|92119002|ref|YP_578731.1| hypothetical protein Nham_3542 [Nitrobacter hamburgensis X14]
gi|91801896|gb|ABE64271.1| OmpA/MotB [Nitrobacter hamburgensis X14]
Length = 343
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 46/118 (38%), Gaps = 12/118 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLG--------SWLEKHDCDFLIEGHAD----ELGSR 95
VFFDT+ ++ P L + + ++GH D
Sbjct: 223 FQSEVFFDTAQATLLPEGKAELDKVAGALIDLDKQIPHEIAWVLRVDGHTDVRPISSPVF 282
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA +V Y V+ G+ R+ +G+ P G EDAY +NRR + L
Sbjct: 283 KSNWELSSARAISVVQYLVSLGVPPQRLVAAGFGEFQPLDPGTTEDAYKRNRRIELKL 340
>gi|329124105|ref|ZP_08252652.1| outer membrane protein A [Haemophilus aegyptius ATCC 11116]
gi|327467530|gb|EGF13028.1| outer membrane protein A [Haemophilus aegyptius ATCC 11116]
Length = 348
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 56/138 (40%), Gaps = 10/138 (7%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGH 88
+ + + S+ V F +++P L ++ + + ++ G+
Sbjct: 211 QGAAPVVAAPEMVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGQMSQVKSAKVVVAGY 270
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY--- 143
D +GS ++ L +RA +V NYFVA+G++A + T YGK P
Sbjct: 271 TDRIGSDAFNVKLSQKRADSVANYFVAKGVAADAISATGYGKANPVTGATCDQVKGRKAL 330
Query: 144 ----AKNRRAIVFLKGCR 157
A +RR + + G +
Sbjct: 331 IACLAPDRRVEIAVNGTK 348
>gi|302339083|ref|YP_003804289.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293]
gi|301636268|gb|ADK81695.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293]
Length = 384
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 48/118 (40%), Gaps = 2/118 (1%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
E ++ + + F I P ++ L L + D FL+ GH ++G++
Sbjct: 266 VEERSEGVVLTLPN-IHFKPDEAEILPQEVSRLDELARVLSQIRDTSFLVVGHTADVGTK 324
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S L + RA + + RG+ SR G P +E+ KNRR +FL
Sbjct: 325 ESQKELSVDRARRIISELSQRGLDESRFLYDGVGGTQPVASNDNEEGRKKNRRVEIFL 382
>gi|255037333|ref|YP_003087954.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
18053]
gi|254950089|gb|ACT94789.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
Length = 366
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 45/128 (35%), Gaps = 2/128 (1%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSS-YSIRPADIQVLSNLGSWLEKHDCD-FLI 85
I+ P + S D + S Y + L ++ ++ ++ I
Sbjct: 231 IARPVAAVANVESPALKGISASDKTLYFPRSDYKLPMQSRTYLDSVAMYILENKNKGLRI 290
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
GH D +G+ + ++ L R + Y + +G+ + G P E+
Sbjct: 291 TGHTDNVGNPSLNLTLSEYRVRVISRYLIGKGVPEGVIAAVGVGSRFPVRPNDSEENRRM 350
Query: 146 NRRAIVFL 153
NRR V +
Sbjct: 351 NRRVEVQI 358
>gi|171319197|ref|ZP_02908315.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
gi|171095577|gb|EDT40539.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
Length = 214
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 48/142 (33%), Gaps = 10/142 (7%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ + + + +V F +S ++P +L L L +
Sbjct: 58 AQQRKSLEQALAGPLAAGRVTLVNGRIGISGAVLFALNSDQLQPEGRDLLKTLAGPLAAY 117
Query: 80 DCD----FLIEGHADELG------SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
++ G AD+ + L +RA V + G+ A + ++G
Sbjct: 118 LTTRDEILMVSGFADDQQVRAGNRQFADNWELSAKRALTVTRALIDAGVPARSVFAAAFG 177
Query: 130 KEMPSVYGHDEDAYAKNRRAIV 151
E P D++ AKNRR +
Sbjct: 178 SEQPVSSNADDEGRAKNRRVEI 199
>gi|146281899|ref|YP_001172052.1| putative outer membrane protein [Pseudomonas stutzeri A1501]
gi|145570104|gb|ABP79210.1| putative outer membrane protein [Pseudomonas stutzeri A1501]
Length = 229
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/179 (16%), Positives = 55/179 (30%), Gaps = 26/179 (14%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESS---------------LQEQFS 45
M ++ + +++ + V + + +F
Sbjct: 21 MNLLKSASLILCMIVIAGCSSKGEKKPSEAAAPVAPKVDYAWLDEYEPKLRDALVDSRFE 80
Query: 46 SSVGDSVFFDT---SSYSIRPADIQVLSNLGSWL--------EKHDCDFLIEGHADELGS 94
D+V T S +L + + +I GHAD G+
Sbjct: 81 VERRDNVLVVTAPVDSSFNPDRPGMLLPVTLGPITRVAKLVEKDEKTAVVILGHADSTGA 140
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ + + RA AV F G R+++ G +MP ++ A NRR + L
Sbjct: 141 DDVNRTISRERASAVAAIFRLSGFKHDRLRIRGLGSDMPRAANDSKEGRAMNRRVEMVL 199
>gi|190574725|ref|YP_001972570.1| hypothetical protein Smlt2808 [Stenotrophomonas maltophilia K279a]
gi|190012647|emb|CAQ46275.1| putative OmpA family membrane protein [Stenotrophomonas maltophilia
K279a]
Length = 212
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 49/131 (37%), Gaps = 10/131 (7%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD----FLIE 86
+ + SV F +S ++P ++L +L + L + ++
Sbjct: 70 AGPLAAGRVTLVDGRIGISGSVLFALNSDQLQPEGQELLRSLAAPLAAYLGSREEILMVS 129
Query: 87 GHADE------LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
G D+ + L +R+ V +A G+ A + ++G E P +E
Sbjct: 130 GFTDDAPVREGNRRFADNWELSAQRSLTVTRTLIADGVPADAVFAAAFGSEQPVSSNANE 189
Query: 141 DAYAKNRRAIV 151
+ A+NRR +
Sbjct: 190 EGRARNRRVEI 200
>gi|29346604|ref|NP_810107.1| OmpA family outer membrane protein [Bacteroides thetaiotaomicron
VPI-5482]
gi|29338500|gb|AAO76301.1| outer membrane protein, OmpA family [Bacteroides thetaiotaomicron
VPI-5482]
Length = 266
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 53/143 (37%), Gaps = 11/143 (7%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW--LE 77
+ + +++ + + + F T + ++ A LS + +
Sbjct: 107 AAAEAKQIEGAQVEQITDNNGLQAVKVTFDSGILFTTGNATLSAAAKSALSKFANNVLNQ 166
Query: 78 KHDCDFLIEGHADEL--------GSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSY 128
D D I G+ D SR ++ L RA +V +Y + G+S++++K V
Sbjct: 167 NRDMDVSIYGYTDNQGWRNSTAEQSRQKNLNLSQERAQSVASYLLNCGVSSNQIKGVQGM 226
Query: 129 GKEMPSVYGHDEDAYAKNRRAIV 151
G+ P +NRR V
Sbjct: 227 GESDPIASNDTAAGREQNRRVEV 249
>gi|325953665|ref|YP_004237325.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
gi|323436283|gb|ADX66747.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
Length = 218
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 2/106 (1%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYA 108
D V+FD + I + + N+ L+ + I G+ D G + + RA
Sbjct: 110 DRVYFDINKSVITDNSLIQIDNIAKILKAYPTATLKIGGYTDNTGDAAINKKISTNRADE 169
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVY-GHDEDAYAKNRRAIVFL 153
V V +GISA+R+ YG + + A+NRR + +
Sbjct: 170 VAKALVNKGISANRISTEGYGDQHFLCEANDTDLCRAQNRRVDIRI 215
>gi|226330649|ref|ZP_03806167.1| hypothetical protein PROPEN_04569 [Proteus penneri ATCC 35198]
gi|225201444|gb|EEG83798.1| hypothetical protein PROPEN_04569 [Proteus penneri ATCC 35198]
Length = 167
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 60/127 (47%), Gaps = 12/127 (9%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS---WLEKHDCDFLIEGHADELGSRNSS 98
E + ++ V F+ + +++ + L+ L + ++ ++ G+ D +GS+N +
Sbjct: 32 ENKTFTLRSDVLFNFNKSTLKAEGQEALNGLYNELANIDPTQGRVVVIGYTDRIGSQNYN 91
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRA 149
+ L +RA +V +Y V++GI A+ + GKE P + A A +RR
Sbjct: 92 LPLSEKRAQSVVDYLVSKGIPANSISAEGRGKENPVTGNTCDNVKARSALIDCLAPDRRV 151
Query: 150 IVFLKGC 156
+ ++G
Sbjct: 152 EIEIQGT 158
>gi|260062810|ref|YP_003195890.1| putative flagellar motor protein MotB [Robiginitalea biformata
HTCC2501]
gi|88784378|gb|EAR15548.1| putative flagellar motor protein MotB [Robiginitalea biformata
HTCC2501]
Length = 287
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 62/146 (42%), Gaps = 7/146 (4%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFS-SSVGDSVFFDTSSYSIRPADIQVLSNLG 73
++++ + +L + + D E S+++ S+ D + F + SY++ A VL +
Sbjct: 120 SVNLALVQSLKGVLGNLDDEDIEISVEKGVVFVSISDKLLFSSGSYNVTNAAKNVLGKVA 179
Query: 74 SW-LEKHDCDFLIEGHADELGSRN----SSIALGLRRAYAVFNYFVARG-ISASRMKVTS 127
K D +F++EGH D + R+ + L +RA +V + +RM
Sbjct: 180 QVVNNKPDFEFMVEGHTDNVPYRSGVLLDNWDLSAKRATSVVRILQNDFGVDPARMTAAG 239
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFL 153
+P AKNRR + +
Sbjct: 240 RSYYVPLASNDTAANRAKNRRTRIVV 265
>gi|305665970|ref|YP_003862257.1| OmpA domain-containing protein [Maribacter sp. HTCC2170]
gi|88710745|gb|EAR02977.1| OmpA domain protein [Maribacter sp. HTCC2170]
Length = 301
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 5/123 (4%)
Query: 36 NESSLQEQFSSSVGDSVFFDTSSYSIRP----ADIQVLSNLGSWLEKHDCDF-LIEGHAD 90
+ L + + G+ + + ++ Q +N+ +L+K D I GH D
Sbjct: 178 ADEQLADIYQRIKGNPISLEFNTAEASINLRAEQRQKFANISRYLDKEDDAVANIVGHTD 237
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G R+++I LG RA +Y + GI SR+ TS G + P E+ AKNRR +
Sbjct: 238 NTGQRDANIKLGQERADFAKSYLMRNGIPESRINATSKGPDEPIASNDTEEGRAKNRRTV 297
Query: 151 VFL 153
+ L
Sbjct: 298 ITL 300
>gi|315637079|ref|ZP_07892302.1| conserved hypothetical protein [Arcobacter butzleri JV22]
gi|315478615|gb|EFU69325.1| conserved hypothetical protein [Arcobacter butzleri JV22]
Length = 854
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 53/135 (39%), Gaps = 6/135 (4%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEK 78
D+LD ++P + + ++++ V F+ +S I+ + + + ++
Sbjct: 720 DSLDKCPNTPAGYTVD---ENGCTNTINLEVLFENNSAVIKEETKGKVLSFARYLVDNKE 776
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ D S + L +RA A+ N ++ G+ ASR++ G P
Sbjct: 777 FNTIIEGHASKDPTASAAHNQKLSEQRASAIKNLLISNGVEASRIQSIGKGHNEPIADNS 836
Query: 139 DEDAYAKNRRAIVFL 153
+ A NRR L
Sbjct: 837 TAEGQALNRRIDAIL 851
>gi|229903102|ref|ZP_04518216.1| Outer membrane protein A precursor [Yersinia pestis Nepal516]
gi|229679844|gb|EEO75946.1| Outer membrane protein A precursor [Yersinia pestis Nepal516]
Length = 205
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 60/145 (41%), Gaps = 12/145 (8%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDC 81
D + + + ++ V F + +++P Q L L + ++ D
Sbjct: 53 DAAAPIVAPTPAPAPIVDTKRFTLKSDVLFGFNKANLKPEGQQALDQLYAQLSSIDPKDG 112
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE- 140
++ G AD +G ++AL RRA +V +Y V++GI A ++ G+ P +
Sbjct: 113 SVVVLGFADRIGQPAPNLALSQRRADSVRDYLVSKGIPADKITARGEGQANPVTGNTCDN 172
Query: 141 --------DAYAKNRRAIVFLKGCR 157
+ A +RR + +KG +
Sbjct: 173 VKPRAALIECLAPDRRVEIEVKGYK 197
>gi|197337668|ref|YP_002157566.1| OmpA/MotB domain protein [Vibrio fischeri MJ11]
gi|197314920|gb|ACH64369.1| OmpA/MotB domain protein [Vibrio fischeri MJ11]
Length = 341
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 24/101 (23%), Positives = 48/101 (47%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
+F +S + +++ L + + ++ G+ D +GS S+ L +RA +V +
Sbjct: 230 YFSFASSKVNTGSLELQKVLHILKKYPQSNLILTGNTDSIGSYASNQRLSQKRANSVARF 289
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
F RGIS SR+ V + G+ P + ++N R + +
Sbjct: 290 FTDRGISISRITVRADGETNPVASNITAEGRSQNLRVDMNI 330
>gi|145627861|ref|ZP_01783662.1| Outer membrane protein P5 [Haemophilus influenzae 22.1-21]
gi|144979636|gb|EDJ89295.1| Outer membrane protein P5 [Haemophilus influenzae 22.1-21]
Length = 358
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 53/138 (38%), Gaps = 10/138 (7%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG-SWLEKHDCDFLIEGH 88
+ + + S+ V F +++P L ++ + + G+
Sbjct: 221 QGAAPVVAAPEVVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGEMSQVKSAKVAVAGY 280
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY--- 143
D +GS ++ L RA +V NYFVA+G++A + T YGK P
Sbjct: 281 TDRIGSDAFNVKLSQERADSVANYFVAKGVAADAISATGYGKANPVTGATCDQVKGRKAL 340
Query: 144 ----AKNRRAIVFLKGCR 157
A +RR + + G +
Sbjct: 341 IACLAPDRRVEIAVNGTK 358
>gi|107027050|ref|YP_624561.1| hypothetical protein Bcen_4708 [Burkholderia cenocepacia AU 1054]
gi|116691753|ref|YP_837286.1| hypothetical protein Bcen2424_3655 [Burkholderia cenocepacia
HI2424]
gi|170736247|ref|YP_001777507.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
MC0-3]
gi|254248991|ref|ZP_04942311.1| Flagellar motor protein [Burkholderia cenocepacia PC184]
gi|105896424|gb|ABF79588.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
gi|116649753|gb|ABK10393.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424]
gi|124875492|gb|EAY65482.1| Flagellar motor protein [Burkholderia cenocepacia PC184]
gi|169818435|gb|ACA93017.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3]
Length = 214
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 53/142 (37%), Gaps = 10/142 (7%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS----NLGSW 75
+ + + + +V F +S ++PA +L L ++
Sbjct: 58 AQQRKSLEQALAGPLAAGRVTLVNGRIGISGNVLFALNSDQLQPAGRDLLKTLAGPLATY 117
Query: 76 LEKHDCDFLIEGHADELGSRN------SSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
L+ D +I G AD+ + L +RA V + G+ AS + ++G
Sbjct: 118 LKTRDEILMISGFADDQQVHAGNRLFADNWELSAKRALTVTRAMIDAGVPASSVFAAAFG 177
Query: 130 KEMPSVYGHDEDAYAKNRRAIV 151
E P D++ AKNRR +
Sbjct: 178 SEQPVSSNADDEGRAKNRRVEI 199
>gi|239832801|ref|ZP_04681130.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239825068|gb|EEQ96636.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 343
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 47/119 (39%), Gaps = 13/119 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIEGHADELG-----S 94
V F T S I PA + L + + + + ++GH D +
Sbjct: 222 FQSEVLFPTGSSDINPAGQDEMKKLADAVNQLNQEIPDDINWVLRVDGHTDNVPLAGTGR 281
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA AV + +A G+ A+R+ +G+ P DA AKNRR + L
Sbjct: 282 FRDNWELSSARATAVVKFLIANGVPANRLVAAGFGEYQPLDASDTADARAKNRRIELKL 340
>gi|260885301|ref|ZP_05734718.2| lipoprotein PG3 [Prevotella tannerae ATCC 51259]
gi|260852896|gb|EEX72765.1| lipoprotein PG3 [Prevotella tannerae ATCC 51259]
Length = 234
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 47/124 (37%), Gaps = 10/124 (8%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL--------GS 94
+ + F T + + L+ L D + G+ D S
Sbjct: 100 YVKVTFPSGLLFQTGQDVLSSSARNDLATFAKNLTSDM-DLYVYGYTDNQGWRGASASES 158
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
N + L +RA +V +Y + GIS+S+M +V +G+ P +NRR V++
Sbjct: 159 MNKNQVLSEQRANSVSSYLRSNGISSSQMKEVKGFGESNPVASNDSSTGREQNRRVEVYV 218
Query: 154 KGCR 157
+
Sbjct: 219 MPSK 222
>gi|308126356|ref|ZP_07663725.1| OmpA family protein [Vibrio parahaemolyticus AQ4037]
gi|308109333|gb|EFO46873.1| OmpA family protein [Vibrio parahaemolyticus AQ4037]
Length = 290
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 3/111 (2%)
Query: 46 SSVGDSVF-FDTSSYSIRPADIQVLSNLGSW--LEKHDCDFLIEGHADELGSRNSSIALG 102
S D V F ++ Q L+ L S+ ++ LI+GHAD +G R +++++
Sbjct: 153 SQARDIVLPFQFGQKTLNATQQQTLAALYSYLSVDDRVTKVLIDGHADNVGPRLTNLSVS 212
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA V + +A G++ + ++V S+G P + AKNRR + L
Sbjct: 213 RLRAQQVADALIAHGVNPNIIEVRSHGDRYPVANNNTAAGQAKNRRVTLRL 263
>gi|126664571|ref|ZP_01735555.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Marinobacter sp. ELB17]
gi|126630897|gb|EBA01511.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Marinobacter sp. ELB17]
Length = 147
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 42/100 (42%), Gaps = 4/100 (4%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
+ + + + AD+ +L+ G + + GH+D G+ + L RA AV
Sbjct: 38 HYGYNKHQLSAADMDMLTRHGHYLRRNVHLHVRVHGHSDAFGTDDYGHFLSRMRASAVVR 97
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ + G+ R+K +G + P +A NRR +
Sbjct: 98 FLIEEGVEEQRLKAVGWGSDRPLA---TRADHAANRRVEL 134
>gi|170722410|ref|YP_001750098.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619]
gi|169760413|gb|ACA73729.1| OmpA/MotB domain protein [Pseudomonas putida W619]
Length = 383
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 42/122 (34%), Gaps = 4/122 (3%)
Query: 34 VLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADEL 92
E + + FD S ++P ++L N L + +I GHAD
Sbjct: 246 QAKEPPTSDPIQLDSLN--LFDPGSDELKPGSTKLLVNALVGIKAQPGWLIVISGHADAR 303
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
G ++ L RA AV ++ G V P + A+NRR +
Sbjct: 304 GDAAKNLDLSRARASAVRDWMQRMGDIPDSCFAVQGVAASQPVSSNDTVNGRAENRRVDI 363
Query: 152 FL 153
L
Sbjct: 364 RL 365
>gi|129136|sp|P09146|OMPA_ENTAE RecName: Full=Outer membrane protein A; Flags: Precursor
gi|40838|emb|CAA25062.1| unnamed protein product [Enterobacter aerogenes]
Length = 350
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 57/123 (46%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L L + ++ D ++ G+ D +GS + L
Sbjct: 220 TLKSDVLFNFNKATLKPEGQQALDQLYTQLSNMDPKDGSAVVLGYTDRIGSEQYNQKLSE 279
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
+RA +V +Y VA+GI A+++ G+ P + A A +RR + +K
Sbjct: 280 KRAQSVVDYLVAKGIPANKISARGMGESDPVTGNTCDNVKARAALIDCLAPDRRVAIEVK 339
Query: 155 GCR 157
G +
Sbjct: 340 GYK 342
>gi|329894187|ref|ZP_08270142.1| Flagellar motor rotation protein MotB [gamma proteobacterium
IMCC3088]
gi|328923212|gb|EGG30533.1| Flagellar motor rotation protein MotB [gamma proteobacterium
IMCC3088]
Length = 341
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 47/118 (39%), Gaps = 6/118 (5%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG-----SRN 96
++ + + FD+ S +++ + LS LG+ L ++ LIEGH D +
Sbjct: 221 DKIIVRLANQGSFDSGSATLKNSFGGTLSKLGNTLSRYSGSVLIEGHTDNVPVGFSERFK 280
Query: 97 SSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA AV +Y + + + Y P A NRR V +
Sbjct: 281 SNWDLSASRAAAVADYLLTSTPLQGGSVMIKGYADSKPLDTNDSPVGRANNRRIEVIV 338
>gi|259090537|gb|ACV91891.1| OprL [Pseudomonas fluorescens]
gi|259090541|gb|ACV91893.1| OprL [Pseudomonas fluorescens]
Length = 156
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/123 (30%), Positives = 65/123 (52%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+T + SL E+ + + +F+ S ++P ++ L L+ +
Sbjct: 34 AVDPNAGYGANTGAVDGSLSEEAALRAITTFYFEYDSSDLKPEAMRALDVHAKDLKANGA 93
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
++EG+ DE G+R ++ALG RRA AV Y V +G+S +++++ SYGKE P GHD
Sbjct: 94 RVVLEGNTDERGTREYNMALGERRAKAVQRYLVLQGVSPAQLELVSYGKERPVATGHDXQ 153
Query: 142 AYA 144
++A
Sbjct: 154 SWA 156
>gi|300778373|ref|ZP_07088231.1| inorganic diphosphatase [Chryseobacterium gleum ATCC 35910]
gi|300503883|gb|EFK35023.1| inorganic diphosphatase [Chryseobacterium gleum ATCC 35910]
Length = 909
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
++++F+T S ++P L+ L + + G+ D G+ S+++L RA
Sbjct: 801 ENLYFETGSSDLKPGYELQLNTLAEILNAYPNLKIKLGGYTDNSGNEESNLSLSNLRAQT 860
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVY-GHDEDAYAKNRRAIVFL 153
+ G+SA R++ YG + P ++ AKNRR V +
Sbjct: 861 AKLKLLELGVSADRIEAEGYGSQHPVCEANDTDECKAKNRRIDVRV 906
>gi|90422320|ref|YP_530690.1| hypothetical protein RPC_0800 [Rhodopseudomonas palustris BisB18]
gi|90104334|gb|ABD86371.1| OmpA/MotB [Rhodopseudomonas palustris BisB18]
Length = 341
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 46/113 (40%), Gaps = 11/113 (9%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIEGHADELGS---RNSSIA 100
VFFDT ++P L L S L D ++GH D S+
Sbjct: 226 VFFDTGQAQLKPEGRAELDKLASALIDLDKKIPAEIAWVLRVDGHTDVRPITGAFKSNWE 285
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V Y V+ G+ R+ +G+ P E+AY +NRR + L
Sbjct: 286 LSSGRAISVVQYLVSLGVPPQRLVAAGFGEFQPLDVAATEEAYKRNRRIELKL 338
>gi|295097172|emb|CBK86262.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 146
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 7/143 (4%)
Query: 19 SGIDNLDTKISSPDTVLN-----ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
SG + +P+ + + L +S + D + FD + +RP + +
Sbjct: 2 SGCQSSPEGKFTPEQIAAMKSYGFNELNGDWSLGLSDKILFDKNDARLRPESETQIQTMA 61
Query: 74 SWLEKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKE 131
S L + ++GH D G + + AL L+RA V + + + GK+
Sbjct: 62 SRLAATGLNHARMDGHTDNYGEESYNEALSLKRANVVADAWAKGANIPRSNLTTRGLGKK 121
Query: 132 MPSVYGHDEDAYAKNRRAIVFLK 154
P A+NRR V +
Sbjct: 122 YPISSNRTAQGRAENRRVAVVIS 144
>gi|108761081|ref|YP_635504.1| OmpA family protein [Myxococcus xanthus DK 1622]
gi|108464961|gb|ABF90146.1| OmpA family protein [Myxococcus xanthus DK 1622]
Length = 352
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 2/114 (1%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLR 104
+ + + F + +++P L N+ L H IEGH D G + + L
Sbjct: 237 ELLERITFAPGTAALQPRVQPALDNVADVLLVHPRLGVIAIEGHTDNRGDPDVQREVTLA 296
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
RA AV +Y V RG+ R++ +G + P NRR + + R
Sbjct: 297 RAEAVRDYLVERGVPPDRLEAWGFGPDKPVESNETAQGREANRRLDLRVVAPRG 350
>gi|91975364|ref|YP_568023.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
gi|91681820|gb|ABE38122.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
Length = 464
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 2/134 (1%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVG-DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
D + + ++ + Q+ F+ +G +V FD++S SI +L L +
Sbjct: 331 KADLSVKPAASPVDATVCQQLFNDLLGKSTVRFDSASASIDKDSAGLLDRLIETAMRCPG 390
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ GH D G S+ AL RRA AV +Y V G+S R + YG ++P +
Sbjct: 391 AAIEVAGHTDSAGEAGSNQALSERRARAVVDYMVRAGLSPERFRAFGYGSKIPLEGNETD 450
Query: 141 DAYAKNRRAIVFLK 154
AKNRR ++
Sbjct: 451 AGKAKNRRIDFMIR 464
>gi|260061280|ref|YP_003194360.1| OmpA family protein [Robiginitalea biformata HTCC2501]
gi|88785412|gb|EAR16581.1| OmpA family protein [Robiginitalea biformata HTCC2501]
Length = 832
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 7/109 (6%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADELGSRNSSIALGLRRAYAVF 110
++F+ ++IR + L L + ++++ + IE H D GS + L RA +
Sbjct: 721 IYFNFDKHNIRSDAAEELDKLVAVMQEYPSMVIAIESHTDSRGSSVYNRYLSDLRAKSTR 780
Query: 111 NYFVARGISASRM-KVTSYGKEMPSVYGH-----DEDAYAKNRRAIVFL 153
Y + GI SR+ YG++ + NRR+ +
Sbjct: 781 AYLIENGIDPSRIQSAKGYGEDRLLNDCDGSVRCTSQQHQLNRRSEFIV 829
>gi|332667996|ref|YP_004450784.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332336810|gb|AEE53911.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 542
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 4/128 (3%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK-HDCDFLIE 86
+ + + S + V F + A Q L+ + +K + I
Sbjct: 416 VVTVAKTPEPKTEAPTPSQNTAARVLFAFDQAVLNEAARQELAAVAEAAKKANRYTLTII 475
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
GH D+ G+ + L RRA AV +YF A+G++A K+ + G+ +P+V E AKN
Sbjct: 476 GHTDDAGAAEYNQQLSERRAKAVADYFAAQGLTA---KIAAKGELVPAVTNDSEGNKAKN 532
Query: 147 RRAIVFLK 154
RR V L+
Sbjct: 533 RRVEVVLE 540
>gi|206562551|ref|YP_002233314.1| hypothetical protein BCAM0690 [Burkholderia cenocepacia J2315]
gi|198038591|emb|CAR54550.1| putative outer membrane protein-OmpA family [Burkholderia
cenocepacia J2315]
Length = 214
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 53/142 (37%), Gaps = 10/142 (7%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS----NLGSW 75
+ + + + +V F +S ++PA +L L ++
Sbjct: 58 AQQRKSLEQALAGPLAAGRVTLVNGRIGISGNVLFALNSDQLQPAGRDLLKTLAVPLATY 117
Query: 76 LEKHDCDFLIEGHADELGSRN------SSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
L+ D ++ G AD+ + L +RA V + G+ AS + ++G
Sbjct: 118 LKTRDEILMVSGFADDQQVHAGNRLFADNWELSAKRALTVTRALIDAGVPASSVFAAAFG 177
Query: 130 KEMPSVYGHDEDAYAKNRRAIV 151
E P D++ AKNRR +
Sbjct: 178 SEQPVSSNADDEGRAKNRRVEI 199
>gi|218778866|ref|YP_002430184.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01]
gi|218760250|gb|ACL02716.1| OmpA/MotB domain-containing protein [Desulfatibacillum alkenivorans
AK-01]
Length = 281
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/157 (20%), Positives = 52/157 (33%), Gaps = 27/157 (17%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGH 88
+ ++ S S+ D + F+ + SI+P+ L+ L + + +I GH
Sbjct: 100 AESSNQVDIRSTGNGSLISIRDQLLFEDGASSIKPSAKAFLTRLAEIINADNFPVVITGH 159
Query: 89 ADELGSR----NSSIALGLRRAYAVFNYFVARG----------------------ISASR 122
D+ S+ L RRA AV+ +F + R
Sbjct: 160 TDDRPPEEKGVQSNWELSARRAMAVYRFFYDQYLEQLAAREREANGGVAPVNLPNKYPKR 219
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
+ V G P A N R + L RAN
Sbjct: 220 IDVYGCGPSQPVASNDTPQTRALNNRVEI-LMDKRAN 255
>gi|224436415|ref|ZP_03657435.1| flagellar motor protein MotB [Helicobacter cinaedi CCUG 18818]
gi|313142933|ref|ZP_07805126.1| flagellar motor protein MotB [Helicobacter cinaedi CCUG 18818]
gi|313127964|gb|EFR45581.1| flagellar motor protein MotB [Helicobacter cinaedi CCUG 18818]
Length = 250
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 51/147 (34%), Gaps = 9/147 (6%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVL---S 70
+ S + + + + + + E ++ S + ++FF++ S I +D+ +
Sbjct: 82 AISQTSSVTTAEIQQMAEEGGILEQ-MEMGLSLRLPSNLFFESGSAEINNSDVYLYLQRM 140
Query: 71 NLGSWLEKHDCDFLIEGHADE-----LGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
+ G+ D + L R+ AV + GIS R+
Sbjct: 141 TAIIKKLPDYVKIDVRGYTDNASLPIGSRYKDNYELSSARSLAVMKNLIKNGISPERISF 200
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ YG+ AKN R +F
Sbjct: 201 SGYGEHQAVAPNDSTINRAKNNRVEIF 227
>gi|153875989|ref|ZP_02003535.1| conserved hypothetical protein [Beggiatoa sp. PS]
gi|152067548|gb|EDN66466.1| conserved hypothetical protein [Beggiatoa sp. PS]
Length = 58
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+RRA V NY + RGI++ R+ +G++ P +NRR + +
Sbjct: 1 MRRAKTVRNYLINRGINSERLIAKGFGEKQPIATNATNAGRQQNRRVEIII 51
>gi|327480142|gb|AEA83452.1| putative outer membrane protein [Pseudomonas stutzeri DSM 4166]
Length = 209
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/179 (16%), Positives = 55/179 (30%), Gaps = 26/179 (14%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESS---------------LQEQFS 45
M ++ + +++ + V + + +F
Sbjct: 1 MNLLKSASLILCMIVIAGCSSKGEKKPSEAAAPVAPKVDYAWLDEYEPKLRDALVDSRFE 60
Query: 46 SSVGDSVFFDT---SSYSIRPADIQVLSNLGSWL--------EKHDCDFLIEGHADELGS 94
D+V T S +L + + +I GHAD G+
Sbjct: 61 VERRDNVLVVTAPVDSSFNPDRPGMLLPVTLGPITRVAKLVEKDEKTAVVILGHADSTGA 120
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ + + RA AV F G R+++ G +MP ++ A NRR + L
Sbjct: 121 DDVNRTISRERASAVAAIFRLSGFKHDRLRIRGLGSDMPRAANDSKEGRAMNRRVEMVL 179
>gi|260432828|ref|ZP_05786799.1| OmpA/MotB domain protein [Silicibacter lacuscaerulensis ITI-1157]
gi|260416656|gb|EEX09915.1| OmpA/MotB domain protein [Silicibacter lacuscaerulensis ITI-1157]
Length = 580
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 42/120 (35%), Gaps = 14/120 (11%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH--------DCDFLIEGHADELG-----S 94
V FD S + + ++ + L + ++GH D +
Sbjct: 458 FSSEVLFDPGSAVLSDEGKREIAKVAEILRSVAAEIPPELNWVIRVDGHTDNIPVSGAGR 517
Query: 95 RNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA +V Y GI +R+ +G+ P +A AKNRR + L
Sbjct: 518 YRDNWELSQGRALSVVRYMVEELGIPPNRLAANGFGEFQPVDTADTPEARAKNRRIELKL 577
>gi|165977295|ref|YP_001652888.1| major outer membrane protein [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|190151211|ref|YP_001969736.1| outer membrane protein P5 precursor (OMP P5) [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|303250896|ref|ZP_07337088.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|303252762|ref|ZP_07338923.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|307248928|ref|ZP_07530938.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
gi|307253541|ref|ZP_07535410.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|307257957|ref|ZP_07539710.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|307264561|ref|ZP_07546144.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|165877396|gb|ABY70444.1| major outer membrane protein [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|189916342|gb|ACE62594.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|302648412|gb|EFL78607.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|302650246|gb|EFL80410.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306854539|gb|EFM86732.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
gi|306858989|gb|EFM91033.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|306863504|gb|EFM95434.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|306870090|gb|EFN01851.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
Length = 364
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/155 (20%), Positives = 57/155 (36%), Gaps = 12/155 (7%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
IS + + V + E + + V F +++PA L + + +
Sbjct: 209 ISSVSAGLSYRFGQGAVPVAAPAVETKNFAFSSDVLFAFGKSNLKPAAATALDAMQTEIN 268
Query: 78 KHDCD---FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
+ G+ D +G S++ L RRA V NY V++G A+ + YG+ P
Sbjct: 269 NAGLSNAAIQVNGYTDRIGKEASNLKLSQRRAETVANYIVSKGAPAANVTAVGYGEANPV 328
Query: 135 --VYGHDEDAY-------AKNRRAIVFLKGCRANT 160
A +RR V ++G + T
Sbjct: 329 TGATCDKVKGRKALIACLAPDRRVEVQVQGTKEVT 363
>gi|145298369|ref|YP_001141210.1| flagellar motor protein MotB [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142851141|gb|ABO89462.1| Flagellar motor protein MotB [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 305
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 59/147 (40%), Gaps = 10/147 (6%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQE------QFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + +DT++ L E+ + + + + + F + S + VL+
Sbjct: 110 GTTLATIDTQLQENMGSLVEAGVVKLTLDDNWLTVELSSGLLFGSGSAFMSTNAEPVLNT 169
Query: 72 LGSWLEKHDCDFLIEGHADELGSRNS----SIALGLRRAYAVFNYFVARGISASRMKVTS 127
L S L+ D + G+ D N + L RA AV +A+G++ R+ +
Sbjct: 170 LSSILKPVDNYVRVRGYTDNQQINNEIFRSNWTLSAARAEAVLTALIAKGVAPQRLAYEA 229
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFLK 154
YG+ P E +NR+ +V +
Sbjct: 230 YGEFSPFAGNDSEQGRLQNRKVVVAIS 256
>gi|124004728|ref|ZP_01689572.1| OmpA family protein [Microscilla marina ATCC 23134]
gi|123989851|gb|EAY29380.1| OmpA family protein [Microscilla marina ATCC 23134]
Length = 513
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 43/103 (41%), Gaps = 2/103 (1%)
Query: 54 FDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F S + +L ++ +E + + + GH +G++ ++ L +RA AV Y
Sbjct: 403 FKLGSDELDEKSKALLDSVAQKMMEFPEAEIEVSGHTCNIGTKAGNLRLSKKRAEAVRKY 462
Query: 113 FVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ I R+K Y P V +E KNRR ++
Sbjct: 463 LMEYDGIDPKRIKTAGYADNRPLVPNVNEPNRKKNRRVAFKMR 505
>gi|172062592|ref|YP_001810243.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6]
gi|171995109|gb|ACB66027.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6]
Length = 214
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 48/142 (33%), Gaps = 10/142 (7%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ + + + +V F +S ++P +L L L +
Sbjct: 58 AQQRKSLEQALAGPLAAGRVTLVNGRIGISGAVLFALNSDQLQPDGRDLLKTLAGPLAAY 117
Query: 80 DCD----FLIEGHADELG------SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
+I G AD+ + L +RA V + G+ A + ++G
Sbjct: 118 LTTRDEILMISGFADDQQVRAGNRQFADNWELSAKRALTVTRALIDAGVPARSVFAAAFG 177
Query: 130 KEMPSVYGHDEDAYAKNRRAIV 151
E P D++ AKNRR +
Sbjct: 178 SEQPVSSNADDEGRAKNRRVEI 199
>gi|28898885|ref|NP_798490.1| sodium-type flagellar protein MotY [Vibrio parahaemolyticus RIMD
2210633]
gi|1170999|sp|P46233|MOTY_VIBPA RecName: Full=Sodium-type flagellar protein motY; Flags: Precursor
gi|497129|gb|AAA21574.1| MotY [Vibrio parahaemolyticus]
gi|28807104|dbj|BAC60374.1| sodium-type flagellar protein MotY [Vibrio parahaemolyticus RIMD
2210633]
gi|328474556|gb|EGF45361.1| sodium-type flagellar protein MotY [Vibrio parahaemolyticus 10329]
Length = 293
Score = 64.8 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Query: 59 YSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
+ A + L+ + ++ + L+ + D ++ S +L RRA ++ YF +
Sbjct: 192 DQLTKASKKRLAQIADYVRHNQDIDLVLVATYTDSTDGKSESQSLSERRAESLRTYFESL 251
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G+ R++V YGK P KNRR ++ L
Sbjct: 252 GLPEDRIQVQGYGKRRPIADNGTPIGKDKNRRVVISL 288
>gi|332532726|ref|ZP_08408600.1| outer membrane protein similar to peptidoglycan-associated
(lipo)protein [Pseudoalteromonas haloplanktis ANT/505]
gi|332037753|gb|EGI74203.1| outer membrane protein similar to peptidoglycan-associated
(lipo)protein [Pseudoalteromonas haloplanktis ANT/505]
Length = 351
Score = 64.4 bits (155), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 52/136 (38%), Gaps = 1/136 (0%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL-GSWLEKHDC 81
+ +L E +V V F ++ ++ + + + E D
Sbjct: 210 KCPNTPMTDAVDGTGCTLYEDKEVTVSLLVTFPNNASAVSTQYLDDIEKVSAFLKEYPDT 269
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
L+EGH +G + L +RA AV VA GI+ R+ G+E + +
Sbjct: 270 TVLLEGHTSAVGKATYNKWLSKKRADAVAKQLVADGIAEDRITTVGLGEERLKNDANTKA 329
Query: 142 AYAKNRRAIVFLKGCR 157
A A+NRR +K +
Sbjct: 330 ANAENRRVEAHIKTIK 345
>gi|33594231|ref|NP_881875.1| putative peptidoglycan-associated lipoprotein [Bordetella pertussis
Tohama I]
gi|33598303|ref|NP_885946.1| putative peptidoglycan-associated lipoprotein [Bordetella
parapertussis 12822]
gi|33603213|ref|NP_890773.1| putative peptidoglycan-associated lipoprotein [Bordetella
bronchiseptica RB50]
gi|33564306|emb|CAE43607.1| putative peptidoglycan-associated lipoprotein [Bordetella pertussis
Tohama I]
gi|33566861|emb|CAE39076.1| putative peptidoglycan-associated lipoprotein [Bordetella
parapertussis]
gi|33568844|emb|CAE34602.1| putative peptidoglycan-associated lipoprotein [Bordetella
bronchiseptica RB50]
gi|332383645|gb|AEE68492.1| putative peptidoglycan-associated lipoprotein [Bordetella pertussis
CS]
Length = 165
Score = 64.4 bits (155), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 1/105 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
SV+FD SY++ ++ + + IEG+ DE G ++ALG RRA
Sbjct: 58 QRSVYFDFDSYTVSEQYRGLVETHARYLASNNQQRIKIEGNTDERGGAEYNLALGQRRAD 117
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
AV G+S ++++ S+GKE P G E +A+NRRA +
Sbjct: 118 AVRRMMTLLGVSDNQIETISFGKEKPKATGSSEADFAENRRADIV 162
>gi|325915597|ref|ZP_08177905.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Xanthomonas vesicatoria ATCC 35937]
gi|325538157|gb|EGD09845.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Xanthomonas vesicatoria ATCC 35937]
Length = 439
Score = 64.4 bits (155), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 46/123 (37%), Gaps = 7/123 (5%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRN 96
+ ++ D + FD IRP ++VL L + + + GH D G
Sbjct: 317 PGTPCGYLITLNDRILFDFDKSDIRPDAVRVLDTLAAALGKVTTQQMEVRGHTDAKGDDA 376
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG-----HDEDAYAKNRRAIV 151
+ AL RRA+AV RG + YG+ P + NRR +
Sbjct: 377 YNQALSERRAHAVLAALRTRGAAQGA-GAKGYGESQPVAPNTVNGQDNPGGRQLNRRVEI 435
Query: 152 FLK 154
FL+
Sbjct: 436 FLR 438
>gi|111219587|ref|YP_710381.1| lipoprotein [Frankia alni ACN14a]
gi|111147119|emb|CAJ58764.1| hypothetical protein; putative lipoprotein [Frankia alni ACN14a]
Length = 168
Score = 64.4 bits (155), Expect = 4e-09, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 39/111 (35%), Gaps = 6/111 (5%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
+ V F S + + ++++ L ++G+ D G+ ++ L RRA
Sbjct: 54 LSADVLFAFDSAELTATARRQIADVAGRLAGSAAPIRVDGYTDSFGTPAYNVILSQRRAS 113
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYG------HDEDAYAKNRRAIVF 152
AV + + + +G P + D A NRR +
Sbjct: 114 AVADLLRPAAPAGFLVSARGHGSADPIAHDTLPDGSDDPAGRAINRRVTIT 164
>gi|332297510|ref|YP_004439432.1| OmpA/MotB domain protein [Treponema brennaborense DSM 12168]
gi|332180613|gb|AEE16301.1| OmpA/MotB domain protein [Treponema brennaborense DSM 12168]
Length = 469
Score = 64.4 bits (155), Expect = 4e-09, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 49/127 (38%), Gaps = 5/127 (3%)
Query: 32 DTVLNESSLQEQFSSSVG-DSVFFDTSSYSIRPADIQVLSNLGSWLE----KHDCDFLIE 86
+ V + + + + ++ F S + PA+ L + L+ ++ ++E
Sbjct: 319 NKVPDVTITDDYTGIQISIQNLQFIADSAELLPAEKLRLDTIAELLKTVTADNEFSVIVE 378
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
GH +G L + RA A+ + RG+ +G +P + A+N
Sbjct: 379 GHTASVGKPAGEQQLSIERAQAIISAMAQRGVDTGTFTSKGFGGTVPVGDNATPEGRAQN 438
Query: 147 RRAIVFL 153
RR + +
Sbjct: 439 RRVEILI 445
>gi|322515688|ref|ZP_08068661.1| outer membrane protein P5 [Actinobacillus ureae ATCC 25976]
gi|322118233|gb|EFX90525.1| outer membrane protein P5 [Actinobacillus ureae ATCC 25976]
Length = 360
Score = 64.4 bits (155), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/155 (21%), Positives = 59/155 (38%), Gaps = 12/155 (7%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
IS + + + E + + V F +++PA Q L + + +
Sbjct: 205 ISSVSAGLSYRFGQGAAPVAAPAIETKNFAFSSDVLFAFGKSNLKPAAAQALDAMQAEIN 264
Query: 78 KH---DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
+ + G+ D +G S++ L RRA V NY V++G SA+ + YG+ P
Sbjct: 265 NAGLANAAIQVNGYTDRIGKEASNLKLSQRRAETVANYIVSKGASAANVTAVGYGEANPV 324
Query: 135 --VYGHDEDAY-------AKNRRAIVFLKGCRANT 160
A +RR V ++G + T
Sbjct: 325 TGATCDAVKGRKALIACLAPDRRVEVQVQGSKEVT 359
>gi|218461533|ref|ZP_03501624.1| probable outer membrane lipoprotein [Rhizobium etli Kim 5]
Length = 175
Score = 64.4 bits (155), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 54/137 (39%), Gaps = 1/137 (0%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LE 77
+ T +P + +E F +VG ++F S ++ + L + W +
Sbjct: 33 AAPMTGQTNDPAPGFENVAAGSEEDFILNVGRRIYFKQDSAALDSVAMATLDSQADWLNK 92
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
++G AD+ GS + L +RA A Y ++G+ RM YG +
Sbjct: 93 NPTWLLKLQGFADDSGSTSKMQTLSQKRAEAAMAYLASKGVDPKRMWAKGYGNDREVRDC 152
Query: 138 HDEDAYAKNRRAIVFLK 154
D +NRR + L+
Sbjct: 153 TDRSCKVQNRRVVTNLR 169
>gi|145641242|ref|ZP_01796822.1| Outer membrane protein P5 [Haemophilus influenzae R3021]
gi|145274079|gb|EDK13945.1| Outer membrane protein P5 [Haemophilus influenzae 22.4-21]
Length = 358
Score = 64.4 bits (155), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 53/138 (38%), Gaps = 10/138 (7%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG-SWLEKHDCDFLIEGH 88
+ + + S+ V F +++P L ++ + + G+
Sbjct: 221 QGAAPVVAAPEVVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGEMSQVKSAKVAVAGY 280
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY--- 143
D +GS ++ L RA +V NYFVA+G++A + T YGK P
Sbjct: 281 TDRIGSDAFNVKLSQERADSVANYFVAKGVAADAISATGYGKANPVTGATCDQVKGRKAL 340
Query: 144 ----AKNRRAIVFLKGCR 157
A +RR + + G +
Sbjct: 341 IACLAPDRRVEIAVNGTK 358
>gi|260642406|ref|ZP_05415772.2| lipoprotein PG3 [Bacteroides finegoldii DSM 17565]
gi|260622249|gb|EEX45120.1| lipoprotein PG3 [Bacteroides finegoldii DSM 17565]
Length = 260
Score = 64.4 bits (155), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 54/143 (37%), Gaps = 11/143 (7%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW--LE 77
+ + +++ + + + F T + S+ PA LS + +
Sbjct: 101 AAAEAKQIEGAQVEQITDNNGLKAVKVTFDSGILFTTGNASLSPAAKSALSKFANNVLNQ 160
Query: 78 KHDCDFLIEGHADEL--------GSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSY 128
D D I G+ D SR ++ L RA +V +Y + G+S++++K V
Sbjct: 161 NRDMDVSIYGYTDNQGWRNSTAEQSRQKNLNLSQERAQSVASYLLNCGVSSNQIKGVQGM 220
Query: 129 GKEMPSVYGHDEDAYAKNRRAIV 151
G+ P +NRR V
Sbjct: 221 GESDPVASNDTAAGREQNRRVEV 243
>gi|225012121|ref|ZP_03702558.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A]
gi|225003676|gb|EEG41649.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A]
Length = 298
Score = 64.4 bits (155), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 46/130 (35%), Gaps = 7/130 (5%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
L + S+ + + F + S+++ + L LG+ E D +IEGH D
Sbjct: 157 GKGLTVEQRNGKVYISMENKLLFKSGSWNVGSQGQEALGQLGTVLAENPDIVVVIEGHTD 216
Query: 91 ELGSRNS-----SIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVYGHDEDAYA 144
+ + L +RA AV + + + +P ++ A
Sbjct: 217 NVPFSPKEALESNWDLSTKRATAVVKILLNNESVLPQNLTAAGRSEYVPIAPNNNATGRA 276
Query: 145 KNRRAIVFLK 154
NRR + L
Sbjct: 277 VNRRIEIILS 286
>gi|91216090|ref|ZP_01253058.1| putative flagellar motor protein MotB [Psychroflexus torquis ATCC
700755]
gi|91185607|gb|EAS71982.1| putative flagellar motor protein MotB [Psychroflexus torquis ATCC
700755]
Length = 319
Score = 64.4 bits (155), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 46/115 (40%), Gaps = 7/115 (6%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR-----NSSI 99
S+ + + F + S+++ + + LG + D LIEGH D + +
Sbjct: 192 VSMENKLLFASGSWTVGGEGQKAVKELGKVLADNPDIAVLIEGHTDNVPYGGNGPLTDNW 251
Query: 100 ALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L +RA V + I+ + G+ P V E+ AKNRR V L
Sbjct: 252 DLSTKRATEVLKLLLKNGKINPQNLTAAGKGEFAPLVPNTTEEGKAKNRRIEVVL 306
>gi|33595602|ref|NP_883245.1| hypothetical protein BPP0920 [Bordetella parapertussis 12822]
gi|33600116|ref|NP_887676.1| hypothetical protein BB1130 [Bordetella bronchiseptica RB50]
gi|33565680|emb|CAE40328.1| probable outer membrane protein [Bordetella parapertussis]
gi|33567714|emb|CAE31628.1| probable outer membrane protein [Bordetella bronchiseptica RB50]
Length = 215
Score = 64.4 bits (155), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 50/131 (38%), Gaps = 10/131 (7%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS----NLGSWLEKHDCDFLIE 86
+ + +V F +S ++P ++L+ L ++L HD ++
Sbjct: 70 AAPLAAGRVTLVDGRIGISGNVLFALNSDQLQPEGREILASLVAPLSAYLRAHDEILMVS 129
Query: 87 GHADELGSRN------SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
G D+ + L +RA V + GI A+ + ++G E P DE
Sbjct: 130 GFTDDQQVHQGNRRYADNWELSAQRALTVTRALIDAGIPAASVFAAAFGAEQPVASNADE 189
Query: 141 DAYAKNRRAIV 151
A+NRR +
Sbjct: 190 TGRAQNRRVEI 200
>gi|326798978|ref|YP_004316797.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
gi|326549742|gb|ADZ78127.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
Length = 269
Score = 64.4 bits (155), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 41/116 (35%), Gaps = 7/116 (6%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELG-----SRNSSI 99
+ D + F + S I Q L+ L L + +EGH D +
Sbjct: 143 VLLADKLLFSSGSIIIDQRGKQALAELAKVLNTQPEINMAVEGHTDNQKVRSLGQIKDNW 202
Query: 100 ALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L + R+ +V Y I R+ T G+ P +A + NRR + L
Sbjct: 203 DLSVLRSTSVVRYLTEEEGIDPKRLIATGKGEFTPVDTADTPEARSANRRIEIVLS 258
>gi|254251106|ref|ZP_04944424.1| Outer membrane protein [Burkholderia dolosa AUO158]
gi|124893715|gb|EAY67595.1| Outer membrane protein [Burkholderia dolosa AUO158]
Length = 557
Score = 64.4 bits (155), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Query: 66 IQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMK 124
++ L L+ D LIEGHAD GS +++ L RA A+ ++ V G R+
Sbjct: 462 RELAHVLRLILQNPDHRVLIEGHADSEGSPDANFRLSEARARAIRDWLVVEGGLPITRIA 521
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
+ G P E A NRR V L A+
Sbjct: 522 IQGMGDLRPIGDNATEAGRALNRRVDVSLIPDAAD 556
>gi|319427914|gb|ADV55988.1| OmpA/MotB domain protein [Shewanella putrefaciens 200]
Length = 202
Score = 64.4 bits (155), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 56/188 (29%), Gaps = 30/188 (15%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDS----------- 51
T+ + LS I + S D ++ + + + S +
Sbjct: 1 MKTVILFLSIILLAGCSMRDTVNIEEMTTTQAYDLSDKDRDGVVEARERCNDTMLGASTD 60
Query: 52 -----------------VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELG 93
+ F S I P + ++ ++ + IEGH G
Sbjct: 61 NYGCGRIKAINERKEINILFPNDSAFIAPEYYSQIEDIAAFLRQYPTTKVTIEGHTSRTG 120
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ + L RA AV R R+ YG P V +A +NRR +
Sbjct: 121 TDERNAVLSQERADAVTAALADRFNIERSRLTAIGYGSSRPIVLEQTPEAEMRNRRVVAE 180
Query: 153 LKGCRANT 160
+ G T
Sbjct: 181 VTGDDTTT 188
>gi|325281257|ref|YP_004253799.1| OmpA/MotB domain-containing protein [Odoribacter splanchnicus DSM
20712]
gi|324313066|gb|ADY33619.1| OmpA/MotB domain protein [Odoribacter splanchnicus DSM 20712]
Length = 276
Score = 64.4 bits (155), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 47/127 (37%), Gaps = 6/127 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
L + + ++ D + F++ S + + L L ++HD D IEGH D
Sbjct: 137 SDELTVTEKNGKIYVAMSDKLLFESGSAQVNKQGKEALGKLAEVLKKQHDIDVFIEGHTD 196
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ L + RA +V G++ ++ G+ MP + A
Sbjct: 197 NKPIKTVQFKDNWDLSVVRATSVVRILTKDYGVNPLQILPCGRGEFMPVDNNESVEGRAH 256
Query: 146 NRRAIVF 152
NRR +
Sbjct: 257 NRRTEII 263
>gi|294678506|ref|YP_003579121.1| OmpA/MotB domain-containing protein [Rhodobacter capsulatus SB
1003]
gi|294477326|gb|ADE86714.1| OmpA/MotB domain protein [Rhodobacter capsulatus SB 1003]
Length = 422
Score = 64.4 bits (155), Expect = 4e-09, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 43/120 (35%), Gaps = 14/120 (11%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIEGHADELG-----S 94
V F S + P +S + + + ++G D+
Sbjct: 300 FSSEVLFQPGSADLSPEGQAQISRVAETFRELAAEIPPEIDWLLEVDGFTDDTPLSGQGE 359
Query: 95 RNSSIALGLRRAYAVFNYFV-ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA +V Y + A+G + R+ +G+ P G +A A+NRR + L
Sbjct: 360 FKDNWELSQARALSVVKYLIEAQGFAPKRLAAAGFGEFRPVAAGKSPEARAQNRRIELKL 419
>gi|209965120|ref|YP_002298035.1| hypothetical protein RC1_1826 [Rhodospirillum centenum SW]
gi|209958586|gb|ACI99222.1| chemotaxis MotB protein, putative [Rhodospirillum centenum SW]
Length = 344
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 48/118 (40%), Gaps = 12/118 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIEGHADELGS----R 95
V F + S + A + LS L L++ ++GH D +
Sbjct: 224 FQSEVLFGSGSVELGEAGKERLSRLAETLKEIAARVPPEVDWVLRVDGHTDSVPIRSARF 283
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA AV Y + +GI A R+ +G+ P G +A A+NRR + L
Sbjct: 284 PSNWELSTARATAVVKYLIDQGIPADRLAAAGFGQYQPLDPGTSAEALARNRRIEIKL 341
>gi|103485733|ref|YP_615294.1| OmpA/MotB [Sphingopyxis alaskensis RB2256]
gi|98975810|gb|ABF51961.1| OmpA/MotB [Sphingopyxis alaskensis RB2256]
Length = 170
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 46/116 (39%), Gaps = 1/116 (0%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNS 97
+ S+ + + F T+ ++ + + + + +EGH D GS
Sbjct: 48 ETALGWELSMPERLLFPTNESAVPAEQQERMRAIAMRLVSVGITTARVEGHTDSTGSSAY 107
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L RA AV A G++ + ++ G+ +P + NRR +V +
Sbjct: 108 NLTLSRARAEAVAAPMRAGGMTFTADQIVGRGETLPLSGNDTAEGRQDNRRVVVIV 163
>gi|295395643|ref|ZP_06805835.1| OmpA family protein [Brevibacterium mcbrellneri ATCC 49030]
gi|294971459|gb|EFG47342.1| OmpA family protein [Brevibacterium mcbrellneri ATCC 49030]
Length = 563
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 41/118 (34%), Gaps = 9/118 (7%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNSSIALGLR 104
++ V FD I +VL N+ L + + GH D G N + L
Sbjct: 269 NITADVLFDFDKSEINDKGHKVLGNVAKTLNQQAAGQTVKVVGHTDAKGDENYNKKLSED 328
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD------EDAYAKNRRAIVFLKGC 156
RA AV + + +++ G+ P D E AKNRR K
Sbjct: 329 RAKAVQKELQPQLNN-VKLETEGRGETQPIAKNFDDKGNDLEANQAKNRRVSFEFKPT 385
>gi|124007750|ref|ZP_01692453.1| OmpA family protein [Microscilla marina ATCC 23134]
gi|123986872|gb|EAY26644.1| OmpA family protein [Microscilla marina ATCC 23134]
Length = 274
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 2/103 (1%)
Query: 54 FDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F S + +L ++ +E + + + GH +G++ ++ L +RA AV Y
Sbjct: 168 FKLGSDELDEKSKALLDSVAQKMMEFPEAEIEVSGHTCNIGTKAGNLRLSKKRAEAVRKY 227
Query: 113 FVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ I R+K Y P V +E KNRR +K
Sbjct: 228 LMEYDGIDPKRIKTAGYADNRPLVPNINEPNRKKNRRVAFKMK 270
>gi|114706609|ref|ZP_01439510.1| flagellar motor protein [Fulvimarina pelagi HTCC2506]
gi|114538001|gb|EAU41124.1| flagellar motor protein [Fulvimarina pelagi HTCC2506]
Length = 344
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 46/119 (38%), Gaps = 13/119 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEK--------HDCDFLIEGHADELG-----S 94
V F + S ++ A L + S + + ++GH D +
Sbjct: 223 FQSEVLFPSGSADLQTAGTDELDQMASAIRDLAREIPSDINWIVRVDGHTDNVPLSGTGQ 282
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ + L + RA +V Y +++G+ A + T +G+ P G + +NRR L
Sbjct: 283 FDDNWELSVARASSVVKYLISQGVQAEHLAATGFGEFQPIEEGSTPEVRRRNRRIEFKL 341
>gi|312891928|ref|ZP_07751431.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
gi|311295559|gb|EFQ72725.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
Length = 571
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 6/138 (4%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DF 83
I++P V+ E V ++++D IRP L L L++H
Sbjct: 432 PDTIAAPPAVIVNVPRPEPKPDFVIRTIYYDLDKSFIRPDAAAELDKLSVVLKEHPALKI 491
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD---- 139
+ AD S + ++AL RRA A NY V +G+S SR+ YGK D
Sbjct: 492 ELSSFADSRASYSYNLALSRRRATAAVNYLVNKGVSISRVLANGYGKTHLVNQCADHVKC 551
Query: 140 -EDAYAKNRRAIVFLKGC 156
E + NRR L G
Sbjct: 552 SEAEHQLNRRTEFKLIGN 569
>gi|120600520|ref|YP_965094.1| OmpA/MotB domain-containing protein [Shewanella sp. W3-18-1]
gi|146294678|ref|YP_001185102.1| OmpA/MotB domain-containing protein [Shewanella putrefaciens CN-32]
gi|120560613|gb|ABM26540.1| OmpA/MotB domain protein [Shewanella sp. W3-18-1]
gi|145566368|gb|ABP77303.1| OmpA/MotB domain protein [Shewanella putrefaciens CN-32]
Length = 202
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/188 (18%), Positives = 57/188 (30%), Gaps = 30/188 (15%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDS----------- 51
T+ + LS I + S D ++ + + + S +
Sbjct: 1 MKTVILFLSIILLAGCSMRDTVNIEEMTTTQAYDLSDKDRDGVVEARERCNDTMLGASTD 60
Query: 52 -----------------VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELG 93
+ F S I P + ++ ++ + IEGH G
Sbjct: 61 NYGCGRIKAINERKEINILFPNDSAFIAPEYYSQIEDIAAFLRQYPTTKVTIEGHTSRTG 120
Query: 94 SRNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ + L RA AV R SR+ YG P V +A +NRR +
Sbjct: 121 TDERNAVLSQERADAVTAALADRFNIDRSRLTAIGYGSSRPIVLEQTPEAEMRNRRVVAE 180
Query: 153 LKGCRANT 160
+ G T
Sbjct: 181 VTGDDTTT 188
>gi|326794456|ref|YP_004312276.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
gi|326545220|gb|ADZ90440.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
Length = 422
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 56/137 (40%), Gaps = 2/137 (1%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
D+ + +L + + V + F +S ++ + VL + + +
Sbjct: 277 TSDSCPNTPAGFSVNSEGCTLYDLQTEEVQLEIRFANNSSEVKSESLPVLEEFATAINSY 336
Query: 80 DCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYG 137
D ++GH+ GS + ++ L RA +V + V + + AS + YG+ P +
Sbjct: 337 DLKNVEVQGHSSLDGSASYNLRLSEARAQSVADVLVKQFGVDASVITAKGYGETQPVINE 396
Query: 138 HDEDAYAKNRRAIVFLK 154
+A NRR + ++
Sbjct: 397 ISNEANTVNRRVVAVIQ 413
>gi|167949850|ref|ZP_02536924.1| sodium-type flagellar protein [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 285
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 2/116 (1%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNSS 98
++ F+ V F + + + + +L L +L + + IEGHAD+ G R +
Sbjct: 169 EKGFADYRYSEVRFAFNLHDLDASAKALLKELADYLNRDERVKSVRIEGHADDQGRRKYN 228
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ L RRA AV Y V +G+ +R+ YG+ P V + A AKNRR + L
Sbjct: 229 LKLSERRAMAVKAYLVEQGVEQARLATFHYGESRPKVRSRSQKARAKNRRVAILLS 284
>gi|330446461|ref|ZP_08310113.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328490652|dbj|GAA04610.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 166
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 40/160 (25%), Positives = 69/160 (43%), Gaps = 14/160 (8%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPD-----------TVLNESSLQEQFSSSVG 49
M+ S +L + + + D ++ + L ++ E +
Sbjct: 1 MKKS--LFVLCLLALFTGCSTDTYVSQENINKFDDLTVKKFLIAELKPKAIAEDKKIYLS 58
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
FD ++P DI+ L + + + D LI GH D GS + + AL LRR++A+
Sbjct: 59 LISHFDFDKAVLKPEDIKELDDFIAKIHSLSGDILIAGHTDYQGSDSYNEALSLRRSHAI 118
Query: 110 FNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRR 148
+Y AR + + +V +G++ P V GH A A NRR
Sbjct: 119 ESYLKARIDESHYQFEVKYFGEKNPIVKGHSLKANALNRR 158
>gi|313677408|ref|YP_004055404.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
gi|312944106|gb|ADR23296.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
Length = 680
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
+++++D S +IR L L + L+ + H D G + L RRA +
Sbjct: 530 ENIYYDFDSANIRADAAIELDKLVTILKDNPPIKIELSSHTDARGEAAYNQELSKRRAES 589
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSV-YGHDEDAYAKNRRAIVFL 153
Y +++GI SR+K YG+ + E+ + NRR +
Sbjct: 590 AVAYIISQGIDPSRIKARGYGESQLIIEDAQTEEEHETNRRTEFKV 635
>gi|319786952|ref|YP_004146427.1| OmpA/MotB domain protein [Pseudoxanthomonas suwonensis 11-1]
gi|317465464|gb|ADV27196.1| OmpA/MotB domain protein [Pseudoxanthomonas suwonensis 11-1]
Length = 216
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 47/116 (40%), Gaps = 10/116 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLS----NLGSWLEKHDCDFLIEGHADELGSRN----- 96
+ +V F +S ++P QVL L +LE + ++ G D+
Sbjct: 85 IGIRGNVLFALNSDQLQPEGRQVLRSLAAPLARYLEAGEQVLMVSGFTDDRPVHEGNRRF 144
Query: 97 -SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ L +RA V + G+ A + ++G + P DE+ A+NRR +
Sbjct: 145 ADNWELSAQRALTVTRALIEEGVPADSVFAAAFGAQQPVSPNDDEEGRARNRRVEI 200
>gi|13473358|ref|NP_104925.1| hypothetical protein mlr3926 [Mesorhizobium loti MAFF303099]
gi|14024107|dbj|BAB50711.1| mlr3926 [Mesorhizobium loti MAFF303099]
Length = 343
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 43/118 (36%), Gaps = 5/118 (4%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG-----SR 95
Q + G V D ++ ++ + + ++GH D
Sbjct: 223 QSEVLFPTGSEVINDAGKVEMKKLADAIIELQKEIPPEINWVLRVDGHTDNKPLSGTGRF 282
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L R+ +V + + G+ A+R+ +G+ P ++A KNRR + L
Sbjct: 283 RDNWELSTARSTSVVKFLIENGVPANRLVAAGFGEFQPLDPADTDEARNKNRRIELKL 340
>gi|327404493|ref|YP_004345331.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
16823]
gi|327320001|gb|AEA44493.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
Length = 279
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/101 (25%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
++FD IRP L+ + + H D + G+ D GS + L RRA A+
Sbjct: 176 IYFDYDKSDIRPEFESFLNRIVYVINSHTDLRVKVTGNTDADGSDQYNDGLSERRAEAII 235
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+FV G+ R+ + G++ P + ++ NRR
Sbjct: 236 AFFVKAGLKRDRIVIDFKGEKNPVSDNNSDEGKQLNRRVDF 276
>gi|237706550|ref|ZP_04537031.1| OmpA family membrane protein [Escherichia sp. 3_2_53FAA]
gi|226899590|gb|EEH85849.1| OmpA family membrane protein [Escherichia sp. 3_2_53FAA]
Length = 146
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Query: 68 VLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY-FVARGISASRMKVT 126
++ L + K L+ G+ D G S+ L LRRA AV N+ I A+ V
Sbjct: 49 LVDALVNIRAKPGWLILVAGYTDATGDEKSNQQLSLRRAEAVRNWMLQTSDIPATCFAVQ 108
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G+ P+ A NRR + L
Sbjct: 109 GLGESQPAATNDTPQGRAVNRRVEISL 135
>gi|89073143|ref|ZP_01159682.1| flagellar motor protein [Photobacterium sp. SKA34]
gi|89051096|gb|EAR56553.1| flagellar motor protein [Photobacterium sp. SKA34]
Length = 307
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 52/131 (39%), Gaps = 6/131 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHA-- 89
D ++ +L +Q + + F S ++P ++ + ++ + GH
Sbjct: 163 DKIIEIENLGQQLVIRIREKGSFPEGSAFLQPKFKPLVRQVAMLVKDVPGIIRVTGHTAS 222
Query: 90 DELGS--RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
D+L S S+ L +RA +V G ++M+V P +D AKN
Sbjct: 223 DKLDSELYRSNWDLSAQRAVSVAQEMEKVEGFDHTKMRVIGLADTQPIADNKTQDGKAKN 282
Query: 147 RRAIV-FLKGC 156
RR + ++G
Sbjct: 283 RRVEISIIQGK 293
>gi|86142769|ref|ZP_01061208.1| OmpA family protein [Leeuwenhoekiella blandensis MED217]
gi|85830801|gb|EAQ49259.1| OmpA family protein [Leeuwenhoekiella blandensis MED217]
Length = 622
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 60/133 (45%), Gaps = 6/133 (4%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFL 84
+ + + ++ + + + + ++FD +IRP L + + + +
Sbjct: 489 SAYADTEDIVAVNDRNQLTQVKL-EKIYFDFDKANIRPDAATTLDKLVALMKKYPEMNVE 547
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH----DE 140
+ H D+ G + ++ L RRA + +Y V++GI SR+K YG++ P E
Sbjct: 548 VASHTDQRGPEDYNLQLSQRRAQSTVDYIVSKGIDRSRLKAQGYGEQDPINACPSGDCTE 607
Query: 141 DAYAKNRRAIVFL 153
+ + +NRR+ +
Sbjct: 608 EQFDENRRSEFTI 620
>gi|90410854|ref|ZP_01218869.1| Putative sodium-type flagellar protein MotY [Photobacterium
profundum 3TCK]
gi|90328485|gb|EAS44783.1| Putative sodium-type flagellar protein MotY [Photobacterium
profundum 3TCK]
Length = 296
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYAV 109
+ +D S + + L+ + ++ D L+ ++D G + +L RRA +
Sbjct: 188 LHYDMDSDELNKPSQRRLAQITDFVRYSDDIDLVLLATYSDSTGGTKVNQSLSERRAKKL 247
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
YF++ G+ +R++V +YGK P KNRR ++ L
Sbjct: 248 EEYFMSLGLPKNRIQVEAYGKRRPIADNDTPIGRNKNRRVVISL 291
>gi|33151318|ref|NP_872671.1| major outer membrane protein [Haemophilus ducreyi 35000HP]
gi|1872470|gb|AAB49273.1| major outer membrane protein [Haemophilus ducreyi]
gi|33147538|gb|AAP95060.1| major outer membrane protein [Haemophilus ducreyi 35000HP]
Length = 403
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 50/126 (39%), Gaps = 12/126 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD + ++ QVL + + + G+ D +GS + ++ L
Sbjct: 277 AFSSDVLFDFAKADLKQEAAQVLDATNTEIVNLGLATPAIQVNGYTDRIGSGDVNLKLSQ 336
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE---------DAYAKNRRAIVFLK 154
RRA V NY VA+G + + YG+ P + A +RR V ++
Sbjct: 337 RRAETVANYLVAKGQNPVSINAVGYGEANPITGNTCDAVKGRKQLIACLAPDRRVEVQIQ 396
Query: 155 GCRANT 160
G + T
Sbjct: 397 GTKEVT 402
>gi|585614|sp|P38368|OMP52_HAEIN RecName: Full=Outer membrane protein P5; Short=OMP P5; Flags:
Precursor
gi|388301|gb|AAA03346.1| outer membrane protein P5 [Haemophilus influenzae]
gi|301169904|emb|CBW29508.1| outer membrane protein A (3a;II*;G;d) [Haemophilus influenzae
10810]
Length = 353
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 53/138 (38%), Gaps = 10/138 (7%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG-SWLEKHDCDFLIEGH 88
+ + + S+ V F +++P L ++ + + G+
Sbjct: 216 QGAAPVVAAPEVVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGEMSQVKSAKVAVAGY 275
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY--- 143
D +GS ++ L RA +V NYFVA+G++A + T YGK P
Sbjct: 276 TDRIGSDAFNVKLSQERADSVANYFVAKGVAADAISATGYGKANPVTGATCDQVKGRKAL 335
Query: 144 ----AKNRRAIVFLKGCR 157
A +RR + + G +
Sbjct: 336 IACLAPDRRVEIAVNGTK 353
>gi|119776394|ref|YP_929134.1| OmpA/MotB [Shewanella amazonensis SB2B]
gi|119768894|gb|ABM01465.1| OmpA/MotB [Shewanella amazonensis SB2B]
Length = 201
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 2/107 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAV 109
V F S + P + L S++ + IEGH G + ++ L RRA AV
Sbjct: 76 KVLFPNDSSYLAPQYFGQIEELASFMRQFPNTKVTIEGHCSRTGGYDYNMELSQRRANAV 135
Query: 110 FNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+ I +SR+K +G P +A+ KNRR I + G
Sbjct: 136 TEVLTQQYGIESSRLKAVGFGYNSPVDPSDTPEAHDKNRRVIAEIVG 182
>gi|153833086|ref|ZP_01985753.1| outer membrane protein [Vibrio harveyi HY01]
gi|148870654|gb|EDL69561.1| outer membrane protein [Vibrio harveyi HY01]
Length = 208
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 61/138 (44%), Gaps = 1/138 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
D + + + S + V F S +I P + +S+L +L+++
Sbjct: 56 DLCPGTAEGSEIDNDGCGRYAKSSQQMQIRVLFANDSSAIDPVFVNQISDLSDFLKEYPT 115
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++G+ G+ ++AL RRA +V + GIS R+++ +G+ + G DE
Sbjct: 116 TSIELQGYTSITGTDEYNLALSKRRAESVRQELINNGISPERLRIVGFGETNLASQGTDE 175
Query: 141 DAYAKNRRAIVFLKGCRA 158
++A NRR + G +
Sbjct: 176 TSHALNRRVTATVVGYKG 193
>gi|117918835|ref|YP_868027.1| OmpA/MotB domain-containing protein [Shewanella sp. ANA-3]
gi|117611167|gb|ABK46621.1| OmpA/MotB domain protein [Shewanella sp. ANA-3]
Length = 202
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 39/188 (20%), Positives = 60/188 (31%), Gaps = 28/188 (14%)
Query: 1 MQYSTIFI---ILSAITMM------SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD- 50
M+ +F+ +L+ +M ++ D D V+ + G
Sbjct: 1 MKTVILFMSVALLAGCSMRDTVNIEEMTTTQAYDLSDKDGDGVIEARERCNDTAKGAGTD 60
Query: 51 ----------------SVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELG 93
+V F S I P + + + + IEGH G
Sbjct: 61 NYGCGQIKAINERKEINVLFPNDSAYIAPEYYPQIEEIAMFLRQYPTTKVTIEGHTSRTG 120
Query: 94 SRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ + L RA AV R I SR+ YG P V H DA +NRR +
Sbjct: 121 TDERNAVLSQERADAVTAVLADRFSIDRSRLTAIGYGSSRPLVLEHTPDAETRNRRVVAE 180
Query: 153 LKGCRANT 160
+ G T
Sbjct: 181 VTGDDTTT 188
>gi|126665323|ref|ZP_01736305.1| hypothetical protein MELB17_22060 [Marinobacter sp. ELB17]
gi|126629951|gb|EBA00567.1| hypothetical protein MELB17_22060 [Marinobacter sp. ELB17]
Length = 348
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 43/118 (36%), Gaps = 4/118 (3%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD----ELGSR 95
L + + G ++ + +L + + + I+GH D
Sbjct: 228 LPSELLFASGSALLGAEGKRELDKLAGVLLDVVETIPADLEWILRIDGHTDRIPINTPQF 287
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA AV Y + + +RM +G+ P G +A +NRR + L
Sbjct: 288 PSNWELSTARAVAVVRYLADQSVPQNRMVAAGFGEFFPVADGTTPEALQENRRIEIKL 345
>gi|94314001|ref|YP_587210.1| hypothetical protein Rmet_5082 [Cupriavidus metallidurans CH34]
gi|93357853|gb|ABF11941.1| conserved hypothetical protein [Cupriavidus metallidurans CH34]
Length = 217
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 49/131 (37%), Gaps = 10/131 (7%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH----DCDFLIE 86
+ + + +V F +S ++P +L +L + L + D ++
Sbjct: 70 AGPLAAGRVTLKDGRIGISGNVLFALNSDQLQPEGRALLKSLAAPLSAYLGARDEILMVS 129
Query: 87 GHADELGSRNSSIAL------GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
G D+ R + +RA V + G+ + + ++G + P E
Sbjct: 130 GFTDDQQVREGNRRFADNLELSAQRALTVTRALIEAGLPPASIFSAAFGSQQPVASNATE 189
Query: 141 DAYAKNRRAIV 151
++ AKNRR +
Sbjct: 190 ESRAKNRRVEI 200
>gi|123442919|ref|YP_001006894.1| hypothetical protein YE2703 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122089880|emb|CAL12736.1| putative membrane protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 556
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 30/78 (38%), Gaps = 1/78 (1%)
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSV 135
+ LI GH+D GS + ++ + +RA V ++ + A + G P
Sbjct: 469 QHQGRKVLIIGHSDNTGSASFNMTISEQRAVVVRDWLIKNSALAKEDFIIRGMGALEPVA 528
Query: 136 YGHDEDAYAKNRRAIVFL 153
+NRR V L
Sbjct: 529 SNDTPAGQDQNRRVEVLL 546
>gi|223938134|ref|ZP_03630031.1| peptidoglycan-associated lipoprotein [bacterium Ellin514]
gi|223893178|gb|EEF59642.1| peptidoglycan-associated lipoprotein [bacterium Ellin514]
Length = 214
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 39/112 (34%), Positives = 63/112 (56%), Gaps = 1/112 (0%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIAL 101
++ G +V+FD +SIR +D LS + ++L+ H +EG+ DE G+ + +L
Sbjct: 98 DRAALAGATVYFDFDKFSIRSSDQSKLSEVANYLKSHPGTAVRVEGNCDERGTEEYNRSL 157
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G RRA A G+ + ++ S+G++ P+V GHDE AYAKNRR +
Sbjct: 158 GERRALAAREALATMGVDPTLVETVSFGEDKPAVPGHDESAYAKNRRDEFVV 209
>gi|226069484|dbj|BAH36952.1| OmpA-like outer membrane protein [Pasteurella pneumotropica]
Length = 347
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 50/121 (41%), Gaps = 10/121 (8%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLG-SWLEKHDCDFLIEGHADELGSRNSSIALGLRR 105
++ V F +++P L + + + + G+ D +G +++ L RR
Sbjct: 227 NLNSDVTFAFGKANLKPQAQATLDGIYGEIAQVSNAKVAVAGYTDRIGKDAANLKLSQRR 286
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLKGC 156
A +V NY VA+G++A + T YG+ P A +RR + + G
Sbjct: 287 ADSVANYLVAKGVAAQDITATGYGEANPVTGATCDAVKGRKALIACLAPDRRVEIAVNGT 346
Query: 157 R 157
+
Sbjct: 347 K 347
>gi|89891334|ref|ZP_01202840.1| chemotaxis motB protein, OmpA family [Flavobacteria bacterium
BBFL7]
gi|89516365|gb|EAS19026.1| chemotaxis motB protein, OmpA family [Flavobacteria bacterium
BBFL7]
Length = 289
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 6/114 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELG----SRNSSIA 100
S+ D + F + S I VL +G+ L+ + + +IEGH D + +
Sbjct: 151 ISINDKLLFASGSDQINSNAYTVLGKVGTILKDKANMEVMIEGHTDSQPIASANFKDNWD 210
Query: 101 LGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA A+ Y + I +RM +P + AKNRR + +
Sbjct: 211 LSTARAAAITRYLQEKEQIDPARMTAAGRSYYVPIASNDTAEGRAKNRRTRIII 264
>gi|145631210|ref|ZP_01786983.1| Outer membrane protein P5 [Haemophilus influenzae R3021]
gi|144983137|gb|EDJ90632.1| Outer membrane protein P5 [Haemophilus influenzae R3021]
Length = 314
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 53/138 (38%), Gaps = 10/138 (7%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG-SWLEKHDCDFLIEGH 88
+ + + S+ V F +++P L ++ + + G+
Sbjct: 177 QGAAPVVAAPEVVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGEMSQVKSAKVAVAGY 236
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY--- 143
D +GS ++ L RA +V NYFVA+G++A + T YGK P
Sbjct: 237 TDRIGSDAFNVKLSQERADSVANYFVAKGVAADAISATGYGKANPVTGATCDQVKGRKAL 296
Query: 144 ----AKNRRAIVFLKGCR 157
A +RR + + G +
Sbjct: 297 IACLAPDRRVEIAVNGTK 314
>gi|229846196|ref|ZP_04466308.1| Outer membrane protein P5 [Haemophilus influenzae 7P49H1]
gi|229811200|gb|EEP46917.1| Outer membrane protein P5 [Haemophilus influenzae 7P49H1]
Length = 359
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 53/138 (38%), Gaps = 10/138 (7%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG-SWLEKHDCDFLIEGH 88
+ + + S+ V F +++P L ++ + + G+
Sbjct: 222 QGAAPVVAAPEVVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGEMSQVKSAKVAVAGY 281
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY--- 143
D +GS ++ L RA +V NYFVA+G++A + T YGK P
Sbjct: 282 TDRIGSDAFNVKLSQERADSVANYFVAKGVAADAISATGYGKANPVTGATCDQVKGRKAL 341
Query: 144 ----AKNRRAIVFLKGCR 157
A +RR + + G +
Sbjct: 342 IACLAPDRRVEIAVNGTK 359
>gi|159042678|ref|YP_001531472.1| OmpA/MotB domain-containing protein [Dinoroseobacter shibae DFL 12]
gi|157910438|gb|ABV91871.1| OmpA/MotB domain protein [Dinoroseobacter shibae DFL 12]
Length = 310
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 54/128 (42%), Gaps = 2/128 (1%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIE 86
S D + L V + + F T + ++ L+ L + E D +
Sbjct: 180 ARSGDIARPLADLLLSQGRVVLEDLRFATGNATLENGQYPSLTALAGFLTENPDLVIALV 239
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
GH D GS ++++AL +RRA AV + VA G+++ R++ G P E+
Sbjct: 240 GHTDAEGSIDANLALSMRRAEAVRDRLVADYGVASERLRAEGVGYLAPRATNRTEEGRRA 299
Query: 146 NRRAIVFL 153
NRR L
Sbjct: 300 NRRVEAVL 307
>gi|117621479|ref|YP_855927.1| ompA family protein [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
gi|117562886|gb|ABK39834.1| ompA family protein [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
Length = 308
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 4/118 (3%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNS--- 97
+ + + F + S + VL+ L S L++ D + G+ D N
Sbjct: 139 DNWLTVELSSGLLFGSGSAFMSTNADPVLNTLSSILKQVDNYVRVRGYTDNQQINNEIFR 198
Query: 98 -SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ L RA AV +A+GI+ R+ +YG+ P E +NR+ +V +
Sbjct: 199 SNWTLSAARAEAVLTALIAKGIAPQRLAYEAYGEFSPFTDNSTEQGRLQNRKVVVAIS 256
>gi|218510720|ref|ZP_03508598.1| probable outer membrane lipoprotein [Rhizobium etli Brasil 5]
gi|218517107|ref|ZP_03513947.1| probable outer membrane lipoprotein [Rhizobium etli 8C-3]
Length = 178
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 56/150 (37%), Gaps = 8/150 (5%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESS-------LQEQFSSSVGDSVFFDTSSYSIRPAD 65
+ I+ ++ + T +E F +VG ++F S ++
Sbjct: 23 CSTTEIAALEEPTAAPMTGQTNDPAPGFENVAAGSEEDFILNVGRRIYFKQDSATLDSVA 82
Query: 66 IQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+ L N +W ++G AD+ GS + L +RA A Y ++G+ RM
Sbjct: 83 MATLDNQAAWLNRNPTWLLKLQGFADDSGSASKMQTLSQKRADAAMAYLASKGVDPKRMW 142
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
YG + D +NRR + L+
Sbjct: 143 AKGYGNDREVRDCTDRSCKVQNRRVVTNLR 172
>gi|218708117|ref|YP_002415738.1| putative outer membrane protein [Vibrio splendidus LGP32]
gi|218321136|emb|CAV17086.1| putative outer membrane protein, ompA/motB [Vibrio splendidus
LGP32]
Length = 213
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/111 (26%), Positives = 52/111 (46%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSI 99
++ + + V V FD + +L L + LE +F++ G+ D GS + ++
Sbjct: 100 VEGKLAREVLARVTFDFDDDELNQKSRYLLLKLIAKLEHQTPEFIVTGNTDSKGSDSYNL 159
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
+LGL+R+ AV Y +G++ + V+S G+ P E NRR
Sbjct: 160 SLGLQRSNAVVGYLKEQGVNIEDLTVSSQGEANPVQSNETESGRHNNRRVD 210
>gi|254474819|ref|ZP_05088205.1| flagellar motor protein [Ruegeria sp. R11]
gi|214029062|gb|EEB69897.1| flagellar motor protein [Ruegeria sp. R11]
Length = 655
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 40/119 (33%), Gaps = 14/119 (11%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSW--------LEKHDCDFLIEGHADE-----LGS 94
V F S + P ++ + + + ++GH D+
Sbjct: 533 FASEVLFAPGSADLSPEGRAEIAKVARILQTVAAAIPQGINWIIRVDGHTDDTPLGAHPK 592
Query: 95 RNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ L RA +V Y A GI R+ +G+ P +A A+NRR +
Sbjct: 593 FADNWELSQGRALSVVRYMVQALGIPPERLSANGFGEYQPVNPAETPEARAQNRRIELK 651
>gi|114049133|ref|YP_739683.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-7]
gi|113890575|gb|ABI44626.1| OmpA/MotB domain protein [Shewanella sp. MR-7]
Length = 185
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 42/112 (37%), Gaps = 2/112 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
+V F S I P + + + + IEGH G+ + L RA AV
Sbjct: 60 NVLFPNDSAYIAPEYYPQIEEIAMFLRQYPTTKVTIEGHTSRTGTDERNAVLSQERADAV 119
Query: 110 FNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
R I SR+ YG P V H DA +NRR + + G T
Sbjct: 120 TAVLADRFSIDRSRLTAIGYGSSRPLVLEHTPDAETRNRRVVAEVTGDDTTT 171
>gi|291276590|ref|YP_003516362.1| putative flagellar motor protein [Helicobacter mustelae 12198]
gi|290963784|emb|CBG39619.1| putative flagellar motor protein [Helicobacter mustelae 12198]
Length = 258
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 49/124 (39%), Gaps = 8/124 (6%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSI-RPADIQVLSNLGSWLEKH--DCDFLIEGHADE--- 91
++ + + + FD S + L N+ + ++K ++G+ D
Sbjct: 116 EQIEHGITLQLPSDLLFDNGSAELANDEMKDYLRNMANVIKKFPPQVSINVKGYTDNAPL 175
Query: 92 --LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
+ L RA AV N + +G++ ++ TSYGK P + AKN R
Sbjct: 176 PPNSPYKNHYLLAAARAMAVMNVLIQQGVNQKQLSFTSYGKNSPIAPNNTPANRAKNNRV 235
Query: 150 IVFL 153
++L
Sbjct: 236 EIYL 239
>gi|42521052|ref|NP_966967.1| peptidoglycan-associated lipoprotein, putative [Wolbachia
endosymbiont of Drosophila melanogaster]
gi|99034094|ref|ZP_01314208.1| hypothetical protein Wendoof_01001001 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
gi|42410793|gb|AAS14901.1| peptidoglycan-associated lipoprotein, putative [Wolbachia
endosymbiont of Drosophila melanogaster]
Length = 159
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 38/160 (23%), Positives = 64/160 (40%), Gaps = 16/160 (10%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD-SVFFDTS-SYSIRPAD 65
+++ + ++G+ + K ++ +N +GD VFF S +
Sbjct: 5 LVIMCCFCLLLTGVSSCPKKGANTTNKINS------VVKQIGDKRVFFGYDESSIAEVSA 58
Query: 66 IQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR-GISASRMK 124
+L + + D + GH D GS ++ALG RRA A + V+ +R+K
Sbjct: 59 DALLDVMEVLQDNPDAKVTLTGHTDNRGSHEYNLALGARRADAAKKFMVSCTPYIENRIK 118
Query: 125 VTSYGKEMPSVYGHD-------EDAYAKNRRAIVFLKGCR 157
S G+ P V D E +AKNRR G +
Sbjct: 119 TASKGETEPLVNVKDDSRNSKYEKEHAKNRRVEFSFSGIK 158
>gi|260767963|ref|ZP_05876897.1| putative sodium-type flagellar protein MotY precursor [Vibrio
furnissii CIP 102972]
gi|260615993|gb|EEX41178.1| putative sodium-type flagellar protein MotY precursor [Vibrio
furnissii CIP 102972]
Length = 227
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSW--LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
++F + S+ A + L +L S+ +K LI+GH D +GSR +++++ RA V
Sbjct: 103 LYFASGQQSLSAAQQRTLRDLISYVARDKRVTHLLIDGHTDNVGSRLANLSVSRSRAEQV 162
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G++A ++++ ++G P E A+NRR ++ L
Sbjct: 163 AAVLETLGVAADKIQIRAHGSRYPVASNATESGRAQNRRVVIRL 206
>gi|254719715|ref|ZP_05181526.1| hypothetical protein Bru83_09258 [Brucella sp. 83/13]
gi|265984730|ref|ZP_06097465.1| OmpA/MotB domain-containing protein [Brucella sp. 83/13]
gi|306837825|ref|ZP_07470687.1| Hypothetical protein BROD_0631 [Brucella sp. NF 2653]
gi|306841432|ref|ZP_07474134.1| Hypothetical protein BIBO2_1217 [Brucella sp. BO2]
gi|264663322|gb|EEZ33583.1| OmpA/MotB domain-containing protein [Brucella sp. 83/13]
gi|306288538|gb|EFM59890.1| Hypothetical protein BIBO2_1217 [Brucella sp. BO2]
gi|306407064|gb|EFM63281.1| Hypothetical protein BROD_0631 [Brucella sp. NF 2653]
Length = 343
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 13/119 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIEGHADELG-----S 94
V F T S I P + L + + + + ++GH D +
Sbjct: 222 FQSEVLFPTGSAEINPKGQVEMKKLADAIIQLNREIPDDINWVLRVDGHTDNVPLAGTGR 281
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA AV + +A G+ A+R+ +G+ P DA A+NRR + L
Sbjct: 282 FRDNWELSSARATAVVKFLIANGVPANRLVAAGFGEYQPLDTADTADARARNRRIELKL 340
>gi|262364585|gb|ACY61142.1| OmpA domain protein [Yersinia pestis D182038]
Length = 987
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 36/121 (29%), Gaps = 10/121 (8%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPAD--IQVLSNLGSWLEKHDCDFLIEGHADELG----S 94
+ F T ++ + + LG L D + GH D S
Sbjct: 836 PRGWLLIFTSDGAFRTGEATLSEEFINKKNIERLGLALAPWPGDIEVIGHTDNKPFRSTS 895
Query: 95 RNSSIALGLRRAYAVFNYFVA----RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
N+++ L RA V + + G+ P E+ +NRR
Sbjct: 896 GNNNLKLSAARASVVADKLRESTQINETHQREISAIGRGESDPLADNATEEGRKRNRRVD 955
Query: 151 V 151
+
Sbjct: 956 I 956
>gi|319776591|ref|YP_004139079.1| outer membrane protein p5 precursor (omp p5) [Haemophilus
influenzae F3047]
gi|317451182|emb|CBY87415.1| outer membrane protein p5 precursor (omp p5) [Haemophilus
influenzae F3047]
Length = 348
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 55/138 (39%), Gaps = 10/138 (7%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGH 88
+ + + S+ V F +++P L ++ + + + G+
Sbjct: 211 QGAAPVVAAPEMVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGQMSQVKSAKVAVAGY 270
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY--- 143
D +GS ++ L +RA +V NYFVA+G++A + T YGK P
Sbjct: 271 TDRIGSDEFNVKLSQKRADSVANYFVAKGVAADAISATGYGKANPVTGATCDQVKGRKAL 330
Query: 144 ----AKNRRAIVFLKGCR 157
A +RR + + G +
Sbjct: 331 IACLAPDRRVEIAVNGTK 348
>gi|290473839|ref|YP_003466713.1| outer membrane protein 3a (II*;G;d) [Xenorhabdus bovienii SS-2004]
gi|289173146|emb|CBJ79919.1| outer membrane protein 3a (II*;G;d) [Xenorhabdus bovienii SS-2004]
Length = 373
Score = 64.4 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 66/148 (44%), Gaps = 12/148 (8%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEK 78
D + + + E S ++ V F+ + +++ Q L NL + ++
Sbjct: 216 DVAPVVVPVAPVIPTPAPTVENKSFTLRSDVLFNFNKSTLKTEGKQELDNLYTQLAKIDP 275
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VY 136
+ L+ GH D +GS+ ++ L +RA +V +Y VA+GI A+ ++ GKE
Sbjct: 276 NQGRVLVIGHTDRIGSQQYNLPLSQKRAESVVDYLVAKGIPAASIQAEGRGKEGSVTGST 335
Query: 137 GHDEDAYAK-------NRRAIVFLKGCR 157
+ AK +RR ++ ++G +
Sbjct: 336 CDNIKGRAKLIDCLAPDRRVVINIQGTK 363
>gi|148559624|ref|YP_001259565.1| hypothetical protein BOV_1656 [Brucella ovis ATCC 25840]
gi|148370881|gb|ABQ60860.1| OmpA/MotB domain [Brucella ovis ATCC 25840]
Length = 314
Score = 64.1 bits (154), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 47/119 (39%), Gaps = 13/119 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIEGHADELG-----S 94
V F T S I P + L + + + + ++GH D +
Sbjct: 193 FQSEVLFPTGSAEINPKGQVEMKKLADAIIQLNREIPDDINWVLRVDGHTDNVPLAGTGR 252
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA AV + +A G+ A+R+ +G+ P + DA A+NRR + L
Sbjct: 253 FRDNWELSSARATAVVKFLIANGVPANRLVAAGFGEYQPLDTANTADARARNRRIELKL 311
>gi|83310388|ref|YP_420652.1| hypothetical protein amb1289 [Magnetospirillum magneticum AMB-1]
gi|82945229|dbj|BAE50093.1| Flagellar motor protein [Magnetospirillum magneticum AMB-1]
Length = 333
Score = 64.1 bits (154), Expect = 5e-09, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 44/122 (36%), Gaps = 12/122 (9%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS--------WLEKHDCDFLIEGHADELG 93
E + F T S + + + L + + + ++GH D+
Sbjct: 207 EGDRFVFQSELLFATGSAELGTEGAEQVRKLAATIREINAGMPKGLNWVLRVDGHTDKRP 266
Query: 94 S----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
S+ L RA V A G+ R+ +G+ P G+ E AYAKNRR
Sbjct: 267 ITSGKFPSNWELSTARAITVLRALAADGVPRDRLAAAGFGEFQPVDSGNTEAAYAKNRRI 326
Query: 150 IV 151
+
Sbjct: 327 EI 328
>gi|304414298|ref|ZP_07395666.1| outer membrane protein A [Candidatus Regiella insecticola LSR1]
gi|304283512|gb|EFL91908.1| outer membrane protein A [Candidatus Regiella insecticola LSR1]
Length = 389
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 58/129 (44%), Gaps = 12/129 (9%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDCDFLIEGHADELGSRNS 97
E ++ V FD + +++P + L +L S + + L+ G+ D +G
Sbjct: 255 AEPERFTLNADVLFDFNKSALKPEGLTQLDDLYSQLSSINPKNGSVLVLGYTDRMGKEAY 314
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDE-------DAYAKNRR 148
+ AL RRA +V +Y + +GI A ++ G+ P D+ + A +RR
Sbjct: 315 NQALSQRRAQSVMDYLITKGIPADKISARGMGEANPVTGSTCGDDMKRAAKIECLAPDRR 374
Query: 149 AIVFLKGCR 157
++ +KG +
Sbjct: 375 VVIEVKGEK 383
>gi|300716419|ref|YP_003741222.1| type IV / VI secretion system family protein, DotU [Erwinia
billingiae Eb661]
gi|299062255|emb|CAX59372.1| Type IV / VI secretion system family protein, DotU [Erwinia
billingiae Eb661]
Length = 408
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 17/128 (13%), Positives = 42/128 (32%), Gaps = 5/128 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
D L+ + + F+ + PA ++ + + ++ + + D
Sbjct: 265 VDRTLDVADGANGSKVIIAADKLFNRGGSDLTPAGRAIMVRVAAAMDNIKGTLQVSVYTD 324
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAK 145
S+ L +A+ + + I ++ G P + ++ A+
Sbjct: 325 NQPQRTARFPSNYEYSLAQAHTLTSLLQQLMIQPGHMIRGEGRGDSNPLLPNDSQENRAQ 384
Query: 146 NRRAIVFL 153
NRR + L
Sbjct: 385 NRRVEILL 392
>gi|322421507|ref|YP_004200730.1| OmpA/MotB domain-containing protein [Geobacter sp. M18]
gi|320127894|gb|ADW15454.1| OmpA/MotB domain protein [Geobacter sp. M18]
Length = 1714
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 44/143 (30%), Gaps = 9/143 (6%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-K 78
+ D + + E ++ +++ + F T I +++L + + +
Sbjct: 80 SVFAQDQGDRTEKRQVAEKEVKTVKVANLVPPIRFRTGDAEITREYLELLRGVLEKMRGR 139
Query: 79 HDCDFLIEGHADELGSRNSSIAL-------GLRRAYAVFNYFV-ARGISASRMKVTSYGK 130
++ GHAD RA Y A G+ + G
Sbjct: 140 NNVRLHFVGHADTQQLHGPLQEKFGDNTGLSRERAGTTAEYCQRALGLPPEAISYEGMGD 199
Query: 131 EMPSVYGHDEDAYAKNRRAIVFL 153
P E+ A NRR V +
Sbjct: 200 GKPVASNSTEEGRALNRRVEVEV 222
Score = 42.9 bits (99), Expect = 0.013, Method: Composition-based stats.
Identities = 10/42 (23%), Positives = 13/42 (30%), Gaps = 3/42 (7%)
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
AV + A +S + G P A NRR
Sbjct: 343 AVQDGLKASDVS---FQSDGLGGGNPVASNDTPQGRALNRRV 381
>gi|146306467|ref|YP_001186932.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp]
gi|145574668|gb|ABP84200.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp]
Length = 217
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 36/178 (20%), Positives = 66/178 (37%), Gaps = 25/178 (14%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISS--PDTVLNESSLQEQ------------FSS 46
M+ +TIF + + +G + + ++ P + + L E F
Sbjct: 1 MRANTIFAFTCCLLIAGCAGSEKKEVAKAAVMPPPQVTRAWLDEYEPKLREAVKGSHFEF 60
Query: 47 SVGDSVFFDT----SSYSIRPADIQVLSNLGSWLE-------KHDCDFLIEGHADELGSR 95
+++ T S++ + + +LG D ++ GHAD G
Sbjct: 61 ERRENLLVVTAPVQGSFNPDRPHMLLPVSLGPITRVAKLLESDEDMAVVVLGHADSSGDA 120
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L +RA AV + F G+ +R++V G +MP A NRR + L
Sbjct: 121 TRNRELSDQRARAVTSIFRLSGLKQNRLQVMGLGSDMPRAANDSAAGRALNRRVEILL 178
>gi|31747683|gb|AAO38325.1| Lfe140p2 [Leptospirillum ferrooxidans]
Length = 94
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 20/85 (23%), Positives = 31/85 (36%)
Query: 74 SWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
+ +IEG+A GS + L RRA +V + GI+ RM++ G P
Sbjct: 4 FMRNAPKRNVIIEGYAYNTGSGEYNDTLSRRRAESVREVLLNDGINPERMRIRGLGSRYP 63
Query: 134 SVYGHDEDAYAKNRRAIVFLKGCRA 158
NRR + +
Sbjct: 64 VATDKTSAGRQANRRVEIIVSDKNG 88
>gi|332161206|ref|YP_004297783.1| hypothetical protein YE105_C1584 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325665436|gb|ADZ42080.1| hypothetical protein YE105_C1584 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 558
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 30/78 (38%), Gaps = 1/78 (1%)
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSV 135
+ LI GH+D GS + ++ + +RA V ++ + A + G P
Sbjct: 471 QHQGRKVLIIGHSDNTGSASFNMTISEQRAVVVRDWLIKNSALAKEDFIIRGMGALEPVA 530
Query: 136 YGHDEDAYAKNRRAIVFL 153
+NRR V L
Sbjct: 531 SNDTPAGQDQNRRVEVLL 548
>gi|318605099|emb|CBY26597.1| putative OMPA family outer membrane porin precursor [Yersinia
enterocolitica subsp. palearctica Y11]
Length = 556
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 30/78 (38%), Gaps = 1/78 (1%)
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSV 135
+ LI GH+D GS + ++ + +RA V ++ + A + G P
Sbjct: 469 QHQGRKVLIIGHSDNTGSASFNMTISEQRAVVVRDWLIKNSALAKEDFIIRGMGALEPVA 528
Query: 136 YGHDEDAYAKNRRAIVFL 153
+NRR V L
Sbjct: 529 SNDTPAGQDQNRRVEVLL 546
>gi|126664984|ref|ZP_01735967.1| flagellar motor protein MotD [Marinobacter sp. ELB17]
gi|126630354|gb|EBA00969.1| flagellar motor protein MotD [Marinobacter sp. ELB17]
Length = 261
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 45/133 (33%), Gaps = 4/133 (3%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+ ++G + V++ ++ E ++ +S+ F + V+ +
Sbjct: 107 ALQELAGQLGQEFSALIEGGVISLNADDEWLQLNLPNSLLFGSGDAEPHYDSFAVMEKIA 166
Query: 74 SWLEKHDCDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
L D IEG D S+ L RA + V GI +R+ YG
Sbjct: 167 GVLRDTDNAIRIEGFTDNQSIRSGRFPSNWELSAARASVLVRMLVMDGIDPARLAAVGYG 226
Query: 130 KEMPSVYGHDEDA 142
+ P ++
Sbjct: 227 EHQPVARNDTDEG 239
>gi|89889605|ref|ZP_01201116.1| insulin-like peptidase, M16 family [Flavobacteria bacterium BBFL7]
gi|89517878|gb|EAS20534.1| insulin-like peptidase, M16 family [Flavobacteria bacterium BBFL7]
Length = 573
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 50 DSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
+ ++FD +I + + L + ++ + L E + D GS + + L +RA A
Sbjct: 462 NRIYFDNDKAAITTSAAKELDRIVAMMMKNSSMEILAETYTDTRGSDSYNKTLSQKRADA 521
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGH----DEDAYAKNRRAIVFL 153
V Y +++GI+A+R+K G++ P V ++ Y ++RR +
Sbjct: 522 VRGYLISKGIAANRVKAVGRGEDNPVVDCESKTCTDEEYEQSRRTEFTI 570
>gi|77462842|ref|YP_352346.1| hypothetical protein RSP_2289 [Rhodobacter sphaeroides 2.4.1]
gi|77387260|gb|ABA78445.1| Outer membrane protein, OmpA/MotB family [Rhodobacter sphaeroides
2.4.1]
Length = 525
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 45/120 (37%), Gaps = 14/120 (11%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGS--------WLEKHDCDFLIEGHADE-----LGS 94
V F+ S + P +S + E D ++GH D G+
Sbjct: 403 FSSEVLFEPGSAELAPEGRAQISGVVQTLNEIRTQIPEGIDWIIRVDGHTDNVPLSGFGA 462
Query: 95 RNSSIALGLRRAYAVFNYFV-ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA +V + + G SR+ T +G+ P G DA A+NRR + L
Sbjct: 463 FRDNWELSSARALSVVRFMQQSLGFPPSRLAATGFGEYRPVTPGDSPDARAQNRRIELKL 522
>gi|159043677|ref|YP_001532471.1| OmpA/MotB domain-containing protein [Dinoroseobacter shibae DFL 12]
gi|157911437|gb|ABV92870.1| OmpA/MotB domain protein [Dinoroseobacter shibae DFL 12]
Length = 212
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 37/170 (21%), Positives = 68/170 (40%), Gaps = 18/170 (10%)
Query: 2 QYSTIFIILSAITMMSIS--------------GIDNLDTKISSPDTVLNESSLQEQFSSS 47
+ S+ FI L+ + G ++ + + SL ++F+
Sbjct: 3 RTSSAFIALTLTAALGACAYSEIGSEVDEGGFGDATMNNTLVQTGELSASISLAQRFARE 62
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRA 106
V +V F + ++ L ++++ F + GH D +GS + LG RA
Sbjct: 63 VPSTVNFAFNQSTLTSEARAALDVQADFIKQFPELRFSVFGHTDLVGSAAYNRRLGQARA 122
Query: 107 YAVFNYFVARGISASRMKV-TSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
V NY V+RG+ +++ S G+ P V D + NRR + + G
Sbjct: 123 TTVVNYLVSRGVQPEQLQALVSLGETQPLVVTQDREMR--NRRTVTEVSG 170
>gi|325287332|ref|YP_004263122.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
gi|324322786|gb|ADY30251.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
Length = 647
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 59/141 (41%), Gaps = 7/141 (4%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVG-DSVFFDTSSYSIRPADIQVLSNLGSWL-E 77
+ ++ + +S+ S+ + S++FDT+S +R L + +++ E
Sbjct: 504 NENKIEEVVLELSNSKEATSVGSDLSNYLKLKSIYFDTNSSYLRVESYPDLDKVANYMLE 563
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+ H D S ++ L RRA + Y V++G+ ASR+ +G+
Sbjct: 564 NPTVVIEVGAHTDSTESDTYNLWLSNRRAKSTVKYLVSKGVDASRITGIGFGESQLLNKC 623
Query: 138 HD-----EDAYAKNRRAIVFL 153
+ + +A NRR+ +
Sbjct: 624 KNGVKCSNEEHAVNRRSEFII 644
>gi|190571199|ref|YP_001975557.1| peptidoglycan-associated lipoprotein, putative [Wolbachia
endosymbiont of Culex quinquefasciatus Pel]
gi|213018599|ref|ZP_03334407.1| peptidoglycan-associated lipoprotein, putative [Wolbachia
endosymbiont of Culex quinquefasciatus JHB]
gi|190357471|emb|CAQ54905.1| peptidoglycan-associated lipoprotein, putative [Wolbachia
endosymbiont of Culex quinquefasciatus Pel]
gi|212995550|gb|EEB56190.1| peptidoglycan-associated lipoprotein, putative [Wolbachia
endosymbiont of Culex quinquefasciatus JHB]
Length = 159
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 63/160 (39%), Gaps = 16/160 (10%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD-SVFFDTS-SYSIRPAD 65
+I+ + ++G+ + K +N ++ +GD VFF S +
Sbjct: 5 LIIMCCFCLLLTGVSSCPKKG------VNTTNKMNAVVKQIGDKRVFFGYDESSISEVSA 58
Query: 66 IQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMK 124
+L + D + GH D GS ++ALG RRA A + V+ +R+K
Sbjct: 59 DALLDVMEVLQNNPDAKVTLTGHTDNRGSHEYNLALGARRADAAKKFMVSCTPYLENRIK 118
Query: 125 VTSYGKEMPSVYGHD-------EDAYAKNRRAIVFLKGCR 157
S G+ P V D E +AKNRR G +
Sbjct: 119 TASKGETEPLVNVKDDSRNSKYEKEHAKNRRVEFSFSGIK 158
>gi|187250865|ref|YP_001875347.1| outer membrane protein [Elusimicrobium minutum Pei191]
gi|186971025|gb|ACC98010.1| Outer membrane protein [Elusimicrobium minutum Pei191]
Length = 993
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 19/131 (14%), Positives = 50/131 (38%), Gaps = 2/131 (1%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVG-DSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCD 82
DT ++ +E ++ + + + +S + ++ + +
Sbjct: 862 DTIVAQAQEGFSEPLARKLDAIQFNSRDMEYQFNSCELTEKQKNIIREKCAALKDFPYTK 921
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
++ G+ D +GS + ++ LRRA A + G++ +++ + P +
Sbjct: 922 IIVTGNTDNIGSYGVNKSISLRRANAAAKILIEEGLNPDTIEIMGVAYDNPVTGNLTREG 981
Query: 143 YAKNRRAIVFL 153
A NRR + +
Sbjct: 982 RAMNRRTDILI 992
>gi|315635427|ref|ZP_07890693.1| conserved hypothetical protein [Arcobacter butzleri JV22]
gi|315480185|gb|EFU70852.1| conserved hypothetical protein [Arcobacter butzleri JV22]
Length = 316
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 3/98 (3%)
Query: 58 SYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
S + + E + + GH D G + + RA +V N V
Sbjct: 218 SSIPTEQSQNTIKEIAKILNENPNFKVEVAGHTDSRGEAALNKQISQDRANSVKNILVNS 277
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAK-NRRAIVFL 153
G++ +R+K YG+E P DE+ ++ NRR +
Sbjct: 278 GVNETRIKAIGYGEEFPIAK-DDENGLSEINRRVEFII 314
>gi|88800697|ref|ZP_01116256.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Reinekea sp. MED297]
gi|88776561|gb|EAR07777.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Reinekea sp. MED297]
Length = 294
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIAL 101
F +V FD + L ++ ++L+ ++GH+D +G+R + L
Sbjct: 163 FEQIRQSTVRFDGGGDGLDARARSQLDDIVTYLKADPLITAIYVDGHSDSVGTRYDNRRL 222
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RRAY V +Y V GI A+ + +G+ P A+NRR +
Sbjct: 223 SERRAYRVTDYLVNAGIDAAMILTRYHGERYPIASNETAAGRAQNRRVTL 272
>gi|148554094|ref|YP_001261676.1| OmpA/MotB domain-containing protein [Sphingomonas wittichii RW1]
gi|148499284|gb|ABQ67538.1| OmpA/MotB domain protein [Sphingomonas wittichii RW1]
Length = 295
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 55/143 (38%), Gaps = 3/143 (2%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+ + + ++ +++ ++++ +V FDT + D L + S E
Sbjct: 149 ATDQRFEEQTAATESLRGALGDIDKYNIKSTTNVHFDTGKTELSAEDKAHLCSTASTAEA 208
Query: 79 HDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS--RMKVTSYGKEMPSV 135
+ + + G+ D GS + + L +RA V NY + T K P+
Sbjct: 209 TENALMLVVGYTDSTGSDDFNQELSEKRANRVINYLQQACGWKPYRMLTPTGMAKADPAA 268
Query: 136 YGHDEDAYAKNRRAIVFLKGCRA 158
+ A+NRR V + ++
Sbjct: 269 TNDTPEGKAQNRRVAVNILVSKS 291
>gi|32034275|ref|ZP_00134486.1| COG2885: Outer membrane protein and related
peptidoglycan-associated (lipo)proteins [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126209314|ref|YP_001054539.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus
pleuropneumoniae L20]
gi|126098106|gb|ABN74934.1| Outer membrane protein P5 precursor (OMP P5) [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
Length = 364
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/155 (20%), Positives = 57/155 (36%), Gaps = 12/155 (7%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
IS + + V + E + + V F +++PA L + + +
Sbjct: 209 ISSVSAGLSYRFGQGAVPVAAPAVETKNFAFSSDVLFAFGKSNLKPAAATALDAMQTEIN 268
Query: 78 KHDCD---FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
+ G+ D +G S++ L RRA V NY V++G A+ + YG+ P
Sbjct: 269 NAGLSNAAIQVNGYTDRIGKEASNLKLSQRRAETVANYIVSKGALAANVTAVGYGEANPV 328
Query: 135 --VYGHDEDAY-------AKNRRAIVFLKGCRANT 160
A +RR V ++G + T
Sbjct: 329 TGATCDKVKGRKALIACLAPDRRVEVQVQGTKEVT 363
>gi|262066274|ref|ZP_06025886.1| fibronectin-binding protein [Fusobacterium periodonticum ATCC
33693]
gi|291380021|gb|EFE87539.1| fibronectin-binding protein [Fusobacterium periodonticum ATCC
33693]
Length = 75
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDED 141
+EGH D +GS +I L RRA AV + G++ R+ + + G+E P +
Sbjct: 1 VTLEGHTDSIGSNQYNIGLSRRRAEAVKAKLIEFGLAEERIVGIEAKGEEYPVATNETPE 60
Query: 142 AYAKNRRAIVFL 153
+NRR L
Sbjct: 61 GRLQNRRVEFRL 72
>gi|116332026|ref|YP_801744.1| endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116125715|gb|ABJ76986.1| Endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 224
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 45/120 (37%), Gaps = 4/120 (3%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK-HDCDFLIEGHADELGSR- 95
+ + + + F S + A I + + + L F IEGH D+ +
Sbjct: 87 KIIDGRMVVVLSSDILFPVGSAFLSSAGIASIREVTTLLASLGGKRFQIEGHTDDTPTGI 146
Query: 96 --NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L RA V + + G+ R+ S G P++ + + NRR + +
Sbjct: 147 KGYTNWELASSRALNVLHTMIKAGMPEERISAASMGASRPALPNTSPENRSANRRIEIVI 206
>gi|148368|gb|AAA24807.1| outer membrane protein II [Enterobacter aerogenes]
Length = 238
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 12/121 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L L + L + D ++ G D +GS + L
Sbjct: 117 TLKSDVLFNFNKATLKPEGQQALDQLYTQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSE 176
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
+RA +V +Y V++GI A+++ G+ P + A +RR + +K
Sbjct: 177 KRAQSVVDYLVSKGIPANKISPRGMGESNPVTGSTCDNVKPRAALIDCLAPDRRVEIEVK 236
Query: 155 G 155
G
Sbjct: 237 G 237
>gi|218778894|ref|YP_002430212.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01]
gi|218760278|gb|ACL02744.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01]
Length = 215
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 50/122 (40%), Gaps = 2/122 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADE 91
+ + ++ + FD +S + PA L + S IEGHA
Sbjct: 90 PGTPKGAPVDENGCWSIPVIQFDLNSMELNPAARSALDAVSSVLHVNKAVKLSIEGHACS 149
Query: 92 LGSRN-SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + L L+RA AV +Y ++RG+ +RM VT YG P + +NRR
Sbjct: 150 AGDNAAYNNYLSLQRAQAVKDYLISRGVDGARMSVTGYGANQPVKDNNSRAHRIQNRRVE 209
Query: 151 VF 152
+
Sbjct: 210 IV 211
>gi|145635014|ref|ZP_01790720.1| outer membrane protein P5 [Haemophilus influenzae PittAA]
gi|145267622|gb|EDK07620.1| outer membrane protein P5 [Haemophilus influenzae PittAA]
Length = 355
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 53/138 (38%), Gaps = 10/138 (7%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG-SWLEKHDCDFLIEGH 88
+ + + S+ V F +++P L ++ + + G+
Sbjct: 218 QGAAPVVAAPEMVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGEMSQVKSAKVAVAGY 277
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY--- 143
D +GS ++ L RA +V NYFVA+G++A + T YGK P
Sbjct: 278 TDRIGSDAFNVKLSQERADSVANYFVAKGVAADAISATGYGKANPVTGATCDQVKGRKAL 337
Query: 144 ----AKNRRAIVFLKGCR 157
A +RR + + G +
Sbjct: 338 IACLAPDRRVEIAVNGTK 355
>gi|260596996|ref|YP_003209567.1| hypothetical protein CTU_12040 [Cronobacter turicensis z3032]
gi|260216173|emb|CBA29013.1| hypothetical protein CTU_12040 [Cronobacter turicensis z3032]
Length = 465
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 38/102 (37%), Gaps = 2/102 (1%)
Query: 53 FFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
F + S +RP L L + FLI GH+D GS + L + RA AV
Sbjct: 349 LFSSGSARLRPHSPTALQPLLMLVNQHPGRRFLIIGHSDNTGSPEVNRQLSVSRAIAVRE 408
Query: 112 YFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ V + ++ +V G P E NRR
Sbjct: 409 WLVKTTRRSATQFEVYGSGASDPVASNDSEMGRELNRRVEAI 450
>gi|271963004|ref|YP_003337200.1| OmpA/MotB domain-containing protein [Streptosporangium roseum DSM
43021]
gi|270506179|gb|ACZ84457.1| OmpA/MotB domain protein [Streptosporangium roseum DSM 43021]
Length = 193
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 49/135 (36%), Gaps = 8/135 (5%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC--DF 83
++ S D +E+ E + ++ V F + L + ++
Sbjct: 55 AEVDSLDGSESETKQGETVTLALTSDVLFALDRAVLTAKAAARLRGVAGRVKTESAGGVV 114
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYG----- 137
I GH D+ G+ + L LRRA AV A + + T G+ P V
Sbjct: 115 KIVGHTDDQGTDAYNDRLSLRRAQAVQEGLRALLSGQSVTFEATGLGERQPKVPNVVDGR 174
Query: 138 HDEDAYAKNRRAIVF 152
E+ A+NRR +
Sbjct: 175 PVEENRARNRRVEIV 189
>gi|163854962|ref|YP_001629260.1| peptidoglycan-associated lipoprotein [Bordetella petrii DSM 12804]
gi|163258690|emb|CAP40989.1| peptidoglycan-associated lipoprotein [Bordetella petrii]
Length = 167
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
SV+FD SY++ ++ + I+G+ DE G ++ALG RRA
Sbjct: 60 QRSVYFDFDSYTVPDQYRGLVETHARYLASHQQQRVQIQGNTDERGGAEYNLALGQRRAD 119
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
AV G+S ++++ S+GKE P G E +A+NRRA +
Sbjct: 120 AVRRMMTLLGVSDAQIETISFGKEKPRATGTTEADFAENRRADI 163
>gi|163758837|ref|ZP_02165924.1| hypothetical protein HPDFL43_15477 [Hoeflea phototrophica DFL-43]
gi|162284127|gb|EDQ34411.1| hypothetical protein HPDFL43_15477 [Hoeflea phototrophica DFL-43]
Length = 343
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 47/119 (39%), Gaps = 13/119 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIEGHADELG-----S 94
V F + + PA + ++ L + + + ++GH D +
Sbjct: 222 FQSEVLFPSGGNELNPAGQEQMAKLAEAINELSREIPEEINWVLRVDGHTDNVPLSGTGR 281
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA +V Y + G+ A+R+ +G+ P G ++A A NRR + L
Sbjct: 282 YADNWELSTARATSVVKYLIENGVPANRLVAAGFGEFQPIADGDSDEARATNRRIELKL 340
>gi|319897366|ref|YP_004135562.1| outer membrane protein p5 precursor (omp p5) [Haemophilus
influenzae F3031]
gi|317432871|emb|CBY81237.1| outer membrane protein p5 precursor (omp p5) [Haemophilus
influenzae F3031]
Length = 348
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 55/138 (39%), Gaps = 10/138 (7%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGH 88
+ + + S+ V F +++P L ++ + + + G+
Sbjct: 211 QGAAPVVAAPEMVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGQMSQVKSAKVAVAGY 270
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY--- 143
D +GS ++ L +RA +V NYFVA+G++A + T YGK P
Sbjct: 271 TDRIGSDEFNVKLSQKRADSVANYFVAKGVAADAISATGYGKANPVTGATCDQVKGRKAL 330
Query: 144 ----AKNRRAIVFLKGCR 157
A +RR + + G +
Sbjct: 331 IACLAPDRRVEIAVNGTK 348
>gi|194435106|ref|ZP_03067342.1| OmpA family protein [Shigella dysenteriae 1012]
gi|194416637|gb|EDX32770.1| OmpA family protein [Shigella dysenteriae 1012]
gi|332089196|gb|EGI94303.1| ompA family protein [Shigella dysenteriae 155-74]
Length = 127
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 46/123 (37%), Gaps = 2/123 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF-LIEGHADE 91
+ +S + D++ F + Y + P Q + + + L ++GH D
Sbjct: 2 QSYGFTESAGDWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDN 61
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + + L L+RA V + + G + GK+ P A+NRR
Sbjct: 62 YGEDSYNEGLSLKRANVVADAWAMGGQIPRSNLTTQGLGKKYPIASNKTVQGRAENRRVA 121
Query: 151 VFL 153
V +
Sbjct: 122 VVI 124
>gi|158314079|ref|YP_001506587.1| OmpA/MotB domain-containing protein [Frankia sp. EAN1pec]
gi|158109484|gb|ABW11681.1| OmpA/MotB domain protein [Frankia sp. EAN1pec]
Length = 407
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 26/99 (26%), Positives = 38/99 (38%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYF 113
F + + L + L D ++ GH D G R + AL + RA Y
Sbjct: 305 FPVGDTVLGASTRSGLDKVARALLPGDLTVIVGGHTDSTGPRALNQALSIDRARVAREYL 364
Query: 114 VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
V RG+ A R++ +G + P A NRR V
Sbjct: 365 VMRGVPAERIRAAGFGPDQPIADNASTSGRAANRRVDVT 403
>gi|119775227|ref|YP_927967.1| OmpA/MotB [Shewanella amazonensis SB2B]
gi|119767727|gb|ABM00298.1| OmpA/MotB [Shewanella amazonensis SB2B]
Length = 289
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 37/71 (52%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
LI + D G RN + + +RA +V ++FV++GI A R++ +G+ D
Sbjct: 215 ILINAYTDSHGGRNLNQKVSDKRADSVKDFFVSKGIPADRIQTEGHGETRHVASNQGADE 274
Query: 143 YAKNRRAIVFL 153
+NRR ++ +
Sbjct: 275 RQRNRRVVIQI 285
>gi|120436663|ref|YP_862349.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
gi|117578813|emb|CAL67282.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
Length = 281
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 62/148 (41%), Gaps = 8/148 (5%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
++T+ ++ + +S D +N S+ D + FD+ Y+I+P +VL
Sbjct: 113 SVTLALVTSLKGALGDLSDEDIEINVEKGVVY--VSISDKLLFDSGRYNIKPRAKEVLGK 170
Query: 72 LGSWLEK-HDCDFLIEGHAD----ELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKV 125
+ + ++ + +F++EGH D + L ++RA +V I +RM
Sbjct: 171 VATVVKNKPNIEFMVEGHTDDQAISTSMFEDNWDLSVKRATSVVRVLQDDFGIEPARMTA 230
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+P + AKNRR + +
Sbjct: 231 AGRSYYIPVASNETAEGRAKNRRTRIVV 258
>gi|240950110|ref|ZP_04754405.1| lipoprotein Plp4/outer membrane protein and related
peptidoglycan-associated (lipo)proteins [Actinobacillus
minor NM305]
gi|240295411|gb|EER46180.1| lipoprotein Plp4/outer membrane protein and related
peptidoglycan-associated (lipo)proteins [Actinobacillus
minor NM305]
Length = 164
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 26/163 (15%), Positives = 49/163 (30%), Gaps = 12/163 (7%)
Query: 1 MQYSTIFIILSAITMMSISGI----DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDT 56
M+ + + + ++ D + V S ++ FD
Sbjct: 1 MKLVKLATVSALAALLVGCAQSNNLDAQAPAVVPSVPVKEASVTAPAKEFTLSGDFLFDF 60
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVA 115
+ L+ + +++ + G+ D LGS + L RA Y +
Sbjct: 61 DKSVLSAQGKSTLNGIAKEIKEAGAKNVTVTGYTDRLGSAAYNQKLSQARAATTKAYLQS 120
Query: 116 RGISASRMKVTSYGKEMPSVYGHDEDAYAK------NRRAIVF 152
+G+SA +K G E A NRR +
Sbjct: 121 QGVSA-NIKAVGRGAANQVKACKGETGQALKDCLKPNRRVHII 162
>gi|145637084|ref|ZP_01792747.1| Outer membrane protein P5 [Haemophilus influenzae PittHH]
gi|145269738|gb|EDK09678.1| Outer membrane protein P5 [Haemophilus influenzae PittHH]
Length = 358
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 53/138 (38%), Gaps = 10/138 (7%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG-SWLEKHDCDFLIEGH 88
+ + + S+ V F +++P L ++ + + G+
Sbjct: 221 QGAAPVVAAPEVVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGEMSQVKSAKVAVAGY 280
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY--- 143
D +GS ++ L RA +V NYFVA+G++A + T YGK P
Sbjct: 281 TDRIGSDAFNVKLSQERADSVANYFVAKGVAADAISATGYGKANPVTGATCDQVKGRKAL 340
Query: 144 ----AKNRRAIVFLKGCR 157
A +RR + + G +
Sbjct: 341 IACLAPDRRVEIAVNGTK 358
>gi|71279065|ref|YP_267707.1| ompA family protein [Colwellia psychrerythraea 34H]
gi|71144805|gb|AAZ25278.1| ompA family protein [Colwellia psychrerythraea 34H]
Length = 352
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 58/137 (42%), Gaps = 2/137 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
DN ++ + L + V +V F+ +S I+ + + L +++++
Sbjct: 208 DNCKNTPANVKVDSSGCPLFLDTAVDVDLNVAFENNSSQIKAETMNDIQRLADFMKEYKN 267
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHD 139
+IEGH+ GS ++AL +RA AV + + + R+ +G+ G+
Sbjct: 268 TSVVIEGHSSAAGSAKYNLALSQKRADAVKSLLINKFDIEESRLSAKGFGETQLISKGNT 327
Query: 140 EDAYAKNRRAIVFLKGC 156
+ NRR I ++
Sbjct: 328 AADHELNRRVIAKIEAT 344
>gi|45658882|ref|YP_002968.1| flagellar motor protein [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
gi|45602127|gb|AAS71605.1| flagellar motor protein [Leptospira interrogans serovar Copenhageni
str. Fiocruz L1-130]
Length = 223
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 45/120 (37%), Gaps = 4/120 (3%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK-HDCDFLIEGHADELGSR- 95
+ + + + F S + PA + + + L F IEGH D+ +
Sbjct: 86 KIIDGRMVVVLSSDILFPIGSAHLSPAGTAAIKEVTTLLASLEGKRFQIEGHTDDTPTGI 145
Query: 96 --NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L RA V + + G+ R+ S G P++ + + NRR + +
Sbjct: 146 KGYTNWELASSRALNVLHTMIKAGMPEVRISAASMGASRPALPNTSPENRSSNRRIEIVI 205
>gi|270261236|ref|ZP_06189509.1| outer membrane protein A, precursor [Serratia odorifera 4Rx13]
gi|270044720|gb|EFA17811.1| outer membrane protein A, precursor [Serratia odorifera 4Rx13]
Length = 359
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/159 (18%), Positives = 64/159 (40%), Gaps = 14/159 (8%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL 72
+ + +S D ++ + + E ++ V F+ + +++P Q L L
Sbjct: 193 MLSLGVSYRFGQDDVVAPVAPAPAPAPVVETKRFTLKSDVLFNFNKATLKPQGQQALDQL 252
Query: 73 GSW---LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
S ++ D ++ G+ D +GS + L +RA +V +Y V++GI + ++ G
Sbjct: 253 YSQLSSMDPKDGSVVVLGYTDAVGSDQYNQKLSEKRAQSVVDYLVSKGIPSDKISARGMG 312
Query: 130 KEMPSVYGHD--EDAY---------AKNRRAIVFLKGCR 157
+ + A +RR + +KG +
Sbjct: 313 EADSVTGNTCGYKAGRATKAQIACLAPDRRVEIEVKGIK 351
>gi|52425273|ref|YP_088410.1| OmpA protein [Mannheimia succiniciproducens MBEL55E]
gi|52307325|gb|AAU37825.1| OmpA protein [Mannheimia succiniciproducens MBEL55E]
Length = 368
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 55/138 (39%), Gaps = 10/138 (7%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGH 88
+ + ++ V F +++P L N+ + + + G+
Sbjct: 231 GQGVAAPVAEEVVSKTFTLNSDVTFAFGKATLKPEASASLDNIYGEIAQVQSPAVSVAGY 290
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE-------- 140
AD +G +++ L RRA V NY V++G++ + + T YG+ P +
Sbjct: 291 ADRIGKEAANLKLSQRRAETVANYLVSKGVAQNAITATGYGEANPVTGNTCDAVKGRKAL 350
Query: 141 -DAYAKNRRAIVFLKGCR 157
A +RR V ++G +
Sbjct: 351 IACLAPDRRVEVSVQGTK 368
>gi|126461734|ref|YP_001042848.1| hypothetical protein Rsph17029_0965 [Rhodobacter sphaeroides ATCC
17029]
gi|126103398|gb|ABN76076.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17029]
Length = 525
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 45/120 (37%), Gaps = 14/120 (11%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGS--------WLEKHDCDFLIEGHADE-----LGS 94
V F+ S + P +S + E D ++GH D G+
Sbjct: 403 FSSEVLFEPGSAELAPEGRAQISGVVQTLNEIRTQIPEGIDWIIRVDGHTDNVPLSGFGA 462
Query: 95 RNSSIALGLRRAYAVFNYFV-ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA +V + + G SR+ T +G+ P G DA A+NRR + L
Sbjct: 463 FRDNWELSSARALSVVRFMQQSLGFPPSRLAATGFGEYRPVTPGDSPDARAQNRRIELKL 522
>gi|114048539|ref|YP_739089.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-7]
gi|113889981|gb|ABI44032.1| OmpA/MotB domain protein [Shewanella sp. MR-7]
Length = 372
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 46/104 (44%), Gaps = 2/104 (1%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+ F S ++ + + L ++ + + I GHA +G + ++ L +RA AV
Sbjct: 259 IQFANDSAVVKKEYYKDIERLANYLNKNPEFTVEIAGHASNVGKPDYNMTLSDKRADAVA 318
Query: 111 NYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V + + R+ YG P V G ++A+A NRR +
Sbjct: 319 KILVEKYGISQSRVTSNGYGITKPLVAGDTKEAHAANRRIEAIV 362
>gi|23502572|ref|NP_698699.1| hypothetical protein BR1714 [Brucella suis 1330]
gi|161619642|ref|YP_001593529.1| hypothetical protein BCAN_A1752 [Brucella canis ATCC 23365]
gi|254703491|ref|ZP_05165319.1| hypothetical protein Bsuib36_06117 [Brucella suis bv. 3 str. 686]
gi|260568797|ref|ZP_05839265.1| OmpA/MotB domain-containing protein [Brucella suis bv. 4 str. 40]
gi|261754122|ref|ZP_05997831.1| OmpA/MotB domain-containing protein [Brucella suis bv. 3 str. 686]
gi|23348573|gb|AAN30614.1| OmpA family protein [Brucella suis 1330]
gi|161336453|gb|ABX62758.1| OmpA/MotB domain protein [Brucella canis ATCC 23365]
gi|260154181|gb|EEW89263.1| OmpA/MotB domain-containing protein [Brucella suis bv. 4 str. 40]
gi|261743875|gb|EEY31801.1| OmpA/MotB domain-containing protein [Brucella suis bv. 3 str. 686]
Length = 343
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 47/119 (39%), Gaps = 13/119 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIEGHADELG-----S 94
V F T S I P + L + + + + ++GH D +
Sbjct: 222 FQSEVLFPTGSAEINPKGQVEIKKLADAIIQLNREIPDDINWVLRVDGHTDNVPLAGTGR 281
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA AV + +A G+ A+R+ +G+ P + DA A+NRR + L
Sbjct: 282 FRDNWELSSARATAVVKFLIANGVPANRLVAAGFGEYQPLDTANTADARARNRRIELKL 340
>gi|313203569|ref|YP_004042226.1| ompa/motb domain protein [Paludibacter propionicigenes WB4]
gi|312442885|gb|ADQ79241.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4]
Length = 231
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 46/121 (38%), Gaps = 2/121 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADE 91
+ +++ + + + F T+ ++ A L+ + D I GH D
Sbjct: 94 DSIRDANNLKAIKVTFDSGILFQTNKSALNTASKDALTKFAKILVANPTMDITIMGHTDN 153
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + + L RA +V N+ + ++A++ ++ P A NRR
Sbjct: 154 QGSLDVNQKLSQERAQSVANFLQTQSVTATQFKEIIGKNFAEPVADNKTAAGRAANRRVE 213
Query: 151 V 151
V
Sbjct: 214 V 214
>gi|56698574|ref|YP_168951.1| OmpA domain-containing protein [Ruegeria pomeroyi DSS-3]
gi|56680311|gb|AAV96977.1| OmpA domain protein [Ruegeria pomeroyi DSS-3]
Length = 304
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 48/146 (32%), Gaps = 2/146 (1%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
++ A S++ K ++ ++ + + + + F T S ++
Sbjct: 155 LIQAFPAGSVATDPVTVEKPAAVVVPMDLAGRLQTRGRVILSGLEFATGSDALGEGPFDT 214
Query: 69 LSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVT 126
L+ L + ++ GH D +G +I L +RA AV V ++
Sbjct: 215 LAELAQLLSANAELRLVLVGHTDTVGGLEPNIELSRKRAGAVRARLVEEYGIPADQISAD 274
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVF 152
G P + NRR
Sbjct: 275 GVGYLAPIASNLTPEGREANRRVEAV 300
>gi|74095537|emb|CAJ27303.1| conserved hypothetical protein [Cronobacter sakazakii]
Length = 536
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 39/102 (38%), Gaps = 2/102 (1%)
Query: 53 FFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
F + S +RP L L + + + FLI GH+D G+ + L + RA AV
Sbjct: 420 LFSSGSARLRPHGPAALQPLFTLVNQHPENRFLIIGHSDNTGNPEVNQQLSVSRAIAVRE 479
Query: 112 YFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ V ++ + G P +E NRR
Sbjct: 480 WLVKTTKRPATQFDIYGLGASEPVAGNDNETGRELNRRVEAI 521
>gi|319426005|gb|ADV54079.1| OmpA/MotB domain protein [Shewanella putrefaciens 200]
Length = 289
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 35/72 (48%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
L++ + D G R+ + + RA +V +F++ GI R+ +G+ D D
Sbjct: 215 VLVDAYTDSYGGRSVNQRVSDNRAESVKEFFLSSGIPQDRILTVGHGERRHVASNEDIDE 274
Query: 143 YAKNRRAIVFLK 154
A+NRR ++ +
Sbjct: 275 RARNRRVVIRIS 286
>gi|145688456|gb|ABP88969.1| outer membrane protein A [Edwardsiella tarda]
Length = 351
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 12/130 (9%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDCDFLIEGHADELGSRN 96
+ E ++ V F+ + Y+++ Q L L S ++ D ++ G+ D +GS
Sbjct: 214 VVETKRFTLKSDVLFNFNKYTLKAEGRQALDQLYSQLSSMDPKDGSVVVLGYTDRIGSDQ 273
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NR 147
++ L +RA V +Y V++GI A ++ GK P + A +R
Sbjct: 274 YNLKLSKQRAQTVVDYLVSKGIPADKIAARGMGKADPVTGSTCDNVKPRAALINCLAPDR 333
Query: 148 RAIVFLKGCR 157
R ++ +KG +
Sbjct: 334 RVVIEVKGIK 343
>gi|120599225|ref|YP_963799.1| OmpA/MotB domain-containing protein [Shewanella sp. W3-18-1]
gi|120559318|gb|ABM25245.1| OmpA/MotB domain protein [Shewanella sp. W3-18-1]
Length = 289
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 35/72 (48%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
L++ + D G R+ + + RA +V +F++ GI R+ +G+ D D
Sbjct: 215 VLVDAYTDSYGGRSVNQRVSDNRAESVKEFFLSSGIPQDRILTVGHGERRHVASNEDIDE 274
Query: 143 YAKNRRAIVFLK 154
A+NRR ++ +
Sbjct: 275 RARNRRVVIRIS 286
>gi|194366042|ref|YP_002028652.1| hypothetical protein Smal_2266 [Stenotrophomonas maltophilia
R551-3]
gi|194348846|gb|ACF51969.1| OmpA/MotB domain protein [Stenotrophomonas maltophilia R551-3]
Length = 212
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 48/131 (36%), Gaps = 10/131 (7%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD----FLIE 86
+ + SV F +S ++P ++L +L + L + ++
Sbjct: 70 AGPLAAGRVTLVDGRIGISGSVLFALNSDQLQPEGQELLRSLAAPLAAYLGTREEILMVS 129
Query: 87 GHADE------LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
G D+ + L +R+ V +A G+ A + ++G E P DE
Sbjct: 130 GFTDDAPVREGNRRFADNWELSAQRSLTVTRTLIADGVPADAVFAAAFGSEQPVSSNADE 189
Query: 141 DAYAKNRRAIV 151
A+NRR +
Sbjct: 190 AGRARNRRVEI 200
>gi|332557731|ref|ZP_08412053.1| hypothetical protein RSWS8N_01730 [Rhodobacter sphaeroides WS8N]
gi|332275443|gb|EGJ20758.1| hypothetical protein RSWS8N_01730 [Rhodobacter sphaeroides WS8N]
Length = 525
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 45/120 (37%), Gaps = 14/120 (11%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGS--------WLEKHDCDFLIEGHADE-----LGS 94
V F+ S + P +S + E D ++GH D G+
Sbjct: 403 FSSEVLFEPGSAELAPEGRAQISGVVQTLNEIRTQIPEGIDWIIRVDGHTDNVPLSGFGA 462
Query: 95 RNSSIALGLRRAYAVFNYFV-ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA +V + + G SR+ T +G+ P G DA A+NRR + L
Sbjct: 463 FRDNWELSSARALSVVRFMQQSLGFPPSRLAATGFGEYRPVTPGDSPDARAQNRRIELKL 522
>gi|329755848|gb|AEC04321.1| outer membrane protein A [Pasteurella multocida]
Length = 358
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 50/121 (41%), Gaps = 10/121 (8%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLG-SWLEKHDCDFLIEGHADELGSRNSSIALGLRR 105
++ V F ++PA VL + + + G+ D LGS ++ L RR
Sbjct: 238 TLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSASVAVAGYTDRLGSDAYNLKLSQRR 297
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLKGC 156
A V NY VA+G++ + + T +G+ P A +RR + +KG
Sbjct: 298 ADTVANYLVAKGVAQNAISATGHGEANPVTGNKCDSVKGRKALIACLADDRRVEIAVKGN 357
Query: 157 R 157
+
Sbjct: 358 K 358
>gi|329755832|gb|AEC04313.1| outer membrane protein A [Pasteurella multocida]
gi|329755834|gb|AEC04314.1| outer membrane protein A [Pasteurella multocida]
gi|329755836|gb|AEC04315.1| outer membrane protein A [Pasteurella multocida]
gi|329755838|gb|AEC04316.1| outer membrane protein A [Pasteurella multocida]
gi|329755844|gb|AEC04319.1| outer membrane protein A [Pasteurella multocida]
gi|329755850|gb|AEC04322.1| outer membrane protein A [Pasteurella multocida]
Length = 358
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 50/121 (41%), Gaps = 10/121 (8%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLG-SWLEKHDCDFLIEGHADELGSRNSSIALGLRR 105
++ V F ++PA VL + + + G+ D LGS ++ L RR
Sbjct: 238 TLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSASVAVAGYTDRLGSDAYNLKLSQRR 297
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLKGC 156
A V NY VA+G++ + + T +G+ P A +RR + +KG
Sbjct: 298 ADTVANYLVAKGVAQNAISATGHGEANPVTGNKCDSVKGRKALIACLADDRRVEIAVKGN 357
Query: 157 R 157
+
Sbjct: 358 K 358
>gi|329755830|gb|AEC04312.1| outer membrane protein A [Pasteurella multocida]
Length = 358
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 50/121 (41%), Gaps = 10/121 (8%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLG-SWLEKHDCDFLIEGHADELGSRNSSIALGLRR 105
++ V F ++PA VL + + + G+ D LGS ++ L RR
Sbjct: 238 TLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSASVAVAGYTDRLGSDAYNLKLSQRR 297
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLKGC 156
A V NY VA+G++ + + T +G+ P A +RR + +KG
Sbjct: 298 ADTVANYLVAKGVAQNAISATGHGEANPVTGNKCDSVKGRKALIACLADDRRVEIAVKGN 357
Query: 157 R 157
+
Sbjct: 358 K 358
>gi|218674466|ref|ZP_03524135.1| probable outer membrane lipoprotein [Rhizobium etli GR56]
Length = 178
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 54/137 (39%), Gaps = 1/137 (0%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LE 77
+ T +P + +E F +VG ++F S ++ + L N +W
Sbjct: 36 AAPMTGQTNDPAPGFENVAAGSEEDFILNVGRRIYFKQDSATLDSVAMATLDNQAAWLNR 95
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
++G AD+ GS + L +RA A Y ++G+ RM YG +
Sbjct: 96 NPTWLLKLQGFADDSGSASQMETLSQKRADAAMAYLASKGVDPKRMWAKGYGNDREVRDC 155
Query: 138 HDEDAYAKNRRAIVFLK 154
D +NRR + L+
Sbjct: 156 TDRSCKVQNRRVVTNLR 172
>gi|146292701|ref|YP_001183125.1| OmpA/MotB domain-containing protein [Shewanella putrefaciens CN-32]
gi|145564391|gb|ABP75326.1| OmpA/MotB domain protein [Shewanella putrefaciens CN-32]
Length = 289
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 35/72 (48%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
L++ + D G R+ + + RA +V +F++ GI R+ +G+ D D
Sbjct: 215 VLVDAYTDSYGGRSVNQRVSDNRAESVKEFFLSSGIPQDRILTVGHGERRHVASNEDIDE 274
Query: 143 YAKNRRAIVFLK 154
A+NRR ++ +
Sbjct: 275 RARNRRVVIRIS 286
>gi|62548381|gb|AAX86828.1| outer membrane protein [Pasteurella multocida]
Length = 358
Score = 64.1 bits (154), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 50/121 (41%), Gaps = 10/121 (8%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLG-SWLEKHDCDFLIEGHADELGSRNSSIALGLRR 105
++ V F ++PA VL + + + G+ D LGS ++ L RR
Sbjct: 238 TLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSASVAVAGYTDRLGSDAYNLKLSQRR 297
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLKGC 156
A V NY VA+G++ + + T +G+ P A +RR + +KG
Sbjct: 298 ADTVANYLVAKGVAQNAISATGHGEANPVTGNKCDSVKGRKALIACLADDRRVEIAVKGN 357
Query: 157 R 157
+
Sbjct: 358 K 358
>gi|319795926|ref|YP_004157566.1| ompa/motb domain protein [Variovorax paradoxus EPS]
gi|315598389|gb|ADU39455.1| OmpA/MotB domain protein [Variovorax paradoxus EPS]
Length = 207
Score = 64.1 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 1/144 (0%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
A + SG +D ++ N+ + +VFF+ ++ PA Q+++
Sbjct: 64 ATAAVGASGAPVVDQADAAKVQAENKPLFDMRPPPPQRYTVFFEVGGTTLTPASQQIMTE 123
Query: 72 -LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
L + L + D ++ GH D G+ S+ L RRA V FV + A+R++ G+
Sbjct: 124 ALAAALARSGGDIVVTGHTDTKGNGESNDQLSRRRAQEVVQLFVEQRFPANRVEAVGRGE 183
Query: 131 EMPSVYGHDEDAYAKNRRAIVFLK 154
+V DE +NRR + ++
Sbjct: 184 RDLAVPTADEVDEPRNRRVTIEVR 207
>gi|116327359|ref|YP_797079.1| endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116120103|gb|ABJ78146.1| Endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
Length = 224
Score = 64.1 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 45/120 (37%), Gaps = 4/120 (3%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK-HDCDFLIEGHADELGSR- 95
+ + + + F S + A I + + + L F IEGH D+ +
Sbjct: 87 KIIDGRMVVVLSSDILFPVGSAFLSSAGIASIREVTTLLASLGGKRFQIEGHTDDTPTGI 146
Query: 96 --NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L RA V + + G+ R+ S G P++ + + NRR + +
Sbjct: 147 KGYTNWELASSRALNVLHTMIKAGMPEERISAASMGASRPALPNTSPENRSANRRIEIVI 206
>gi|114765063|ref|ZP_01444210.1| Possible outer membrane protein, OmpA family [Pelagibaca
bermudensis HTCC2601]
gi|114542610|gb|EAU45635.1| Possible outer membrane protein, OmpA family [Roseovarius sp.
HTCC2601]
Length = 452
Score = 64.1 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 24/155 (15%), Positives = 54/155 (34%), Gaps = 13/155 (8%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQ 67
++L + + + + + +S + V + + V F ++ I
Sbjct: 300 VVLELLPLFAEAAPSDTGGALSGREDVSLAVVVIQATQPEV-----FRSAKADINDVYSP 354
Query: 68 VLSNLGSWLEK---HDCDFLIEGHADELGSRNSSIALGLR-----RAYAVFNYFVARGIS 119
++ ++ + + GH D + + S+ + RA + + A+G+
Sbjct: 355 LVGSIAQVIRDNIEFIGAVRVVGHTDSIPVQTSNPFRSNQGLSEARAKTIADMLRAQGVP 414
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
A + E P D A+NRR V L+
Sbjct: 415 AELVSSEGRAAEDPIADNGTRDGRARNRRVEVILQ 449
>gi|330828822|ref|YP_004391774.1| OmpA family protein [Aeromonas veronii B565]
gi|328803958|gb|AEB49157.1| OmpA family protein [Aeromonas veronii B565]
Length = 306
Score = 64.1 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 4/121 (3%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS--- 94
+ + + + + F + S + P V++ L S L+ D + G+ D
Sbjct: 136 TQDENWLTVELSSGLLFGSGSAFLGPNAAPVINTLSSILKPVDNYVRVRGYTDNQQINNE 195
Query: 95 -RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ AL RA AV N +A GI+ R+ +YG+ P E +NR+ +V +
Sbjct: 196 IYRSNWALSAARAEAVLNGLIADGIAPQRLAFEAYGEFSPFADNGSEQGRLQNRKVVVAI 255
Query: 154 K 154
Sbjct: 256 S 256
>gi|313204438|ref|YP_004043095.1| ompa/motb domain protein [Paludibacter propionicigenes WB4]
gi|312443754|gb|ADQ80110.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4]
Length = 743
Score = 64.1 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 6/112 (5%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYA 108
D++++D + I+P +L ++ S L+ + I + D+ G+ ++ L +RA A
Sbjct: 586 DTIYYDFDKWDIQPVAYSMLDSIVSLLKSYTMMHVEIASYTDKRGTVEYNLWLSQQRANA 645
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSV-YGHDEDAYAK----NRRAIVFLKG 155
V NY V +G+ A R+K YGK V D K NRR+ + + G
Sbjct: 646 VVNYIVRQGVDAGRIKARGYGKNRLIVGDPSDISDREKIDQINRRSEIKVTG 697
>gi|312961750|ref|ZP_07776248.1| phosphate transport system substrate-binding protein [Pseudomonas
fluorescens WH6]
gi|311284009|gb|EFQ62592.1| phosphate transport system substrate-binding protein [Pseudomonas
fluorescens WH6]
Length = 443
Score = 64.1 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 54/146 (36%), Gaps = 8/146 (5%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD-SVFFDT--SSYSIRPADIQVLS 70
+++ +G + + + + + + SV F S S+ Q L
Sbjct: 299 AIVAANGFIAQQVQAMAVEPRASMPEDYQAIARDAQRLSVNFRFEEGSASLDNKARQDLR 358
Query: 71 NLGSWLEKHDC---DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
+ ++L+ HD + G D + L RA AV V G+ ++
Sbjct: 359 RVVAYLKGHDKLDKQVTLVGFGDAKNDPQRAALLSKLRAMAVRRELVKNGVVLR--EIRG 416
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFL 153
+G +MP ++ KNRR V++
Sbjct: 417 FGAQMPVAANTADEGRIKNRRVEVWV 442
>gi|237721048|ref|ZP_04551529.1| outer membrane protein [Bacteroides sp. 2_2_4]
gi|293372983|ref|ZP_06619352.1| OmpA family protein [Bacteroides ovatus SD CMC 3f]
gi|229449883|gb|EEO55674.1| outer membrane protein [Bacteroides sp. 2_2_4]
gi|292632051|gb|EFF50660.1| OmpA family protein [Bacteroides ovatus SD CMC 3f]
gi|295084441|emb|CBK65964.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Bacteroides xylanisolvens XB1A]
Length = 238
Score = 64.1 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 28/159 (17%), Positives = 58/159 (36%), Gaps = 18/159 (11%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW--LE 77
+ + +++ + + + F T + ++ A LS + +
Sbjct: 79 AAAEAKQIEGAQVEQITDNNGLQAVKVTFDSGILFTTGNANLSAAAKSALSKFANNVLNQ 138
Query: 78 KHDCDFLIEGHADEL--------GSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSY 128
D D I G+ D S+ ++ L RA +V +Y ++ G+S +++ V
Sbjct: 139 NRDMDVSIYGYTDNQGWKNSTAAQSQQKNLNLSQERAQSVSSYLLSCGVSTNQIKSVQGM 198
Query: 129 GKEMPSVYGHDEDAYAKNRRAIVF-------LKGCRANT 160
G+ P +NRR V+ +K +A T
Sbjct: 199 GESDPVASNDTAAGREQNRRVEVYMYASEQMIKDAQAAT 237
>gi|212704357|ref|ZP_03312485.1| hypothetical protein DESPIG_02412 [Desulfovibrio piger ATCC 29098]
gi|212672216|gb|EEB32699.1| hypothetical protein DESPIG_02412 [Desulfovibrio piger ATCC 29098]
Length = 331
Score = 64.1 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQ--------EQFSSSVGDSVFFDTSSYSIRPA 64
T+ +I+G++ + + D +++ ++ ++ + V V F SY++
Sbjct: 182 ATVKAIAGMNPASVLVRAEDLATSDAEVERFVLAVFCQEETVIVLRGVNFAFDSYALDSK 241
Query: 65 DIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
+ +L ++ K + ++ G D GS + L RA AV Y +G+ ASRM
Sbjct: 242 AMGILDEAAGLIKSKPNTKIVLTGWTDSRGSDAYNAKLSKNRAEAVKGYLAKQGVPASRM 301
Query: 124 KVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
GK E+ NRR +
Sbjct: 302 TAIGKGKSF-KYSNDSEEGRYMNRRTEI 328
>gi|99082187|ref|YP_614341.1| OmpA/MotB [Ruegeria sp. TM1040]
gi|99038467|gb|ABF65079.1| OmpA family protein [Ruegeria sp. TM1040]
Length = 207
Score = 64.1 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 17/168 (10%)
Query: 3 YSTIFIILSAITMMSIS-------------GIDNLDTKISSPDTVLNESSLQEQFSSSVG 49
I+ A+ + + G N + L +F++ V
Sbjct: 2 LKYAAILGLALATGACAYKEAGEPLDPKYFGSANANNTAVLSGDRSYRVQLATRFANEVP 61
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYA 108
++ FD S + +VL W+ + F + GH D +GS+ + LGLRRA A
Sbjct: 62 STINFDFDSARLDGEARRVLDTQAKWIRQFPEVRFRVYGHTDAVGSQTYNKRLGLRRARA 121
Query: 109 VFNYFVARGISASRMKVT-SYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
NY V+RGIS SR++ S+G+ P + + NRR + + G
Sbjct: 122 AVNYLVSRGISRSRLEAVASFGETQPLIVTDQRERR--NRRTVTEVSG 167
>gi|119477236|ref|ZP_01617472.1| peptidoglycan-associated lipoprotein OprL [marine gamma
proteobacterium HTCC2143]
gi|119449599|gb|EAW30837.1| peptidoglycan-associated lipoprotein OprL [marine gamma
proteobacterium HTCC2143]
Length = 175
Score = 64.1 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 38/173 (21%), Positives = 74/173 (42%), Gaps = 21/173 (12%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPD---------------------TVLNESS 39
M+ + + + A ++ ++ S D
Sbjct: 3 MKRTQLLGAILASVLLVGCASNDTVEDTSDADRIAAEQAADAEAAARSAAAAAEAEAVRV 62
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSI 99
E+ ++++ +FD ++ + L + + L ++ +EGHADE G+R ++
Sbjct: 63 AAEEAAANLQTIFYFDFDQATLSADTREALDSQIAVLNENSNKVRLEGHADERGTREYNM 122
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
AL RRA A+ NY + G++ R++ SYG+E P G E +Y++NRR +
Sbjct: 123 ALAERRANAIANYMIINGVARYRVETVSYGEERPVSAGSSESSYSENRRVELK 175
>gi|269138621|ref|YP_003295321.1| outer membrane protein A [Edwardsiella tarda EIB202]
gi|267984281|gb|ACY84110.1| outer membrane protein A [Edwardsiella tarda EIB202]
gi|304558635|gb|ADM41299.1| Outer membrane protein A precursor [Edwardsiella tarda FL6-60]
Length = 351
Score = 64.1 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 12/130 (9%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDCDFLIEGHADELGSRN 96
+ E ++ V F+ + Y+++ Q L L S ++ D ++ G+ D +GS
Sbjct: 214 VVETKRFTLKSDVLFNFNKYTLKAEGRQALDQLYSQLSSMDPKDGSVVVLGYTDRIGSDQ 273
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NR 147
++ L +RA V +Y V++GI A ++ GK P + A +R
Sbjct: 274 YNLKLSKQRAQTVVDYLVSKGIPADKIAARGMGKADPVTGSTCDNVKPRAALINCLAPDR 333
Query: 148 RAIVFLKGCR 157
R ++ +KG +
Sbjct: 334 RVVIEVKGIK 343
>gi|253720368|gb|ACT33424.1| outer membrane protein A precursor [Edwardsiella tarda]
Length = 351
Score = 64.1 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 12/130 (9%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDCDFLIEGHADELGSRN 96
+ E ++ V F+ + Y+++ Q L L S ++ D ++ G+ D +GS
Sbjct: 214 VVETKRFTLKSDVLFNFNKYTLKAEGRQALDQLYSQLSSMDPKDGSVVVLGYTDRIGSDQ 273
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NR 147
++ L +RA V +Y V++GI A ++ GK P + A +R
Sbjct: 274 YNLKLSKQRAQTVVDYLVSKGIPADKIAARGMGKADPVTGSTCDNVKPRAALINCLAPDR 333
Query: 148 RAIVFLKGCR 157
R ++ +KG +
Sbjct: 334 RVVIEVKGIK 343
>gi|254511081|ref|ZP_05123148.1| flagellar motor protein [Rhodobacteraceae bacterium KLH11]
gi|221534792|gb|EEE37780.1| flagellar motor protein [Rhodobacteraceae bacterium KLH11]
Length = 559
Score = 64.1 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 46/126 (36%), Gaps = 14/126 (11%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW--------LEKHDCDFLIEGHADELG 93
E V FDT S + + ++ + + E + ++GH D +
Sbjct: 431 EGDRFVFSSEVLFDTGSAVLSLEGREEVAKVANILRAVAAEIPEGLNWVIRVDGHTDNVP 490
Query: 94 -----SRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+ L RA +V Y A GI +R+ +G+ P DA A+NR
Sbjct: 491 LAGSGRYRDNWELSQGRALSVVRYMVDALGIPPNRLAANGFGEFQPVNPADTPDARAQNR 550
Query: 148 RAIVFL 153
R + L
Sbjct: 551 RIELKL 556
>gi|149375283|ref|ZP_01893054.1| OmpA/MotB domain protein [Marinobacter algicola DG893]
gi|149360319|gb|EDM48772.1| OmpA/MotB domain protein [Marinobacter algicola DG893]
Length = 355
Score = 64.1 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 40/101 (39%), Gaps = 4/101 (3%)
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD----ELGSRNSSIALGLRRAYAVFNY 112
+ +L + + E D I+GH D + S+ L RA AV Y
Sbjct: 252 GQRELDKLAEVLLDVVAAIPEDIDWILRIDGHTDRIPINTEAFPSNWELSTARAVAVVRY 311
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ G+ +RM +G+ P G +A +NRR + L
Sbjct: 312 LASEGVPQNRMVAAGFGEFFPVASGGSAEALRQNRRIEIKL 352
>gi|148264196|ref|YP_001230902.1| OmpA/MotB domain-containing protein [Geobacter uraniireducens Rf4]
gi|146397696|gb|ABQ26329.1| OmpA/MotB domain protein [Geobacter uraniireducens Rf4]
Length = 520
Score = 64.1 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 51/143 (35%), Gaps = 4/143 (2%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ + ++S+ + D + F+ + + LS +
Sbjct: 378 EVKGDNIEVSNAKPTQISQKMSVYRKFRFPD-IMFEFGQIELSNEVKKALSEVAEQARTD 436
Query: 80 --DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVY 136
I+GH D +GS ++ L ++RA A+ +Y + + I +R+ V GK
Sbjct: 437 KTWLYLRIDGHTDSIGSVGYNMDLSIKRAIAIASYLIIKEGIDPTRVFVKGMGKSKLIAD 496
Query: 137 GHDEDAYAKNRRAIVFLKGCRAN 159
D NRR V + N
Sbjct: 497 NSTTDGRRMNRRFEVLFLVPKGN 519
>gi|326329962|ref|ZP_08196276.1| outer membrane porin OprF [Nocardioidaceae bacterium Broad-1]
gi|325952170|gb|EGD44196.1| outer membrane porin OprF [Nocardioidaceae bacterium Broad-1]
Length = 253
Score = 64.1 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 47/142 (33%), Gaps = 11/142 (7%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDT-------SSYSIRPADIQVLSNL 72
+ + S P S + +S + + V+ L
Sbjct: 113 AEATTEPEPSEPAVTAEASPTPTAEEREAAQAELDRFRSIGFEHNSDVLTGDGLGVVKAL 172
Query: 73 GSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
+ E D IEGHAD G + L RRA V + V G+ A R+ YG+
Sbjct: 173 AATLTEHPDVTVRIEGHADITGMLAHTQDLSERRAKRVLDTLVGLGVEADRLSSKGYGET 232
Query: 132 MPSVYGHDEDAYAKNRRAIVFL 153
P V G + NRR +
Sbjct: 233 RPIVPGKPDPG---NRRVEFVI 251
>gi|255530025|ref|YP_003090397.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366]
gi|255343009|gb|ACU02335.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366]
Length = 585
Score = 64.1 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 49/121 (40%), Gaps = 6/121 (4%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNS 97
+E +++++D + + IR L L ++ + + H D G+
Sbjct: 462 QTKENNKPIRLENIYYDFNKWDIRADAAAELEKLVQIMKDNSRIWIELGSHTDSRGNDAY 521
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH-----DEDAYAKNRRAIVF 152
+ L +RA + Y ++RGI +R++ YG+ + E+ + NRR
Sbjct: 522 NFTLSQKRAESAVTYMISRGIEKNRIEARGYGETLLLNRCANGIKCTEEEHQLNRRTEFK 581
Query: 153 L 153
+
Sbjct: 582 I 582
>gi|75676928|ref|YP_319349.1| hypothetical protein Nwi_2744 [Nitrobacter winogradskyi Nb-255]
gi|74421798|gb|ABA05997.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255]
Length = 342
Score = 64.1 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 45/118 (38%), Gaps = 12/118 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIEGHADELGS----R 95
VFFDT+ ++ P L + L D ++GH D
Sbjct: 222 FQSEVFFDTAQATLLPEGKAELDKVAGALTDLDKQIPSEIAWVLRVDGHTDVRPIKSPVF 281
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA +V Y + G+ R+ +G+ P E+AY +NRR + L
Sbjct: 282 KSNWDLSAARAISVVQYLASLGVPPQRLVAAGFGEFQPLDPDATEEAYKRNRRIELKL 339
>gi|332292539|ref|YP_004431148.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332170625|gb|AEE19880.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 652
Score = 64.1 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 58/126 (46%), Gaps = 7/126 (5%)
Query: 35 LNESSLQEQFSSSVG-DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADEL 92
L E + + + + + ++FD + IRP L+ + S +++ + + H D
Sbjct: 524 LTEVGVGDDLAKLLNLNPIYFDYNKSDIRPDAALELTKVISAMKQVPDMVISVRSHTDSR 583
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH-----DEDAYAKNR 147
G + +++L RRA + Y ++RGI A+R+ YG+ + E+ + NR
Sbjct: 584 GKDDYNLSLSDRRAKSTVAYIISRGIDANRISGQGYGETQLVNSCNNNADCTEEQHQLNR 643
Query: 148 RAIVFL 153
R+ +
Sbjct: 644 RSEFIV 649
>gi|327404809|ref|YP_004345647.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
16823]
gi|327320317|gb|AEA44809.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
Length = 454
Score = 64.1 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 26/102 (25%), Positives = 41/102 (40%), Gaps = 2/102 (1%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+ F ++S ++P VL + + E I GH D G + + L +RA AV
Sbjct: 350 ILFASNSDQLKPESYGVLKEIATALSENPAVRVKIVGHTDSDGEESFNAELSKKRALAVK 409
Query: 111 NYFVARGIS-ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
++ ASRM+ G+ P+ A NRR
Sbjct: 410 QALISEFKIEASRMETDGKGENEPTDSNATSVGKANNRRVEF 451
>gi|192360106|ref|YP_001981638.1| OmpA family protein [Cellvibrio japonicus Ueda107]
gi|190686271|gb|ACE83949.1| OmpA family protein [Cellvibrio japonicus Ueda107]
Length = 576
Score = 64.1 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Query: 57 SSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA 115
S + + L L ++E + + G +D G ++ ++AL LRRA V ++ +
Sbjct: 480 GSDQLDSKSLSDLERLVKYVEVNAPKRLQLFGFSDSEGDKHENLALSLRRAKVVEDHLIK 539
Query: 116 RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RGI + G E P E NRR V++
Sbjct: 540 RGIYP--LVAKGMGDEAPLASSDTEAGRHINRRVEVWI 575
>gi|68249712|ref|YP_248824.1| outer membrane protein P5 [Haemophilus influenzae 86-028NP]
gi|68057911|gb|AAX88164.1| Outer membrane protein P5 [Haemophilus influenzae 86-028NP]
Length = 359
Score = 64.1 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 54/138 (39%), Gaps = 10/138 (7%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG-SWLEKHDCDFLIEGH 88
+ + + + S+ V F +++P L ++ + + G+
Sbjct: 222 QGEAPVVAAPEMVSKTFSLNSDVTFAFGKANLKPQAQATLDSVYGEISQVKSAKVAVAGY 281
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY--- 143
D +GS ++ L RA +V NYFVA+G++A + T YGK P
Sbjct: 282 TDRIGSDAFNVKLSQERADSVANYFVAKGVAADAISATGYGKANPVTGATCDQVKGRKAL 341
Query: 144 ----AKNRRAIVFLKGCR 157
A +RR + + G +
Sbjct: 342 IACLAPDRRVEIAVNGTK 359
>gi|24213198|ref|NP_710679.1| flagellar motor protein [Leptospira interrogans serovar Lai str.
56601]
gi|24193917|gb|AAN47697.1| flagellar motor protein [Leptospira interrogans serovar Lai str.
56601]
Length = 223
Score = 64.1 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 45/120 (37%), Gaps = 4/120 (3%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK-HDCDFLIEGHADELGSR- 95
+ + + + F S + PA + + + L F IEGH D+ +
Sbjct: 86 KIIDGRMVVVLSSDILFPIGSAHLSPAGTAAIKEVTTLLASLEGKRFQIEGHTDDTPTGI 145
Query: 96 --NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L RA V + + G+ R+ S G P++ + + NRR + +
Sbjct: 146 KGYTNWELASSRALNVLHTMIKAGMPEVRISAASMGASRPALPNTSPENRSSNRRIEIVI 205
>gi|329755856|gb|AEC04325.1| outer membrane protein A [Pasteurella multocida]
Length = 354
Score = 64.1 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 50/121 (41%), Gaps = 10/121 (8%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLG-SWLEKHDCDFLIEGHADELGSRNSSIALGLRR 105
++ V F ++PA VL + + + G+ D LGS ++ L RR
Sbjct: 234 TLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSASVAVAGYTDRLGSDAYNLKLSQRR 293
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLKGC 156
A V NY VA+G++ + + T +G+ P A +RR + +KG
Sbjct: 294 ADTVANYLVAKGVAQNAISATGHGEANPVTGNKCDSVKGRKALIACLADDRRVEIAVKGN 353
Query: 157 R 157
+
Sbjct: 354 K 354
>gi|298481010|ref|ZP_06999205.1| lipoprotein PG3 [Bacteroides sp. D22]
gi|298273033|gb|EFI14599.1| lipoprotein PG3 [Bacteroides sp. D22]
Length = 255
Score = 64.1 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 28/159 (17%), Positives = 58/159 (36%), Gaps = 18/159 (11%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW--LE 77
+ + +++ + + + F T + ++ A LS + +
Sbjct: 96 AAAEAKQIEGAQVEQITDNNGLQAVKVTFDSGILFTTGNANLSAAAKSALSKFANNVLNQ 155
Query: 78 KHDCDFLIEGHADEL--------GSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSY 128
D D I G+ D S+ ++ L RA +V +Y ++ G+S +++ V
Sbjct: 156 NRDMDVSIYGYTDNQGWKNSTAAQSQQKNLNLSQERAQSVSSYLLSCGVSTNQIKSVQGM 215
Query: 129 GKEMPSVYGHDEDAYAKNRRAIVF-------LKGCRANT 160
G+ P +NRR V+ +K +A T
Sbjct: 216 GESDPVASNDTAAGREQNRRVEVYMYASEQMIKDAQAAT 254
>gi|239758178|gb|ACN65406.2| outer membrane protein A precursor [Edwardsiella tarda]
Length = 351
Score = 64.1 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 12/130 (9%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDCDFLIEGHADELGSRN 96
+ E ++ V F+ + Y+++ Q L L S ++ D ++ G+ D +GS
Sbjct: 214 VVETKRFTLKSDVLFNFNKYTLKAEGRQALDQLYSQLSSMDPKDGSVVVLGYTDRIGSDQ 273
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NR 147
++ L +RA V +Y V++GI A ++ GK P + A +R
Sbjct: 274 YNLKLSKQRAQTVVDYLVSKGIPADKIAARGMGKADPVTGSTCDNVKPRAALINCLAPDR 333
Query: 148 RAIVFLKGCR 157
R ++ +KG +
Sbjct: 334 RVVIEVKGIK 343
>gi|225628282|ref|ZP_03786316.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|254708420|ref|ZP_05170248.1| hypothetical protein BpinM_16075 [Brucella pinnipedialis
M163/99/10]
gi|254708727|ref|ZP_05170538.1| hypothetical protein BpinB_00411 [Brucella pinnipedialis B2/94]
gi|254714572|ref|ZP_05176383.1| hypothetical protein BcetM6_14787 [Brucella ceti M644/93/1]
gi|254717469|ref|ZP_05179280.1| hypothetical protein BcetM_13911 [Brucella ceti M13/05/1]
gi|256030252|ref|ZP_05443866.1| hypothetical protein BpinM2_06326 [Brucella pinnipedialis
M292/94/1]
gi|256160427|ref|ZP_05458116.1| hypothetical protein BcetM4_15574 [Brucella ceti M490/95/1]
gi|256255633|ref|ZP_05461169.1| hypothetical protein BcetB_15393 [Brucella ceti B1/94]
gi|260167927|ref|ZP_05754738.1| hypothetical protein BruF5_06077 [Brucella sp. F5/99]
gi|261219302|ref|ZP_05933583.1| OmpA/MotB domain-containing protein [Brucella ceti M13/05/1]
gi|261222836|ref|ZP_05937117.1| OmpA/MotB domain-containing protein [Brucella ceti B1/94]
gi|261315919|ref|ZP_05955116.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis
M163/99/10]
gi|261316219|ref|ZP_05955416.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis B2/94]
gi|261322363|ref|ZP_05961560.1| OmpA/MotB domain-containing protein [Brucella ceti M644/93/1]
gi|261757366|ref|ZP_06001075.1| OmpA/MotB domain-containing protein [Brucella sp. F5/99]
gi|265987280|ref|ZP_06099837.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis
M292/94/1]
gi|265998795|ref|ZP_06111352.1| OmpA/MotB domain-containing protein [Brucella ceti M490/95/1]
gi|225616128|gb|EEH13176.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|260921420|gb|EEX88073.1| OmpA/MotB domain-containing protein [Brucella ceti B1/94]
gi|260924391|gb|EEX90959.1| OmpA/MotB domain-containing protein [Brucella ceti M13/05/1]
gi|261295053|gb|EEX98549.1| OmpA/MotB domain-containing protein [Brucella ceti M644/93/1]
gi|261295442|gb|EEX98938.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis B2/94]
gi|261304945|gb|EEY08442.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis
M163/99/10]
gi|261737350|gb|EEY25346.1| OmpA/MotB domain-containing protein [Brucella sp. F5/99]
gi|262553484|gb|EEZ09253.1| OmpA/MotB domain-containing protein [Brucella ceti M490/95/1]
gi|264659477|gb|EEZ29738.1| OmpA/MotB domain-containing protein [Brucella pinnipedialis
M292/94/1]
Length = 343
Score = 64.1 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 48/119 (40%), Gaps = 13/119 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIEGHADELG-----S 94
V F T S I P + L + + + + + ++GH D +
Sbjct: 222 FQSEVLFPTGSAEINPKGQVEMKKLANAIIQLNREIPDDINWVLRVDGHTDNVPLAGTGR 281
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA AV + +A G+ A+R+ +G+ P + DA A+NRR + L
Sbjct: 282 FRDNWELSSARATAVVKFLIANGVPANRLVAAGFGEYQPLDTANTADARARNRRIELKL 340
>gi|15602651|ref|NP_245723.1| hypothetical protein PM0786 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12721089|gb|AAK02870.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 353
Score = 64.1 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 50/121 (41%), Gaps = 10/121 (8%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLG-SWLEKHDCDFLIEGHADELGSRNSSIALGLRR 105
++ V F ++PA VL + + + G+ D LGS ++ L RR
Sbjct: 233 TLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSASVAVAGYTDRLGSDAYNLKLSQRR 292
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLKGC 156
A V NY VA+G++ + + T +G+ P A +RR + +KG
Sbjct: 293 ADTVANYLVAKGVAQNAISATGHGEANPVTGNKCDSVKGRKALIACLADDRRVEIAVKGN 352
Query: 157 R 157
+
Sbjct: 353 K 353
>gi|17986607|ref|NP_539241.1| hypothetical protein BMEI0324 [Brucella melitensis bv. 1 str. 16M]
gi|62290586|ref|YP_222379.1| hypothetical protein BruAb1_1699 [Brucella abortus bv. 1 str.
9-941]
gi|82700502|ref|YP_415076.1| hypothetical protein BAB1_1726 [Brucella melitensis biovar Abortus
2308]
gi|163845293|ref|YP_001622948.1| hypothetical protein BSUIS_B1189 [Brucella suis ATCC 23445]
gi|189024803|ref|YP_001935571.1| hypothetical protein BAbS19_I16130 [Brucella abortus S19]
gi|225853169|ref|YP_002733402.1| hypothetical protein BMEA_A1766 [Brucella melitensis ATCC 23457]
gi|237816090|ref|ZP_04595086.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|254689881|ref|ZP_05153135.1| hypothetical protein Babob68_06877 [Brucella abortus bv. 6 str.
870]
gi|254698031|ref|ZP_05159859.1| hypothetical protein Babob28_10068 [Brucella abortus bv. 2 str.
86/8/59]
gi|254730915|ref|ZP_05189493.1| hypothetical protein Babob42_06907 [Brucella abortus bv. 4 str.
292]
gi|256045322|ref|ZP_05448216.1| hypothetical protein Bmelb1R_12582 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256061749|ref|ZP_05451886.1| hypothetical protein Bneo5_15516 [Brucella neotomae 5K33]
gi|256114280|ref|ZP_05455025.1| hypothetical protein Bmelb3E_15803 [Brucella melitensis bv. 3 str.
Ether]
gi|256258134|ref|ZP_05463670.1| hypothetical protein Babob9C_12474 [Brucella abortus bv. 9 str.
C68]
gi|256263341|ref|ZP_05465873.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 2 str.
63/9]
gi|256370121|ref|YP_003107632.1| flagellar motor protein [Brucella microti CCM 4915]
gi|260547172|ref|ZP_05822910.1| OmpA/MotB domain-containing protein [Brucella abortus NCTC 8038]
gi|260565786|ref|ZP_05836269.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 1 str.
16M]
gi|260755413|ref|ZP_05867761.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 6 str.
870]
gi|260758635|ref|ZP_05870983.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 4 str.
292]
gi|260762467|ref|ZP_05874804.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260884428|ref|ZP_05896042.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 9 str.
C68]
gi|261325753|ref|ZP_05964950.1| OmpA/MotB domain-containing protein [Brucella neotomae 5K33]
gi|265991747|ref|ZP_06104304.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265995585|ref|ZP_06108142.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 3 str.
Ether]
gi|297248983|ref|ZP_06932691.1| chemotaxis protein MotB [Brucella abortus bv. 5 str. B3196]
gi|17982219|gb|AAL51505.1| chemotaxis motb protein [Brucella melitensis bv. 1 str. 16M]
gi|62196718|gb|AAX75018.1| OmpA family protein [Brucella abortus bv. 1 str. 9-941]
gi|82616603|emb|CAJ11682.1| OmpA/MotB domain [Brucella melitensis biovar Abortus 2308]
gi|163676016|gb|ABY40126.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|189020375|gb|ACD73097.1| OmpA/MotB domain protein [Brucella abortus S19]
gi|225641534|gb|ACO01448.1| OmpA/MotB domain protein [Brucella melitensis ATCC 23457]
gi|237788753|gb|EEP62965.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|256000284|gb|ACU48683.1| flagellar motor protein [Brucella microti CCM 4915]
gi|260095537|gb|EEW79415.1| OmpA/MotB domain-containing protein [Brucella abortus NCTC 8038]
gi|260151159|gb|EEW86254.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 1 str.
16M]
gi|260668953|gb|EEX55893.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 4 str.
292]
gi|260672893|gb|EEX59714.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260675521|gb|EEX62342.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 6 str.
870]
gi|260873956|gb|EEX81025.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 9 str.
C68]
gi|261301733|gb|EEY05230.1| OmpA/MotB domain-containing protein [Brucella neotomae 5K33]
gi|262766869|gb|EEZ12487.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 3 str.
Ether]
gi|263002703|gb|EEZ15106.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263093340|gb|EEZ17409.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 2 str.
63/9]
gi|297174116|gb|EFH33473.1| chemotaxis protein MotB [Brucella abortus bv. 5 str. B3196]
gi|326409725|gb|ADZ66790.1| OmpA/MotB domain protein [Brucella melitensis M28]
gi|326539433|gb|ADZ87648.1| OmpA/MotB domain protein [Brucella melitensis M5-90]
Length = 343
Score = 64.1 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 47/119 (39%), Gaps = 13/119 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIEGHADELG-----S 94
V F T S I P + L + + + + ++GH D +
Sbjct: 222 FQSEVLFPTGSAEINPKGQVEMKKLADAIIQLNREIPDDINWVLRVDGHTDNVPLAGTGR 281
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA AV + +A G+ A+R+ +G+ P + DA A+NRR + L
Sbjct: 282 FRDNWELSSARATAVVKFLIANGVPANRLVAAGFGEYQPLDTANTADARARNRRIELKL 340
>gi|58698495|ref|ZP_00373400.1| peptidoglycan-associated lipoprotein [Wolbachia endosymbiont of
Drosophila ananassae]
gi|225630914|ref|YP_002727705.1| peptidoglycan-associated lipoprotein, putative [Wolbachia sp. wRi]
gi|58534989|gb|EAL59083.1| peptidoglycan-associated lipoprotein [Wolbachia endosymbiont of
Drosophila ananassae]
gi|225592895|gb|ACN95914.1| peptidoglycan-associated lipoprotein, putative [Wolbachia sp. wRi]
Length = 159
Score = 64.1 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 62/159 (38%), Gaps = 14/159 (8%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS-SYSIRPADI 66
+++ + ++G+ + K ++ +N Q VFF S +
Sbjct: 5 LVIMCCFCLLLTGVSSCPKKGANTTNKINSVVKQIG-----NKRVFFGYDESSIAEVSAD 59
Query: 67 QVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR-GISASRMKV 125
+L + + D + GH D GS ++ALG RRA A + V+ +R+K
Sbjct: 60 ALLDVMEVLQDNPDAKVTLTGHTDNRGSHEYNLALGARRADAAKKFMVSCTPYIENRIKT 119
Query: 126 TSYGKEMPSVYGHD-------EDAYAKNRRAIVFLKGCR 157
S G+ P V D E +AKNRR G +
Sbjct: 120 ASKGETEPLVNVKDDSRNSKYEKEHAKNRRVEFSFSGIK 158
>gi|126739844|ref|ZP_01755535.1| hypothetical protein RSK20926_14189 [Roseobacter sp. SK209-2-6]
gi|126719076|gb|EBA15787.1| hypothetical protein RSK20926_14189 [Roseobacter sp. SK209-2-6]
Length = 791
Score = 63.7 bits (153), Expect = 7e-09, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 42/125 (33%), Gaps = 14/125 (11%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE--------KHDCDFLIEGHADE-- 91
E V F S + A + + L+ + + ++GH D
Sbjct: 663 EGDRFVFASEVLFPPGSADLSAAGQAEIGKVAQILQSVVVEIPAEINWIIRVDGHTDNTT 722
Query: 92 ---LGSRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+ + L RA +V Y + GI R+ +G+ P +A A+NR
Sbjct: 723 MLGHPKYSDNWELSQGRALSVVRYMIENLGIPPGRLAANGFGEFQPVNSADTPEARAQNR 782
Query: 148 RAIVF 152
R +
Sbjct: 783 RIELK 787
>gi|253699085|ref|YP_003020274.1| OmpA/MotB domain protein [Geobacter sp. M21]
gi|251773935|gb|ACT16516.1| OmpA/MotB domain protein [Geobacter sp. M21]
Length = 1709
Score = 63.7 bits (153), Expect = 7e-09, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 44/143 (30%), Gaps = 9/143 (6%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-K 78
+ D + + E ++ +++ + F T I +++L + + +
Sbjct: 75 SVFAQDQGDRTEKRQVAEKEVKTVKVANLVPPIRFRTGDAEISSEYLELLRGVLEKMRGR 134
Query: 79 HDCDFLIEGHADELG-------SRNSSIALGLRRAYAVFNYFV-ARGISASRMKVTSYGK 130
+ GHAD + L RA Y A + + G
Sbjct: 135 DNVRLHFVGHADTQQLSGPLKEKFGDNTGLSRERAGTTAEYCQRALALPPEAISYQGLGD 194
Query: 131 EMPSVYGHDEDAYAKNRRAIVFL 153
P E+ A NRR V +
Sbjct: 195 AKPVAPNSTEEGRALNRRVEVEV 217
Score = 40.6 bits (93), Expect = 0.075, Method: Composition-based stats.
Identities = 5/27 (18%), Positives = 7/27 (25%)
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRA 149
+ G +P NRR
Sbjct: 350 FESDGKGSALPVASNETPQGRVLNRRV 376
>gi|114764947|ref|ZP_01444120.1| OmpA family protein [Pelagibaca bermudensis HTCC2601]
gi|114542659|gb|EAU45683.1| OmpA family protein [Roseovarius sp. HTCC2601]
Length = 221
Score = 63.7 bits (153), Expect = 7e-09, Method: Composition-based stats.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 4/138 (2%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
G ++ L E+F+ V V F +S + L +W+ +
Sbjct: 43 GNATMNNTQIQNGDRRYVIDLGERFAEEVPTMVTFAFNSAQLDNGARATLREQANWIRQF 102
Query: 80 D-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT-SYGKEMPSVYG 137
F + GH D +GS + LG+ RA AV +Y A+GIS R++ SYG+ P +
Sbjct: 103 PEVRFRVYGHTDLVGSPAYNKRLGMARAQAVVSYLAAQGISRERLEAVVSYGETQPLIV- 161
Query: 138 HDEDAYAKNRRAIVFLKG 155
+ +NRR + + G
Sbjct: 162 -TSERERRNRRTVTEVSG 178
>gi|86359103|ref|YP_470995.1| hypothetical protein RHE_CH03512 [Rhizobium etli CFN 42]
gi|86283205|gb|ABC92268.1| probable outer membrane protein [Rhizobium etli CFN 42]
Length = 343
Score = 63.7 bits (153), Expect = 7e-09, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 38/102 (37%), Gaps = 5/102 (4%)
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG-----SRNSSIALGLRRAYAVFN 111
+ +L + + ++GH D + + L RA +V
Sbjct: 239 GQTEMAKLAAALLDLAKEIPPEINWVLRVDGHTDNVPLAGTGRYRDNWELSSERAISVVK 298
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ + +G+ A R+ +G+ P G DA A NRR + L
Sbjct: 299 FLIGQGVPADRLVAAGFGEFQPIAPGDTPDARATNRRIELKL 340
>gi|237716264|ref|ZP_04546745.1| outer membrane protein [Bacteroides sp. D1]
gi|294807688|ref|ZP_06766481.1| OmpA family protein [Bacteroides xylanisolvens SD CC 1b]
gi|229443911|gb|EEO49702.1| outer membrane protein [Bacteroides sp. D1]
gi|294445124|gb|EFG13798.1| OmpA family protein [Bacteroides xylanisolvens SD CC 1b]
Length = 238
Score = 63.7 bits (153), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/159 (16%), Positives = 58/159 (36%), Gaps = 18/159 (11%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW--LE 77
+ + +++ + + + F T + ++ A LS + +
Sbjct: 79 AAAEAKQIEGAQVEQITDNNGLQAVKVTFDSGILFTTGNANLSAAAKSALSKFANNVLNQ 138
Query: 78 KHDCDFLIEGHADEL--------GSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSY 128
D D I G+ D S+ ++ L RA +V +Y ++ G+S +++ V
Sbjct: 139 NRDMDVSIYGYTDNQGWKNSTAAQSQQKNLNLSQERAQSVSSYLLSCGVSTNQIKSVQGM 198
Query: 129 GKEMPSVYGHDEDAYAKNRRAIVF-------LKGCRANT 160
G+ P +NRR V+ ++ +A T
Sbjct: 199 GESDPVASNDTAAGREQNRRVEVYMYASEQMIRDAQAAT 237
>gi|167626696|ref|YP_001677196.1| OmpA family protein [Francisella philomiragia subsp. philomiragia
ATCC 25017]
gi|167596697|gb|ABZ86695.1| OmpA family protein [Francisella philomiragia subsp. philomiragia
ATCC 25017]
Length = 418
Score = 63.7 bits (153), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/182 (15%), Positives = 60/182 (32%), Gaps = 28/182 (15%)
Query: 1 MQYS-TIFIILSAITMMSISGIDNLDTKISSPDTVLNESSL----------------QEQ 43
M+ I+L + ++ S + ++Q
Sbjct: 1 MKKLFNFAIVLLLVFTIAGCETFTGSENPSDENLSFPTLEPCTKKLIESNQSFICLKEQQ 60
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW----------LEKHDCDFLIEGHADELG 93
+ ++ FD SY++ Q+L+ L ++ + + + D+
Sbjct: 61 GPDLIQTNIKFDADSYNLNDQAKQILNKLYAYLKLTDTTTFTIRGYAGKVESKLLTDKNI 120
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+I L RA +V Y V RG+ + + + + G + P A N+R +
Sbjct: 121 LTEYNIRLSKNRAESVEEYLVRRGLDKNNGIIIKALGYQDPIAPNDTSSNRAINQRVEIT 180
Query: 153 LK 154
LK
Sbjct: 181 LK 182
>gi|262407869|ref|ZP_06084417.1| outer membrane protein [Bacteroides sp. 2_1_22]
gi|294646781|ref|ZP_06724404.1| OmpA family protein [Bacteroides ovatus SD CC 2a]
gi|262354677|gb|EEZ03769.1| outer membrane protein [Bacteroides sp. 2_1_22]
gi|292637941|gb|EFF56336.1| OmpA family protein [Bacteroides ovatus SD CC 2a]
Length = 255
Score = 63.7 bits (153), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/159 (16%), Positives = 58/159 (36%), Gaps = 18/159 (11%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW--LE 77
+ + +++ + + + F T + ++ A LS + +
Sbjct: 96 AAAEAKQIEGAQVEQITDNNGLQAVKVTFDSGILFTTGNANLSAAAKSALSKFANNVLNQ 155
Query: 78 KHDCDFLIEGHADEL--------GSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSY 128
D D I G+ D S+ ++ L RA +V +Y ++ G+S +++ V
Sbjct: 156 NRDMDVSIYGYTDNQGWKNSTAAQSQQKNLNLSQERAQSVSSYLLSCGVSTNQIKSVQGM 215
Query: 129 GKEMPSVYGHDEDAYAKNRRAIVF-------LKGCRANT 160
G+ P +NRR V+ ++ +A T
Sbjct: 216 GESDPVASNDTAAGREQNRRVEVYMYASEQMIRDAQAAT 254
>gi|332521842|ref|ZP_08398291.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
gi|332042514|gb|EGI78716.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
Length = 282
Score = 63.7 bits (153), Expect = 7e-09, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 60/146 (41%), Gaps = 8/146 (5%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+++ + ++ D +N S+ D + F + SY+I ++L+ +
Sbjct: 117 VTLALVTSLKKEVGLNDEDIEINVEKSV--VFISLSDKLLFKSGSYNITSRAKEILAKVA 174
Query: 74 SWLE-KHDCDFLIEGHADELGSR-----NSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
+ + K + + ++EGH D + + L ++R+ ++ G+ ++
Sbjct: 175 TVINGKPNFEAMVEGHTDNVPYNRGGVLQDNWDLSVKRSTSIVRALQELGVKPEQLIAAG 234
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFL 153
G +P V + A NRR +++
Sbjct: 235 RGDHLPLVSNDTAENRAINRRTKIYI 260
>gi|330819528|ref|YP_004348390.1| type IV / VI secretion system protein, DotU family [Burkholderia
gladioli BSR3]
gi|327371523|gb|AEA62878.1| type IV / VI secretion system protein, DotU family [Burkholderia
gladioli BSR3]
Length = 469
Score = 63.7 bits (153), Expect = 7e-09, Method: Composition-based stats.
Identities = 21/127 (16%), Positives = 42/127 (33%), Gaps = 5/127 (3%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHA 89
+ + + + + + F + I PA+I +L + + L + ++ GH
Sbjct: 337 QAGALAVDEQPDGRATVRLAAGLLFPSGGADIAPAEIPLLRQVAAALNQVKGRVIVVGHT 396
Query: 90 DELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD-EDAYA 144
D+ + AL RA R++ G P + A
Sbjct: 397 DDQPIRSLKFKDNFALSTARAQNTLAILAQGLDDPRRLEANGAGSSQPIATPPSLPENRA 456
Query: 145 KNRRAIV 151
+NRR +
Sbjct: 457 RNRRVEI 463
>gi|284039792|ref|YP_003389722.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
gi|283819085|gb|ADB40923.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
Length = 813
Score = 63.7 bits (153), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 6/110 (5%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
D++++D S+R + L + + + I H D G + AL L+RA A
Sbjct: 700 DNIYYDLDHSSLREDAARELDKVVATMRKYPSLIIEIRSHTDSRGDAERNKALSLQRAKA 759
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGH-----DEDAYAKNRRAIVFL 153
V Y ++GIS RM G+ E + +NRR +
Sbjct: 760 VAAYLASKGISRKRMATLGMGESQLVNNCTDGVICTEAEHQRNRRTEFRV 809
>gi|254694373|ref|ZP_05156201.1| hypothetical protein Babob3T_06882 [Brucella abortus bv. 3 str.
Tulya]
gi|261214683|ref|ZP_05928964.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 3 str.
Tulya]
gi|260916290|gb|EEX83151.1| OmpA/MotB domain-containing protein [Brucella abortus bv. 3 str.
Tulya]
Length = 343
Score = 63.7 bits (153), Expect = 7e-09, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 45/119 (37%), Gaps = 13/119 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGS--------WLEKHDCDFLIEGHADELG-----S 94
V F T S I P + L + + ++GH D +
Sbjct: 222 FQSEVLFPTGSAEINPKGQVEMKKLADAIIQLNPEIPDDINWVLRVDGHTDNVPLAGTGR 281
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA AV + +A G+ A+R+ +G+ P + DA A+NRR + L
Sbjct: 282 FRDNWELSSARATAVVKFLIANGVPANRLVAAGFGEYQPLDTANTADARARNRRIELKL 340
>gi|149369527|ref|ZP_01889379.1| outer membrane protein, peptidoglycan-associated lipoprotein
[unidentified eubacterium SCB49]
gi|149356954|gb|EDM45509.1| outer membrane protein, peptidoglycan-associated lipoprotein
[unidentified eubacterium SCB49]
Length = 631
Score = 63.7 bits (153), Expect = 7e-09, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADELGSRNSSIALGLRRA 106
V + ++FD ++I+P L + + ++K+ + E H D + ++AL RRA
Sbjct: 519 VLNPIYFDYDKHNIKPQAAFELDKVVTLMKKYPTMVVRAESHTDSRATEAYNLALSNRRA 578
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGH---DEDAYAKNRRAIVFL 153
A Y +++G+ +R+ G+ P ++ ++KNRR+ +
Sbjct: 579 QATVQYIISKGVDEARISGVGKGESTPINSCGDKCTDEQHSKNRRSEFTI 628
>gi|332877756|ref|ZP_08445497.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332684336|gb|EGJ57192.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 648
Score = 63.7 bits (153), Expect = 7e-09, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+ FD + +IRP L+ + + ++ I H D G+ + ++ L RRA A
Sbjct: 538 IKFDYNKANIRPDAAVELTKIVEVMREYPKMKIDIRSHTDSRGADSYNLKLSDRRAKATL 597
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGH-----DEDAYAKNRRAIVFL 153
+ V +GI R+K YG+ E+ + +NRR+ +
Sbjct: 598 EWIVKQGIDRKRLKAKGYGETRLVNGCSNGVPCTEEEHQENRRSEFIV 645
>gi|306844705|ref|ZP_07477290.1| Hypothetical protein BIBO1_1384 [Brucella sp. BO1]
gi|306274877|gb|EFM56647.1| Hypothetical protein BIBO1_1384 [Brucella sp. BO1]
Length = 343
Score = 63.7 bits (153), Expect = 7e-09, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 47/119 (39%), Gaps = 13/119 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIEGHADELG-----S 94
V F T S I P + L + + + + ++GH D +
Sbjct: 222 FQSEVLFPTGSAEINPKGQVEMKKLADAIIQLNREIPDDINWVLRVDGHTDNVPLAGTGR 281
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA AV + +A G+ A+R+ +G+ P + DA A+NRR + L
Sbjct: 282 FRDNWELSSARATAVVKFLIANGVPANRLVAAGFGEYQPLDTANTADARARNRRIELKL 340
>gi|316932465|ref|YP_004107447.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
DX-1]
gi|315600179|gb|ADU42714.1| OmpA/MotB domain protein [Rhodopseudomonas palustris DX-1]
Length = 341
Score = 63.7 bits (153), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 44/117 (37%), Gaps = 11/117 (9%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLG--------SWLEKHDCDFLIEGHADELGS---RN 96
VFFDT + P L + + ++GH D
Sbjct: 222 FQSEVFFDTGQALLLPEGRAELDKVADALKELDKQIPAELPWVVRVDGHTDRRPITGAFR 281
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA +V Y ++RG+ A R+ + + P EDAY +NRR + L
Sbjct: 282 SNWELSSARAISVVQYLMSRGVPAQRLVAAGFAEFQPLDTADTEDAYRRNRRIELKL 338
>gi|323496692|ref|ZP_08101743.1| putative outer membrane protein [Vibrio sinaloensis DSM 21326]
gi|323318274|gb|EGA71234.1| putative outer membrane protein [Vibrio sinaloensis DSM 21326]
Length = 204
Score = 63.7 bits (153), Expect = 7e-09, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 53/140 (37%), Gaps = 1/140 (0%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW- 75
++ D + + + F SY I P + + +
Sbjct: 48 VVNARDICPNTPLGAQVDNDGCGESLKTEEERQLRILFANDSYEINPIFSDQIQTMAEFL 107
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+ I+G A ++G ++ L +RA+AV + ++ + SR+ + YG+
Sbjct: 108 EKYQSASIQIQGFASKVGEPEYNLELSKKRAHAVEDELLSYYVEPSRVSIIGYGETRLEA 167
Query: 136 YGHDEDAYAKNRRAIVFLKG 155
G DE ++A NR+ + G
Sbjct: 168 QGDDETSHALNRKVTATVVG 187
>gi|297180147|gb|ADI16369.1| flagellar motor protein [uncultured bacterium HF130_12L15]
Length = 343
Score = 63.7 bits (153), Expect = 7e-09, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 44/110 (40%), Gaps = 5/110 (4%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG-----SRNSSIALGL 103
G V D + ++ + + ++GH D + + L
Sbjct: 231 GSEVINDAGRTEMAKLAEAIIDLQKEIPPEINWVLRVDGHTDNVPLSGTGRYRDNWELSS 290
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA +V Y +++G+ ASR+ +G+ P V G DA KNRR + L
Sbjct: 291 ARATSVVKYLISQGVPASRLVAAGFGEFQPLVEGDTPDARNKNRRIELKL 340
>gi|94971347|ref|YP_593395.1| OmpA/MotB family outer membrane protein [Candidatus Koribacter
versatilis Ellin345]
gi|94553397|gb|ABF43321.1| outer membrane protein, OmpA/MotB family [Candidatus Koribacter
versatilis Ellin345]
Length = 605
Score = 63.7 bits (153), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 52/150 (34%), Gaps = 9/150 (6%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQ 67
+ A +++ G+ + + ++ + + F + S P I
Sbjct: 454 FLFGAQALLNTGGVQGAAAEAVDYAKEAAKGTVVGHKAVYIN----FASGSDQPLPTSIA 509
Query: 68 VLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA---RGISASRM 123
L+ L L + I+G+ D++GS + L +RA AV YF R
Sbjct: 510 ALNRLKDELAINSQLAIQIDGYTDDVGSDILNQPLSEKRALAVKRYFQQTAPLSFPEMRF 569
Query: 124 -KVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
V +G + P A NRR +
Sbjct: 570 KSVAGHGSQNPLADNGTLQGKALNRRVEIT 599
>gi|209964175|ref|YP_002297090.1| OmpA family protein (probable proton motor MotY) [Rhodospirillum
centenum SW]
gi|209957641|gb|ACI98277.1| OmpA family protein (probable proton motor MotY) [Rhodospirillum
centenum SW]
Length = 356
Score = 63.7 bits (153), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEK-HDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
+VFFD + QVL ++ + + GHAD G + + L +RRA AV
Sbjct: 252 TVFFDWDRSDLTADARQVLRSVAGDARSGNIFAVQVTGHADTSGPADYNQRLSIRRAEAV 311
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
++ + +GI A ++ + G+ P V D NRR+++
Sbjct: 312 RDFLITQGIPADQIAIEGRGETDPLVPTADGVREPSNRRSVII 354
>gi|86160063|ref|YP_466848.1| OmpA/MotB family outer membrane protein [Anaeromyxobacter
dehalogenans 2CP-C]
gi|85776574|gb|ABC83411.1| outer membrane protein, OmpA/MotB family [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 412
Score = 63.7 bits (153), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 46/141 (32%), Gaps = 7/141 (4%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVF------FDTSSYSIRPADIQVLSNLG 73
G+ + D + V + + VG + + P+ +L L
Sbjct: 268 GVADPDDRCPEQAGVAADGCPRAYRLLEVGRDRIALREPVRFGARDDLLPSSAVLLDELA 327
Query: 74 SWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
L +E H D G +S L RA AV RGI R++ G E
Sbjct: 328 QALRDRPRLRVAVEVHTDGAGDAAASKRLSQARAEAVRAALAGRGIEGERVEARGIGAEH 387
Query: 133 PSVYGHDEDAYAKNRRAIVFL 153
P A+NRR V +
Sbjct: 388 PIASNKTARGRAQNRRTEVRI 408
>gi|56461082|ref|YP_156363.1| OprF [Idiomarina loihiensis L2TR]
gi|56180092|gb|AAV82814.1| Outer membrane porin [Idiomarina loihiensis L2TR]
Length = 363
Score = 63.7 bits (153), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 60/139 (43%), Gaps = 5/139 (3%)
Query: 21 IDNLDTKISSPDT-VLNESSLQEQFSSSVGDSVFFDTS--SYSIRPADIQVLSNLGSWLE 77
+D+ D ++P ++E+ + ++ + + + S +IR + + ++ +++
Sbjct: 216 VDSKDKCANTPKNYSVDETGCILYENETITEELLVEFDLNSSNIRSGERSDIKDMAEFMK 275
Query: 78 KH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSV 135
+H D I GH D G + L RRA AV N V + R+ +G+ P V
Sbjct: 276 EHPQLDITIHGHTDSTGEAKYNQWLSERRAEAVANALVKQHGIEKSRVDFKGHGESQPKV 335
Query: 136 YGHDEDAYAKNRRAIVFLK 154
+ +NRR LK
Sbjct: 336 RENSAADRQENRRIEATLK 354
>gi|77459872|ref|YP_349379.1| OmpA/MotB [Pseudomonas fluorescens Pf0-1]
gi|77383875|gb|ABA75388.1| phosphate ABC transporter substrate-binding protein, PhoT family
[Pseudomonas fluorescens Pf0-1]
Length = 444
Score = 63.7 bits (153), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 51/146 (34%), Gaps = 8/146 (5%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD-SVFFDT--SSYSIRPADIQVLS 70
+++ +G + + + S +V F S S+ Q L+
Sbjct: 300 AIVAANGFIAQTVQAIAVTPNALMPEGYQSLSRHAQRLTVNFRFEEGSASLDNKARQDLA 359
Query: 71 NLGSWLEKHDCD---FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
+ +++ HD + G D + L RA AV V G+ +V
Sbjct: 360 RVFDYIKHHDKTDRAVTLVGFGDAKDDPARADLLSKLRAMAVRRELVKNGVVLR--EVRG 417
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFL 153
+G MP ++ KNRR V++
Sbjct: 418 FGALMPVATNSGDEGRIKNRRVEVWV 443
>gi|294140555|ref|YP_003556533.1| sodium-type flagellar protein MotY [Shewanella violacea DSS12]
gi|293327024|dbj|BAJ01755.1| sodium-type flagellar protein MotY [Shewanella violacea DSS12]
Length = 289
Score = 63.7 bits (153), Expect = 8e-09, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 36/72 (50%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
LI+ + D G R+ + + +RA +V N+F++ GI+ R+ +G+ D
Sbjct: 215 VLIDAYTDSYGGRSINQKVSEQRADSVKNFFLSAGINQDRIYTVGHGERRHVASNATIDE 274
Query: 143 YAKNRRAIVFLK 154
+NRR ++ +
Sbjct: 275 RGRNRRVVIRIS 286
>gi|260752248|ref|YP_003225141.1| OmpA/MotB domain protein [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|258551611|gb|ACV74557.1| OmpA/MotB domain protein [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 366
Score = 63.7 bits (153), Expect = 8e-09, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 1/102 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
VFFD Y+I P +L N+ S + ++ G+ D G ++ L RRA +V
Sbjct: 258 VFFDFDKYNITPEAASILDNVASSYSQTGQARVVVAGYTDTAGPAKYNMGLSQRRADSVK 317
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
Y V +G+ M +YGK V D +NRR +
Sbjct: 318 AYLVGKGVPDDAMATEAYGKTHLLVQTADGVREPQNRRVEIT 359
>gi|241667271|ref|ZP_04754849.1| OmpA family protein [Francisella philomiragia subsp. philomiragia
ATCC 25015]
gi|254875822|ref|ZP_05248532.1| OmpA family protein [Francisella philomiragia subsp. philomiragia
ATCC 25015]
gi|254841843|gb|EET20257.1| OmpA family protein [Francisella philomiragia subsp. philomiragia
ATCC 25015]
Length = 418
Score = 63.7 bits (153), Expect = 8e-09, Method: Composition-based stats.
Identities = 29/182 (15%), Positives = 60/182 (32%), Gaps = 28/182 (15%)
Query: 1 MQYS-TIFIILSAITMMSISGIDNLDTKISSPDTVLNESSL----------------QEQ 43
M+ I+L + ++ S + ++Q
Sbjct: 1 MKKLFNFAIVLPLVLAIAGCETFTGSENPSDENLSFPTLEPCTKKLIESNQSFICLKEQQ 60
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW----------LEKHDCDFLIEGHADELG 93
+ ++ FD SY++ Q+L+ L ++ + + + D+
Sbjct: 61 GPDLIQTNIKFDADSYNLNDQAKQILNKLYAYLKLTDTTTFTIRGYAGKVESKLLTDKNI 120
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+I L RA +V Y V RG+ + + + + G + P A N+R +
Sbjct: 121 LTEYNIRLSKNRAESVEEYLVRRGLDKNNGIIIKALGYQDPIAPNDTSSNRAINQRVEIT 180
Query: 153 LK 154
LK
Sbjct: 181 LK 182
>gi|126665356|ref|ZP_01736338.1| flagellar motor protein MotB [Marinobacter sp. ELB17]
gi|126629984|gb|EBA00600.1| flagellar motor protein MotB [Marinobacter sp. ELB17]
Length = 313
Score = 63.7 bits (153), Expect = 8e-09, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 40/132 (30%), Gaps = 5/132 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ + D + + Q + V + F + S + +L + L + IE
Sbjct: 140 EPALNDGRIAVTQEQHRIVIRVEEKGSFPSGSAKLTWEFESLLLEIAEVLASIPGELTIE 199
Query: 87 GHADELGSRNSSIALGLRRAYAVFNY-----FVARGISASRMKVTSYGKEMPSVYGHDED 141
GH D + + A + + R+ V V +
Sbjct: 200 GHTDNVPISTDRFYSNWDLSAARAASVANALLASGTVEPDRLAVKGLADTAARVDNDSAE 259
Query: 142 AYAKNRRAIVFL 153
AKNRR + +
Sbjct: 260 NRAKNRRVEIII 271
>gi|85710327|ref|ZP_01041392.1| ompA family protein [Erythrobacter sp. NAP1]
gi|85689037|gb|EAQ29041.1| ompA family protein [Erythrobacter sp. NAP1]
Length = 320
Score = 63.7 bits (153), Expect = 8e-09, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 57/147 (38%), Gaps = 3/147 (2%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
M ++ ++ + + +Q++ +V+FDT +++ L N +
Sbjct: 162 MAIGENTAGIEKNAAATEALRGRFGDIDQYNIKSTTNVYFDTGRHNLSQQARAELCNAAA 221
Query: 75 WLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASR--MKVTSYGKE 131
E + L+ G+ D GS+ + L RRA +V N+ + + T +
Sbjct: 222 QAEATDNALLLVVGYTDSTGSQEVNQRLSERRAGSVVNFLQQQCGWKPWRMLSPTGMAEA 281
Query: 132 MPSVYGHDEDAYAKNRRAIVFLKGCRA 158
P+ A+NRR V + ++
Sbjct: 282 DPAADNTTAYGKAQNRRVAVNVLVSKS 308
>gi|283853198|ref|ZP_06370451.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B]
gi|283571456|gb|EFC19463.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B]
Length = 245
Score = 63.7 bits (153), Expect = 8e-09, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 45/135 (33%), Gaps = 6/135 (4%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFL 84
+ VL + + S+ V F + L L + ++
Sbjct: 106 VSQKGLEGVLGATLESGTITISLPTGVLFPKDGVDLTDEGKVRLRTLHEFLIKTAGERIN 165
Query: 85 IEGHADELGS-----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
I G D+L + + RA AV Y ++ G++ +R+ T P
Sbjct: 166 IRGFTDDLPPAAGSRFRDNWEVSSLRAVAVLRYMLSLGMAPNRLTATGLADLEPLYPNTT 225
Query: 140 EDAYAKNRRAIVFLK 154
+ A+N+R L+
Sbjct: 226 PEHRARNQRVEFVLE 240
>gi|254522358|ref|ZP_05134413.1| OmpA domain protein [Stenotrophomonas sp. SKA14]
gi|219719949|gb|EED38474.1| OmpA domain protein [Stenotrophomonas sp. SKA14]
Length = 432
Score = 63.7 bits (153), Expect = 8e-09, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 2/98 (2%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNSSIALGLRRAYAVFN 111
F + ++ Q + + S L + H D GS ++ L RA AV
Sbjct: 329 FHAGTATLTGDSRQTIGAVASALRAVPAGARVEVAAHTDSAGSATTNQQLSQLRAEAVAQ 388
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
+G+ ++ + T YG+E P + A NRR
Sbjct: 389 ALQEQGVGSAALVPTGYGQEQPIADNRSDHGRALNRRI 426
>gi|332879955|ref|ZP_08447639.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332681951|gb|EGJ54864.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 650
Score = 63.7 bits (153), Expect = 8e-09, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 44/108 (40%), Gaps = 6/108 (5%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVF 110
++FD IRP L+ + + ++ I H D G+ + ++ L RRA A
Sbjct: 539 IYFDLDKSDIRPDAAVELAKIVEVMRENPKMKIDIRSHTDSRGADSYNLKLSDRRAKATL 598
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGH-----DEDAYAKNRRAIVFL 153
+ V +GI R+ YG+ ++ + NRR+ +
Sbjct: 599 EWIVKQGIERKRLTAKGYGETQLVNGCSNGVPCTDEEHQANRRSEFII 646
>gi|332306543|ref|YP_004434394.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332173872|gb|AEE23126.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 366
Score = 63.7 bits (153), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 59/139 (42%), Gaps = 2/139 (1%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
D + N S+ + S ++ + FD +S ++ D + ++ ++
Sbjct: 221 AKDQCANTPMNDKVDANGCSIFTEESKTMSLKILFDNNSSKLKNIDSASVQEFVDFMRRY 280
Query: 80 DCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYG 137
+IEG+A G+ ++ L + RA AV Y V + ++R++ YG+
Sbjct: 281 GSTDAVIEGYASAPGTEQYNMKLSVERAEAVRQYLVEQYNIDSARLEAVGYGETKLLDKA 340
Query: 138 HDEDAYAKNRRAIVFLKGC 156
+ +A+ KNRR ++
Sbjct: 341 NTREAHQKNRRIEAYVTAT 359
>gi|330447940|ref|ZP_08311588.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328492131|dbj|GAA06085.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 298
Score = 63.7 bits (153), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 58/135 (42%), Gaps = 3/135 (2%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVF-FDTSSYSIRPADIQVLSNLGSWLEK 78
+ +++ + D + L D V F+ + + Q L +L S+L+
Sbjct: 150 TVPSVNITQAMADFNQCRAQLPAMAYRDARDVVLQFNLGQRVVSSSQKQTLVDLASYLKH 209
Query: 79 HDC--DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
LI+GH D +GS +++ + RA V + G+ +S M++ S+G P
Sbjct: 210 DKNIKRVLIDGHTDNVGSSVANLQISKVRADDVASILRENGVRSSLMEIRSHGSRYPVAN 269
Query: 137 GHDEDAYAKNRRAIV 151
+ + AKNRR +
Sbjct: 270 NNTQQGKAKNRRVTI 284
>gi|283856455|ref|YP_163089.2| OmpA/MotB domain-containing protein [Zymomonas mobilis subsp.
mobilis ZM4]
gi|283775459|gb|AAV89978.2| OmpA/MotB domain protein [Zymomonas mobilis subsp. mobilis ZM4]
Length = 366
Score = 63.7 bits (153), Expect = 8e-09, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 1/102 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
VFFD Y+I P +L N+ S + ++ G+ D G ++ L RRA +V
Sbjct: 258 VFFDFDKYNITPEAASILDNVASSYAQTGQARVVVAGYTDTAGPAKYNMGLSQRRADSVK 317
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
Y V +G+ M +YGK V D +NRR +
Sbjct: 318 AYLVGKGVPDDAMATEAYGKTHLLVQTADGVREPQNRRVEIT 359
>gi|332882653|ref|ZP_08450265.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332679453|gb|EGJ52438.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 290
Score = 63.7 bits (153), Expect = 8e-09, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 43/114 (37%), Gaps = 6/114 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSS----IA 100
++ D + F + SY+I VL + ++ +F++EGH D++ +
Sbjct: 152 INISDKMLFSSGSYTISKNAKNVLEKVAKVVKNKPDFEFMVEGHTDDVRIKKDCIRDNWD 211
Query: 101 LGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L + RA + RM +P + A+NRR + +
Sbjct: 212 LSVMRATEIVRVLQNDFGIAPERMTAAGRSYYVPVASNTTAEGRAQNRRTRIVV 265
>gi|332521405|ref|ZP_08397859.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
gi|332042804|gb|EGI79003.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
Length = 646
Score = 63.7 bits (153), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 7/113 (6%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADELGSRNSSIALGLRRA 106
V + +FFD +IRP L N+ + +H + IE H D G + L RRA
Sbjct: 528 VINPIFFDYDKSNIRPDAAYELENIVVVMREHPNMVIKIESHTDSRGRDKYNEKLSDRRA 587
Query: 107 YAVFNYFVARGISASRM-KVTSYGKEMPSVYGHD-----EDAYAKNRRAIVFL 153
+ +Y +RGI+ R+ YG+ + E+ + KNRR+ +
Sbjct: 588 KSTRDYLFSRGIAKDRIESAIGYGESQLLNKCSNGVKCSEEEHQKNRRSKFII 640
>gi|120437856|ref|YP_863542.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
gi|117580006|emb|CAL68475.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
Length = 320
Score = 63.7 bits (153), Expect = 8e-09, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 48/129 (37%), Gaps = 7/129 (5%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
L+ + S+ + + FD+ S+++ + + LG+ + D LIEGH D
Sbjct: 177 GKGLSVEQRDGKVYVSMENKLLFDSGSWAVNSEGRKAVQQLGTVLGQNPDIAVLIEGHTD 236
Query: 91 ELGSR-----NSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYA 144
+ + L +RA A+ I + G+ P E A
Sbjct: 237 NVPYGGSGQLKDNWDLSTKRATAIVQILRENSNIDPQSLTAAGRGEYAPVGSNDTEAGKA 296
Query: 145 KNRRAIVFL 153
KNRR V L
Sbjct: 297 KNRRIEVIL 305
>gi|332880160|ref|ZP_08447842.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332681919|gb|EGJ54834.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 242
Score = 63.7 bits (153), Expect = 8e-09, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 55/136 (40%), Gaps = 11/136 (8%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW--LEKHDCDFLIE 86
++ + +++ + + + F+TSS ++ L+ S D D I+
Sbjct: 91 NAQVESVTDANGLQAVKVTFDSGILFNTSSSALSSNATASLAKFASTVLNVNKDMDVAIK 150
Query: 87 GHADEL--------GSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYG 137
G+ D S ++ L L+RA +V NY G+S +++ V G+ P
Sbjct: 151 GYTDNQGWKNSTAAQSVQKNMDLSLQRANSVSNYLKQCGVSPTQITSVEGLGEADPVADN 210
Query: 138 HDEDAYAKNRRAIVFL 153
+NRR V+L
Sbjct: 211 STAAGREQNRRVEVYL 226
>gi|167719458|ref|ZP_02402694.1| ompA family protein [Burkholderia pseudomallei DM98]
Length = 277
Score = 63.7 bits (153), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 55/157 (35%), Gaps = 18/157 (11%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSS---------YSIRPADI 66
+ I + + ++ + + V T + I
Sbjct: 119 SACRDIAARYADAAGLGVIAVAPCNPSDVAAPLPERVELPTDTLFAFDKGGFEDISADGR 178
Query: 67 QVLSNLGSWLEKHDCDF---LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
+ L +L + ++ ++ G+ D LGS + L RA V +Y +A GI A+++
Sbjct: 179 RQLGDLVASIKAKILSINHLIVTGYTDRLGSDEHNARLSSERARTVADYMIAEGIPAAKI 238
Query: 124 KVTSYGKEMPSVYGHDED------AYAKNRRAIVFLK 154
G P V ++ + KNRR + +K
Sbjct: 239 TAVGRGAADPVVVCNNGEQPELIRCLQKNRRVEIRIK 275
>gi|150024426|ref|YP_001295252.1| OmpA family outer membrane protein [Flavobacterium psychrophilum
JIP02/86]
gi|150025241|ref|YP_001296067.1| OmpA family outer membrane protein [Flavobacterium psychrophilum
JIP02/86]
gi|149770967|emb|CAL42434.1| Probable outer membrane protein, OmpA family [Flavobacterium
psychrophilum JIP02/86]
gi|149771782|emb|CAL43256.1| Probable outer membrane protein, OmpA family [Flavobacterium
psychrophilum JIP02/86]
Length = 644
Score = 63.7 bits (153), Expect = 8e-09, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 42/108 (38%), Gaps = 6/108 (5%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
++FD + IR L+ + + L I H D + +++L RRA +
Sbjct: 534 IYFDLNKSVIRKDASVELAKILTVLNLNPTIKIDIRSHTDSRQTAAYNMSLSDRRAKSTI 593
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGH-----DEDAYAKNRRAIVFL 153
+ V +GIS R+ YG+ + + NRR+ +
Sbjct: 594 EWLVQKGISPDRLTGRGYGESQLVNECSDGVNCTGEQHQLNRRSEFII 641
>gi|284048662|ref|YP_003399001.1| OmpA/MotB domain protein [Acidaminococcus fermentans DSM 20731]
gi|283952883|gb|ADB47686.1| OmpA/MotB domain protein [Acidaminococcus fermentans DSM 20731]
Length = 351
Score = 63.7 bits (153), Expect = 8e-09, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 43/134 (32%), Gaps = 5/134 (3%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVF--FDTSSYSIRP---ADIQVLSNLGSWLEK 78
+ V + + D S P ++ + +
Sbjct: 215 KKAAPVVEEPVAPTVAEPAASAHVYNDYYLDSIHFDSDVDTPKASEAAKLANFVAVAKAH 274
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
D F + G+ D S + L RR V Y G++ASRM++ G+ P
Sbjct: 275 PDSTFKLVGNTDSDASNAYNEDLSKRRVLNVARYANDNGVAASRMQLNYKGENNPVSSNA 334
Query: 139 DEDAYAKNRRAIVF 152
E A NRR ++
Sbjct: 335 TEAGKADNRRVDIW 348
>gi|260220763|emb|CBA28654.1| hypothetical protein Csp_A08220 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 182
Score = 63.7 bits (153), Expect = 8e-09, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIAL 101
F V ++ F+ + ++ P L + + D + GH D GS ++ L
Sbjct: 70 PFLPPVRFTLQFEPGTSTLTPDSQNQLPGILEQATARAGGDIQVVGHTDRTGSPQANDTL 129
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L+RA AV N + RG + ++ G+ P V +NRRA + ++
Sbjct: 130 SLQRAQAVRNLLIQRGFEPALVEAIGRGEREPVVPTEANVNEPRNRRAEIIIR 182
>gi|254428132|ref|ZP_05041839.1| OmpA family protein [Alcanivorax sp. DG881]
gi|196194301|gb|EDX89260.1| OmpA family protein [Alcanivorax sp. DG881]
Length = 212
Score = 63.7 bits (153), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 51/117 (43%), Gaps = 10/117 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE----KHDCDFLIEGHADELGS------R 95
+ SV F +S ++P +LS+L L+ +HD ++ G D+L
Sbjct: 84 IGISGSVLFQLNSDQLQPEGEALLSDLVKPLQVFLSQHDDMLMVSGFTDDLPINRGNGRY 143
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ L +RA V + +G+ A ++ ++G P D D+ A+NRR +
Sbjct: 144 ADNWGLSAQRALTVTRTLIEQGMPADQVFAAAFGDNQPVAPNDDADSRARNRRVELT 200
>gi|154173933|ref|YP_001408144.1| OmpA/MotB [Campylobacter curvus 525.92]
gi|153793024|gb|EAU00162.2| OmpA/MotB [Campylobacter curvus 525.92]
Length = 249
Score = 63.7 bits (153), Expect = 8e-09, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 49/140 (35%), Gaps = 9/140 (6%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV-LSNLGSWLEKHDCDFLIEG 87
+S ++ ++ F + ++ F+ I D ++ L + + K D I+
Sbjct: 97 ASGAPEISIDESEDGFIIRLPSALLFERGKAQIENDDARLFLKRIAMVIAKLTPDVNIDI 156
Query: 88 -------HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
D + L RA +V VA G+ A R+ + P
Sbjct: 157 VGHTDDQRPDMNSIFKDNWQLSTARAISVVEEMVANGVDARRLIASGRASYDPFASNQTP 216
Query: 141 DAYAKNRRAIV-FLKGCRAN 159
+ AKN R + F+ R N
Sbjct: 217 EGRAKNNRVEIHFVSLDRKN 236
>gi|170725642|ref|YP_001759668.1| OmpA/MotB domain-containing protein [Shewanella woodyi ATCC 51908]
gi|169810989|gb|ACA85573.1| OmpA/MotB domain protein [Shewanella woodyi ATCC 51908]
Length = 367
Score = 63.7 bits (153), Expect = 8e-09, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+ F +S ++ Q + L +++ +H LI GHA ++G ++ L +RA AV
Sbjct: 254 IQFANNSSVVKNESYQQIEKLANYMNQHPKSTVLISGHASDVGKAEYNMMLSDKRANAVA 313
Query: 111 NYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
V + A R++ +G P + G A NRR + G +
Sbjct: 314 KILVEKYGIAQDRVEAKGFGITQPIIEGSSPAANKANRRIEAHVTGVK 361
>gi|91217489|ref|ZP_01254448.1| putative flagellar motor protein MotB [Psychroflexus torquis ATCC
700755]
gi|91184374|gb|EAS70758.1| putative flagellar motor protein MotB [Psychroflexus torquis ATCC
700755]
Length = 280
Score = 63.7 bits (153), Expect = 8e-09, Method: Composition-based stats.
Identities = 29/148 (19%), Positives = 57/148 (38%), Gaps = 8/148 (5%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
++T+ ++ + I+ D +N S+ D + F + + +VL
Sbjct: 116 SVTLALVTSLKGALGNINDEDIQINVEKGV--VFVSISDKLLFGAGQFKVTAEAKRVLGK 173
Query: 72 LGSWLEKH-DCDFLIEGHADELG----SRNSSIALGLRRAYAVFNYFV-ARGISASRMKV 125
+ + + D +F++EGH D + + L +RA AV + RM
Sbjct: 174 VATVVNDKKDFEFMVEGHTDNDPISRTNIEDNWDLSTKRATAVVRILQDEYDVDPKRMTA 233
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G+ +P E +KNRR + +
Sbjct: 234 AGRGEYIPVANNDTEAGQSKNRRTRIVI 261
>gi|49182356|gb|AAT57680.1| OmpA [Pasteurella multocida]
Length = 353
Score = 63.7 bits (153), Expect = 8e-09, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 10/121 (8%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRR 105
++ V F ++PA VL + + + + G+ D LGS ++ L RR
Sbjct: 233 TLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSASVAVAGYTDRLGSDAYNLKLSQRR 292
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLKGC 156
A V NY VA+G++ + + T +G+ P A +RR + +KG
Sbjct: 293 ADTVANYLVAKGVAQNAISATGHGEANPVTGNKCDSVKGRKALIACLADDRRVEIAVKGN 352
Query: 157 R 157
+
Sbjct: 353 K 353
>gi|109899245|ref|YP_662500.1| OmpA/MotB [Pseudoalteromonas atlantica T6c]
gi|109701526|gb|ABG41446.1| OmpA/MotB [Pseudoalteromonas atlantica T6c]
Length = 186
Score = 63.7 bits (153), Expect = 8e-09, Method: Composition-based stats.
Identities = 45/184 (24%), Positives = 78/184 (42%), Gaps = 32/184 (17%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG------- 49
MQ S IF + L +TM++ S + + + + V + ++ ++
Sbjct: 1 MQLSKIFKGITLALPIVTMVACSSGPSEEELAAESNRVAAAQAEADRKAAEEAKVQAGNM 60
Query: 50 --------------------DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGH 88
V+FD S+ +L ++ ++ +IEGH
Sbjct: 61 KPMLSPEEVMQKEKSALMEDQVVYFDFDRSSVSSKYYSLLDQHAAFLVKNPGQAVVIEGH 120
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D G+ +IALG RRA +V Y + G+SAS++ V SYG+E P A+A+NRR
Sbjct: 121 CDNRGTPEYNIALGERRAKSVETYLMNAGVSASQVSVVSYGEEKPVDTSGTAAAFAENRR 180
Query: 149 AIVF 152
++
Sbjct: 181 GVLV 184
>gi|167738461|ref|ZP_02411235.1| hypothetical protein Bpse14_10350 [Burkholderia pseudomallei 14]
gi|167815654|ref|ZP_02447334.1| hypothetical protein Bpse9_10954 [Burkholderia pseudomallei 91]
gi|254188891|ref|ZP_04895402.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237]
gi|157936570|gb|EDO92240.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237]
Length = 277
Score = 63.7 bits (153), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 55/157 (35%), Gaps = 18/157 (11%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSS---------YSIRPADI 66
+ I + + ++ + + V T + I
Sbjct: 119 SACRDIAARYADAAGLGVIAVAPCNPSDVAAPLPERVELPTDTLFAFDKGGFEDISADGR 178
Query: 67 QVLSNLGSWLEKHDCDF---LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
+ L +L + ++ ++ G+ D LGS + L RA V +Y +A GI A+++
Sbjct: 179 RQLGDLVASIKAKIFSINHLIVTGYTDRLGSDEHNARLSSERARTVADYMIAEGIPAAKI 238
Query: 124 KVTSYGKEMPSVYGHDED------AYAKNRRAIVFLK 154
G P V ++ + KNRR + +K
Sbjct: 239 TAVGRGAADPVVVCNNGEQPELIRCLQKNRRVEIRIK 275
>gi|213961779|ref|ZP_03390045.1| OmpA/MotB domain protein [Capnocytophaga sputigena Capno]
gi|213955568|gb|EEB66884.1| OmpA/MotB domain protein [Capnocytophaga sputigena Capno]
Length = 330
Score = 63.7 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 20/110 (18%), Positives = 43/110 (39%), Gaps = 6/110 (5%)
Query: 50 DSVFFDTSSYSIRPADIQVL-SNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
D+++FD +IR L + + +++ H D G+ + L +A +
Sbjct: 220 DNIYFDFGHTNIRKDASVQLAKIVAFLEDNPTLKIIVKVHTDSRGNDKYNRELTETQAKS 279
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGH-----DEDAYAKNRRAIVFL 153
+ + + RGI++ R+ YG E+ + N+R +
Sbjct: 280 IEQWLIKRGIASHRIIAKGYGATQLVNGCEKGVPCTEEEHQANKRVEFIV 329
>gi|85714417|ref|ZP_01045405.1| flagellar motor protein [Nitrobacter sp. Nb-311A]
gi|85698864|gb|EAQ36733.1| flagellar motor protein [Nitrobacter sp. Nb-311A]
Length = 342
Score = 63.7 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 4/109 (3%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD----ELGSRNSSIALGLR 104
++ + + + ++GH D S+ L
Sbjct: 231 AQAILLPEGKSELDKIANALTDLDKQIPSEIAWVLRVDGHTDVRPINSPVFKSNWDLSAA 290
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA +V Y V+RG+ R+ +G+ P G +DAY +NRR + L
Sbjct: 291 RAISVVQYLVSRGVPPQRLVAAGFGEFQPLDPGTTDDAYKRNRRIELKL 339
>gi|296269185|ref|YP_003651817.1| OmpA/MotB domain-containing protein [Thermobispora bispora DSM
43833]
gi|296091972|gb|ADG87924.1| OmpA/MotB domain protein [Thermobispora bispora DSM 43833]
Length = 193
Score = 63.7 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 58/148 (39%), Gaps = 8/148 (5%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
I+ ++++ ++ S D +E EQ + ++ V F ++ Q L + ++
Sbjct: 46 ITPVEDVIAEVESLDGTESEEKQGEQITLALTADVLFPLDKATLTAKARQRLREIAEKIK 105
Query: 78 KHDC--DFLIEGHADELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPS 134
+EGH D+ GS ++AL RRA AV ++ YG+ P
Sbjct: 106 SDGAGGLIRVEGHTDDQGSDAYNLALSRRRAEAVRRVLERELAGMNVTLQAKGYGESRPK 165
Query: 135 VYG-----HDEDAYAKNRRAIVFLKGCR 157
V E AKNRR + R
Sbjct: 166 VPNFIKGRPVEKNRAKNRRVEIIFTARR 193
>gi|260429336|ref|ZP_05783313.1| OmpA domain protein [Citreicella sp. SE45]
gi|260419959|gb|EEX13212.1| OmpA domain protein [Citreicella sp. SE45]
Length = 304
Score = 63.7 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 56/148 (37%), Gaps = 9/148 (6%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSS--------VGDSVFFDTSSYSIRPADI 66
+ G + +T +P ++ ++ + + F+T S S+ +
Sbjct: 153 STAAEGAPDGETPSETPAPQQTPEAIPGGEIAARLEREGHVILRDLSFETGSASLGETTV 212
Query: 67 QVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
L L ++ L+ GH D +GS ++ L +RA A +Y ARGI A ++
Sbjct: 213 SSLEELAAFLTADPSRRVLLVGHTDAVGSLAANTELSRKRAAAAESYLRARGIPAGQLGA 272
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G P + +NRR L
Sbjct: 273 QGAGYLSPVASNLTPEGREENRRIEAIL 300
>gi|325927851|ref|ZP_08189076.1| Type VI secretion system OmpA/MotB domain protein [Xanthomonas
perforans 91-118]
gi|325541841|gb|EGD13358.1| Type VI secretion system OmpA/MotB domain protein [Xanthomonas
perforans 91-118]
Length = 368
Score = 63.7 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 42/113 (37%), Gaps = 5/113 (4%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG----SRNSSIAL 101
+ + F + S + ++L + + LE+ ++ GH D+ + AL
Sbjct: 252 VRLASASMFPSGSAELDADQTRLLERVAAALEQVPGRVVVVGHTDDQPVRSLRFKDNFAL 311
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV-YGHDEDAYAKNRRAIVFL 153
RRA +V A R++ + G P A+NRR + L
Sbjct: 312 SARRAQSVGAVLAAGLRDPRRVQTSGAGDSQPIALPPQLPGNRARNRRVEILL 364
>gi|241761684|ref|ZP_04759771.1| OmpA/MotB domain protein [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|241373992|gb|EER63525.1| OmpA/MotB domain protein [Zymomonas mobilis subsp. mobilis ATCC
10988]
Length = 363
Score = 63.7 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 1/102 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
VFFD Y+I P +L N+ S + ++ G+ D G ++ L RRA +V
Sbjct: 255 VFFDFDKYNITPEAASILDNVASSYAQTGQARVVVAGYTDTAGPAKYNMGLSQRRADSVK 314
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
Y V +G+ M +YGK V D +NRR +
Sbjct: 315 AYLVGKGVPDDAMATEAYGKTHLLVQTADGVREPQNRRVEIT 356
>gi|167565907|ref|ZP_02358823.1| hypothetical protein BoklE_25339 [Burkholderia oklahomensis EO147]
Length = 215
Score = 63.7 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 10/116 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLS----NLGSWLEKHDCDFLIEGHADEL------GSR 95
+ SV F +S ++PA +L L ++L+ + ++ G AD+
Sbjct: 85 IGISGSVLFALNSDELQPAGRDLLKSLAGPLAAYLKANREILMVSGFADDQQVRAGNHRF 144
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ L +RA V F+A G+ AS + ++G E P D++ AKNRR +
Sbjct: 145 ADNWELSAKRALTVTRAFIAEGVPASSVFAAAFGSEQPVSPNSDDEGRAKNRRVEI 200
>gi|149370978|ref|ZP_01890573.1| outer membrane protein, OmpA family [unidentified eubacterium
SCB49]
gi|149355764|gb|EDM44322.1| outer membrane protein, OmpA family [unidentified eubacterium
SCB49]
Length = 323
Score = 63.7 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 46/129 (35%), Gaps = 7/129 (5%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
L + + S+ + + F++ S+ + + + LG + + LIEGH D
Sbjct: 182 GNGLTVEQREGKVYVSMENKLLFESGSWDVNSRGREAVVALGKVLGDNKEIAVLIEGHTD 241
Query: 91 ELGS-----RNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYA 144
+ + L +RA A+ + G+ P + + A
Sbjct: 242 NVPYGEKGLIKDNWDLSTKRATAIVAILTENNNIPKENLTAAGRGEYAPIASNNTSEGKA 301
Query: 145 KNRRAIVFL 153
KNRR V L
Sbjct: 302 KNRRIEVVL 310
>gi|53719284|ref|YP_108270.1| hypothetical protein BPSL1659 [Burkholderia pseudomallei K96243]
gi|52209698|emb|CAH35657.1| putative exported protein [Burkholderia pseudomallei K96243]
Length = 299
Score = 63.7 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 55/157 (35%), Gaps = 18/157 (11%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSS---------YSIRPADI 66
+ I + + ++ + + V T + I
Sbjct: 141 SACRDIAARYADAAGLGVIAVAPCNPSDVAAPLPERVELPTDTLFAFDKGGFEDISADGR 200
Query: 67 QVLSNLGSWLEKHDCDF---LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
+ L +L + ++ ++ G+ D LGS + L RA V +Y +A GI A+++
Sbjct: 201 RQLGDLVASIKAKIFSINHLIVTGYTDRLGSDEHNARLSSERARTVADYMIAEGIPAAKI 260
Query: 124 KVTSYGKEMPSVYGHDED------AYAKNRRAIVFLK 154
G P V ++ + KNRR + +K
Sbjct: 261 TAVGRGAADPVVVCNNGEQPELIRCLQKNRRVEIRIK 297
>gi|330888144|gb|EGH20805.1| ompA family protein [Pseudomonas syringae pv. mori str. 301020]
Length = 71
Score = 63.7 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 25/59 (42%)
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
L RA AV + + G+ R+ V YG++ P E A+NRR + +
Sbjct: 7 KLSKDRAQAVADVLMDLGVDEKRIHVEGYGQQFPVNANASERGRAQNRRVEIVFSDEKG 65
>gi|326796443|ref|YP_004314263.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
gi|326547207|gb|ADZ92427.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
Length = 280
Score = 63.7 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 58/138 (42%), Gaps = 5/138 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ ++ S + S + + F Y + + +L + + L + L+E
Sbjct: 135 SSLTQSGKVSISENESWISLELKSGLLFGEGEYELTNEAVALLIVISNILNSYPSPVLVE 194
Query: 87 GHADELG-----SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
G+ D+ +S+ +L RA AV + V RG++ + + E P V ++D
Sbjct: 195 GNTDDQPVSGAAPFSSNWSLSSLRASAVVDELVFRGVNPKLIAPIGFSSEHPKVRNRNDD 254
Query: 142 AYAKNRRAIVFLKGCRAN 159
+ A+NRR + + R +
Sbjct: 255 SRAQNRRVTLKISKLRTD 272
>gi|255263976|ref|ZP_05343318.1| OmpA family protein [Thalassiobium sp. R2A62]
gi|255106311|gb|EET48985.1| OmpA family protein [Thalassiobium sp. R2A62]
Length = 189
Score = 63.7 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 40/100 (40%), Gaps = 4/100 (4%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F T SY I A Q L N + +++ GH D S ++ L RA +V
Sbjct: 91 LFQTDSYHINNAGKQALMN--FFRSSGASAYIVTGHTDSRASDAYNMRLSQNRANSVARV 148
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ + A + V YG+ P H A+NRR +
Sbjct: 149 --GQSVGARIVDVRGYGERQPRADNHSHQGMAQNRRVEII 186
>gi|167894145|ref|ZP_02481547.1| ompA family protein [Burkholderia pseudomallei 7894]
Length = 277
Score = 63.7 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 55/157 (35%), Gaps = 18/157 (11%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSS---------YSIRPADI 66
+ I + + ++ + + V T + I
Sbjct: 119 SACRDIAARYADAAGLGVIAVAPCNPSDVAAPLPERVELPTDTLFAFDKGGFEDISADGR 178
Query: 67 QVLSNLGSWLEKHDCDF---LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
+ L +L + ++ ++ G+ D LGS + L RA V +Y +A GI A+++
Sbjct: 179 RQLGDLVASIKAKILSINHLIVTGYTDRLGSDEHNARLSSERARTVADYMIAEGIPAAKI 238
Query: 124 KVTSYGKEMPSVYGHDED------AYAKNRRAIVFLK 154
G P V ++ + KNRR + +K
Sbjct: 239 TAVGRGAADPVVVCNNGEQPELIRCLQKNRRVEIRIK 275
>gi|99082304|ref|YP_614458.1| OmpA/MotB [Ruegeria sp. TM1040]
gi|99038584|gb|ABF65196.1| OmpA/MotB [Ruegeria sp. TM1040]
Length = 352
Score = 63.7 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLRRAYAVFNY 112
FDT+S + L +L +++ H+ ++ GH D +G +IAL RRA +V
Sbjct: 248 FDTASAQVGEGPYDSLKHLATFMSDHESAVILLVGHTDTVGGLQGNIALSERRAASVRER 307
Query: 113 FVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ R + +R++V G P E+ NRR L
Sbjct: 308 LITRYGVDGARIQVAGAGYMAPLAPNTSEEGREINRRVEAVL 349
>gi|312131594|ref|YP_003998934.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132]
gi|311908140|gb|ADQ18581.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132]
Length = 765
Score = 63.7 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 47/110 (42%), Gaps = 7/110 (6%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
+++++D SY + Q L +G + + + H D GS +++ L RRA
Sbjct: 650 ENIYYDNESYKLGAQAKQSLRKIGELLQKSPELAIEVSSHTDTRGSAQANMILSERRAEE 709
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGH-----DEDAYAKNRRAIVFL 153
V + V + IS R+ G+ P + +A+NRR + +
Sbjct: 710 VKKFLV-QYISGHRISAVGKGESQPVNACGDGVQCTDAEHARNRRTEIRI 758
>gi|212636483|ref|YP_002313008.1| OmpA protein [Shewanella piezotolerans WP3]
gi|212557967|gb|ACJ30421.1| OmpA [Shewanella piezotolerans WP3]
Length = 364
Score = 63.7 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 60/137 (43%), Gaps = 2/137 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHD 80
D ++ N ++ + F T+S ++ + + +L ++ + +
Sbjct: 221 DQCPDTPATHKVDSNGCTIYQDAEDKFEIEAKFATNSAIVQESSYSDIKDLAEYMSKHPN 280
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHD 139
+ +I GHA G+ + ++AL RRA AV + + GI+ +R+ YG P + G
Sbjct: 281 SEVVIAGHASNTGAADYNMALSERRAIAVADVLINEYGIAPARVSSKGYGITQPLIEGSS 340
Query: 140 EDAYAKNRRAIVFLKGC 156
++A NRR + G
Sbjct: 341 KEANQANRRIEAHVSGT 357
>gi|220917668|ref|YP_002492972.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
gi|219955522|gb|ACL65906.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 259
Score = 63.7 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 49/130 (37%), Gaps = 6/130 (4%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
P V++ + + + + FFD ++RP + +L + + + +EGH D
Sbjct: 115 PVPVVSVLVEGRRLTVRLAATEFFDPGQAALRPQALALLDAIAVEIVPLERPLRVEGHTD 174
Query: 91 ELG-----SRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
E S+ L RA V Y A + + G P +A+
Sbjct: 175 ETPVGSGGRWMSNWELSATRAATVVGYLEQAHAARPALLAAVGLGSAHPLSTDATPEAHE 234
Query: 145 KNRRAIVFLK 154
+NRR + L+
Sbjct: 235 RNRRVELVLE 244
>gi|170025766|ref|YP_001722271.1| hypothetical protein YPK_3551 [Yersinia pseudotuberculosis YPIII]
gi|169752300|gb|ACA69818.1| type IV / VI secretion system protein, DotU family [Yersinia
pseudotuberculosis YPIII]
Length = 536
Score = 63.7 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 36/121 (29%), Gaps = 10/121 (8%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPAD--IQVLSNLGSWLEKHDCDFLIEGHADELG----S 94
+ F T ++ + + LG L D + GH D S
Sbjct: 385 PRGWLLIFTSDGAFRTGEATLSEEFINKKNIERLGLALAPWPGDIEVIGHTDNKPFRSTS 444
Query: 95 RNSSIALGLRRAYAVFNYFVA----RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
N+++ L RA V + + G+ P E+ +NRR
Sbjct: 445 GNNNLKLSAARASVVADKLRESTQINETHQREISAIGRGESDPLADNATEEGRKRNRRVD 504
Query: 151 V 151
+
Sbjct: 505 I 505
>gi|300694450|ref|YP_003750423.1| transmembrane protein, ompa/motb motif [Ralstonia solanacearum
PSI07]
gi|299076487|emb|CBJ35807.1| putative transmembrane protein, OmpA/MotB motif [Ralstonia
solanacearum PSI07]
Length = 215
Score = 63.7 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 10/116 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLG----SWLEKHDCDFLIEGHADELGSRN----- 96
+ SV F +S ++P ++L +L ++L+ D ++ G AD+
Sbjct: 85 IGISGSVLFALNSDQLQPEGRELLKSLAGPLSAYLKSRDEILMVSGFADDQQVHAGNRRF 144
Query: 97 -SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ L +RA V + GI + + ++G E P D++ AKNRR +
Sbjct: 145 ADNWELSAKRALTVTRALIDAGIPGASVFAAAFGSEQPVSSNTDDEGRAKNRRVEI 200
>gi|167918843|ref|ZP_02505934.1| ompA family protein [Burkholderia pseudomallei BCC215]
Length = 290
Score = 63.7 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 55/157 (35%), Gaps = 18/157 (11%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSS---------YSIRPADI 66
+ I + + ++ + + V T + I
Sbjct: 132 SACRDIAARYADAAGLGVIAVAPCNPSDVAAPLPERVELPTDTLFAFDKGGFEDISADGR 191
Query: 67 QVLSNLGSWLEKHDCDF---LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
+ L +L + ++ ++ G+ D LGS + L RA V +Y +A GI A+++
Sbjct: 192 RQLGDLVASIKAKILSINHLIVTGYTDRLGSDEHNARLSSERARTVADYMIAEGIPAAKI 251
Query: 124 KVTSYGKEMPSVYGHDED------AYAKNRRAIVFLK 154
G P V ++ + KNRR + +K
Sbjct: 252 TAVGRGAAEPVVVCNNGEQPELIRCLQKNRRVEIRIK 288
>gi|311748785|ref|ZP_07722570.1| putative OmpA family protein [Algoriphagus sp. PR1]
gi|311748788|ref|ZP_07722573.1| putative OmpA family protein [Algoriphagus sp. PR1]
gi|126577322|gb|EAZ81570.1| putative OmpA family protein [Algoriphagus sp. PR1]
gi|126577325|gb|EAZ81573.1| putative OmpA family protein [Algoriphagus sp. PR1]
Length = 805
Score = 63.3 bits (152), Expect = 9e-09, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 46/111 (41%), Gaps = 6/111 (5%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
D V++D Y IR VL LG D L+ H D S +I L RA A
Sbjct: 532 DIVYYDLDKYQIREDAKPVLDKLGELMNRYEFLDLLVGSHTDSRASDEYNITLSNNRAEA 591
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHD-----EDAYAKNRRAIVFLK 154
V Y I A R+++ +G++ D E + NRR+ + L+
Sbjct: 592 VTEYMAQYNIPAERIRLEWFGEQQLVNDCGDGVPCPETDHQLNRRSELVLE 642
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 5/108 (4%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAV 109
+++FD +R + L L++ IEGH D+ G + +L RRA AV
Sbjct: 681 TIYFDFDKSMLRSVHKKELERTAIMLKRMPNLMLYIEGHTDQRGDDAYNQSLSERRADAV 740
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGH----DEDAYAKNRRAIVFL 153
Y RGI RM+ T +G+ P + NRR + +
Sbjct: 741 KAYLTKRGIEGERMEETWFGETKPVNDCSELDCTSAMHQLNRRTELRV 788
>gi|320107635|ref|YP_004183225.1| OmpA/MotB domain-containing protein [Terriglobus saanensis SP1PR4]
gi|319926156|gb|ADV83231.1| OmpA/MotB domain protein [Terriglobus saanensis SP1PR4]
Length = 249
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/147 (21%), Positives = 51/147 (34%), Gaps = 3/147 (2%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
++A + ++ D + L + S SV F + AD +
Sbjct: 87 AMAAGQSADAANVNAKDAYNRVDSLAGTVAGLDKYKPLS-DVSVTFRFDKAVLTAADKKE 145
Query: 69 LSNLGSWLEK-HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI-SASRMKVT 126
L + S L+ + G D +G + AL RRA AV Y A+ + +
Sbjct: 146 LDAVASSLQTTRHYLLEVTGGTDAVGDAAYNYALSQRRADAVVTYLAAKYNIPPHKFYMV 205
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVFL 153
GK+ AKNRR V +
Sbjct: 206 GIGKDQEVATNKTAAGRAKNRRVQVRV 232
>gi|238750181|ref|ZP_04611684.1| OmpA domain protein [Yersinia rohdei ATCC 43380]
gi|238711725|gb|EEQ03940.1| OmpA domain protein [Yersinia rohdei ATCC 43380]
Length = 560
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSV 135
+ D LI GH+D GS + ++ L +RA V ++ + + + V G P
Sbjct: 473 KNPDTKVLIIGHSDNTGSPSFNMKLSEQRAQVVGDWLIKNSSIPVNNLIVRGKGALEPIA 532
Query: 136 YGHDEDAYAKNRRAIVFL 153
+ + +NRR V L
Sbjct: 533 SNNTKIGQDQNRRVEVLL 550
>gi|207722387|ref|YP_002252823.1| outer membrane protein [Ralstonia solanacearum MolK2]
gi|206587566|emb|CAQ18148.1| outer membrane protein [Ralstonia solanacearum MolK2]
Length = 215
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 10/116 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLG----SWLEKHDCDFLIEGHADELGSRN----- 96
+ SV F +S ++P ++L +L ++L+ D ++ G AD+
Sbjct: 85 IGISGSVLFALNSDQLQPEGRELLKSLAGPLSAYLQSRDEILMVSGFADDQQVHAGNRRF 144
Query: 97 -SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ L +RA V + GI + + ++G E P D++ AKNRR +
Sbjct: 145 ADNWELSAKRALTVTRALIDAGIPGASVFAAAFGSEQPVSSNADDEGRAKNRRVEI 200
>gi|145600375|ref|YP_001164451.1| OmpA-family membrane protein [Yersinia pestis Pestoides F]
gi|145212071|gb|ABP41478.1| OmpA-family membrane protein [Yersinia pestis Pestoides F]
Length = 529
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 36/121 (29%), Gaps = 10/121 (8%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPAD--IQVLSNLGSWLEKHDCDFLIEGHADELG----S 94
+ F T ++ + + LG L D + GH D S
Sbjct: 378 PRGWLLIFTSDGAFRTGEATLSEEFINKKNIERLGLALAPWPGDIEVIGHTDNKPFRSTS 437
Query: 95 RNSSIALGLRRAYAVFNYFVA----RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
N+++ L RA V + + G+ P E+ +NRR
Sbjct: 438 GNNNLKLSAARASVVADKLRESTQINETHQREISAIGRGESDPLADNATEEGRKRNRRVD 497
Query: 151 V 151
+
Sbjct: 498 I 498
>gi|126452529|ref|YP_001066330.1| ompA family protein [Burkholderia pseudomallei 1106a]
gi|134277725|ref|ZP_01764440.1| ompA family protein [Burkholderia pseudomallei 305]
gi|217421747|ref|ZP_03453251.1| ompA family protein [Burkholderia pseudomallei 576]
gi|237812370|ref|YP_002896821.1| OmpA family protein [Burkholderia pseudomallei MSHR346]
gi|242318072|ref|ZP_04817088.1| ompA family protein [Burkholderia pseudomallei 1106b]
gi|254179713|ref|ZP_04886312.1| ompA family protein [Burkholderia pseudomallei 1655]
gi|126226171|gb|ABN89711.1| ompA family protein [Burkholderia pseudomallei 1106a]
gi|134251375|gb|EBA51454.1| ompA family protein [Burkholderia pseudomallei 305]
gi|184210253|gb|EDU07296.1| ompA family protein [Burkholderia pseudomallei 1655]
gi|217395489|gb|EEC35507.1| ompA family protein [Burkholderia pseudomallei 576]
gi|237502710|gb|ACQ95028.1| OmpA family protein [Burkholderia pseudomallei MSHR346]
gi|242141311|gb|EES27713.1| ompA family protein [Burkholderia pseudomallei 1106b]
Length = 254
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 55/157 (35%), Gaps = 18/157 (11%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSS---------YSIRPADI 66
+ I + + ++ + + V T + I
Sbjct: 96 SACRDIAARYADAAGLGVIAVAPCNPSDVAAPLPERVELPTDTLFAFDKGGFEDISADGR 155
Query: 67 QVLSNLGSWLEKHDCDF---LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
+ L +L + ++ ++ G+ D LGS + L RA V +Y +A GI A+++
Sbjct: 156 RQLGDLVASIKAKILSINHLIVTGYTDRLGSDEHNARLSSERARTVADYMIAEGIPAAKI 215
Query: 124 KVTSYGKEMPSVYGHDED------AYAKNRRAIVFLK 154
G P V ++ + KNRR + +K
Sbjct: 216 TAVGRGAADPVVVCNNGEQPELIRCLQKNRRVEIRIK 252
>gi|108809572|ref|YP_653488.1| hypothetical protein YPA_3581 [Yersinia pestis Antiqua]
gi|108810554|ref|YP_646321.1| OmpA-family membrane protein [Yersinia pestis Nepal516]
gi|150260448|ref|ZP_01917176.1| putative OmpA-family membrane protein [Yersinia pestis CA88-4125]
gi|165928091|ref|ZP_02223923.1| OmpA domain protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165937799|ref|ZP_02226360.1| OmpA domain protein [Yersinia pestis biovar Orientalis str. IP275]
gi|166008916|ref|ZP_02229814.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166211978|ref|ZP_02238013.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|167401306|ref|ZP_02306806.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167421902|ref|ZP_02313655.1| OmpA domain protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167426473|ref|ZP_02318226.1| OmpA domain protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|167467268|ref|ZP_02331972.1| hypothetical protein YpesF_05092 [Yersinia pestis FV-1]
gi|218927713|ref|YP_002345588.1| hypothetical protein YPO0514 [Yersinia pestis CO92]
gi|229836901|ref|ZP_04457066.1| putative OmpA-family membrane protein [Yersinia pestis Pestoides A]
gi|229840403|ref|ZP_04460562.1| putative OmpA-family membrane protein [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229842483|ref|ZP_04462638.1| putative OmpA-family membrane protein [Yersinia pestis biovar
Orientalis str. India 195]
gi|229900741|ref|ZP_04515865.1| putative OmpA-family membrane protein [Yersinia pestis Nepal516]
gi|270487887|ref|ZP_06204961.1| OmpA family protein [Yersinia pestis KIM D27]
gi|294502609|ref|YP_003566671.1| hypothetical protein YPZ3_0499 [Yersinia pestis Z176003]
gi|108774202|gb|ABG16721.1| OmpA-family membrane protein [Yersinia pestis Nepal516]
gi|108781485|gb|ABG15543.1| putative OmpA-family membrane protein [Yersinia pestis Antiqua]
gi|115346324|emb|CAL19195.1| putative OmpA-family membrane protein [Yersinia pestis CO92]
gi|149289856|gb|EDM39933.1| putative OmpA-family membrane protein [Yersinia pestis CA88-4125]
gi|165914211|gb|EDR32827.1| OmpA domain protein [Yersinia pestis biovar Orientalis str. IP275]
gi|165919952|gb|EDR37253.1| OmpA domain protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165992255|gb|EDR44556.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166206724|gb|EDR51204.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|166960039|gb|EDR56060.1| OmpA domain protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167049331|gb|EDR60739.1| OmpA domain protein [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167054571|gb|EDR64379.1| OmpA domain protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229682080|gb|EEO78172.1| putative OmpA-family membrane protein [Yersinia pestis Nepal516]
gi|229690793|gb|EEO82847.1| putative OmpA-family membrane protein [Yersinia pestis biovar
Orientalis str. India 195]
gi|229696769|gb|EEO86816.1| putative OmpA-family membrane protein [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229705844|gb|EEO91853.1| putative OmpA-family membrane protein [Yersinia pestis Pestoides A]
gi|262360640|gb|ACY57361.1| hypothetical protein YPD4_0452 [Yersinia pestis D106004]
gi|270336391|gb|EFA47168.1| OmpA family protein [Yersinia pestis KIM D27]
gi|294353068|gb|ADE63409.1| hypothetical protein YPZ3_0499 [Yersinia pestis Z176003]
Length = 536
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 36/121 (29%), Gaps = 10/121 (8%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPAD--IQVLSNLGSWLEKHDCDFLIEGHADELG----S 94
+ F T ++ + + LG L D + GH D S
Sbjct: 385 PRGWLLIFTSDGAFRTGEATLSEEFINKKNIERLGLALAPWPGDIEVIGHTDNKPFRSTS 444
Query: 95 RNSSIALGLRRAYAVFNYFVA----RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
N+++ L RA V + + G+ P E+ +NRR
Sbjct: 445 GNNNLKLSAARASVVADKLRESTQINETHQREISAIGRGESDPLADNATEEGRKRNRRVD 504
Query: 151 V 151
+
Sbjct: 505 I 505
>gi|311103960|ref|YP_003976813.1| peptidoglycan-associated lipoprotein [Achromobacter xylosoxidans
A8]
gi|310758649|gb|ADP14098.1| peptidoglycan-associated lipoprotein [Achromobacter xylosoxidans
A8]
Length = 166
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
SV+FD SY++ ++ + IEG+ DE G ++ALG RRA
Sbjct: 59 QRSVYFDFDSYTVSDQYRSLVETHAKYLASHQQQTIKIEGNTDERGGAEYNLALGQRRAD 118
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
AV G+S ++++ S+GKE P G E +A+NRRA + +
Sbjct: 119 AVRRMMTLLGVSDNQIETISFGKEKPKSTGTSEADFAENRRADIVYR 165
>gi|299145363|ref|ZP_07038431.1| lipoprotein PG3 [Bacteroides sp. 3_1_23]
gi|298515854|gb|EFI39735.1| lipoprotein PG3 [Bacteroides sp. 3_1_23]
Length = 238
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 52/143 (36%), Gaps = 11/143 (7%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW--LE 77
+ + +++ + + + F T + ++ A LS + +
Sbjct: 79 AAAEAKQIEGAQVEQITDNNGLQAVKVTFDSGILFTTGNANLSAAAKSALSKFANNVLNQ 138
Query: 78 KHDCDFLIEGHADEL--------GSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSY 128
D D I G+ D S+ ++ L RA +V +Y ++ G+S +++ V
Sbjct: 139 NRDMDVSIYGYTDNQGWKNSTAAQSQQKNLNLSQERAQSVSSYLLSCGVSTNQIKSVQGM 198
Query: 129 GKEMPSVYGHDEDAYAKNRRAIV 151
G+ P +NRR V
Sbjct: 199 GESDPVASNDTAAGREQNRRVEV 221
>gi|260425871|ref|ZP_05779850.1| OmpA family protein [Citreicella sp. SE45]
gi|260420363|gb|EEX13614.1| OmpA family protein [Citreicella sp. SE45]
Length = 203
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 41/105 (39%), Gaps = 4/105 (3%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
++ +F T SY+I P + + F+I GH D S + L RA
Sbjct: 99 TLNSDQYFATDSYAISPQGQARIRE--FFRNATAFGFIITGHTDARASDAYNRRLSYNRA 156
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+V AR A + V YG+ P + A+NRR +
Sbjct: 157 NSVARV--ARSAGARIVDVRGYGESYPVATNSTAEGMARNRRVEI 199
>gi|150024175|ref|YP_001295001.1| flagellar motor/chemotaxis (MotB)-related protein [Flavobacterium
psychrophilum JIP02/86]
gi|149770716|emb|CAL42180.1| Flagellar motor/Chemotaxis (MotB)-related protein [Flavobacterium
psychrophilum JIP02/86]
Length = 320
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 44/130 (33%), Gaps = 8/130 (6%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSS-YSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
L + S+ + + F++ S V++ + D LIEGH D
Sbjct: 177 GKGLTVQQKDGKVYVSMENKLLFESGSWAVGTEGKKAVVAVAKVLGDNPDISILIEGHTD 236
Query: 91 ELGS------RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAY 143
++ L +RA ++ N + + G+ P + +
Sbjct: 237 NDKFAGAVGQIENNWDLSTKRATSIVNILGENPKVNKQNLTAAGRGEFSPLMSNDTPEGK 296
Query: 144 AKNRRAIVFL 153
AKNRR + L
Sbjct: 297 AKNRRIEIIL 306
>gi|114766590|ref|ZP_01445546.1| OmpA family protein [Pelagibaca bermudensis HTCC2601]
gi|114541206|gb|EAU44258.1| OmpA family protein [Roseovarius sp. HTCC2601]
Length = 194
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 42/105 (40%), Gaps = 4/105 (3%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
++ +F T Y I P L + F+I GH D S + L RA
Sbjct: 90 TLNTDQYFATDKYYISPKGKARLEE--FFNSATAFGFIIAGHTDARASIEYNRRLSYNRA 147
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
AV + ARG A + V YG+E P + AKNRR +
Sbjct: 148 NAVASV--ARGTGARIIDVRGYGEEYPVATNRTVEGMAKNRRVEI 190
>gi|46202032|ref|ZP_00053894.2| COG1360: Flagellar motor protein [Magnetospirillum magnetotacticum
MS-1]
Length = 274
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 44/122 (36%), Gaps = 12/122 (9%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG--------SWLEKHDCDFLIEGHADELG 93
E + F T S + P ++ + L + + + I+GH D
Sbjct: 148 EGDRFIFQSELLFATGSADLGPEGVEQVGRLAATLKDIAKTMPKGVNWVLRIDGHTDRRP 207
Query: 94 S----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
S+ L RA V A G+ R+ +G+ P +E AYAKNRR
Sbjct: 208 MVSGRYPSNWELSTARAITVLRTLAANGVPKDRLAAAGFGEFQPVDPADNEAAYAKNRRI 267
Query: 150 IV 151
+
Sbjct: 268 EI 269
>gi|89053531|ref|YP_508982.1| hypothetical protein Jann_1040 [Jannaschia sp. CCS1]
gi|88863080|gb|ABD53957.1| OmpA/MotB [Jannaschia sp. CCS1]
Length = 799
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 44/126 (34%), Gaps = 14/126 (11%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG--------SWLEKHDCDFLIEGHADELG 93
E V F+ S + + + N+ E D ++GH D+
Sbjct: 671 EGDRFVFSSEVLFEVGSADLATEGLAQIENVAALLLEIAVDIPEAIDWIIRVDGHTDDQQ 730
Query: 94 -----SRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+ ++ L RA AV Y GI R+ T +G+ P ++ A NR
Sbjct: 731 LREGATYANNWELSQARALAVVLYMSEELGIPPRRLAATGFGEHRPIAPNDTDEGQAANR 790
Query: 148 RAIVFL 153
R + L
Sbjct: 791 RIELKL 796
>gi|221197269|ref|ZP_03570316.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M]
gi|221203942|ref|ZP_03576960.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2]
gi|221176108|gb|EEE08537.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2]
gi|221183823|gb|EEE16223.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M]
Length = 214
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 53/142 (37%), Gaps = 10/142 (7%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS----NLGSW 75
+ + + + ++ F +S ++P ++L L ++
Sbjct: 58 AQQRKTLEQALAGPLAAGRVTLVNGRIGIAGNLLFALNSDQLQPDGRELLKTLAGPLAAY 117
Query: 76 LEKHDCDFLIEGHADELG------SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
L+ D ++ G AD+ + L +RA V + G+ AS + ++G
Sbjct: 118 LKTRDQILMVSGFADDQQVRAGNRMFADNWELSAKRALTVTRALIDEGVPASSVFAAAFG 177
Query: 130 KEMPSVYGHDEDAYAKNRRAIV 151
E P D++ AKNRR +
Sbjct: 178 SEQPVSSNADDEGRAKNRRVEI 199
>gi|162418688|ref|YP_001607328.1| hypothetical protein YpAngola_A2952 [Yersinia pestis Angola]
gi|162351503|gb|ABX85451.1| OmpA domain protein [Yersinia pestis Angola]
Length = 535
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 36/121 (29%), Gaps = 10/121 (8%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPAD--IQVLSNLGSWLEKHDCDFLIEGHADELG----S 94
+ F T ++ + + LG L D + GH D S
Sbjct: 384 PRGWLLIFTSDGAFRTGEATLSEEFINKKNIERLGLALAPWPGDIEVIGHTDNKPFRSTS 443
Query: 95 RNSSIALGLRRAYAVFNYFVA----RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
N+++ L RA V + + G+ P E+ +NRR
Sbjct: 444 GNNNLKLSAARASVVADKLRESTQINETHQREISAIGRGESDPLADNATEEGRKRNRRVD 503
Query: 151 V 151
+
Sbjct: 504 I 504
>gi|51595006|ref|YP_069197.1| hypothetical protein YPTB0655 [Yersinia pseudotuberculosis IP
32953]
gi|153950101|ref|YP_001402377.1| hypothetical protein YpsIP31758_3422 [Yersinia pseudotuberculosis
IP 31758]
gi|186894007|ref|YP_001871119.1| hypothetical protein YPTS_0678 [Yersinia pseudotuberculosis PB1/+]
gi|51588288|emb|CAH19895.1| putative OmpA-family membrane protein [Yersinia pseudotuberculosis
IP 32953]
gi|152961596|gb|ABS49057.1| OmpA domain protein [Yersinia pseudotuberculosis IP 31758]
gi|186697033|gb|ACC87662.1| type IV / VI secretion system protein, DotU family [Yersinia
pseudotuberculosis PB1/+]
Length = 536
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 36/121 (29%), Gaps = 10/121 (8%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPAD--IQVLSNLGSWLEKHDCDFLIEGHADELG----S 94
+ F T ++ + + LG L D + GH D S
Sbjct: 385 PRGWLLIFTSDGAFRTGEATLSEEFINKKNIERLGLALAPWPGDIEVIGHTDNKPFRSTS 444
Query: 95 RNSSIALGLRRAYAVFNYFVA----RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
N+++ L RA V + + G+ P E+ +NRR
Sbjct: 445 GNNNLKLSAARASVVADKLRESTQINETHQREISAIGRGESDPLADNATEEGRKRNRRVD 504
Query: 151 V 151
+
Sbjct: 505 I 505
>gi|254260999|ref|ZP_04952053.1| ompA family protein [Burkholderia pseudomallei 1710a]
gi|254219688|gb|EET09072.1| ompA family protein [Burkholderia pseudomallei 1710a]
Length = 254
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 55/157 (35%), Gaps = 18/157 (11%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSS---------YSIRPADI 66
+ I + + ++ + + V T + I
Sbjct: 96 SACRDIAARYADAAGLGVIAVAPCNPSDVAAPLPERVELPTDTLFAFDKGGFEDISADGR 155
Query: 67 QVLSNLGSWLEKHDCDF---LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
+ L +L + ++ ++ G+ D LGS + L RA V +Y +A GI A+++
Sbjct: 156 RQLGDLVASIKAKILSINHLVVTGYTDRLGSDEHNARLSSERARTVADYMIAEGIPAAKI 215
Query: 124 KVTSYGKEMPSVYGHDED------AYAKNRRAIVFLK 154
G P V ++ + KNRR + +K
Sbjct: 216 TAVGRGAADPVVVCNNGEQPELIRCLQKNRRVEIRIK 252
>gi|76812099|ref|YP_333598.1| ompA family protein [Burkholderia pseudomallei 1710b]
gi|76581552|gb|ABA51027.1| ompA family protein [Burkholderia pseudomallei 1710b]
Length = 290
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 55/157 (35%), Gaps = 18/157 (11%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSS---------YSIRPADI 66
+ I + + ++ + + V T + I
Sbjct: 132 SACRDIAARYADAAGLGVIAVAPCNPSDVAAPLPERVELPTDTLFAFDKGGFEDISADGR 191
Query: 67 QVLSNLGSWLEKHDCDF---LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
+ L +L + ++ ++ G+ D LGS + L RA V +Y +A GI A+++
Sbjct: 192 RQLGDLVASIKAKILSINHLVVTGYTDRLGSDEHNARLSSERARTVADYMIAEGIPAAKI 251
Query: 124 KVTSYGKEMPSVYGHDED------AYAKNRRAIVFLK 154
G P V ++ + KNRR + +K
Sbjct: 252 TAVGRGAADPVVVCNNGEQPELIRCLQKNRRVEIRIK 288
>gi|269964170|ref|ZP_06178467.1| outer membrane protein, putative [Vibrio harveyi 1DA3]
gi|269831125|gb|EEZ85287.1| outer membrane protein, putative [Vibrio harveyi 1DA3]
Length = 205
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 72/189 (38%), Gaps = 31/189 (16%)
Query: 1 MQYST-IFIILSAITMMSISGIDNLD-----------------------------TKISS 30
M+ +T IF+ LS +++ S D D
Sbjct: 1 MKNNTLIFLALSTMSLNSAFATDKFDYIPTPEHIQVADLHDVDNDGVINARDLCANTPVG 60
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHA 89
+ + + F S SI P + ++ L ++L+K+ I+G+A
Sbjct: 61 AEVDNDGCETYLNKEEQYQLKILFANDSDSINPVFQRKITELAAFLKKYPATSIEIQGYA 120
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
++G+ ++ L RRA V N + +GIS R+ + +G G D+ ++A NRR
Sbjct: 121 SKVGTAAYNLELSRRRASNVRNLLIKQGISEKRLTIVGFGDTHLVQLGTDDVSHALNRRV 180
Query: 150 IVFLKGCRA 158
+ G +
Sbjct: 181 TATVIGHKG 189
>gi|226197157|ref|ZP_03792734.1| ompA family protein [Burkholderia pseudomallei Pakistan 9]
gi|225930536|gb|EEH26546.1| ompA family protein [Burkholderia pseudomallei Pakistan 9]
Length = 254
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 55/157 (35%), Gaps = 18/157 (11%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSS---------YSIRPADI 66
+ I + + ++ + + V T + I
Sbjct: 96 SACRDIAARYADAAGLGVIAVAPCNPSDVAAPLPERVELPTDTLFAFDKGGFEDISADGR 155
Query: 67 QVLSNLGSWLEKHDCDF---LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
+ L +L + ++ ++ G+ D LGS + L RA V +Y +A GI A+++
Sbjct: 156 RQLGDLVASIKAKIFSINHLIVTGYTDRLGSDEHNARLSSERARTVADYMIAEGIPAAKI 215
Query: 124 KVTSYGKEMPSVYGHDED------AYAKNRRAIVFLK 154
G P V ++ + KNRR + +K
Sbjct: 216 TAVGRGAADPVVVCNNGEQPELIRCLQKNRRVEIRIK 252
>gi|167845593|ref|ZP_02471101.1| ompA family protein [Burkholderia pseudomallei B7210]
Length = 277
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 58/156 (37%), Gaps = 24/156 (15%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSS---YSIRPADIQ 67
+ + +++++ + D P+ V + F I +
Sbjct: 132 AGLGVIAVASCNPSDVAAPLPERV------------ELPTDTLFAFDKGGFEDISADGRR 179
Query: 68 VLSNLGSWLEKHDCDF---LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
L +L + ++ ++ G+ D LGS + L RA V +Y +A GI A+++
Sbjct: 180 QLGDLVASIKAKILSINHLVVTGYTDRLGSDEHNARLSSERARTVADYMIAEGIPAAKIT 239
Query: 125 VTSYGKEMPSVYGHDED------AYAKNRRAIVFLK 154
G P V ++ + KNRR + +K
Sbjct: 240 AVGRGAADPVVVCNNGEQPELIRCLQKNRRVEIRIK 275
>gi|167824061|ref|ZP_02455532.1| hypothetical protein Bpseu9_10300 [Burkholderia pseudomallei 9]
Length = 290
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 55/157 (35%), Gaps = 18/157 (11%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSS---------YSIRPADI 66
+ I + + ++ + + V T + I
Sbjct: 132 SACRDIAARYADAAGLGVIAVAPCNPSDVAAPLPERVELPTDTLFAFDKGGFEDISADGR 191
Query: 67 QVLSNLGSWLEKHDCDF---LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
+ L +L + ++ ++ G+ D LGS + L RA V +Y +A GI A+++
Sbjct: 192 RQLGDLVASIKAKIFSINHLIVTGYTDRLGSDEHNARLSSERARTVADYMIAEGIPAAKI 251
Query: 124 KVTSYGKEMPSVYGHDED------AYAKNRRAIVFLK 154
G P V ++ + KNRR + +K
Sbjct: 252 TAVGRGAADPVVVCNNGEQPELIRCLQKNRRVEIRIK 288
>gi|124004158|ref|ZP_01689004.1| immunogenic 75 kDa protein PG4 [Microscilla marina ATCC 23134]
gi|123990228|gb|EAY29727.1| immunogenic 75 kDa protein PG4 [Microscilla marina ATCC 23134]
Length = 660
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 47/115 (40%), Gaps = 3/115 (2%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSN--LGSWLEKHDCDFLIEGHADELGSRNSSIAL 101
+F+D + + IRP + L L + H D G+ +++ L
Sbjct: 542 LGYEFEAIIFYDFARWEIRPDAAKELDERVLTFLKNNPKLIVELGSHTDARGTDQNNLIL 601
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMP-SVYGHDEDAYAKNRRAIVFLKG 155
+RA + +Y +++GI R+K YG+ E+ + NRR V + G
Sbjct: 602 SQKRAKSAVDYLISKGIDPDRIKAKGYGETDLKIKEAKTEEEHQANRRTTVKVLG 656
>gi|255036139|ref|YP_003086760.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
18053]
gi|254948895|gb|ACT93595.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
Length = 295
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 45/114 (39%), Gaps = 6/114 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNS----SIA 100
S+ D + F + S I A VLS + L + + LIEGH D + +
Sbjct: 165 VSLSDKMLFRSGSSVINSAADNVLSKVAKILNDYKEIEILIEGHTDNVPIATDKVADNWD 224
Query: 101 LGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L + RA AV + + RM G+ +P V + NRR + +
Sbjct: 225 LSVLRATAVARTLQKKYGVEPVRMIAGGRGEYLPKVANDSAPNRSLNRRTEIII 278
>gi|254487047|ref|ZP_05100252.1| OmpA family protein [Roseobacter sp. GAI101]
gi|214043916|gb|EEB84554.1| OmpA family protein [Roseobacter sp. GAI101]
Length = 191
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 41/100 (41%), Gaps = 4/100 (4%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FF T SY I P L+ + ++I GH D S ++ L L RA +V
Sbjct: 93 FFKTDSYRIHPQGKARLAE--FFKSTGAVSYIISGHTDSRASDAYNMKLSLNRANSVAAI 150
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
A+ A V YG+ +P+ AKNRR +
Sbjct: 151 --AQQSGARIADVRGYGERIPAASNSTAAGMAKNRRVEII 188
>gi|99081935|ref|YP_614089.1| hypothetical protein TM1040_2095 [Ruegeria sp. TM1040]
gi|99038215|gb|ABF64827.1| flagellar motor protein-like protein [Ruegeria sp. TM1040]
Length = 784
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 41/126 (32%), Gaps = 14/126 (11%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK--------HDCDFLIEGHADELG 93
E V F S + A ++ + L+ + ++GH D
Sbjct: 656 EGDRFVFASEVLFALGSAELSEAGKAEIAKVARILQNVAAAIPDDINWIIRVDGHTDNQR 715
Query: 94 S-----RNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+ L RA +V Y GI R+ +G+ P +A A+NR
Sbjct: 716 FVGAGKYADNWELSQGRALSVVRYMIDELGIPPGRLAANGFGEFQPVNPADTPEARAQNR 775
Query: 148 RAIVFL 153
R + L
Sbjct: 776 RIELKL 781
>gi|320354494|ref|YP_004195833.1| OmpA/MotB domain-containing protein [Desulfobulbus propionicus DSM
2032]
gi|320122996|gb|ADW18542.1| OmpA/MotB domain protein [Desulfobulbus propionicus DSM 2032]
Length = 365
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 40/126 (31%), Gaps = 5/126 (3%)
Query: 34 VLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG 93
E + + + F + + + L + + ++ + GH D+
Sbjct: 225 ASVELVPDKTMRIILTGDLLFASGQAELTREALVSLKKISALIKTTPYMINVIGHTDDRP 284
Query: 94 ----SRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
S+ L L RA V + + ++ V+ Y P ED NRR
Sbjct: 285 VKNARFPSNWELSLARAGRVARFLIEDTGLPATQFSVSGYSSFRPLKPNTSEDNRKINRR 344
Query: 149 AIVFLK 154
+ L
Sbjct: 345 VELVLS 350
>gi|315634557|ref|ZP_07889842.1| outer membrane protein P5 [Aggregatibacter segnis ATCC 33393]
gi|315476784|gb|EFU67531.1| outer membrane protein P5 [Aggregatibacter segnis ATCC 33393]
Length = 354
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 50/121 (41%), Gaps = 10/121 (8%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRR 105
++ V F ++P VL + + + + + G+ D +GS + L +R
Sbjct: 234 NLNSDVTFAFGKADLKPQAQGVLDGIYGEIAQVKSANVKVAGYTDRIGSDAYNQKLSQKR 293
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE---------DAYAKNRRAIVFLKGC 156
A V NY VA+G+S + + T YGK P + A +RR + + G
Sbjct: 294 AETVANYLVAKGVSQNAISATGYGKANPVTGNKCDAVKGRKALIACLADDRRVEIAVSGT 353
Query: 157 R 157
+
Sbjct: 354 K 354
>gi|212634650|ref|YP_002311175.1| OmpA protein [Shewanella piezotolerans WP3]
gi|212556134|gb|ACJ28588.1| OmpA [Shewanella piezotolerans WP3]
Length = 325
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Query: 54 FDTSSYSIRPADIQVLSNLGSW--LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
+++ + ++ + + +++ LI+ + D G R+++ + ++RA +V
Sbjct: 220 YESGGTELTRYAKAQINKVQEYLAYDQNVDLVLIDAYTDSYGGRSANERVSVQRADSVKE 279
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
FVA GI SR+ +G+ D A+NRR ++ +
Sbjct: 280 LFVASGIPQSRIHTMGHGERRHVASNKTIDERARNRRVVIRIS 322
>gi|209886430|ref|YP_002290287.1| flagellar motor protein [Oligotropha carboxidovorans OM5]
gi|209874626|gb|ACI94422.1| flagellar motor protein [Oligotropha carboxidovorans OM5]
Length = 337
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 12/118 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIEGHAD----ELGSR 95
VFFD+ S + P L L + + + + ++GH D
Sbjct: 217 FQSEVFFDSGSSGLLPEGRGELDQLATAITELEKKIPAEIPWVLRVDGHTDVRPINSPQF 276
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA +V Y ++RG+S R+ +G+ P +DAY +NRR + L
Sbjct: 277 KSNWDLSAARAISVVQYLISRGVSPQRLVAAGFGEFQPLDTATTDDAYKRNRRIELKL 334
>gi|160885976|ref|ZP_02066979.1| hypothetical protein BACOVA_03981 [Bacteroides ovatus ATCC 8483]
gi|260170568|ref|ZP_05756980.1| OmpA family outer membrane protein [Bacteroides sp. D2]
gi|315918915|ref|ZP_07915155.1| outer membrane protein [Bacteroides sp. D2]
gi|156108789|gb|EDO10534.1| hypothetical protein BACOVA_03981 [Bacteroides ovatus ATCC 8483]
gi|313692790|gb|EFS29625.1| outer membrane protein [Bacteroides sp. D2]
Length = 238
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 53/143 (37%), Gaps = 11/143 (7%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW--LE 77
+ + +++ + + + F T + ++ A LS + +
Sbjct: 79 AAAEAKQIEGAQVEQITDNNGLQAVKVTFDSGILFTTGNANLSAAAKSALSKFANNVLNQ 138
Query: 78 KHDCDFLIEGHADEL--------GSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSY 128
D D I G+ D S+ ++ L RA +V +Y ++ G+S +++K V
Sbjct: 139 NRDMDVSIYGYTDNQGWKNSTAAQSQQKNLNLSQERAQSVSSYLLSCGVSTNQIKGVQGM 198
Query: 129 GKEMPSVYGHDEDAYAKNRRAIV 151
G+ P +NRR V
Sbjct: 199 GESDPVASNDTAAGREQNRRVEV 221
>gi|49182350|gb|AAT57677.1| OmpA [Pasteurella multocida]
Length = 351
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 10/121 (8%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRR 105
++ V F ++PA VL + + + + G+ D LGS ++ L RR
Sbjct: 231 TLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSASVAVAGYTDRLGSDAYNLKLSQRR 290
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLKGC 156
A V NY VA+G++ + + T +G+ P A +RR + +KG
Sbjct: 291 ADTVANYLVAKGVAQNAISATGHGEANPVTGNKCDSVKGRKALIACLADDRRVEIAVKGN 350
Query: 157 R 157
+
Sbjct: 351 K 351
>gi|39933998|ref|NP_946274.1| hypothetical protein RPA0921 [Rhodopseudomonas palustris CGA009]
gi|192289418|ref|YP_001990023.1| hypothetical protein Rpal_0991 [Rhodopseudomonas palustris TIE-1]
gi|39647845|emb|CAE26365.1| possible flagellar motor protein MotB [Rhodopseudomonas palustris
CGA009]
gi|192283167|gb|ACE99547.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1]
Length = 341
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 11/117 (9%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--------FLIEGHADELG---SRN 96
VFFDT + P L + L++ D ++GH D+ S
Sbjct: 222 FQSEVFFDTGQALLLPEGRAELDKVADALKELDKKIPAELPWVVRVDGHTDKRPITGSFK 281
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA +V Y ++RG+ A R+ + + P +DAY +NRR + L
Sbjct: 282 SNWELSSARAISVVQYLMSRGVPAQRLVAAGFAEFQPLDTADTDDAYKRNRRIELKL 338
>gi|313683568|ref|YP_004061306.1| ompa/motb domain protein [Sulfuricurvum kujiense DSM 16994]
gi|313156428|gb|ADR35106.1| OmpA/MotB domain protein [Sulfuricurvum kujiense DSM 16994]
Length = 412
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 45/138 (32%), Gaps = 9/138 (6%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSS---YSIRPADIQVLSNLGSWLEKHDC 81
+ + E + E + + F S ++ +
Sbjct: 274 EKPVVVVAKPATEKPVVEAAAPAPYFRNFQIFESRVVALSEVGKERLREWAQLFKAGGYK 333
Query: 82 DFLIEGHADELGSRN------SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
I G+ D + + ++ L RA V +Y V+ G+ +S +KV G P
Sbjct: 334 SVTINGYTDNIPPQRLKALYATNAILSEARAQMVADYLVSIGVDSSAIKVNGRGDVDPVA 393
Query: 136 YGHDEDAYAKNRRAIVFL 153
E+ +KNRR L
Sbjct: 394 PNETEEGRSKNRRIEFIL 411
>gi|83749427|ref|ZP_00946420.1| Chemotaxis motB protein [Ralstonia solanacearum UW551]
gi|207738949|ref|YP_002257342.1| outer membrane protein [Ralstonia solanacearum IPO1609]
gi|83723907|gb|EAP71092.1| Chemotaxis motB protein [Ralstonia solanacearum UW551]
gi|206592320|emb|CAQ59226.1| outer membrane protein [Ralstonia solanacearum IPO1609]
Length = 215
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 47/116 (40%), Gaps = 10/116 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD----FLIEGHADELGSRN----- 96
+ SV F +S ++P ++L +L L + ++ G AD+
Sbjct: 85 IGISGSVLFALNSDQLQPEGRELLKSLAGPLSAYLRSRDEILMVSGFADDQQVHAGNRRF 144
Query: 97 -SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ L +RA V + GI + + ++G E P D++ AKNRR +
Sbjct: 145 ADNWELSAKRALTVTRALIDAGIPGASVFAAAFGSEQPVSSNADDEGRAKNRRVEI 200
>gi|254491010|ref|ZP_05104191.1| OmpA family protein [Methylophaga thiooxidans DMS010]
gi|224463523|gb|EEF79791.1| OmpA family protein [Methylophaga thiooxydans DMS010]
Length = 263
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 53/134 (39%), Gaps = 5/134 (3%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD 82
+ + +L+ L ++ + + F + ++ A + VLS + L + D
Sbjct: 123 TKKFSTAINNDLLSLEQLPDRIMIRINEKTSFTSGGAKLKTAFLPVLSLIAETLAELDDT 182
Query: 83 FLIEGHADELG----SRNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYG 137
F++ GH+D + + S+ L RA +V + + S+ ++ +Y P
Sbjct: 183 FIVSGHSDNVPLRSGNYRSNWELSGARATSVVHALLRHPKLVPSQFRIEAYADTQPVESN 242
Query: 138 HDEDAYAKNRRAIV 151
A NRR +
Sbjct: 243 DTAAGRATNRRVEI 256
>gi|300722575|ref|YP_003711865.1| outer membrane protein 3a [Xenorhabdus nematophila ATCC 19061]
gi|218157851|gb|ACK58677.1| OpnT [Xenorhabdus nematophila]
gi|297629082|emb|CBJ89667.1| outer membrane protein 3a (II*;G;d) [Xenorhabdus nematophila ATCC
19061]
Length = 369
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/130 (25%), Positives = 64/130 (49%), Gaps = 12/130 (9%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDCDFLIEGHADELGSRN 96
E S ++ V F+ + +++P Q L NL + ++ + ++ G+ D +GS+N
Sbjct: 230 TVENKSFTLRSDVLFNFNKSTLKPEGQQELDNLYNQLAKIDPTQGNVVVIGYTDRIGSQN 289
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNR 147
++ L +RA +V +Y VA+GI A+ ++ GKE P + A +R
Sbjct: 290 FNLPLSHKRAQSVVDYLVAKGIPANSIQAEGRGKESPVTGSTCDNIKVRTKLIDCLAPDR 349
Query: 148 RAIVFLKGCR 157
R I+ ++G +
Sbjct: 350 RVIINIQGTK 359
>gi|157373221|ref|YP_001471821.1| hypothetical protein Ssed_0080 [Shewanella sediminis HAW-EB3]
gi|157315595|gb|ABV34693.1| conserved hypothetical protein [Shewanella sediminis HAW-EB3]
Length = 304
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 50/123 (40%), Gaps = 2/123 (1%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNS 97
L + FS + F++ + + A L + +++ + L++ HAD G +
Sbjct: 169 LPKPFSYVRRVDIQFESGTSKLTAAHEVDLEAIAQYVQADATVKEILVDAHADASGEHLA 228
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
++ L RA V + GI +++V +G P V + + NRR + L
Sbjct: 229 NLVLSKERADEVASRLFELGIQKQKIQVRHHGARSPIVSNNSPEGREINRRVTIRLIKSH 288
Query: 158 ANT 160
T
Sbjct: 289 TKT 291
>gi|319953135|ref|YP_004164402.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
gi|319421795|gb|ADV48904.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
Length = 683
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 52/121 (42%), Gaps = 7/121 (5%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADELGSRNSS 98
+++ D ++F+ IR + L+ L + ++ + IE H D G+ + +
Sbjct: 560 VEDGIRKLKTDMIYFNFDKSFIREDASKELNKLVEVMSEYPEMVIKIESHTDSRGASDYN 619
Query: 99 IALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGH-----DEDAYAKNRRAIVF 152
L +RA + +Y +++GI A R+ YG++ + + NRR+
Sbjct: 620 RYLSDKRAKSSRDYIISQGIDADRIESAIGYGEDRLLNDCDGSVKCTREKHELNRRSEFI 679
Query: 153 L 153
+
Sbjct: 680 I 680
>gi|45758057|gb|AAO85787.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
Length = 372
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 53/143 (37%), Gaps = 12/143 (8%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK---HDCDFLIE 86
E+ + + V FD S++PA L + + + +
Sbjct: 229 GQGAAPVEAPEVVTKNFAFSSDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLSIQVN 288
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV--YGHDEDAY- 143
G+ D +G S++ L RRA V NY V++G + + + YG+ P
Sbjct: 289 GYTDRIGKEASNLKLSQRRAETVANYIVSKGTNPANVTAVGYGEANPVTGHTCDAVKGRK 348
Query: 144 ------AKNRRAIVFLKGCRANT 160
A +RR + ++G + T
Sbjct: 349 ALIACLAPDRRVEIQVQGSKEVT 371
>gi|319954323|ref|YP_004165590.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
gi|319422983|gb|ADV50092.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
Length = 639
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 6/109 (5%)
Query: 51 SVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
++FF+T+S + L + E + + H+D S ++ L RRA +
Sbjct: 528 TIFFNTNSSYLNANAYPELDKVVAYMKEFPNARVEVGSHSDSRDSDRYNLWLSDRRAKST 587
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHD-----EDAYAKNRRAIVFL 153
+Y V+ GIS R+ T YG+ + + E +A NRR+ +
Sbjct: 588 VSYIVSMGISEDRITATGYGETLLVNKCINDAPCSEAEHALNRRSEFIV 636
>gi|163788754|ref|ZP_02183199.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Flavobacteriales bacterium ALC-1]
gi|159875991|gb|EDP70050.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Flavobacteriales bacterium ALC-1]
Length = 636
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 7/118 (5%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADELGSRNSSIAL 101
FS V + +FFD IR L N+ + +H + IE H D G ++ L
Sbjct: 514 DFSQIVINPIFFDFDKSKIRTDAQYELENIVDVMRRHKSMIIKIESHTDSRGRDKYNLKL 573
Query: 102 GLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGH-----DEDAYAKNRRAIVFL 153
RRA + +Y ++RG+ A+R+ YG+ E+ + NRR+ ++
Sbjct: 574 SDRRAKSTRDYLISRGVEANRIESAIGYGETQLLNNCGNRVKCTEEEHQVNRRSYFYI 631
>gi|71282150|ref|YP_271418.1| ompA family protein [Colwellia psychrerythraea 34H]
gi|71147890|gb|AAZ28363.1| ompA family protein [Colwellia psychrerythraea 34H]
Length = 367
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 55/140 (39%), Gaps = 2/140 (1%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
DN ++ ++ + +V + FD++ ++ ++ + ++E +
Sbjct: 222 SKDNCANTPATDKVNEVGCTVFTEAQDTVELLINFDSNKAVVKEKYKPIMVKVAKFMEAY 281
Query: 80 D-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYG 137
I+GH+ GS + L +RA AV + + + ASR+ YG+
Sbjct: 282 PDLSLTIKGHSSAKGSAAYNQTLSAKRAQAVVDVLINDFGVDASRLNSIGYGESELLNTD 341
Query: 138 HDEDAYAKNRRAIVFLKGCR 157
+ A+ +NRR +
Sbjct: 342 NTAAAHEQNRRIEATISTTN 361
>gi|129141|sp|P04845|OMPA_SERMA RecName: Full=Outer membrane protein A; Flags: Precursor
gi|758300|emb|CAA25254.1| ompA protein [Serratia marcescens]
Length = 359
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 53/125 (42%), Gaps = 14/125 (11%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++ Q L L + ++ D ++ G+ D +GS + L
Sbjct: 227 TLKSDVLFNFNKSTLKAEGQQALDQLYTQLSSMDPKDGSVVVLGYTDAVGSDQYNQKLSE 286
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG--------HDED---AYAKNRRAIVF 152
+RA +V +Y V++GI + ++ G+ + A +RR +
Sbjct: 287 QRAQSVVDYLVSKGIPSDKISARGMGEADAVTGNTCGYKSGRATKAQIVCLAPDRRVEIE 346
Query: 153 LKGCR 157
+KG +
Sbjct: 347 VKGIK 351
>gi|297539675|ref|YP_003675444.1| peptidoglycan-associated lipoprotein [Methylotenera sp. 301]
gi|297259022|gb|ADI30867.1| peptidoglycan-associated lipoprotein [Methylotenera sp. 301]
Length = 191
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 61/142 (42%), Gaps = 1/142 (0%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
+ I T + L++ + +V+FD S +++ ++ +
Sbjct: 50 TGADTSAVKEVAIDGNATDSGNNPLKDPNNILSKRNVYFDFDSDAVKAEFRPLIEAHAKY 109
Query: 76 L-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
L +++G+ DE G+R +++LG RR+ AV G+ ++++ S+G+E +
Sbjct: 110 LLAHTSAKVILQGNTDERGTREYNLSLGQRRSVAVKKSLNLLGVQDAQIETVSFGEEKAT 169
Query: 135 VYGHDEDAYAKNRRAIVFLKGC 156
D+ +NRR V +
Sbjct: 170 EGCADDACSKQNRRVDVVYENE 191
>gi|254500358|ref|ZP_05112509.1| OmpA family protein [Labrenzia alexandrii DFL-11]
gi|222436429|gb|EEE43108.1| OmpA family protein [Labrenzia alexandrii DFL-11]
Length = 344
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 45/119 (37%), Gaps = 13/119 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLG--------SWLEKHDCDFLIEGHADELG-----S 94
V FD+ S I P Q L L ++ + ++GH D
Sbjct: 223 FQSEVLFDSGSEDINPEGQQELDKLAEAILELSGQIPDEINWVLRVDGHTDARPLSGTGR 282
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L RA +V Y + +G+ R+ +G+ P DA AKNRR + L
Sbjct: 283 LRNNWELSAARAISVVRYLIEKGVDPKRLVAAGFGEFQPLEESETPDALAKNRRIELKL 341
>gi|86361201|ref|YP_473088.1| outer membrane lipoprotein [Rhizobium etli CFN 42]
gi|86285303|gb|ABC94361.1| probable outer membrane lipoprotein [Rhizobium etli CFN 42]
Length = 178
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 52/133 (39%), Gaps = 1/133 (0%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDC 81
T +P +E F SVG ++F S ++ + L N +W +
Sbjct: 40 TGQTNDPAPGFESVAPGSEEDFILSVGRRIYFKQDSAALDSVAMATLDNQAAWLNKNPTW 99
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
++G AD+ GS L +RA A Y ++G+ RM YG + +
Sbjct: 100 LLKLQGFADDSGSAAQMQTLSQKRADAAMAYLTSKGVDPKRMWAKGYGNDREVRDCTERS 159
Query: 142 AYAKNRRAIVFLK 154
+NRR + L+
Sbjct: 160 CKVQNRRVVTNLR 172
>gi|319763679|ref|YP_004127616.1| ompa/motb domain protein [Alicycliphilus denitrificans BC]
gi|317118240|gb|ADV00729.1| OmpA/MotB domain protein [Alicycliphilus denitrificans BC]
Length = 217
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 48/132 (36%), Gaps = 12/132 (9%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS----NLGSWLEKHDCDFLIE 86
+ + + SV F +S ++P Q+L L ++L + ++
Sbjct: 74 AGPLAAGRVTLQDGRIGISGSVLFAFNSDELQPEGRQLLRSLSAPLAAYLRERGEILMVS 133
Query: 87 GHADELGS--------RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
G D+ + L +RA V + GI ++++ ++G E
Sbjct: 134 GFTDDRPMRGGGGNARFADNWELSAQRALTVTRALIDEGIPSAQVFAAAFGAEQAVASNA 193
Query: 139 DEDAYAKNRRAI 150
D + A+NRR
Sbjct: 194 DAEGRARNRRVE 205
>gi|291612991|ref|YP_003523148.1| peptidoglycan-associated lipoprotein [Sideroxydans lithotrophicus
ES-1]
gi|291583103|gb|ADE10761.1| peptidoglycan-associated lipoprotein [Sideroxydans lithotrophicus
ES-1]
Length = 175
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/171 (19%), Positives = 66/171 (38%), Gaps = 21/171 (12%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISS--------------------PDTVLNESSLQE 42
I + + + +++ + + + E++
Sbjct: 1 MKKIILSIILVNLLAACATEKPKEAATEPTPAATTETTAPATAAAEPAQTSTAAEAAANA 60
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNSSIAL 101
+ + SV+F +++ D + + +EG+ADE GS ++AL
Sbjct: 61 EAAIPEIRSVYFPFDVDAVQDGDRAAIQAHGAYLGKNDSVKVRVEGNADERGSTEYNLAL 120
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
G RRA V V G AS+++ S+G+E P H E +++NRRA +
Sbjct: 121 GQRRANNVKKLLVLSGAKASQVETVSFGEEKPRCADHMESCWSQNRRADIV 171
>gi|167572993|ref|ZP_02365867.1| hypothetical protein BoklC_24368 [Burkholderia oklahomensis C6786]
Length = 215
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 10/116 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLS----NLGSWLEKHDCDFLIEGHADEL------GSR 95
+ SV F +S ++PA +L L ++L+ + ++ G AD+
Sbjct: 85 IGISGSVLFALNSDELQPAGRDLLKSLAGPLAAYLKANREILMVSGFADDQQVRAGNHRF 144
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ L +RA V F+A G+ AS + ++G E P D++ AKNRR +
Sbjct: 145 ADNWELSAKRALTVTRAFIAEGVPASSVFAAAFGSEQPVSPNSDDEGRAKNRRVEI 200
>gi|259416340|ref|ZP_05740260.1| OmpA family protein [Silicibacter sp. TrichCH4B]
gi|259347779|gb|EEW59556.1| OmpA family protein [Silicibacter sp. TrichCH4B]
Length = 784
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 41/120 (34%), Gaps = 14/120 (11%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEK--------HDCDFLIEGHADELGS----- 94
V F S + A ++ + L+ + ++GH D
Sbjct: 662 FASEVLFALGSAELSEAGKTEIAKVARILQNVAAAIPDDINWIIRVDGHTDNQRFSGTGK 721
Query: 95 RNSSIALGLRRAYAVFNYFV-ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA +V Y + GI R+ +G+ P +A A+NRR + L
Sbjct: 722 YADNWELSQGRALSVVRYMMDELGIPPGRLAANGFGEFQPVNPADTPEARAQNRRIELKL 781
>gi|259417968|ref|ZP_05741887.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
gi|259346874|gb|EEW58688.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
Length = 207
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/138 (29%), Positives = 64/138 (46%), Gaps = 4/138 (2%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
G N + L +F++ V ++ FD S + QVL W+ +
Sbjct: 32 GAANENNTAVLSGDRSYRIQLATRFANEVPTTINFDFDSARLDGNARQVLDAQADWIRQF 91
Query: 80 D-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT-SYGKEMPSVYG 137
F + GH D +GS++ + LGLRRA A NY VARGI+ +R++ S+G+ P V
Sbjct: 92 PEVRFRVYGHTDAVGSQSYNKRLGLRRARAAVNYLVARGIARNRLEAVASFGETQPLVLT 151
Query: 138 HDEDAYAKNRRAIVFLKG 155
+ NRR + + G
Sbjct: 152 DQRERR--NRRTVTEVSG 167
>gi|221210851|ref|ZP_03583831.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1]
gi|221169807|gb|EEE02274.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1]
Length = 214
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 53/142 (37%), Gaps = 10/142 (7%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS----NLGSW 75
+ + + + ++ F +S ++P ++L L ++
Sbjct: 58 AQQRKTLEQALAGPLAAGRVTLVNGRIGIAGNLLFALNSDQLQPDGRELLKTLAGPLAAY 117
Query: 76 LEKHDCDFLIEGHADELG------SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
L+ D ++ G AD+ + L +RA V + G+ AS + ++G
Sbjct: 118 LKTRDQILMVSGFADDQQVRAGNRMFADNWELSAKRALTVTRALIDAGVPASSVFAAAFG 177
Query: 130 KEMPSVYGHDEDAYAKNRRAIV 151
E P D++ AKNRR +
Sbjct: 178 SEQPVSSNADDEGRAKNRRVEI 199
>gi|254297563|ref|ZP_04965016.1| ompA family protein [Burkholderia pseudomallei 406e]
gi|157807731|gb|EDO84901.1| ompA family protein [Burkholderia pseudomallei 406e]
Length = 254
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 55/157 (35%), Gaps = 18/157 (11%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSS---------YSIRPADI 66
+ I + + ++ + + V T + I
Sbjct: 96 SACRDIAARYADAAGLGVIAVAPCNPSDVAAPLPERVELPTDTLFAFDKGGFEDISADGR 155
Query: 67 QVLSNLGSWLEKHDCDF---LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
+ L +L + ++ ++ G+ D LGS + L RA V +Y +A GI A+++
Sbjct: 156 RQLGDLVASIKAKILSINHLIVTGYTDRLGSDEHNARLSSERARTVADYMIAEGIPAAKI 215
Query: 124 KVTSYGKEMPSVYGHDED------AYAKNRRAIVFLK 154
G P V ++ + KNRR + +K
Sbjct: 216 TAVGRGAADPVVVCNNGEQPELIRCLQKNRRVEIRIK 252
>gi|153008534|ref|YP_001369749.1| hypothetical protein Oant_1203 [Ochrobactrum anthropi ATCC 49188]
gi|151560422|gb|ABS13920.1| OmpA/MotB domain protein [Ochrobactrum anthropi ATCC 49188]
Length = 343
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 45/119 (37%), Gaps = 13/119 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGS--------WLEKHDCDFLIEGHADELG-----S 94
V F T S I PA + L + + ++GH D +
Sbjct: 222 FQSEVLFPTGSADINPAGQDEMKKLADAVIQLNQEIPDDINWVLRVDGHTDNVPLTGTGR 281
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA AV + +A G+ A+R+ +G+ P DA +KNRR + L
Sbjct: 282 FRDNWELSSARATAVVKFLIANGVPANRLVAAGFGEYQPLDASDTADARSKNRRIELKL 340
>gi|85713237|ref|ZP_01044263.1| Sodium-type flagellar protein motY precursor [Idiomarina baltica
OS145]
gi|85692932|gb|EAQ30904.1| Sodium-type flagellar protein motY precursor [Idiomarina baltica
OS145]
Length = 303
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Query: 57 SSYSIRPADIQVLSNLGSWLEKHD--CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
S + + L + +L+ LI+ + D LG+R + L +RA A+ ++FV
Sbjct: 197 DSDELTAPSQRKLKQISDYLKVDADLKLVLIDSYTDALGAREPNQTLTEQRANAIKSFFV 256
Query: 115 ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RGI A R++ ++G++ P + +E KNRR IV L
Sbjct: 257 ERGIKADRIQTVAHGEDRPIDHNDNEIGRQKNRRVIVQL 295
>gi|258591277|emb|CBE67574.1| OmpA/MotB domain protein precursor [NC10 bacterium 'Dutch
sediment']
Length = 214
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 67/135 (49%), Gaps = 2/135 (1%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+ + + + + + + + D ++FD +IR +++ W +
Sbjct: 77 TAETGAVPEAKIAEAEVGQEAAAAVQARELKD-IYFDFDQSAIRDDSKKLMDENVEWFRQ 135
Query: 79 HDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
H IEGH+DE GS ++ALG RRA A +Y VA GI+A+R+ S+GKE P V G
Sbjct: 136 HSAARVTIEGHSDERGSSEYNLALGERRARAARDYLVAAGIAANRIGTISFGKERPFVSG 195
Query: 138 HDEDAYAKNRRAIVF 152
HDE + NRRA
Sbjct: 196 HDESTWRWNRRAHFV 210
>gi|111223535|ref|YP_714329.1| hypothetical protein FRAAL4134 [Frankia alni ACN14a]
gi|111151067|emb|CAJ62776.1| conserved hypothetical protein; putative OmpA/MotB domain [Frankia
alni ACN14a]
Length = 252
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/152 (26%), Positives = 60/152 (39%), Gaps = 7/152 (4%)
Query: 10 LSAITMMSISGIDNLD-TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
L A ++ + G D++D T IS + +++ +E F FDT S++I D
Sbjct: 98 LVANSLYRLPGPDDVDLTGISGENLAATDAAGRETFILIFNSDALFDTGSFAIGSTDTLD 157
Query: 69 LSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
+ D + GH D GS S+ L RRA V Y V GI AS +
Sbjct: 158 ATIRLINSHYAGGDIQVRGHTDATGSAASNQTLSERRADTVRRYLVDHGIRASSVTSVGL 217
Query: 129 GKEMPSVYGH------DEDAYAKNRRAIVFLK 154
G P D + NRR + ++
Sbjct: 218 GSTHPLAEEANPDGSPDPEGQRFNRRVELVVR 249
>gi|170741264|ref|YP_001769919.1| OmpA/MotB domain-containing protein [Methylobacterium sp. 4-46]
gi|168195538|gb|ACA17485.1| OmpA/MotB domain protein [Methylobacterium sp. 4-46]
Length = 337
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 47/118 (39%), Gaps = 12/118 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLG--------SWLEKHDCDFLIEGHAD----ELGSR 95
+ V F ++RP L + ++GH D +
Sbjct: 217 LQSEVLFAAGQATLRPEAGAELDRIAVAIIELGRQIPPDIPWVLRVDGHTDARPISSATF 276
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ AL R+ AV Y V RGI R+ ++G+ P G E+AYA+NRR + L
Sbjct: 277 PSNWALSAARSIAVVQYMVGRGIPPQRLLAGAFGEFQPLDTGTTEEAYARNRRIELKL 334
>gi|294850964|ref|ZP_06791640.1| chemotaxis protein MotB [Brucella sp. NVSL 07-0026]
gi|294821607|gb|EFG38603.1| chemotaxis protein MotB [Brucella sp. NVSL 07-0026]
Length = 343
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 47/119 (39%), Gaps = 13/119 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIEGHADELG-----S 94
V F T S I P + L + + + + ++GH D +
Sbjct: 222 FQSEVLFPTGSAKINPKGQVEMKKLADAIIQLNREIPDDINWVLRVDGHTDNVPLAGTGR 281
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA AV + +A G+ A+R+ +G+ P + DA A+NRR + L
Sbjct: 282 FRDNWELSSARATAVVKFLIANGVPANRLVAAGFGEYQPLDTANTADARARNRRIELKL 340
>gi|167625831|ref|YP_001676125.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis
HAW-EB4]
gi|167355853|gb|ABZ78466.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4]
Length = 201
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/179 (21%), Positives = 65/179 (36%), Gaps = 24/179 (13%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDT-------VLNESSLQEQFSSSVGD--- 50
M + IL +M I+ +D T+++ V E + +++ +
Sbjct: 4 MIFLLSLAILGGCSMRDITTMDQPTTQVNDLSDIDHDGVIVARERCTETTLGATIDNYGC 63
Query: 51 ------------SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNS 97
V F SY I P + + +++ + +IEGH + GS
Sbjct: 64 GKIKPINERQELKVLFANDSYYIDPQYYPQVEVIATFMRDYPNTQAVIEGHCSKTGSHEH 123
Query: 98 SIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+ L RA AV + R I + R+ Y + P H A+ NRR I L G
Sbjct: 124 NQVLSQNRANAVSSLLAERFGIDSDRLSAVGYSFDRPVDPTHTRAAHKVNRRVIAELTG 182
>gi|94968752|ref|YP_590800.1| OmpA/MotB family outer membrane protein [Candidatus Koribacter
versatilis Ellin345]
gi|94550802|gb|ABF40726.1| outer membrane protein, OmpA/MotB family [Candidatus Koribacter
versatilis Ellin345]
Length = 286
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 51/141 (36%), Gaps = 4/141 (2%)
Query: 22 DNLDTKISSPDTVLNES-SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKH 79
D +I +N+ F V+F + S+ AD + L++L + +
Sbjct: 140 DTNKQQIDENQQAVNKRFDDLTDFDVKKEAVVYFVSGKSSLAAADKKALTDLAAEATKLT 199
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASR--MKVTSYGKEMPSVYG 137
++G AD G+ + L RA+AV N+ + R + + G P
Sbjct: 200 GYIIEVKGFADSTGNAAMNQTLSKDRAFAVVNFLMQDCSVPPRHIVSPGAMGISNPVASN 259
Query: 138 HDEDAYAKNRRAIVFLKGCRA 158
+NRR V + +
Sbjct: 260 ETATGRKENRRVEVKVMVNKG 280
>gi|22127533|ref|NP_670956.1| hypothetical protein y3659 [Yersinia pestis KIM 10]
gi|45443397|ref|NP_994936.1| hypothetical protein YP_3665 [Yersinia pestis biovar Microtus str.
91001]
gi|21960635|gb|AAM87207.1|AE013969_3 hypothetical [Yersinia pestis KIM 10]
gi|45438266|gb|AAS63813.1| conserved hypothetical protein [Yersinia pestis biovar Microtus
str. 91001]
Length = 545
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 36/121 (29%), Gaps = 10/121 (8%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPAD--IQVLSNLGSWLEKHDCDFLIEGHADELG----S 94
+ F T ++ + + LG L D + GH D S
Sbjct: 394 PRGWLLIFTSDGAFRTGEATLSEEFINKKNIERLGLALAPWPGDIEVIGHTDNKPFRSTS 453
Query: 95 RNSSIALGLRRAYAVFNYFVA----RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
N+++ L RA V + + G+ P E+ +NRR
Sbjct: 454 GNNNLKLSAARASVVADKLRESTQINETHQREISAIGRGESDPLADNATEEGRKRNRRVD 513
Query: 151 V 151
+
Sbjct: 514 I 514
>gi|127512023|ref|YP_001093220.1| OmpA/MotB domain-containing protein [Shewanella loihica PV-4]
gi|126637318|gb|ABO22961.1| OmpA/MotB domain protein [Shewanella loihica PV-4]
Length = 367
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 60/143 (41%), Gaps = 6/143 (4%)
Query: 21 IDNLDTKISSPDTVLNESSL----QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
D+ D ++P +++ +E S+ F +S + A + L +++
Sbjct: 219 TDDKDQCANTPSNHKVDANGCTVYREVTEKHELGSIRFANNSAVVNSASYGQIEKLANYM 278
Query: 77 -EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPS 134
+ LI GHA +G+ + ++ L RRA AV V++ + R+ YG P
Sbjct: 279 NQNPRATVLIGGHASNVGNPDYNMDLSERRANAVAELLVSKYGISQDRVSAKGYGITQPL 338
Query: 135 VYGHDEDAYAKNRRAIVFLKGCR 157
+ G +A NRR + G R
Sbjct: 339 IEGKSAEANKANRRIEAHVTGVR 361
>gi|262197467|ref|YP_003268676.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
gi|262080814|gb|ACY16783.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
Length = 540
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/152 (19%), Positives = 51/152 (33%), Gaps = 18/152 (11%)
Query: 21 IDNLDTKISSPDTVLNES----SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-- 74
+D D + P ++ + E + D V F T I VL +
Sbjct: 385 VDREDNCPTLPTDGRGKAGCPVAYVEGDQIIILDKVHFATDEDVILDDSKPVLEAVAQVL 444
Query: 75 WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
IEGH D S ++ L RR +V + + G+ A R++ +G P
Sbjct: 445 RTRPDIERVRIEGHTDVRASDAYNLDLSQRRVNSVMQFLIDSGVGAERLEAKGWGHTRPI 504
Query: 135 VYGH---------DEDA---YAKNRRAIVFLK 154
+ D + + NRR ++
Sbjct: 505 IDDAHCDRPDEQLDAECTRLTSMNRRVEFHIR 536
>gi|254197945|ref|ZP_04904367.1| ompA family protein [Burkholderia pseudomallei S13]
gi|169654686|gb|EDS87379.1| ompA family protein [Burkholderia pseudomallei S13]
Length = 254
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 58/156 (37%), Gaps = 24/156 (15%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSS---YSIRPADIQ 67
+ + +++++ + D P+ V + F I +
Sbjct: 109 AGLGVIAVASCNPSDVAAPLPERV------------ELPTDTLFAFDKGGFEDISADGRR 156
Query: 68 VLSNLGSWLEKHDCDF---LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
L +L + ++ ++ G+ D LGS + L RA V +Y +A GI A+++
Sbjct: 157 QLGDLVASIKAKILSINHLVVTGYTDRLGSDEHNARLSSERARTVADYMIAEGIPAAKIT 216
Query: 125 VTSYGKEMPSVYGHDED------AYAKNRRAIVFLK 154
G P V ++ + KNRR + +K
Sbjct: 217 AVGRGAADPVVVCNNGEQPELIRCLQKNRRVEIRIK 252
>gi|323491407|ref|ZP_08096592.1| Outer membrane protein [Vibrio brasiliensis LMG 20546]
gi|323314533|gb|EGA67612.1| Outer membrane protein [Vibrio brasiliensis LMG 20546]
Length = 203
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 65/139 (46%), Gaps = 1/139 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
D + D + + + + F S I+PA + + + +LE +
Sbjct: 52 DLCPQTPAKADIDNDGCGTYIKTQEEMSLHILFANDSSEIQPAFLAQIREMSEFLEAYPS 111
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ G+A ++G + ++AL RRA +V + + G+++ R+++ +G +G DE
Sbjct: 112 TSIELRGYASKVGKPDYNMALSERRAQSVEDALLDNGVASDRVRIVGFGDTELEAFGDDE 171
Query: 141 DAYAKNRRAIVFLKGCRAN 159
++AKNR+ + + G + N
Sbjct: 172 ISHAKNRKVVATVVGHKGN 190
>gi|254525016|ref|ZP_05137071.1| OmpA family protein [Stenotrophomonas sp. SKA14]
gi|219722607|gb|EED41132.1| OmpA family protein [Stenotrophomonas sp. SKA14]
Length = 212
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 48/131 (36%), Gaps = 10/131 (7%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD----FLIE 86
+ + SV F +S ++P ++L +L + L + ++
Sbjct: 70 AGPLAAGRVTLIDGRIGISGSVLFALNSDQLQPEGQELLRSLAAPLAAYLGSREEILMVS 129
Query: 87 GHADE------LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
G D+ + L +R+ V +A G+ A + ++G E P E
Sbjct: 130 GFTDDAPVREGNRRFADNWELSAQRSLTVTRTLIADGVPADAVFAAAFGSEQPVSSNASE 189
Query: 141 DAYAKNRRAIV 151
D A+NRR +
Sbjct: 190 DGRARNRRVEI 200
>gi|162451691|ref|YP_001614058.1| outer membrane protein [Sorangium cellulosum 'So ce 56']
gi|161162273|emb|CAN93578.1| outer membrane protein [Sorangium cellulosum 'So ce 56']
Length = 632
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 45/126 (35%), Gaps = 14/126 (11%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS--WLEKHDCDFLIEGHADELGSRNSSI 99
+ + V F T I L + + IEGH D + ++
Sbjct: 387 RGDEIVITEQVHFATDKDIILEDSNSTLEAVAQVLIDNPDIREVRIEGHTDVRATDLYNM 446
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH---------DEDAY---AKNR 147
AL RR +V Y +A+G+ +SR++ YG P D +KNR
Sbjct: 447 ALSQRRVASVMAYLIAKGVESSRLQAVGYGHTQPIYDDTGCQGPDDQLSPDCQFMTSKNR 506
Query: 148 RAIVFL 153
R + +
Sbjct: 507 RVVFRI 512
>gi|161521586|ref|YP_001585013.1| hypothetical protein Bmul_5051 [Burkholderia multivorans ATCC
17616]
gi|189352247|ref|YP_001947874.1| hypothetical protein BMULJ_03465 [Burkholderia multivorans ATCC
17616]
gi|160345636|gb|ABX18721.1| OmpA/MotB domain protein [Burkholderia multivorans ATCC 17616]
gi|189336269|dbj|BAG45338.1| putative flagellar motor protein [Burkholderia multivorans ATCC
17616]
Length = 214
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 53/142 (37%), Gaps = 10/142 (7%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS----NLGSW 75
+ + + + ++ F +S ++P ++L L ++
Sbjct: 58 AQQRKTLEQALAGPLAAGRVTLVNGRIGIAGNLLFALNSDQLQPDGRELLKTLAGPLAAY 117
Query: 76 LEKHDCDFLIEGHADELG------SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
L+ D ++ G AD+ + L +RA V + G+ AS + ++G
Sbjct: 118 LKTRDQILMVSGFADDQQVRAGNRMFADNWELSAKRALTVTRALIDAGVPASSVFAAAFG 177
Query: 130 KEMPSVYGHDEDAYAKNRRAIV 151
E P D++ AKNRR +
Sbjct: 178 SEQPVSSNADDEGRAKNRRVEI 199
>gi|254510529|ref|ZP_05122596.1| OmpA family protein [Rhodobacteraceae bacterium KLH11]
gi|221534240|gb|EEE37228.1| OmpA family protein [Rhodobacteraceae bacterium KLH11]
Length = 208
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/164 (22%), Positives = 67/164 (40%), Gaps = 19/164 (11%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNES---------------SLQEQFSSSVGDSVF 53
I++ ++++G T N + L +F++ V +
Sbjct: 5 IIALGLSVAVAGCTREAGYELDQGTFGNATLNNIQVLNGELTYGQILARRFAAEVPTQIN 64
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F S + + ++L W+++ F + GH D +G+ + LG RRA A +
Sbjct: 65 FAFDSAQLDASAQRILLQQADWIKQFPEVRFRVYGHTDAVGTSAYNKRLGQRRANAAVAF 124
Query: 113 FVARGISASRMKVT-SYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+GIS SR++ S+GK P V D +NRR + + G
Sbjct: 125 LTQQGISRSRLEAVVSFGKSRPLV--ATPDRDRRNRRTVTDVSG 166
>gi|116253762|ref|YP_769600.1| hypothetical protein RL4023 [Rhizobium leguminosarum bv. viciae
3841]
gi|115258410|emb|CAK09513.1| putative chemotaxis protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 343
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 39/102 (38%), Gaps = 5/102 (4%)
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG-----SRNSSIALGLRRAYAVFN 111
+ +L + + ++GH D + + L RA +V
Sbjct: 239 GQTEMAKLAAALLDLAKEIPPEINWVLRVDGHTDNVPLGGTGRYRDNWELSSARAISVVK 298
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +A+G+ A R+ +G+ P G DA + NRR + L
Sbjct: 299 FLIAQGVPADRLVAAGFGEFQPIAPGDTPDARSTNRRIELKL 340
>gi|238795889|ref|ZP_04639402.1| Outer membrane protein A [Yersinia mollaretii ATCC 43969]
gi|238720352|gb|EEQ12155.1| Outer membrane protein A [Yersinia mollaretii ATCC 43969]
Length = 350
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/158 (20%), Positives = 66/158 (41%), Gaps = 12/158 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + +S D ++ + + + ++ V F + +++P Q L
Sbjct: 185 GMLSVGVSYRFGQDDVVAPIAPAPAPAPVVDTKRFTLKSDVLFAFNKSTLKPEGQQALDQ 244
Query: 72 LGSW---LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L S ++ D ++ G AD +G ++AL RRA +V +Y V++GI A ++
Sbjct: 245 LYSQLSSIDPKDGSVVVLGFADRIGQPAPNLALSQRRADSVRDYLVSKGIPADKITARGE 304
Query: 129 GKEMPSVYGHDE---------DAYAKNRRAIVFLKGCR 157
G+ P + + A +RR + +KG +
Sbjct: 305 GQANPVTGNTCDNVKPRAALIECLAPDRRVEIEVKGYK 342
>gi|119483418|ref|ZP_01618832.1| outer membrane protein F [Lyngbya sp. PCC 8106]
gi|119458185|gb|EAW39307.1| outer membrane protein F [Lyngbya sp. PCC 8106]
Length = 296
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 43/113 (38%), Gaps = 1/113 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIA 100
+ ++ V F T++ S+RP +L + + H D+ G +++
Sbjct: 182 QGLVVTLPSDVLFATNTNSLRPGASVILDTLIADLENYKGASVRVAAHTDDTGKAQDNLS 241
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L L++A A+ Y S YG+ P+V NRR V +
Sbjct: 242 LSLQQAEAIVAYLSTAIGSEYHWVAIGYGEGQPTVENDSTTNKQLNRRIEVAI 294
>gi|330502404|ref|YP_004379273.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
gi|328916690|gb|AEB57521.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
Length = 217
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/178 (18%), Positives = 56/178 (31%), Gaps = 25/178 (14%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTK--ISSPDTVLNESSLQEQ--------------- 43
M+ + I + + +G + + + P + + L E
Sbjct: 1 MRANKIIAFTCCLLIAGCAGSEKKEVAKPAAMPAPQVTRAWLDEYEPKLREAVKGSQFEF 60
Query: 44 ----FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE----KHDCDFLIEGHADELGSR 95
V V + L + + D ++ GHAD G
Sbjct: 61 ERRENLLVVTAPVQGSFNPDRPHMLLPASLGPITRVAKLLETDEDIAVVVLGHADSSGDA 120
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L +RA AV + F G+ SR++V G +MP A NRR + L
Sbjct: 121 ALNRDLSQQRARAVTSIFRLSGLKQSRLQVMGLGSDMPRAANDSAAGRALNRRVEILL 178
>gi|149376619|ref|ZP_01894379.1| Flagellar motor protein [Marinobacter algicola DG893]
gi|149359137|gb|EDM47601.1| Flagellar motor protein [Marinobacter algicola DG893]
Length = 260
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 39/117 (33%), Gaps = 4/117 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
V+ + E S+ +S+ F + V+ + + L D +EG D
Sbjct: 124 QGVVTLETSDEWLELSLRNSLLFGSGDAEPHYDAFDVVEKIAAVLRNRDNAIRVEGFTDN 183
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
S+ L R+ AV G+ A R+ YG+ P E+
Sbjct: 184 RPINTSAFPSNWELSAARSAAVVRMLSMEGVEAERLAAVGYGEHQPVARNDTEEGRR 240
>gi|89073378|ref|ZP_01159902.1| hypothetical protein SKA34_20552 [Photobacterium sp. SKA34]
gi|89050865|gb|EAR56339.1| hypothetical protein SKA34_20552 [Photobacterium sp. SKA34]
Length = 166
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 68/160 (42%), Gaps = 14/160 (8%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPD-----------TVLNESSLQEQFSSSVG 49
M+ S +L + + + D ++ + L ++ E +
Sbjct: 1 MKKS--LFVLCLLALFTGCSTDTYVSQENINKFDDLTVKKFLIAELKPKTIAEDKKIYLS 58
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
FD ++P DI+ L + + + D LI GH D GS + + AL LRR++A+
Sbjct: 59 LISHFDFDKAVLKPEDIKELDDFIAKIHSLSGDILIAGHTDYQGSDSYNEALSLRRSHAI 118
Query: 110 FNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRR 148
+Y AR + +V +G++ P V GH + A NRR
Sbjct: 119 ESYLKARIDESHYHFEVKYFGEKNPIVKGHSLKSNALNRR 158
>gi|88811500|ref|ZP_01126755.1| hypothetical protein NB231_12214 [Nitrococcus mobilis Nb-231]
gi|88791389|gb|EAR22501.1| hypothetical protein NB231_12214 [Nitrococcus mobilis Nb-231]
Length = 435
Score = 63.3 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 36/104 (34%), Gaps = 5/104 (4%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSIALGLRRAYAV 109
F + S + A VL + L++ L+ GH D++ + L +RA
Sbjct: 324 FRSGSAELSAAYAPVLDKVAGALKQVPGRVLVVGHTDDVPIRSLRFKDNYELSRQRALNA 383
Query: 110 FNYFVARGISASRMKVTSYGKEMPSV-YGHDEDAYAKNRRAIVF 152
R R+ G + P + A+NRR +
Sbjct: 384 AERLKERLDDPGRVSYLGVGPDQPRYRPVDTPENRARNRRIEII 427
>gi|332291918|ref|YP_004430527.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332170004|gb|AEE19259.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 306
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 52/132 (39%), Gaps = 3/132 (2%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN---LGSWLEKHDC 81
+ D E + ++F+ S+ ++ + L +K
Sbjct: 174 NQANGDLDATNTALQDIENSLRADPLVLYFNYGEASVTLSEKKRLQIGDISCYLDKKEGA 233
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
+EGH D GS ++ LGL RA Y GI S++K S G+ P E+
Sbjct: 234 TITVEGHTDSQGSLTTNDRLGLERAEFAKAYLANNGIPESKIKTVSKGERSPIETNDTEE 293
Query: 142 AYAKNRRAIVFL 153
+ KNRRA++ L
Sbjct: 294 GHNKNRRAVITL 305
>gi|328675505|gb|AEB28180.1| Outer membrane lipoprotein omp16 precursor [Francisella cf.
novicida 3523]
Length = 417
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 64/179 (35%), Gaps = 26/179 (14%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKISSPDTVLN-ESSLQEQFSSS------------- 47
+ S + +I S + + K P T E E S+
Sbjct: 3 KLSKLCLIASLLATLVACQTTADKDKNKGPLTFPTLEPCTPELLQSNKSFICVKEQAGPD 62
Query: 48 -VGDSVFFDTSSYSIRPADIQVLSNLGSW----------LEKHDCDFLIEGHADELGSRN 96
+ ++ FD SY++ +VL L ++ ++ + + D+ +
Sbjct: 63 LIETNIKFDADSYTLNAQAKEVLDKLFAYLKLTDTTRFTIKGYAGKVESKILTDQKILTD 122
Query: 97 SSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+I L RA +V Y V +G S+ + + + G + P + A N+R + L+
Sbjct: 123 YNIRLSKNRASSVEEYLVNKGLDSSDGITIKALGYQDPIAPNDSTSSRAINQRVEITLE 181
>gi|156976199|ref|YP_001447105.1| hypothetical protein VIBHAR_04970 [Vibrio harveyi ATCC BAA-1116]
gi|156527793|gb|ABU72878.1| hypothetical protein VIBHAR_04970 [Vibrio harveyi ATCC BAA-1116]
Length = 350
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
F ++ + L+ L S++ + L++GH D +GS+ +++ + +RA V
Sbjct: 212 FQFGQKTLSRSQQSTLAALYSYISVDDRVTKILVDGHTDNVGSQLANLNVSRQRAEQVAE 271
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +G+ S ++V ++G P + + AKNRR + L
Sbjct: 272 ALIQQGVDRSLIEVRAHGSRYPIASNNTQAGQAKNRRVTLRL 313
>gi|78049429|ref|YP_365604.1| hypothetical protein XCV3873 [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|325928969|ref|ZP_08190130.1| flagellar motor protein [Xanthomonas perforans 91-118]
gi|78037859|emb|CAJ25604.1| OmpA family protein [Xanthomonas campestris pv. vesicatoria str.
85-10]
gi|325540658|gb|EGD12239.1| flagellar motor protein [Xanthomonas perforans 91-118]
Length = 223
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 49/131 (37%), Gaps = 10/131 (7%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG----SWLEKHDCDFLIE 86
+ + +V F +S ++P +VL +L +L D ++
Sbjct: 70 AAPLAAGRVTLVDGRIGIRGNVLFAFNSDELQPEGREVLKSLATPLTHYLRARDEILMVS 129
Query: 87 GHADELG------SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
G D+ + L +RA V +A G+ AS + ++G + P DE
Sbjct: 130 GFTDDRPVLGGNRRYADNWELSAQRALTVTRALIAEGVPASSVFAAAFGSQQPVDSNADE 189
Query: 141 DAYAKNRRAIV 151
AKNRR +
Sbjct: 190 ARRAKNRRVEI 200
>gi|262274549|ref|ZP_06052360.1| sodium-type flagellar protein MotY precursor [Grimontia hollisae
CIP 101886]
gi|262221112|gb|EEY72426.1| sodium-type flagellar protein MotY precursor [Grimontia hollisae
CIP 101886]
Length = 292
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYAV 109
+ +D + + A + L+ + ++ L+ + D G++ ++ L RA +
Sbjct: 184 LHYDENGAELNKASMARLAQIAEFVRYSPDIDLVLMATYTDNRGAKVANQRLSEIRAQKL 243
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
YF++ G+ R++V +YG+ P KNRR ++ L
Sbjct: 244 EAYFMSLGLPKDRIQVEAYGERRPIAENESPIGRNKNRRVVISL 287
>gi|17861366|gb|AAK61593.1| OmpA [Pasteurella multocida]
Length = 348
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 10/121 (8%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRR 105
++ V F ++PA VL + + + + G+ D LGS ++ L RR
Sbjct: 228 TLNTDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSASVAVAGYTDCLGSDAYNLKLSQRR 287
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLKGC 156
A V NY VA+G++ + + T +G+ P A +RR + +KG
Sbjct: 288 ADTVANYLVAKGVAQNAISATGHGEANPVTGNKCDSVKGRKALIACLADDRRVEIAVKGN 347
Query: 157 R 157
+
Sbjct: 348 K 348
>gi|317153788|ref|YP_004121836.1| OmpA/MotB domain-containing protein [Desulfovibrio aespoeensis
Aspo-2]
gi|316944039|gb|ADU63090.1| OmpA/MotB domain protein [Desulfovibrio aespoeensis Aspo-2]
Length = 247
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 51/131 (38%), Gaps = 6/131 (4%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGH 88
+ +++ + + V V F + ++ P +++++ L + + D + I G+
Sbjct: 111 GVEGLVSANFEDGLITIRVPGDVMFGSGQVNLSPKGVELVTALKDFFIQHRDQNIKIIGY 170
Query: 89 ADELGS-----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
D + + + RA V + GI ++R+ T P E+
Sbjct: 171 TDNISPGKNSRFLDNWEISALRAVNVLRELLGMGIESTRLTATGLAYLNPIYPNTSEEFR 230
Query: 144 AKNRRAIVFLK 154
AKNRR L+
Sbjct: 231 AKNRRVEFVLE 241
>gi|330971267|gb|EGH71333.1| OmpA/MotB [Pseudomonas syringae pv. aceris str. M302273PT]
Length = 447
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
+ A + + L + ++ + + + + + F S + Q
Sbjct: 303 AIVAQSGFVAQTVQVLKVQPTAQMPA--DYQALARKAERLSVNFRFAQGSARLDNKAQQD 360
Query: 69 LSNLGSWLEKHD---CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
L + +L+ D + G D + L RA AV + RG++ +
Sbjct: 361 LKRVADYLKSSDKLDRHVTLVGFGDAKSDPERAALLSRLRAMAVRRELLKRGVTFRDI-- 418
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G EMP +D KNRR V+++
Sbjct: 419 VGLGDEMPVATNEIDDGRIKNRRVEVWVQ 447
>gi|254254994|ref|ZP_04948311.1| Flagellar motor protein [Burkholderia dolosa AUO158]
gi|124899639|gb|EAY71482.1| Flagellar motor protein [Burkholderia dolosa AUO158]
Length = 214
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 52/142 (36%), Gaps = 10/142 (7%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS----NLGSW 75
+ + + + +V F +S ++P +L L ++
Sbjct: 58 AQQRKSLEQALAGPLAAGRVTLVNGRIGISGNVLFALNSDQLQPEGRALLKTLAGPLAAY 117
Query: 76 LEKHDCDFLIEGHADELGS------RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
L+ D ++ G AD+ + L +RA V + G+ AS + ++G
Sbjct: 118 LKTRDEILMVSGFADDQQVRAGNRLFADNWELSAKRALTVTRSLIDAGVPASSVFAAAFG 177
Query: 130 KEMPSVYGHDEDAYAKNRRAIV 151
E P D++ AKNRR +
Sbjct: 178 SEHPVSSNADDEGRAKNRRVEI 199
>gi|95930151|ref|ZP_01312890.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684]
gi|95133845|gb|EAT15505.1| OmpA/MotB [Desulfuromonas acetoxidans DSM 684]
Length = 629
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 49/127 (38%), Gaps = 5/127 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEG 87
P T + Q + + + F + S + ++ L L ++ + ++ G
Sbjct: 503 PQTAPADYLAATQGAKRLSVTYRFKSGSTELDNRALRDLDRLVDFMHQGRNRYRPLMLFG 562
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
AD +G + + L +R V +RG++A V G+ MP KNR
Sbjct: 563 FADNIGENDVNQVLSEKRTRKVSTALQSRGLNAK--VVMGLGEAMPVADNATSAGREKNR 620
Query: 148 RAIVFLK 154
R V++
Sbjct: 621 RVEVWIS 627
>gi|238757126|ref|ZP_04618313.1| OmpA domain protein [Yersinia aldovae ATCC 35236]
gi|238704504|gb|EEP97034.1| OmpA domain protein [Yersinia aldovae ATCC 35236]
Length = 433
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Query: 53 FFDTSSYSIRPADI--QVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAV 109
FD++S ++P ++L +L LE + LI GH+D GS + ++ + +RA V
Sbjct: 314 LFDSNSTKLKPNAQTNEILHSLLQLLEHNQGSKILIVGHSDNTGSDSFNMTISEQRALVV 373
Query: 110 FNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
++ + S+ + G P + +NRR V L + T
Sbjct: 374 RDWLIKNSSLSSENFIIRGMGSLEPVASNDTKIGQDQNRRVEVLLLPKQDKT 425
>gi|153806760|ref|ZP_01959428.1| hypothetical protein BACCAC_01032 [Bacteroides caccae ATCC 43185]
gi|149131437|gb|EDM22643.1| hypothetical protein BACCAC_01032 [Bacteroides caccae ATCC 43185]
Length = 238
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 53/143 (37%), Gaps = 11/143 (7%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW--LE 77
+ + +++ + + + F T + ++ A LS + +
Sbjct: 79 AAAEAKQIEGAQVEQITDNNGLQAVKVTFDSGILFTTGNANLSAAAKSALSKFANNVLNQ 138
Query: 78 KHDCDFLIEGHADEL--------GSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSY 128
D D I G+ D S+ ++ L RA +V +Y ++ G+S +++K V
Sbjct: 139 NRDMDVSIYGYTDNQGWKNSTAAQSQQKNLNLSQERAQSVSSYLLSCGVSTNQIKGVQGM 198
Query: 129 GKEMPSVYGHDEDAYAKNRRAIV 151
G+ P +NRR V
Sbjct: 199 GESDPVASNDTAAGREQNRRVEV 221
>gi|110833095|ref|YP_691954.1| hypothetical protein ABO_0234 [Alcanivorax borkumensis SK2]
gi|110646206|emb|CAL15682.1| Flagellar motor protein [Alcanivorax borkumensis SK2]
Length = 213
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 53/132 (40%), Gaps = 10/132 (7%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE----KHDCDFLIE 86
D + + + SV F +S ++P +LS+L L+ +HD ++
Sbjct: 70 ADPLASGRVTFNNGRIGISGSVLFQLNSDRLQPEGKALLSDLVKPLQVFLSQHDDMLMVS 129
Query: 87 GHADELGSRN------SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
G D L + L +RA V + +G+ A ++ ++G P D
Sbjct: 130 GFTDALPINRGNGRYADNWGLSAQRALTVTRTLIEQGMPADQVFAAAFGDNQPVAPNDDA 189
Query: 141 DAYAKNRRAIVF 152
D+ A+NRR +
Sbjct: 190 DSRARNRRVELT 201
>gi|330953391|gb|EGH53651.1| OmpA/MotB [Pseudomonas syringae Cit 7]
Length = 447
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 51/149 (34%), Gaps = 7/149 (4%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
+ A + + L + ++ + + + + + F S + Q
Sbjct: 303 AIVAQSGFVAQTVQVLKVQPTAQMPA--DYQALARKAERLSVNFRFAQGSARLDNKAQQD 360
Query: 69 LSNLGSWLEKHD---CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
L + +L+ D + G D + L RA AV + G++ +
Sbjct: 361 LKRVADYLKSSDKLDRHVTLVGFGDAKSDPERAALLSRLRAMAVRRELLKSGVTFRDI-- 418
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G EMP +D KNRR V+++
Sbjct: 419 VGLGDEMPVATNDIDDGRIKNRRVEVWVQ 447
>gi|118602526|ref|YP_903741.1| OmpA/MotB domain-containing protein [Candidatus Ruthia magnifica
str. Cm (Calyptogena magnifica)]
gi|118567465|gb|ABL02270.1| OmpA/MotB domain protein [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 190
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+++ + + ++V ++F I + + +++ +
Sbjct: 56 ESQGFSRSSVDISSIVEPVVVADFRKTNVSFVLYFSYDDTEIDEDSTKQIVKHANFMRNN 115
Query: 80 D-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ +EGH DE G+R ++ALG RA +V +SR+KV S+G+E P + H
Sbjct: 116 PELNLRLEGHTDERGTREYNLALGENRALSVKEILG-LYDLSSRVKVISFGEEKPILQRH 174
Query: 139 DEDAYAKNRRAIVF 152
DED + KNRR
Sbjct: 175 DEDVWQKNRRVEFI 188
>gi|90408384|ref|ZP_01216546.1| OmpA family protein [Psychromonas sp. CNPT3]
gi|90310477|gb|EAS38600.1| OmpA family protein [Psychromonas sp. CNPT3]
Length = 201
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/184 (19%), Positives = 65/184 (35%), Gaps = 27/184 (14%)
Query: 1 MQYSTIFII---LSAITMMSIS----------------------GIDNLDTKISSPDTVL 35
M+ I ++ +SA ++ +I DN + D
Sbjct: 1 MKLFLIMLLTFFVSACSLQAIDMAKEPTEQKFDLSDEEADGVILARDNCPGSVLGADINN 60
Query: 36 NESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGS 94
N L + F+T SY + + + +L E IEGH G+
Sbjct: 61 NGCGLTTAVKVRAQLMINFETDSYVVSSNYLPKIEHLSQFMHEYPQTTVTIEGHTSHRGT 120
Query: 95 RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ + L +RA + + + ASR+ YG + + G DE +A+NRR + +
Sbjct: 121 ASYNKILSQQRADMIKKILIEEYQVEASRITAIGYGFDQLLLEGDDEYVHARNRRIVAEI 180
Query: 154 KGCR 157
+
Sbjct: 181 SSEK 184
>gi|66045711|ref|YP_235552.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
gi|63256418|gb|AAY37514.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
Length = 447
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
+ A + + L + ++ + + + + + F S + Q
Sbjct: 303 AIVAQSGFVAQTVQVLKVQPTAQMPA--DYQALARKAERLSVNFRFAQGSARLDNKAQQD 360
Query: 69 LSNLGSWLEKHD---CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
L + +L+ D + G D + L RA AV + RG++ +
Sbjct: 361 LKRVADYLKSSDKLDRHVTLVGFGDAKSDPERAALLSRLRAMAVRRELLKRGVTFRDI-- 418
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G EMP +D KNRR V+++
Sbjct: 419 VGLGDEMPVATNEIDDGRIKNRRVEVWVQ 447
>gi|312129863|ref|YP_003997203.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132]
gi|311906409|gb|ADQ16850.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132]
Length = 300
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 47/116 (40%), Gaps = 6/116 (5%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSS----I 99
++ D + F + SY I P VL + + ++ + ++EG+ D + +
Sbjct: 168 MVNLSDKMLFTSGSYKISPRAYSVLEKVAAIIKSRPDLEVMVEGYTDNVSINTACIEDNW 227
Query: 100 ALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L ++R+ +V ++ + +++ G+ + A NRR + L
Sbjct: 228 DLSVKRSTSVVRTLQSKFGVDPNKIIAAGRGEYNTLTSNSTAEGRAINRRTRIILM 283
>gi|166713623|ref|ZP_02244830.1| hypothetical protein Xoryp_19825 [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 224
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 48/131 (36%), Gaps = 10/131 (7%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS----NLGSWLEKHDCDFLIE 86
+ + +V F +S ++P +VL L +L + ++
Sbjct: 70 AAPLAAGRVTLVDGRIGIRGNVLFAFNSDELQPEGREVLKSLAAPLAQYLRTREEILMVS 129
Query: 87 GHADELG------SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
G D+ + L +RA V +A G+ AS + ++G + P DE
Sbjct: 130 GFTDDRPVLGGNRRYADNWELSAQRALTVTRALIAEGVPASSVFAAAFGSQQPVDSNADE 189
Query: 141 DAYAKNRRAIV 151
AKNRR +
Sbjct: 190 ARRAKNRRVEI 200
>gi|91793918|ref|YP_563569.1| flagellar motor protein MotB [Shewanella denitrificans OS217]
gi|91715920|gb|ABE55846.1| OmpA/MotB [Shewanella denitrificans OS217]
Length = 318
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 54/133 (40%), Gaps = 5/133 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
D + SL +Q + + F + S ++P V+ ++GS L+ + GH D
Sbjct: 166 VDGAIEIESLGQQIIIRIREKGSFASGSGFLQPKFKPVIRSIGSLLKDVPGIITVAGHTD 225
Query: 91 ELGS----RNSSIALGLRRAYAVF-NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ +S+ L RA AV + G +RMKV V + ++
Sbjct: 226 GMHISNELYSSNWDLSSARAVAVAHEFMRVPGFDETRMKVVGMASNDQLVSNESSENRSQ 285
Query: 146 NRRAIVFLKGCRA 158
NRR + ++ +A
Sbjct: 286 NRRVEITIEQGKA 298
>gi|326336238|ref|ZP_08202410.1| OmpA family protein [Capnocytophaga sp. oral taxon 338 str. F0234]
gi|325691747|gb|EGD33714.1| OmpA family protein [Capnocytophaga sp. oral taxon 338 str. F0234]
Length = 278
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 6/114 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSS----IA 100
S+ D + F + SY++ P +VL + K D +F++EGH D + +N+
Sbjct: 144 VSISDKMLFSSGSYNVTPRAREVLGKVAKVVNNKPDFEFMVEGHTDNVPIKNNCIKDNWD 203
Query: 101 LGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L + RA AV ++ +RM + +P D A NRR + +
Sbjct: 204 LSVLRATAVVRILQNDFGVTPARMTAAGRSEYVPVTTNASADGRALNRRTRIVV 257
>gi|323492355|ref|ZP_08097508.1| sodium-type flagellar protein MotY precursor [Vibrio brasiliensis
LMG 20546]
gi|323313402|gb|EGA66513.1| sodium-type flagellar protein MotY precursor [Vibrio brasiliensis
LMG 20546]
Length = 293
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYA 108
+ +D +S + + L+ + +++ + L+ + D S+++S +L RRA
Sbjct: 184 ILHYDRTSVELNKQSQKRLAQIAEYIKHNQDIDLVLVSTYTDAEDSKSASQSLSERRAEV 243
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ YF + G+ R++V YGK P +NRR ++ L
Sbjct: 244 LQEYFKSLGLPEDRIRVQGYGKRRPIDDNASPIGKDRNRRVVISL 288
>gi|261253570|ref|ZP_05946143.1| sodium-type flagellar protein MotY precursor [Vibrio orientalis CIP
102891]
gi|260936961|gb|EEX92950.1| sodium-type flagellar protein MotY precursor [Vibrio orientalis CIP
102891]
Length = 293
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYA 108
+ +D +S + + L+ + +++ + L+ + D S+++S L RRA
Sbjct: 184 ILHYDRTSVELNKQSQKRLAQIAEYIKHNQDIDLVLVSTYTDAEDSKSASQNLSERRAEV 243
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ NYF + G+ R++V YGK P +NRR ++ L
Sbjct: 244 LQNYFKSLGLPEDRIRVQGYGKRRPIDDNASPIGKDRNRRVVISL 288
>gi|156975261|ref|YP_001446168.1| hypothetical protein VIBHAR_02990 [Vibrio harveyi ATCC BAA-1116]
gi|156526855|gb|ABU71941.1| hypothetical protein VIBHAR_02990 [Vibrio harveyi ATCC BAA-1116]
Length = 293
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/97 (24%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Query: 59 YSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
+ A + L+ + ++ + L+ + D +++S +L RRA ++ +YF +
Sbjct: 192 DQLTKASKKRLAQIADYVRHNQDIDLVLVATYTDSTDGKSTSQSLSERRAESLRSYFESL 251
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G+S R++V YGK P KNRR ++ L
Sbjct: 252 GLSGERIQVQGYGKRRPIADNGSPIGKDKNRRVVISL 288
>gi|59714347|ref|YP_207122.1| outer membrane porin F [Vibrio fischeri ES114]
gi|197336792|ref|YP_002158803.1| outer membrane porin F [Vibrio fischeri MJ11]
gi|59482595|gb|AAW88234.1| outer membrane porin F [Vibrio fischeri ES114]
gi|197314044|gb|ACH63493.1| outer membrane porin F [Vibrio fischeri MJ11]
Length = 202
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 64/188 (34%), Gaps = 29/188 (15%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDS--------- 51
M+ S +I++++ + D + + D + + + D
Sbjct: 1 MKQSIYPLIIASLFLTGCVSGDKDYIETPTSDQIADLRDDDNDGVINARDICPGTPRGAQ 60
Query: 52 -------------------VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADE 91
+ F S I P + + + E + ++G A +
Sbjct: 61 IDNDGCAEYVEHSDKKDLKILFANDSSEISPIFKTEIRTMAEFLEEYPETSIQLQGFASQ 120
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
G+ +I L RA AV + G+ R++ +G + + G ++A NRR +
Sbjct: 121 QGNAEYNIRLSELRAAAVRVALIEYGVDPQRIETIGFGDTLLTAKGDSAVSHALNRRVVA 180
Query: 152 FLKGCRAN 159
+ G + +
Sbjct: 181 TVVGFKGD 188
>gi|332305765|ref|YP_004433616.1| peptidoglycan-associated lipoprotein [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332173094|gb|AEE22348.1| peptidoglycan-associated lipoprotein [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 185
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG------- 49
MQ S IF + L +TM++ S + + + + V + ++ +
Sbjct: 1 MQLSKIFKGITLALPIVTMVACSSGPSEEELAAERNRVAAAQAEADRKAEEAKVQAGNMK 60
Query: 50 -------------------DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHA 89
V+FD S+ +L ++ ++ +IEGH
Sbjct: 61 PMLSPEEVMQKEKSALMDDQVVYFDFDRSSVGSKYYALLDQHAAFLVKNPGQSVVIEGHC 120
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G+ +IALG RRA +V Y + G+SAS++ V SYG+E P A+A+NRR
Sbjct: 121 DSRGTPEYNIALGERRAKSVETYLMNAGVSASQVSVVSYGEEKPIDTSGTTAAFAENRRG 180
Query: 150 IVF 152
++
Sbjct: 181 VLV 183
>gi|237751470|ref|ZP_04581950.1| lipoprotein [Helicobacter bilis ATCC 43879]
gi|229372836|gb|EEO23227.1| lipoprotein [Helicobacter bilis ATCC 43879]
Length = 170
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 2/135 (1%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
SG N DT+ ++ + +++FD Y IR + ++++
Sbjct: 35 SGNSNGDTE-EEYAGNNEGTAYGDAIKVDSLTTIYFDFDRYDIRSDMKDYVRANADFIKE 93
Query: 79 HDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+ +++G+ DE G + ALGL+RA +V + V +G+ + SYG P
Sbjct: 94 KNIKAVVLQGNTDEFGGDEYNTALGLKRAISVRDALVLQGLPRNMFSTISYGMHKPVCRE 153
Query: 138 HDEDAYAKNRRAIVF 152
+ YAKNRR +
Sbjct: 154 KTAECYAKNRRTDIV 168
>gi|84684131|ref|ZP_01012033.1| OmpA domain protein [Maritimibacter alkaliphilus HTCC2654]
gi|84667884|gb|EAQ14352.1| OmpA domain protein [Rhodobacterales bacterium HTCC2654]
Length = 315
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 52/140 (37%), Gaps = 6/140 (4%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVF----FDTSSYSIRPADIQVLSNLGSW 75
+T + Q SVG V F+T S ++ L++L ++
Sbjct: 172 TSSKAETPETQTAVPQEALGDVGQAMESVGRYVLTDLRFETGSSALGDGTYDSLTDLAAY 231
Query: 76 LEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMP 133
L+ H + GH D G +++IA+ RRA +V V S +++ G P
Sbjct: 232 LKSHPTRRVALVGHTDAEGPLSANIAISKRRATSVLERLVTAHGVPSSQLEAEGIGYLSP 291
Query: 134 SVYGHDEDAYAKNRRAIVFL 153
++ NRR L
Sbjct: 292 LASNQSDEGRTFNRRVEAIL 311
>gi|300698137|ref|YP_003748798.1| transmembrane protein, OmpA/MotB motif [Ralstonia solanacearum
CFBP2957]
gi|299074861|emb|CBJ54429.1| putative transmembrane protein, OmpA/MotB motif [Ralstonia
solanacearum CFBP2957]
Length = 215
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 10/116 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLG----SWLEKHDCDFLIEGHADELGSRN----- 96
+ SV F +S ++P ++L +L ++L+ D ++ G AD+
Sbjct: 85 IGISGSVLFALNSDQLQPEGRELLKSLAGPLSAYLQSRDEILMVSGFADDQQVHAGNRRF 144
Query: 97 -SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ L +RA V + GI + + ++G E P D++ AKNRR +
Sbjct: 145 ADNWELSAKRALTVTRALIDAGIPGASVFAAAFGSEQPVGSNADDEGRAKNRRVEI 200
>gi|221638712|ref|YP_002524974.1| hypothetical protein RSKD131_0613 [Rhodobacter sphaeroides KD131]
gi|221159493|gb|ACM00473.1| OmpA/MotB domain protein [Rhodobacter sphaeroides KD131]
Length = 525
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 45/120 (37%), Gaps = 14/120 (11%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGS--------WLEKHDCDFLIEGHADE-----LGS 94
V F+ S + P +S + E D ++GH D G+
Sbjct: 403 FSSEVLFEPGSAELAPEGRAQISGVVQTLNEIRTQIPEGIDWIIRVDGHTDNVPLSGFGA 462
Query: 95 RNSSIALGLRRAYAVFNYFV-ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA +V + + G SR+ T +G+ P G DA A+NRR + L
Sbjct: 463 FRDNWELSSARALSVVRFMQQSLGFPPSRLAATGFGEYRPVTPGDSADARAQNRRIELKL 522
>gi|215919216|ref|NP_820613.2| ompA family protein [Coxiella burnetii RSA 493]
gi|206584100|gb|AAO91127.2| IcmN protein, OmpA family [Coxiella burnetii RSA 493]
Length = 212
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/169 (15%), Positives = 53/169 (31%), Gaps = 21/169 (12%)
Query: 7 FIILSAITMMSISGIDNLDTKIS--------------------SPDTVLNESSLQEQFSS 46
++ +++ + S + + + L E
Sbjct: 35 LLLALGMSLSACSSYTTVSSAPVYTIPAPKPSLAKIRAHYIHRLQADGVQVIKLGETMRF 94
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRR 105
+ F S ++R L L ++ +D + + + D G AL R+
Sbjct: 95 VLLSDCLFKPDSANLRSDYRPTLKALARLMKTYDKVNVQVAAYTDNNGHIERQQALTTRQ 154
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
A V ++ +RGI+A Y ++ P Y NRR + +
Sbjct: 155 AQVVASFLWSRGINARLAYAVGYNRKNPVDYNGSSHGRFNNRRVEISFR 203
>gi|153831593|ref|ZP_01984260.1| OmpA family protein [Vibrio harveyi HY01]
gi|148872103|gb|EDL70920.1| OmpA family protein [Vibrio harveyi HY01]
Length = 350
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
F ++ + L+ L S++ + L++GH D +GS+ +++ + +RA V
Sbjct: 212 FQFGQKTLSRSQQSTLAALYSYISVDDRVTKILVDGHTDNVGSQLANLNVSRQRAEQVAE 271
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V +G+ S ++V ++G P + + AKNRR + L
Sbjct: 272 ALVQQGVDRSLIEVRAHGSRYPIASNNTQAGQAKNRRVTLRL 313
>gi|238785957|ref|ZP_04629921.1| Outer membrane protein A [Yersinia bercovieri ATCC 43970]
gi|238713147|gb|EEQ05195.1| Outer membrane protein A [Yersinia bercovieri ATCC 43970]
Length = 350
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/158 (20%), Positives = 65/158 (41%), Gaps = 12/158 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + +S D + + + + ++ V F + +++P Q L
Sbjct: 185 GMLSVGVSYRFGQDDAVVPVAPAPAPAPVVDTKRFTLKSDVLFAFNKSTLKPEGQQALDQ 244
Query: 72 LGSW---LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L S ++ D ++ G AD +G ++AL RRA +V +Y V++GI A ++
Sbjct: 245 LYSQLSSIDPKDGSVVVLGFADRIGQPAPNLALSQRRADSVRDYLVSKGIPAEKITARGE 304
Query: 129 GKEMPSVYGHDE---------DAYAKNRRAIVFLKGCR 157
G+ P + + A +RR + +KG +
Sbjct: 305 GQANPVTGNTCDNVKPRAALIECLAPDRRVEIEVKGYK 342
>gi|325275196|ref|ZP_08141163.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51]
gi|324099683|gb|EGB97562.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51]
Length = 309
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNSSIALGLRRAYA 108
V F + A L + +++ + GH+D G+R ++ L RRA A
Sbjct: 176 QVGFPGGGIELDDAAKARLDVILEYMKADPSVNHVELNGHSDNSGNRLTNRDLSRRRALA 235
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V +YF A GI ++ V +G+ P + A+NRR + L
Sbjct: 236 VADYFKAHGIKDEQITVRFHGERYPVAKNNTAANRARNRRVNIEL 280
>gi|117921584|ref|YP_870776.1| OmpA/MotB domain-containing protein [Shewanella sp. ANA-3]
gi|117613916|gb|ABK49370.1| OmpA/MotB domain protein [Shewanella sp. ANA-3]
Length = 373
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 46/104 (44%), Gaps = 2/104 (1%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+ F S ++ + + L +++ + + I GHA +G ++ L +RA AV
Sbjct: 260 IQFANDSAVVKKEYYKDIERLANYMNKNPEFTVEIAGHASNVGKPEYNMVLSDKRADAVA 319
Query: 111 NYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V + + R+ YG P V G ++A+A NRR +
Sbjct: 320 KILVEKYGISQSRVTSNGYGITKPLVAGDSKEAHAANRRIEAIV 363
>gi|323700139|ref|ZP_08112051.1| OmpA/MotB domain protein [Desulfovibrio sp. ND132]
gi|323460071|gb|EGB15936.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans ND132]
Length = 241
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 56/137 (40%), Gaps = 7/137 (5%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL 84
+ + + L+ + Q+ + D + F + +++ L + + D
Sbjct: 103 EISKAELNDNLDVLAKQDGVALVFTDRILFAPGGSELSDTGKFLMARLVPMMTQTDAPIN 162
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY- 143
+ G+ D + + + L RA AV + V +G+ SR +++YG P + +E
Sbjct: 163 VAGYTDASDATQTPLELSGDRALAVLAFLVDKGVHDSRFSLSAYGDAFPVI---NELGRP 219
Query: 144 ---AKNRRAIVFLKGCR 157
+NRR + LK R
Sbjct: 220 VASPRNRRVEILLKTAR 236
>gi|284038953|ref|YP_003388883.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
gi|283818246|gb|ADB40084.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
Length = 285
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 41/107 (38%), Gaps = 3/107 (2%)
Query: 51 SVFFDTSSYS---IRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
++F T S + V + I GH D G+ ++ L RA
Sbjct: 177 QLYFPTGSTEHIVTPDNEQFVREAITYLYNHPTERLTITGHTDSTGTEAFNLKLSRLRAM 236
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
V + + +G S ++V + G ++P + + NRR + +K
Sbjct: 237 VVRDKLIKQGASKRWIQVIAMGNKLPIAPNNLPEGREANRRVTLLVK 283
>gi|49182348|gb|AAT57676.1| OmpA [Pasteurella multocida]
Length = 349
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 10/121 (8%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRR 105
++ V F ++PA VL + + + + G+ D LGS ++ L RR
Sbjct: 229 TLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSASVAVAGYTDRLGSDAYNLKLSQRR 288
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLKGC 156
A V NY VA+G++ + + T +G+ P A +RR + +KG
Sbjct: 289 ADTVANYLVAKGVAQNAISATGHGEANPVTGNKCDSVKGRKALIACLADDRRVEIAVKGN 348
Query: 157 R 157
+
Sbjct: 349 K 349
>gi|24375049|ref|NP_719092.1| OmpA family protein [Shewanella oneidensis MR-1]
gi|24349795|gb|AAN56536.1|AE015790_7 OmpA family protein [Shewanella oneidensis MR-1]
Length = 370
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 59/138 (42%), Gaps = 6/138 (4%)
Query: 22 DNLDTKISSPDT--VLNESSLQEQFSSSVGD--SVFFDTSSYSIRPADIQVLSNLGSWL- 76
D+ D ++P T V + + D S+ F S ++ + + L +++
Sbjct: 223 DDKDECPATPATHKVDSVGCTLYENVKKQEDVGSIQFANDSAVVKKEYYKDIERLANYMN 282
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSV 135
+ + I GHA +G ++ L +RA AV V + + R+ YG P V
Sbjct: 283 KNPEFTVEIAGHASNVGKPEYNMVLSDKRADAVAKILVEKYGISQSRVTSNGYGITKPLV 342
Query: 136 YGHDEDAYAKNRRAIVFL 153
G+ ++A+A NRR +
Sbjct: 343 AGNSKEAHAANRRIEAIV 360
>gi|329755860|gb|AEC04327.1| outer membrane protein A [Pasteurella multocida]
gi|329755868|gb|AEC04331.1| outer membrane protein A [Pasteurella multocida]
gi|329755870|gb|AEC04332.1| outer membrane protein A [Pasteurella multocida]
gi|329755872|gb|AEC04333.1| outer membrane protein A [Pasteurella multocida]
Length = 348
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 10/121 (8%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRR 105
++ V F ++PA VL + + + + G+ D LGS ++ L RR
Sbjct: 228 TLNTDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSASVAVAGYTDRLGSDAYNLKLSQRR 287
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLKGC 156
A V NY VA+G++ + + T +G+ P A +RR + +KG
Sbjct: 288 ADTVANYLVAKGVAQNAISATGHGEANPVTGNKCDSVKGRKALIACLADDRRVEIAVKGN 347
Query: 157 R 157
+
Sbjct: 348 K 348
>gi|302186190|ref|ZP_07262863.1| OmpA/MotB [Pseudomonas syringae pv. syringae 642]
Length = 447
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 51/148 (34%), Gaps = 7/148 (4%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVL 69
+ A + + L + ++ + + + + + F S + Q L
Sbjct: 304 IVAQSGFVAQTVQVLKVQPTAQMPA--DYQALARKAERLSVNFRFAQGSARLDNKAQQDL 361
Query: 70 SNLGSWLEKHD---CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT 126
+ +L+ D + G D + L RA AV + G++ +
Sbjct: 362 KRVADYLKSSDKLDRHVTLVGFGDAKSDPERAALLSRLRAMAVRRELLKSGVTFRDI--V 419
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G EMP +D KNRR V+++
Sbjct: 420 GLGDEMPVATNDIDDGRIKNRRVEVWVQ 447
>gi|78047693|ref|YP_363868.1| OmpA family protein [Xanthomonas campestris pv. vesicatoria str.
85-10]
gi|78036123|emb|CAJ23814.1| OmpA family membrane protein [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 438
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 42/113 (37%), Gaps = 5/113 (4%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG----SRNSSIAL 101
+ + F + S + ++L + + LE+ ++ GH D+ + AL
Sbjct: 322 VRLASASMFPSGSAELDADQTRLLERVAAALEQVPGRVVVVGHTDDQPVRSLRFKDNFAL 381
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV-YGHDEDAYAKNRRAIVFL 153
RRA +V A R++ + G P A+NRR + L
Sbjct: 382 SARRAQSVGAVLAAGLRDPRRVQTSGAGDSQPIALPPQLPGNRARNRRVEILL 434
>gi|114321978|ref|YP_743661.1| OmpA/MotB domain-containing protein [Alkalilimnicola ehrlichii
MLHE-1]
gi|114228372|gb|ABI58171.1| OmpA/MotB domain protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 362
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 44/124 (35%), Gaps = 12/124 (9%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIEGHADELG 93
E + F T+S + + L L + L + +EGH D
Sbjct: 236 EGDRFLFQSELLFATASADLGGEGREQLEGLATTLHELRGRIPDDLDWVLQVEGHTDRRP 295
Query: 94 S----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
S+ L RA + Y + +GI R+ + + P +A+A+NRR
Sbjct: 296 IRTAEFPSNWELSTARAQTIVRYLMDQGIPPERLAAAGFAEYHPVDDRDTPEAWARNRRI 355
Query: 150 IVFL 153
+ L
Sbjct: 356 ELRL 359
>gi|238749729|ref|ZP_04611234.1| Outer membrane protein A [Yersinia rohdei ATCC 43380]
gi|238712384|gb|EEQ04597.1| Outer membrane protein A [Yersinia rohdei ATCC 43380]
Length = 358
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F + +++P Q L L S ++ D ++ G AD +G ++AL
Sbjct: 228 TLKSDVLFAFNKSTLKPEGQQALDQLYSQLSSIDPKDGSVVVLGFADRIGQPAPNLALSQ 287
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE---------DAYAKNRRAIVFLK 154
RRA +V +Y V++GI A ++ G+ P + + A +RR + +K
Sbjct: 288 RRADSVRDYLVSKGIPADKITARGEGQANPVTGNTCDNVKPRAALIECLAPDRRVEIEVK 347
Query: 155 GCR 157
G +
Sbjct: 348 GYK 350
>gi|209363772|ref|YP_001423789.2| IcmN protein, OmpA family [Coxiella burnetii Dugway 5J108-111]
gi|212212032|ref|YP_002302968.1| IcmN protein, OmpA family [Coxiella burnetii CbuG_Q212]
gi|207081705|gb|ABS76937.2| IcmN protein, OmpA family [Coxiella burnetii Dugway 5J108-111]
gi|212010442|gb|ACJ17823.1| IcmN protein, OmpA family [Coxiella burnetii CbuG_Q212]
Length = 212
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/169 (15%), Positives = 53/169 (31%), Gaps = 21/169 (12%)
Query: 7 FIILSAITMMSISGIDNLDTKIS--------------------SPDTVLNESSLQEQFSS 46
++ +++ + S + + + L E
Sbjct: 35 LLLALGMSLSACSSYTTVSSAPVYTIPAPKPSLAKIRAHYIHRLQADGVQVIKLGETMRF 94
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRR 105
+ F S ++R L L ++ +D + + + D G AL R+
Sbjct: 95 VLLSDCLFKPDSANLRSDYRPTLKALARLMKTYDKVNVQVAAYTDNNGHIERQQALTTRQ 154
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
A V ++ +RGI+A Y ++ P Y NRR + +
Sbjct: 155 AQVVASFLWSRGINARLAYAVGYNRKNPVDYNGSSHGRFNNRRVEISFR 203
>gi|188533999|ref|YP_001907796.1| OmpA family protein [Erwinia tasmaniensis Et1/99]
gi|188029041|emb|CAO96909.1| OmpA family protein [Erwinia tasmaniensis Et1/99]
Length = 407
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 41/124 (33%), Gaps = 5/124 (4%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
L+ + + F ++ P +++ + S +E LI + D
Sbjct: 268 LDVTDGDYGNKIILPADSLFTYQGAALTPEGRALVARVASAMESRKGTLLIGVYTDNRLP 327
Query: 95 RNSS----IALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
+S A +A A+ N V ++ G V + + A+NRR
Sbjct: 328 HSSPFTSTYAYSAAQAEAISNMMVQLIAHPCITVRAEGRGDSRGRVPNNSAENRARNRRV 387
Query: 150 IVFL 153
+ L
Sbjct: 388 EITL 391
>gi|153006246|ref|YP_001380571.1| OmpA/MotB domain-containing protein [Anaeromyxobacter sp. Fw109-5]
gi|152029819|gb|ABS27587.1| OmpA/MotB domain protein [Anaeromyxobacter sp. Fw109-5]
Length = 274
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 49/131 (37%), Gaps = 2/131 (1%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-F 83
D + + + + +V F ++ L L L+
Sbjct: 144 DEQCQDGRCAARAPQASSECADAGAFTVRFGFDQANLTADSQGTLQKLADCLKATPAKRV 203
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
+ +G+ADE G+ ++ALG RRA + Y G+ + S+G+E E +
Sbjct: 204 VAQGYADERGTAQYNVALGNRRAESARKYLEDLGVGGKT-ETVSFGEENALCSEATESCW 262
Query: 144 AKNRRAIVFLK 154
+NRR ++
Sbjct: 263 EQNRRVEFQVE 273
>gi|90409122|ref|ZP_01217243.1| outer membrane protein A [Psychromonas sp. CNPT3]
gi|90309773|gb|EAS37937.1| outer membrane protein A [Psychromonas sp. CNPT3]
Length = 318
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 46/122 (37%), Gaps = 1/122 (0%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNS 97
+ L+ + ++ + FD + + + + ++ G+ D G
Sbjct: 197 APLEIVYLETIQSRILFDFAQTDLLLE-HDLDIAITRLTTYKKATVVLTGYTDNTGKETF 255
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
++ L +R ++ + RG+ AS++ G+ P + + NRR + L
Sbjct: 256 NLQLSKQRVQSIKKTLLDRGVQASQITEVYKGESDPIIGNDSREHRHLNRRVDILLPALN 315
Query: 158 AN 159
+N
Sbjct: 316 SN 317
>gi|54309732|ref|YP_130752.1| putative sodium-type flagellar protein MotY [Photobacterium
profundum SS9]
gi|46914170|emb|CAG20950.1| Putative sodium-type flagellar protein MotY [Photobacterium
profundum SS9]
Length = 296
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYAV 109
+ +D + + + L+ + ++ D L+ ++D G N + +L RRA +
Sbjct: 188 LHYDMDNDELNKPSQRRLAQITDFVRYSDDIDLVLLATYSDSTGGTNVNQSLSERRAKKL 247
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
YF++ G+ +R++V +YGK P KNRR ++ L
Sbjct: 248 EEYFMSLGLPKNRIQVEAYGKRRPIADNDTPIGRNKNRRVVISL 291
>gi|113971301|ref|YP_735094.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-4]
gi|113885985|gb|ABI40037.1| OmpA/MotB domain protein [Shewanella sp. MR-4]
Length = 372
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 46/104 (44%), Gaps = 2/104 (1%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+ F S ++ + + L ++ + + I GHA +G + ++ L +RA AV
Sbjct: 259 IQFANDSAVVKKEYYKDIERLANYLNKNPEFTVEIAGHASNVGKPDYNMTLSDKRADAVA 318
Query: 111 NYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V + + R+ YG P V G ++A+A NRR +
Sbjct: 319 KILVEKYGISQSRVTSNGYGITKPLVAGDSKEAHAANRRIEAIV 362
>gi|212219329|ref|YP_002306116.1| IcmN protein, OmpA family [Coxiella burnetii CbuK_Q154]
gi|212013591|gb|ACJ20971.1| IcmN protein, OmpA family [Coxiella burnetii CbuK_Q154]
Length = 212
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/169 (15%), Positives = 53/169 (31%), Gaps = 21/169 (12%)
Query: 7 FIILSAITMMSISGIDNLDTKIS--------------------SPDTVLNESSLQEQFSS 46
++ +++ + S + + + L E
Sbjct: 35 LLLALGMSLSACSSYTTVSSAPVYTIPAPKPSLAKIRAHYIHRLQADGVQVIKLGETMRF 94
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRR 105
+ F S ++R L L ++ +D + + + D G AL R+
Sbjct: 95 VLLSDCLFKPDSANLRSDYRPTLKALARLMKTYDKVNVQVAAYTDNNGHIERQQALTTRQ 154
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
A V ++ +RGI+A Y ++ P Y NRR + +
Sbjct: 155 AQVVASFLWSRGINARLAYAVGYNRKNPVDYNGSSHGRFNNRRVEISFR 203
>gi|37679728|ref|NP_934337.1| outer membrane protein [Vibrio vulnificus YJ016]
gi|37198473|dbj|BAC94308.1| outer membrane protein [Vibrio vulnificus YJ016]
Length = 226
Score = 62.9 bits (151), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 60/139 (43%), Gaps = 1/139 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
D S+ + + + S + V F S I P + + + +L+ +
Sbjct: 72 DLCPDTPSTAEIDNDGCGTYVKTSQQMQIRVLFANDSDKINPVFRKQIKEMSEFLKLYPS 131
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++G+A G+ ++ L RRA V + GI+ SR+++ +G + G DE
Sbjct: 132 TSIELQGYASRTGNAEHNLDLSKRRANNVREMLIGYGIAQSRVRIVGFGDSALANEGTDE 191
Query: 141 DAYAKNRRAIVFLKGCRAN 159
++A NRR + + G + +
Sbjct: 192 VSHALNRRVVASVVGYKGD 210
>gi|146985|gb|AAA24233.1| outer membrane protein II [Escherichia vulneris]
Length = 238
Score = 62.9 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L L + ++ D ++ G+ D +GS + L
Sbjct: 117 TLKSDVLFNFNKATLKPEGQQALDQLYTQLSNMDPKDGSAVVLGYTDRIGSEQYNQKLSE 176
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
+RA +V +Y VA+GI A+++ G+ P + A A +RR + +K
Sbjct: 177 KRAQSVVDYLVAKGIPANKISARGMGESDPVTGNTCDNVKARAALIDCLAPDRRVAIEVK 236
Query: 155 G 155
G
Sbjct: 237 G 237
>gi|298207484|ref|YP_003715663.1| OmpA family protein [Croceibacter atlanticus HTCC2559]
gi|83850120|gb|EAP87988.1| OmpA family protein [Croceibacter atlanticus HTCC2559]
Length = 626
Score = 62.9 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 50/110 (45%), Gaps = 4/110 (3%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
+ + + FD +I+P L L + + + +E H D G + +++L RRA
Sbjct: 514 ILNPILFDYDKSNIKPQAAFELDKLVQVMNKYPEMEIFVESHTDNKGPNDYNMSLSERRA 573
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSV---YGHDEDAYAKNRRAIVFL 153
+ Y V++GI+ R+ +G+ P+V ++ NRR+ +
Sbjct: 574 KSTVQYVVSKGIAKERISGKGFGESKPAVECGENCSDEQRQTNRRSEFVI 623
>gi|238919302|ref|YP_002932817.1| outer membrane protein A [Edwardsiella ictaluri 93-146]
gi|238868871|gb|ACR68582.1| outer membrane protein A [Edwardsiella ictaluri 93-146]
Length = 353
Score = 62.9 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/150 (20%), Positives = 64/150 (42%), Gaps = 12/150 (8%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW---L 76
G + + P + + E ++ V F+ + ++++ Q L L S +
Sbjct: 196 GQNEVAAPAPIPAPAPAPAPIVETKRFTLKSDVLFNFNKFTLKAEGRQALDQLYSQLSSM 255
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS-- 134
+ + ++ G+ D +GS ++ L +RA V +Y V++GI A+++ GK P
Sbjct: 256 DPKEGSVVVLGYTDRIGSDQYNLKLSKQRAQTVVDYLVSKGIPANKIAARGMGKADPVTG 315
Query: 135 VYGHDEDAY-------AKNRRAIVFLKGCR 157
+ A +RR ++ +KG +
Sbjct: 316 STCDNVKPRASLINCLAPDRRVVIEVKGTK 345
>gi|162455833|ref|YP_001618200.1| OmpA-like domain-containing protein [Sorangium cellulosum 'So ce
56']
gi|161166415|emb|CAN97720.1| OmpA-like outer membrane domain protein [Sorangium cellulosum 'So
ce 56']
Length = 689
Score = 62.9 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 57/127 (44%), Gaps = 3/127 (2%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH--DCDFLIEGHADELGS 94
S + E+ + + + + F T S I P ++ + L+ H ++GHADE +
Sbjct: 544 GSVVIEENNIVILEKIQFATGSAEILPESFGIVQAVAETLKHHPEFTMIEVQGHADERSA 603
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV-FL 153
++ L RA AV RG++ + ++ YG+ P H+ A+ KNRR +
Sbjct: 604 DAYNLKLTQARADAVAAALAQRGVNKNSVRSMGYGEYCPIDPAHNAAAWEKNRRVEFKVV 663
Query: 154 KGCRANT 160
+ + T
Sbjct: 664 RTDKGPT 670
>gi|332141875|ref|YP_004427613.1| flagellar motor protein MotB [Alteromonas macleodii str. 'Deep
ecotype']
gi|327551897|gb|AEA98615.1| flagellar motor protein MotB [Alteromonas macleodii str. 'Deep
ecotype']
Length = 309
Score = 62.9 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 49/128 (38%), Gaps = 6/128 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
D + SL +Q + + ++ F S ++P VL +G+ L + I GH+D
Sbjct: 166 DGSVEMESLGQQLTIRIRENGSFSAGSAFLQPQFQPVLRKIGTLLADVPGEIEISGHSDG 225
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDA-YAK 145
S+ L +RA AV SRM V P V A AK
Sbjct: 226 QHIANELYRSNWDLSSQRAVAVAEAMRTAPGFDESRMSVVGKADTAPIVENATTSADRAK 285
Query: 146 NRRAIVFL 153
NRR + +
Sbjct: 286 NRRVEINI 293
>gi|294146707|ref|YP_003559373.1| OmpA-family protein [Sphingobium japonicum UT26S]
gi|292677124|dbj|BAI98641.1| OmpA-family protein [Sphingobium japonicum UT26S]
Length = 288
Score = 62.9 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 46/142 (32%), Gaps = 3/142 (2%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ + ++ + +Q++ +V FDT + L + E
Sbjct: 143 TAQGFEEQTAATAALRGRMGEIDQYNVKSTTNVNFDTGKAVLSAQAKNDLCATAATAEGM 202
Query: 80 -DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS--RMKVTSYGKEMPSVY 136
+ L+ G+ D G + L +RA V NY + T + P
Sbjct: 203 SNALLLVVGYTDSTGDDEFNQELSEKRAGRVVNYLQQACGWKPYRMLTPTGMAEADPVAS 262
Query: 137 GHDEDAYAKNRRAIVFLKGCRA 158
+ A+NRR V + +
Sbjct: 263 NDTIEGKAQNRRVAVNILVSKG 284
>gi|307726202|ref|YP_003909415.1| type IV / VI secretion system protein, DotU family [Burkholderia
sp. CCGE1003]
gi|307586727|gb|ADN60124.1| type IV / VI secretion system protein, DotU family [Burkholderia
sp. CCGE1003]
Length = 445
Score = 62.9 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/127 (16%), Positives = 40/127 (31%), Gaps = 5/127 (3%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHA 89
+ + + + + F + + P +I +L + S L + ++ GH
Sbjct: 313 QSGALTVDEQSDGRDTIRLAAGALFPSGGADLAPDEIPLLRRVASALNQVRGRVIVVGHT 372
Query: 90 DELGSR----NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD-EDAYA 144
D+ + AL RA R++ G P D A
Sbjct: 373 DDQPVHSLRFKDNFALSTARAQNTLAVLAQGLDDPRRLEANGAGSSQPVATPADLPANRA 432
Query: 145 KNRRAIV 151
+NRR +
Sbjct: 433 RNRRVEI 439
>gi|209550830|ref|YP_002282747.1| hypothetical protein Rleg2_3254 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209536586|gb|ACI56521.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 343
Score = 62.9 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 39/102 (38%), Gaps = 5/102 (4%)
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG-----SRNSSIALGLRRAYAVFN 111
+ +L + + ++GH D + + L RA +V
Sbjct: 239 GQTEMGKLAAALLDLAKEIPPEINWVLRVDGHTDNVPLAGTGRYRDNWELSSARAISVVK 298
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +A+G+ A R+ +G+ P G DA A NRR + L
Sbjct: 299 FLIAQGVPADRLVAAGFGEFQPIAPGETPDARATNRRIELKL 340
>gi|332668116|ref|YP_004450904.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332336930|gb|AEE54031.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 662
Score = 62.9 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 48/109 (44%), Gaps = 5/109 (4%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
+++++D + IR L L L+ + H D G+ + +L +RA +
Sbjct: 552 ENIYYDLDKWDIRADAQPTLDKLAETLKLNPKVRIQLSSHTDCRGTDVYNESLSQKRAQS 611
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGH----DEDAYAKNRRAIVFL 153
+Y +++GI A R++ YG+ +P ED + NRR +
Sbjct: 612 AVDYLISKGIEAQRLEARGYGEGVPEATCACARCSEDEHQLNRRTAFRV 660
>gi|86157810|ref|YP_464595.1| OmpA/MotB family outer membrane protein [Anaeromyxobacter
dehalogenans 2CP-C]
gi|85774321|gb|ABC81158.1| outer membrane protein, OmpA/MotB family [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 259
Score = 62.9 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 49/130 (37%), Gaps = 6/130 (4%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
P V++ + + + + FFD ++RP + +L + + L +EGH D
Sbjct: 115 PVPVVSVLVEGRRLTVRLAATEFFDPGQAALRPQALAMLDAIAAELVPLARPLRVEGHTD 174
Query: 91 ELG-----SRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
E S+ L RA V Y A + + G P +A+
Sbjct: 175 ETPVGGGGRWISNWELSAARAATVVGYLEQAHAARPAGLSAVGLGSAHPLSTDATPEAHE 234
Query: 145 KNRRAIVFLK 154
+NRR + L+
Sbjct: 235 RNRRVELVLE 244
>gi|15639612|ref|NP_219062.1| hypothetical protein TP0624 [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189025850|ref|YP_001933622.1| hypothetical protein TPASS_0624 [Treponema pallidum subsp. pallidum
SS14]
gi|3322920|gb|AAC65597.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189018425|gb|ACD71043.1| hypothetical protein TPASS_0624 [Treponema pallidum subsp. pallidum
SS14]
gi|291059994|gb|ADD72729.1| OmpA family protein [Treponema pallidum subsp. pallidum str.
Chicago]
Length = 476
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 2/105 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKH--DCDFLIEGHADELGSRNSSIALGLRRAYA 108
V F +S I ++ + + + L+K FLIEGH +L AL + RA
Sbjct: 369 DVRFVANSPEILASEKDRVDVIATALKKMGPYTRFLIEGHTADLHRPQEEAALSVARAQR 428
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ RGI +R+ +G P AKNRR + +
Sbjct: 429 MAQELSRRGIEMTRITTAGHGATKPIAPSDTHANKAKNRRVEITI 473
>gi|163739042|ref|ZP_02146455.1| OmpA family protein [Phaeobacter gallaeciensis BS107]
gi|161387847|gb|EDQ12203.1| OmpA family protein [Phaeobacter gallaeciensis BS107]
Length = 183
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 4/100 (4%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FF T+ + I A Q L + + F+I GH D S ++ L RRA AV
Sbjct: 85 FFATNRHRISAAGQQRLRE--FFQTANARSFIITGHTDSRASDEYNMRLSQRRANAVAKV 142
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ + A ++ YG+ P V A+NRR +
Sbjct: 143 --GQSVGARILEARGYGERDPRVPNDSAANMAQNRRVEII 180
>gi|94967622|ref|YP_589670.1| OmpA/MotB family outer membrane protein [Candidatus Koribacter
versatilis Ellin345]
gi|94549672|gb|ABF39596.1| outer membrane protein, OmpA/MotB family [Candidatus Koribacter
versatilis Ellin345]
Length = 241
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/136 (30%), Positives = 63/136 (46%), Gaps = 1/136 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ S +Q + +++D +Y++R AD VL ++ ++H
Sbjct: 105 ATARVTVSGGGASQPDEISLSDQQAFAKYVKDIYYDYDAYTVRAADQAVLQANANFFKQH 164
Query: 80 D-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
F IEGH DE GS ++ALG RA A N V GI AS ++ SYGKE P
Sbjct: 165 PNIHFTIEGHCDERGSTEYNLALGDNRASAAKNAIVQAGIPASSVRTISYGKEKPFCTES 224
Query: 139 DEDAYAKNRRAIVFLK 154
+E + +NRRA +
Sbjct: 225 NEQCWQQNRRAHFVIS 240
>gi|56698003|ref|YP_168374.1| hypothetical protein SPO3171 [Ruegeria pomeroyi DSS-3]
gi|56679740|gb|AAV96406.1| OmpA domain protein [Ruegeria pomeroyi DSS-3]
Length = 766
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 44/126 (34%), Gaps = 14/126 (11%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE--------KHDCDFLIEGHADELG 93
E V FD S + P ++ + L + + ++GH D +
Sbjct: 638 EGDRFVFSSEVLFDPGSADLSPEGQFEIAKVARILRAIAADIPPEINWVIRVDGHTDNVP 697
Query: 94 -----SRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+ L RA +V Y + G+ R+ +G+ P +A A+NR
Sbjct: 698 LLGTGKYADNWELSQGRALSVVRYMVESLGLPPDRLSANGFGEYQPVNPADTAEARAQNR 757
Query: 148 RAIVFL 153
R + L
Sbjct: 758 RIELKL 763
>gi|163802824|ref|ZP_02196713.1| sodium-type flagellar protein MotY [Vibrio sp. AND4]
gi|159173364|gb|EDP58187.1| sodium-type flagellar protein MotY [Vibrio sp. AND4]
Length = 293
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Query: 59 YSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
+ + L+ + ++ + L+ + D +++S L RRA ++ YF +
Sbjct: 192 DQLTKTSKKRLAQIADYVRHNQDIDLVLVSTYTDSTDGKSTSQNLSERRAESLRTYFESL 251
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G+S R++V YGK P KNRR ++ L
Sbjct: 252 GLSEDRIQVQGYGKRRPIADNGSPIGKDKNRRVVISL 288
>gi|289665938|ref|ZP_06487519.1| OmpA family membrane protein [Xanthomonas campestris pv. vasculorum
NCPPB702]
Length = 438
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 5/113 (4%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG----SRNSSIAL 101
+ + F + S + +L + + LE+ ++ GH D+ S + AL
Sbjct: 322 VRLASASMFPSGSAELDADQTSLLERVAAALEQVPGRVVVVGHTDDQPVRSLSFKDNFAL 381
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV-YGHDEDAYAKNRRAIVFL 153
RRA +V A R++ + G P A+NRR + L
Sbjct: 382 SARRAESVGAVLAAGLRDRRRVQTSGAGDSQPIALPPQLPGNRARNRRVEILL 434
>gi|258624563|ref|ZP_05719502.1| outer membrane protein, putative [Vibrio mimicus VM603]
gi|262165799|ref|ZP_06033536.1| outer membrane protein [Vibrio mimicus VM223]
gi|262171367|ref|ZP_06039045.1| outer membrane protein [Vibrio mimicus MB-451]
gi|258583156|gb|EEW07966.1| outer membrane protein, putative [Vibrio mimicus VM603]
gi|261892443|gb|EEY38429.1| outer membrane protein [Vibrio mimicus MB-451]
gi|262025515|gb|EEY44183.1| outer membrane protein [Vibrio mimicus VM223]
Length = 212
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVF 110
+ F S I PA + + + +L+ + ++G+A ++G ++AL +R+ V
Sbjct: 91 ILFANDSSVIEPAFLTQIRQMAEFLQGYPSTSIELQGYASKVGRAEYNLALSKQRSETVR 150
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
+ + G++ +R+ + YG + G D+ ++A+NRR + G +
Sbjct: 151 DQLIRYGVAPNRVNIVGYGDSVLVAEGEDDISHARNRRVTATVVGYKG 198
>gi|322418514|ref|YP_004197737.1| OmpA/MotB domain-containing protein [Geobacter sp. M18]
gi|320124901|gb|ADW12461.1| OmpA/MotB domain protein [Geobacter sp. M18]
Length = 450
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 38/79 (48%)
Query: 75 WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
+ LIEGH D +G R S++ L +RA V N + G++ +++ + YG P
Sbjct: 366 MKANEESSALIEGHTDSVGDRQSNLNLSQQRAQNVKNELLKHGVAPAKVAIKGYGFSKPR 425
Query: 135 VYGHDEDAYAKNRRAIVFL 153
KNRRA+V L
Sbjct: 426 ASNKTNVGRQKNRRAVVTL 444
>gi|239628950|ref|ZP_04671981.1| chemotaxis motB protein [Clostridiales bacterium 1_7_47_FAA]
gi|239519096|gb|EEQ58962.1| chemotaxis motB protein [Clostridiales bacterium 1_7_47FAA]
Length = 277
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 44/133 (33%), Gaps = 5/133 (3%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGH 88
S + S+ + + + FD S S+R +L +G L++ + L
Sbjct: 109 DSENLDAIVSNSENAVFIRFKNDLLFDPDSASLRADSKSMLDAVGIMLKEKQDNILAVYI 168
Query: 89 ADEL----GSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAY 143
S + L RA V Y + ++ YGK P +
Sbjct: 169 NGHTAQAANSLINDRLLSSERADNVAIYLEDQVGFDPKKLICRGYGKYYPIADNATREGR 228
Query: 144 AKNRRAIVFLKGC 156
+NRR + + G
Sbjct: 229 EQNRRVDMIILGN 241
>gi|149202409|ref|ZP_01879382.1| hypothetical protein RTM1035_13818 [Roseovarius sp. TM1035]
gi|149144507|gb|EDM32538.1| hypothetical protein RTM1035_13818 [Roseovarius sp. TM1035]
Length = 586
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 41/111 (36%), Gaps = 6/111 (5%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS-----RNSSIALGL 103
G++ I + + +G E D ++GH D + + AL
Sbjct: 473 GEADLSAAGQSEIAKVAGILRNVIGDIPEGIDWVLQVDGHTDNVPIIEGARFADNWALSQ 532
Query: 104 RRAYAVFNYFV-ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA +V Y A G A R+ YG+ P A A+NRR + L
Sbjct: 533 ARALSVVRYLTGALGFPAGRLSANGYGEFQPVNPEDTPAARAQNRRIELKL 583
>gi|332667957|ref|YP_004450745.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332336771|gb|AEE53872.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 279
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 43/116 (37%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNS 97
E+ + +++ P L L + K + + GH D G +
Sbjct: 161 PETVEEVADGAIIRFPVNSTEKDYDPKVDAYLEKLAKRVAKTEERVELTGHTDNDGEADY 220
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ LG RA + + V G+ A + S G+ +P ++ NRR V L
Sbjct: 221 NLKLGASRARQIRDLLVKLGVKADLISTASKGETLPVAPNTTDENRHNNRRVEVRL 276
>gi|330824057|ref|YP_004387360.1| OmpA/MotB domain-containing protein [Alicycliphilus denitrificans
K601]
gi|329309429|gb|AEB83844.1| OmpA/MotB domain protein [Alicycliphilus denitrificans K601]
Length = 912
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 48/132 (36%), Gaps = 12/132 (9%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS----NLGSWLEKHDCDFLIE 86
+ + + SV F +S ++P Q+L L ++L + ++
Sbjct: 769 AGPLAAGRVTLQDGRIGISGSVLFAFNSDELQPEGRQLLRSLSAPLAAYLRERGEILMVS 828
Query: 87 GHADELGS--------RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
G D+ + L +RA V + GI ++++ ++G E
Sbjct: 829 GFTDDRPMRGGGGNARFADNWELSAQRALTVTRALIDEGIPSAQVFAAAFGAEQAVASNA 888
Query: 139 DEDAYAKNRRAI 150
D + A+NRR
Sbjct: 889 DAEGRARNRRVE 900
>gi|258621934|ref|ZP_05716964.1| outer membrane protein, putative [Vibrio mimicus VM573]
gi|258585872|gb|EEW10591.1| outer membrane protein, putative [Vibrio mimicus VM573]
Length = 212
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVF 110
+ F S I PA + + + +L+ + ++G+A ++G ++AL +R+ V
Sbjct: 91 ILFANDSSVIEPAFLTQIRQMAEFLQGYPSTSIELQGYASKVGRAEYNLALSKQRSETVR 150
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
+ + G++ +R+ + YG + G D+ ++A+NRR + G +
Sbjct: 151 DQLIRYGVAPNRVNIVGYGDSVLVAEGEDDISHARNRRVTATVVGYKG 198
>gi|114563951|ref|YP_751465.1| flagellar motor protein MotB [Shewanella frigidimarina NCIMB 400]
gi|114335244|gb|ABI72626.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400]
Length = 308
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 5/133 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
D + SL +Q + + F + S ++P ++ ++G L+ + GH D
Sbjct: 166 VDGAIEIESLGQQIIIRIREKGSFASGSGFLQPKFKPIVRSIGELLKDVPGIITVSGHTD 225
Query: 91 ----ELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+S+ L +RA AV + G SRMKV P V + A+
Sbjct: 226 GADINNELYSSNWELSSQRAVAVAHELRRVSGFDESRMKVVGEASNRPLVANDSNENQAR 285
Query: 146 NRRAIVFLKGCRA 158
NRR + ++ +A
Sbjct: 286 NRRVEISIEQGKA 298
>gi|254468321|ref|ZP_05081727.1| OmpA/MotB [beta proteobacterium KB13]
gi|207087131|gb|EDZ64414.1| OmpA/MotB [beta proteobacterium KB13]
Length = 165
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 70/165 (42%), Gaps = 19/165 (11%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSS------------- 47
M+ ++ + +T+ ++G + + + + +Q +
Sbjct: 1 MKK----LVFAGLTLALLAGCSSTPLEDAEAPSDAKAGVAADQTQTDDLGLDKLRSDSLL 56
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRA 106
S++FD + ++P + +++ + H ++GHAD GS ++ALG +R+
Sbjct: 57 TQRSIYFDFDKFEVKPEYLDIVNAHAQYAADHPAAKMTLKGHADYRGSHEYNLALGQKRS 116
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+V + G S +++ SYG+E + + +++RR +
Sbjct: 117 VSVKDVMNTSGASDGQIETVSYGEEEANQNCQGNEC-SQDRRVDI 160
>gi|45758047|gb|AAO85782.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
Length = 378
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 12/143 (8%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK---HDCDFLIE 86
E+ + + V FD S++PA L + + + +
Sbjct: 235 GQGAAPVEAPEVVTKNFAFSSDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVN 294
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV--YGHDEDAY- 143
G+ D +G S++ L RRA V NY V++GI+ + + YG+ P
Sbjct: 295 GYTDRIGKEASNLKLSQRRAETVANYIVSKGINPANVTAVGYGEANPVTGHTCDAVKGRK 354
Query: 144 ------AKNRRAIVFLKGCRANT 160
A +RR + ++G + T
Sbjct: 355 ALIACLAPDRRVEIQVQGSKEVT 377
>gi|70731289|ref|YP_261030.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
gi|68345588|gb|AAY93194.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
Length = 460
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 51/146 (34%), Gaps = 8/146 (5%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD-SVFFDT--SSYSIRPADIQVLS 70
+++ +G + + + +V F S S+ Q L+
Sbjct: 316 AIVAANGFIAQTVQAMRVAPGPQMPEAYQALTRQAQRLTVNFRFEEGSASLDNKARQDLN 375
Query: 71 NLGSWLEKH---DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
+ +L +H + + G D + L RA AV V G+ ++
Sbjct: 376 RVLDYLRQHGKMNRQVTLAGFGDAKNDPARAALLSKLRAMAVRRELVKSGVVFR--EIRG 433
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFL 153
+G E+P ++ KNRR V++
Sbjct: 434 FGAELPVAANSADEGRIKNRRVEVWV 459
>gi|56475929|ref|YP_157518.1| outer membrane protein [Aromatoleum aromaticum EbN1]
gi|56311972|emb|CAI06617.1| Bacterial outer membrane protein [Aromatoleum aromaticum EbN1]
Length = 238
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 46/122 (37%), Gaps = 10/122 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FD ++P L L + + ++ GH D LGS + L R
Sbjct: 117 IKLSADTLFDFDKAVLKPEGRSKLDQLAEQAKSVKLEVILAVGHTDRLGSDVYNQKLSER 176
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLKG 155
RA AV Y V +G+ A+R+ G+ P D+ +RR V + G
Sbjct: 177 RANAVKTYLVGKGVEANRIYTEGKGERQPVTGTTCSDKLGRKALIECLQPDRRVEVEVIG 236
Query: 156 CR 157
+
Sbjct: 237 TK 238
>gi|167589926|ref|ZP_02382314.1| hypothetical protein BuboB_31618 [Burkholderia ubonensis Bu]
Length = 215
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 53/142 (37%), Gaps = 10/142 (7%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG----SW 75
+ + + + +V F +S ++P ++L L ++
Sbjct: 58 AQQRKTLERALAGPLAAGRVTLVNGRIGIAGNVLFALNSDQLQPEGKELLKTLAGPLSAY 117
Query: 76 LEKHDCDFLIEGHADELGSRN------SSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
L+ D +I G AD+ + L +RA V F+ G+ A+ + ++G
Sbjct: 118 LKTRDEILMISGFADDQQVHAGNRLFADNWELSAKRALTVTRAFIDAGVPAASVFAAAFG 177
Query: 130 KEMPSVYGHDEDAYAKNRRAIV 151
E P D+ AKNRR +
Sbjct: 178 SEQPVSSNADDAGRAKNRRVEI 199
>gi|170693231|ref|ZP_02884391.1| type IV / VI secretion system protein, DotU family [Burkholderia
graminis C4D1M]
gi|170141761|gb|EDT09929.1| type IV / VI secretion system protein, DotU family [Burkholderia
graminis C4D1M]
Length = 446
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/127 (16%), Positives = 40/127 (31%), Gaps = 5/127 (3%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHA 89
+ + + + + F + + P +I +L + S L + ++ GH
Sbjct: 314 QSGALAVDEQADGRDTIRLAAGALFPSGGADLLPDEIPLLRRVASALNQVRGRVIVVGHT 373
Query: 90 DELGSR----NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD-EDAYA 144
D+ + AL RA R++ G P D A
Sbjct: 374 DDQPVHSLRFKDNFALSTARAQNTLAVLAQGLDDPRRLEANGAGSSQPIATPADLPANRA 433
Query: 145 KNRRAIV 151
+NRR +
Sbjct: 434 RNRRVEI 440
>gi|323496851|ref|ZP_08101888.1| sodium-type flagellar protein MotY [Vibrio sinaloensis DSM 21326]
gi|323318110|gb|EGA71084.1| sodium-type flagellar protein MotY [Vibrio sinaloensis DSM 21326]
Length = 293
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYA 108
+ +D +S + + L+ + ++ + L+ + D ++++S L RRA
Sbjct: 184 ILHYDRTSVELNKQSQKRLAQIAEYIRHNQDIDLVLVSTYTDAEDTKSASQNLSERRAEV 243
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ YF + G+ R++V YGK P +NRR ++ L
Sbjct: 244 LQEYFKSLGLPEDRIRVQGYGKRRPIDDNASPIGKDRNRRVVISL 288
>gi|27366007|ref|NP_761535.1| putative outer membrane protein [Vibrio vulnificus CMCP6]
gi|27362207|gb|AAO11062.1| putative outer membrane protein [Vibrio vulnificus CMCP6]
Length = 208
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 60/139 (43%), Gaps = 1/139 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
D S+ + + + S + V F S I P + + + +L+ +
Sbjct: 54 DLCPDTPSTAEIDNDGCGTYVKTSQQMQIRVLFANDSDKINPVFRKQIKEMSEFLKLYPS 113
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++G+A G+ ++ L RRA V + GI+ SR+++ +G + G DE
Sbjct: 114 TSIELQGYASRTGNAEHNLDLSKRRANNVREMLIGYGIAQSRVRIVGFGDSALANEGTDE 173
Query: 141 DAYAKNRRAIVFLKGCRAN 159
++A NRR + + G + +
Sbjct: 174 VSHALNRRVVASVVGYKGD 192
>gi|163741717|ref|ZP_02149107.1| OmpA family protein [Phaeobacter gallaeciensis 2.10]
gi|161384890|gb|EDQ09269.1| OmpA family protein [Phaeobacter gallaeciensis 2.10]
Length = 183
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 4/100 (4%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FF T+ + I A Q L + + F+I GH D S ++ L RRA AV
Sbjct: 85 FFATNRHRISAAGQQRLRE--FFQTANARSFIITGHTDSRASDEYNMRLSQRRANAVAKV 142
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ + A ++V YG+ P V A+NRR +
Sbjct: 143 --GQSVGARILEVRGYGERDPRVPNDSAANMAQNRRVEII 180
>gi|149375537|ref|ZP_01893307.1| flagellar motor protein MotB [Marinobacter algicola DG893]
gi|149360242|gb|EDM48696.1| flagellar motor protein MotB [Marinobacter algicola DG893]
Length = 305
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 45/132 (34%), Gaps = 5/132 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ + D +N + + V + F + S + +L + L + IE
Sbjct: 132 ETAIEDGRVNLTQDHHRIIVRVEEKGAFPSGSADLTWEFEGLLLEMADILVEIPGKLTIE 191
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGIS-----ASRMKVTSYGKEMPSVYGHDED 141
GH D++ R + A ++ SR+ VT P V +
Sbjct: 192 GHTDDVPIRTQRFYSNWDLSAARAAAVANALLAEGKLKPSRLAVTGLAYTEPRVPNTSSE 251
Query: 142 AYAKNRRAIVFL 153
AKNRR + +
Sbjct: 252 NRAKNRRVEIII 263
>gi|307293378|ref|ZP_07573224.1| OmpA/MotB domain protein [Sphingobium chlorophenolicum L-1]
gi|306881444|gb|EFN12660.1| OmpA/MotB domain protein [Sphingobium chlorophenolicum L-1]
Length = 291
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 46/142 (32%), Gaps = 3/142 (2%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ + ++ + +Q++ +V FDT + L S E
Sbjct: 146 TAQGFEEQTAATAALRGRMGEIDQYNVKSTTNVNFDTGKAVLSAQAKNDLCATASTAEGM 205
Query: 80 -DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS--RMKVTSYGKEMPSVY 136
+ L+ G+ D G + L +RA V NY + T K P
Sbjct: 206 SNALLLVVGYTDSTGGDEFNQELSEKRAGRVVNYLQQACGWKPYRMLTPTGMAKADPLAS 265
Query: 137 GHDEDAYAKNRRAIVFLKGCRA 158
+ A+NRR V + +
Sbjct: 266 NDTAEGKAQNRRVAVNILVSKG 287
>gi|123441891|ref|YP_001005874.1| outer membrane protein A [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122088852|emb|CAL11658.1| putative outer membrane porin A protein [Yersinia enterocolitica
subsp. enterocolitica 8081]
Length = 357
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F + +++P Q L L + ++ D ++ G AD +G ++AL
Sbjct: 227 TLKSDVLFAFNKSTLKPEGQQALDQLYAQLSSIDPKDGSVVVLGFADRIGQPAPNLALSQ 286
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE---------DAYAKNRRAIVFLK 154
RRA +V +Y V++GI A ++ G+ P + + A +RR + +K
Sbjct: 287 RRADSVRDYLVSKGIPADKITARGEGQANPVTGNTCDNVKPRAALIECLAPDRRVEIEVK 346
Query: 155 GCR 157
G +
Sbjct: 347 GYK 349
>gi|146301711|ref|YP_001196302.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
UW101]
gi|146156129|gb|ABQ06983.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
Length = 642
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 44/120 (36%), Gaps = 7/120 (5%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRNSSI 99
++ +FFD +R L+ + + IE H D + ++
Sbjct: 520 KDGLLKIKIGIIFFDLDKSDVRYDAAIELNKVVLLMSQYPSVVIKIESHTDSRANDQYNL 579
Query: 100 ALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGH-----DEDAYAKNRRAIVFL 153
L RRA A +Y +++GI+ R+ YG+ E + NRR+ +
Sbjct: 580 ELSDRRAKATRDYIISQGIAPERIESAIGYGETQLINNCSNGVPCTEAQHQMNRRSEFII 639
>gi|5833214|gb|AAD53408.1|AF133259_1 outer membrane protein PomA [Mannheimia haemolytica]
gi|45758045|gb|AAO85781.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
gi|45758049|gb|AAO85783.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
Length = 378
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 53/143 (37%), Gaps = 12/143 (8%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK---HDCDFLIE 86
E+ + + V FD S++PA L + + + +
Sbjct: 235 GQGAAPVEAPEVVTKNFAFSSDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVN 294
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV--YGHDEDAY- 143
G+ D +G S++ L RRA V NY V++G + + + YG+ P
Sbjct: 295 GYTDRIGKEASNLKLSQRRAETVANYIVSKGTNPANVTAVGYGEANPVTGHTCDAVKGRK 354
Query: 144 ------AKNRRAIVFLKGCRANT 160
A +RR + ++G + T
Sbjct: 355 ALIACLAPDRRVEIQVQGSKEVT 377
>gi|85375617|ref|YP_459679.1| peptidoglycan-associated protein [Erythrobacter litoralis HTCC2594]
gi|84788700|gb|ABC64882.1| peptidoglycan-associated protein [Erythrobacter litoralis HTCC2594]
Length = 367
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
VFF+ +I P +L+N + ++ ++ GHAD G + ++ L RR
Sbjct: 256 PYIVFFNWDESNITPEAATILNNAVTAYANCGTASVMLAGHADRSGPQTYNVGLSQRRNA 315
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+V Y RGI +R+ ++G+ P V D +NRR +
Sbjct: 316 SVREYLNGRGIPDARISSEAFGESQPRVPTADGVRELQNRRVEIT 360
>gi|85709639|ref|ZP_01040704.1| peptidoglycan-associated protein [Erythrobacter sp. NAP1]
gi|85688349|gb|EAQ28353.1| peptidoglycan-associated protein [Erythrobacter sp. NAP1]
Length = 370
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 1/105 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
VFFD I +L N + ++ ++ GH D GS ++ L RR
Sbjct: 259 PYIVFFDFDESVITADAATILDNAVTAYANCGTAAVMLAGHTDRSGSVTYNMGLAERRNA 318
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+V Y RGI R+ ++G+ P V D +NRR V
Sbjct: 319 SVRAYLTGRGIPDGRISSEAFGESQPRVPTADGVRELQNRRVEVT 363
>gi|289662480|ref|ZP_06484061.1| hypothetical protein XcampvN_05177 [Xanthomonas campestris pv.
vasculorum NCPPB702]
gi|289669716|ref|ZP_06490791.1| hypothetical protein XcampmN_14767 [Xanthomonas campestris pv.
musacearum NCPPB4381]
Length = 224
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 48/131 (36%), Gaps = 10/131 (7%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS----NLGSWLEKHDCDFLIE 86
+ + +V F +S ++P +VL L +L + ++
Sbjct: 70 AAPLAAGRVTLVDGRIGIRGNVLFAFNSDELQPEGREVLKSLAAPLAQYLRAREEILMVS 129
Query: 87 GHADELG------SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
G D+ + L +RA V +A G+ AS + ++G + P DE
Sbjct: 130 GFTDDRPVLGGNRRYADNWELSAQRALTVTRALIAEGVPASSVFAAAFGSQQPVDSNADE 189
Query: 141 DAYAKNRRAIV 151
AKNRR +
Sbjct: 190 ARRAKNRRVEI 200
>gi|322417797|ref|YP_004197020.1| hypothetical protein GM18_0255 [Geobacter sp. M18]
gi|320124184|gb|ADW11744.1| conserved repeat domain protein [Geobacter sp. M18]
Length = 2257
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 53/139 (38%), Gaps = 12/139 (8%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVF---FDTSSYSIRPADIQVLSNLGSWLEKHDCD-F 83
+++P+ S ++E+ S+ V F T + D + L L L + D +
Sbjct: 800 VAAPEVDNILSVVKEENQVSLPPVVLHPHFPTFGAELSGEDRKELDRLAELLRRFDINHI 859
Query: 84 LIEGHAD-------ELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSV 135
+ GH D ++ AL RA +V Y A + + +T G+ P
Sbjct: 860 EVTGHTDLVRIAPRSRNIYANNTALSFARARSVGRYLTAALHLPPESLDLTGRGEREPVA 919
Query: 136 YGHDEDAYAKNRRAIVFLK 154
E A+NRR V +
Sbjct: 920 SNGMEAGRAQNRRVEVKVS 938
>gi|152993615|ref|YP_001359336.1| hypothetical protein SUN_2037 [Sulfurovum sp. NBC37-1]
gi|151425476|dbj|BAF72979.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 232
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 52/137 (37%), Gaps = 2/137 (1%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
+G++N P+ L S+ D + F T S + + + +G L
Sbjct: 85 GTGVNNDPLAYLDPNQDLIVSNNGRYVKIMFRDRMMFPTGSSRLTSSASYKVGKVGKILR 144
Query: 78 KHDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
++ + + G D+ G + + L RA V + GI+ VT P V
Sbjct: 145 EYPQTIVQVAGFTDDRGGYDYNYRLSRNRAKTVSDRLYREGINNPS-YVTGCSYNKPLVP 203
Query: 137 GHDEDAYAKNRRAIVFL 153
+ E A NRR ++L
Sbjct: 204 NNSERNMALNRRVEIYL 220
>gi|126662906|ref|ZP_01733905.1| outer membrane protein, OmpA family [Flavobacteria bacterium BAL38]
gi|126626285|gb|EAZ96974.1| outer membrane protein, OmpA family [Flavobacteria bacterium BAL38]
Length = 321
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 50/131 (38%), Gaps = 9/131 (6%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
L + + S+ + + F++ S+++ + + LG + + LIEGH D
Sbjct: 177 GKGLTVTEKDGKVYVSMENKLLFESGSWTVGAEGKKAVKALGEVLGQNPEISVLIEGHTD 236
Query: 91 ELGSR-------NSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDA 142
++ L +RA A+ N + I + G+ P + +
Sbjct: 237 NDKITGTIGGGVENNWDLSTKRATAIVNILGENKAIDKKNLTAAGRGEFAPLMTNDSAEG 296
Query: 143 YAKNRRAIVFL 153
AKNRR + L
Sbjct: 297 KAKNRRIEIIL 307
>gi|115379571|ref|ZP_01466660.1| peptidoglycan-associated lipoprotein [Stigmatella aurantiaca
DW4/3-1]
gi|115363429|gb|EAU62575.1| peptidoglycan-associated lipoprotein [Stigmatella aurantiaca
DW4/3-1]
Length = 134
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
Query: 36 NESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGS 94
+ +S ++++ S ++RP + L L + I GH ELG+
Sbjct: 6 SVPDEDADGASLAFGPIYYELDSTTLRPESRETLERLAEALRRRPGARVTISGHTCELGT 65
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
++ALG RRA +Y V G+ + V SYG+E P+V G E+ +++NRR+ L
Sbjct: 66 TEYNLALGQRRAAMAKDYLVKLGVGPGNVAVVSYGEESPAVLGSGEEVWSRNRRSEFNLS 125
Query: 155 GCRA 158
+A
Sbjct: 126 VAQA 129
>gi|71281747|ref|YP_267714.1| ompA family protein [Colwellia psychrerythraea 34H]
gi|71147487|gb|AAZ27960.1| ompA family protein [Colwellia psychrerythraea 34H]
Length = 562
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 41/96 (42%), Gaps = 2/96 (2%)
Query: 58 SYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG 117
+L + + ++ G +D +G++ + L +RA +V +RG
Sbjct: 468 KELDNKGKRDLLRLVDFMEDHQSSRIVLMGFSDSVGAQVKNTHLSYQRAKSVELALTSRG 527
Query: 118 ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
I + V + G+ +P + ED +NRR V+L
Sbjct: 528 IPV--LAVEAMGEALPIANNNTEDGRKRNRRVEVWL 561
>gi|330995812|ref|ZP_08319709.1| OmpA family protein [Paraprevotella xylaniphila YIT 11841]
gi|329574542|gb|EGG56107.1| OmpA family protein [Paraprevotella xylaniphila YIT 11841]
Length = 242
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 56/136 (41%), Gaps = 11/136 (8%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW--LEKHDCDFLIE 86
++ + +++ + + + F+TSS ++ L+ S D D I+
Sbjct: 91 NAQVESVTDANGLQAVKVTFDSGILFNTSSSALSSNATASLAKFASTVLNVNKDMDVAIK 150
Query: 87 GHADEL--------GSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYG 137
G+ D S ++ L L+RA +V NY G+S++++ V G+ P
Sbjct: 151 GYTDNQGWKNSTAAQSVQKNMDLSLQRANSVSNYLKQCGVSSTQITSVEGLGEADPVADN 210
Query: 138 HDEDAYAKNRRAIVFL 153
+NRR V+L
Sbjct: 211 STAAGREQNRRVEVYL 226
>gi|266621919|ref|ZP_06114854.1| putative flagellar motor protein MotB [Clostridium hathewayi DSM
13479]
gi|288866392|gb|EFC98690.1| putative flagellar motor protein MotB [Clostridium hathewayi DSM
13479]
Length = 283
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/127 (16%), Positives = 37/127 (29%), Gaps = 5/127 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL-- 92
S + + + F S ++ +L LG L+ + +
Sbjct: 121 AVVSDSENAVYIRFKNDLLFAPDSAVLQENSKSMLDALGIMLKDRQDEIMAIYINGHTAQ 180
Query: 93 --GSRNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
S + L RA V Y ++ YGK P ++ NRR
Sbjct: 181 AANSLINDRLLSSERADNVAIYLEDHVGLEPKKLICRGYGKYYPIADNSTKEGRELNRRV 240
Query: 150 IVFLKGC 156
+ + G
Sbjct: 241 DMIILGN 247
>gi|329915272|ref|ZP_08276241.1| Flagellar motor rotation protein MotB [Oxalobacteraceae bacterium
IMCC9480]
gi|327544948|gb|EGF30290.1| Flagellar motor rotation protein MotB [Oxalobacteraceae bacterium
IMCC9480]
Length = 212
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 48/126 (38%), Gaps = 8/126 (6%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD----FLIEGH 88
+ + V F +S ++P Q+L+ L L+ + ++ G
Sbjct: 71 PLATGRITLNNGRIGISGQVLFGLNSDQLQPEGRQLLTTLVKPLQAYLTTRDELLMVSGF 130
Query: 89 ADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
D++ + L +RA V + G+ ++ + ++G E P D+ A A
Sbjct: 131 TDDISIRGGRFADNWELSAQRALTVTRALIDEGMPSAMVFAAAFGAEQPVSPNTDDAARA 190
Query: 145 KNRRAI 150
+NRR
Sbjct: 191 QNRRVE 196
>gi|120555939|ref|YP_960290.1| hypothetical protein Maqu_3029 [Marinobacter aquaeolei VT8]
gi|120325788|gb|ABM20103.1| OmpA/MotB domain protein [Marinobacter aquaeolei VT8]
Length = 217
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 50/129 (38%), Gaps = 9/129 (6%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD----FLIEG 87
D + + +V F+ +S ++ +VL +L L+ + ++ G
Sbjct: 70 DPLTKGLVTFRDGRIGISGNVLFELNSDQLQAEGEEVLESLIRPLQAYLEQHDELLMVSG 129
Query: 88 HADELGSR-----NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
D+L + L +RA V G+ R+ ++G P+V D ++
Sbjct: 130 FTDDLPMHPGNRYQDNWGLSAQRALTVTRTLTELGLPNDRVFAAAFGPHHPAVPNVDAES 189
Query: 143 YAKNRRAIV 151
A+NRR +
Sbjct: 190 RAQNRRVEI 198
>gi|149190367|ref|ZP_01868639.1| sodium-type flagellar protein MotY precursor [Vibrio shilonii AK1]
gi|148835746|gb|EDL52711.1| sodium-type flagellar protein MotY precursor [Vibrio shilonii AK1]
Length = 294
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYA 108
+ +D +S + L + ++ + L+ + D S+ S L +RA
Sbjct: 185 ILHYDRNSEQLNKTSQHRLEQIAEYVRYNQDIDLVLVSTYTDSSDSKGESQQLSDKRASI 244
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ +YF + G+ R++V YGK P AKN+R ++
Sbjct: 245 LQDYFQSLGLPKDRIQVQGYGKRRPVAENSSPIGKAKNQRVVI 287
>gi|296282485|ref|ZP_06860483.1| hypothetical protein CbatJ_02635 [Citromicrobium bathyomarinum
JL354]
Length = 305
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 53/149 (35%), Gaps = 3/149 (2%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL 72
M+ + ++ + + + + ++ +V+FDT Y + L +
Sbjct: 151 AAMIQRGTEQGFAEQTAATEALRGRVADIDNYNVKGTTNVYFDTGEYKLSGQAQAELCSA 210
Query: 73 GSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS--RMKVTSYG 129
+ + + L+ G+ D GS + L +RA V NY + + T
Sbjct: 211 AAQADQMDNALLLVVGYTDSTGSYEINQELSEKRAERVVNYLQQQCGWKPYRMLTPTGMA 270
Query: 130 KEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
+ P + +NRR V + +A
Sbjct: 271 QADPVADNSTDYGKQQNRRVAVNILVSKA 299
>gi|254447387|ref|ZP_05060853.1| OmpA/MotB domain protein [gamma proteobacterium HTCC5015]
gi|198262730|gb|EDY87009.1| OmpA/MotB domain protein [gamma proteobacterium HTCC5015]
Length = 204
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 51/130 (39%), Gaps = 9/130 (6%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD----FLIE 86
D + + + + ++ F +S ++ QVL +L L+ + ++
Sbjct: 62 ADPLASGRITFQDGRIGISGNLLFRINSADLQSGGNQVLQDLAEPLKVYLSQHDELLMVS 121
Query: 87 GHAD-----ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
G D E + L +RA V V +G+ R+ ++G P+V D
Sbjct: 122 GFTDDLSLHEDNLYRDNWGLSAQRALTVTRTLVEQGLPQDRLFAAAFGANAPTVPNRDAA 181
Query: 142 AYAKNRRAIV 151
+ AKNRR +
Sbjct: 182 SRAKNRRVEI 191
>gi|153838879|ref|ZP_01991546.1| outer membrane protein [Vibrio parahaemolyticus AQ3810]
gi|149747670|gb|EDM58584.1| outer membrane protein [Vibrio parahaemolyticus AQ3810]
Length = 205
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 54/138 (39%), Gaps = 1/138 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
D + + S + V F S I P + + L +L+++
Sbjct: 53 DLCPGTPLGAEIDNDGCGSYANSSQQMQIRVLFANDSDEINPVFAKQIRELSDFLKEYPS 112
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++G+A G ++ L RRA V + GI+ R+ + YG + + G DE
Sbjct: 113 TSIELQGYASRTGGSEHNLDLSKRRAENVRKALLQNGITPDRVTIVGYGDTVLATTGTDE 172
Query: 141 DAYAKNRRAIVFLKGCRA 158
++A NRR + G +
Sbjct: 173 VSHALNRRVTATVVGHKG 190
>gi|45758055|gb|AAO85786.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
Length = 372
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 53/143 (37%), Gaps = 12/143 (8%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK---HDCDFLIE 86
E+ + + V FD S++PA L + + + +
Sbjct: 229 GQGAAPVEAPEVVTKNFAFSSDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVN 288
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV--YGHDEDAY- 143
G+ D +G S++ L RRA V NY V++G + + + YG+ P
Sbjct: 289 GYTDRIGKEASNLKLSQRRAETVANYIVSKGTNPANVTAVGYGEANPVTGHTCDAVKGRK 348
Query: 144 ------AKNRRAIVFLKGCRANT 160
A +RR + ++G + T
Sbjct: 349 ALIACLAPDRRVEIQVQGSKEVT 371
>gi|261491959|ref|ZP_05988536.1| heat-modifiable outer membrane protein [Mannheimia haemolytica
serotype A2 str. BOVINE]
gi|45758053|gb|AAO85785.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
gi|261312426|gb|EEY13552.1| heat-modifiable outer membrane protein [Mannheimia haemolytica
serotype A2 str. BOVINE]
Length = 374
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 53/143 (37%), Gaps = 12/143 (8%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK---HDCDFLIE 86
E+ + + V FD S++PA L + + + +
Sbjct: 231 GQGAAPVEAPEVVTKNFAFSSDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVN 290
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV--YGHDEDAY- 143
G+ D +G S++ L RRA V NY V++G + + + YG+ P
Sbjct: 291 GYTDRIGKEASNLKLSQRRAETVANYIVSKGTNPANVTAVGYGEANPVTGHTCDAVKGRK 350
Query: 144 ------AKNRRAIVFLKGCRANT 160
A +RR + ++G + T
Sbjct: 351 ALIACLAPDRRVEIQVQGSKEVT 373
>gi|45758061|gb|AAO85789.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
Length = 373
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 53/143 (37%), Gaps = 12/143 (8%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK---HDCDFLIE 86
E+ + + V FD S++PA L + + + +
Sbjct: 230 GQGAAPVEAPEVVTKNFAFSSDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVN 289
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV--YGHDEDAY- 143
G+ D +G S++ L RRA V NY V++G + + + YG+ P
Sbjct: 290 GYTDRIGKEASNLKLSQRRAETVANYIVSKGTNPANVTAVGYGEANPVTGHTCDAVKGRK 349
Query: 144 ------AKNRRAIVFLKGCRANT 160
A +RR + ++G + T
Sbjct: 350 ALIACLAPDRRVEIQVQGSKEVT 372
>gi|45758051|gb|AAO85784.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
Length = 378
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 53/143 (37%), Gaps = 12/143 (8%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK---HDCDFLIE 86
E+ + + V FD S++PA L + + + +
Sbjct: 235 GQGAAPVEAPEVVTKNFAFSSDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVN 294
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV--YGHDEDAY- 143
G+ D +G S++ L RRA V NY V++G + + + YG+ P
Sbjct: 295 GYTDRIGKEASNLKLSQRRAETVANYIVSKGTNPANVTAVGYGEANPVTGHTCDAVKGRK 354
Query: 144 ------AKNRRAIVFLKGCRANT 160
A +RR + ++G + T
Sbjct: 355 ALIACLAPDRRVEIQVQGSKEVT 377
>gi|253990221|ref|YP_003041577.1| outer membrane protein A [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253781671|emb|CAQ84834.1| outer membrane protein a (outer membrane protein ii*) [Photorhabdus
asymbiotica]
Length = 366
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 13/123 (10%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGS---WLEKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F +S ++ L L + ++ L+ G+ D +G + L
Sbjct: 235 TLRSDVLFAFASSELKAEGKHTLDQLYTELAHIDPTQGKVLVLGYTDRIGKDVYNQKLSQ 294
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD---------EDAYAKNRRAIVFLK 154
+RA +V +Y V +GI A + +GK P G A +RR + ++
Sbjct: 295 KRAQSVVDYLVTKGIPAGSISAEGHGKANPV-TGSTCDKVLKPNLISCLAPDRRVEIEIQ 353
Query: 155 GCR 157
G +
Sbjct: 354 GTK 356
>gi|109898397|ref|YP_661652.1| OmpA/MotB [Pseudoalteromonas atlantica T6c]
gi|109700678|gb|ABG40598.1| OmpA/MotB [Pseudoalteromonas atlantica T6c]
Length = 366
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 56/142 (39%), Gaps = 8/142 (5%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRP-ADIQVLSNLGSW 75
+ + D ++ E S ++ + FD +S ++ V +
Sbjct: 224 ACANTPMNDKVDDKGCSIFTEES------KTMSLKIMFDNNSSKLKNIDSASVQEFVDFM 277
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPS 134
+ +IEG+A G+ ++ L + RA V Y VA+ A SR++ YG+
Sbjct: 278 RRYGTTNAVIEGYASAPGTDAYNMKLSVERAQNVRQYLVAQYNIAGSRLEAVGYGETKLL 337
Query: 135 VYGHDEDAYAKNRRAIVFLKGC 156
+ +A+ KNRR ++
Sbjct: 338 DSANTREAHQKNRRIEAYVTAT 359
>gi|217970135|ref|YP_002355369.1| OmpA/MotB domain protein [Thauera sp. MZ1T]
gi|217507462|gb|ACK54473.1| OmpA/MotB domain protein [Thauera sp. MZ1T]
Length = 232
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/157 (19%), Positives = 52/157 (33%), Gaps = 15/157 (9%)
Query: 15 MMSISGIDN----LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS 70
+ D D D++F D ++ L
Sbjct: 77 LPVGCACDKDIVPADKCTVKAAAAAPGPKPTADKVKLSADALF-DFDKAVLKAEGKAKLD 135
Query: 71 NLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
L + + + ++ GH D LGS + L RRA AV Y V++G+ A+R+ G
Sbjct: 136 QLAAQAKSLKLEVILAVGHTDRLGSNTYNQRLSERRAAAVKTYLVSKGVDANRVYTEGKG 195
Query: 130 KEMPSVYGHDED--AYAK-------NRRAIVFLKGCR 157
+ P + A +RR V + G +
Sbjct: 196 ETQPVTGNKCDKVGGRAAQISCLQPDRRVEVEVIGSK 232
>gi|110635517|ref|YP_675725.1| hypothetical protein Meso_3188 [Mesorhizobium sp. BNC1]
gi|110286501|gb|ABG64560.1| OmpA/MotB [Chelativorans sp. BNC1]
Length = 343
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 39/102 (38%), Gaps = 5/102 (4%)
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG-----SRNSSIALGLRRAYAVFN 111
+R +L + + ++GH D + + L RA AV
Sbjct: 239 GQEEMRKLAGAILELQREIPPEINWVLRVDGHTDNIPLSGTGRFRDNWELSTARAVAVVK 298
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ + G+ A R+ +G+ P + +A ++NRR + L
Sbjct: 299 FLIESGVPAERLVAAGFGEFQPLDPENTTEARSRNRRIELKL 340
>gi|218666977|ref|YP_002427062.1| OmpA family protein [Acidithiobacillus ferrooxidans ATCC 23270]
gi|218519190|gb|ACK79776.1| OmpA family protein [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 183
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/172 (20%), Positives = 63/172 (36%), Gaps = 21/172 (12%)
Query: 1 MQYSTIFIILSAITMMSISGID----------------NLDTKISSPDTVLNESSLQEQF 44
M+ S ++L A ++ + K +P + E F
Sbjct: 1 MKKSAYQLLLLAGASFGLAACAPVHYHYCDLNCWHKPKPVPVKPVAPPPPAKIIAPVEHF 60
Query: 45 SSSVG----DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADELGSRNSSI 99
V F T+S + ADI VL + + KH L ++G+ + GS ++
Sbjct: 61 VLQSKPVTIRGVNFTTNSSKLMTADIAVLDSAARFALKHPTAILLVKGYCSKTGSYKYNL 120
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
L RA +V +Y + RG+ R+ Y E P + N+R ++
Sbjct: 121 GLSQERAASVAHYLMGRGVPNYRIITRGYSWEDPVASNATREGRFLNQRVVI 172
>gi|205374484|ref|ZP_03227280.1| flagellar motor protein MotS [Bacillus coahuilensis m4-4]
Length = 211
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 36/119 (30%), Gaps = 5/119 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ V S + + + V F + + I L + L IEGH D
Sbjct: 88 NDVAVASRTERGVVLVLQEQVLFQSGNAVIISDAYPFLDKVAELLSSIPNMIKIEGHTDN 147
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAK 145
S+ L R+ V YF++ +R YG P + K
Sbjct: 148 RPISTSVFPSNWELSAARSSGVIRYFISNHQLDPTRFIAVGYGDTRPLAPNDSAENLQK 206
>gi|332162167|ref|YP_004298744.1| outer membrane protein A [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|318606220|emb|CBY27718.1| outer membrane protein A precursor [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325666397|gb|ADZ43041.1| outer membrane protein A [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 357
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F + +++P Q L L + ++ D ++ G AD +G ++AL
Sbjct: 227 TLKSDVLFAFNKSTLKPEGQQALDQLYAQLSSIDPKDGSVVVLGFADRIGQPAPNLALSQ 286
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE---------DAYAKNRRAIVFLK 154
RRA +V +Y V++GI A ++ G+ P + + A +RR + +K
Sbjct: 287 RRADSVRDYLVSKGIPADKITARGEGQANPVTGNTCDNVKPRAALIECLAPDRRVEIEVK 346
Query: 155 GCR 157
G +
Sbjct: 347 GYK 349
>gi|107103038|ref|ZP_01366956.1| hypothetical protein PaerPA_01004107 [Pseudomonas aeruginosa PACS2]
Length = 314
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 38/74 (51%)
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++GH+D G+R ++ L RRA AV Y + G+ S++ V YG+ P V +
Sbjct: 200 NRIELDGHSDNSGNRLTNRDLSRRRALAVQEYLKSNGVPESQINVRFYGERYPLVANNSA 259
Query: 141 DAYAKNRRAIVFLK 154
A+NRR V L
Sbjct: 260 ANRARNRRVTVHLS 273
>gi|311696332|gb|ADP99205.1| OmpA/MotB domain protein [marine bacterium HP15]
Length = 146
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
+ + +S+ DI L ++L++H I GH+D GS + + L RA AV
Sbjct: 39 HYGFNKHSLDKDDIAFLQQHAAYLKEHPSVSVRIHGHSDNFGSEDYNQFLSRLRANAVAR 98
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ G+ SR+ + +G P + A NRR +
Sbjct: 99 SLIQEGVEESRILMRHWGSARPLA---TPEDRAANRRVEL 135
>gi|260363437|ref|ZP_05776283.1| outer membrane protein [Vibrio parahaemolyticus K5030]
gi|260876568|ref|ZP_05888923.1| outer membrane protein [Vibrio parahaemolyticus AN-5034]
gi|260895072|ref|ZP_05903568.1| outer membrane protein [Vibrio parahaemolyticus Peru-466]
gi|308086012|gb|EFO35707.1| outer membrane protein [Vibrio parahaemolyticus Peru-466]
gi|308093570|gb|EFO43265.1| outer membrane protein [Vibrio parahaemolyticus AN-5034]
gi|308113744|gb|EFO51284.1| outer membrane protein [Vibrio parahaemolyticus K5030]
gi|328473927|gb|EGF44744.1| putative outer membrane protein [Vibrio parahaemolyticus 10329]
Length = 205
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 54/138 (39%), Gaps = 1/138 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
D + + S + V F S I P + + L +L+++
Sbjct: 53 DLCPGTPLGAEIDNDGCGSYANSSQQMQIRVLFANDSDEINPVFAKQIRELSDFLKEYPS 112
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++G+A G ++ L RRA V + GI+ R+ + YG + + G DE
Sbjct: 113 TSIELQGYASRTGGSEHNLDLSKRRAENVRKALLQNGITPDRVTIVGYGDTVLATTGTDE 172
Query: 141 DAYAKNRRAIVFLKGCRA 158
++A NRR + G +
Sbjct: 173 VSHALNRRVTATVVGHKG 190
>gi|134292796|ref|YP_001116532.1| hypothetical protein Bcep1808_4087 [Burkholderia vietnamiensis G4]
gi|134135953|gb|ABO57067.1| OmpA/MotB domain protein [Burkholderia vietnamiensis G4]
Length = 214
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 52/142 (36%), Gaps = 10/142 (7%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS----NLGSW 75
+ + + + +V F +S ++PA +L L ++
Sbjct: 58 AQQRASLEQALAGPLAAGRVTLVNGRIGISGNVLFALNSDQLQPAGRDLLKTLAGPLAAY 117
Query: 76 LEKHDCDFLIEGHADELGS------RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
L+ D ++ G AD+ + L +RA V + G+ A + ++G
Sbjct: 118 LKTRDEILMVSGFADDQQVRAGNRLFADNWELSAKRALTVTRALIDAGVPAPSVFAAAFG 177
Query: 130 KEMPSVYGHDEDAYAKNRRAIV 151
+ P D++ AKNRR +
Sbjct: 178 SQQPVSSNADDEGRAKNRRVEI 199
>gi|302387785|ref|YP_003823607.1| OmpA/MotB domain protein [Clostridium saccharolyticum WM1]
gi|302198413|gb|ADL05984.1| OmpA/MotB domain protein [Clostridium saccharolyticum WM1]
Length = 262
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 46/124 (37%), Gaps = 11/124 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI------EGHADELGSRNSSI 99
S D VFFD S +R VL+ + + + + D N
Sbjct: 119 ISFRDKVFFDGDSSVLRQEGKDVLTQFAAAMSQANKSIKEVQVLGHTSQGDPQRPNNIRN 178
Query: 100 AL--GLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
+R+ V Y ++ +S ++ S+G+ P E+ A+NRR + +
Sbjct: 179 DRMLSAQRSAEVIIYLQSQNAVSPEKLVGMSFGQFRPIAQFDTEEGRAQNRRVEILI--T 236
Query: 157 RANT 160
+ +T
Sbjct: 237 KNDT 240
>gi|284007554|emb|CBA73076.1| outer membrane protein A [Arsenophonus nasoniae]
Length = 353
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 62/143 (43%), Gaps = 12/143 (8%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG---SWLEKHDCDFLIE 86
++ + E ++ V F+ + ++++PA L L + L+ ++
Sbjct: 208 PAPVIVPAPAPIENKRFTLRSDVLFEFNKHTLKPAGKVELDKLYSELTNLDPTQGRVMVL 267
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYA 144
G+ D +GS + + L +RA+ V +Y +++GI A+ + G+E P ++ A
Sbjct: 268 GYTDRIGSPSYNKPLSQKRAHEVMSYLISKGIPANAISSQGRGEENPVTGSTCNNVKPRA 327
Query: 145 K-------NRRAIVFLKGCRANT 160
+RR + ++G T
Sbjct: 328 ALINCLAPDRRVEIEIQGTTEVT 350
>gi|298206940|ref|YP_003715119.1| putative flagellar motor protein MotB [Croceibacter atlanticus
HTCC2559]
gi|83849574|gb|EAP87442.1| putative flagellar motor protein MotB [Croceibacter atlanticus
HTCC2559]
Length = 321
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 47/140 (33%), Gaps = 7/140 (5%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKH 79
L + S+ + + F++ S+++ + ++ LG
Sbjct: 168 TAVSSALGDFEGKGLTVEQRNGKVYVSMENKLLFNSGSWAVGSEGRRAVNQLGEVLASNP 227
Query: 80 DCDFLIEGHADELGSR-----NSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMP 133
D LIEGH D + + L +RA ++ N I + G+ +P
Sbjct: 228 DIAVLIEGHTDNVPYGGNGPLQDNWDLSTKRATSIVNILRENSQIDPQNLTAAGRGEYLP 287
Query: 134 SVYGHDEDAYAKNRRAIVFL 153
AKNRR V L
Sbjct: 288 IASNDSATGKAKNRRIEVIL 307
>gi|45758059|gb|AAO85788.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
Length = 372
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 53/143 (37%), Gaps = 12/143 (8%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK---HDCDFLIE 86
E+ + + V FD S++PA L + + + +
Sbjct: 229 GQGAAPVEAPEVVTKNFAFSSDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVN 288
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV--YGHDEDAY- 143
G+ D +G S++ L RRA V NY V++G + + + YG+ P
Sbjct: 289 GYTDRIGKEASNLKLSQRRAETVANYIVSKGTNPANVTAVGYGEANPVTGHTCDAVKGRK 348
Query: 144 ------AKNRRAIVFLKGCRANT 160
A +RR + ++G + T
Sbjct: 349 ALIACLAPDRRVEIQVQGSKEVT 371
>gi|73542264|ref|YP_296784.1| OmpA/MotB [Ralstonia eutropha JMP134]
gi|72119677|gb|AAZ61940.1| OmpA/MotB [Ralstonia eutropha JMP134]
Length = 218
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 49/122 (40%), Gaps = 9/122 (7%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FD ++P L +L S L+ + +I GH D GS + L +R
Sbjct: 95 VTFAADTLFDFDKAVLKPEGKAKLDDLVSKLQGITLEVIIAVGHTDSFGSDKYNDRLSIR 154
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVY------GHDE--DAYAKNRRAIVFLKGC 156
RA +V Y V++G+ A+R+ GK V NRR V + G
Sbjct: 155 RAESVKAYLVSKGVEANRVYTEGKGKRQLKVDPKSCKGNRTAQIACQQPNRRVEVEVVGT 214
Query: 157 RA 158
R+
Sbjct: 215 RS 216
>gi|86141364|ref|ZP_01059910.1| putative flagellar motor protein MotB [Leeuwenhoekiella blandensis
MED217]
gi|85831923|gb|EAQ50378.1| putative flagellar motor protein MotB [Leeuwenhoekiella blandensis
MED217]
Length = 276
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 57/148 (38%), Gaps = 8/148 (5%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
++T+ ++ + ++ D +N S+ D + F++ + + +VL
Sbjct: 113 SVTLALVTSLKGAIGNLNDEDIEINVEKGVVY--VSISDKLLFNSGRWDVTNRAKEVLGK 170
Query: 72 LGSWLEKHD-CDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARG-ISASRMKV 125
+ + ++ +F++EGH D + L ++RA +V + RM
Sbjct: 171 VATVVKNKPDIEFMVEGHTDSQPISTSVIEDNWDLSVKRATSVVRILQEEFGVPPERMVA 230
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+P + A+NRR + +
Sbjct: 231 AGRSYYVPLASNDTAEGRARNRRTRIVV 258
>gi|218886185|ref|YP_002435506.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218757139|gb|ACL08038.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 241
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 43/127 (33%), Gaps = 6/127 (4%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
P S+ V V F S + P +VL + L +++ ++ GH+D
Sbjct: 101 PQNASGISADDVGVLLRVNSDVMFKAGSAELVPEGSRVLDEVIKILREYNLYLMVRGHSD 160
Query: 91 ELGSRNSSIALGLR------RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
S A AV GI +R++ +Y P ++ +
Sbjct: 161 SGEVAAGSPYPSNWELSGARAAAAVRYIIEHGGIKPTRLRGIAYADTRPMEPNTTPESRS 220
Query: 145 KNRRAIV 151
KNRR
Sbjct: 221 KNRRVEF 227
>gi|305665788|ref|YP_003862075.1| OmpA family protein [Maribacter sp. HTCC2170]
gi|88710554|gb|EAR02786.1| OmpA family protein [Maribacter sp. HTCC2170]
Length = 827
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 60/145 (41%), Gaps = 11/145 (7%)
Query: 20 GIDNLDTKISSPDTVL----NESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
G+ D ++ + + L ++++ + ++FD IR + L L
Sbjct: 680 GVSTKDNEVVNTEVALRRLKEMIAVEDGIRKLKTEMIYFDFDKSYIRKDASEELDKLVQV 739
Query: 76 LEKHDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMP 133
+ ++ + IE H D G+R + L +RA + Y +++GI A+R+ YG+E
Sbjct: 740 MTEYPTMVIKIESHTDSRGARVYNKYLSEKRAKSTRAYIISKGIDANRIQSAIGYGEERL 799
Query: 134 SVYGH-----DEDAYAKNRRAIVFL 153
E + NRR+ +
Sbjct: 800 INGCDGSVRCSEANHLLNRRSEFII 824
>gi|238754341|ref|ZP_04615697.1| Outer membrane protein A [Yersinia ruckeri ATCC 29473]
gi|238707374|gb|EEP99735.1| Outer membrane protein A [Yersinia ruckeri ATCC 29473]
Length = 355
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F + +++P Q L L S ++ D ++ G AD +G ++ L
Sbjct: 225 TLKSDVLFAFNKATLKPEGQQALDQLYSQLSSIDPKDGSVVVLGFADRIGQAAPNLKLSE 284
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE---------DAYAKNRRAIVFLK 154
RA +V Y VA+GI A ++ G+ P + + A +RR + +K
Sbjct: 285 NRARSVVEYLVAKGIPADKISARGMGQADPVTGNTCDNVKPRAALIECLAPDRRVEIEVK 344
Query: 155 GCR 157
G +
Sbjct: 345 GIK 347
>gi|226227699|ref|YP_002761805.1| putative outer membrane protein [Gemmatimonas aurantiaca T-27]
gi|226090890|dbj|BAH39335.1| putative outer membrane protein [Gemmatimonas aurantiaca T-27]
Length = 233
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 45/120 (37%), Gaps = 4/120 (3%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD--CDFLIEGHADELGSRNSSIALG 102
+ V F ++R D L + H +EG +D GS ++ L
Sbjct: 104 AVKFAMPVHFGFDDAAVRQEDQAALEKFAQVAQSHYPGATITVEGFSDPAGSAAYNLRLS 163
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH--DEDAYAKNRRAIVFLKGCRANT 160
RA AV ++ V +G+ + ++ YGK G DE NRR ++ T
Sbjct: 164 RERADAVRDFLVTKGMDGAALRTVGYGKARLVRPGAKGDESGAELNRRVTFVIESSGGTT 223
>gi|332291582|ref|YP_004430191.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332169668|gb|AEE18923.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 327
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/129 (24%), Positives = 49/129 (37%), Gaps = 7/129 (5%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
L + S+ + + FD+ S+++ + + LGS + D LIEGH D
Sbjct: 184 GKGLTVEQRDGKVYVSLENKLLFDSGSWTVGANGTKAVKQLGSVLADNPDIAVLIEGHTD 243
Query: 91 ELGSRNS-----SIALGLRRAYAVFNYFV-ARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+ S + L +RA A+ R I + G+ P + A
Sbjct: 244 NVPYGGSGNLAGNWDLSAKRATAIVEILRTNRDIDPKNLTAAGRGEYAPVAENDTAENKA 303
Query: 145 KNRRAIVFL 153
KNRR V L
Sbjct: 304 KNRRIEVIL 312
>gi|260574902|ref|ZP_05842904.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
gi|259022907|gb|EEW26201.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
Length = 328
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 3/138 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
D + + +TV + L+ S ++ D VF + + ++ L L +L+ H
Sbjct: 192 DPVPAAEAPAETVDLGNRLETGGSLALDDLVFS-SGTAALAEGSYASLQALADYLKAHPD 250
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHD 139
+ GH D G +IAL +RA +V + G+ A+++ G +P
Sbjct: 251 RAIAVVGHTDASGPLAVNIALSRKRAASVRQVLIDSLGVPATQVIAEGVGFLVPRASNLT 310
Query: 140 EDAYAKNRRAIVFLKGCR 157
E A+NRR V L +
Sbjct: 311 EAGRAQNRRVEVMLTSTQ 328
>gi|260768773|ref|ZP_05877707.1| putative sodium-type flagellar protein MotY precursor [Vibrio
furnissii CIP 102972]
gi|260616803|gb|EEX41988.1| putative sodium-type flagellar protein MotY precursor [Vibrio
furnissii CIP 102972]
Length = 254
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 31/78 (39%)
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+ I GH+D G ++++ RRA V + + G+ M++ G P
Sbjct: 174 FDPKIKTVRITGHSDSHGDTVVNLSVSRRRADDVAYWMMMAGVPTEMMEIRGQGGRYPVA 233
Query: 136 YGHDEDAYAKNRRAIVFL 153
E+ NRR + L
Sbjct: 234 NNATEEGRLANRRVEIEL 251
>gi|325982085|ref|YP_004294487.1| OmpA/MotB domain-containing protein [Nitrosomonas sp. AL212]
gi|325531604|gb|ADZ26325.1| OmpA/MotB domain protein [Nitrosomonas sp. AL212]
Length = 225
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 58/149 (38%), Gaps = 10/149 (6%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
D + + + FD S ++P IQ L+ + +E
Sbjct: 77 CDPDLVKKPEVVAEAPAPAPVKTAPEKITFSADALFDFDSSKLKPNGIQSLNEFVTGIEG 136
Query: 79 HDCDFLI-EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
D +I G+AD +GS + AL LRRA +V ++ V+RGI S + V G+ P
Sbjct: 137 VKYDLIIAVGYADRIGSDEYNKALSLRRAESVKSHLVSRGIDPSLIFVDGKGEANPVTGN 196
Query: 138 HDE---------DAYAKNRRAIVFLKGCR 157
+ A +RR + + G R
Sbjct: 197 SCAGERKSKALIECLAPDRRVEIEVAGTR 225
>gi|332992377|gb|AEF02432.1| flagellar motor protein MotB [Alteromonas sp. SN2]
Length = 309
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 48/135 (35%), Gaps = 6/135 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
D + SL +Q + + ++ F S ++P +L +G L + I GH+D
Sbjct: 166 DGAVELESLGQQLTIRIRENGSFSAGSAFLQPQFQPILRKIGVLLADVPGEIEISGHSDG 225
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMP-SVYGHDEDAYAK 145
S+ L +RA AV SRM V P A+
Sbjct: 226 QHIANELYRSNWDLSSQRAVAVAEAMRTAPGFDESRMSVVGKADTDPMVEDATTPADRAR 285
Query: 146 NRRAIVFLKGCRANT 160
NRR + + + T
Sbjct: 286 NRRVEININQGKPMT 300
>gi|313676000|ref|YP_004053996.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
gi|312942698|gb|ADR21888.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
Length = 228
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 49/104 (47%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
D F + + + + ++ L E + + +EGH D GS ++++ L +R AV
Sbjct: 121 DINFKQSKAEILENSYGELDKLLNMMKEYPNMEIQLEGHTDFRGSASANMRLSEKRVNAV 180
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+Y ++ +S+ R+K ++G P E+A NRR +
Sbjct: 181 KSYLTSKNVSSDRIKTKAFGGTQPLSRESTEEAKLNNRRVEARI 224
>gi|157962391|ref|YP_001502425.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC
700345]
gi|157847391|gb|ABV87890.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345]
Length = 289
Score = 62.5 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 54 FDTSSYSIRPADIQVLSNLGSW--LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
+++ + ++ + + +++ LI+ + D G R+ + + +RA +V +
Sbjct: 184 YESGGTELTRYAKSQIARVQEYLAYDQNVDLVLIDAYTDSYGGRSINQKVSEQRADSVKD 243
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+FVA GI +R+ +G++ D ++NRR ++ +
Sbjct: 244 FFVASGIGQNRIHTMGHGEKRHVASNQTIDERSRNRRVVIRIS 286
>gi|239905381|ref|YP_002952120.1| chemotaxis protein MotB [Desulfovibrio magneticus RS-1]
gi|239795245|dbj|BAH74234.1| chemotaxis protein MotB [Desulfovibrio magneticus RS-1]
Length = 234
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 45/131 (34%), Gaps = 4/131 (3%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI 85
T + S+ V +SV F S I PA +++ + L + +
Sbjct: 88 TSDQNVKNNSGVSNDSSGVLMQVNNSVMFKPGSAEITPAAAKIMDGVAKILRDFKINLTV 147
Query: 86 EGHADELG---SRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDED 141
GHAD+ S L RA A Y + +R++ P V +
Sbjct: 148 RGHADDDEGSGPYPSKWELSAARAAAAVRYLSEKAGIPSTRLRAVGLADSQPLVPPTSAE 207
Query: 142 AYAKNRRAIVF 152
++NRR F
Sbjct: 208 NKSRNRRIEFF 218
>gi|220935619|ref|YP_002514518.1| sodium-type flagellar protein MotY, putative [Thioalkalivibrio sp.
HL-EbGR7]
gi|219996929|gb|ACL73531.1| sodium-type flagellar protein MotY, putative [Thioalkalivibrio sp.
HL-EbGR7]
Length = 280
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
V FDT+ + + L + + + ++ GHAD G + L RRA AV
Sbjct: 175 RVHFDTNLSRLDARAHETLREVLTAWRAQRHMRVIVAGHADVRGGDTINDPLSRRRAEAV 234
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ GI +R+++ S+G P G E A+A NRRA V+L
Sbjct: 235 RTFLDVYGIPRNRIELRSFGATWPLDPGEGEAAWALNRRATVWL 278
>gi|89076780|ref|ZP_01163047.1| hypothetical outer membrane protein OmpA [Photobacterium sp. SKA34]
gi|89047578|gb|EAR53193.1| hypothetical outer membrane protein OmpA [Photobacterium sp. SKA34]
Length = 139
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 39/125 (31%), Gaps = 5/125 (4%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIE 86
+ + V + E + ++ SV S + D L + +
Sbjct: 1 VDTAPPVQAATVTVEPSTVTIAYSV----DSKHLTEEDKHRLQPMIQRLTRYPSATAEVT 56
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
G+ GS ++ L +RA V A+++ G+ A+N
Sbjct: 57 GYTSNTGSEAYNLKLSEKRAKNVAELLSQYVADANQITSKGIGEANSIATNDTAKGRAEN 116
Query: 147 RRAIV 151
RR +
Sbjct: 117 RRVEI 121
>gi|298208372|ref|YP_003716551.1| putative outer membrane protein [Croceibacter atlanticus HTCC2559]
gi|83848293|gb|EAP86163.1| putative outer membrane protein [Croceibacter atlanticus HTCC2559]
Length = 332
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 39/85 (45%)
Query: 69 LSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L + + I GH D +G ++ +G +RA V Y ++ GI A++M +S
Sbjct: 247 LELKSYLQKHPNKRVSIVGHTDFVGEEEDNLWIGEQRAKLVMKYLISIGIDANKMTASSK 306
Query: 129 GKEMPSVYGHDEDAYAKNRRAIVFL 153
G+ P + AKNRR + +
Sbjct: 307 GESDPKFPNTTDANRAKNRRIEIKV 331
>gi|116619652|ref|YP_821808.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116222814|gb|ABJ81523.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076]
Length = 263
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 55/138 (39%), Gaps = 5/138 (3%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE- 77
+ ++ P + +S FFD IR L+ + L+
Sbjct: 122 ATVNVSAPPPPPPPAPPTAQATINDRIASDVQDAFFDYDKTDIRSDARDALTRNATALKA 181
Query: 78 ----KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
+IEGH DE GS ++ LG RRA + + V GI A R+K SYGKE P
Sbjct: 182 ILNDFPGAAIVIEGHCDERGSAEYNLGLGDRRASSAKEFLVGLGIPADRLKTISYGKERP 241
Query: 134 SVYGHDEDAYAKNRRAIV 151
+E + KNRR
Sbjct: 242 QCTEQNETCWQKNRRVHF 259
>gi|323435973|ref|ZP_01049351.2| OmpA family protein [Dokdonia donghaensis MED134]
gi|321496288|gb|EAQ39323.2| OmpA family protein [Dokdonia donghaensis MED134]
Length = 547
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 44/107 (41%), Gaps = 3/107 (2%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
D++ FD S I+ L+ + + + I H D GS + + L +RRA +
Sbjct: 437 DNILFDLDSAKIKEISTITLNTVVATLKANPELKIAINAHTDAQGSASYNKRLSMRRAAS 496
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGH--DEDAYAKNRRAIVFL 153
Y +++GIS R+ +G+E + NRR +
Sbjct: 497 AMEYLLSKGISKDRLSSQGFGEEQLLINCTSCTPQENELNRRIEFVV 543
>gi|320156521|ref|YP_004188900.1| outer membrane protein-like peptidoglycan-associated (lipo)protein
[Vibrio vulnificus MO6-24/O]
gi|319931833|gb|ADV86697.1| outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Vibrio vulnificus MO6-24/O]
Length = 208
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 60/139 (43%), Gaps = 1/139 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
D S+ + + + S + V F S I P + + + +L+ +
Sbjct: 54 DLCPDTPSTAEIDNDGCGTYVKTSQQMQIRVLFANDSDKINPVFRKQIKEMSEFLKLYPS 113
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++G+A G+ ++ L RRA V + GI+ SR+++ +G + G DE
Sbjct: 114 TSIELQGYASRTGNAEHNLDLSKRRANNVREMLIGYGIAQSRVRIVGFGDSALASEGTDE 173
Query: 141 DAYAKNRRAIVFLKGCRAN 159
++A NRR + + G + +
Sbjct: 174 VSHALNRRVVASVVGYKGD 192
>gi|269962097|ref|ZP_06176451.1| sodium-type flagellar protein MotY [Vibrio harveyi 1DA3]
gi|269833181|gb|EEZ87286.1| sodium-type flagellar protein MotY [Vibrio harveyi 1DA3]
Length = 293
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Query: 59 YSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
+ A + LS + ++ + L+ + D +++S +L RRA ++ YF +
Sbjct: 192 DQLTKASKKRLSQIADYVRHNQDIDLVLVATYTDSTDGKSASQSLSERRAESLRTYFESL 251
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G+S R++V YGK P KNRR ++ L
Sbjct: 252 GLSGDRIQVQGYGKRRPIADNGSPIGKDKNRRVVISL 288
>gi|261496238|ref|ZP_05992643.1| heat-modifiable outer membrane protein [Mannheimia haemolytica
serotype A2 str. OVINE]
gi|261308069|gb|EEY09367.1| heat-modifiable outer membrane protein [Mannheimia haemolytica
serotype A2 str. OVINE]
Length = 372
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 53/143 (37%), Gaps = 12/143 (8%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK---HDCDFLIE 86
E+ + + V FD S++PA L + + + +
Sbjct: 229 GQGAAPVEAPEVVTKNFAFSSDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVN 288
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV--YGHDEDAY- 143
G+ D +G S++ L RRA V NY V++G + + + YG+ P
Sbjct: 289 GYTDRIGKEASNLKLSQRRAETVANYIVSKGTNPANVTAVGYGEANPVTGHTCDAVKGRK 348
Query: 144 ------AKNRRAIVFLKGCRANT 160
A +RR + ++G + T
Sbjct: 349 ALIACLAPDRRVEIQVQGSKEVT 371
>gi|86137994|ref|ZP_01056570.1| OmpA family protein [Roseobacter sp. MED193]
gi|85825586|gb|EAQ45785.1| OmpA family protein [Roseobacter sp. MED193]
Length = 213
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 66/167 (39%), Gaps = 17/167 (10%)
Query: 4 STIFIILSAITMMSIS-------------GIDNLDTKISSPDTVLNESSLQEQFSSSVGD 50
++ I+ ++ + S G + L +F+ V
Sbjct: 7 KSVAILGLVLSATACSHNQAGEPLDSSLMGAATANNAAVMRGEGEYAIQLAARFAEEVPT 66
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAV 109
++ F + + VL +W+++ F + GH D +G + + LGLRRA +
Sbjct: 67 TINFAFNDARLDGEARAVLDRQAAWIKQFPEVRFRVYGHTDAVGGNSYNKQLGLRRARSA 126
Query: 110 FNYFVARGISASRMKV-TSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
N+ V+RGI R++ S G+ P + + + NRR + + G
Sbjct: 127 VNHLVSRGIDRRRLEAMVSKGESQPLILTQEPERR--NRRTVTEVSG 171
>gi|58580251|ref|YP_199267.1| hypothetical protein XOO0628 [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84622235|ref|YP_449607.1| hypothetical protein XOO_0578 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188574968|ref|YP_001911897.1| hypothetical protein PXO_04090 [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|58424845|gb|AAW73882.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84366175|dbj|BAE67333.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188519420|gb|ACD57365.1| OmpA family protein [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 224
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 48/131 (36%), Gaps = 10/131 (7%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS----NLGSWLEKHDCDFLIE 86
+ + +V F +S ++P +VL L +L + ++
Sbjct: 70 AAPLAAGRVTLVDGRIGIRGNVLFAFNSDELQPEGREVLKSLAAPLAQYLRAREEILMVS 129
Query: 87 GHADELG------SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
G D+ + L +RA V +A G+ AS + ++G + P DE
Sbjct: 130 GFTDDRPVLGGNRRYADNWELSAQRALTVTRALIAEGVPASSVFAAAFGSQQPVDSNADE 189
Query: 141 DAYAKNRRAIV 151
AKNRR +
Sbjct: 190 ARRAKNRRVEI 200
>gi|163745388|ref|ZP_02152748.1| OmpA family domain protein [Oceanibulbus indolifex HEL-45]
gi|161382206|gb|EDQ06615.1| OmpA family domain protein [Oceanibulbus indolifex HEL-45]
Length = 317
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 48/135 (35%), Gaps = 2/135 (1%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
++ + ++ + V + + F+T + ++ L L L+
Sbjct: 179 TPEATAEVPLATATGDLAATLKAEGHVVLNRLEFETGTSALGAGPFATLERLAELLKADP 238
Query: 81 -CDFLIEGHADELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGH 138
+ GH D +GS ++ L +RA AV + + R++ G P
Sbjct: 239 GLRVALVGHTDAVGSLEANTVLSRKRAEAVRERLVQSYDVDPDRLEARGAGYLAPRGSNL 298
Query: 139 DEDAYAKNRRAIVFL 153
E +NRR V +
Sbjct: 299 TEAGREENRRVEVVV 313
>gi|49182352|gb|AAT57678.1| OmpA [Pasteurella multocida]
Length = 348
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 50/121 (41%), Gaps = 10/121 (8%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRR 105
++ V F ++PA VL + + + + G+ D LGS ++ L RR
Sbjct: 228 TLNTDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSASVAVAGYTDRLGSDAYNLKLSQRR 287
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLKGC 156
A V NY VA+G++ + + T G+ P A +RR + +KG
Sbjct: 288 ADTVANYLVAKGVAQNAISATGRGEANPVTGNKCDSVKGRKALIACLADDRRVEIAVKGN 347
Query: 157 R 157
+
Sbjct: 348 K 348
>gi|45758065|gb|AAO85791.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
Length = 367
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 53/143 (37%), Gaps = 12/143 (8%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK---HDCDFLIE 86
E+ + + V FD S++PA L + + + +
Sbjct: 224 GQGAAPVEAPEVVTKNFAFSSDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVN 283
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV--YGHDEDAY- 143
G+ D +G S++ L RRA V NY V++G + + + YG+ P
Sbjct: 284 GYTDRIGKEASNLKLSQRRAETVANYIVSKGTNPANVTAVGYGEANPVTGHTCDAVKGRK 343
Query: 144 ------AKNRRAIVFLKGCRANT 160
A +RR + ++G + T
Sbjct: 344 ALIACLAPDRRVEIQVQGSKEVT 366
>gi|148259193|ref|YP_001233320.1| OmpA/MotB domain-containing protein [Acidiphilium cryptum JF-5]
gi|326402346|ref|YP_004282427.1| putative outer membrane protein [Acidiphilium multivorum AIU301]
gi|146400874|gb|ABQ29401.1| OmpA/MotB domain protein [Acidiphilium cryptum JF-5]
gi|325049207|dbj|BAJ79545.1| putative outer membrane protein [Acidiphilium multivorum AIU301]
Length = 364
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVF 110
VFF+ ++ P Q++S + + G+ D G+ ++ L LRRA+ V
Sbjct: 261 VFFNWDKANLTPRAQQIVSEAAKASQTTKVTRLNVNGYTDTSGAPAYNMKLSLRRAHNVA 320
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
VA G+S + + + YG+ V +NRR + L
Sbjct: 321 AQLVADGVSKNDIVIKGYGETHLLVPTGPNVREPQNRRVEIIL 363
>gi|94309657|ref|YP_582867.1| OmpA/MotB [Cupriavidus metallidurans CH34]
gi|93353509|gb|ABF07598.1| outer membrane protein or related peptidoglycan-associated
(lipo)protein [Cupriavidus metallidurans CH34]
Length = 217
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/157 (23%), Positives = 56/157 (35%), Gaps = 11/157 (7%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS 70
A G +P V E+ + FD ++P L
Sbjct: 61 PATANAQCDGALAPAAAAPAPTPVAPPVVSSEK--VTFAADTLFDFDKAVLKPEGKAKLD 118
Query: 71 NLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
+L S L+ + +I GH D GS + L +RRA +V Y V++G+ A+R+ G
Sbjct: 119 DLVSKLQGITLEVIIAVGHTDSFGSDKYNDRLSIRRAESVKAYLVSKGVEANRVYTEGKG 178
Query: 130 KEMPSVY------GHDE--DAYAKNRRAIVFLKGCRA 158
K V NRR V + G R+
Sbjct: 179 KRQLKVDPKSCKGNRTAQIACQQPNRRVEVEVVGTRS 215
>gi|331006081|ref|ZP_08329417.1| OmpA/MotB domain containing protein [gamma proteobacterium
IMCC1989]
gi|330420118|gb|EGG94448.1| OmpA/MotB domain containing protein [gamma proteobacterium
IMCC1989]
Length = 262
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 44/111 (39%), Gaps = 2/111 (1%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNSSIALGL 103
S + + + ++ + + L+ + ++++ I+GH D +G R ++
Sbjct: 99 SQIEKKSLYYNDAEELKSSARRYLNQVADYVKEDPAVKTVYIDGHTDSVGVRADNLEKSK 158
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
R V +Y V +G+S + +G+ A NRR + L
Sbjct: 159 ERTALVVDYLVEKGVSPDMIVARWHGERYQVATNQTAKGRATNRRVTLRLS 209
>gi|254473145|ref|ZP_05086543.1| OmpA/MotB [Pseudovibrio sp. JE062]
gi|211957866|gb|EEA93068.1| OmpA/MotB [Pseudovibrio sp. JE062]
Length = 344
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 45/119 (37%), Gaps = 13/119 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLG--------SWLEKHDCDFLIEGHADELG-----S 94
V F + + P L L ++ + ++GH D
Sbjct: 223 FQSEVLFSSGDEEVNPQGRNQLDILASAILELEGQIPDEINWVLRVDGHTDARPLSGTGR 282
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA +V Y +++G+ R+ +G+ P G ++AYAKNRR + L
Sbjct: 283 LRDNWELSAARAISVVKYLISKGVEPDRLVAAGFGEFQPLEEGTTDEAYAKNRRIELKL 341
>gi|282891235|ref|ZP_06299738.1| hypothetical protein pah_c048o071 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498928|gb|EFB41244.1| hypothetical protein pah_c048o071 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 238
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 2/134 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV-LSNLGSW-LEKH 79
D + P + + +SV F +S I+ + + L + ++ +
Sbjct: 102 SPGDPGSAIPGIDAFYDPATYPELAGIFESVRFPYNSNLIKGEENLLALRKVANYLKKHD 161
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
IEGH DE G+ ++ALG RR+ AV + G++ + SYGKE P H+
Sbjct: 162 RVYVFIEGHCDERGAEAYNLALGSRRSNAVREILIKEGVNPENLFTISYGKERPLFLDHN 221
Query: 140 EDAYAKNRRAIVFL 153
E+++ +NRRA +
Sbjct: 222 EESWGQNRRAEFKI 235
>gi|163745845|ref|ZP_02153204.1| OmpA family protein [Oceanibulbus indolifex HEL-45]
gi|161380590|gb|EDQ05000.1| OmpA family protein [Oceanibulbus indolifex HEL-45]
Length = 231
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/183 (22%), Positives = 68/183 (37%), Gaps = 30/183 (16%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSP--------------------------DTV 34
M I +I + ++ + + +
Sbjct: 7 MTRRHITLIAGTAALAGLTACAPSNDPVYTQFYREAGSVVDTGQFGNATLHNRQVMTGEE 66
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELG 93
L +F++ VG +V F +S + VL W+ + F + GH D +G
Sbjct: 67 RVTFDLANRFANEVGSTVTFAFNSAQLDATAQAVLRQQAGWIRQFPEIRFRVYGHTDLVG 126
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVT-SYGKEMPSVYGHDEDAYAKNRRAIVF 152
S+ + ALG+RRA AV Y GIS SR++ SYG+ P + + NRR +
Sbjct: 127 SQAYNRALGMRRAQAVVGYLSTLGISPSRLEAVVSYGETQPLIVTQGRERR--NRRTVTE 184
Query: 153 LKG 155
+ G
Sbjct: 185 VSG 187
>gi|325577896|ref|ZP_08148129.1| outer membrane protein P5 [Haemophilus parainfluenzae ATCC 33392]
gi|325160326|gb|EGC72453.1| outer membrane protein P5 [Haemophilus parainfluenzae ATCC 33392]
Length = 366
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 52/138 (37%), Gaps = 10/138 (7%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGH 88
+ + ++ V F +++P L + + + ++ + + G+
Sbjct: 229 GQGAAPVVAPEVVSKTFNLSSDVTFAFGKANLKPQAKATLDGIYGEIAQINNANVAVAGY 288
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY--- 143
D +G ++ L RRA +V NY VA+G+ A + +GK P
Sbjct: 289 TDRIGKDAPNLKLSQRRADSVANYLVAKGVPAQNISAVGHGKANPVTGSTCDAVKGRKAL 348
Query: 144 ----AKNRRAIVFLKGCR 157
A +RR + + G +
Sbjct: 349 IACLAPDRRVEIAVNGTK 366
>gi|304312214|ref|YP_003811812.1| hypothetical protein HDN1F_25860 [gamma proteobacterium HdN1]
gi|301797947|emb|CBL46169.1| Hypothetical protein HDN1F_25860 [gamma proteobacterium HdN1]
Length = 222
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/161 (21%), Positives = 64/161 (39%), Gaps = 12/161 (7%)
Query: 6 IFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQE------QFSSSVGDSVFFDTSSY 59
+ +++ A + +++ E L E + ++ F T++
Sbjct: 61 MALVVLAFGSAHACADQQVAVRVALALKAPIERGLVEVEAVGRYIVIRIPEATCFPTNAA 120
Query: 60 SIRPADIQVLSNLGSWLEK-HDCDFLIEGHADELGS----RNSSIALGLRRAYAV-FNYF 113
++RP + VL + S L+ + + GH+D++ +S+ RA AV
Sbjct: 121 TLRPQCLPVLVTIRSALQGLEKARYTVAGHSDDVPINTARYSSNWEFAAARAGAVLVELL 180
Query: 114 VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
A G SA + SYG P V D A+NRR V ++
Sbjct: 181 KATGFSADHFTLASYGPTRPLVANTSADNRARNRRVEVVVE 221
>gi|288959500|ref|YP_003449841.1| ompA/MotB domain protein [Azospirillum sp. B510]
gi|288911808|dbj|BAI73297.1| ompA/MotB domain protein [Azospirillum sp. B510]
Length = 416
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/126 (15%), Positives = 37/126 (29%), Gaps = 3/126 (2%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
V + + + F T +++ ++ +G L L+ H D
Sbjct: 288 TGAVEVLAGEDGALVIRIPAAAMFATGGDAVKARHRAIVERVGQTLAAEPGGVLVVAHTD 347
Query: 91 ELGSRNSSIALGLRRAYA---VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+ + G A + R I +R+ +G + P NR
Sbjct: 348 DQSPTTGRLPTGQALTDARAEAVRRLLERSIPPARLSAEGHGDQEPVALNDTPAGRDANR 407
Query: 148 RAIVFL 153
R + L
Sbjct: 408 RIDIRL 413
>gi|225849650|ref|YP_002729884.1| OmpA family protein [Persephonella marina EX-H1]
gi|225646341|gb|ACO04527.1| OmpA family protein [Persephonella marina EX-H1]
Length = 235
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 49/120 (40%), Gaps = 3/120 (2%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE---KHDCDFLIEGHADELGS 94
+++ + + V F S + + L + + L+ K + LI GHA +
Sbjct: 96 EAIENYIVVRLFNDVIFKPDSAELTEKSKKALRGVANALKALDKAYSEVLINGHAYVVTK 155
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L ++RA V Y + G++ ++ VT YG P + +N R +F+K
Sbjct: 156 GIDPWKLSIKRAVVVAQYLIEHGVNPEKIAVTGYGNTKPVYTWNHPLLKRRNDRVEIFIK 215
>gi|45758063|gb|AAO85790.1| heat-modifiable outer membrane protein [Mannheimia haemolytica]
Length = 367
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 53/143 (37%), Gaps = 12/143 (8%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK---HDCDFLIE 86
E+ + + V FD S++PA L + + + +
Sbjct: 224 GQGAAPVEAPEVVTKNFAFSSDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVN 283
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV--YGHDEDAY- 143
G+ D +G S++ L RRA V NY V++G + + + YG+ P
Sbjct: 284 GYTDRIGKEASNLKLSQRRAETVANYIVSKGTNPANVTAVGYGEANPVTGHTCDAVKGRK 343
Query: 144 ------AKNRRAIVFLKGCRANT 160
A +RR + ++G + T
Sbjct: 344 ALIACLAPDRRVEIQVQGSKEVT 366
>gi|227823348|ref|YP_002827320.1| hypothetical protein NGR_c28210 [Sinorhizobium fredii NGR234]
gi|227342349|gb|ACP26567.1| flagellar motor protein [Sinorhizobium fredii NGR234]
Length = 343
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 46/119 (38%), Gaps = 13/119 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLG--------SWLEKHDCDFLIEGHADELG-----S 94
V F + S + P ++ L + + ++GH D +
Sbjct: 222 FQSEVLFSSGSNDLNPEGQGEMAKLATALLDLAKEIPAEINWVLRVDGHTDNVPLSGTGR 281
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA +V + ++RG+ A R+ +G+ P G +A A+NRR + L
Sbjct: 282 FADNWELSSARATSVVKFLISRGVPADRLVAAGFGEYQPIAVGESLEARAQNRRIELKL 340
>gi|239820234|ref|YP_002947419.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
gi|239805087|gb|ACS22153.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
Length = 276
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/149 (22%), Positives = 59/149 (39%), Gaps = 12/149 (8%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSS---YSIRPADIQVLSNLGSW 75
+G ++ + P ++ +++G F + P + L L
Sbjct: 130 AGCADVLAVRALPAAERPAAASPAPRRTTLGADGLFRFDGRSLADLLPEGRRKLDALAGD 189
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
++ D + G+ D LGS+ + AL L RA V +Y V G+ A +++V G+ P V
Sbjct: 190 IKAADA-IKVTGYTDRLGSQAYNSALSLARANTVRDYLVQAGVPAQKIQVQGKGESEPKV 248
Query: 136 YGHDEDAYAK-------NRRAIVFLKGCR 157
+ A A NRR + + R
Sbjct: 249 QC-TQTARAALIDCLAPNRRVEIEVFAER 276
>gi|114571128|ref|YP_757808.1| OmpA/MotB domain-containing protein [Maricaulis maris MCS10]
gi|114341590|gb|ABI66870.1| OmpA/MotB domain protein [Maricaulis maris MCS10]
Length = 329
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 46/114 (40%), Gaps = 11/114 (9%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGS--------WLEKHDCDFLIEGHADE---LGSRNSSI 99
V F + S ++ + L + + I+GH D + S+
Sbjct: 213 DVLFPSGSAALSNEGRESLRPIADAIIQLTDEIPSDLEWVIRIDGHTDPVPIRTTYPSNW 272
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V N+ G+ ++R+ +G+ P V G +A A+NRR + L
Sbjct: 273 HLSAARAISVVNWMEDLGVPSNRLVAAGFGEHYPMVEGRSAEANARNRRIELKL 326
>gi|260900780|ref|ZP_05909175.1| outer membrane protein [Vibrio parahaemolyticus AQ4037]
gi|308108014|gb|EFO45554.1| outer membrane protein [Vibrio parahaemolyticus AQ4037]
Length = 205
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 54/138 (39%), Gaps = 1/138 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
D + + S + V F S I P + + L +L+++
Sbjct: 53 DLCPGTPLGAEIDNDGCGSYANSSQQMQIRVLFANDSDEINPVFAKQIRELSDFLKEYPS 112
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++G+A G ++ L RRA V + GI+ R+ + YG + + G DE
Sbjct: 113 TSIELQGYASRTGGSEHNLDLSKRRAENVRKALLQNGIAPDRVTIVGYGDTVLATTGTDE 172
Query: 141 DAYAKNRRAIVFLKGCRA 158
++A NRR + G +
Sbjct: 173 VSHALNRRVTATVVGHKG 190
>gi|254373800|ref|ZP_04989283.1| hypothetical protein FTDG_01584 [Francisella novicida GA99-3548]
gi|151571521|gb|EDN37175.1| hypothetical protein FTDG_01584 [Francisella novicida GA99-3548]
Length = 417
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 65/179 (36%), Gaps = 26/179 (14%)
Query: 2 QYSTIFIILSAITMMSISGI-DNLDTKISSPDTVLNESSLQEQFSSS------------- 47
+ + ++ S +T +S D+ D E E S+
Sbjct: 3 KLLKLCLMASLLTTLSACQTLDDKDKDSGPLTFPTLEPCTAELLQSNQSFICVKEQTGPD 62
Query: 48 -VGDSVFFDTSSYSIRPADIQVLSNLGSW----------LEKHDCDFLIEGHADELGSRN 96
+ ++ FD SY++ +VL L ++ ++ + + D+ +
Sbjct: 63 LIETNIKFDADSYTLNTQAKEVLDKLFAYLKLTDTTNFTIKGYAGKVESKILTDQKILTD 122
Query: 97 SSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+I L RA +V Y V +G S+ + + + G + P + A N+R + LK
Sbjct: 123 YNIRLSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDSTSSRAINQRVEITLK 181
>gi|319778099|ref|YP_004134529.1| type IV / vi secretion system protein, dotu family [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|317171818|gb|ADV15355.1| type IV / VI secretion system protein, DotU family [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 440
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 20/141 (14%), Positives = 42/141 (29%), Gaps = 8/141 (5%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEK 78
ES + + + F +S + ++ +L ++
Sbjct: 297 QAGAPADLRSALSGTESVSLAKLTIQASNPELFQSSRPQLTEGFEPLIGSLAKVILANQE 356
Query: 79 HDCDFLIEGHADE-----LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
+ + GH D +++ L RA + + V G+ R+ P
Sbjct: 357 LIGNITVVGHTDSVPLQKTNPLSTNQRLSEARAQTIADMLVQNGVPRDRVHSEGRAATDP 416
Query: 134 SVYGHDEDAYAKNRRAIVFLK 154
+ A NRR V ++
Sbjct: 417 VATDSTREGRALNRRVEVLVE 437
>gi|294670740|ref|ZP_06735604.1| hypothetical protein NEIELOOT_02451 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307548|gb|EFE48791.1| hypothetical protein NEIELOOT_02451 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 278
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 50/140 (35%), Gaps = 12/140 (8%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSS---YSIRPADIQVLSNLGSWLEKHDC--D 82
+ + + + F + L ++ + L + +
Sbjct: 132 PAQEQPAPAMMAQPQMQRIVLSADALFAFDKGDLAHMNAQGKAELDDVAAKLGRLERLDQ 191
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
I GH D LGS + ++ L +RA V NY ++RG+ A+ + G+ P +
Sbjct: 192 VRIIGHTDYLGSDSYNMRLSQQRAETVRNYLISRGVPANVLYAYGAGETQPVKQCDNRGN 251
Query: 143 YAK-------NRRAIVFLKG 155
A+ NRR + + G
Sbjct: 252 RAELIACLQPNRRVELEVNG 271
>gi|260432166|ref|ZP_05786137.1| OmpA domain protein [Silicibacter lacuscaerulensis ITI-1157]
gi|260415994|gb|EEX09253.1| OmpA domain protein [Silicibacter lacuscaerulensis ITI-1157]
Length = 299
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 53/144 (36%), Gaps = 5/144 (3%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSS---VGDSVFFDTSSYSIRPADIQVLSN 71
M+ ++ D + +TV L + + D + F++ + ++ L+
Sbjct: 153 MIRVTPQDAKPPPLVVEETVQGAGGLLSDLARDGHVILDDLSFESGAVALGEGPFASLAL 212
Query: 72 LGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYG 129
L +L + + GH D+ G ++I + RRA AV + + R++ G
Sbjct: 213 LAGYLSDNPGVRLALVGHTDDTGDLQANINVSTRRAQAVRARLIEAHGVDPERVEAQGVG 272
Query: 130 KEMPSVYGHDEDAYAKNRRAIVFL 153
P + NRR L
Sbjct: 273 YLSPLTSNATPEGRELNRRVEAVL 296
>gi|71907729|ref|YP_285316.1| hypothetical protein Daro_2103 [Dechloromonas aromatica RCB]
gi|71847350|gb|AAZ46846.1| OmpA/MotB [Dechloromonas aromatica RCB]
Length = 214
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 48/130 (36%), Gaps = 10/130 (7%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVL----SNLGSWLEKHDCDFLIE 86
+ + + +V F +S ++P Q+L + ++L + ++
Sbjct: 69 AGPLASGRVTLTNGKIGISGNVLFALNSDQLQPEGKQLLKSLSQPIAAYLGASEQMLMVS 128
Query: 87 GHADELG------SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
G D++ + L +RA V + G+ AS + ++G + P
Sbjct: 129 GFTDDMPVRGSNRQFADNWELSAQRALTVTRTLIDDGVPASSIFAAAFGAQQPVADNAAA 188
Query: 141 DAYAKNRRAI 150
+ A+NRR
Sbjct: 189 EGRARNRRVE 198
>gi|239995972|ref|ZP_04716496.1| peptidoglycan-associated lipoprotein [Alteromonas macleodii ATCC
27126]
Length = 188
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 50/186 (26%), Positives = 80/186 (43%), Gaps = 32/186 (17%)
Query: 1 MQY--STIFIILSAITMMSISG-----------------------------IDNLDTKIS 29
M + I L +TMM+ S + + +
Sbjct: 3 MNKVMKSFIIALPVVTMMACSSGPSEEELAAERNRLAQEQAAAEAEAREAEAQRVKAEAA 62
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGH 88
E QE + +V+FD SI+P ++L ++ ++ IEGH
Sbjct: 63 QRMKRQEEMVQQEMEALKNEQTVYFDFDRSSIKPEFQRILDKHAAFLVKNPSTKVTIEGH 122
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D G+ +IALG RRA +V Y + G+S+S++ V SYG+E P+V G E A+A+NRR
Sbjct: 123 TDSRGTPEYNIALGERRAQSVETYLLNAGVSSSQVTVVSYGEEKPAVMGSTEYAFAQNRR 182
Query: 149 AIVFLK 154
+V +
Sbjct: 183 GVVVYR 188
>gi|238763376|ref|ZP_04624340.1| Outer membrane protein A [Yersinia kristensenii ATCC 33638]
gi|238698475|gb|EEP91228.1| Outer membrane protein A [Yersinia kristensenii ATCC 33638]
Length = 358
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F + +++ Q L L S ++ D ++ G AD +G ++AL
Sbjct: 228 TLKSDVLFAFNKSTLKAEGQQALDQLYSQLSSIDPKDGSVVVLGFADRIGQPAPNLALSQ 287
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE---------DAYAKNRRAIVFLK 154
RRA +V +Y V++GI A ++ G+ P + + A +RR + +K
Sbjct: 288 RRADSVRDYLVSKGIPADKITARGEGQANPVTGNTCDNVKPRAALIECLAPDRRVEIEVK 347
Query: 155 GCR 157
G +
Sbjct: 348 GYK 350
>gi|225011410|ref|ZP_03701848.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A]
gi|225003913|gb|EEG41885.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A]
Length = 370
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 46/109 (42%), Gaps = 7/109 (6%)
Query: 52 VFFDTSSYSIRPADIQVL--SNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
+ + S ++ +++ L + I H D G+ + +++L RRA +V
Sbjct: 261 IHYALGSAALTSKSTKIIDEYILARMKADKNILVEIGSHTDSRGTDSLNMSLSERRAKSV 320
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHD-----EDAYAKNRRAIVFL 153
Y +++GI+ R+ YG++ + E +A NRR +
Sbjct: 321 VEYLISKGINKQRLIAEGYGEDKLLNDCENGVDCSESLHANNRRTEFKV 369
>gi|254509401|ref|ZP_05121484.1| sodium-type flagellar protein MotY (Polar flagellum motorprotein)
[Vibrio parahaemolyticus 16]
gi|219547675|gb|EED24717.1| sodium-type flagellar protein MotY (Polar flagellum motorprotein)
[Vibrio parahaemolyticus 16]
Length = 168
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYA 108
+ +D +S + + L+ + ++ + L+ + D S+++S L RRA
Sbjct: 59 ILHYDRTSVELNKQSQKRLAQIAEYIRHNQDIDLVLVSTYTDAEDSKSASQNLSERRAEV 118
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +YF + G+ R++V YGK P +NRR ++ L
Sbjct: 119 LQDYFKSLGLPEDRIRVQGYGKRRPVDDNASPIGKDRNRRVVISL 163
>gi|198284396|ref|YP_002220717.1| OmpA/MotB domain-containing protein [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|198248917|gb|ACH84510.1| OmpA/MotB domain protein [Acidithiobacillus ferrooxidans ATCC
53993]
Length = 184
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/172 (20%), Positives = 63/172 (36%), Gaps = 21/172 (12%)
Query: 1 MQYSTIFIILSAITMMSISGID----------------NLDTKISSPDTVLNESSLQEQF 44
M+ S ++L A ++ + K +P + E F
Sbjct: 2 MKKSAYQLLLLAGASFGLAACAPVHYHYCDLNCWHKPKPVPVKPVAPPPPAKIIAPVEHF 61
Query: 45 SSSVG----DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADELGSRNSSI 99
V F T+S + ADI VL + + KH L ++G+ + GS ++
Sbjct: 62 VLQSKPVTIRGVNFTTNSSKLMTADIAVLDSAARFALKHPTAILLVKGYCSKTGSYKYNL 121
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
L RA +V +Y + RG+ R+ Y E P + N+R ++
Sbjct: 122 GLSQERAASVAHYLMGRGVPNYRIITRGYSWEDPVASNATREGRFLNQRVVI 173
>gi|532658|gb|AAA99311.1| antigen [Treponema pallidum]
Length = 416
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 47/123 (38%), Gaps = 3/123 (2%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADE 91
+E + S+ ++V FD S S+ P++ + L + L L+ GHA+
Sbjct: 292 PDAKVRETEEGVTISI-ENVQFDADSASLAPSEYEKLRKIAELLRAFPDRELLVSGHAER 350
Query: 92 LGSRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + RA V Y + A+ + G + ED KNRR
Sbjct: 351 RGSVQDQQRISEERADVVARYLQELGVVDAAHVYTRGCGAQQSIAPNDSEDGRRKNRRVE 410
Query: 151 VFL 153
+ +
Sbjct: 411 ITI 413
>gi|28898406|ref|NP_798011.1| putative outer membrane protein [Vibrio parahaemolyticus RIMD
2210633]
gi|28806623|dbj|BAC59895.1| putative outer membrane protein [Vibrio parahaemolyticus RIMD
2210633]
Length = 214
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 54/138 (39%), Gaps = 1/138 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
D + + S + V F S I P + + L +L+++
Sbjct: 62 DLCPGTPLGAEIDNDGCGSYANSSQQMQIRVLFANDSDEINPVFAKQIRELSDFLKEYPS 121
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++G+A G ++ L RRA V + GI+ R+ + YG + + G DE
Sbjct: 122 TSIELQGYASRTGGSEHNLDLSKRRAENVRKALLQNGITPDRVTIVGYGDTVLATTGTDE 181
Query: 141 DAYAKNRRAIVFLKGCRA 158
++A NRR + G +
Sbjct: 182 VSHALNRRVTATVVGHKG 199
>gi|296156377|ref|ZP_06839215.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
gi|295892976|gb|EFG72756.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
Length = 215
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 47/116 (40%), Gaps = 10/116 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLG----SWLEKHDCDFLIEGHADELG------SR 95
+ +V F +S ++P +L +L ++L +D ++ G D+
Sbjct: 85 IGISGNVLFALNSDQLQPQGRDLLKSLAGPLSAYLRANDEILMVSGFTDDQRLREGNRRF 144
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ L +RA V + G+ AS + ++G P DE AKNRR +
Sbjct: 145 ADNWELSAQRALTVTRALIDDGVPASSLFAAAFGSGQPVSSNADEQGRAKNRRVEI 200
>gi|163788219|ref|ZP_02182665.1| putative flagellar motor protein MotB [Flavobacteriales bacterium
ALC-1]
gi|159876539|gb|EDP70597.1| putative flagellar motor protein MotB [Flavobacteriales bacterium
ALC-1]
Length = 285
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 55/145 (37%), Gaps = 7/145 (4%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
++I + I+ D +N S+ D + F + SY++ ++L +
Sbjct: 121 VTLAIVTSLKKEVGINDSDIEINVEKGV--VFISIADKLLFKSGSYNVTDRANEILGKVA 178
Query: 74 SWLE-KHDCDFLIEGHADELGSRNSS----IALGLRRAYAVFNYFVARGISASRMKVTSY 128
+ K D + ++E H D L ++RA A+ + ++ ++
Sbjct: 179 KVINSKPDFEAMVESHTDNKSYSKPPLLDNWDLSVKRATAIVRVLESLNVNPQQLIAAGR 238
Query: 129 GKEMPSVYGHDEDAYAKNRRAIVFL 153
+P V + AKNRR + +
Sbjct: 239 SSYVPLVENDTAENRAKNRRTRIVV 263
>gi|160939630|ref|ZP_02086978.1| hypothetical protein CLOBOL_04522 [Clostridium bolteae ATCC
BAA-613]
gi|158437421|gb|EDP15185.1| hypothetical protein CLOBOL_04522 [Clostridium bolteae ATCC
BAA-613]
Length = 281
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 44/133 (33%), Gaps = 5/133 (3%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGH 88
S + ++ + + + F + ++ A +L +G L++ + L
Sbjct: 113 DSENLDAVVTNSENAVYIRFKNDLLFAPDNANLTDASKSMLDAVGIMLKEKQDNILAIYI 172
Query: 89 ADEL----GSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAY 143
S + L RA V Y + I ++ YGK P +
Sbjct: 173 NGHTAQAANSLINDRLLSSERADNVAIYLEEQVGIPPKKLICRGYGKYYPIADNTTREGR 232
Query: 144 AKNRRAIVFLKGC 156
+NRR + + G
Sbjct: 233 EQNRRVDMIILGT 245
>gi|288958638|ref|YP_003448979.1| ompA-family protein [Azospirillum sp. B510]
gi|288910946|dbj|BAI72435.1| ompA-family protein [Azospirillum sp. B510]
Length = 502
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 35/110 (31%), Gaps = 10/110 (9%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSIALGLRRAYAV 109
F + S I P +++ ++ L + G+ D + S+ L RA+ V
Sbjct: 391 FASGSDRIEPRYVELFRHVAEALRPEQGRISVIGNTDSVAIRSTRYRSNQELSEARAFRV 450
Query: 110 FNYF------VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
A SR+ G P + NRR + L
Sbjct: 451 QRLMTDILGKDAGRDGGSRLSAEGRGDGDPIAPNTTAEGRQANRRVDIVL 500
>gi|295700038|ref|YP_003607931.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
gi|295439251|gb|ADG18420.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
Length = 217
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 10/116 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLG----SWLEKHDCDFLIEGHADELG------SR 95
+ +V F +S ++P +L +L ++L D ++ G D+
Sbjct: 85 IGISGNVLFALNSAQLQPEGRALLKSLAGPLSAYLRASDQILMVSGFTDDQRLREGNRRF 144
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ L +RA V + G+ AS + ++G E P DE AKNRR +
Sbjct: 145 ADNWELSAQRALTVTRALIDEGLPASSVFAAAFGSEQPVSSNADESGRAKNRRVEI 200
>gi|58038715|ref|YP_190679.1| hypothetical protein GOX0240 [Gluconobacter oxydans 621H]
gi|58001129|gb|AAW60023.1| Flagellar motor protein [Gluconobacter oxydans 621H]
Length = 333
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 39/117 (33%), Gaps = 11/117 (9%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIEGHADELGSR---N 96
+ F S + P + ++ L ++ ++GHAD
Sbjct: 214 FQSEILFPQGSADLTPEGRKEITTLAHTFKQVASTIPTDLPWILRVDGHADRQPIHSAFP 273
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA V +A G+ + T + P AYA+NRR L
Sbjct: 274 SNWELSSERAITVVKLLIAEGVDPHHLAATGFADYQPLDAASTPAAYARNRRIEFRL 330
>gi|163751264|ref|ZP_02158492.1| sodium-type flagellar protein MotY [Shewanella benthica KT99]
gi|161328978|gb|EDQ00052.1| sodium-type flagellar protein MotY [Shewanella benthica KT99]
Length = 277
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
Query: 54 FDTSSYSIRPADIQVLSNLGSW--LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
+++ + ++ + + + LI+ + D G R+ + + +RA +V N
Sbjct: 172 YESGGSELTRFSKSQIAKVQEYLAYDSEIELVLIDAYTDSYGGRSINQRVSEQRADSVKN 231
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+F++ GI+ R+ +G+ D +NRR ++ +
Sbjct: 232 FFLSAGINQDRIHTVGHGERRHVASNASIDERGRNRRVVIRIS 274
>gi|116694470|ref|YP_728681.1| hypothetical protein H16_B0519 [Ralstonia eutropha H16]
gi|113528969|emb|CAJ95316.1| conserved hypothetical protein [Ralstonia eutropha H16]
Length = 215
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 44/116 (37%), Gaps = 10/116 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD----FLIEGHADELG------SR 95
+ +V F +S ++P +L +L L + ++ G D+
Sbjct: 85 IGISGNVLFALNSDQLQPEGRDLLKSLAQPLSAYLRSRDEILMVSGFTDDQQVREGNRRF 144
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ L +RA V + GI + + ++G + P D + AKNRR +
Sbjct: 145 ADNWELSAQRALTVTRTLIDAGIPPTSVFSAAFGSQQPVTPNADAEGRAKNRRVEI 200
>gi|289625126|ref|ZP_06458080.1| OmpA family protein [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289648705|ref|ZP_06480048.1| OmpA family protein [Pseudomonas syringae pv. aesculi str. 2250]
gi|330867997|gb|EGH02706.1| OmpA family protein [Pseudomonas syringae pv. aesculi str. 0893_23]
Length = 447
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 51/149 (34%), Gaps = 7/149 (4%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
+ A + + L + ++ + + + + + F S + Q
Sbjct: 303 AIVAQSGFVAQTVQALKVQPTAQMPA--DYQALARKAERLSVNFRFAQGSAKLDNKAQQD 360
Query: 69 LSNLGSWLEKHDC---DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
L + +L+ + + G D + L RA AV + G++ +
Sbjct: 361 LKRVAEYLKTSNQLNQHVTLVGFGDAKSDPARAALLSRLRAMAVRRELLKSGVTFRDI-- 418
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G EMP +D KNRR V+++
Sbjct: 419 VGLGDEMPVATNDIDDGRIKNRRVEVWVQ 447
>gi|220935429|ref|YP_002514328.1| OmpA/MotB domain-containing protein [Thioalkalivibrio sp. HL-EbGR7]
gi|219996739|gb|ACL73341.1| OmpA/MotB domain-containing protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 427
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 12/119 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIEGHADELGS----R 95
+FF+T+S I P + L + + + D ++EGH D
Sbjct: 305 FQSELFFETASADIGPEGRERLDRVARTIREIDARIPGDIGWVLMVEGHTDRRPIRTEQF 364
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
S+ L RA ++ NY ++RG++ R+ +G+ P G E A+++NRR + L
Sbjct: 365 PSNWELSSARAQSIVNYLISRGVAPRRLAAAGFGEYHPLDAGSTEAAFSRNRRIEMRLS 423
>gi|254372326|ref|ZP_04987817.1| OmpA family protein [Francisella tularensis subsp. novicida
GA99-3549]
gi|151570055|gb|EDN35709.1| OmpA family protein [Francisella novicida GA99-3549]
Length = 417
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 65/179 (36%), Gaps = 26/179 (14%)
Query: 2 QYSTIFIILSAITMMSISGI-DNLDTKISSPDTVLNESSLQEQFSSS------------- 47
+ + ++ S +T +S D+ D E E S+
Sbjct: 3 KLLKLCLMASLLTTLSACQTLDDKDKDSGPLTFPTLEPCTAELLQSNQSFICVKEQTGPD 62
Query: 48 -VGDSVFFDTSSYSIRPADIQVLSNLGSW----------LEKHDCDFLIEGHADELGSRN 96
+ ++ FD SY++ +VL L ++ ++ + + D+ +
Sbjct: 63 LIETNIKFDADSYTLNTQAKEVLDKLFAYLKLTDTTNFTIKGYAGKVESKILTDQKILTD 122
Query: 97 SSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+I L RA +V Y V +G S+ + + + G + P + A N+R + LK
Sbjct: 123 YNIRLSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDSTSSRAINQRVEITLK 181
>gi|291562029|emb|CBL40845.1| Flagellar motor protein [butyrate-producing bacterium SS3/4]
Length = 313
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 36/125 (28%), Gaps = 12/125 (9%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH---DCDFLIEGHA-------- 89
+ S ++VFF +S + VL + I H
Sbjct: 115 DDYTYVSFANNVFFGANSSVLTREGQAVLYTFAKAIAPAAGGIEQVNIMSHTAKVTDNSQ 174
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
L R+ V Y + I ++ SYG+ P E+ KNRR
Sbjct: 175 INPQIIRKDRILSAMRSAEVCIYLQQQNVIKPEKLVDISYGEYRPIADNSTEEGRIKNRR 234
Query: 149 AIVFL 153
L
Sbjct: 235 IEFLL 239
>gi|260778540|ref|ZP_05887432.1| outer membrane protein [Vibrio coralliilyticus ATCC BAA-450]
gi|260604704|gb|EEX30999.1| outer membrane protein [Vibrio coralliilyticus ATCC BAA-450]
Length = 203
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/190 (16%), Positives = 71/190 (37%), Gaps = 31/190 (16%)
Query: 1 MQYSTIFIILSAITMMSIS------------------------------GIDNLDTKISS 30
M+ + + A + S + D
Sbjct: 1 MKKAFFTLTAVACLLSSATHAEDVYDYRQTPVPNQIADLLDDDKDGVINARDLCPDTPLG 60
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHA 89
D + + + + F+ S I+P + + + +L+ + ++G+A
Sbjct: 61 ADIDNDGCGTYVKSEEEMDLHILFENDSSDIQPVFLTQIREMADFLKIYPSTSIELQGYA 120
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
++G+ ++AL RRA V + + G+S +R+++ +G + G DE +AKNR+
Sbjct: 121 SKVGNHGHNMALSQRRAEEVESALINNGVSHTRIRIVGFGDTNLADTGDDEITHAKNRKV 180
Query: 150 IVFLKGCRAN 159
+ + G + +
Sbjct: 181 VATVVGHKGS 190
>gi|219872299|ref|YP_002476674.1| outer membrane protein P5 , heat-modifiable outer membrane protein
[Haemophilus parasuis SH0165]
gi|219692503|gb|ACL33726.1| outer membrane protein P5 precursor, heat-modifiable outer membrane
protein [Haemophilus parasuis SH0165]
gi|253807583|gb|ACT36164.1| outer membrane protein P5 [Haemophilus parasuis]
gi|312270777|gb|ADQ55789.1| OmpA [Haemophilus parasuis]
gi|312270779|gb|ADQ55790.1| OmpA [Haemophilus parasuis]
Length = 371
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 55/140 (39%), Gaps = 12/140 (8%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIE 86
+ + + + V FD +++PA Q L + + + +
Sbjct: 228 QGAAPVVAAPEVVTKNFAFSSDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVN 287
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED----- 141
G+ D +G +++ L +RA V NY V++G++ + + YG+ P +
Sbjct: 288 GYTDRIGKDAANLTLSQKRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRK 347
Query: 142 ----AYAKNRRAIVFLKGCR 157
A +RR + ++G +
Sbjct: 348 ALITCLAPDRRVEIQVQGSK 367
>gi|108763487|ref|YP_633317.1| OmpA family protein [Myxococcus xanthus DK 1622]
gi|108467367|gb|ABF92552.1| OmpA family protein [Myxococcus xanthus DK 1622]
Length = 171
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 56/170 (32%), Gaps = 16/170 (9%)
Query: 1 MQYSTIFIILSAITMMSISGIDN-----LDTKISSPDTVLNESSLQEQFSSSVGDSVFFD 55
M+ + I +S +T+ ++ + + + + + + F
Sbjct: 1 MKLKALCITVSLLTLPGVAFAQGGFGALTKAAGDAGKSAVEKRVNTKLMDEGRQNQCSFK 60
Query: 56 TSSYSIRPADIQVLSNLGSWLEK----------HDCDFLIEGHADELGSRNSSIALGLRR 105
T + + L L + L F + GH D G + L +R
Sbjct: 61 TGTAQLDAGCEAKLKKLTNALVDAKKQLVAAGVKSYKFEVSGHTDSTGDAAKNKKLSEQR 120
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSV-YGHDEDAYAKNRRAIVFLK 154
A + +ARGI + YG E P V AKNRR + ++
Sbjct: 121 AETIVKELIARGIPRGEIIAVGYGSEKPLVKPDDTAAKKAKNRRYELQVR 170
>gi|85375193|ref|YP_459255.1| hypothetical protein ELI_11830 [Erythrobacter litoralis HTCC2594]
gi|84788276|gb|ABC64458.1| hypothetical protein ELI_11830 [Erythrobacter litoralis HTCC2594]
Length = 293
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 54/150 (36%), Gaps = 4/150 (2%)
Query: 13 ITMMSISGIDNL-DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
M +G + ++ + + + + +V+FD+ + + + L
Sbjct: 140 TATMIRTGTAQGFAEQTAATEALRGRVGDIDNYLIKDTTNVYFDSGKWRLDGEAQRDLCQ 199
Query: 72 LGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRM-KVTSY 128
+ E + L+ G+ D GS + L RRA V NY RM T
Sbjct: 200 AAAQAEATDNALLLVVGYTDADGSEELNQELSERRAARVTNYLQQECGWKPWRMLTPTGM 259
Query: 129 GKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
+ P+ + A+NRR V + +A
Sbjct: 260 AEADPAADNYTPQGKAQNRRVAVNILVSKA 289
>gi|332669204|ref|YP_004452212.1| OmpA/MotB domain-containing protein [Cellulomonas fimi ATCC 484]
gi|332338242|gb|AEE44825.1| OmpA/MotB domain protein [Cellulomonas fimi ATCC 484]
Length = 301
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 42/110 (38%), Gaps = 4/110 (3%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG---SRNSSIALGLR 104
V D VFF + + +VL + + +EGHA+ + ++ L
Sbjct: 174 VADDVFFAPARAELTDTARRVLDVASPLIVGIGENVSVEGHANVIPVSGRYPTNWELSAD 233
Query: 105 RAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA V + V R+ +G P V G +A A NRR + +
Sbjct: 234 RATQVLRHLVEVDGMPGPRIMAVGFGDTRPLVAGDSPEALAANRRVDLVI 283
>gi|293603403|ref|ZP_06685830.1| peptidoglycan-associated lipoprotein [Achromobacter piechaudii ATCC
43553]
gi|292818176|gb|EFF77230.1| peptidoglycan-associated lipoprotein [Achromobacter piechaudii ATCC
43553]
Length = 166
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
SV+FD SY++ ++ + IEG+ DE G ++ALG RRA
Sbjct: 59 QRSVYFDFDSYTVSDQYRGLVETHARYLASHQQQKVKIEGNTDERGGAEYNLALGQRRAD 118
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
AV G+S ++++ S+GKE P G E +A+NRRA +
Sbjct: 119 AVRRMMTLLGVSDNQIETISFGKEKPKSTGTSEADFAENRRADI 162
>gi|148826224|ref|YP_001290977.1| outer membrane protein P5 [Haemophilus influenzae PittEE]
gi|148716384|gb|ABQ98594.1| Outer membrane protein P5 [Haemophilus influenzae PittEE]
Length = 238
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 53/138 (38%), Gaps = 10/138 (7%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG-SWLEKHDCDFLIEGH 88
+ + + S+ V F +++P L ++ + + G+
Sbjct: 101 QGAAPVVAAPEVVSKTFSLNSDVTFAFGKANLKPQAQATLDSIYGEMSQVKSAKVAVAGY 160
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY--- 143
D +GS ++ L RA +V NYFVA+G++A + T YGK P
Sbjct: 161 TDRIGSDAFNVKLSQERADSVANYFVAKGVAADAISATGYGKANPVTGATCDQVKGRKAL 220
Query: 144 ----AKNRRAIVFLKGCR 157
A +RR + + G +
Sbjct: 221 IACLAPDRRVEIAVNGTK 238
>gi|86130800|ref|ZP_01049399.1| OmpA family protein [Dokdonia donghaensis MED134]
gi|85818211|gb|EAQ39371.1| OmpA family protein [Dokdonia donghaensis MED134]
Length = 632
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 69/151 (45%), Gaps = 12/151 (7%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG--------DSVFFDTSSYSIRPADI 66
S G + I+ + ++++ E V + ++FD +IRP+
Sbjct: 479 TASADGYKEANQNITVGKSGMSQTITLEPIIDQVVVTETEVVLNPIYFDFDKSNIRPSAA 538
Query: 67 QVLSNLGSWLEKHDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
L L + ++++ + E H D GS + + L RRA ++ +Y V++GI+ASR+
Sbjct: 539 AELDRLVNVMKQYPTMVISAESHTDIRGSESYNKNLSQRRADSMRDYVVSKGINASRISS 598
Query: 126 TSYGKEMPSV---YGHDEDAYAKNRRAIVFL 153
G+ P++ ED + NRR++ +
Sbjct: 599 IGKGESEPAIACGTNCTEDEHQLNRRSVFKI 629
>gi|92114381|ref|YP_574309.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043]
gi|91797471|gb|ABE59610.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043]
Length = 830
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 9/107 (8%)
Query: 57 SSYSIRPADIQVLSNLGSW--LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
++ A Q L L + LI GHAD +G+ ++ L L+RA V Y +
Sbjct: 721 DYAGLQQAGQQELDKLAERLLNTQDLGQILITGHADPIGNEAANQQLSLQRAMTVRQYLI 780
Query: 115 ARGISASRMKVTSYGKEMPSVYGHDEDAYAK-------NRRAIVFLK 154
+G+ A ++ G E P V D+ A+ NRR + ++
Sbjct: 781 GKGVPAGLIEAKGAGSERPLVTCDDDQPRAQLIECLAPNRRVEIEVR 827
>gi|330860773|emb|CBX71062.1| outer membrane protein A [Yersinia enterocolitica W22703]
Length = 363
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F + +++P Q L L + ++ D ++ G AD +G ++AL
Sbjct: 233 TLKSDVLFAFNKSTLKPEGQQALDQLYAQLSSIDPKDGSVVVLGFADRIGQPAPNLALSQ 292
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE---------DAYAKNRRAIVFLK 154
RRA +V +Y V++GI A ++ G+ P + + A +RR + +K
Sbjct: 293 RRADSVRDYLVSKGIPADKITARGEGQANPVTGNTCDNVKPRAALIECLAPDRRVEIEVK 352
Query: 155 GCR 157
G +
Sbjct: 353 GYK 355
>gi|294624615|ref|ZP_06703288.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|294665275|ref|ZP_06730569.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292601088|gb|EFF45152.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292604952|gb|EFF48309.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 223
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 49/131 (37%), Gaps = 10/131 (7%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG----SWLEKHDCDFLIE 86
+ + +V F +S ++P +VL +L +L D ++
Sbjct: 70 AAPLAAGRVTLVDGRIGIRGNVLFAFNSDELQPEGREVLKSLATPLTQYLRARDEILMVS 129
Query: 87 GHADELG------SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
G D+ + L +RA V +A G+ AS + ++G + P DE
Sbjct: 130 GFTDDRPVLGGNRRYADNWELSAQRALTVTRALIAEGVPASSVFAAAFGSQQPVDSNADE 189
Query: 141 DAYAKNRRAIV 151
AKNRR +
Sbjct: 190 ARRAKNRRVEI 200
>gi|225012825|ref|ZP_03703259.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A]
gi|225003099|gb|EEG41075.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A]
Length = 283
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 59/148 (39%), Gaps = 8/148 (5%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
++T+ ++ + + +S D +N S+ D + F + SY++ +VL
Sbjct: 119 SVTLALVTSLKGVLGNMSDDDIEINVEKGVVY--VSISDKLLFRSGSYTVTSRAKEVLGK 176
Query: 72 LGSW-LEKHDCDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGIS-ASRMKV 125
+ + K + +F++EGH D + + L ++RA AV +RM
Sbjct: 177 VATVVNNKPELEFMVEGHTDNVPIKSDGIVDNWDLSVKRATAVVRILEKDFGVAPARMTA 236
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+P AKNRR + +
Sbjct: 237 AGRSFYIPVADNDTAANRAKNRRTRIVV 264
>gi|163800953|ref|ZP_02194853.1| hypothetical protein 1103602000593_AND4_01783 [Vibrio sp. AND4]
gi|159175302|gb|EDP60099.1| hypothetical protein AND4_01783 [Vibrio sp. AND4]
Length = 252
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 51/141 (36%), Gaps = 1/141 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH- 79
+ N+ S+ + F S I P + L+ L H
Sbjct: 102 SQTTCKPPQDIEAFRNDLSIVANIYDLLNVDNQFAIDSAEINPKYMGHLAEAAYILRDHP 161
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
++ GHAD G+ + L RA V Y GI++ R++ S G+ +P G
Sbjct: 162 YLSLVVTGHADATGTPEYNSQLAQNRAEQVKRYLTVFGITSDRVQTKSVGESLPLYEGQT 221
Query: 140 EDAYAKNRRAIVFLKGCRANT 160
NRR + + +++T
Sbjct: 222 PGVRLTNRRVSIEVLSGQSDT 242
>gi|90577378|ref|ZP_01233189.1| putative sodium-type flagellar protein MotY precursor [Vibrio
angustum S14]
gi|90440464|gb|EAS65644.1| putative sodium-type flagellar protein MotY precursor [Vibrio
angustum S14]
Length = 298
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNSSIALGLRRAYAVFN 111
F + + Q+L++L S+L+ LI+GH D +GS +++ + RA V +
Sbjct: 185 FQLGQRVVSSSQKQILADLASYLKHDKNVKRVLIDGHTDNVGSNVANLQISKIRADDVAS 244
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
G+ +S ++V S+G P + + AKNRR +
Sbjct: 245 ILRENGVRSSLIEVRSHGSRYPVANNNTQHGKAKNRRVTI 284
>gi|91781366|ref|YP_556573.1| putative flagellar motor protein (MotB) [Burkholderia xenovorans
LB400]
gi|91694026|gb|ABE37223.1| putative flagellar motor protein (MotB) [Burkholderia xenovorans
LB400]
Length = 230
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 50/122 (40%), Gaps = 5/122 (4%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGS-- 94
S + ++ + F++ + P VL + + L + L+EGH D L
Sbjct: 108 SQTPQAVEIAINARILFNSGDARLLPESFAVLQQIAAVLRDRAKNNILVEGHTDSLPIST 167
Query: 95 --RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
S+ L RA AV +F RGI RM P + G+D A A NRR +
Sbjct: 168 AKYESNWELSSARAGAVVRFFADRGIEGHRMAAIGRADNFPLIIGNDAVANAANRRVTIL 227
Query: 153 LK 154
++
Sbjct: 228 VE 229
>gi|329755842|gb|AEC04318.1| outer membrane protein A [Pasteurella multocida]
gi|329755852|gb|AEC04323.1| outer membrane protein A [Pasteurella multocida]
Length = 358
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 50/121 (41%), Gaps = 10/121 (8%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLG-SWLEKHDCDFLIEGHADELGSRNSSIALGLRR 105
++ V F ++PA VL + + + G+ D LGS ++ L RR
Sbjct: 238 TLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSASVAVAGYTDRLGSDAYNLKLSQRR 297
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLKGC 156
A V NY VA+G++ + + T +G+ P A +RR + +KG
Sbjct: 298 ADTVANYLVAKGVAQNAISATGHGEANPVTGNKCDSVKGRKALIACLADDRRVEIPVKGN 357
Query: 157 R 157
+
Sbjct: 358 K 358
>gi|327188824|gb|EGE56018.1| putative outer membrane protein (OmpA protein) [Rhizobium etli
CNPAF512]
Length = 343
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 38/102 (37%), Gaps = 5/102 (4%)
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG-----SRNSSIALGLRRAYAVFN 111
+ +L + + ++GH D + + L RA +V
Sbjct: 239 GQTEMAKLATALLDLAKEIPPEINWVLRVDGHTDNVPLAGTGRYRDNWELSSARATSVVK 298
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ + +G+ A R+ +G+ P G DA A NRR + L
Sbjct: 299 FLIGQGVPADRLVAAGFGEFQPIAPGDAPDARATNRRIELKL 340
>gi|227498859|ref|ZP_03928999.1| predicted protein [Acidaminococcus sp. D21]
gi|226904311|gb|EEH90229.1| predicted protein [Acidaminococcus sp. D21]
Length = 354
Score = 62.1 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 52/134 (38%), Gaps = 3/134 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQEQ--FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ P V+ E + ++ DS+ F + P++ + +L + H
Sbjct: 218 AEAAPVVEEPAPVVEEPVQEPAHVYNDYYLDSIHFASDDDQPLPSERDKMDHLVQVAKDH 277
Query: 80 D-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
F + G+ D S + L RR V Y G+S+ R+K+ G++ P
Sbjct: 278 PDSTFKLVGNTDSDASDAYNEDLSKRRVDHVAQYVSNNGVSSDRLKLNYKGEKDPVASNA 337
Query: 139 DEDAYAKNRRAIVF 152
E A NRR V+
Sbjct: 338 TEQGKADNRRVDVW 351
>gi|322435990|ref|YP_004218202.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
gi|321163717|gb|ADW69422.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
Length = 260
Score = 62.1 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/145 (19%), Positives = 49/145 (33%), Gaps = 9/145 (6%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGD-------SVFFDTSSYSIRPADIQVLSN 71
+ + D + N +++ + SV F + +D + L
Sbjct: 98 AAGQSADQANQAAQGASNRVDSLNGVIANLDNYKQLSDVSVTFGFDKTVLTKSDKEQLDG 157
Query: 72 LGSWLEK-HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYG 129
L + L+ + G D +G + L RRA AV +Y A+ + + G
Sbjct: 158 LAASLQSARGYLLEVTGGTDSVGDAQYNYKLSQRRADAVVDYLSAKYNVPPHKFYLVGIG 217
Query: 130 KEMPSVYGHDEDAYAKNRRAIVFLK 154
K+ A+NRR V L
Sbjct: 218 KDAQIASDKTASGRAQNRRVEVKLM 242
>gi|190893330|ref|YP_001979872.1| outer membrane protein (OmpA protein) [Rhizobium etli CIAT 652]
gi|190698609|gb|ACE92694.1| probable outer membrane protein (OmpA protein) [Rhizobium etli CIAT
652]
Length = 343
Score = 62.1 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 38/102 (37%), Gaps = 5/102 (4%)
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG-----SRNSSIALGLRRAYAVFN 111
+ +L + + ++GH D + + L RA +V
Sbjct: 239 GQTEMAKLATALLDLAKEIPPEINWVLRVDGHTDNVPLVGTGRYRDNWELSSARATSVVK 298
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ + +G+ A R+ +G+ P G DA A NRR + L
Sbjct: 299 FLIGQGVPADRLVAAGFGEFQPIAPGDAPDARATNRRIELKL 340
>gi|116051525|ref|YP_789639.1| OmpA family membrane protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|115586746|gb|ABJ12761.1| putative outer membrane protein precursor, OmpA family [Pseudomonas
aeruginosa UCBPP-PA14]
Length = 321
Score = 62.1 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 38/74 (51%)
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++GH+D G+R ++ L RRA AV Y + G+ S++ V YG+ P V +
Sbjct: 207 NRIELDGHSDNSGNRLTNRDLSRRRALAVQEYLKSNGVPESQINVRFYGERYPLVANNSA 266
Query: 141 DAYAKNRRAIVFLK 154
A+NRR V L
Sbjct: 267 ANRARNRRVTVHLS 280
>gi|15598722|ref|NP_252216.1| outer membrane protein precursor [Pseudomonas aeruginosa PAO1]
gi|218890247|ref|YP_002439111.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
LESB58]
gi|254242186|ref|ZP_04935508.1| hypothetical protein PA2G_02920 [Pseudomonas aeruginosa 2192]
gi|9949675|gb|AAG06914.1|AE004773_3 probable outer membrane protein precursor [Pseudomonas aeruginosa
PAO1]
gi|126195564|gb|EAZ59627.1| hypothetical protein PA2G_02920 [Pseudomonas aeruginosa 2192]
gi|218770470|emb|CAW26235.1| probable outer membrane protein precursor [Pseudomonas aeruginosa
LESB58]
Length = 321
Score = 62.1 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 38/74 (51%)
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++GH+D G+R ++ L RRA AV Y + G+ S++ V YG+ P V +
Sbjct: 207 NRIELDGHSDNSGNRLTNRDLSRRRALAVQEYLKSNGVPESQINVRFYGERYPLVANNSA 266
Query: 141 DAYAKNRRAIVFLK 154
A+NRR V L
Sbjct: 267 ANRARNRRVTVHLS 280
>gi|289668951|ref|ZP_06490026.1| OmpA family protein [Xanthomonas campestris pv. musacearum
NCPPB4381]
Length = 200
Score = 62.1 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 42/113 (37%), Gaps = 5/113 (4%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG----SRNSSIAL 101
+ + F + S + ++L + + LE+ ++ GH D+ + AL
Sbjct: 84 VRLASASMFPSGSAELDADQTRLLERVAAALEQVPGRVVVVGHTDDQPVRSLRFKDNFAL 143
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV-YGHDEDAYAKNRRAIVFL 153
RRA +V A R++ + G P A+NRR + L
Sbjct: 144 SARRAQSVGAVLAAGLRDPRRVQTSGAGDSQPIALPPQLPGNRARNRRVEILL 196
>gi|150026440|ref|YP_001297266.1| OmpA family outer membrane protein [Flavobacterium psychrophilum
JIP02/86]
gi|149772981|emb|CAL44465.1| Probable outer membrane protein, OmpA family [Flavobacterium
psychrophilum JIP02/86]
Length = 624
Score = 62.1 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 3/137 (2%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEK 78
++ + + LN + + + + FD + +I L + +
Sbjct: 485 EVEKSSGGEVAINADLNPKAPIITQTEVILSDINFDFNKSNITQEGAAELDKLVAVMTKY 544
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ + H D G ++ L RRA + Y +++GI+ +R+ +GK P V
Sbjct: 545 PEMVIFAKSHTDSRGDDKYNMLLSDRRAKSTVQYIISKGIAVNRITGEGFGKSEPKVQCD 604
Query: 139 --DEDAYAKNRRAIVFL 153
E + KNRR+ +
Sbjct: 605 KCTEAEHQKNRRSEFMI 621
>gi|89052772|ref|YP_508223.1| OmpA/MotB [Jannaschia sp. CCS1]
gi|88862321|gb|ABD53198.1| OmpA/MotB [Jannaschia sp. CCS1]
Length = 315
Score = 62.1 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 54/137 (39%), Gaps = 9/137 (6%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVG-------DSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+P+ +++S + D + F+T + + L+ L ++L +
Sbjct: 175 QSTRAPEPGVDDSPSPTDLIERLRTTGSAPLDDLQFETGASQLSGERYGSLTALAAFLAE 234
Query: 79 HDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFV-ARGISASRMKVTSYGKEMPSVY 136
++ GH D LGS + +IAL RA AV + G+ ++++ G P
Sbjct: 235 DPARSIVLVGHTDALGSLSGNIALSRSRALAVLQFLTGELGVDPAQVEFQGIGFLSPRAS 294
Query: 137 GHDEDAYAKNRRAIVFL 153
+ NRR V L
Sbjct: 295 NTTPEGREANRRVEVVL 311
>gi|296387971|ref|ZP_06877446.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
PAb1]
gi|313108871|ref|ZP_07794854.1| putative outer membrane protein precursor, OmpA family [Pseudomonas
aeruginosa 39016]
gi|310881356|gb|EFQ39950.1| putative outer membrane protein precursor, OmpA family [Pseudomonas
aeruginosa 39016]
Length = 321
Score = 62.1 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 38/74 (51%)
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++GH+D G+R ++ L RRA AV Y + G+ S++ V YG+ P V +
Sbjct: 207 NRIELDGHSDNSGNRLTNRDLSRRRALAVQEYLKSNGVPESQINVRFYGERYPLVANNSA 266
Query: 141 DAYAKNRRAIVFLK 154
A+NRR V L
Sbjct: 267 ANRARNRRVTVHLS 280
>gi|71909209|ref|YP_286796.1| OmpA/MotB [Dechloromonas aromatica RCB]
gi|71848830|gb|AAZ48326.1| OmpA/MotB [Dechloromonas aromatica RCB]
Length = 193
Score = 62.1 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 1/104 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVF 110
++F + + + L + ++K ++ GH D +GS+ S+ L RA A+
Sbjct: 90 LYFLEGTSELTADSKKELDGVFDEIKKRKVTDIVVIGHTDTVGSQESNDRLAEARAKAMQ 149
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G+ A +KV+ G+ P V DE A NRR + ++
Sbjct: 150 AELEHLGVDAGSIKVSGRGEREPLVKTADEVAEPLNRRVEIQVR 193
>gi|87311740|ref|ZP_01093855.1| probable outer membrane protein A (OmpA) [Blastopirellula marina
DSM 3645]
gi|87285524|gb|EAQ77443.1| probable outer membrane protein A (OmpA) [Blastopirellula marina
DSM 3645]
Length = 265
Score = 62.1 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 42/118 (35%), Gaps = 6/118 (5%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADEL---GSRN 96
+ + F T + ++ L + + + + +EGH D
Sbjct: 141 DLIRIEIPADQIFMTGTNTLHQNAYGTLDQVANAIRQQFPRNLIGVEGHTDNQAASPPFA 200
Query: 97 SSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S L A A F+ VAR + +R+ V +G P V A+NRR + +
Sbjct: 201 SQHQLSASMAQATFDQLVARGQVPPNRLFVVGHGGNHPVVSNATPAGQARNRRIDIVI 258
>gi|89053487|ref|YP_508938.1| OmpA/MotB [Jannaschia sp. CCS1]
gi|88863036|gb|ABD53913.1| OmpA/MotB [Jannaschia sp. CCS1]
Length = 217
Score = 62.1 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 4/125 (3%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSR 95
L E+F++SV ++ F +S + +L+ +++ F + GH D +GS
Sbjct: 62 AEILGERFANSVPTTINFAFNSAELDAEARNILAQQAAFIRNFPEVRFSVYGHTDAVGSN 121
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKV-TSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ LG RRA A N+ V++G+S R+ S G+ P V E+ NRR + +
Sbjct: 122 GYNQRLGRRRARAAVNFLVSQGVSRHRLAALVSLGETQPVVATDMEERR--NRRTVTEVS 179
Query: 155 GCRAN 159
G N
Sbjct: 180 GFMEN 184
>gi|148258147|ref|YP_001242732.1| hypothetical protein BBta_6939 [Bradyrhizobium sp. BTAi1]
gi|146410320|gb|ABQ38826.1| Putative flagellar motor protein MotB [Bradyrhizobium sp. BTAi1]
Length = 342
Score = 62.1 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 12/118 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLG--------SWLEKHDCDFLIEGHAD----ELGSR 95
VFFDT ++ P Q L+++ + ++GH D
Sbjct: 222 FQSEVFFDTGQATLLPEGQQELNSVATALVDLDKQIPAEISWVLRVDGHTDVRPINSPVF 281
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA +V Y ++ G+ A R+ + + P G+ EDA+ +NRR + L
Sbjct: 282 KSNWELSSARAISVVQYLISLGVPAQRLVAAGFAEFQPLDPGNTEDAFRRNRRIELKL 339
>gi|332292047|ref|YP_004430656.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332170133|gb|AEE19388.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 650
Score = 62.1 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADELGSRNSSIALGLRRAYA 108
+ ++FD ++IRP L + + + ++ L H D G + +++L +RA A
Sbjct: 537 NPIYFDFDRFNIRPDAALELEKVIAVMREYPNLVLDARSHTDSRGKDSYNLSLSDKRAKA 596
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHD-----EDAYAKNRRAIVFL 153
Y + +GIS+SR+ YG++ P + E+ + NRR+ +
Sbjct: 597 TVAYIINQGISSSRISGQGYGEKQPVNTCSNGVNCSEEEHQLNRRSEFIV 646
>gi|332519179|ref|ZP_08395646.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
gi|332045027|gb|EGI81220.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
Length = 284
Score = 62.1 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 51/135 (37%), Gaps = 6/135 (4%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDF 83
DT + D + S + S+ D + F+T SY + +L L + D
Sbjct: 135 DTSSLNEDEDITVSIDETVVMISISDKMLFNTGSYRVSNKANDILQKLADVINSEPSIDV 194
Query: 84 LIEGHADEL----GSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGH 138
++EGH D + + L + RA +V +S ++ + P
Sbjct: 195 MVEGHTDSRTISTPTLKDNWDLSVLRATSVVRKLQNEYSVSPEKLIASGRSSYQPLTAND 254
Query: 139 DEDAYAKNRRAIVFL 153
+D +KNRR + L
Sbjct: 255 TKDGRSKNRRTRIIL 269
>gi|330810626|ref|YP_004355088.1| hypothetical protein PSEBR_a3732 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327378734|gb|AEA70084.1| Conserved hypothetical protein; putative exported protein
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 449
Score = 62.1 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 53/146 (36%), Gaps = 8/146 (5%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD-SVFFDT--SSYSIRPADIQVLS 70
T+++ +G + + + S +V F S S+ Q L
Sbjct: 305 TIVAANGFIAQTVQAMAVTPNALMPEGYQALSRHAQRLTVNFRFEEGSASLDNKAHQDLG 364
Query: 71 NLGSWLEKH---DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
+ ++++H D + G D + L RA AV V G++ +V
Sbjct: 365 RVFDYIKQHGKTDRSVTLVGFGDAKDDPARADLLSKLRAMAVRRELVKYGVALR--EVRG 422
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFL 153
+G MP ++ +NRR V++
Sbjct: 423 FGALMPVAANSEDAGRVRNRRVEVWV 448
>gi|260063550|ref|YP_003196630.1| OmpA family protein [Robiginitalea biformata HTCC2501]
gi|88782994|gb|EAR14168.1| OmpA family protein [Robiginitalea biformata HTCC2501]
Length = 652
Score = 62.1 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 49/129 (37%), Gaps = 7/129 (5%)
Query: 32 DTVLNESSLQEQFSSSVG-DSVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHA 89
+ + + + + +++FD +IRP + + + + H
Sbjct: 522 EPETITAGYGDDLAKLLQLSTIYFDFDKANIRPDAEIEIQKVIAAMEKYPSLRIKANSHT 581
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD-----EDAYA 144
D G ++AL RRA + Y +++GI+ R++ +G+ D +
Sbjct: 582 DSRGPDAYNLALSQRRADSTVRYMISKGIAPERLEGEGFGESRLINRCDDGVPCSAQEHE 641
Query: 145 KNRRAIVFL 153
NRR+ +
Sbjct: 642 LNRRSEFII 650
>gi|330982164|gb|EGH80267.1| OmpA/MotB [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 447
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 51/149 (34%), Gaps = 7/149 (4%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
+ A + + L + ++ + + + + + F S + Q
Sbjct: 303 AIVAQSGFVAQTVQVLKVQPTAQMPA--DYQALARKAERLSVNFRFAQGSARLDNKAQQD 360
Query: 69 LSNLGSWLEKH---DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
L + +L+ D + G D + L RA AV + G++ +
Sbjct: 361 LKRVADYLKTSGKLDQHVTLVGFGDAKSDPERAALLSRLRAMAVRRELLKSGVTFRDI-- 418
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G EMP +D KNRR V+++
Sbjct: 419 VGLGDEMPVATNEIDDGRIKNRRVEVWVQ 447
>gi|148244623|ref|YP_001219317.1| peptidoglycan-associated lipoprotein [Candidatus Vesicomyosocius
okutanii HA]
gi|146326450|dbj|BAF61593.1| peptidoglycan-associated lipoprotein [Candidatus Vesicomyosocius
okutanii HA]
Length = 189
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 3/122 (2%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTS--SYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
+ ES + F + + + + + + + + Q++ + +EGH D
Sbjct: 67 PSITESFIVTSFRETDVNFILYFSDDGTEINKTSIKQIIKHANFMRNNPTLKLRLEGHTD 126
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
E G+R ++ALG RA V +SR++V S+G+E P HDEDA+ KNRR
Sbjct: 127 ERGTREYNLALGENRALNVKEILG-LYDLSSRIEVISFGEEKPMTQQHDEDAWQKNRRVE 185
Query: 151 VF 152
Sbjct: 186 FV 187
>gi|114776885|ref|ZP_01451928.1| flagellar motor protein [Mariprofundus ferrooxydans PV-1]
gi|114552971|gb|EAU55402.1| flagellar motor protein [Mariprofundus ferrooxydans PV-1]
Length = 200
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/162 (15%), Positives = 52/162 (32%), Gaps = 18/162 (11%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADI 66
L A + + ++ I+ S E+ ++ V +V F + +
Sbjct: 36 LGAEVAALRAELKQVNQDIADKKAQATASPKPERVATPVDRLWVTVSFRSGYMELTRESR 95
Query: 67 QVLSNLGSWL--EKHDCDFLIEGHADE-------------LGSRNSSIALGLRRAYAVFN 111
+ LS L + + + G+ D+ +++AL RA V
Sbjct: 96 KALSRLAKKFLSKPREQSIEVRGYTDDEPIGGYPGHRHKPHHPYKTNMALSHARATNVAQ 155
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ I ++ +G + +NRRA + L
Sbjct: 156 ALIDACIPNDSVRALGFGASNYVADNATAEGRQRNRRAEIHL 197
>gi|325475131|gb|EGC78317.1| OmpA family protein [Treponema denticola F0402]
Length = 391
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 34/75 (45%)
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
FLIEGH +L L ++RA + + RGI SR+ YG P +
Sbjct: 314 PYTKFLIEGHTADLNRPEDEKILSVQRAERIADEISKRGIDRSRIMTAGYGSTRPVAPSN 373
Query: 139 DEDAYAKNRRAIVFL 153
+E AKNRR + +
Sbjct: 374 NETNMAKNRRVEITV 388
>gi|91228645|ref|ZP_01262561.1| putative outer membrane protein [Vibrio alginolyticus 12G01]
gi|91187796|gb|EAS74112.1| putative outer membrane protein [Vibrio alginolyticus 12G01]
Length = 204
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 55/138 (39%), Gaps = 1/138 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
D + + S + V F S I P Q + L +L+++
Sbjct: 52 DLCPGTPLGAEIDNDGCGSYVDSSQEMQIRVLFANDSDVINPIFTQQILELSDFLKEYPN 111
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
I+G+A G+ ++ L RRA V + GIS R+ + YG + + G D+
Sbjct: 112 TSIEIQGYASRTGTAEHNLDLSKRRAENVRKELMKNGISGDRVTIVGYGDTVLATQGTDQ 171
Query: 141 DAYAKNRRAIVFLKGCRA 158
++A NRR + G +
Sbjct: 172 VSHALNRRVTATVIGHKG 189
>gi|110636551|ref|YP_676758.1| outer membrane peptidoglycan-associated lipoprotein [Cytophaga
hutchinsonii ATCC 33406]
gi|110279232|gb|ABG57418.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Cytophaga hutchinsonii ATCC 33406]
Length = 656
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 50/120 (41%), Gaps = 2/120 (1%)
Query: 36 NESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGS 94
E L ++ + ++ +D + IRP L + + + H DE GS
Sbjct: 523 AEVMLVKKERIVIVRNILYDYDKWDIRPDAAVELDTMVMLMNANPEIQIELGSHTDERGS 582
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH-DEDAYAKNRRAIVFL 153
+ L +RA A +Y +A GIS R+ YG++ P++ E + NRR +
Sbjct: 583 AEYNRVLAQKRAQAAVDYIIAHGISKDRIIAKGYGEDEPAIRNAKTEADHQTNRRTTFKV 642
>gi|294085848|ref|YP_003552608.1| flagellar motor protein [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292665423|gb|ADE40524.1| flagellar motor protein [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 389
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 48/118 (40%), Gaps = 12/118 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLG--------SWLEKHDCDFLIEGHADELGS----R 95
V F I + + ++ L + + ++GH D++
Sbjct: 265 FQSEVLFAPGQADIGDSGREQMTKLAVALAEIAREIPDDINWVLQVDGHTDDIPIRAGRY 324
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA +V + +++G+ +R+ T YG+ P + + EDA KNRR + +
Sbjct: 325 ADNWDLSTERALSVVRFLISQGLPPNRLAATGYGEHQPLINENSEDARQKNRRIELKI 382
>gi|269960160|ref|ZP_06174536.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269835131|gb|EEZ89214.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 345
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
F ++ + ++ L S++ + L++GH D +GS+ +++ + +RA V +
Sbjct: 212 FQFGQKTLSRSQQSTIAALYSYISVDDRVTKILVDGHTDNVGSQLANLTVSRQRAEQVAD 271
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V +G+ S ++V ++G P + + AKNRR + L
Sbjct: 272 ALVQQGVDRSLIEVRAHGSRYPIASNNTQAGQAKNRRVTLRL 313
>gi|254700373|ref|ZP_05162201.1| hypothetical protein Bsuib55_05884 [Brucella suis bv. 5 str. 513]
gi|261750869|ref|ZP_05994578.1| OmpA/MotB domain-containing protein [Brucella suis bv. 5 str. 513]
gi|261740622|gb|EEY28548.1| OmpA/MotB domain-containing protein [Brucella suis bv. 5 str. 513]
Length = 343
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 46/119 (38%), Gaps = 13/119 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIEGHADELG-----S 94
V F T S I P + L + + + + ++GH D +
Sbjct: 222 FQSEVLFPTGSAEINPKGQVEMKKLADAIIQLNREIPDDINWVLRVDGHTDNVPLAGTGR 281
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA AV + +A G+ A+R+ +G+ P + D A+NRR + L
Sbjct: 282 FRDNWELSSARATAVVKFLIANGVPANRLVAAGFGEYQPLDTANTADTRARNRRIELKL 340
>gi|149202387|ref|ZP_01879360.1| OmpA domain protein [Roseovarius sp. TM1035]
gi|149144485|gb|EDM32516.1| OmpA domain protein [Roseovarius sp. TM1035]
Length = 311
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 52/147 (35%), Gaps = 2/147 (1%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
+L T+ + + + ++ + +V + + F ++ +
Sbjct: 159 VLHVTTLAEGYTVQPIPAEEREALPRVDLVQALQTQGHAVLEGLDFGLGDNALGAGPYRS 218
Query: 69 LSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVT 126
L L + + + GH+D +G + AL RA AV N V + ++++
Sbjct: 219 LVTLAEFLTASPETRVALVGHSDSIGGLEQNSALSRARAEAVLNLLVEQHGVAPAQVEAH 278
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G P + +NRR V L
Sbjct: 279 GIGYLSPIASNTSPEGRERNRRVEVVL 305
>gi|83591777|ref|YP_425529.1| OmpA family protein [Rhodospirillum rubrum ATCC 11170]
gi|83574691|gb|ABC21242.1| OmpA family protein [Rhodospirillum rubrum ATCC 11170]
Length = 340
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/104 (33%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
VFFD S SI P +++ + + + GHAD G ++AL RRA AV
Sbjct: 237 VFFDFDSTSITPEAGGIINTAATNAKSTGSSTIEVTGHADRSGGDAYNLALSKRRAEAVV 296
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
GIS S++ V + G+ P V D +NRR +V LK
Sbjct: 297 GELERNGISRSQIAVYAKGEADPLVPTPDGVREPQNRRVVVVLK 340
>gi|33151319|ref|NP_872672.1| major outer membrane protein homolog, OmpA2 [Haemophilus ducreyi
35000HP]
gi|1872471|gb|AAB49274.1| OmpA2 [Haemophilus ducreyi]
gi|33147539|gb|AAP95061.1| major outer membrane protein-like protein, OmpA2 [Haemophilus
ducreyi 35000HP]
Length = 407
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 53/149 (35%), Gaps = 12/149 (8%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD- 82
++ + + + V FD + ++ QVL + +
Sbjct: 258 QGAQMMMDEPTPVAEPEVVSKNFAFSSDVLFDFAKADLKQEAAQVLDATNAEIVNLGLAT 317
Query: 83 --FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ G+ D +G +++ L RRA V NY VA+G + + YG+ P +
Sbjct: 318 PAIQVNGYTDRIGKEEANLKLSQRRAEMVANYLVAKGQNPVSINAVGYGEANPITGNTCD 377
Query: 141 ---------DAYAKNRRAIVFLKGCRANT 160
A +RR V ++G + T
Sbjct: 378 AVKGRKQLIACLAPDRRVEVQVQGTKQIT 406
>gi|296130809|ref|YP_003638059.1| OmpA/MotB domain protein [Cellulomonas flavigena DSM 20109]
gi|296022624|gb|ADG75860.1| OmpA/MotB domain protein [Cellulomonas flavigena DSM 20109]
Length = 198
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 48/129 (37%), Gaps = 7/129 (5%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ + E + + Q +++ + F S + P + L + L ++GH D
Sbjct: 72 EKSVRELAREAQGVTTLTSDLLFAFDSAELAPGAAGKIGELAAAL-PQGAAVAVDGHTDG 130
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG-----HDEDAYAKN 146
LG ++ L RA AV + A + VT +G P D A N
Sbjct: 131 LGGDAVNVPLSQARAQAVADALTAARPDLV-LTVTGHGSAQPVAEETTDGLDDPSGRALN 189
Query: 147 RRAIVFLKG 155
RR V + G
Sbjct: 190 RRVEVRVTG 198
>gi|85860625|ref|YP_462827.1| outer membrane protein [Syntrophus aciditrophicus SB]
gi|85723716|gb|ABC78659.1| outer membrane protein [Syntrophus aciditrophicus SB]
Length = 204
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/204 (16%), Positives = 77/204 (37%), Gaps = 50/204 (24%)
Query: 1 MQYSTIFIILSAITMMSISGIDNL------------------------------------ 24
M++S++ ++ SA ++S +
Sbjct: 1 MKFSSLILLASAFMLLSFAACAPAHRTRVILIPDPDGKVGEITVQNKGGAQIMTQAGQMA 60
Query: 25 -----DTKISSPDTVLNESSLQEQFSSSVGD--------SVFFDTSSYSIRPADIQVLSN 71
T SP +V+++ + F + ++F T+S+ + ++VL++
Sbjct: 61 EVHDEATAPVSPASVMDDKEIHRIFGDVLAALPEKPLTFILYFKTNSFELNIPSLKVLNS 120
Query: 72 LGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
+ + + GH D +G+ + L +RA +V Y V +G+ +++ +G+
Sbjct: 121 AHEAISSRQSEDISVIGHTDRVGTDEKNYILSRKRALSVKKYLVVKGVHPDAIELDYHGE 180
Query: 131 EMPSVYGHDEDAYAKNRRAIVFLK 154
P V + A +NRR V ++
Sbjct: 181 ANPLVKTAEGVAEPRNRRVEVIVR 204
>gi|299138485|ref|ZP_07031664.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX8]
gi|298599731|gb|EFI55890.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX8]
Length = 256
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 64/128 (50%), Gaps = 2/128 (1%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLI 85
+ + + + + F +V D +F+D S+ +RP + + S+L H LI
Sbjct: 128 SMGADNNTDGDMGSEAAFHQNVQD-LFYDYDSFDLRPDAQSSVMHAASYLNAHPAIKVLI 186
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
G+ D+ GS +I LG RA A V+ G+SA+R++V SYGKE +E + +
Sbjct: 187 GGYCDDRGSAEYNITLGENRANAAKTALVSAGVSANRLRVVSYGKEKQFCTEENESCWQQ 246
Query: 146 NRRAIVFL 153
NRRA L
Sbjct: 247 NRRAQFTL 254
>gi|86148066|ref|ZP_01066367.1| putative outer membrane protein [Vibrio sp. MED222]
gi|85834126|gb|EAQ52283.1| putative outer membrane protein [Vibrio sp. MED222]
Length = 203
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/185 (18%), Positives = 77/185 (41%), Gaps = 30/185 (16%)
Query: 1 MQYSTIFIILSAITMMSISGI-------------------DNLDTKISSPDTVLNESSLQ 41
M+ + + + + +T+ + S D+ D +++ DT +
Sbjct: 2 MKITYLLLPVLTMTLFACSNQQREAYIETPEAEQIADLQDDDKDGVVNARDTCPSTPETS 61
Query: 42 EQFSSSVGDSV----------FFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHAD 90
+ + G+++ F S+ + P +S + +LE + I+G+A
Sbjct: 62 QVDNDGCGETIRAEEVRQLKILFAHDSFEVNPIFSSQISTMAEFLENYKSASIEIQGYAS 121
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
++GS ++ L +RA V + ++ GI R+++ YG+E G D ++A NR+
Sbjct: 122 KVGSNEYNLDLSKKRANNVQDELLSNGIEPERVRIVGYGEERLENDGDDPTSHALNRKVT 181
Query: 151 VFLKG 155
+ G
Sbjct: 182 ATVVG 186
>gi|46579053|ref|YP_009861.1| chemotaxis protein PomB [Desulfovibrio vulgaris str. Hildenborough]
gi|120603363|ref|YP_967763.1| OmpA/MotB domain-containing protein [Desulfovibrio vulgaris DP4]
gi|46448466|gb|AAS95120.1| chemotaxis protein PomB [Desulfovibrio vulgaris str. Hildenborough]
gi|120563592|gb|ABM29336.1| OmpA/MotB domain protein [Desulfovibrio vulgaris DP4]
gi|311232899|gb|ADP85753.1| OmpA/MotB domain protein [Desulfovibrio vulgaris RCH1]
Length = 257
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 53/138 (38%), Gaps = 5/138 (3%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI 85
+ + S+ + + V F+ S + P V+ + + L KH D ++
Sbjct: 118 NEQAEIAKNAIISAEEGGINLRVNSRALFEPGSARLLPDGEAVIRLVHTILLKHKYDLIV 177
Query: 86 EGHADELGSR----NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
EGH + L RA + + ++ G+S R+K YG P V +D+
Sbjct: 178 EGHTGSREPFSSQFPTHWELSAARAVTLVRHILSLGVSPRRLKAVGYGDTRPLVPENDDT 237
Query: 142 AYAKNRRAIVFLKGCRAN 159
NRR F + AN
Sbjct: 238 GE-LNRRVEFFFRPQSAN 254
>gi|90022072|ref|YP_527899.1| putative outer membrane protein [Saccharophagus degradans 2-40]
gi|89951672|gb|ABD81687.1| OmpA/MotB [Saccharophagus degradans 2-40]
Length = 322
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 10/95 (10%)
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+ F I+GH D G R ++ L RA V Y RGI + + +G+ P
Sbjct: 210 HDNKLRMFYIDGHTDSNGDRAENLELSKTRAELVSTYLKRRGIPEDWIVIRWHGERYPVA 269
Query: 136 YGHDEDAYAKNRRAIVFLK----------GCRANT 160
+ A+NRR V L+ G +++T
Sbjct: 270 SNATVNGRARNRRVTVRLERIEEIDVLPLGGKSDT 304
>gi|1171900|sp|P45996|OMP53_HAEIN RecName: Full=Outer membrane protein P5; Short=OMP P5; AltName:
Full=Fimbrin; Flags: Precursor
gi|305373|gb|AAA24959.1| fimbrial protein [Haemophilus influenzae]
Length = 359
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 54/138 (39%), Gaps = 10/138 (7%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG-SWLEKHDCDFLIEGH 88
+ + + + S+ V F +++P L ++ + + G+
Sbjct: 222 QGEAPVVAAPEMVSKTFSLNSDVTFAFGKANLKPQAQATLDSVYGEISQVKSRKVAVAGY 281
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY--- 143
+ +GS ++ L RA +V NYFVA+G++A + T YG+ P
Sbjct: 282 TNRIGSDAFNVKLSQERADSVANYFVAKGVAADAISATGYGEANPVTGATCDQVKGRKAL 341
Query: 144 ----AKNRRAIVFLKGCR 157
A +RR + + G +
Sbjct: 342 IACLAPDRRVEIAVNGTK 359
>gi|330901158|gb|EGH32577.1| OmpA/MotB [Pseudomonas syringae pv. japonica str. M301072PT]
Length = 451
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 51/149 (34%), Gaps = 7/149 (4%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
+ A + + L + ++ + + + + + F S + Q
Sbjct: 307 AIVAQSGFVAQTVQVLKVQPTAQMPA--DYQALARKAERLSVNFRFAQGSARLDNKAQQD 364
Query: 69 LSNLGSWLEKH---DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
L + +L+ + + G D + L RA AV + G++ +
Sbjct: 365 LKRVADYLKTSGKLNQHVTLVGFGDAKSDPERAALLSRLRAMAVRRELLKSGVTFRDI-- 422
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G EMP +D KNRR V+++
Sbjct: 423 VGLGDEMPVATNEIDDGRIKNRRVEVWVQ 451
>gi|153836574|ref|ZP_01989241.1| outer membrane protein [Vibrio parahaemolyticus AQ3810]
gi|149750172|gb|EDM60917.1| outer membrane protein [Vibrio parahaemolyticus AQ3810]
Length = 284
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 52/141 (36%), Gaps = 1/141 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
T D + N+ ++ + + F S I P + L+ L H
Sbjct: 118 TQTACTPPDDIDALRNDLNIVADIYALLNVDNQFAIDSAEINPKYMGHLAEAAYILRDHP 177
Query: 81 C-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
++ GHAD G+ + L RA V Y G+++ R++ S G +P G
Sbjct: 178 ALSLVVTGHADVTGTPEHNKKLAQERAEQVKRYLSVFGVTSDRVQTKSVGDTLPLYEGQT 237
Query: 140 EDAYAKNRRAIVFLKGCRANT 160
NRR + + +++
Sbjct: 238 PAVRLTNRRVSIEVLSANSDS 258
>gi|170720302|ref|YP_001747990.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619]
gi|169758305|gb|ACA71621.1| OmpA/MotB domain protein [Pseudomonas putida W619]
Length = 324
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 35/73 (47%)
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ GH+D G+R ++ RRA AV +Y A G+ ++ V +G+ P +
Sbjct: 208 NHIELNGHSDNSGNRLTNRDTSRRRALAVADYLKAHGVPEEQITVRFHGERYPLAKNNSA 267
Query: 141 DAYAKNRRAIVFL 153
A+NRR + L
Sbjct: 268 ANRARNRRVNIEL 280
>gi|86751586|ref|YP_488082.1| hypothetical protein RPB_4488 [Rhodopseudomonas palustris HaA2]
gi|86574614|gb|ABD09171.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
Length = 341
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 47/117 (40%), Gaps = 11/117 (9%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIEGHADELGS---RN 96
VFFDT + P L L + L + D ++GH D
Sbjct: 222 FQSEVFFDTGQALLLPEGRAELDKLAAALTELDKKIPSEIPWVLRVDGHTDRRPITGVFK 281
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA +V Y V+ G+ A R+ + + P + ++AY +NRR + L
Sbjct: 282 SNWELSSARAISVVQYLVSLGVPAQRLVAAGFAEFQPLDTANTDEAYRRNRRIELKL 338
>gi|42527651|ref|NP_972749.1| OmpA family protein [Treponema denticola ATCC 35405]
gi|41818479|gb|AAS12668.1| OmpA family protein [Treponema denticola ATCC 35405]
Length = 449
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 34/75 (45%)
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
FLIEGH +L L ++RA + + RGI SR+ YG P +
Sbjct: 372 PYTKFLIEGHTADLNRPEDEKILSVQRAERIADEISKRGIDRSRIMTAGYGSTRPVAPSN 431
Query: 139 DEDAYAKNRRAIVFL 153
+E AKNRR + +
Sbjct: 432 NETNMAKNRRVEITV 446
>gi|114320611|ref|YP_742294.1| OmpA/MotB domain-containing protein [Alkalilimnicola ehrlichii
MLHE-1]
gi|114227005|gb|ABI56804.1| OmpA/MotB domain protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 324
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/154 (20%), Positives = 58/154 (37%), Gaps = 18/154 (11%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQ----------------FSSSVGDSVFFDTSSY 59
++ + + D +++ D Q ++ G +V+F
Sbjct: 167 LACTAHRDGDAAMATGDAAGPLPDWARQGHETAGTGAPDDDTVPLPAAPGATVYFGFDHA 226
Query: 60 SIRPADIQVLSNLGSW--LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG 117
+ L+ + + H + GH D G + + LG RRA AV + RG
Sbjct: 227 GLTRTAKDALARFANQAGDDPHLQVIVAVGHTDSAGPADYNERLGARRAEAVRAELMRRG 286
Query: 118 ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
I+ R+++ S G+ P++ D A NRR V
Sbjct: 287 IADERIRLRSLGERQPAMAEDDGYGRAANRRVEV 320
>gi|238789280|ref|ZP_04633067.1| Outer membrane protein A [Yersinia frederiksenii ATCC 33641]
gi|238722612|gb|EEQ14265.1| Outer membrane protein A [Yersinia frederiksenii ATCC 33641]
Length = 357
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/158 (20%), Positives = 66/158 (41%), Gaps = 12/158 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + +S D ++ + + + ++ V F + +++P Q L
Sbjct: 192 GMLSVGVSYRFGQDDAVAPVAPAPAPAPVVDTKRFTLKSDVLFAFNKSTLKPEGQQALDQ 251
Query: 72 LGSW---LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L S ++ D ++ G AD +G ++AL RRA +V +Y V++GI A ++
Sbjct: 252 LYSQLSSIDPKDGSVVVLGFADRIGQPAPNLALSQRRADSVRDYLVSKGIPAEKITARGE 311
Query: 129 GKEMPSVYGHDE---------DAYAKNRRAIVFLKGCR 157
G+ P + D A +RR + +KG +
Sbjct: 312 GQANPVTGNTCDNVKPRAALIDCLAPDRRVEIEVKGYK 349
>gi|163755499|ref|ZP_02162618.1| putative flagellar motor protein MotB [Kordia algicida OT-1]
gi|161324412|gb|EDP95742.1| putative flagellar motor protein MotB [Kordia algicida OT-1]
Length = 286
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 55/145 (37%), Gaps = 7/145 (4%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
++I I PD +N S+ D + F + SY++ VL +
Sbjct: 121 VTLAIVSSLKKAVGIDDPDIEINVEKGV--VFISIADKLLFKSGSYNVTDKAKVVLGKVA 178
Query: 74 SWLE-KHDCDFLIEGHADELGSR----NSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
+ K + + ++EGH D + + L ++R+ ++ G++ ++
Sbjct: 179 KVVNSKPNFECMVEGHTDNVPYNKGVLIDNWDLSVKRSTSIIRVLQELGVNPGQLIAAGR 238
Query: 129 GKEMPSVYGHDEDAYAKNRRAIVFL 153
+P V + A NRR + +
Sbjct: 239 SYYVPLVENDTPENRATNRRTRIVV 263
>gi|119385179|ref|YP_916235.1| OmpA/MotB domain-containing protein [Paracoccus denitrificans
PD1222]
gi|119374946|gb|ABL70539.1| OmpA/MotB domain protein [Paracoccus denitrificans PD1222]
Length = 463
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 39/119 (32%), Gaps = 8/119 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDCDFLIEGHADELGSRNSSIA 100
D F ++ S+ PA ++ +G + GH D + + S+
Sbjct: 342 LVVRASDPEVFRSAKASLNPAYQPLVEAIGRTVVANAHRIGAVAVSGHTDNVPVQRSNPF 401
Query: 101 LGLR-----RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ RA V A G+ A + P D A+NRR + ++
Sbjct: 402 ASNQGLSEARAETVAQALAAAGVPAELISAEGRADSQPVGDNATRDGRAQNRRIEIRIE 460
>gi|300692122|ref|YP_003753117.1| outer membrane protein, ompA domain [Ralstonia solanacearum PSI07]
gi|299079182|emb|CBJ51850.1| putative outer membrane protein, ompA domain [Ralstonia
solanacearum PSI07]
Length = 218
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 49/122 (40%), Gaps = 9/122 (7%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FD ++P L +L S L+ + +I GH D GS + L +R
Sbjct: 95 VTFAADALFDFDKAVLKPEGKAKLDDLVSKLKNITLEVVIAVGHTDSFGSDKYNDRLSVR 154
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD--------EDAYAKNRRAIVFLKGC 156
RA AV Y V++GI A+R+ GK V NRR V + G
Sbjct: 155 RAEAVKGYLVSKGIEANRVYTEGKGKRQLKVDPKSCKGSRKAQIACQQPNRRVEVEVVGT 214
Query: 157 RA 158
R+
Sbjct: 215 RS 216
>gi|45758067|gb|AAO85792.1| heat-modifiable outer membrane protein [Mannheimia glucosida]
Length = 367
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 12/143 (8%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIE 86
E+ + + V FD S++PA L + + +
Sbjct: 224 GQGAAPVEAPEVVTKNFAFSSDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANPAIQVN 283
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV--YGHDEDAY- 143
G+ D +G S++ L RRA V NY V++G + + + YG+ P
Sbjct: 284 GYTDRIGKEASNLKLSQRRAETVANYIVSKGTNPANVTAVGYGEANPVTGHTCDAVKGRK 343
Query: 144 ------AKNRRAIVFLKGCRANT 160
A +RR + ++G + T
Sbjct: 344 ALIACLAPDRRVEIQVQGSKEVT 366
>gi|83749098|ref|ZP_00946103.1| Outer membrane protein [Ralstonia solanacearum UW551]
gi|83724219|gb|EAP71392.1| Outer membrane protein [Ralstonia solanacearum UW551]
Length = 218
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 49/122 (40%), Gaps = 9/122 (7%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FD + ++P L +L S L+ +I GH D GS + L +R
Sbjct: 95 VTFAADALFDFNKAVLKPEGKAKLDDLVSKLKNITLKVVIAVGHTDSFGSDKYNDRLSVR 154
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD--------EDAYAKNRRAIVFLKGC 156
RA AV Y V++GI A+R+ GK V NRR V + G
Sbjct: 155 RAEAVKGYLVSKGIEANRVYTEGKGKRQLKVDPKSCKGARKAQIACQQPNRRVEVEVVGT 214
Query: 157 RA 158
R+
Sbjct: 215 RS 216
>gi|299069861|emb|CBJ41142.1| putative transmembrane protein, OmpA/MotB motif [Ralstonia
solanacearum CMR15]
Length = 215
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 47/116 (40%), Gaps = 10/116 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD----FLIEGHADELGSRN----- 96
+ SV F +S ++P +++L +L L + ++ G AD+
Sbjct: 85 IGISGSVLFALNSDQLQPEGLELLKSLAGPLSAYLRSRDEILMVSGFADDQQVHAGNRRF 144
Query: 97 -SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ L +RA V + GI + + ++G E P D+ AKNRR +
Sbjct: 145 ADNWELSAKRALTVTRTLIDAGIPGASVFAAAFGSEQPVSSNADDAGRAKNRRVEI 200
>gi|15639284|ref|NP_218733.1| outer membrane protein (tpn50) [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189025526|ref|YP_001933298.1| outer membrane protein TpN50 [Treponema pallidum subsp. pallidum
SS14]
gi|586110|sp|P38369|TPN50_TREPA RecName: Full=Outer membrane protein tpn50; AltName: Full=Antigen
tpp57; Flags: Precursor
gi|3322558|gb|AAC65272.1| outer membrane protein (tpn50) [Treponema pallidum subsp. pallidum
str. Nichols]
gi|7144504|gb|AAA20517.2| TpN50 precursor [Treponema pallidum]
gi|189018101|gb|ACD70719.1| outer membrane protein TpN50 [Treponema pallidum subsp. pallidum
SS14]
gi|291059692|gb|ADD72427.1| outer membrane protein Tpn50 (Antigen tpp57) [Treponema pallidum
subsp. pallidum str. Chicago]
Length = 417
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 46/123 (37%), Gaps = 3/123 (2%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADE 91
+E + S+ ++V FD S S+ P++ + L + L L+ GHA
Sbjct: 293 PDAKVRETEEGVTISI-ENVQFDADSASLAPSEYEKLRKIAELLRAFPDRELLVSGHAAR 351
Query: 92 LGSRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
GS + RA V Y + A+ + G + ED KNRR
Sbjct: 352 RGSVQDQQRISEERADVVARYLQELGVVDAAHVYTRGCGAQQSIAPNDSEDGRRKNRRVE 411
Query: 151 VFL 153
+ +
Sbjct: 412 ITI 414
>gi|332297244|ref|YP_004439166.1| OmpA/MotB domain protein [Treponema brennaborense DSM 12168]
gi|332180347|gb|AEE16035.1| OmpA/MotB domain protein [Treponema brennaborense DSM 12168]
Length = 436
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 51/144 (35%), Gaps = 2/144 (1%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL 72
S + ++ +I + E+ + +++ F S + ++ L +
Sbjct: 291 FASRSADRLADVRERIDQLGIENAQVRADEKGLTISLENIQFKADSAVLLESEKMKLRKI 350
Query: 73 GSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGK 130
L + LI GH G+ S AL +RA AV Y + + + G
Sbjct: 351 AEILSLFPENDLLITGHTALAGTAASRTALSEQRAKAVAEYLMQLGIRDSYHIFTQGLGG 410
Query: 131 EMPSVYGHDEDAYAKNRRAIVFLK 154
E P E A+NRR + +
Sbjct: 411 EHPIAPNTTEANKARNRRVEITVM 434
>gi|238024317|ref|YP_002908549.1| hypothetical protein bglu_2g09050 [Burkholderia glumae BGR1]
gi|237878982|gb|ACR31314.1| OmpA/MotB [Burkholderia glumae BGR1]
Length = 236
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 48/131 (36%), Gaps = 10/131 (7%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG----SWLEKHDCDFLIE 86
+ + +V F +S ++P +L +L ++L D ++
Sbjct: 70 AGPLAAGRVTLVDGRIGISGNVLFAVNSDQLQPQGRALLRSLAGPLSAYLRDRDQILMVS 129
Query: 87 GHADELGSRN------SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
G AD+ + L RA V F+ G+ A + ++G E P DE
Sbjct: 130 GFADDQQVHAGNARFADNWELSAERALTVTRAFIEAGVPAGSVFAAAFGSEQPVSSNADE 189
Query: 141 DAYAKNRRAIV 151
AKNRR +
Sbjct: 190 AGRAKNRRVEI 200
>gi|207725377|ref|YP_002255773.1| outer membrane protein [Ralstonia solanacearum MolK2]
gi|207743944|ref|YP_002260336.1| outer membrane protein [Ralstonia solanacearum IPO1609]
gi|300704759|ref|YP_003746362.1| outer membrane protein, ompa domain [Ralstonia solanacearum
CFBP2957]
gi|206590613|emb|CAQ37575.1| outer membrane protein [Ralstonia solanacearum MolK2]
gi|206595346|emb|CAQ62273.1| outer membrane protein [Ralstonia solanacearum IPO1609]
gi|299072423|emb|CBJ43768.1| putative outer membrane protein, ompA domain [Ralstonia
solanacearum CFBP2957]
Length = 218
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 49/122 (40%), Gaps = 9/122 (7%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FD ++P L +L S L+ + +I GH D GS + L +R
Sbjct: 95 VTFAADALFDFDKAVLKPEGKAKLDDLVSKLKNITLEVVIAVGHTDSFGSDKYNDRLSVR 154
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD--------EDAYAKNRRAIVFLKGC 156
RA AV Y V++GI A+R+ GK V NRR V + G
Sbjct: 155 RAEAVKGYLVSKGIEANRVYTEGKGKRQLKVDPKSCKGARKAQIACQQPNRRVEVEVVGT 214
Query: 157 RA 158
R+
Sbjct: 215 RS 216
>gi|45758069|gb|AAO85793.1| heat-modifiable outer membrane protein [Mannheimia glucosida]
gi|45758071|gb|AAO85794.1| heat-modifiable outer membrane protein [Mannheimia glucosida]
Length = 367
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 12/143 (8%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIE 86
E+ + + V FD S++PA L + + +
Sbjct: 224 GQGAAPVEAPEVVTKNFAFSSDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANPAIQVN 283
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV--YGHDEDAY- 143
G+ D +G S++ L RRA V NY V++G + + + YG+ P
Sbjct: 284 GYTDRIGKEASNLKLSQRRAETVANYIVSKGTNPANVTAVGYGEANPVTGHTCDAVKGRK 343
Query: 144 ------AKNRRAIVFLKGCRANT 160
A +RR + ++G + T
Sbjct: 344 ALIACLAPDRRVEIQVQGSKEVT 366
>gi|300775912|ref|ZP_07085772.1| OmpA family protein [Chryseobacterium gleum ATCC 35910]
gi|300505462|gb|EFK36600.1| OmpA family protein [Chryseobacterium gleum ATCC 35910]
Length = 277
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 47/130 (36%), Gaps = 7/130 (5%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHAD 90
D + L+ S+ D + + T Y+I PA +VL + + +D LIEG+ D
Sbjct: 132 DEDVQVKVLKGVVMISLSDKMLYKTGDYNILPAAQEVLGKVAKVINDYDKYSVLIEGNTD 191
Query: 91 -----ELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYA 144
+ L R +V + + +R+ + P A
Sbjct: 192 NAPLNSPNLPRDNWDLSALRGTSVAKVLQTQFGVDPARITAGGRSEYNPKATNMSVSGRA 251
Query: 145 KNRRAIVFLK 154
+NRR + +
Sbjct: 252 ENRRTEIIIM 261
>gi|90409039|ref|ZP_01217166.1| sodium-type flagellar protein MotY [Psychromonas sp. CNPT3]
gi|90309846|gb|EAS38004.1| sodium-type flagellar protein MotY [Psychromonas sp. CNPT3]
Length = 232
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYAVFN 111
+ + + + L +G +++ + L+ G++D G+ + ++AL +RA A+ +
Sbjct: 126 YAKNGVQLDTFSKKRLKMIGDYIQYDENISVILLSGYSDAYGTESHNMALSTKRAEAIKS 185
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
Y G+ + +++V S+G++ + +NRR ++ ++
Sbjct: 186 YLKEIGMQSDKIQVASFGEKHHVADNSNILGRIQNRRVVISIE 228
>gi|251792544|ref|YP_003007270.1| outer membrane protein A [Aggregatibacter aphrophilus NJ8700]
gi|247533937|gb|ACS97183.1| outer membrane protein A [Aggregatibacter aphrophilus NJ8700]
Length = 363
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 52/138 (37%), Gaps = 10/138 (7%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGH 88
+ ++ V F + ++RP L + S + + + + + G+
Sbjct: 226 GQGAAPIVAPEVATKVFTLKSDVTFAFNKANLRPNAQATLDGIYSEIAKVNKPNVAVSGY 285
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE-------- 140
D +GS + L +RA V NY V++G++ + T YGK P
Sbjct: 286 TDRIGSDAYNQKLSQKRAETVANYLVSKGVAQDTISATGYGKANPVTGNQCNAVKGRKAL 345
Query: 141 -DAYAKNRRAIVFLKGCR 157
A +RR + + G +
Sbjct: 346 IACLADDRRVEIAVNGNQ 363
>gi|94497343|ref|ZP_01303914.1| OmpA/MotB [Sphingomonas sp. SKA58]
gi|94423206|gb|EAT08236.1| OmpA/MotB [Sphingomonas sp. SKA58]
Length = 358
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
VFF+ I P +L N + ++ ++ GHAD+ GS + ++ L RRA
Sbjct: 247 PYIVFFEWDKSDITPDAATILDNAVSAYSSCGSAQVMLAGHADKSGSASYNVGLSQRRAD 306
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+V Y ++GI M ++G+ P V D +NRR +
Sbjct: 307 SVKAYLASKGIPDGVMTTEAFGESRPRVETADGVREVQNRRVEIT 351
>gi|301156596|emb|CBW16067.1| outer membrane protein A (3a;II*;G;d) [Haemophilus parainfluenzae
T3T1]
Length = 361
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 52/138 (37%), Gaps = 10/138 (7%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGH 88
+ + ++ V F +++P L + + + ++ + + G+
Sbjct: 224 GQGAAPVVAPEVVSKTFNLSSDVTFAFGKANLKPQAKATLDGIYGEIAQINNANVAVAGY 283
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY--- 143
D +G ++ L RRA +V NY VA+G+ A + +GK P
Sbjct: 284 TDRIGKDAPNVKLSQRRADSVANYLVAKGVPAQSISAVGHGKANPVTGSTCDAVKGRKAL 343
Query: 144 ----AKNRRAIVFLKGCR 157
A +RR + + G +
Sbjct: 344 IACLAPDRRVEIAVNGTK 361
>gi|289673872|ref|ZP_06494762.1| OmpA/MotB [Pseudomonas syringae pv. syringae FF5]
Length = 447
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 51/149 (34%), Gaps = 7/149 (4%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
+ A + + L + ++ + + + + + F S + Q
Sbjct: 303 AIVAQSGFVAQTVQVLKVQPTAQMPA--DYQALARKAERLSVNFRFAQGSARLDNKAQQD 360
Query: 69 LSNLGSWLEKH---DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
L + +L+ D + G D + L RA AV + G++ +
Sbjct: 361 LKRVADYLKTSGKLDQHVTLVGFGDAKSDPERAALLSRLRAMAVRRELLKSGVTFRDI-- 418
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G EMP +D KNRR V+++
Sbjct: 419 VGLGDEMPVATNEIDDGRIKNRRVEVWVQ 447
>gi|308094644|ref|ZP_05890943.2| outer membrane protein [Vibrio parahaemolyticus AN-5034]
gi|308095659|ref|ZP_05907392.2| outer membrane protein [Vibrio parahaemolyticus Peru-466]
gi|308126475|ref|ZP_05910381.2| outer membrane protein [Vibrio parahaemolyticus AQ4037]
gi|308087973|gb|EFO37668.1| outer membrane protein [Vibrio parahaemolyticus Peru-466]
gi|308091063|gb|EFO40758.1| outer membrane protein [Vibrio parahaemolyticus AN-5034]
gi|308107721|gb|EFO45261.1| outer membrane protein [Vibrio parahaemolyticus AQ4037]
Length = 284
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 52/141 (36%), Gaps = 1/141 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
T D + N+ ++ + + F S I P + L+ L H
Sbjct: 118 TQTTCTPPDDIDALRNDLNIVADIYALLNVDNQFAIDSAEINPKYMGHLAEAAYILRDHP 177
Query: 81 C-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
++ GHAD G+ + L RA V Y G+++ R++ S G +P G
Sbjct: 178 ALSLVVTGHADVTGTPEHNKKLAQERAEQVKRYLSVFGVTSDRVQTKSVGDTLPLYEGQT 237
Query: 140 EDAYAKNRRAIVFLKGCRANT 160
NRR + + +++
Sbjct: 238 PAVRLTNRRVSIEVLSANSDS 258
>gi|152978717|ref|YP_001344346.1| OmpA domain-containing protein [Actinobacillus succinogenes 130Z]
gi|150840440|gb|ABR74411.1| OmpA domain protein transmembrane region-containing protein
[Actinobacillus succinogenes 130Z]
Length = 356
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 56/141 (39%), Gaps = 10/141 (7%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGH 88
+ + ++ V F + +++P L + S + + + G+
Sbjct: 215 GQGAAPVAAPEVVNKTFTLNSDVTFGFNKSTLKPEAASTLDGIYSEIAQVSSPAVAVNGY 274
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE-------- 140
AD +G +++ L RRA V NY V++G+ ++ + T YG P +
Sbjct: 275 ADRIGKDAANLKLSQRRAETVANYLVSKGVDSNAITATGYGSANPVTGNTCDAVKGRKAL 334
Query: 141 -DAYAKNRRAIVFLKGCRANT 160
A +RR V ++G + T
Sbjct: 335 IACLAPDRRVEVQVQGNKQAT 355
>gi|307246787|ref|ZP_07528853.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|307251124|ref|ZP_07533047.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
4 str. M62]
gi|307255770|ref|ZP_07537572.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|307260222|ref|ZP_07541930.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|306852258|gb|EFM84497.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|306856856|gb|EFM88989.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
4 str. M62]
gi|306861233|gb|EFM93225.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|306865669|gb|EFM97549.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
Length = 364
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/155 (20%), Positives = 56/155 (36%), Gaps = 12/155 (7%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
IS + + + E + + V F +++PA L + + +
Sbjct: 209 ISSVSAGLSYRFGQGAAPVAAPAVETKNFAFSSDVLFAFGKSNLKPAAATALDAMQTEIN 268
Query: 78 KHDCD---FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
+ G+ D +G S++ L RRA V NY V++G A+ + YG+ P
Sbjct: 269 NAGLSNAAIQVNGYTDRIGKEASNLKLSQRRAETVANYIVSKGAPAANVTAVGYGEANPV 328
Query: 135 --VYGHDEDAY-------AKNRRAIVFLKGCRANT 160
A +RR V ++G + T
Sbjct: 329 TGATCDKVKGRKALIACLAPDRRVEVQVQGTKEVT 363
>gi|296284930|ref|ZP_06862928.1| peptidoglycan-associated protein [Citromicrobium bathyomarinum
JL354]
Length = 371
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
VFF+ I P VL+N + ++ + ++ G+ D G+ ++ L RR
Sbjct: 260 PYIVFFNWDRSDITPEAASVLNNAISAYQNCGNASVMLAGYTDRSGTVQYNLGLAARRNA 319
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+V Y RGI +R+ ++G+ P V D +NRR +
Sbjct: 320 SVRQYMTGRGIPDARISSEAFGEANPRVPTADGVRELQNRRVEIT 364
>gi|209519379|ref|ZP_03268177.1| OmpA/MotB domain protein [Burkholderia sp. H160]
gi|209500193|gb|EEA00251.1| OmpA/MotB domain protein [Burkholderia sp. H160]
Length = 217
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 10/116 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLG----SWLEKHDCDFLIEGHADELG------SR 95
+ +V F +S ++P +L +L ++L D ++ G D+
Sbjct: 85 IGISGNVLFALNSAQLQPEGRALLKSLAGPLSAYLRASDQILMVSGFTDDQRLREGNRRF 144
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ L +RA V + G+ AS + ++G E P DE AKNRR +
Sbjct: 145 ADNWELSAQRALTVTRALIDEGVPASSVFAAAFGSEQPVSSNADEPGRAKNRRVEI 200
>gi|332702472|ref|ZP_08422560.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay]
gi|332552621|gb|EGJ49665.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay]
Length = 239
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 10/120 (8%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ ++ FFD+ S + P +++L +G L +EGH D + +S+
Sbjct: 115 VAINLHGPAFFDSGSAELTPDAVRMLRKIGVVLVGVPYHLTVEGHTDNVPIQTGAFDSNW 174
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA------KNRRAIVFL 153
L RA V + +++G+ MK+ P + +D A +NRR ++ +
Sbjct: 175 ELSALRATRVARFLISQGVRPDNMKIVGLADTRPLLPNNDASGAALPENQTRNRRVVILV 234
>gi|119896572|ref|YP_931785.1| hypothetical protein azo0281 [Azoarcus sp. BH72]
gi|119668985|emb|CAL92898.1| conserved hypothetical outer membrane protein [Azoarcus sp. BH72]
Length = 214
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 44/130 (33%), Gaps = 10/130 (7%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHA- 89
+ + + SV F +S ++P Q+L +L L +
Sbjct: 69 AVPLASGRVTLANGRIGISGSVLFALNSDELQPDGRQLLKSLAPPLAAYLASHDEMLMVS 128
Query: 90 ---------DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
D + L +RA V V G+ ++ + ++G+E P D
Sbjct: 129 GFTDDRPVRDSNRQFADNWELSAQRALTVTRVLVEEGVPSAAVFAAAFGQEQPVASNADA 188
Query: 141 DAYAKNRRAI 150
D A+NRR
Sbjct: 189 DGRARNRRVE 198
>gi|17549701|ref|NP_523041.1| hypothetical protein RS03061 [Ralstonia solanacearum GMI1000]
gi|17431956|emb|CAD18633.1| putative outer membrane transmembrane protein [Ralstonia
solanacearum GMI1000]
Length = 215
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 47/116 (40%), Gaps = 10/116 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD----FLIEGHADELGSRN----- 96
+ SV F +S ++P +++L +L L + ++ G AD+
Sbjct: 85 IGISGSVLFALNSDQLQPEGLELLKSLAGPLSAYLRSRDEILMVSGFADDQQVHAGNRRF 144
Query: 97 -SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ L +RA V + GI + + ++G E P D+ AKNRR +
Sbjct: 145 ADNWELSAKRALTVTRALIDAGIPGASVFAAAFGSEQPVSSNADDAGRAKNRRVEI 200
>gi|85705152|ref|ZP_01036252.1| OmpA family protein [Roseovarius sp. 217]
gi|85670474|gb|EAQ25335.1| OmpA family protein [Roseovarius sp. 217]
Length = 219
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 57/119 (47%), Gaps = 4/119 (3%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNS 97
L +F+S V +V F +S + L W+ + F + GH D +GS +
Sbjct: 59 DLANRFASEVLSTVNFAFNSAELDTGARDTLREQARWIRQFPEVRFRVYGHTDAVGSDSY 118
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVT-SYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+ LG+RRA AV + ++GIS +R++ S+G+ P + + NRR + + G
Sbjct: 119 NKTLGMRRAQAVVAFLSSQGISRARLEAVASFGETQPLIVTDGRERR--NRRTVTEVSG 175
>gi|328676430|gb|AEB27300.1| Outer membrane lipoprotein omp16 precursor [Francisella cf.
novicida Fx1]
Length = 417
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 65/179 (36%), Gaps = 26/179 (14%)
Query: 2 QYSTIFIILSAITMMSISGI-DNLDTKISSPDTVLNESSLQEQFSSS------------- 47
+ + ++ S +T +S D+ D E E S+
Sbjct: 3 KLLKLCLMTSLLTTLSACQTLDDKDKDSGPLTFPTLEPCTAELLQSNQSFICVKEQTGPD 62
Query: 48 -VGDSVFFDTSSYSIRPADIQVLSNLGSW----------LEKHDCDFLIEGHADELGSRN 96
+ ++ FD SY++ +VL L ++ ++ + + D+ +
Sbjct: 63 LIETNIKFDADSYTLNTQAKEVLDKLFAYLKLTDTTNFTIKGYAGKVESKILTDQKILTD 122
Query: 97 SSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+I L RA +V Y V +G S+ + + + G + P + A N+R + LK
Sbjct: 123 YNIRLSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDSTSSRAINQRVEITLK 181
>gi|260779363|ref|ZP_05888255.1| sodium-type flagellar protein MotY precursor [Vibrio
coralliilyticus ATCC BAA-450]
gi|260605527|gb|EEX31822.1| sodium-type flagellar protein MotY precursor [Vibrio
coralliilyticus ATCC BAA-450]
Length = 293
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYA 108
+ +D SS + A + L+ + ++ + L+ + S+++S L +RA
Sbjct: 184 ILHYDRSSVQLNKASQKRLAQIAEYIRHNQDIDLVLVSTYTSNEESKSASQNLSEQRAEV 243
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +YF + G+ R++V YG+ P KNRR ++ L
Sbjct: 244 LRDYFKSLGLPEDRIQVQGYGRRRPVADNASPLGKDKNRRVVISL 288
>gi|162453404|ref|YP_001615771.1| putative outer membrane protein [Sorangium cellulosum 'So ce 56']
gi|161163986|emb|CAN95291.1| putative outer membrane protein [Sorangium cellulosum 'So ce 56']
Length = 263
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/120 (16%), Positives = 37/120 (30%), Gaps = 10/120 (8%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF----LIEGHADELGS----R 95
S+ V FD+ ++ Q+L + + + GH D
Sbjct: 128 MVISLPGDVLFDSGKDTLSKDGQQILKKISDVIRGDKSLVDRDYQVAGHTDSQPYKSGPF 187
Query: 96 NSSIALGLRRAYAVFNYFVAR--GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L L RA AV + + + + + P + KNRR + +
Sbjct: 188 QDNWGLSLMRARAVLLFLIGKEGQLPTRHWSAAGFADTDPIASNNTPAGKQKNRRCDLIV 247
>gi|325567537|ref|ZP_08144204.1| flagellar motor protein B [Enterococcus casseliflavus ATCC 12755]
gi|325158970|gb|EGC71116.1| flagellar motor protein B [Enterococcus casseliflavus ATCC 12755]
Length = 256
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 47/139 (33%), Gaps = 7/139 (5%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDC 81
+ + S + ++ S+ F + S I Q L L +
Sbjct: 110 SQELAASGLKDQTEVRLESDGLHITLASSILFASGSAEITDTTRQSLDLLSDSLKKLKAN 169
Query: 82 DFLIEGHADELGS-----RNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSV 135
+I GH D + S+ L RA V YF+++G + ++ P
Sbjct: 170 KIVIAGHTDNVPEKGNGRYQSNWDLSSARAITVMEYFISKGAVLEKNAAIQAFADTEPKA 229
Query: 136 YGHDEDAYAKNRRAIVFLK 154
+ ++NRR + ++
Sbjct: 230 DNNTPQGRSENRRVEMIIQ 248
>gi|260574615|ref|ZP_05842618.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
gi|259023032|gb|EEW26325.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
Length = 213
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 4/142 (2%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
G ++ + + +L +F++ V +V F+ +S + A L +W+ +
Sbjct: 35 GNATMNNTLIQSGQLDYAVALGGRFAAEVPTTVNFEFNSAVLDGAAQAALDQQANWIRQF 94
Query: 80 D-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV-TSYGKEMPSVYG 137
F + GHAD +GS + ALGL+RA AV +Y +RGIS SR++ SYG+ P V
Sbjct: 95 PEVRFRVYGHADRVGSNGYNHALGLKRARAVVSYLNSRGISRSRLEAMVSYGETRPVVDT 154
Query: 138 HDEDAYAKNRRAIVFLKGCRAN 159
+ NRR + + G N
Sbjct: 155 LGPEVR--NRRTVTEVSGFVQN 174
>gi|37525710|ref|NP_929054.1| outer membrane protein A [Photorhabdus luminescens subsp. laumondii
TTO1]
gi|36785139|emb|CAE14068.1| Outer membrane protein A precursor (Outer membrane protein II*)
[Photorhabdus luminescens subsp. laumondii TTO1]
Length = 368
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 53/123 (43%), Gaps = 13/123 (10%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGS---WLEKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ +S ++ L L + ++ + L+ G+ D +G + L
Sbjct: 235 TLRSDVLFEFASSELKAEGKHNLDQLYTELANIDPNQGKVLVLGYTDRIGKDVYNQKLSQ 294
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD---------EDAYAKNRRAIVFLK 154
+RA +V +Y V++GI + + +GK P G + A +RR + ++
Sbjct: 295 KRAQSVVDYLVSKGIPSGSISAEGHGKANPV-TGSTCDKVHKPNLINCLAPDRRVEIEIQ 353
Query: 155 GCR 157
G +
Sbjct: 354 GTK 356
>gi|110086793|gb|ABG49460.1| hemagglutinin antigen [Avibacterium paragallinarum]
Length = 345
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 10/120 (8%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRR 105
++ V F ++RP VL + + + + G+ D +GS +++ L RR
Sbjct: 225 ALNSDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDVAGYTDRIGSEAANLKLSQRR 284
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLKGC 156
A V NY V++G++ + T YG+ P A +RR + +KG
Sbjct: 285 ADTVANYLVSKGVAQEVISSTGYGEANPVTGAKCDAVKGRKALIACLADDRRVEISVKGN 344
>gi|48249486|gb|AAT40989.1| hemagglutinin antigen [Avibacterium paragallinarum]
Length = 345
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 10/120 (8%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRR 105
++ V F ++RP VL + + + + G+ D +GS +++ L RR
Sbjct: 225 ALNSDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDVAGYTDRIGSEAANLKLSQRR 284
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLKGC 156
A V NY V++G++ + T YG+ P A +RR + +KG
Sbjct: 285 ADTVANYLVSKGVAQEVISSTGYGEANPVTGAKCDAVKGRKALIACLADDRRVEISVKGN 344
>gi|330864159|emb|CBX74225.1| hypothetical protein YEW_BY08350 [Yersinia enterocolitica W22703]
Length = 206
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 30/78 (38%), Gaps = 1/78 (1%)
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSV 135
+ LI GH+D GS + ++ + +RA V ++ + A + G P
Sbjct: 119 QHQGRKVLIIGHSDNTGSASFNMTISEQRAVVVRDWLIKNSALAKEDFIIRGMGALEPVA 178
Query: 136 YGHDEDAYAKNRRAIVFL 153
+NRR V L
Sbjct: 179 SNDTPAGQDQNRRVEVLL 196
>gi|218709831|ref|YP_002417452.1| putative outer membrane protein [Vibrio splendidus LGP32]
gi|218322850|emb|CAV19027.1| putative outer membrane protein [Vibrio splendidus LGP32]
Length = 211
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/185 (18%), Positives = 72/185 (38%), Gaps = 30/185 (16%)
Query: 1 MQYSTIFIILSAITMMSISGIDN------------LDTKISSPDTVLNESSL-------- 40
M+ + + + + +T+ + S D + D V+N
Sbjct: 10 MKITYLLLPVLTMTLFACSNQQREAYIETPEAEQIADLQDDDKDGVVNARDTCPGTPETS 69
Query: 41 ---QEQFSSSVGD------SVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHAD 90
+ ++ + F S+ + P +S + +LE + I+G+A
Sbjct: 70 QVDNDGCGETIRAEEVRQLKILFAHDSFEVNPIFSSQISTMAEFLENYKSASIEIQGYAS 129
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
++GS ++ L +RA V + ++ GI R+++ YG+E G D ++A NR+
Sbjct: 130 KVGSNEYNLDLSKKRANNVQDELLSNGIEPERVRIVGYGEERLENDGDDPTSHALNRKVT 189
Query: 151 VFLKG 155
+ G
Sbjct: 190 ATVVG 194
>gi|134302267|ref|YP_001122236.1| ompA family protein [Francisella tularensis subsp. tularensis
WY96-3418]
gi|134050044|gb|ABO47115.1| ompA family protein [Francisella tularensis subsp. tularensis
WY96-3418]
Length = 417
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 65/179 (36%), Gaps = 26/179 (14%)
Query: 2 QYSTIFIILSAITMMSISGI-DNLDTKISSPDTVLNESSLQEQFSSS------------- 47
+ + ++ S +T +S D+ D E E S+
Sbjct: 3 KLLKLCLMTSLLTTLSACQTLDDKDKDSGPLTFPTLEPCTAELLQSNQSFICVKEQTGPD 62
Query: 48 -VGDSVFFDTSSYSIRPADIQVLSNLGSW----------LEKHDCDFLIEGHADELGSRN 96
+ ++ FD SY++ +VL L ++ ++ + + D+ +
Sbjct: 63 LIETNIKFDADSYTLNTQAKEVLDKLFAYLKLTDTTNFTIKGYAGKVESKILTDQKILTD 122
Query: 97 SSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+I L RA +V Y V +G S+ + + + G + P + A N+R + LK
Sbjct: 123 YNIRLSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDSTSSRAINQRVEITLK 181
>gi|320355393|ref|YP_004196732.1| OmpA/MotB domain-containing protein [Desulfobulbus propionicus DSM
2032]
gi|320123895|gb|ADW19441.1| OmpA/MotB domain protein [Desulfobulbus propionicus DSM 2032]
Length = 201
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 42/137 (30%), Positives = 63/137 (45%), Gaps = 1/137 (0%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+G + + D + SS ++FD IR I + + G +L+
Sbjct: 65 TGRGGSGSLATDADQQSDAYKRAHGRSSPEFTPIYFDYDHSGIRSDQIPSMEHNGGYLKS 124
Query: 79 HD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+ LIEG+ D G+ ++ALG RRA + Y + GI SR++ SYG+E P G
Sbjct: 125 NSSARVLIEGNTDNRGTNEYNLALGERRAMSAKTYLIEFGIEESRIRTVSYGEERPLFNG 184
Query: 138 HDEDAYAKNRRAIVFLK 154
ED YA NRR L+
Sbjct: 185 GSEDDYAHNRRDDFILE 201
>gi|254228271|ref|ZP_04921700.1| OmpA family protein [Vibrio sp. Ex25]
gi|262394176|ref|YP_003286030.1| outer membrane protein [Vibrio sp. Ex25]
gi|151939344|gb|EDN58173.1| OmpA family protein [Vibrio sp. Ex25]
gi|262337770|gb|ACY51565.1| outer membrane protein [Vibrio sp. Ex25]
Length = 204
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 67/191 (35%), Gaps = 35/191 (18%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDT--------------------------------KI 28
M+Y I +I ++ + + S D D
Sbjct: 1 MKY--ITLIALSLMISACSSSDKGDEYDYIDTPIADQWADHLDDDSDGVINERDLCPGTP 58
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEG 87
+ + S + V F S I P + + L +L+++ I+G
Sbjct: 59 LGAEIDNDGCGSYVDSSQEMQIRVLFANDSDVINPIFTEQIRELSDFLKEYPNTSIEIQG 118
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+A G+ ++ L RRA V + GIS R+ + YG + + G D+ ++A NR
Sbjct: 119 YASRTGTAEHNLDLSKRRAENVRKELMMNGISGDRVTIVGYGDTVLATQGTDQVSHALNR 178
Query: 148 RAIVFLKGCRA 158
R + G +
Sbjct: 179 RVTATVIGHKG 189
>gi|119472858|ref|ZP_01614765.1| putative Component of sodium-driven polar flagellar motor
[Alteromonadales bacterium TW-7]
gi|119444690|gb|EAW25997.1| putative Component of sodium-driven polar flagellar motor
[Alteromonadales bacterium TW-7]
Length = 292
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNSSIALGLRRAYAVFN 111
+ ++S + + Q L + +L+ I+ + D G R +++ L +RA A+ +
Sbjct: 188 YQSNSSKLTKSSQQRLDKIAEYLKNDSTIESISIDSYTDSYGGRWNNLDLSRKRAKAIKD 247
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
Y V+ G+ +++K T +G++ + KNRR ++ +
Sbjct: 248 YMVSLGVDENKVKTTGFGEKRFVDTNDNILGRDKNRRLVIQI 289
>gi|83941258|ref|ZP_00953720.1| OmpA family protein [Sulfitobacter sp. EE-36]
gi|83847078|gb|EAP84953.1| OmpA family protein [Sulfitobacter sp. EE-36]
Length = 191
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 4/100 (4%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FF+T SY + P L+ + ++I GH D S ++ L L RA AV +
Sbjct: 93 FFNTDSYRVHPQGRARLAE--FFKTTGAVSYIISGHTDSRASDAYNMKLSLNRANAVASI 150
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
A+ A V YG+ MP+ AKNRR +
Sbjct: 151 --AQQSGARIADVRGYGERMPAASNGTAGGMAKNRRVEII 188
>gi|299773277|gb|ADJ38713.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 367
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 52/123 (42%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + + G+ D +G +++ L
Sbjct: 241 AFSSDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 300
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 301 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQVQ 360
Query: 155 GCR 157
G +
Sbjct: 361 GSK 363
>gi|227824065|ref|YP_002828038.1| putative outer membrane protein, OmpA/MotB domain protein
[Sinorhizobium fredii NGR234]
gi|227343067|gb|ACP27285.1| putative outer membrane protein, OmpA/MotB domain protein
[Sinorhizobium fredii NGR234]
Length = 189
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 53/136 (38%), Gaps = 1/136 (0%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDC 81
T +P + +E F +VG +F S ++ L +W
Sbjct: 51 TGQTNDPAPGFENVVAGSEEDFILNVGRRTYFTQDSATLDAVAKATLDKQATWLNSNQRW 110
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
++G AD+ GS + L +RA A Y V++G+ +R+ YG + D
Sbjct: 111 LVKLQGFADDSGSASKMATLSQQRADAAMAYLVSKGVDPNRLWAKGYGNDREVRDCTDRS 170
Query: 142 AYAKNRRAIVFLKGCR 157
+NRR + L+ R
Sbjct: 171 CKVQNRRVVSNLRTER 186
>gi|194288903|ref|YP_002004810.1| outer membrane protein, ompa domain [Cupriavidus taiwanensis LMG
19424]
gi|193222738|emb|CAQ68741.1| putative outer membrane protein, ompA domain [Cupriavidus
taiwanensis LMG 19424]
Length = 217
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 49/122 (40%), Gaps = 9/122 (7%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FD ++P L +L S L+ + +I GH D GS + L +R
Sbjct: 94 VTFAADTLFDFDKAVLKPEGKAKLDDLVSKLQGITLEVIIAVGHTDSFGSDKYNDRLSIR 153
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD--------EDAYAKNRRAIVFLKGC 156
RA +V Y V++G+ A+R+ GK V NRR V + G
Sbjct: 154 RAESVKAYLVSKGVEANRVYTEGKGKRQLKVDPKSCKGNRKSQIACQQPNRRVEVEVVGT 213
Query: 157 RA 158
R+
Sbjct: 214 RS 215
>gi|118496956|ref|YP_898006.1| OmpA family protein [Francisella tularensis subsp. novicida U112]
gi|194324185|ref|ZP_03057959.1| OmpA family protein [Francisella tularensis subsp. novicida FTE]
gi|118422862|gb|ABK89252.1| OmpA family protein [Francisella novicida U112]
gi|194321632|gb|EDX19116.1| OmpA family protein [Francisella tularensis subsp. novicida FTE]
Length = 417
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 65/179 (36%), Gaps = 26/179 (14%)
Query: 2 QYSTIFIILSAITMMSISGI-DNLDTKISSPDTVLNESSLQEQFSSS------------- 47
+ + ++ S +T +S D+ D E E S+
Sbjct: 3 KLLKLCLMTSLLTTLSACQTLDDKDKDSGPLTFPTLEPCTAELLQSNQSFICVKEQTGPD 62
Query: 48 -VGDSVFFDTSSYSIRPADIQVLSNLGSW----------LEKHDCDFLIEGHADELGSRN 96
+ ++ FD SY++ +VL L ++ ++ + + D+ +
Sbjct: 63 LIETNIKFDADSYTLNTQAKEVLDKLFAYLKLTDTTNFTIKGYAGKVESKILTDQKILTD 122
Query: 97 SSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+I L RA +V Y V +G S+ + + + G + P + A N+R + LK
Sbjct: 123 YNIRLSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDSTSSRAINQRVEITLK 181
>gi|113866814|ref|YP_725303.1| outer membrane protein or related peptidoglycan-associated
(lipo)protein [Ralstonia eutropha H16]
gi|113525590|emb|CAJ91935.1| outer membrane protein or related peptidoglycan-associated
(lipo)protein [Ralstonia eutropha H16]
Length = 217
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 49/122 (40%), Gaps = 9/122 (7%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FD ++P L +L S L+ + +I GH D GS + L +R
Sbjct: 94 VTFAADTLFDFDKAVLKPEGKAKLDDLVSKLQGITLEVIIAVGHTDSFGSDKYNDRLSIR 153
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD--------EDAYAKNRRAIVFLKGC 156
RA +V Y V++G+ A+R+ GK V NRR V + G
Sbjct: 154 RAESVKAYLVSKGVEANRVYTEGKGKRQLKVDPKSCKGNRKSQIACQQPNRRVEVEVVGT 213
Query: 157 RA 158
R+
Sbjct: 214 RS 215
>gi|83717671|ref|YP_439345.1| hypothetical protein BTH_II1148 [Burkholderia thailandensis E264]
gi|167577759|ref|ZP_02370633.1| hypothetical protein BthaT_06461 [Burkholderia thailandensis TXDOH]
gi|167615886|ref|ZP_02384521.1| hypothetical protein BthaB_06301 [Burkholderia thailandensis Bt4]
gi|257142466|ref|ZP_05590728.1| hypothetical protein BthaA_25103 [Burkholderia thailandensis E264]
gi|83651496|gb|ABC35560.1| ompA family protein [Burkholderia thailandensis E264]
Length = 215
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 10/116 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLS----NLGSWLEKHDCDFLIEGHADE------LGSR 95
+ SV F +S ++PA +L L ++L+ + ++ G AD+
Sbjct: 85 IGISGSVLFALNSDELQPAGRDLLKSLAGPLAAYLDANHEILMVSGFADDLQVRAGNRRF 144
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ L +RA V F+ G+ AS + ++G E P D+ AKNRR +
Sbjct: 145 ADNWELSAKRALTVTRAFIDEGVPASSVFAAAFGSEQPVSPNSDDAGRAKNRRVEI 200
>gi|89255751|ref|YP_513113.1| OmpA family protein [Francisella tularensis subsp. holarctica LVS]
gi|115314245|ref|YP_762968.1| OmpA family protein [Francisella tularensis subsp. holarctica
OSU18]
gi|167009203|ref|ZP_02274134.1| possible OmpA family protein [Francisella tularensis subsp.
holarctica FSC200]
gi|169656511|ref|YP_001427779.2| OmpA family protein [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|187931246|ref|YP_001891230.1| OmpA family protein [Francisella tularensis subsp. mediasiatica
FSC147]
gi|254367123|ref|ZP_04983156.1| outer membrane protein ompA [Francisella tularensis subsp.
holarctica 257]
gi|89143582|emb|CAJ78765.1| OmpA family protein [Francisella tularensis subsp. holarctica LVS]
gi|115129144|gb|ABI82331.1| possible OmpA family protein [Francisella tularensis subsp.
holarctica OSU18]
gi|134252946|gb|EBA52040.1| outer membrane protein ompA [Francisella tularensis subsp.
holarctica 257]
gi|164551579|gb|ABU60823.2| OmpA family protein [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|187712155|gb|ACD30452.1| OmpA family protein [Francisella tularensis subsp. mediasiatica
FSC147]
Length = 417
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 65/179 (36%), Gaps = 26/179 (14%)
Query: 2 QYSTIFIILSAITMMSISGI-DNLDTKISSPDTVLNESSLQEQFSSS------------- 47
+ + ++ S +T +S D+ D E E S+
Sbjct: 3 KLLKLCLMTSLLTTLSACQTLDDKDKDSGPLTFPTLEPCTAELLQSNQSFICVKEQTGPD 62
Query: 48 -VGDSVFFDTSSYSIRPADIQVLSNLGSW----------LEKHDCDFLIEGHADELGSRN 96
+ ++ FD SY++ +VL L ++ ++ + + D+ +
Sbjct: 63 LIETNIKFDADSYTLNTQAKEVLDKLFAYLKLTDTTNFTIKGYAGKVESKILTDQKILTD 122
Query: 97 SSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+I L RA +V Y V +G S+ + + + G + P + A N+R + LK
Sbjct: 123 YNIRLSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDSTSSRAINQRVEITLK 181
>gi|17545619|ref|NP_519021.1| signal peptide protein [Ralstonia solanacearum GMI1000]
gi|17427912|emb|CAD14602.1| putative outer membrane signal peptide protein [Ralstonia
solanacearum GMI1000]
gi|299066867|emb|CBJ38062.1| putative outer membrane protein, ompA domain [Ralstonia
solanacearum CMR15]
Length = 218
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 49/122 (40%), Gaps = 9/122 (7%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FD ++P L +L S L+ + +I GH D GS + L +R
Sbjct: 95 VTFAADALFDFDKAVLKPEGKSKLDDLVSKLKGITLEVVIAVGHTDSFGSDKYNDRLSVR 154
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD--------EDAYAKNRRAIVFLKGC 156
RA AV Y V++GI A+R+ GK V NRR V + G
Sbjct: 155 RAEAVKGYLVSKGIEANRVYTEGKGKRQLKVDPKSCKGARKAQIACQQPNRRVEVEVVGT 214
Query: 157 RA 158
R+
Sbjct: 215 RS 216
>gi|116621983|ref|YP_824139.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116225145|gb|ABJ83854.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076]
Length = 199
Score = 61.7 bits (148), Expect = 3e-08, Method: Composition-based stats.
Identities = 43/138 (31%), Positives = 67/138 (48%), Gaps = 6/138 (4%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-- 77
+ +S + +Q + + D+ +FD S+RP ++ L+ + L
Sbjct: 57 AAAPTASTPTSRYPDAPTRARIDQLLAKIEDA-YFDYDKASLRPDAMKALNADSTELRDI 115
Query: 78 ---KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
D IEGHADE GS ++ALG RRA Y V GI ++++ VTS+GKE P
Sbjct: 116 LKDYPDYKLRIEGHADERGSAEYNVALGDRRAATAKEYLVQVGIPSTQLDVTSFGKERPV 175
Query: 135 VYGHDEDAYAKNRRAIVF 152
H+E+ + KNRR +
Sbjct: 176 CQDHNENCWQKNRRIHIV 193
>gi|313206839|ref|YP_004046016.1| ompa/motb domain protein [Riemerella anatipestifer DSM 15868]
gi|312446155|gb|ADQ82510.1| OmpA/MotB domain protein [Riemerella anatipestifer DSM 15868]
gi|315023913|gb|EFT36915.1| putative flagellar motor protein MotB [Riemerella anatipestifer
RA-YM]
Length = 278
Score = 61.7 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 49/131 (37%), Gaps = 7/131 (5%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHA 89
D + L+ S+ D + + + Y+I PA +VL + + +D LIEG+
Sbjct: 131 ADQDVQVKVLKGVVMISLSDKMLYRSGDYNILPAAQEVLGKVAKVINDYDKYSVLIEGNT 190
Query: 90 DELGSR-----NSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAY 143
D + + L RA +V + + SR+ + P
Sbjct: 191 DNVPLNSASLPKDNWDLSALRATSVAKVLQNQFGVDPSRITAGGRSEYNPKATNMSVSGR 250
Query: 144 AKNRRAIVFLK 154
A+NRR + +
Sbjct: 251 AENRRTEIIIM 261
>gi|217969212|ref|YP_002354446.1| peptidoglycan-associated lipoprotein [Thauera sp. MZ1T]
gi|217506539|gb|ACK53550.1| peptidoglycan-associated lipoprotein [Thauera sp. MZ1T]
Length = 170
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 66/136 (48%), Gaps = 5/136 (3%)
Query: 18 ISGIDNLDTKISSPDTVLNE----SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+ + + T +++ + ++L + + SVFFD S+ I+ ++
Sbjct: 26 AASVQDRGTGVATVTAGSAKGSGIAALTDPNNILSKRSVFFDFDSFVIKQEARPLIEAHA 85
Query: 74 SW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
+ ++ + L++G+ DE GSR ++ALG +RA V + G S+++ S G+E
Sbjct: 86 RFLVQNPQMNMLVQGNTDERGSREYNLALGQKRADVVKQALMLLGAKESQIESVSLGEEK 145
Query: 133 PSVYGHDEDAYAKNRR 148
P E+ YA+NRR
Sbjct: 146 PRCEDRTENCYAENRR 161
>gi|317151983|ref|YP_004120031.1| OmpA/MotB domain-containing protein [Desulfovibrio aespoeensis
Aspo-2]
gi|316942234|gb|ADU61285.1| OmpA/MotB domain protein [Desulfovibrio aespoeensis Aspo-2]
Length = 241
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 55/134 (41%), Gaps = 1/134 (0%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL 84
D + D L + + + D + F+ + + Q+L L L
Sbjct: 102 DLSKAELDKNLEILAKPDGVALVFTDKLLFEPGASRLSLRGEQLLEALTPVLLFTAAPVN 161
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD-EDAY 143
+ GH D + AL RA AV ++ V G+ R +++YG ++P++ D A
Sbjct: 162 VAGHTDASDTGADPYALSGDRALAVLSFLVDAGVPDRRFSLSAYGSDVPALDERDRPVAS 221
Query: 144 AKNRRAIVFLKGCR 157
+ NRR + LK R
Sbjct: 222 SMNRRVEILLKTAR 235
>gi|325913887|ref|ZP_08176246.1| flagellar motor protein [Xanthomonas vesicatoria ATCC 35937]
gi|325539962|gb|EGD11599.1| flagellar motor protein [Xanthomonas vesicatoria ATCC 35937]
Length = 221
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 48/131 (36%), Gaps = 10/131 (7%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS----NLGSWLEKHDCDFLIE 86
+ + +V F +S ++P +VL L +L + ++
Sbjct: 70 AAPLAAGRVTLVDGRIGIRGNVLFAFNSDELQPEGREVLKSLAAPLAQYLSAREEILMVS 129
Query: 87 GHADELG------SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
G D+ + L +RA V +A G+ A+ + ++G + P DE
Sbjct: 130 GFTDDRPVLGGNRRYADNWELSAQRALTVTRALIADGVPAASVFAAAFGSQQPVDSNADE 189
Query: 141 DAYAKNRRAIV 151
AKNRR +
Sbjct: 190 ARRAKNRRVEI 200
>gi|299773285|gb|ADJ38717.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 367
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 52/123 (42%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + + G+ D +G +++ L
Sbjct: 241 AFSSDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 300
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 301 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKAIITCLAPDRRVEIQVQ 360
Query: 155 GCR 157
G +
Sbjct: 361 GSK 363
>gi|86131405|ref|ZP_01050003.1| OmpA family protein [Dokdonia donghaensis MED134]
gi|85817850|gb|EAQ39018.1| OmpA family protein [Dokdonia donghaensis MED134]
Length = 568
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 6/110 (5%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYA 108
+++ +D Y IRP L+ L +++ + + H D S + + L RA A
Sbjct: 456 NNILYDLDKYDIRPDARPELNRLAQFMKDNPGIRVEVSSHTDSRASDSYNQTLSQNRANA 515
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHD-----EDAYAKNRRAIVFL 153
+Y V++G+S S++ YG+ D E + NRR + +
Sbjct: 516 AVDYVVSQGVSRSKITGKGYGESRLLNECADGVSCSETKHQINRRTEMKV 565
>gi|146278244|ref|YP_001168403.1| hypothetical protein Rsph17025_2208 [Rhodobacter sphaeroides ATCC
17025]
gi|145556485|gb|ABP71098.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17025]
Length = 525
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 45/120 (37%), Gaps = 14/120 (11%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLG--------SWLEKHDCDFLIEGHADE-----LGS 94
V F+ S + +S + E D ++GH D+ G+
Sbjct: 403 FSSEVLFEPGSAQLASEGRTQISGVTRTLSEIREQIPEGIDWIIRVDGHTDDVPLSGFGA 462
Query: 95 RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA +V Y G SR+ T +G+ P V G +A A+NRR + L
Sbjct: 463 FRDNWELSSARALSVVRYMQQTLGFPPSRLAATGFGEYRPVVEGSSPEARAQNRRIELKL 522
>gi|325335721|gb|ADZ11995.1| Flagellar motor protein [Riemerella anatipestifer RA-GD]
Length = 281
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 49/131 (37%), Gaps = 7/131 (5%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHA 89
D + L+ S+ D + + + Y+I PA +VL + + +D LIEG+
Sbjct: 134 ADQDVQVKVLKGVVMISLSDKMLYRSGDYNILPAAQEVLGKVAKVINDYDKYSVLIEGNT 193
Query: 90 DELGSR-----NSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAY 143
D + + L RA +V + + SR+ + P
Sbjct: 194 DNVPLNSASLPKDNWDLSALRATSVAKVLQNQFGVDPSRITAGGRSEYNPKATNMSVSGR 253
Query: 144 AKNRRAIVFLK 154
A+NRR + +
Sbjct: 254 AENRRTEIIIM 264
>gi|315609087|ref|ZP_07884056.1| OmpA family protein [Prevotella buccae ATCC 33574]
gi|315249157|gb|EFU29177.1| OmpA family protein [Prevotella buccae ATCC 33574]
Length = 755
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 46/137 (33%), Gaps = 28/137 (20%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGL 103
+ + D++F++ ++ P + L L E + + H D GS + L
Sbjct: 582 APVLIDNIFYEFDKANLTPESTKALDELVKLLNENPNVTIELSAHCDYKGSMEYNKRLSQ 641
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMP---------------------------SVY 136
RRA AV Y V GI+ R+ YGKE P
Sbjct: 642 RRAEAVVAYLVGHGIARDRLTPVGYGKERPKTIRRKVAAKYPWLKEGDVLTEDFIHHLDA 701
Query: 137 GHDEDAYAKNRRAIVFL 153
G E NRR +
Sbjct: 702 GKQEVCNQLNRRTEFTV 718
>gi|299773283|gb|ADJ38716.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 367
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 52/123 (42%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + + G+ D +G +++ L
Sbjct: 241 AFSSDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 300
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 301 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQVQ 360
Query: 155 GCR 157
G +
Sbjct: 361 GSK 363
>gi|146306332|ref|YP_001186797.1| flagellar motor protein MotB [Pseudomonas mendocina ymp]
gi|145574533|gb|ABP84065.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp]
Length = 296
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 20/120 (16%), Positives = 41/120 (34%), Gaps = 5/120 (4%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSS 98
+ + V + F + S + PA +L + L + +EGH D++ +
Sbjct: 147 EERRRIILRVEERGSFASGSAELTPAFEDMLLGMSELLVEIPGTLTVEGHTDDVPISTAR 206
Query: 99 IALGLRRAYAVFNY-----FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ A + + + R++V + P V A NRR + +
Sbjct: 207 FRSNWDLSAARASAVANALLLNPALEPQRLEVKGFADTRPRVANDSAQQRALNRRVEIII 266
>gi|28898249|ref|NP_797854.1| hypothetical protein VP1475 [Vibrio parahaemolyticus RIMD 2210633]
gi|308125351|ref|ZP_05774746.2| outer membrane protein [Vibrio parahaemolyticus K5030]
gi|28806466|dbj|BAC59738.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
gi|308113621|gb|EFO51161.1| outer membrane protein [Vibrio parahaemolyticus K5030]
Length = 300
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 52/141 (36%), Gaps = 1/141 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
T D + N+ ++ + + F S I P + L+ L H
Sbjct: 134 TQTTCTPPDDIDALRNDLNIVADIYALLNVDNQFAIDSAEINPKYMGHLAEAAYILRDHP 193
Query: 81 C-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
++ GHAD G+ + L RA V Y G+++ R++ S G +P G
Sbjct: 194 ALSLVVTGHADVTGTPEHNKKLAQERAEQVKRYLSVFGVTSDRVQTKSVGDTLPLYEGQT 253
Query: 140 EDAYAKNRRAIVFLKGCRANT 160
NRR + + +++
Sbjct: 254 PAVRLTNRRVSIEVLSANSDS 274
>gi|37498966|gb|AAQ86765.2| hemagglutinin antigen [Avibacterium paragallinarum]
gi|48249488|gb|AAT40990.1| hemagglutinin antigen [Avibacterium paragallinarum]
Length = 345
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 10/120 (8%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRR 105
++ V F ++RP VL + + + + G+ D +GS +++ L RR
Sbjct: 225 ALNSDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDVAGYTDRIGSEAANLKLSQRR 284
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLKGC 156
A V NY V++G++ + T YG+ P A +RR + +KG
Sbjct: 285 ADTVANYLVSKGVAQEVISSTGYGEANPVTGAKCDAVKGRKALIACLADDRRVEISVKGN 344
>gi|223040101|ref|ZP_03610381.1| OmpA/MotB [Campylobacter rectus RM3267]
gi|222878578|gb|EEF13679.1| OmpA/MotB [Campylobacter rectus RM3267]
Length = 256
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 46/130 (35%), Gaps = 7/130 (5%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV-LSNLGSWLEKHDCDFL--I 85
+S + + F + ++ FD S ++ D + L + + K D + +
Sbjct: 105 ASGSPEVTFEESESGFVIRLPANLLFDKDSARLQNDDALLFLKRIAMVIAKLPPDVVANV 164
Query: 86 EGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
GH D + L RA +V + G+ ++ ++ + P E
Sbjct: 165 IGHTDSEQPGSAEFKDNWQLSSARAISVVTELIKDGVDPKKLTASAKAEFEPFATNFTEQ 224
Query: 142 AYAKNRRAIV 151
KNRR +
Sbjct: 225 GREKNRRVEI 234
>gi|86133789|ref|ZP_01052371.1| OmpA family protein [Polaribacter sp. MED152]
gi|85820652|gb|EAQ41799.1| OmpA family protein [Polaribacter sp. MED152]
Length = 279
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 6/116 (5%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELG----SRNSS 98
SV D + F+T SY ++ + + +++ + E D +IEGH D + +
Sbjct: 149 VMISVSDKLLFNTGSYRVKESALSLITKIADIAESEPSIDIMIEGHTDSQSISNATVQDN 208
Query: 99 IALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L ++RA ++ + I SR+ + G +P + + AKNRR + +
Sbjct: 209 WDLSVKRATSIVRLLQNKFKIDGSRLIASGRGDTVPLLPNTSSENRAKNRRTRIVI 264
>gi|103487471|ref|YP_617032.1| OmpA/MotB [Sphingopyxis alaskensis RB2256]
gi|98977548|gb|ABF53699.1| OmpA/MotB [Sphingopyxis alaskensis RB2256]
Length = 373
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNL--GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
V+FD +I P L N ++ GHAD GS ++ L RR
Sbjct: 261 PYIVYFDWDQSNITPEAASTLDNAISAYNRGCTGTQIMLAGHADRSGSARYNVGLSERRN 320
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
AV +Y ARGIS + ++G+ P+V D +NRR +
Sbjct: 321 DAVRSYLTARGISDGSISAQAFGETRPAVATADGVRNDQNRRVEIT 366
>gi|254361457|ref|ZP_04977597.1| outer membrane protein OmpA [Mannheimia haemolytica PHL213]
gi|153092967|gb|EDN73993.1| outer membrane protein OmpA [Mannheimia haemolytica PHL213]
Length = 230
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 53/143 (37%), Gaps = 12/143 (8%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK---HDCDFLIE 86
E+ + + V FD S++PA L + + + +
Sbjct: 87 GQGAAPVEAPEVVTKNFAFSSDVLFDFGKSSLKPAAATSLDAAHAEISNLGLANLAIQVN 146
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV--YGHDEDAY- 143
G+ D +G S++ L RRA V NY V++G + + + YG+ P
Sbjct: 147 GYTDRIGKEASNLKLSQRRAETVANYIVSKGTNPANVTAVGYGEANPVTGHTCDAVKGRK 206
Query: 144 ------AKNRRAIVFLKGCRANT 160
A +RR + ++G + T
Sbjct: 207 ALIACLAPDRRVEIQVQGSKEVT 229
>gi|157960193|ref|YP_001500227.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC
700345]
gi|157845193|gb|ABV85692.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345]
Length = 201
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/182 (21%), Positives = 67/182 (36%), Gaps = 27/182 (14%)
Query: 1 MQYSTIFI---ILSAITMMSISGIDNLDTKISSPDT-------VLNESSLQEQFSSSVGD 50
M+ + + IL +M I+ +D +++ V E + +++ +
Sbjct: 1 MKIILVLLSLAILGGCSMRDIATMDEPTVQVNDLSDIDHDGVIVARERCNETALGATIDN 60
Query: 51 ---------------SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGS 94
+ F SY I P + + S+++K +IEGH + GS
Sbjct: 61 YGCGKIKPINERQELKILFANDSYYIDPQYYPQVEVIASFMQKFPNTQAVIEGHCSKTGS 120
Query: 95 RNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA AV + R I + R+ Y + P H A+ NRR I L
Sbjct: 121 HQHNQVLSQNRANAVSSLLAERFGIDSGRLSAVGYSFDRPIDPTHTASAHKINRRVIAEL 180
Query: 154 KG 155
G
Sbjct: 181 TG 182
>gi|57339664|gb|AAW49819.1| hypothetical protein FTT0831 [synthetic construct]
Length = 452
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/179 (18%), Positives = 65/179 (36%), Gaps = 26/179 (14%)
Query: 2 QYSTIFIILSAITMMSISGI-DNLDTKISSPDTVLNESSLQEQFSSS------------- 47
+ + ++ S IT +S D+ D E E S+
Sbjct: 29 KLLKLCLMTSLITTLSACQTLDDKDKDSGPLTFPTLEPCTAELLQSNQSFICVKEQTGPD 88
Query: 48 -VGDSVFFDTSSYSIRPADIQVLSNLGSW----------LEKHDCDFLIEGHADELGSRN 96
+ ++ FD SY++ +VL L ++ ++ + + D+ +
Sbjct: 89 LIETNIKFDADSYTLNTQAKEVLDKLFAYLKLTDTTNFTIKGYAGKVESKILTDQKILTD 148
Query: 97 SSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+I L RA +V Y V +G S+ + + + G + P + A N+R + LK
Sbjct: 149 YNIRLSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDSTSSRAINQRVEITLK 207
>gi|71907527|ref|YP_285114.1| OmpA/MotB [Dechloromonas aromatica RCB]
gi|71847148|gb|AAZ46644.1| OmpA/MotB [Dechloromonas aromatica RCB]
Length = 198
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 5/144 (3%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD----SVFFDTSSYSIRPADIQVLS 70
M SG + + + D S+ E + ++ F++ + ++ A + +
Sbjct: 54 MTQTSGEAKPPSAVKTADPAYIASTFAEVLAIEPPPPQVFTLMFESGTTNLTTASLDQIP 113
Query: 71 N-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
N + + ++ I GH D GS + AL L RA V+N +GI A M VTS+G
Sbjct: 114 NIVAASQKRPAVSVRISGHTDATGSDKVNDALSLERAMQVWNLLQQKGIPARLMSVTSHG 173
Query: 130 KEMPSVYGHDEDAYAKNRRAIVFL 153
K P++ D A +NRR +V +
Sbjct: 174 KGNPAIPTPDGVAEPRNRRVVVIV 197
>gi|327189144|gb|EGE56328.1| hypothetical protein RHECNPAF_7150015 [Rhizobium etli CNPAF512]
Length = 429
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 48/130 (36%), Gaps = 4/130 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ ++ S +Q + S FD++S ++ + +L +G L L+ GH D
Sbjct: 300 EGLVTVSEDPQQIVVIIRASGMFDSASPEVKKMFLPLLLRIGRSLNGESGSVLLTGHTDA 359
Query: 92 LGSRNSSIALGLRRAYAVF----NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+ ++ + + A + R++ G P H + A+NR
Sbjct: 360 IPVQSLAFPSNDSLSLARASAAAEIIKSMMNDPGRVREEGRGSGEPVASNHTPEGRARNR 419
Query: 148 RAIVFLKGCR 157
R + + +
Sbjct: 420 RIQIIITKTQ 429
>gi|325920257|ref|ZP_08182205.1| flagellar motor protein [Xanthomonas gardneri ATCC 19865]
gi|325549250|gb|EGD20156.1| flagellar motor protein [Xanthomonas gardneri ATCC 19865]
Length = 224
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 50/131 (38%), Gaps = 10/131 (7%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD----FLIE 86
+ + +V F +S ++P +VL L + L+++ ++
Sbjct: 70 AAPLAAGRVTLVDGRIGIRGNVLFAFNSDQLQPEGREVLKTLAAPLKEYLSSREEILMVS 129
Query: 87 GHADELG------SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
G D+ + L +RA V +A G+ AS + ++G + P DE
Sbjct: 130 GFTDDRPVLGGNRRYADNWELSAQRALTVTRALIAEGVPASSVFAAAFGSQQPVDSNADE 189
Query: 141 DAYAKNRRAIV 151
AKNRR +
Sbjct: 190 TRRAKNRRVEI 200
>gi|312270773|gb|ADQ55787.1| OmpA [Haemophilus parasuis]
gi|312270775|gb|ADQ55788.1| OmpA [Haemophilus parasuis]
Length = 371
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 52/123 (42%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + + G+ D +G +++ L
Sbjct: 245 AFSSDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 304
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 305 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQVQ 364
Query: 155 GCR 157
G +
Sbjct: 365 GSK 367
>gi|91794083|ref|YP_563734.1| OmpA/MotB [Shewanella denitrificans OS217]
gi|91716085|gb|ABE56011.1| OmpA/MotB [Shewanella denitrificans OS217]
Length = 373
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+ FD S I+P + L S + +IEGHA +G+ + ++ L RRA AV
Sbjct: 260 ILFDNDSSVIKPGAYSDVEILVSHLEKYPQHTVVIEGHASNVGTPDYNLLLSERRANAVA 319
Query: 111 NYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
++ I+ SR+K YG P + G+ +A+ NRR + G
Sbjct: 320 ALVTSKYKINGSRIKSVGYGLTKPQMAGNSAEAHRLNRRIEAIVTGT 366
>gi|86134567|ref|ZP_01053149.1| OmpA family protein [Polaribacter sp. MED152]
gi|85821430|gb|EAQ42577.1| OmpA family protein [Polaribacter sp. MED152]
Length = 283
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 43/115 (37%), Gaps = 6/115 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGS----RNSSIA 100
S+ D + F + SY++ VL + ++ + +IEGH D +
Sbjct: 154 ISISDKLLFKSGSYNVTENAYTVLDKIAKVIKDQPKMEVMIEGHTDTTPIKRDLIQDNWD 213
Query: 101 LGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L RA ++ + + R+ + +P + AKNRR + +
Sbjct: 214 LSALRATSITRILQYKFGVKPERLIAAGRSQYIPLAPNDTAENKAKNRRTKIIIM 268
>gi|332877818|ref|ZP_08445556.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332684113|gb|EGJ56972.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 680
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 48/137 (35%), Gaps = 28/137 (20%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGL 103
+ + D+VF+ S + + L +L + +E + + H D G +I L
Sbjct: 514 APVLVDNVFYAFDSAELTDSSTLALDSLVTLMEDNPNITIELSSHCDYRGRDEYNIRLSQ 573
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSV-------------YGHD----------- 139
RRA +V Y +A G++ R+ YG+ P V
Sbjct: 574 RRAESVVKYLIAHGVATDRLTPIGYGETRPKVIRKRLTERYPFLHENDTLTEAFIKKLPE 633
Query: 140 ---EDAYAKNRRAIVFL 153
E A NRR +
Sbjct: 634 EQQEICNALNRRTEFRV 650
>gi|330998288|ref|ZP_08322113.1| OmpA family protein [Paraprevotella xylaniphila YIT 11841]
gi|329568677|gb|EGG50478.1| OmpA family protein [Paraprevotella xylaniphila YIT 11841]
Length = 673
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 48/137 (35%), Gaps = 28/137 (20%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGL 103
+ + D+VF+ S + + L +L + +E + + H D G +I L
Sbjct: 514 APVLVDNVFYAFDSAELTDSSTLALDSLVTLMEDNPNITIELSSHCDYRGRDEYNIRLSQ 573
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSV-------------YGHD----------- 139
RRA +V Y +A G++ R+ YG+ P V
Sbjct: 574 RRAESVVKYLIAHGVATDRLTPIGYGETRPKVIRKRLTERYPFLHENDTLTEAFIKKLPE 633
Query: 140 ---EDAYAKNRRAIVFL 153
E A NRR +
Sbjct: 634 EQQEICNALNRRTEFRV 650
>gi|320577120|gb|ADW54069.1| outer membrane protein A [Sodalis glossinidius]
Length = 290
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 50/121 (41%), Gaps = 5/121 (4%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDCDFLIE 86
D V + + + ++ V F+ +++P Q L L S ++ D ++
Sbjct: 163 GQDEVAPPAPVVQTKHFTLKSDVLFNFDKATLKPEGQQALDQLYSQLSSMDPKDGSVVVL 222
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYA 144
G+ D +G+ + L RA +V +Y V++GI + ++ GK P + A
Sbjct: 223 GYTDRIGTEQYNQKLSQERAQSVVSYLVSKGIPSDKISARGMGKSNPVTGNTCNSVKGRA 282
Query: 145 K 145
Sbjct: 283 A 283
>gi|163753146|ref|ZP_02160270.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Kordia algicida OT-1]
gi|161326878|gb|EDP98203.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Kordia algicida OT-1]
Length = 543
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 52/138 (37%), Gaps = 4/138 (2%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
G D T E +++ ++++FD + + ++ L+ + E
Sbjct: 404 GDDFKHTVTIKLPQAKAEIVKEDEKLMIKIENIYFDYNKWMLKDESTLSLNKIIDVLNEN 463
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ I H D G + L +RA + Y + GI ASR+ YG+ P
Sbjct: 464 PEMKIEINAHTDNRGRATYNSKLSNKRAASARAYLLKNGIDASRVISNGYGESQPIEDCG 523
Query: 139 DEDAYAK---NRRAIVFL 153
+ + A+ NRR +
Sbjct: 524 TKCSEAQHETNRRIEFLI 541
>gi|53716748|ref|YP_105773.1| hypothetical protein BMAA1115 [Burkholderia mallei ATCC 23344]
gi|53722286|ref|YP_111271.1| hypothetical protein BPSS1264 [Burkholderia pseudomallei K96243]
gi|67640638|ref|ZP_00439437.1| OmpA family protein [Burkholderia mallei GB8 horse 4]
gi|76817712|ref|YP_335426.1| hypothetical protein BURPS1710b_A0267 [Burkholderia pseudomallei
1710b]
gi|121597371|ref|YP_989733.1| hypothetical protein BMASAVP1_0116 [Burkholderia mallei SAVP1]
gi|124383227|ref|YP_001024134.1| hypothetical protein BMA10229_0310 [Burkholderia mallei NCTC 10229]
gi|126444000|ref|YP_001062783.1| hypothetical protein BURPS668_A1788 [Burkholderia pseudomallei 668]
gi|126447861|ref|YP_001078471.1| hypothetical protein BMA10247_A1285 [Burkholderia mallei NCTC
10247]
gi|126458362|ref|YP_001075736.1| hypothetical protein BURPS1106A_A1702 [Burkholderia pseudomallei
1106a]
gi|134283770|ref|ZP_01770468.1| ompA family protein [Burkholderia pseudomallei 305]
gi|167004053|ref|ZP_02269827.1| OmpA family protein [Burkholderia mallei PRL-20]
gi|167723789|ref|ZP_02407025.1| hypothetical protein BpseD_32535 [Burkholderia pseudomallei DM98]
gi|167742753|ref|ZP_02415527.1| hypothetical protein Bpse14_32062 [Burkholderia pseudomallei 14]
gi|167819935|ref|ZP_02451615.1| hypothetical protein Bpse9_32712 [Burkholderia pseudomallei 91]
gi|167828320|ref|ZP_02459791.1| hypothetical protein Bpseu9_31854 [Burkholderia pseudomallei 9]
gi|167849768|ref|ZP_02475276.1| hypothetical protein BpseB_31255 [Burkholderia pseudomallei B7210]
gi|167898369|ref|ZP_02485770.1| hypothetical protein Bpse7_31831 [Burkholderia pseudomallei 7894]
gi|167906730|ref|ZP_02493935.1| hypothetical protein BpseN_31160 [Burkholderia pseudomallei NCTC
13177]
gi|167915084|ref|ZP_02502175.1| hypothetical protein Bpse112_31676 [Burkholderia pseudomallei 112]
gi|167922922|ref|ZP_02510013.1| hypothetical protein BpseBC_30487 [Burkholderia pseudomallei
BCC215]
gi|217418998|ref|ZP_03450505.1| OmpA family protein [Burkholderia pseudomallei 576]
gi|226198078|ref|ZP_03793650.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9]
gi|237510063|ref|ZP_04522778.1| OmpA/MotB domain protein [Burkholderia pseudomallei MSHR346]
gi|242311463|ref|ZP_04810480.1| OmpA family protein [Burkholderia pseudomallei 1106b]
gi|254174540|ref|ZP_04881202.1| ompA family protein [Burkholderia mallei ATCC 10399]
gi|254183624|ref|ZP_04890216.1| ompA family protein [Burkholderia pseudomallei 1655]
gi|254191105|ref|ZP_04897610.1| OmpA family protein [Burkholderia pseudomallei Pasteur 52237]
gi|254193505|ref|ZP_04899939.1| ompA family protein [Burkholderia pseudomallei S13]
gi|254200586|ref|ZP_04906951.1| OmpA family protein [Burkholderia mallei FMH]
gi|254262357|ref|ZP_04953222.1| ompA family protein [Burkholderia pseudomallei 1710a]
gi|254301765|ref|ZP_04969208.1| ompA family protein [Burkholderia pseudomallei 406e]
gi|254356764|ref|ZP_04973039.1| OmpA family protein [Burkholderia mallei 2002721280]
gi|52212700|emb|CAH38731.1| OmpA family membrane protein [Burkholderia pseudomallei K96243]
gi|52422718|gb|AAU46288.1| ompA family protein [Burkholderia mallei ATCC 23344]
gi|76582185|gb|ABA51659.1| ompA family protein [Burkholderia pseudomallei 1710b]
gi|121225169|gb|ABM48700.1| ompA family protein [Burkholderia mallei SAVP1]
gi|124291247|gb|ABN00517.1| ompA family protein [Burkholderia mallei NCTC 10229]
gi|126223491|gb|ABN86996.1| OmpA family protein [Burkholderia pseudomallei 668]
gi|126232130|gb|ABN95543.1| OmpA family protein [Burkholderia pseudomallei 1106a]
gi|126240715|gb|ABO03827.1| ompA family protein [Burkholderia mallei NCTC 10247]
gi|134244952|gb|EBA45048.1| ompA family protein [Burkholderia pseudomallei 305]
gi|147748198|gb|EDK55273.1| OmpA family protein [Burkholderia mallei FMH]
gi|148025791|gb|EDK83914.1| OmpA family protein [Burkholderia mallei 2002721280]
gi|157811639|gb|EDO88809.1| ompA family protein [Burkholderia pseudomallei 406e]
gi|157938778|gb|EDO94448.1| OmpA family protein [Burkholderia pseudomallei Pasteur 52237]
gi|160695586|gb|EDP85556.1| ompA family protein [Burkholderia mallei ATCC 10399]
gi|169650258|gb|EDS82951.1| ompA family protein [Burkholderia pseudomallei S13]
gi|184214157|gb|EDU11200.1| ompA family protein [Burkholderia pseudomallei 1655]
gi|217398302|gb|EEC38317.1| OmpA family protein [Burkholderia pseudomallei 576]
gi|225929954|gb|EEH25969.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9]
gi|235002268|gb|EEP51692.1| OmpA/MotB domain protein [Burkholderia pseudomallei MSHR346]
gi|238521399|gb|EEP84851.1| OmpA family protein [Burkholderia mallei GB8 horse 4]
gi|242134702|gb|EES21105.1| OmpA family protein [Burkholderia pseudomallei 1106b]
gi|243060517|gb|EES42703.1| OmpA family protein [Burkholderia mallei PRL-20]
gi|254213359|gb|EET02744.1| ompA family protein [Burkholderia pseudomallei 1710a]
Length = 215
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 10/116 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLS----NLGSWLEKHDCDFLIEGHADE------LGSR 95
+ SV F +S ++PA +L L ++L + ++ G AD+
Sbjct: 85 IGISGSVLFALNSDELQPAGRDLLKSLAGPLAAYLNANHEILMVSGFADDLQVRAGNRRF 144
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ L +RA V F+ G+ AS + ++G E P ++ AKNRR +
Sbjct: 145 ADNWELSAKRALTVTRAFIDEGVPASSVFAAAFGSEQPVSPNSNDAGRAKNRRVEI 200
>gi|257871284|ref|ZP_05650937.1| flagellar motor protein MotB [Enterococcus gallinarum EG2]
gi|257805448|gb|EEV34270.1| flagellar motor protein MotB [Enterococcus gallinarum EG2]
Length = 254
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 47/139 (33%), Gaps = 7/139 (5%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDC 81
+ + S + ++ S+ F + S I Q L L +
Sbjct: 110 SQELASSGLKDQTEVRLESDGLHITLASSILFTSGSAEITATTRQSLDLLSDSLKKLKTN 169
Query: 82 DFLIEGHADELGS-----RNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSV 135
+I GH D + S+ L RA V YF+++G + ++ P
Sbjct: 170 KIVIAGHTDNVPEKGNGRYQSNWDLSSARAINVMEYFISKGAVLEKNAAIQAFADTEPKA 229
Query: 136 YGHDEDAYAKNRRAIVFLK 154
+ ++NRR + ++
Sbjct: 230 DNNTPQGRSENRRVEMIIQ 248
>gi|190894192|ref|YP_001984486.1| hypothetical protein RHECIAT_PB0000226 [Rhizobium etli CIAT 652]
gi|190699853|gb|ACE93936.1| hypothetical protein RHECIAT_PB0000226 [Rhizobium etli CIAT 652]
Length = 429
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 48/130 (36%), Gaps = 4/130 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ ++ S +Q + S FD++S ++ + +L +G L L+ GH D
Sbjct: 300 EGLVTVSEDPQQIVVIIRASGMFDSASPEVKKMFLPLLLRIGRSLNGESGSVLLTGHTDA 359
Query: 92 LGSRNSSIALGLRRAYAVF----NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+ ++ + + A + R++ G P H + A+NR
Sbjct: 360 IPVQSLAFPSNDSLSLARASAAAEIIKSMMDDPGRVREEGRGSGEPVASNHTPEGRARNR 419
Query: 148 RAIVFLKGCR 157
R + + +
Sbjct: 420 RIQIIITKTQ 429
>gi|117925108|ref|YP_865725.1| OmpA/MotB domain-containing protein [Magnetococcus sp. MC-1]
gi|117608864|gb|ABK44319.1| OmpA/MotB domain protein [Magnetococcus sp. MC-1]
Length = 322
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 54/142 (38%), Gaps = 8/142 (5%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVG-------DSVFFDTSSYSIRPADIQVLS 70
+G + ++ L VG +S+ F+T S+ + + VL+
Sbjct: 177 ATGCEISKDGDMDGVLNEQDACLDTPKGLPVGKNGCWSVNSIHFNTGSWELDAKALSVLN 236
Query: 71 N-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
+ + + ++GH D + L L+RA +V Y +G++ R ++G
Sbjct: 237 AAVATMKQHAAIRVEVQGHTDSRADDTFNKKLSLKRAESVIWYMTKQGLARDRFVAAAFG 296
Query: 130 KEMPSVYGHDEDAYAKNRRAIV 151
++ + D NRR +
Sbjct: 297 EQKLLNSEKNSDERLVNRRVEL 318
>gi|257482066|ref|ZP_05636107.1| ompA family protein [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 65
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
++ L +RA +V Y ++G+ S + V G + P D + A+NRR V LK
Sbjct: 1 HNMDLSQQRAQSVATYLTSQGVDQSHLSVRGAGPDQPIASNADVNGRAQNRRVEVNLK 58
>gi|209168561|gb|ACI42276.1| putative outer membrane protein [Vibrio alginolyticus]
Length = 213
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 55/138 (39%), Gaps = 1/138 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
D + + S + V F S I P Q + L +L+++
Sbjct: 61 DLCPGTPLGAEIDNDGCGSYVDSSQEMQIRVLFANDSDVINPIFTQQIRELSDFLKEYPN 120
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
I+G+A G+ ++ L RRA V + GIS R+ + YG + + G D+
Sbjct: 121 TSIEIQGYASRTGTAEHNLDLSKRRAENVRKELMTNGISGDRVTIVGYGDTVLATQGTDQ 180
Query: 141 DAYAKNRRAIVFLKGCRA 158
++A NRR + G +
Sbjct: 181 VSHALNRRVTATVIGHKG 198
>gi|257875985|ref|ZP_05655638.1| flagellar motor protein MotB [Enterococcus casseliflavus EC20]
gi|257810151|gb|EEV38971.1| flagellar motor protein MotB [Enterococcus casseliflavus EC20]
Length = 254
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 47/139 (33%), Gaps = 7/139 (5%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDC 81
+ + S + ++ S+ F + S I Q L L +
Sbjct: 110 SQELAASGLKEQTEVRLESDGLHITLASSILFASGSAEITDTTRQSLDLLSDSLKKLKAN 169
Query: 82 DFLIEGHADELGS-----RNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSV 135
+I GH D + S+ L RA V YF+++G + ++ P
Sbjct: 170 KIVIAGHTDNVPEKGNGRYQSNWDLSSARAITVMEYFISKGAVLEKNAAIQAFADTEPKA 229
Query: 136 YGHDEDAYAKNRRAIVFLK 154
+ ++NRR + ++
Sbjct: 230 DNNTPQGRSENRRVEMIIQ 248
>gi|162449977|ref|YP_001612344.1| outer membrane protein [Sorangium cellulosum 'So ce 56']
gi|161160559|emb|CAN91864.1| outer membrane protein [Sorangium cellulosum 'So ce 56']
Length = 274
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 20/133 (15%), Positives = 41/133 (30%), Gaps = 14/133 (10%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD----CDFLIEGHAD 90
L+ + + + V FD+ +++ ++L + + F + GH D
Sbjct: 127 LSVTVRNNRMVIQLPGDVLFDSGRETLKKEGQEILLKVAEVIRNDSGLSARSFQVAGHTD 186
Query: 91 ELG----SRNSSIALGLRRAYAVFNYFVARGIS------ASRMKVTSYGKEMPSVYGHDE 140
+ L + RA V + + R + YG P
Sbjct: 187 NAPLAGGRFKDNWGLSVMRAREVLAFLLQPEDKGGGGLKPERWSASGYGDTDPVKPNDTP 246
Query: 141 DAYAKNRRAIVFL 153
+ NRR + +
Sbjct: 247 ENKQANRRCELVV 259
>gi|91217237|ref|ZP_01254198.1| OmpA family protein [Psychroflexus torquis ATCC 700755]
gi|91184580|gb|EAS70962.1| OmpA family protein [Psychroflexus torquis ATCC 700755]
Length = 616
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 51/123 (41%), Gaps = 4/123 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELG 93
+ E + E + + +FFD +I+P L L L+++ + + + H DE G
Sbjct: 492 VPEMTSTEAKILILQERIFFDYDKVNIKPEAAFELDKLIEILKENENINIQVVSHTDERG 551
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG---HDEDAYAKNRRAI 150
S ++ L RA + Y + G+ R+ GK E+ + +NRR+
Sbjct: 552 SGAYNMKLSQDRAGSTVAYLIENGVDPERLSSEGKGKSELIKDCISGCSEEEHEENRRSE 611
Query: 151 VFL 153
+
Sbjct: 612 FKI 614
>gi|72161146|ref|YP_288803.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Thermobifida fusca YX]
gi|71914878|gb|AAZ54780.1| similar to Outer membrane protein and related
peptidoglycan-associated (lipo)proteins [Thermobifida
fusca YX]
Length = 310
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 40/123 (32%), Gaps = 3/123 (2%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNS 97
Q ++ V F + + I L D I+G+ D+ G+ +
Sbjct: 152 EPQADPPRTITAVVHFSHNGTELTYEGIVELQRFAEEAAAADASWVRIDGYGDDTGTPEA 211
Query: 98 SIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
++ + L+R+ + +G P + A+NRR + G
Sbjct: 212 NLQVSLQRSEEAAAFLQEMMPVDGVAFITAGHGAANPIADNSTVEGRARNRRIEA-VAGT 270
Query: 157 RAN 159
A+
Sbjct: 271 DAD 273
>gi|167623616|ref|YP_001673910.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis
HAW-EB4]
gi|167353638|gb|ABZ76251.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4]
Length = 289
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
Query: 54 FDTSSYSIRPADIQVLSNLGSW--LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
+++ + ++ + + +K+ LI+ + D G R+++ + +RA +V
Sbjct: 184 YESGGTELTRYAKSQIAKVQEYLAYDKNVDLVLIDAYTDSYGGRSANQRVSEQRADSVKE 243
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
FVA GI +R+ +G+ D ++NRR ++ +
Sbjct: 244 LFVASGIGQNRIHTLGHGERRHVASNQTIDERSRNRRVVIRIS 286
>gi|120599910|ref|YP_964484.1| OmpA/MotB domain-containing protein [Shewanella sp. W3-18-1]
gi|146292153|ref|YP_001182577.1| OmpA/MotB domain-containing protein [Shewanella putrefaciens CN-32]
gi|120560003|gb|ABM25930.1| OmpA/MotB domain protein [Shewanella sp. W3-18-1]
gi|145563843|gb|ABP74778.1| OmpA/MotB domain protein [Shewanella putrefaciens CN-32]
gi|319425449|gb|ADV53523.1| OmpA/MotB domain protein [Shewanella putrefaciens 200]
Length = 366
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 59/138 (42%), Gaps = 6/138 (4%)
Query: 22 DNLDTKISSPDT--VLNESSLQEQFSSSVGD--SVFFDTSSYSIRPADIQVLSNLGSW-L 76
D+ D ++P T V + + + D S+ F S ++ + + L ++
Sbjct: 219 DDKDQCPATPATHKVDSVGCTIYENVKNKEDVGSIQFANDSAVVKNVYYKDIERLANYLN 278
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSV 135
+ + I GHA +G ++ L +RA AV N V + + R+ YG P V
Sbjct: 279 KNPEFTVEIAGHASNVGKPEYNMVLSDKRADAVANILVEKFGISRSRVTSNGYGITQPLV 338
Query: 136 YGHDEDAYAKNRRAIVFL 153
G ++A+A NRR +
Sbjct: 339 AGDSKEAHAANRRIEAIV 356
>gi|209808859|ref|YP_002264397.1| outer membrane protein OmpA family [Aliivibrio salmonicida LFI1238]
gi|208010421|emb|CAQ80772.1| outer membrane protein OmpA family [Aliivibrio salmonicida LFI1238]
Length = 201
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/188 (13%), Positives = 65/188 (34%), Gaps = 29/188 (15%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDS--------- 51
M+ +++++ + + D + +P + + + D
Sbjct: 1 MKKLIYPTLITSLFLTACVSGDKDYIETPAPSQIADLRDNDNDGVINARDICPGTPRGAQ 60
Query: 52 -------------------VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADE 91
+ F +S I P + + + E + ++G A +
Sbjct: 61 IDNDGCAEYVEQSDKKDLKILFANNSSEISPIFKSEIRTMAEFLAEYPETSIQLQGFASQ 120
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
G+ +I L RA AV + G++ +++ +G + + G ++A NRR +
Sbjct: 121 QGNAEYNIRLSELRASAVRVALINYGVNPDKIETIGFGDTLLTAKGDSAVSHALNRRVVA 180
Query: 152 FLKGCRAN 159
+ G + +
Sbjct: 181 TVVGFKGD 188
>gi|91786415|ref|YP_547367.1| hypothetical protein Bpro_0505 [Polaromonas sp. JS666]
gi|91695640|gb|ABE42469.1| OmpA/MotB [Polaromonas sp. JS666]
Length = 220
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 46/128 (35%), Gaps = 10/128 (7%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD----FLIEGH 88
+ + SV F +S +RP +L +L L+ + + ++ G
Sbjct: 74 PLATGRVTLNNGRIGISGSVLFPLNSDQLRPDGRLLLKSLVPPLQVYLGERDELLMVSGF 133
Query: 89 ADELGSRNSSIAL------GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
D+ + + +RA V + G+ +SR ++G E P DE
Sbjct: 134 TDDKPIQEGNQRFADNLALSAQRALTVTRALIEEGMPSSRAFAAAFGAEQPVASNTDEKG 193
Query: 143 YAKNRRAI 150
A NRR
Sbjct: 194 RALNRRVE 201
>gi|332519342|ref|ZP_08395809.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
gi|332045190|gb|EGI81383.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
Length = 311
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 52/140 (37%), Gaps = 5/140 (3%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSS-----YSIRPADIQVLSNLG 73
SG + + +L +S+ + +V +
Sbjct: 171 SGPAEYSIATIDANDTSEQEALVALKEDIKANSLMLYFDTGAASINLTTQQREKVSKIVR 230
Query: 74 SWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
+ + I GH D G+R ++I LG RA +Y V GI+++++ S G + P
Sbjct: 231 YIDKVDNAKIRITGHTDNTGNRETNIGLGKNRAEFAKSYLVQNGITSNKINTFSKGPDEP 290
Query: 134 SVYGHDEDAYAKNRRAIVFL 153
E AKNRR +V +
Sbjct: 291 IADNSTEAGKAKNRRLVVTI 310
>gi|326402347|ref|YP_004282428.1| putative outer membrane protein [Acidiphilium multivorum AIU301]
gi|325049208|dbj|BAJ79546.1| putative outer membrane protein [Acidiphilium multivorum AIU301]
Length = 361
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVF 110
VFF+ ++ P Q++S + + G+ D G+ ++ L LRRA+ V
Sbjct: 258 VFFNWDKANLTPRAQQIVSEAAKASQTTKVTRLNVNGYTDTSGAPAYNMKLSLRRAHNVA 317
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
VA G+S + + + YG+ V +NRR + L
Sbjct: 318 AQLVADGVSKNDIVIKGYGETHLLVPTGPNVREPQNRRVEIIL 360
>gi|83854735|ref|ZP_00948265.1| OmpA family protein [Sulfitobacter sp. NAS-14.1]
gi|83842578|gb|EAP81745.1| OmpA family protein [Sulfitobacter sp. NAS-14.1]
Length = 176
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 4/100 (4%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FF+T SY + P L+ + ++I GH D S ++ L L RA AV +
Sbjct: 78 FFNTDSYRVHPQGRARLAE--FFKTTGAVSYIISGHTDSRASDAYNMKLSLNRANAVASI 135
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
A+ A V YG+ MP+ AKNRR +
Sbjct: 136 --AQQSGARIADVRGYGERMPAASNGTAGGMAKNRRVEII 173
>gi|182680245|ref|YP_001834391.1| OmpA/MotB domain-containing protein [Beijerinckia indica subsp.
indica ATCC 9039]
gi|182636128|gb|ACB96902.1| OmpA/MotB domain protein [Beijerinckia indica subsp. indica ATCC
9039]
Length = 345
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 45/118 (38%), Gaps = 12/118 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIEGHADELGS----R 95
+ FD+ + P Q L L + L ++GH D+
Sbjct: 225 FQSELLFDSGQARLNPIGRQELDTLATALNDLVKTIPADLPWVMRVDGHTDKKQIKSVQF 284
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L + RA AV +Y +G+ R+ +G P G E+A +NRR + +
Sbjct: 285 PSNWELSVARALAVVHYLTDKGVPPDRLAAAGFGSFQPLDPGDSEEALKRNRRIELKI 342
>gi|167839895|ref|ZP_02466579.1| hypothetical protein Bpse38_24699 [Burkholderia thailandensis
MSMB43]
Length = 215
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 10/116 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLS----NLGSWLEKHDCDFLIEGHADE------LGSR 95
+ SV F +S ++PA +L L ++L+ + ++ G AD+
Sbjct: 85 IGISGSVLFALNSDELQPAGRDLLKSLAGPLAAYLDANHEILMVSGFADDLQVRTGNRRF 144
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ L +RA V F+ G+ A+ + ++G E P D+ AKNRR +
Sbjct: 145 ADNWELSAKRALTVTRAFIDEGVPAASVFAAAFGSEQPVSPNSDDAGRAKNRRVEI 200
>gi|49182354|gb|AAT57679.1| OmpA [Pasteurella multocida]
Length = 353
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 50/121 (41%), Gaps = 10/121 (8%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRR 105
++ V F ++PA VL + + + + G+ D LGS ++ L RR
Sbjct: 233 TLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSASVAVAGYTDRLGSDAYNLKLSQRR 292
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLKGC 156
A V NY VA+G++ + + T +G+ P A +RR + + G
Sbjct: 293 ADTVANYLVAKGVAQNAISATGHGEANPVTGNKCDSVKGRKALIACLADDRRVEIAVXGN 352
Query: 157 R 157
+
Sbjct: 353 K 353
>gi|313675340|ref|YP_004053336.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
gi|312942038|gb|ADR21228.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
Length = 745
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 44/110 (40%), Gaps = 6/110 (5%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADELGSRNSSIALGLRRAYA 108
++FD IR + L + ++ + + + H D GS ++ L +RA A
Sbjct: 633 QPIYFDLGKSEIRKDAAKELDKIVEVMKANPKMVIELGSHTDARGSDAFNLRLSDKRAKA 692
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHD-----EDAYAKNRRAIVFL 153
Y V++GI R+ YG+ + E+ + NRR +
Sbjct: 693 SAAYIVSQGIDEDRISGKGYGETQLINDCGNGVNCSEEEHQLNRRTEFKV 742
>gi|322435205|ref|YP_004217417.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
gi|321162932|gb|ADW68637.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
Length = 281
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 1/136 (0%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-E 77
+ + S D N ++ + + VFFD S +RP +++ +
Sbjct: 144 TSSVPVGGTTSGLDAAANGGNVTDAAFHAAVQDVFFDYDSIELRPDGQTAAVQAATYMSQ 203
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+ L+ G+ DE GS ++ALG RA A V G++A+R++ SYGKE
Sbjct: 204 HPNLHILVGGYCDERGSAEYNLALGENRANAAKTALVNAGVAANRIRTISYGKEKQFCTE 263
Query: 138 HDEDAYAKNRRAIVFL 153
+E + +NRRA +
Sbjct: 264 ANEACWQQNRRAQFSI 279
>gi|188575822|ref|YP_001912751.1| OmpA family membrane protein [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188520274|gb|ACD58219.1| OmpA family membrane protein [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 438
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 52/148 (35%), Gaps = 5/148 (3%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS 70
+A+ +I + L + + + + + + F + S + +L
Sbjct: 287 AAVRAATIPALAPLLAAEQRAGLLTVHTDGDGRSTVRLASASMFPSGSAELDADQTHLLE 346
Query: 71 NLGSWLEKHDCDFLIEGHADELG----SRNSSIALGLRRAYAVFNYFVARGISASRMKVT 126
+ + LE+ ++ GH D+ + AL RRA +V A R++ +
Sbjct: 347 RVAAALEQVPGRVVVVGHTDDQPVRSLRFKDNFALSARRAESVGAVLAAGLRDRRRVQTS 406
Query: 127 SYGKEMPSV-YGHDEDAYAKNRRAIVFL 153
G P A+NRR + L
Sbjct: 407 GAGDSQPIALPPQLPGNRARNRRVEILL 434
>gi|187919198|ref|YP_001888229.1| hypothetical protein Bphyt_4485 [Burkholderia phytofirmans PsJN]
gi|187717636|gb|ACD18859.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
Length = 215
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 10/116 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH----DCDFLIEGHADELG------SR 95
+ +V F +S ++P +L +L L + D ++ G D+
Sbjct: 85 IGISGNVLFALNSDQLQPQGRDLLKSLAGPLSAYLGANDEILMVSGFTDDQRLREGNRRF 144
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ L +RA V + G+ AS + ++G P DE AKNRR +
Sbjct: 145 ADNWELSAQRALTVTRALIDDGVPASSLFAAAFGSGQPVSSNTDEQGRAKNRRVEI 200
>gi|221134115|ref|ZP_03560420.1| putative outer membrane adhesin like proteiin [Glaciecola sp.
HTCC2999]
Length = 2282
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 46/107 (42%), Gaps = 4/107 (3%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAV 109
++ F +S + D + L ++++ + +IEGH D G+ + L +RA V
Sbjct: 2168 NLLFAINSSQLTSNDKLEVMKLATFMQTYPDTSVVIEGHTDARGTDKYNQWLSQQRAAVV 2227
Query: 110 FNYFVARGIS-ASRMKVTSYGKEMPSVYGHDEDAYAKNRR--AIVFL 153
+ + R++ +G+ + E +A NRR A + +
Sbjct: 2228 GKLLINQHNIAPERIETIGFGETQLLIDATTEAQHALNRRTIAEITI 2274
>gi|295395656|ref|ZP_06805848.1| peptidoglycan-associated lipoprotein OprL [Brevibacterium
mcbrellneri ATCC 49030]
gi|294971472|gb|EFG47355.1| peptidoglycan-associated lipoprotein OprL [Brevibacterium
mcbrellneri ATCC 49030]
Length = 602
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 54/137 (39%), Gaps = 12/137 (8%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-- 81
++T+ + +V N + +V V F+ S + + + ++ L+K
Sbjct: 269 VNTESVTDASVSNRGDTS---ALNVSADVLFEFDSDKLNKDAQKTIDSVAEELKKSAKGQ 325
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDE 140
++EGH D+ G + L RRA +V + A +++ +G+ P V D
Sbjct: 326 KVVVEGHTDDEGDEGYNQGLSERRAESVKKAVEPKLSGAGIQLETKGFGETKPIVPNRDG 385
Query: 141 DA------YAKNRRAIV 151
AKNRR
Sbjct: 386 KGNPIKKNQAKNRRVSF 402
>gi|294676060|ref|YP_003576675.1| OmpA/MotB domain-containing protein [Rhodobacter capsulatus SB
1003]
gi|294474880|gb|ADE84268.1| OmpA/MotB domain protein [Rhodobacter capsulatus SB 1003]
Length = 223
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 17/163 (10%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTVLN-------------ESSLQEQFSSSVGDSVFF 54
I+ A+ + SG + + SL +F+ V ++V F
Sbjct: 13 IVAGALALAGCSGAEVGSQYETGGFGNATMNNTLMMTGQRDFAVSLTRKFAQDVPNTVNF 72
Query: 55 DTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYF 113
+S + L+ +W+++ F + GH D +GS + ALGLRRA AV +
Sbjct: 73 AFNSDRLDGTAQAALAQQANWIKQFPEVKFRVYGHTDLVGSDAYNKALGLRRARAVVAFL 132
Query: 114 VARGISASRMKVT-SYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+GIS SR++ SYGK P VY D A+NRR + + G
Sbjct: 133 TGQGISRSRLEAVVSYGKTQPLVY--DPGPNAQNRRTVTEVSG 173
>gi|262402315|ref|ZP_06078876.1| outer membrane protein [Vibrio sp. RC586]
gi|262351097|gb|EEZ00230.1| outer membrane protein [Vibrio sp. RC586]
Length = 212
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 56/108 (51%), Gaps = 1/108 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVF 110
+ F S +I PA + + + +L+ + ++G+A ++G ++AL +R+ AV
Sbjct: 91 ILFANDSSAIEPAFLTQIRQMAEFLKTYPSTSIELQGYASKVGGAEHNLALSKQRSEAVR 150
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
+ + GI+ +R+ + YG + G D+ ++A+NRR + G +
Sbjct: 151 DQLLRYGITPNRVNIVGYGDSVLEADGTDDVSHARNRRVTATVVGYKG 198
>gi|148259194|ref|YP_001233321.1| OmpA/MotB domain-containing protein [Acidiphilium cryptum JF-5]
gi|146400875|gb|ABQ29402.1| OmpA/MotB domain protein [Acidiphilium cryptum JF-5]
Length = 361
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVF 110
VFF+ ++ P Q++S + + G+ D G+ ++ L LRRA+ V
Sbjct: 258 VFFNWDKANLTPRAQQIVSEAAKASQTTKVTRLNVNGYTDTSGAPAYNMKLSLRRAHNVA 317
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
VA G+S + + + YG+ V +NRR + L
Sbjct: 318 AQLVADGVSKNDIVIKGYGETHLLVPTGPNVREPQNRRVEIIL 360
>gi|56707940|ref|YP_169836.1| OmpA family protein [Francisella tularensis subsp. tularensis SCHU
S4]
gi|110670411|ref|YP_666968.1| OmpA family protein [Francisella tularensis subsp. tularensis
FSC198]
gi|224457021|ref|ZP_03665494.1| OmpA family protein [Francisella tularensis subsp. tularensis
MA00-2987]
gi|254370429|ref|ZP_04986434.1| OmpA family protein [Francisella tularensis subsp. tularensis
FSC033]
gi|254874744|ref|ZP_05247454.1| ompA family protein [Francisella tularensis subsp. tularensis
MA00-2987]
gi|54114377|gb|AAV29822.1| NT02FT0718 [synthetic construct]
gi|56604432|emb|CAG45464.1| OmpA family protein [Francisella tularensis subsp. tularensis SCHU
S4]
gi|110320744|emb|CAL08847.1| OmpA family protein [Francisella tularensis subsp. tularensis
FSC198]
gi|151568672|gb|EDN34326.1| OmpA family protein [Francisella tularensis subsp. tularensis
FSC033]
gi|254840743|gb|EET19179.1| ompA family protein [Francisella tularensis subsp. tularensis
MA00-2987]
gi|282159125|gb|ADA78516.1| OmpA family protein [Francisella tularensis subsp. tularensis
NE061598]
Length = 417
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/179 (18%), Positives = 65/179 (36%), Gaps = 26/179 (14%)
Query: 2 QYSTIFIILSAITMMSISGI-DNLDTKISSPDTVLNESSLQEQFSSS------------- 47
+ + ++ S IT +S D+ D E E S+
Sbjct: 3 KLLKLCLMTSLITTLSACQTLDDKDKDSGPLTFPTLEPCTAELLQSNQSFICVKEQTGPD 62
Query: 48 -VGDSVFFDTSSYSIRPADIQVLSNLGSW----------LEKHDCDFLIEGHADELGSRN 96
+ ++ FD SY++ +VL L ++ ++ + + D+ +
Sbjct: 63 LIETNIKFDADSYTLNTQAKEVLDKLFAYLKLTDTTNFTIKGYAGKVESKILTDQKILTD 122
Query: 97 SSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+I L RA +V Y V +G S+ + + + G + P + A N+R + LK
Sbjct: 123 YNIRLSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDSTSSRAINQRVEITLK 181
>gi|312270751|gb|ADQ55776.1| OmpA [Haemophilus parasuis]
Length = 367
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 52/123 (42%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + + G+ D +G +++ L
Sbjct: 241 AFSSDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 300
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 301 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQVQ 360
Query: 155 GCR 157
G +
Sbjct: 361 GSK 363
>gi|312270727|gb|ADQ55764.1| OmpA [Haemophilus parasuis]
Length = 365
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 52/123 (42%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + + G+ D +G +++ L
Sbjct: 239 AFSSDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 298
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 299 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQVQ 358
Query: 155 GCR 157
G +
Sbjct: 359 GSK 361
>gi|288927607|ref|ZP_06421454.1| OmpA family protein [Prevotella sp. oral taxon 317 str. F0108]
gi|288330441|gb|EFC69025.1| OmpA family protein [Prevotella sp. oral taxon 317 str. F0108]
Length = 676
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 47/138 (34%), Gaps = 28/138 (20%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGL 103
+ + D++F+D Y++RP Q L L E + + H D G+ + L
Sbjct: 504 APVLIDNIFYDLDKYTLRPESKQALDELVKLLNENPNVTIELSAHCDYRGTPEYNKVLSQ 563
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMP---------------------------SVY 136
RA AV Y + GI+ R+ YGKE P
Sbjct: 564 HRANAVVQYLIDAGIAPQRLTPVGYGKEKPKTIRKKLTERYKWLKEGDVLTEDFITKLDK 623
Query: 137 GHDEDAYAKNRRAIVFLK 154
E NRR ++
Sbjct: 624 DKQEICNQLNRRTEFVVQ 641
>gi|104780417|ref|YP_606915.1| OmpA/MotB family outer membrane protein [Pseudomonas entomophila
L48]
gi|95109404|emb|CAK14104.1| putative outer membrane protein, OmpA/MotB family [Pseudomonas
entomophila L48]
Length = 325
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 35/73 (47%)
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++GH+D G+R ++ RRA AV Y A G+ ++ V +G+ P +
Sbjct: 208 NHIELDGHSDNSGNRLTNRDTSRRRALAVAEYLKAHGVPEDQITVRFHGERYPLAKNNSA 267
Query: 141 DAYAKNRRAIVFL 153
A+NRR + L
Sbjct: 268 ANRARNRRVNIQL 280
>gi|71282015|ref|YP_270145.1| sodium-type flagellar protein MotY [Colwellia psychrerythraea 34H]
gi|71147755|gb|AAZ28228.1| sodium-type flagellar protein MotY [Colwellia psychrerythraea 34H]
Length = 291
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYAVFN 111
+ +SS A + + + +L LI+ ++D G R S++ L RRA + +
Sbjct: 187 YQSSSDKFTKASQRRIEMIRQYLSLDPELELVLIDAYSDSYGGRWSNLKLSERRAAKIRD 246
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
YFV GI SR++ YG++ KNRR ++
Sbjct: 247 YFVENGIEVSRIEAKGYGEKRHISSNDTTLGRGKNRRVVI 286
>gi|299773281|gb|ADJ38715.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 367
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 52/123 (42%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + + G+ D +G +++ L
Sbjct: 241 AFSSDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 300
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 301 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKAIITCLAPDRRVEIQVQ 360
Query: 155 GCR 157
G +
Sbjct: 361 GSK 363
>gi|328473741|gb|EGF44576.1| hypothetical protein VP10329_13800 [Vibrio parahaemolyticus 10329]
Length = 300
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 52/141 (36%), Gaps = 1/141 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
T D + N+ ++ + + F S I P + L+ L H
Sbjct: 134 TQTTCTPPDDIDALRNDLNIVADIYALLNVDNQFAIDSAEINPKYMGHLAEAAYILRDHP 193
Query: 81 C-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
++ GHAD G+ + L RA V Y G+++ R++ S G +P G
Sbjct: 194 ALSLVVTGHADVTGTPEHNKKLAQERAEQVKRYLSVFGVASDRVQTKSVGDTLPLYEGQT 253
Query: 140 EDAYAKNRRAIVFLKGCRANT 160
NRR + + +++
Sbjct: 254 PAVRLTNRRVSIEVLSANSDS 274
>gi|317503691|ref|ZP_07961708.1| OmpA family protein [Prevotella salivae DSM 15606]
gi|315665212|gb|EFV04862.1| OmpA family protein [Prevotella salivae DSM 15606]
Length = 683
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 49/137 (35%), Gaps = 28/137 (20%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGL 103
+ + D++F+D + ++RP L + + E I H D GS ++ L
Sbjct: 513 APVLIDNIFYDFNKATLRPESTAALDDLVALLNENPHVTIEISAHCDYRGSAEYNLRLSQ 572
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMP---------------------------SVY 136
+RA V Y +++GISA R+ YGK+ P
Sbjct: 573 QRAENVVRYLISKGISADRLTAVGYGKQRPKVIRKKLTEKYTWLKEGDKLTSAFIEKLNK 632
Query: 137 GHDEDAYAKNRRAIVFL 153
E NRR +
Sbjct: 633 EQQEICNQLNRRTEFSV 649
>gi|126741160|ref|ZP_01756841.1| OmpA/MotB domain protein [Roseobacter sp. SK209-2-6]
gi|126717797|gb|EBA14518.1| OmpA/MotB domain protein [Roseobacter sp. SK209-2-6]
Length = 140
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 49/138 (35%), Gaps = 4/138 (2%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
+ + D + ++ E + S + + FD S ++R L+N+ +
Sbjct: 1 ATSANTTAADEQETTTIAAAAEEYTPVERQSQINVQISFDFDSATLRSDQKPKLANMCTS 60
Query: 76 LEKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMP 133
++ I GH D GS + L L RA V + ++ A ++ G+ P
Sbjct: 61 MKAMTGTVFQIIGHTDSSGSAKYNERLSLLRAQEVRRHLISSCGVAENSLRAIGMGETAP 120
Query: 134 SVYGHDEDAYAKNRRAIV 151
+NRR
Sbjct: 121 FNQNDPRAD--ENRRVEF 136
>gi|290954085|ref|ZP_06558706.1| ompA family protein [Francisella tularensis subsp. holarctica
URFT1]
gi|295312516|ref|ZP_06803280.1| ompA family protein [Francisella tularensis subsp. holarctica
URFT1]
Length = 363
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 65/179 (36%), Gaps = 26/179 (14%)
Query: 2 QYSTIFIILSAITMMSISGI-DNLDTKISSPDTVLNESSLQEQFSSS------------- 47
+ + ++ S +T +S D+ D E E S+
Sbjct: 3 KLLKLCLMTSLLTTLSACQTLDDKDKDSGPLTFPTLEPCTAELLQSNQSFICVKEQTGPD 62
Query: 48 -VGDSVFFDTSSYSIRPADIQVLSNLGSW----------LEKHDCDFLIEGHADELGSRN 96
+ ++ FD SY++ +VL L ++ ++ + + D+ +
Sbjct: 63 LIETNIKFDADSYTLNTQAKEVLDKLFAYLKLTDTTNFTIKGYAGKVESKILTDQKILTD 122
Query: 97 SSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+I L RA +V Y V +G S+ + + + G + P + A N+R + LK
Sbjct: 123 YNIRLSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDSTSSRAINQRVEITLK 181
>gi|187924070|ref|YP_001895712.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
gi|187715264|gb|ACD16488.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
Length = 204
Score = 61.4 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/145 (21%), Positives = 56/145 (38%), Gaps = 9/145 (6%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGD-------SVFFDTSSY-SIRPADIQVLS 70
+G+D P + ++FF S + P +
Sbjct: 60 AGVDVTKGGSIEPTVDSQSTVQARYGELLAARPPRPMTFTIFFLFDSATELAPESAATVQ 119
Query: 71 NLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
L + L ++ GH D GS+ + L ++RA V + + +GI A R++ + G
Sbjct: 120 KLKTVLATWPAPQLVVVGHTDLAGSQEFNDRLSMQRAQTVAAFLIKQGIPAQRIETAARG 179
Query: 130 KEMPSVYGHDEDAYAKNRRAIVFLK 154
K P V D + NRRA++ ++
Sbjct: 180 KREPLVPTADGVPHRMNRRAVITIQ 204
>gi|298487201|ref|ZP_07005250.1| Phosphate-binding protein [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|298158225|gb|EFH99296.1| Phosphate-binding protein [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
Length = 408
Score = 61.4 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 48/141 (34%), Gaps = 5/141 (3%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+I K+ + + + + + + F S + Q L + +L
Sbjct: 270 AIVAQTVQALKVQPTAQMPADYQALARKAERLSVNFRFAQGSAKLDNKAQQDLKRVAEYL 329
Query: 77 EKHDC---DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
+ + + G D + L RA AV + G++ + G EMP
Sbjct: 330 KTSNQLNQHVTLVGFGDAKSDPARAALLSRLRAMAVRRELLKSGVTFRDI--VGLGDEMP 387
Query: 134 SVYGHDEDAYAKNRRAIVFLK 154
+D KNRR V+++
Sbjct: 388 VATNDIDDGRIKNRRVEVWVQ 408
>gi|259419273|ref|ZP_05743190.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
gi|259345495|gb|EEW57349.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
Length = 1617
Score = 61.4 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 4/118 (3%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGS 94
+++F S+ +V F T IR A + VL L+ + FLIEGH D GS
Sbjct: 449 KDWEQRFGDSLRVTVEFATGKADIREAGLGVLKQAADALKALGAENYVFLIEGHTDITGS 508
Query: 95 RNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
++ L RA +V YF + GI+ R++ YG +P + NRR +
Sbjct: 509 DKVNLPLSDARAKSVEQYFVESAGIAPERLQTVGYGSRIPLATNATDRGKQTNRRVEI 566
>gi|149202108|ref|ZP_01879081.1| OmpA family protein [Roseovarius sp. TM1035]
gi|149144206|gb|EDM32237.1| OmpA family protein [Roseovarius sp. TM1035]
Length = 179
Score = 61.4 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 43/104 (41%), Gaps = 4/104 (3%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
V F T S I + Q L + + + I GH D S ++ L LRRA
Sbjct: 76 VNTDQLFATDSARIHASGQQRLRE--FFQQAGAVSYTIVGHTDSRASDEYNMDLSLRRAN 133
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+V AR AS V YG+ +P + + A+NRR +
Sbjct: 134 SVAAV--ARSSGASIADVRGYGERVPKASNNTAEGMAQNRRVEI 175
>gi|85705227|ref|ZP_01036326.1| OmpA family protein [Roseovarius sp. 217]
gi|85670100|gb|EAQ24962.1| OmpA family protein [Roseovarius sp. 217]
Length = 191
Score = 61.4 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 4/104 (3%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
V F T S I + Q L + + + + I GH D S ++ L LRRA
Sbjct: 88 VNTDQLFATDSSRIGASGQQRLRE--FFQQANAVSYTIVGHTDSRASDEYNMGLSLRRAN 145
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+V ARGI AS V YG+ MP + + A+NRR +
Sbjct: 146 SVAAV--ARGIGASIADVRGYGERMPKASNNTAEGMAQNRRVEI 187
>gi|269968783|ref|ZP_06182772.1| outer membrane protein, putative [Vibrio alginolyticus 40B]
gi|269826595|gb|EEZ80940.1| outer membrane protein, putative [Vibrio alginolyticus 40B]
Length = 213
Score = 61.4 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 55/138 (39%), Gaps = 1/138 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
D + + S + V F S I P Q + L +L+++
Sbjct: 61 DLCPGTPLGAEIDNDGCGSYVDSSQEMQIRVLFANDSDVINPIFTQQIRELSDFLKEYPN 120
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
I+G+A G+ ++ L RRA V + GIS R+ + YG + + G D+
Sbjct: 121 TSIEIQGYASRTGTAEHNLDLSKRRAENVRKELMTNGISGDRVTIVGYGDTVLATQGTDQ 180
Query: 141 DAYAKNRRAIVFLKGCRA 158
++A NRR + G +
Sbjct: 181 VSHALNRRVTATVIGHKG 198
>gi|170696031|ref|ZP_02887168.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
gi|170139023|gb|EDT07214.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
Length = 646
Score = 61.4 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 43/124 (34%), Gaps = 6/124 (4%)
Query: 34 VLNESSLQEQFSSSVGDSVF-FDTSSYSIRPADIQVLSN-----LGSWLEKHDCDFLIEG 87
N + + + + V F +SS + A + L + G
Sbjct: 519 TGNPTCVAADIAKVLNLQVINFGSSSARVPAAANEDLGQSARVLNACARNGRVAKLEVAG 578
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
++D +G +++ L RA AV +Y V G+ ++ YG+ P NR
Sbjct: 579 YSDNVGGEQANLQLSKERAEAVRSYLVKAGVPGDSLRAQGYGQAHPIAGNDTASGRFANR 638
Query: 148 RAIV 151
R
Sbjct: 639 RIEF 642
>gi|257866373|ref|ZP_05646026.1| flagellar motor protein MotB [Enterococcus casseliflavus EC30]
gi|257873111|ref|ZP_05652764.1| flagellar motor protein MotB [Enterococcus casseliflavus EC10]
gi|257800331|gb|EEV29359.1| flagellar motor protein MotB [Enterococcus casseliflavus EC30]
gi|257807275|gb|EEV36097.1| flagellar motor protein MotB [Enterococcus casseliflavus EC10]
Length = 256
Score = 61.4 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 47/139 (33%), Gaps = 7/139 (5%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDC 81
+ + S + ++ S+ F + S I Q L L +
Sbjct: 110 SQELAASGLKEQTEVRLESDGLHITLASSILFASGSAEITDTTRQSLDLLSDSLKKLKAN 169
Query: 82 DFLIEGHADELGS-----RNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSV 135
+I GH D + S+ L RA V YF+++G + ++ P
Sbjct: 170 KIVIAGHTDNVPEKGNGRYQSNWDLSSARAITVMEYFISKGAVLEKNAAIQAFADTEPKA 229
Query: 136 YGHDEDAYAKNRRAIVFLK 154
+ ++NRR + ++
Sbjct: 230 DNNTPQGRSENRRVEMIIQ 248
>gi|330447358|ref|ZP_08311007.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328491549|dbj|GAA05504.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 200
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 55/131 (41%), Gaps = 2/131 (1%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLI 85
+ N S Q ++ + F S + P ++ L +++++ I
Sbjct: 55 SAVGAEVDNNGCSSQSEYIVRRDLHINFANDSAVVEPQYQGQIAKLADFMKQYPASKVTI 114
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYA 144
EGH ++G + ++ L RRA V + ISA+R+K YG G E+A
Sbjct: 115 EGHTSKVGRYDYNMVLSQRRAENVATDLEHQFGISANRIKAIGYGYTHLLDTGMTEEANQ 174
Query: 145 KNRRAIVFLKG 155
KNRR + + G
Sbjct: 175 KNRRIVAAVSG 185
>gi|283853398|ref|ZP_06370644.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B]
gi|283571211|gb|EFC19225.1| OmpA/MotB domain protein [Desulfovibrio sp. FW1012B]
Length = 301
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 37/104 (35%), Gaps = 10/104 (9%)
Query: 61 IRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNS----SIALGLRRAYAVFNYFVAR 116
I+ + +L ++ + L +EGH D + + L RA V +
Sbjct: 197 IKSGGLPLLRDIAATLSGTPYRVTVEGHTDNRPIESWLYPSNWELSSARASRVARLLIDG 256
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAY------AKNRRAIVFLK 154
G+ A M+V P D A+NRR ++ +
Sbjct: 257 GVPAGHMRVEGLADTQPVAPNTDPAGRSIAENQARNRRVVILVS 300
>gi|209968926|gb|ACJ02824.1| outer membrane protein P5 [Haemophilus parasuis]
gi|224714285|gb|ACN62137.1| outer membrane protein A [Haemophilus parasuis]
Length = 365
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 52/123 (42%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + + G+ D +G +++ L
Sbjct: 239 AFSSDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 298
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 299 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQVQ 358
Query: 155 GCR 157
G +
Sbjct: 359 GSK 361
>gi|163786795|ref|ZP_02181243.1| hypothetical protein FBALC1_16457 [Flavobacteriales bacterium
ALC-1]
gi|159878655|gb|EDP72711.1| hypothetical protein FBALC1_16457 [Flavobacteriales bacterium
ALC-1]
Length = 637
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 41/106 (38%), Gaps = 4/106 (3%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
++F+ ++ L L + D H D +GS ++ L RRA
Sbjct: 524 IYFEYDKSNVTAQAAFELDKLVQIMNKYPDLVINATSHTDYIGSAPYNMRLSDRRAKTTV 583
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGH---DEDAYAKNRRAIVFL 153
Y +++GI SR+ G+ P + ++ NRR+ +
Sbjct: 584 QYVISKGIDESRISGVGKGETEPKIDCGTKCTDEERQMNRRSEFII 629
>gi|312270745|gb|ADQ55773.1| OmpA [Haemophilus parasuis]
Length = 367
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 52/123 (42%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + + G+ D +G +++ L
Sbjct: 241 AFSSDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 300
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 301 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQVQ 360
Query: 155 GCR 157
G +
Sbjct: 361 GSK 363
>gi|224714275|gb|ACN62132.1| outer membrane protein A [Haemophilus parasuis]
Length = 367
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 52/123 (42%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + + G+ D +G +++ L
Sbjct: 241 AFSSDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 300
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 301 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQVQ 360
Query: 155 GCR 157
G +
Sbjct: 361 GSK 363
>gi|124002133|ref|ZP_01686987.1| outer membrane protein OmpA family [Microscilla marina ATCC 23134]
gi|123992599|gb|EAY31944.1| outer membrane protein OmpA family [Microscilla marina ATCC 23134]
Length = 617
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRA 106
+ VFF + + L ++L+ + + GH D++GS ++++AL +RA
Sbjct: 505 LSYRVFFMYKKAEMHKKSLPAAKALLTFLKNNPGVSIEVSGHTDDVGSNSNNVALSQQRA 564
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V+N+ V++GI R+ YG ++P + A NRR +
Sbjct: 565 NVVYNWLVSKGIEKERLVKKGYGAKVPIIPNETNYARIVNRRTDFRV 611
>gi|260890421|ref|ZP_05901684.1| OmpA family protein [Leptotrichia hofstadii F0254]
gi|260860041|gb|EEX74541.1| OmpA family protein [Leptotrichia hofstadii F0254]
Length = 180
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 53/167 (31%), Gaps = 14/167 (8%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVL-NESSLQEQFSSSVGDSVF------ 53
M+ I +++ + I + K+++ +T E Q
Sbjct: 1 MKKLIILLMIVTGMSVQAEEILKKEEKVNTENTNYIPEPPKSTQIICGFPPCDLTYGKCV 60
Query: 54 ---FDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYA 108
F + ++ L + + L H I GH D GS+ ++ L L RA
Sbjct: 61 VRGFKVDGEKMNESESYDLKYIANMLNTHIEKGSLEIIGHTDSTGSKKHNLKLSLERAIN 120
Query: 109 VFNYFVARGISASR--MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G+ +K+ G E P + NRR + L
Sbjct: 121 AAKLLREYGLDKRFSVVKIIGKGGEEPMDTNETVEGRYNNRRIEIIL 167
>gi|146301218|ref|YP_001195809.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
UW101]
gi|146155636|gb|ABQ06490.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
Length = 645
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 7/111 (6%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
++FD Y I P I+ L+ + + + IE H D G + ++ L RA +
Sbjct: 532 QPIYFDYDKYDITPKAIEELTKVVFIMQKFPNIKIKIESHTDSRGKDSYNLKLSDNRAKS 591
Query: 109 VFNYFVARGISASRM-KVTSYGKEMPSVYGH-----DEDAYAKNRRAIVFL 153
+Y +++GI ASR+ YG+ E+ + NRR+ +
Sbjct: 592 TRDYILSQGIDASRIESAIGYGESRLINKCKNGVKCTEEEHLLNRRSDFII 642
>gi|325954863|ref|YP_004238523.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
gi|323437481|gb|ADX67945.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
Length = 500
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 33/155 (21%), Positives = 56/155 (36%), Gaps = 12/155 (7%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSS--------VGDSVFFDTSSYS 60
+ + + + D D +E ++ F+ +S
Sbjct: 327 TVPGLAEFNGCPDTDGDGIPDKDDACPTVKGPKENNGCPWTEVEVAKRLSNILFEYNSDK 386
Query: 61 IRPADIQVLSNLGSWLEKHDC---DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR- 116
I P+ + + L D + I+GHAD+ G + AL L+RA A+ N V R
Sbjct: 387 IVPSSYEDVRIAAQILNSEDLLANSYYIDGHADQRGRDAYNKALSLKRAQALVNILVERG 446
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ R+ GK + E+ Y +NRR V
Sbjct: 447 NVDRKRLTARGLGKTQLLCTENTEECYQRNRRVEV 481
>gi|209968934|gb|ACJ02828.1| outer membrane protein P5 [Haemophilus parasuis]
gi|222831779|gb|ACJ23249.2| OmpA [Haemophilus parasuis]
gi|224714293|gb|ACN62141.1| outer membrane protein A [Haemophilus parasuis]
gi|224714317|gb|ACN62153.1| outer membrane protein A [Haemophilus parasuis]
gi|224714319|gb|ACN62154.1| outer membrane protein A [Haemophilus parasuis]
gi|224714321|gb|ACN62155.1| outer membrane protein A [Haemophilus parasuis]
gi|224714335|gb|ACN62162.1| outer membrane protein A [Haemophilus parasuis]
gi|299773259|gb|ADJ38704.1| outer membrane protein P5 [Haemophilus parasuis]
gi|299773265|gb|ADJ38707.1| outer membrane protein P5 [Haemophilus parasuis]
gi|299773271|gb|ADJ38710.1| outer membrane protein P5 [Haemophilus parasuis]
gi|299773273|gb|ADJ38711.1| outer membrane protein P5 [Haemophilus parasuis]
gi|299773275|gb|ADJ38712.1| outer membrane protein P5 [Haemophilus parasuis]
gi|299773279|gb|ADJ38714.1| outer membrane protein P5 [Haemophilus parasuis]
gi|299773287|gb|ADJ38718.1| outer membrane protein P5 [Haemophilus parasuis]
gi|312270747|gb|ADQ55774.1| OmpA [Haemophilus parasuis]
gi|312270749|gb|ADQ55775.1| OmpA [Haemophilus parasuis]
gi|312270753|gb|ADQ55777.1| OmpA [Haemophilus parasuis]
gi|312270755|gb|ADQ55778.1| OmpA [Haemophilus parasuis]
gi|312270757|gb|ADQ55779.1| OmpA [Haemophilus parasuis]
gi|312270759|gb|ADQ55780.1| OmpA [Haemophilus parasuis]
gi|312270761|gb|ADQ55781.1| OmpA [Haemophilus parasuis]
gi|312270763|gb|ADQ55782.1| OmpA [Haemophilus parasuis]
gi|312270765|gb|ADQ55783.1| OmpA [Haemophilus parasuis]
gi|312270767|gb|ADQ55784.1| OmpA [Haemophilus parasuis]
gi|312270769|gb|ADQ55785.1| OmpA [Haemophilus parasuis]
gi|312270771|gb|ADQ55786.1| OmpA [Haemophilus parasuis]
Length = 367
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 52/123 (42%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + + G+ D +G +++ L
Sbjct: 241 AFSSDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 300
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 301 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQVQ 360
Query: 155 GCR 157
G +
Sbjct: 361 GSK 363
>gi|58582662|ref|YP_201678.1| hypothetical protein XOO3039 [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|58427256|gb|AAW76293.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
KACC10331]
Length = 438
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 52/148 (35%), Gaps = 5/148 (3%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS 70
+A+ +I + L + + + + + + F + S + +L
Sbjct: 287 AAVRAATIPALAPLLAAEQRAGLLTVHTDGDGRSTVRLASASMFPSGSAELDADQTHLLE 346
Query: 71 NLGSWLEKHDCDFLIEGHADELG----SRNSSIALGLRRAYAVFNYFVARGISASRMKVT 126
+ + LE+ ++ GH D+ + AL RRA +V A R++ +
Sbjct: 347 RVAAALEQVPGRVVVVGHTDDQPVRSLRFKDNFALSARRAESVGAVLAAGLRDRRRVQTS 406
Query: 127 SYGKEMPSV-YGHDEDAYAKNRRAIVFL 153
G P A+NRR + L
Sbjct: 407 GAGDSQPIALPPQLPGNRARNRRVEILL 434
>gi|86132374|ref|ZP_01050968.1| OmpA family protein [Dokdonia donghaensis MED134]
gi|85816935|gb|EAQ38119.1| OmpA family protein [Dokdonia donghaensis MED134]
Length = 650
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/110 (25%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
+ ++FD ++IRP L + E + + H D G+ + +++L +RA +
Sbjct: 538 NPIYFDFDRFNIRPDAALELEKVLAVMREYPNMVIDVRSHTDSRGNDSYNLSLSDKRAKS 597
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHD-----EDAYAKNRRAIVFL 153
NY +A GIS+SR+ YG+ + + E+A+ NRR+ +
Sbjct: 598 TVNYIIAEGISSSRISGRGYGETQLTNECSNGVQCSEEAHQLNRRSEFIV 647
>gi|323344506|ref|ZP_08084731.1| OmpA family protein [Prevotella oralis ATCC 33269]
gi|323094633|gb|EFZ37209.1| OmpA family protein [Prevotella oralis ATCC 33269]
Length = 688
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 47/137 (34%), Gaps = 28/137 (20%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGL 103
+ + D++F+D ++RP + L L E + + H D GS + L
Sbjct: 514 APVLIDNIFYDFDKATLRPESTKALDELVKLLNENPNVTIELSAHCDYKGSDEYNKRLSQ 573
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMP---------------------------SVY 136
+RA AV Y + +GI+ R+ YGKE P
Sbjct: 574 QRANAVVAYLIDKGIAKDRLTPVGYGKEKPKTIRKKLTEKYDWMKEGDVLTEAYIKKLDD 633
Query: 137 GHDEDAYAKNRRAIVFL 153
E NRR +
Sbjct: 634 KKQELCNQLNRRTEFIV 650
>gi|297579202|ref|ZP_06941130.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|297536796|gb|EFH75629.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length = 212
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVF 110
+ F S SI PA + + + +L+ + ++G+A ++GS ++AL +R+ AV
Sbjct: 91 ILFANDSSSIEPAFLTQIRQMAEFLQTYPSTSIELQGYASKVGSAEHNLALSKQRSEAVR 150
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
+ + G++ R+ + YG + G D+ ++A+NRR I + G +
Sbjct: 151 DQLLRYGVAPERVNIVGYGDSVLEAEGTDDVSHARNRRVIATVVGYKG 198
>gi|126733574|ref|ZP_01749321.1| OmpA family protein [Roseobacter sp. CCS2]
gi|126716440|gb|EBA13304.1| OmpA family protein [Roseobacter sp. CCS2]
Length = 216
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/154 (23%), Positives = 70/154 (45%), Gaps = 11/154 (7%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQ-------FSSSVGDSVFFDTSSYSIRP 63
++ + S +D D ++ + L ++ Q+ F++ V +V F +S +
Sbjct: 27 ASFFTEAGSALDAGDFGEATMNNRLVQTGAQDYTINLARRFAAEVNTTVNFAFNSTVLDA 86
Query: 64 ADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASR 122
L W+ + F + GH D +GS+ + +LGLRRA A + ++GI+ +R
Sbjct: 87 DARSTLMRQADWIRQFPEVRFKVYGHTDLVGSQGYNRSLGLRRAQAAVAFLASQGINRNR 146
Query: 123 MKVT-SYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
++ S+G+ P V + NRR + + G
Sbjct: 147 LEAVVSFGETQPLVVTDGRERR--NRRTVTEVTG 178
>gi|239816213|ref|YP_002945123.1| hypothetical protein Vapar_3239 [Variovorax paradoxus S110]
gi|239802790|gb|ACS19857.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
Length = 218
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 47/133 (35%), Gaps = 13/133 (9%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS----NLGSWLEKHDCDFLIE 86
+ + SV F +S ++P QVL + S+L D ++
Sbjct: 70 AGPLAAGRVTLNNGRIGISGSVLFAFNSAELQPEGRQVLKSLAAPVASYLRARDEVLMVS 129
Query: 87 GHADELGSRN---------SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
G D+ R + L +RA V + G+ +S + ++G E
Sbjct: 130 GFTDDRQMRQSKDGNRPFADNWELSAQRALTVTRALIEEGVPSSSVFAAAFGSEQAVASN 189
Query: 138 HDEDAYAKNRRAI 150
D + AKNRR
Sbjct: 190 ADAEGRAKNRRVE 202
>gi|19881379|gb|AAM00932.1|AF491824_1 hemagglutinin antigen [Avibacterium paragallinarum]
Length = 344
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 10/120 (8%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRR 105
++ V F ++RP VL + + + + G+ D +GS +++ L RR
Sbjct: 224 ALNSDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDLAGYTDRIGSEAANLKLSQRR 283
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLKGC 156
A V NY V++G++ + T YG+ P A +RR + +KG
Sbjct: 284 ADTVANYLVSKGVAQEVISSTGYGEANPVTGAKCDAVKGRKALIACLADDRRVEISVKGN 343
>gi|19881371|gb|AAM00928.1|AF491820_1 hemagglutinin antigen [Avibacterium paragallinarum]
gi|19881381|gb|AAM00933.1|AF491825_1 hemagglutinin antigen [Avibacterium paragallinarum]
gi|19881383|gb|AAM00934.1|AF491826_1 hemagglutinin antigen [Avibacterium paragallinarum]
gi|38385761|gb|AAR19399.1| hemagglutinin antigen [Avibacterium paragallinarum]
gi|89147814|gb|ABD62756.1| hemagglutinin antigen [Avibacterium paragallinarum]
Length = 344
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 10/120 (8%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRR 105
++ V F ++RP VL + + + + G+ D +GS +++ L RR
Sbjct: 224 ALNSDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDLAGYTDRIGSEAANLKLSQRR 283
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLKGC 156
A V NY V++G++ + T YG+ P A +RR + +KG
Sbjct: 284 ADTVANYLVSKGVAQEVISSTGYGEANPVTGAKCDAVKGRKALIACLADDRRVEISVKGN 343
>gi|260769571|ref|ZP_05878504.1| outer membrane protein A precursor [Vibrio furnissii CIP 102972]
gi|260614909|gb|EEX40095.1| outer membrane protein A precursor [Vibrio furnissii CIP 102972]
Length = 316
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 40/117 (34%), Gaps = 3/117 (2%)
Query: 41 QEQFSSSVGDSVFFDTS---SYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNS 97
E + + F Y + + L+ GHAD GS
Sbjct: 199 AESIENMLSGQYAFHFGFDIHYEALEDVFVYSKVIDCISKDSRIKVLLVGHADNQGSNQY 258
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ AL LRRA + N V G+ ++ + + G P + KNRR + L
Sbjct: 259 NYALSLRRAVTISNILVELGVDPEQIVIEARGDSEPIANNAILEQRKKNRRVEMILS 315
>gi|257487833|ref|ZP_05641874.1| OmpA family protein [Pseudomonas syringae pv. tabaci ATCC 11528]
gi|331008545|gb|EGH88601.1| OmpA family protein [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 447
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 51/149 (34%), Gaps = 7/149 (4%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
+ A + + L + ++ + + + + + F S + Q
Sbjct: 303 AIVAQSGFVAQTVQALKVQPTAQMPA--DYQALARKAERLSVNFRFAQGSAKLDNKAQQD 360
Query: 69 LSNLGSWLEKHDC---DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
L + +L+ + + G D + L RA AV + G++ +
Sbjct: 361 LKRVAEYLKTSNQLNQHVTLVGFGDAKSDPARAALLSRLRAMAVRRELLKSGVTFRDI-- 418
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G EMP +D KNRR V+++
Sbjct: 419 VGLGDEMPVATNEIDDGRIKNRRVEVWVQ 447
>gi|254510741|ref|ZP_05122808.1| OmpA domain protein [Rhodobacteraceae bacterium KLH11]
gi|221534452|gb|EEE37440.1| OmpA domain protein [Rhodobacteraceae bacterium KLH11]
Length = 300
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 51/142 (35%), Gaps = 9/142 (6%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVG-------DSVFFDTSSYSIRPADIQVLSNLG 73
+ + + P + + S +G D + F T ++ L+ L
Sbjct: 156 VTPAGAQPAPPLVIEETADSSAGLLSDLGRDGHVILDDLHFRTGEVALGEGPFASLTLLA 215
Query: 74 SWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKE 131
+L + + GH D+ G ++IA+ +RA AV + G++A R++ G
Sbjct: 216 DYLADNPGTRLALVGHTDDTGDLQANIAVSTKRAEAVRARLIETYGVAADRIEAQGVGYL 275
Query: 132 MPSVYGHDEDAYAKNRRAIVFL 153
P NRR L
Sbjct: 276 APITSNATPAGRDINRRVEAVL 297
>gi|91779292|ref|YP_554500.1| hypothetical protein Bxe_B0804 [Burkholderia xenovorans LB400]
gi|91691952|gb|ABE35150.1| outer membrane protein, OmpA/MotB family [Burkholderia xenovorans
LB400]
Length = 215
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 47/116 (40%), Gaps = 10/116 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLG----SWLEKHDCDFLIEGHADELG------SR 95
+ +V F +S ++P +L +L ++L +D ++ G D+
Sbjct: 85 IGISGNVLFALNSDQLQPQGRDLLKSLAGPLSAYLRANDEILMVSGFTDDQRLREGNRRF 144
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ L +RA V + G+ AS + ++G P DE A+NRR +
Sbjct: 145 ADNWELSAQRALTVTRALIDDGVPASSLFAAAFGSGQPVSSNADEQGRARNRRVEI 200
>gi|237800676|ref|ZP_04589137.1| OmpA family protein [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331023535|gb|EGI03592.1| OmpA family protein [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 446
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 53/149 (35%), Gaps = 7/149 (4%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
+ A + + L + ++ ++ ++ SV F S + Q
Sbjct: 302 AIVARSGFVAQTVQALKVQPTAQMPADYQALTRKADRLSVNFR--FAQGSARLDNKAQQD 359
Query: 69 LSNLGSWLEKHDC---DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
L + +L+ D + G D + L RA AV + G++ ++
Sbjct: 360 LKRVADYLKAQDKLDQHVTLVGFGDAKSDPARATLLSRLRAMAVRRELLKSGVTFR--EI 417
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G EMP +D KNRR V+++
Sbjct: 418 LGLGDEMPVANNDIDDGRIKNRRVEVWVQ 446
>gi|315182421|gb|ADT89334.1| outer membrane protein OmpA [Vibrio furnissii NCTC 11218]
Length = 316
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 40/117 (34%), Gaps = 3/117 (2%)
Query: 41 QEQFSSSVGDSVFFDTS---SYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNS 97
E + + F Y + + L+ GHAD GS
Sbjct: 199 AESIENMLSGQYAFHFGFDIHYEALDDVFVYSKVIDCISKDSRIKVLLVGHADNQGSNQY 258
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ AL LRRA + N V G+ ++ + + G P + KNRR + L
Sbjct: 259 NYALSLRRAVTISNILVELGVDPEQIVIEARGDSEPIANNAILEQRKKNRRVEMILS 315
>gi|299773261|gb|ADJ38705.1| outer membrane protein P5 [Haemophilus parasuis]
gi|299773267|gb|ADJ38708.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 367
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 52/123 (42%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + + G+ D +G +++ L
Sbjct: 241 AFSSDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 300
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 301 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQVQ 360
Query: 155 GCR 157
G +
Sbjct: 361 GSK 363
>gi|146281586|ref|YP_001171739.1| outer membrane protein [Pseudomonas stutzeri A1501]
gi|145569791|gb|ABP78897.1| probable outer membrane protein [Pseudomonas stutzeri A1501]
Length = 343
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 35/69 (50%)
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++GH+D G+R + L RRA AV Y +A G+ ++ V +G+ P V E
Sbjct: 253 NRIQLDGHSDNSGNRLVNRDLSRRRALAVQEYLIANGVPEQQITVRFHGERYPLVANSSE 312
Query: 141 DAYAKNRRA 149
AKNRR
Sbjct: 313 ANRAKNRRV 321
>gi|329755858|gb|AEC04326.1| outer membrane protein A [Pasteurella multocida]
Length = 348
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 10/121 (8%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRR 105
++ V F ++PA VL + + + + G+ D LGS ++ L RR
Sbjct: 228 TLNTDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSASVAVAGYTDRLGSDAYNLKLSQRR 287
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLKGC 156
A V NY VA+G++ + + T +G+ P A +RR + +KG
Sbjct: 288 ADTVANYLVAKGVAQNAISATGHGEANPVTGNKCDSVKGRKALIACLADDRRVEIPVKGN 347
Query: 157 R 157
+
Sbjct: 348 K 348
>gi|299773291|gb|ADJ38720.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 52/123 (42%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + + G+ D +G +++ L
Sbjct: 239 AFSSDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 298
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 299 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQVQ 358
Query: 155 GCR 157
G +
Sbjct: 359 GSK 361
>gi|299773253|gb|ADJ38701.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 52/123 (42%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + + G+ D +G +++ L
Sbjct: 239 AFSSDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 298
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 299 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQVQ 358
Query: 155 GCR 157
G +
Sbjct: 359 GSK 361
>gi|224714311|gb|ACN62150.1| outer membrane protein A [Haemophilus parasuis]
Length = 367
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 52/123 (42%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + + G+ D +G +++ L
Sbjct: 241 AFSSDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 300
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 301 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQVQ 360
Query: 155 GCR 157
G +
Sbjct: 361 GSK 363
>gi|209968936|gb|ACJ02829.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968942|gb|ACJ02832.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968946|gb|ACJ02834.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968956|gb|ACJ02839.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968958|gb|ACJ02840.1| outer membrane protein P5 [Haemophilus parasuis]
gi|224714295|gb|ACN62142.1| outer membrane protein A [Haemophilus parasuis]
gi|312270743|gb|ADQ55772.1| OmpA [Haemophilus parasuis]
Length = 365
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 52/123 (42%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + + G+ D +G +++ L
Sbjct: 239 AFSSDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 298
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 299 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQVQ 358
Query: 155 GCR 157
G +
Sbjct: 359 GSK 361
>gi|254474524|ref|ZP_05087910.1| OmpA family protein [Ruegeria sp. R11]
gi|214028767|gb|EEB69602.1| OmpA family protein [Ruegeria sp. R11]
Length = 185
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 4/100 (4%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FF T+ + I A + L + + F+I GH D S ++ L RRA AV
Sbjct: 87 FFATNKHRISAAGQKRLQE--FFQSANASAFIITGHTDSRASDEYNMRLSQRRANAVAEV 144
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ + A ++ YG+ P V A+NRR +
Sbjct: 145 GES--VGARILEARGYGERDPRVPNDSASNMAQNRRVEII 182
>gi|312270741|gb|ADQ55771.1| OmpA [Haemophilus parasuis]
Length = 365
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 52/123 (42%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + + G+ D +G +++ L
Sbjct: 239 AFSSDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 298
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 299 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQVQ 358
Query: 155 GCR 157
G +
Sbjct: 359 GSK 361
>gi|302184719|ref|ZP_07261392.1| OmpA/MotB [Pseudomonas syringae pv. syringae 642]
Length = 300
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++GH+D G+R ++ L RRA AV +YF A+GI ++ + +G+ P +E
Sbjct: 207 NRIELDGHSDNSGNRLTNRDLSRRRALAVMDYFKAQGIPEQQITLRFHGERYPLAPNTNE 266
Query: 141 DAYAKNRRAIVFLK 154
A+NRR V L+
Sbjct: 267 ANRARNRRVSVHLE 280
>gi|148980294|ref|ZP_01815981.1| putative sodium-type flagellar protein MotY precursor [Vibrionales
bacterium SWAT-3]
gi|145961313|gb|EDK26623.1| putative sodium-type flagellar protein MotY precursor [Vibrionales
bacterium SWAT-3]
Length = 299
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 33/73 (45%)
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
LI+G+ D G +++ L +R V +F+ G+S +++ +G P +
Sbjct: 224 IKILIDGYTDNSGDSVANLQLSKQRGSDVAQWFMGNGVSKQMIEIRGHGDRYPKYDNTTQ 283
Query: 141 DAYAKNRRAIVFL 153
KNRR + L
Sbjct: 284 QGRDKNRRVEIRL 296
>gi|114570660|ref|YP_757340.1| OmpA/MotB domain-containing protein [Maricaulis maris MCS10]
gi|114341122|gb|ABI66402.1| OmpA/MotB domain protein [Maricaulis maris MCS10]
Length = 304
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 50/142 (35%), Gaps = 3/142 (2%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL 72
T + I D +D + S + L V D + F S + P L+ L
Sbjct: 162 TTSIVIVETDEMDRGMVSISAEALAAGLDADGHVRV-DGLLFAHDSDVLLPDSATALTAL 220
Query: 73 GSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGK 130
E+ + GH D GS +++L RRA +V V GI R+ G
Sbjct: 221 RDLLTERPSLTLYVVGHTDMSGSLTYNMSLSERRAASVVTALVEDYGIRMDRLTAAGVGP 280
Query: 131 EMPSVYGHDEDAYAKNRRAIVF 152
P +D NRR +
Sbjct: 281 LAPEASNGTDDGRTLNRRVEIV 302
>gi|330985312|gb|EGH83415.1| OmpA family protein [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 447
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 51/149 (34%), Gaps = 7/149 (4%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
+ A + + L + ++ + + + + + F S + Q
Sbjct: 303 AIVAQSGFVAQTVQALKVQPTAQMPA--DYQALARKAERLSVNFRFAQGSARLDNKAQQD 360
Query: 69 LSNLGSWLEKHDC---DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
L + +L+ D + G D + L RA AV + G++ +
Sbjct: 361 LKRVAEYLKTSDKLNQHVTLVGFGDAKSDPARAALLSRLRAMAVRRELLKSGVTFRDI-- 418
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G EMP +D KNRR V+++
Sbjct: 419 VGLGDEMPVATNEIDDGRIKNRRVEVWVQ 447
>gi|312897410|ref|ZP_07756834.1| OmpA family protein [Megasphaera micronuciformis F0359]
gi|310621471|gb|EFQ05007.1| OmpA family protein [Megasphaera micronuciformis F0359]
Length = 397
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 50/135 (37%), Gaps = 9/135 (6%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGD--------SVFFDTSSYSI-RPADIQVLSNLGSWLE 77
K ++P V+ E ++ G SV F + ++ + E
Sbjct: 260 KKAAPAPVVAEQPRRQVVQEQPGHVYNDYYLESVHFAFDVDTPIAYDQGKLDHFVAVAKE 319
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
F + G+ D G+ + L RR V Y V G++ +++++ GK P
Sbjct: 320 YPHDMFKLVGNTDARGTDAYNDDLSKRRVVNVARYAVDHGVNPEQLELSYEGKNDPVATN 379
Query: 138 HDEDAYAKNRRAIVF 152
+ A NRR ++
Sbjct: 380 ATDQGRADNRRVDIW 394
>gi|209546851|ref|YP_002278769.1| OmpA/MotB domain-containing protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209538095|gb|ACI58029.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 184
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/151 (19%), Positives = 56/151 (37%), Gaps = 8/151 (5%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESS-------LQEQFSSSVGDSVFFDTSSYSIRPA 64
+ ++ ++ + T +E F +VG ++F S ++
Sbjct: 28 GCSTTEVASLEEPTAAPMTGQTNDPAPGFENVAAGSEEDFILNVGRRIYFKQDSAALDSV 87
Query: 65 DIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
+ L N +W ++G AD+ GS + L +RA A Y ++G+ RM
Sbjct: 88 AMATLDNQANWLNRNPTWLLKLQGFADDSGSASKMETLSQKRADAAMAYLASKGVDTKRM 147
Query: 124 KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
YG + + +NRR + L+
Sbjct: 148 WAKGYGNDREVRDCTERSCKVQNRRVVTNLR 178
>gi|71734119|ref|YP_274824.1| OmpA family protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|71554672|gb|AAZ33883.1| OmpA family protein [Pseudomonas syringae pv. phaseolicola 1448A]
Length = 447
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 51/149 (34%), Gaps = 7/149 (4%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
+ A + + L + ++ + + + + + F S + Q
Sbjct: 303 AIVAQSGFVAQTVQALKVQPTAQMPA--DYQALARKAERLSVNFRFAQGSARLDNKAQQD 360
Query: 69 LSNLGSWLEKHDC---DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
L + +L+ D + G D + L RA AV + G++ +
Sbjct: 361 LKRVAEYLKTSDKLNQHVTLVGFGDAKSDPARAALLSRLRAMAVRRELLKSGVTFRDI-- 418
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G EMP +D KNRR V+++
Sbjct: 419 VGLGDEMPVATNEIDDGRIKNRRVEVWVQ 447
>gi|86144088|ref|ZP_01062426.1| OmpA family protein [Leeuwenhoekiella blandensis MED217]
gi|85829548|gb|EAQ48012.1| OmpA family protein [Leeuwenhoekiella blandensis MED217]
Length = 638
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 56/147 (38%), Gaps = 8/147 (5%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
++ I + T I + + + + ++FD +IRP L+ +
Sbjct: 491 LVEIPSESSEVTVILELEPAVTAIPPSFDLGKLI-NPIYFDFDKSNIRPDAAVELAKIIE 549
Query: 75 WLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEM 132
L+++ + H D G+ ++AL RR + +Y V G A R+ YG+
Sbjct: 550 ILKEYPELHIDVRSHTDSRGNDAYNLALSERRNQSTIDYIVEEGGIARERLSGRGYGETQ 609
Query: 133 PSVYGH-----DEDAYAKNRRAIVFLK 154
++ + NRR+ ++
Sbjct: 610 LLNECSNGVDCTKEQHQLNRRSEFIVQ 636
>gi|299773257|gb|ADJ38703.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 52/123 (42%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + + G+ D +G +++ L
Sbjct: 239 AFSSDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 298
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 299 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQVQ 358
Query: 155 GCR 157
G +
Sbjct: 359 GSK 361
>gi|167856409|ref|ZP_02479133.1| outer membrane protein P5 precursor [Haemophilus parasuis 29755]
gi|167852469|gb|EDS23759.1| outer membrane protein P5 precursor [Haemophilus parasuis 29755]
gi|209968896|gb|ACJ02809.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968900|gb|ACJ02811.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968904|gb|ACJ02813.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968916|gb|ACJ02819.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968932|gb|ACJ02827.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968960|gb|ACJ02841.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968964|gb|ACJ02843.1| outer membrane protein P5 [Haemophilus parasuis]
gi|222831781|gb|ACJ23250.2| OmpA [Haemophilus parasuis]
gi|224714297|gb|ACN62143.1| outer membrane protein A [Haemophilus parasuis]
gi|224714299|gb|ACN62144.1| outer membrane protein A [Haemophilus parasuis]
gi|224714301|gb|ACN62145.1| outer membrane protein A [Haemophilus parasuis]
gi|224714309|gb|ACN62149.1| outer membrane protein A [Haemophilus parasuis]
gi|224714313|gb|ACN62151.1| outer membrane protein A [Haemophilus parasuis]
gi|224714315|gb|ACN62152.1| outer membrane protein A [Haemophilus parasuis]
gi|224714323|gb|ACN62156.1| outer membrane protein A [Haemophilus parasuis]
gi|224714325|gb|ACN62157.1| outer membrane protein A [Haemophilus parasuis]
gi|224714327|gb|ACN62158.1| outer membrane protein A [Haemophilus parasuis]
gi|224714329|gb|ACN62159.1| outer membrane protein A [Haemophilus parasuis]
gi|224714331|gb|ACN62160.1| outer membrane protein A [Haemophilus parasuis]
gi|224714333|gb|ACN62161.1| outer membrane protein A [Haemophilus parasuis]
gi|299773239|gb|ADJ38694.1| outer membrane protein P5 [Haemophilus parasuis]
gi|299773269|gb|ADJ38709.1| outer membrane protein P5 [Haemophilus parasuis]
gi|312270735|gb|ADQ55768.1| OmpA [Haemophilus parasuis]
gi|312270737|gb|ADQ55769.1| OmpA [Haemophilus parasuis]
gi|312270739|gb|ADQ55770.1| OmpA [Haemophilus parasuis]
Length = 367
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 52/123 (42%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + + G+ D +G +++ L
Sbjct: 241 AFSSDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 300
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 301 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQVQ 360
Query: 155 GCR 157
G +
Sbjct: 361 GSK 363
>gi|332291441|ref|YP_004430050.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332169527|gb|AEE18782.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 649
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 41/112 (36%), Gaps = 7/112 (6%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
+ ++FD +IRP L + + + H D ++ L RR +
Sbjct: 536 NPIYFDFDKSNIRPDASLELEKVIAVMQQYPALKIDVRSHTDSRAPDAYNMKLSQRRNVS 595
Query: 109 VFNYFVARG-ISASRMKVTSYGKEMPSVYGH-----DEDAYAKNRRAIVFLK 154
Y V +G I A R+ YG+ + E+ + NRR+ +
Sbjct: 596 TIRYIVQQGGIEAYRLTGRGYGETQLTNACANGIECTEEEHQLNRRSEFIIM 647
>gi|320324614|gb|EFW80691.1| OmpA family protein [Pseudomonas syringae pv. glycinea str. B076]
Length = 447
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 51/149 (34%), Gaps = 7/149 (4%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
+ A + + L + ++ + + + + + F S + Q
Sbjct: 303 AIVAQSGFVAQTVQALKVQPTAQMPA--DYQALARKAERLSVNFRFAQGSARLDNKAQQD 360
Query: 69 LSNLGSWLEKHDC---DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
L + +L+ D + G D + L RA AV + G++ +
Sbjct: 361 LKRVAEYLKTSDKLNQHVTLVGFGDAKSDPARAALLSRLRAMAVRRELLKSGVTFRDI-- 418
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G EMP +D KNRR V+++
Sbjct: 419 VGLGDEMPVATNEIDDGRIKNRRVEVWVQ 447
>gi|312270725|gb|ADQ55763.1| OmpA [Haemophilus parasuis]
Length = 365
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 52/123 (42%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + + G+ D +G +++ L
Sbjct: 239 AFSSDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 298
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 299 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQVQ 358
Query: 155 GCR 157
G +
Sbjct: 359 GSK 361
>gi|303256827|ref|ZP_07342841.1| outer membrane protein A (Outer membrane protein II)
[Burkholderiales bacterium 1_1_47]
gi|302860318|gb|EFL83395.1| outer membrane protein A (Outer membrane protein II)
[Burkholderiales bacterium 1_1_47]
Length = 221
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 41/209 (19%), Positives = 68/209 (32%), Gaps = 52/209 (24%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFS--------------- 45
M T F +L A ++ SG ++P +L F
Sbjct: 11 MNTKTKFGMLIASVALAASGAVCAADAPANPYVQAAGQTLMTNFGLCVRTGYWTPALAEA 70
Query: 46 -----------------------SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD 82
++ F + ++P I L+ L S + D
Sbjct: 71 QGALGQNCQCDTDIIKCEAGAERVTLSADTLFAFNKAVLKPEGIAKLTELTSRMSGLTLD 130
Query: 83 FL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE- 140
+ I G+AD +G + L RRA AV + G+ A+R+ G+ P V +
Sbjct: 131 VVMINGYADRIGGAAYNQKLSQRRADAVKTFLAEHGVPAARIHAEGKGQADPVVNCPNPS 190
Query: 141 ------------DAYAKNRRAIVFLKGCR 157
+ NRRA++ +KG R
Sbjct: 191 AKGEIKTFKQLIECLQPNRRAVIEVKGTR 219
>gi|163787730|ref|ZP_02182177.1| hypothetical protein FBALC1_04287 [Flavobacteriales bacterium
ALC-1]
gi|159877618|gb|EDP71675.1| hypothetical protein FBALC1_04287 [Flavobacteriales bacterium
ALC-1]
Length = 366
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 56/122 (45%), Gaps = 6/122 (4%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRN 96
+ + ++ ++++ S + PA +V+ L + L + I H D G+ +
Sbjct: 242 EEVDCELLNATPIPIYYELGSARLTPASKKVIDERLLTILNDKPVNIEIMSHTDSRGNDD 301
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD-----EDAYAKNRRAIV 151
+ +L +RA +V NY V++GIS SR+ YG+ + + E + +NRR
Sbjct: 302 FNQSLSQQRANSVVNYLVSKGISRSRLSAKGYGETRLTNRCTNGADCSETQHQRNRRTEF 361
Query: 152 FL 153
+
Sbjct: 362 RV 363
>gi|46397579|gb|AAS91718.1| OmpA [Bibersteinia trehalosi]
gi|46397584|gb|AAS91722.1| OmpA [Bibersteinia trehalosi]
gi|46397589|gb|AAS91726.1| OmpA [Bibersteinia trehalosi]
gi|46397594|gb|AAS91730.1| OmpA [Bibersteinia trehalosi]
Length = 360
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/152 (19%), Positives = 56/152 (36%), Gaps = 12/152 (7%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
IS + T + + V FD +++ A Q L + ++
Sbjct: 205 ISSVSAGLTYRFGQGAAPVAEPEIVTKNFAFSSDVLFDFGKANLKSAAKQSLDAAHAEIQ 264
Query: 78 KHDCD---FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
+ G+ D +G ++AL RRA +V NY V++G++ + YGK P
Sbjct: 265 NLGLATPAIQVNGYTDRIGKDAPNLALSQRRAESVANYMVSKGVAPESITAVGYGKANPV 324
Query: 135 VYGHDE---------DAYAKNRRAIVFLKGCR 157
+ A +RR + ++G +
Sbjct: 325 TGNTCDAVKGRKALIACLAPDRRVELQVQGSK 356
>gi|87119461|ref|ZP_01075358.1| flagellar motor protein [Marinomonas sp. MED121]
gi|86164937|gb|EAQ66205.1| flagellar motor protein [Marinomonas sp. MED121]
Length = 281
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 48/114 (42%), Gaps = 4/114 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD----ELGSRNSSI 99
+ + F + + + + VL ++ L+++ ++EGH D S+
Sbjct: 154 IEIELKAGLLFSSGEFELTNEAVAVLMSISEVLKRYSYPIVVEGHTDNLPVSSNKYTSNW 213
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V + V GI+ + V E P V ++ + A+NRR + +
Sbjct: 214 QLSSARASSVVDELVNGGINPQLIAVLGLSSEKPKVRNSNDFSRARNRRVTLKI 267
>gi|332669626|ref|YP_004452634.1| OmpA/MotB domain-containing protein [Cellulomonas fimi ATCC 484]
gi|332338664|gb|AEE45247.1| OmpA/MotB domain protein [Cellulomonas fimi ATCC 484]
Length = 517
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 47/131 (35%), Gaps = 2/131 (1%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DF 83
+ + E + V V F S + P L+ + + +
Sbjct: 205 EAYTEVVGGTVRARQTPEAVTVQVASDVLFAVDSDLLGPEAEAALAAAAAQVTAYPGGTL 264
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDA 142
+ GH D++ ++ L RRA V +S + V + G+ P+V G DA
Sbjct: 265 TVVGHTDDVADDAYNLDLSQRRAATVAARLAQVADLSGFDVTVDAKGESQPAVAGTSPDA 324
Query: 143 YAKNRRAIVFL 153
A NRR + L
Sbjct: 325 RALNRRVEIVL 335
>gi|303249271|ref|ZP_07335504.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ]
gi|302489310|gb|EFL49266.1| OmpA/MotB domain protein [Desulfovibrio fructosovorans JJ]
Length = 264
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 38/114 (33%), Gaps = 4/114 (3%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG---SRNSSI 99
V +SV F S + P +VL + L + + G AD+ S
Sbjct: 135 GVMMQVNNSVMFRPGSAELTPTAQKVLDGVAKILRDFKINLTVRGFADDDEKGGPYPSKW 194
Query: 100 ALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
L RA A Y ++ R++ P V A+NRR F
Sbjct: 195 ELSAARAAAATRYLAETTGISTTRLRAVGLADSQPLVPPTSPANKARNRRIEFF 248
>gi|149372159|ref|ZP_01891429.1| putative flagellar motor protein MotB [unidentified eubacterium
SCB49]
gi|149354926|gb|EDM43488.1| putative flagellar motor protein MotB [unidentified eubacterium
SCB49]
Length = 287
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 62/146 (42%), Gaps = 8/146 (5%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+++ + ++ D +N S+ D V F + SY++ ++L +
Sbjct: 121 VTLALVSSLKKEVGMNDQDIQINVEKGV--VFISLSDKVLFKSGSYNLSTRANEILGKVA 178
Query: 74 SWLE-KHDCDFLIEGHADELGSR-----NSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
+ + K D + L+EGH D + ++ L +RA AV ++ G + S++
Sbjct: 179 TVINGKPDFEALVEGHTDNVPYNGGGVLIDNLDLSAKRATAVVRQLISLGANPSQLIAAG 238
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFL 153
G+ +P V + NRR +++
Sbjct: 239 RGEFVPLVPNTSVENKTLNRRTKIYI 264
>gi|242277509|ref|YP_002989638.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
gi|242120403|gb|ACS78099.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
Length = 241
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 10/123 (8%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RN 96
+ + + FF + + +VL + L K ++EGH+D +
Sbjct: 113 PDSVAIVLKGGFFFPSGQADLTSGARRVLGKIAPTLAKSPYQVVVEGHSDNIPIRSKQFP 172
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA------KNRRAI 150
S+ L RA AV Y + G S R+KV P+ D++ A +NRR +
Sbjct: 173 SNWELSSARASAVARYLLDNGFSKDRIKVLGMADTAPAYPNEDDNGNAIPANQKRNRRVV 232
Query: 151 VFL 153
+ +
Sbjct: 233 LLV 235
>gi|153830883|ref|ZP_01983550.1| putative outer membrane protein [Vibrio cholerae 623-39]
gi|148873634|gb|EDL71769.1| putative outer membrane protein [Vibrio cholerae 623-39]
Length = 212
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVF 110
+ F S SI PA + + + +L+ + ++G+A ++GS ++AL +R+ AV
Sbjct: 91 ILFANDSSSIEPAFLTQIRQMAEFLQTYPSTSIELQGYASKVGSAEHNLALSKQRSEAVR 150
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
+ + G++ R+ + YG + V G D+ ++A+NRR + G +
Sbjct: 151 DQLLRYGVAPERVNIVGYGDSVLEVEGTDDVSHARNRRVTATVVGYKG 198
>gi|85708814|ref|ZP_01039880.1| peptidoglycan-associated protein [Erythrobacter sp. NAP1]
gi|85690348|gb|EAQ30351.1| peptidoglycan-associated protein [Erythrobacter sp. NAP1]
Length = 378
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
VFFD +I +L N + ++ ++ GH D GS + ++AL RR
Sbjct: 267 PYIVFFDFDESAITADAATILDNAITAYANCGMARVMLAGHTDRSGSVSYNMALAERRNM 326
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+V Y RGI A+R+ ++G+ P V D +NRR V
Sbjct: 327 SVMEYMTGRGIPAARIMGEAFGESQPRVPTADGVRELQNRRVEVT 371
>gi|238792361|ref|ZP_04635995.1| Outer membrane protein A [Yersinia intermedia ATCC 29909]
gi|238728287|gb|EEQ19807.1| Outer membrane protein A [Yersinia intermedia ATCC 29909]
Length = 358
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 55/123 (44%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F + +++P Q L L + ++ D ++ G AD +G ++AL
Sbjct: 228 TLKSDVLFAFNKATLKPEGQQALDQLYAQLSSIDPKDGSVVVLGFADRIGQPAPNLALSQ 287
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHD-------EDAYAKNRRAIVFLK 154
RRA +V +Y V++GI A ++ G+ P + A +RR + +K
Sbjct: 288 RRADSVRDYLVSKGIPADKITARGEGQANPVTGSTCATVKPRAALIECLAPDRRVEIEVK 347
Query: 155 GCR 157
G +
Sbjct: 348 GYK 350
>gi|87201146|ref|YP_498403.1| OmpA/MotB [Novosphingobium aromaticivorans DSM 12444]
gi|87136827|gb|ABD27569.1| OmpA/MotB [Novosphingobium aromaticivorans DSM 12444]
Length = 357
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 1/105 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
VFFD I P +L N + ++ ++ G+AD G+ + L RR
Sbjct: 246 PYIVFFDWDKSDITPEAATILDNAITAYGNCASVPIMLAGYADRSGTVKYNQGLSERRNA 305
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+V +Y G+ + ++G+ P V D +NRR +
Sbjct: 306 SVRSYLTTHGVPDGSITSQAFGESNPRVPTADGVRELQNRRVEIT 350
>gi|84516634|ref|ZP_01003993.1| OmpA family protein [Loktanella vestfoldensis SKA53]
gi|84509670|gb|EAQ06128.1| OmpA family protein [Loktanella vestfoldensis SKA53]
Length = 218
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 11/154 (7%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQ-------FSSSVGDSVFFDTSSYSIRP 63
S+ + S ID D ++ + L ++ Q+ F++ V V F+ S +
Sbjct: 25 SSFFTEAGSEIDQGDFGNATMNNALVQTRQQDYTINLARRFNTEVDAMVNFEFDSAILDS 84
Query: 64 ADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASR 122
L W+ + F + GH D +GS + LGLRRA AV Y +GIS R
Sbjct: 85 LAQATLRQQADWIRQFPEVRFKVFGHTDLVGSAEYNRNLGLRRAQAVVGYLSTQGISRDR 144
Query: 123 MKVT-SYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
++ S+G P + + +NRR + + G
Sbjct: 145 LEAVVSFGATQPLIP--TPEPERRNRRTVTEVSG 176
>gi|127511243|ref|YP_001092440.1| OmpA/MotB domain-containing protein [Shewanella loihica PV-4]
gi|126636538|gb|ABO22181.1| OmpA/MotB domain protein [Shewanella loihica PV-4]
Length = 201
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 2/108 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAV 109
+ F SY I P + + +++ ++ IEGH + GS ++AL RA AV
Sbjct: 76 KILFANDSYYIDPQYYDQVEVVATFMRQYPNTKVTIEGHCSKTGSYEHNLALSQNRADAV 135
Query: 110 FNYFVARGIS-ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
+ R + R+ Y + P H + A+ +NRR I + G
Sbjct: 136 TSLLSERFGIASDRLTAIGYSYDRPVDPTHTKMAHTRNRRVIAEVTGE 183
>gi|294140499|ref|YP_003556477.1| OmpA family protein [Shewanella violacea DSS12]
gi|293326968|dbj|BAJ01699.1| OmpA family protein [Shewanella violacea DSS12]
Length = 197
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 63/166 (37%), Gaps = 15/166 (9%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNE-------------SSLQEQFSSS 47
MQ T ++++ +++++ S + + +N L
Sbjct: 29 MQ-KTALVLITGLSLVACSTQTYVSEENLDKFAGINVEKFLIAEIVTEIKQILPPNKKVF 87
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
+ FD S ++ D L L + + D +I+GH D GS + L +RRA
Sbjct: 88 ISLISHFDFDSSLLKDEDKMELDKLIALVNSLDGKLVIKGHTDYQGSNAYNENLSMRRAR 147
Query: 108 AVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ +Y + V +G+ P + H A A NRRA+V
Sbjct: 148 TIQDYLEGQLTQGEYEYSVEHFGELQPIIESHTLQANALNRRAMVI 193
>gi|242280858|ref|YP_002992987.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
gi|242123752|gb|ACS81448.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
Length = 250
Score = 61.0 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 51/130 (39%), Gaps = 5/130 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ ++ ++ Q+ V F + I P +L + S ++K D + ++
Sbjct: 112 SAGKMEKLMAVNTDQQGVLVRVPTRAIFKPGTAQINPKATVLLDKVASIMKKKDFNLVVR 171
Query: 87 GHADELGSRNS----SIALGLRRAYAVFNY-FVARGISASRMKVTSYGKEMPSVYGHDED 141
GH D+ ++N+ + L RA + Y G+S+ R+K Y P V
Sbjct: 172 GHTDDRATKNNIYSSNWELSAARAASCLRYILKKSGVSSKRLKAVGYAGTKPLVPNTSNR 231
Query: 142 AYAKNRRAIV 151
A NRR
Sbjct: 232 NRAINRRVEF 241
>gi|303231313|ref|ZP_07318049.1| OmpA family protein [Veillonella atypica ACS-049-V-Sch6]
gi|302514043|gb|EFL56049.1| OmpA family protein [Veillonella atypica ACS-049-V-Sch6]
Length = 339
Score = 61.0 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 1/105 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYA 108
S++FD+ R L + ++ + G+AD + +I L RR
Sbjct: 233 QSIYFDSDQDVPRADQGANLQAALNAANQYKNDQVKLLGNADTDANPQYNIGLSERRVQD 292
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V Y V G+ A+R+ + G P + A+NRR VF+
Sbjct: 293 VAQYLVNNGVDANRLIGIANGDAKPVATNATANGKAENRRVDVFI 337
>gi|299773263|gb|ADJ38706.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 367
Score = 61.0 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 52/123 (42%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + + G+ D +G +++ L
Sbjct: 241 AFSSDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 300
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 301 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQVQ 360
Query: 155 GCR 157
G +
Sbjct: 361 GSK 363
>gi|71909306|ref|YP_286893.1| OmpA/MotB [Dechloromonas aromatica RCB]
gi|71848927|gb|AAZ48423.1| OmpA/MotB [Dechloromonas aromatica RCB]
Length = 188
Score = 61.0 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 1/112 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIA 100
+ SV+FD +S I+ L + E + +EG+ADE GS +
Sbjct: 72 DPVGLRTQRSVYFDLNSADIKADYDPALRAHARYLAEHPNARVRVEGNADERGSSEHNRR 131
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
LGL+RA V + ++ G + ++ + + G+ P + GHDE ++++NRRA V
Sbjct: 132 LGLKRAENVRSAMLSNGAAEKQIAIKTLGEARPKLVGHDEASWSENRRADVI 183
>gi|89072281|ref|ZP_01158860.1| putative sodium-type flagellar protein MotY precursor
[Photobacterium sp. SKA34]
gi|89051813|gb|EAR57265.1| putative sodium-type flagellar protein MotY precursor
[Photobacterium sp. SKA34]
Length = 250
Score = 61.0 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNSSIALGLRRAYAVFN 111
F + + ++L++L S+L+ LI+GH D +GS +++ + RA V +
Sbjct: 137 FRLGQRVVSSSQNEILADLASYLKYDKNVKRVLIDGHTDNVGSNVTNLQISKVRADDVAS 196
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
G+ +S M++ S+G P + +D AKNRR +
Sbjct: 197 ILRENGVRSSLMEIRSHGSRYPVANNNTQDGKAKNRRVTI 236
>gi|161830197|ref|YP_001597454.1| ompA family protein [Coxiella burnetii RSA 331]
gi|164685809|ref|ZP_01945857.2| ompA family protein [Coxiella burnetii 'MSU Goat Q177']
gi|165919482|ref|ZP_02219502.1| ompA family protein [Coxiella burnetii RSA 334]
gi|161762064|gb|ABX77706.1| ompA family protein [Coxiella burnetii RSA 331]
gi|164601325|gb|EAX33525.2| ompA family protein [Coxiella burnetii 'MSU Goat Q177']
gi|165916897|gb|EDR35501.1| ompA family protein [Coxiella burnetii RSA 334]
Length = 170
Score = 61.0 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 44/125 (35%), Gaps = 1/125 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHA 89
+ L E + F S ++R L L ++ +D + + +
Sbjct: 37 QADGVQVIKLGETMRFVLLSDCLFKPDSANLRSDYRPTLKALARLMKTYDKVNVQVAAYT 96
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G AL R+A V ++ +RGI+A Y ++ P Y NRR
Sbjct: 97 DNNGHIERQQALTTRQAQVVASFLWSRGINARLAYAVGYNRKNPVDYNGSSHGRFNNRRV 156
Query: 150 IVFLK 154
+ +
Sbjct: 157 EISFR 161
>gi|299773255|gb|ADJ38702.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 367
Score = 61.0 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 52/123 (42%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + + G+ D +G +++ L
Sbjct: 241 AFSSDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 300
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 301 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKAIITCLAPDRRVEIQVQ 360
Query: 155 GCR 157
G +
Sbjct: 361 GSK 363
>gi|260221771|emb|CBA30668.1| hypothetical protein Csp_C24700 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 214
Score = 61.0 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 46/115 (40%), Gaps = 10/115 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH----DCDFLIEGHADE------LGSR 95
+ SV F +S +R Q+L +L L+ + D ++ G D
Sbjct: 87 IGISGSVLFAVNSDQLRADGRQLLKSLVPPLQVYLGERDEMLMVSGFTDNVAVSGANRHF 146
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
++ L +R+ V + G+ ASR+ ++G + P +E A NRR
Sbjct: 147 ADNLELSAQRSLTVTRALIEEGMPASRVFAAAFGAQQPVASNQNESGRALNRRVE 201
>gi|254463781|ref|ZP_05077192.1| OmpA domain protein [Rhodobacterales bacterium Y4I]
gi|206684689|gb|EDZ45171.1| OmpA domain protein [Rhodobacterales bacterium Y4I]
Length = 310
Score = 61.0 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 48/129 (37%), Gaps = 2/129 (1%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLI 85
P + + + + +V + F++ S +R L L + + L+
Sbjct: 179 SPERPVRPVELAKVLDVRGHAVLADLVFESGSTRLREGRYDSLVQLAEYLAANPEYRLLL 238
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFV-ARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
GH D +GS+ + + RRA +V + A G S++ V G P +
Sbjct: 239 VGHTDTVGSQEQNAGISERRAQSVKERLIEAYGAEESQIGVAGAGFLAPIASNLTPEGRE 298
Query: 145 KNRRAIVFL 153
NRR L
Sbjct: 299 ANRRVEAVL 307
>gi|126173289|ref|YP_001049438.1| OmpA/MotB domain-containing protein [Shewanella baltica OS155]
gi|125996494|gb|ABN60569.1| OmpA/MotB domain protein [Shewanella baltica OS155]
Length = 363
Score = 61.0 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 2/104 (1%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+ F S ++ + + L ++ + + I GHA +G ++ L +RA AV
Sbjct: 250 IQFANDSAVVKKVFYKDIERLANYLNKNPEFTVEIAGHASNVGKPEYNMVLSDKRADAVA 309
Query: 111 NYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V + + +R+ YG P V G ++AYA NRR +
Sbjct: 310 QILVEKYGISKNRVTSNGYGVTQPLVAGDSKEAYAANRRIEAIV 353
>gi|82523947|emb|CAI78669.1| OmpA protein [uncultured delta proteobacterium]
Length = 408
Score = 61.0 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 49/132 (37%), Gaps = 1/132 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ + +++P + S + F + ++ A + L + ++
Sbjct: 273 EKKEVPVATPALKAESEQTAPASAGSSTLVLHFGMNELAMNEAALAELKVFYNKVKDASG 332
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDE 140
+IEGH D G +++ L RA + + G ++++ G P + +
Sbjct: 333 KIVIEGHTDGHGDSAANLKASLERAVNTWRKLQSMGLSDKIKVELRGVGGSKPVADNNTQ 392
Query: 141 DAYAKNRRAIVF 152
+ KNRR +
Sbjct: 393 EGRDKNRRVELT 404
>gi|42524036|ref|NP_969416.1| outer membrane protein [Bdellovibrio bacteriovorus HD100]
gi|39576244|emb|CAE80409.1| probable outer membrane protein [Bdellovibrio bacteriovorus HD100]
Length = 440
Score = 61.0 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGH 138
+IEGH D +GS ++ L +RA +V N+ V++G +++ G + P +
Sbjct: 363 PKKVIIEGHTDNVGSAEANRILSEKRAQSVENFLVSQGTLPAEKVESVGMGYDNPVGNNN 422
Query: 139 DEDAYAKNRRAIVFLK 154
A+NRR + ++
Sbjct: 423 TAAGRAQNRRIDLVIE 438
>gi|284036230|ref|YP_003386160.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
gi|283815523|gb|ADB37361.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
Length = 757
Score = 61.0 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 6/109 (5%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAV 109
++++D + + IR Q L ++ L+++ + H D + +I L RA A
Sbjct: 645 NIYYDLNKFFIRADAAQELDHVLEILKEYPQMQIELRSHTDSRATDTYNIRLSESRARAA 704
Query: 110 FNYFVARGISASRMKVTSYGKEMPSV-----YGHDEDAYAKNRRAIVFL 153
+Y VARGISASR+ YG+ E + +NRR +
Sbjct: 705 MDYLVARGISASRLIARGYGESEIINGCIDGVNCTEGEHQQNRRTEFKI 753
>gi|206895822|ref|YP_002246694.1| OmpA family protein [Coprothermobacter proteolyticus DSM 5265]
gi|206738439|gb|ACI17517.1| OmpA family protein [Coprothermobacter proteolyticus DSM 5265]
Length = 237
Score = 61.0 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 48/138 (34%), Gaps = 7/138 (5%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS---WLEKHD 80
+ + + + + F S SIRP Q+LS L +K
Sbjct: 98 KSIQQQYGSEAIEVIEGVNEVRVRISGDLLFMPCSASIRPETSQILSALAPELVKAQKEG 157
Query: 81 CDFLIEGHA----DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
IEGHA + RA V F + G+ S+M + YG +P
Sbjct: 158 YRVYIEGHAAYTLSTCPGYIDDFHISSDRALNVLERFKSLGLDDSKMALVGYGDNVPVGD 217
Query: 137 GHDEDAYAKNRRAIVFLK 154
+ AKNRR + ++
Sbjct: 218 VNTPQGQAKNRRVEITIR 235
>gi|217978313|ref|YP_002362460.1| OmpA/MotB domain protein [Methylocella silvestris BL2]
gi|217503689|gb|ACK51098.1| OmpA/MotB domain protein [Methylocella silvestris BL2]
Length = 337
Score = 61.0 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 42/109 (38%), Gaps = 4/109 (3%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSIALGLR 104
+V + ++ ++GH D+ S+ +L
Sbjct: 226 SQAVLDTAGRAELDKLASALIELEHEIPPDIPWIIRVDGHTDKKPIQSSQYPSNWSLSAA 285
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA AV Y V++G+S R+ +G+ P G +DA +NRR + +
Sbjct: 286 RAIAVVQYLVSKGVSPQRLAAAGFGEFQPLDPGEGDDANRRNRRIELKI 334
>gi|209968962|gb|ACJ02842.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 61.0 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 52/123 (42%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + + G+ D +G +++ L
Sbjct: 239 AFSSDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 298
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 299 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQVQ 358
Query: 155 GCR 157
G +
Sbjct: 359 GSK 361
>gi|19881367|gb|AAM00926.1|AF491818_1 hemagglutinin antigen [Avibacterium paragallinarum]
gi|19881373|gb|AAM00929.1|AF491821_1 hemagglutinin antigen [Avibacterium paragallinarum]
gi|19881385|gb|AAM00935.1|AF491827_1 hemagglutinin antigen [Avibacterium paragallinarum]
Length = 341
Score = 61.0 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 10/120 (8%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRR 105
++ V F ++RP VL + + + + G+ D +GS +++ L RR
Sbjct: 221 ALNSDVTFAFGKANLRPEAQNVLDGIYGEIAQLKSVQVDLAGYTDRIGSEAANLKLSQRR 280
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLKGC 156
A V NY V++G++ + T YG+ P A +RR + +KG
Sbjct: 281 ADTVANYLVSKGVAQEVISSTGYGEANPVTGAKCDAVKGRKALIACLADDRRVEISVKGN 340
>gi|330503247|ref|YP_004380116.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
gi|328917533|gb|AEB58364.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
Length = 460
Score = 61.0 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 48/137 (35%), Gaps = 5/137 (3%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
K+++ + + Q + + + F S ++ + L + +L +H
Sbjct: 325 AQTVQAVKVATDPQMPTDYRQLAQQAQRLSVNFRFQEGSATLDNKAHRDLQRVLDYLRQH 384
Query: 80 ---DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
++ G D + L RA AV +G+ + G E+P
Sbjct: 385 DKLQNKVVLVGFGDPKNDPERAELLSKLRAMAVRRELAKQGVLFREIT--GLGSELPVAA 442
Query: 137 GHDEDAYAKNRRAIVFL 153
++ +NRR V++
Sbjct: 443 NDQDNGRIRNRRVEVWV 459
>gi|238757655|ref|ZP_04618839.1| Outer membrane protein A [Yersinia aldovae ATCC 35236]
gi|238704160|gb|EEP96693.1| Outer membrane protein A [Yersinia aldovae ATCC 35236]
Length = 350
Score = 61.0 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F + +++P Q L L S ++ D ++ G AD +G ++AL
Sbjct: 220 TLKSDVLFAFNKSNLKPEGQQALDQLYSQLSSIDPKDGSVVVLGFADRIGQPAPNLALSQ 279
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE---------DAYAKNRRAIVFLK 154
RRA +V +Y V++GI A ++ G+ P + D A +RR + +K
Sbjct: 280 RRADSVRDYLVSKGIPADKITARGEGQANPVTGNTCDNVKPRAALIDCLAPDRRVEIEVK 339
Query: 155 GCR 157
G +
Sbjct: 340 GYK 342
>gi|166712215|ref|ZP_02243422.1| hypothetical protein Xoryp_12360 [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 438
Score = 61.0 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 41/113 (36%), Gaps = 5/113 (4%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG----SRNSSIAL 101
+ + F + S + +L + + LE+ ++ GH D+ + AL
Sbjct: 322 VRLASASMFPSGSAELDADQTHLLERVAAALEQVPGRVVVVGHTDDQPVRSLRFKDNFAL 381
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV-YGHDEDAYAKNRRAIVFL 153
RRA +V A R++ + G P A+NRR + L
Sbjct: 382 SARRAESVGAVLAAGLRDRRRVQTSGAGDSQPIALPPQLPGNRARNRRVEILL 434
>gi|152985175|ref|YP_001347005.1| outer membrane protein [Pseudomonas aeruginosa PA7]
gi|150960333|gb|ABR82358.1| probable outer membrane protein [Pseudomonas aeruginosa PA7]
Length = 321
Score = 61.0 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 37/73 (50%)
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++GH+D G+R ++ L RRA AV Y G+ S++ V YG+ P V +
Sbjct: 207 NRIELDGHSDNSGNRLTNRDLSRRRALAVQEYLKGNGVPESQINVRFYGERYPLVANNSA 266
Query: 141 DAYAKNRRAIVFL 153
A+NRR V L
Sbjct: 267 ANRARNRRVTVHL 279
>gi|84501675|ref|ZP_00999847.1| OmpA family protein [Oceanicola batsensis HTCC2597]
gi|84390296|gb|EAQ02855.1| OmpA family protein [Oceanicola batsensis HTCC2597]
Length = 222
Score = 61.0 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 40/124 (32%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNS 97
L +F++ V SV F +S ++ Q+L+ W+ + + GH D +GS +
Sbjct: 64 DLANRFAAEVDSSVNFAFNSAALDATARQILARQAHWIRQFPEVRLRVYGHTDLVGSSSY 123
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVT-SYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
+ LGLRRA AV ++ VA+GIS SR++ S G+ P V + NRR + + G
Sbjct: 124 NYRLGLRRAQAVVHFLVAQGISRSRLEAVVSKGETQPLVVTQGRERR--NRRTVTEVNGF 181
Query: 157 RANT 160
AN+
Sbjct: 182 VANS 185
>gi|209968954|gb|ACJ02838.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 61.0 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 52/123 (42%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + + G+ D +G +++ L
Sbjct: 239 AFSSDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 298
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 299 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQVQ 358
Query: 155 GCR 157
G +
Sbjct: 359 GSK 361
>gi|330890787|gb|EGH23448.1| OmpA family protein [Pseudomonas syringae pv. mori str. 301020]
Length = 447
Score = 60.6 bits (145), Expect = 6e-08, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 51/149 (34%), Gaps = 7/149 (4%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
+ A + + L + ++ + + + + + F S + Q
Sbjct: 303 AIVAQSGFVAQTVQALKVQPTAQMPA--DYQALARKAERLSVNFRFAQGSARLDNKAQQD 360
Query: 69 LSNLGSWLEKHDC---DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
L + +L+ D + G D + L RA AV + G++ +
Sbjct: 361 LKRVAEYLKTSDKLNQHVTLVGFGDAKSDPARAALLSRLRAMAVRRELLKSGVTFRDI-- 418
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G EMP +D KNRR V+++
Sbjct: 419 VGLGDEMPVATNEIDDGRIKNRRVEVWVQ 447
>gi|83859947|ref|ZP_00953467.1| flagellar motor protein [Oceanicaulis alexandrii HTCC2633]
gi|83852306|gb|EAP90160.1| flagellar motor protein [Oceanicaulis alexandrii HTCC2633]
Length = 338
Score = 60.6 bits (145), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 13/116 (11%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGS--------WLEKHDCDFLIEGHADE-----LGSRNS 97
V F + S + + L+ + + D ++GH D S
Sbjct: 220 DVLFASGSAELSEEGRRSLAPIADAIIQLTDEIPDDLDWVLRVDGHTDRVPLGPNAPFES 279
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L R+ +V YF +RG+ R+ +G+ P G ++AYA+NRR + L
Sbjct: 280 NWELSTARSLSVIAYFESRGVPPRRLLAAGFGEHYPIAEGRTQEAYARNRRIELKL 335
>gi|325915795|ref|ZP_08178096.1| Type VI secretion system OmpA/MotB domain protein [Xanthomonas
vesicatoria ATCC 35937]
gi|325537992|gb|EGD09687.1| Type VI secretion system OmpA/MotB domain protein [Xanthomonas
vesicatoria ATCC 35937]
Length = 412
Score = 60.6 bits (145), Expect = 6e-08, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 43/125 (34%), Gaps = 5/125 (4%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG- 93
E Q + + F + + P +++ + + +++ ++ GH D++
Sbjct: 285 SVEEQADGQTRVRLSSAAMFASGGVEVEPEQRGLIAQIAAAIDQLPGRVIVVGHTDDVPV 344
Query: 94 ---SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV-YGHDEDAYAKNRRA 149
+ AL RA AV + R++ G P A+NRR
Sbjct: 345 RSLRFADNYALSGARAAAVAQLLRTHLATPGRVEALGAGDSQPVAQPVQLPANRARNRRV 404
Query: 150 IVFLK 154
+ +
Sbjct: 405 EILFQ 409
>gi|158523264|ref|YP_001531134.1| hypothetical protein Dole_3254 [Desulfococcus oleovorans Hxd3]
gi|158512090|gb|ABW69057.1| conserved repeat domain [Desulfococcus oleovorans Hxd3]
Length = 2118
Score = 60.6 bits (145), Expect = 6e-08, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 36/113 (31%), Gaps = 8/113 (7%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL-------GSRNSSIAL 101
+F + QV + S + ++ GH D + AL
Sbjct: 912 QRPLFASFGTQLTENDKEQVRALRQSLAGRRIKRIIVTGHTDNQPIRARSRHIFADNDAL 971
Query: 102 GLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V Y + R++ G P E A+NRR V +
Sbjct: 972 SLGRAQSVATYLQTILNLPPERIEAEGKGDREPVASNATEAGRAENRRVAVAV 1024
>gi|153003801|ref|YP_001378126.1| OmpA/MotB domain-containing protein [Anaeromyxobacter sp. Fw109-5]
gi|152027374|gb|ABS25142.1| OmpA/MotB domain protein [Anaeromyxobacter sp. Fw109-5]
Length = 171
Score = 60.6 bits (145), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 58/170 (34%), Gaps = 16/170 (9%)
Query: 1 MQYSTIFIILSAITMMSISGIDN-----LDTKISSPDTVLNESSLQEQFSSSVGDSVFFD 55
M++ ++ + + + S S+ L + + + F
Sbjct: 1 MRHLSVALAVLVLASASRVSAQTPWDAAKKAAGSATVGKLEKQINKRLLEEGRKNQCSFK 60
Query: 56 TSSYSIRPADIQVLSNLGSWLEK----------HDCDFLIEGHADELGSRNSSIALGLRR 105
T + + P + L + L + F++ GH D GS + AL +R
Sbjct: 61 TDTDELEPGCDAKMKRLANALVDAKKQLNGAGVQNFKFVVSGHTDSSGSAKHNDALSAKR 120
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSV-YGHDEDAYAKNRRAIVFLK 154
A V VA GI ++ G + P V AKNRR + +K
Sbjct: 121 AAVVERELVANGIPKDEIQSVGMGSKRPLVKPDDTPAKKAKNRRYELQVK 170
>gi|330998926|ref|ZP_08322653.1| putative outer membrane protein A [Parasutterella excrementihominis
YIT 11859]
gi|329576140|gb|EGG57659.1| putative outer membrane protein A [Parasutterella excrementihominis
YIT 11859]
Length = 212
Score = 60.6 bits (145), Expect = 6e-08, Method: Composition-based stats.
Identities = 41/209 (19%), Positives = 68/209 (32%), Gaps = 52/209 (24%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFS--------------- 45
M T F +L A ++ SG ++P +L F
Sbjct: 2 MNTKTKFGMLIASVALAASGAVCAADAPANPYVQAAGQTLMTNFGLCVRTGYWTPALAEA 61
Query: 46 -----------------------SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD 82
++ F + ++P I L+ L S + D
Sbjct: 62 QGALGQNCQCDTDIIKCEAGAERVTLSADTLFAFNKAVLKPEGIAKLTKLTSRMSGLTLD 121
Query: 83 FL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE- 140
+ I G+AD +G + L RRA AV + G+ A+R+ G+ P V +
Sbjct: 122 VVMINGYADRIGGAAYNQKLSQRRADAVKTFLAEHGVPAARIHAEGKGQADPVVNCPNPS 181
Query: 141 ------------DAYAKNRRAIVFLKGCR 157
+ NRRA++ +KG R
Sbjct: 182 AKGEIKTFKQLIECLQPNRRAVIEVKGTR 210
>gi|299773251|gb|ADJ38700.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 60.6 bits (145), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 52/123 (42%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + + G+ D +G +++ L
Sbjct: 239 AFSSDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 298
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 299 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQVQ 358
Query: 155 GCR 157
G +
Sbjct: 359 GSK 361
>gi|152984801|ref|YP_001349685.1| hypothetical protein PSPA7_4332 [Pseudomonas aeruginosa PA7]
gi|150959959|gb|ABR81984.1| probable outer membrane protein [Pseudomonas aeruginosa PA7]
Length = 293
Score = 60.6 bits (145), Expect = 6e-08, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 31/69 (44%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
L+ GH D GS+ + L RA +V F G+ ++++ G +MP
Sbjct: 210 ILVLGHTDSTGSKAVNDKLSFERAQSVAAIFRLSGLKGDQLRLKGVGSDMPRADNSSAAG 269
Query: 143 YAKNRRAIV 151
A+NRR V
Sbjct: 270 RAQNRRVEV 278
>gi|160874266|ref|YP_001553582.1| OmpA/MotB domain-containing protein [Shewanella baltica OS195]
gi|160859788|gb|ABX48322.1| OmpA/MotB domain protein [Shewanella baltica OS195]
gi|315266500|gb|ADT93353.1| OmpA/MotB domain protein [Shewanella baltica OS678]
Length = 369
Score = 60.6 bits (145), Expect = 6e-08, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 2/104 (1%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+ F S ++ + + L ++ + + I GHA +G ++ L +RA AV
Sbjct: 256 IQFANDSAVVKKVFYKDIERLANYLNKNPEFTVEIAGHASNVGKPEYNMVLSDKRADAVA 315
Query: 111 NYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V + + R+ YG P V G ++AYA NRR +
Sbjct: 316 QILVEKYGISQSRVTSNGYGVTQPLVAGDSKEAYAANRRIEAIV 359
>gi|15641629|ref|NP_231261.1| outer membrane protein, putative [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121591817|ref|ZP_01679004.1| outer membrane protein, putative [Vibrio cholerae 2740-80]
gi|121730010|ref|ZP_01682424.1| outer membrane protein, putative [Vibrio cholerae V52]
gi|147673877|ref|YP_001217173.1| putative outer membrane protein [Vibrio cholerae O395]
gi|153214683|ref|ZP_01949543.1| outer membrane protein, putative [Vibrio cholerae 1587]
gi|153802238|ref|ZP_01956824.1| outer membrane protein, putative [Vibrio cholerae MZO-3]
gi|153819367|ref|ZP_01972034.1| outer membrane protein, putative [Vibrio cholerae NCTC 8457]
gi|153822202|ref|ZP_01974869.1| outer membrane protein, putative [Vibrio cholerae B33]
gi|227081775|ref|YP_002810326.1| putative outer membrane protein [Vibrio cholerae M66-2]
gi|229508265|ref|ZP_04397770.1| outer membrane protein [Vibrio cholerae BX 330286]
gi|229511496|ref|ZP_04400975.1| outer membrane protein [Vibrio cholerae B33]
gi|229518635|ref|ZP_04408078.1| outer membrane protein [Vibrio cholerae RC9]
gi|229520779|ref|ZP_04410202.1| outer membrane protein [Vibrio cholerae TM 11079-80]
gi|229523717|ref|ZP_04413122.1| outer membrane protein [Vibrio cholerae bv. albensis VL426]
gi|229529345|ref|ZP_04418735.1| outer membrane protein [Vibrio cholerae 12129(1)]
gi|229607839|ref|YP_002878487.1| outer membrane protein [Vibrio cholerae MJ-1236]
gi|254226120|ref|ZP_04919717.1| outer membrane protein, putative [Vibrio cholerae V51]
gi|254285433|ref|ZP_04960398.1| outer membrane protein, putative [Vibrio cholerae AM-19226]
gi|254848742|ref|ZP_05238092.1| outer membrane protein [Vibrio cholerae MO10]
gi|255744948|ref|ZP_05418898.1| outer membrane protein [Vibrio cholera CIRS 101]
gi|262161767|ref|ZP_06030785.1| outer membrane protein [Vibrio cholerae INDRE 91/1]
gi|262169640|ref|ZP_06037331.1| outer membrane protein [Vibrio cholerae RC27]
gi|262189703|ref|ZP_06048070.1| outer membrane protein [Vibrio cholerae CT 5369-93]
gi|298498295|ref|ZP_07008102.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|9656135|gb|AAF94775.1| outer membrane protein, putative [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121546319|gb|EAX56596.1| outer membrane protein, putative [Vibrio cholerae 2740-80]
gi|121628244|gb|EAX60761.1| outer membrane protein, putative [Vibrio cholerae V52]
gi|124115205|gb|EAY34025.1| outer membrane protein, putative [Vibrio cholerae 1587]
gi|124122220|gb|EAY40963.1| outer membrane protein, putative [Vibrio cholerae MZO-3]
gi|125621355|gb|EAZ49692.1| outer membrane protein, putative [Vibrio cholerae V51]
gi|126510081|gb|EAZ72675.1| outer membrane protein, putative [Vibrio cholerae NCTC 8457]
gi|126520270|gb|EAZ77493.1| outer membrane protein, putative [Vibrio cholerae B33]
gi|146315760|gb|ABQ20299.1| putative outer membrane protein [Vibrio cholerae O395]
gi|150424705|gb|EDN16641.1| outer membrane protein, putative [Vibrio cholerae AM-19226]
gi|227009663|gb|ACP05875.1| putative outer membrane protein [Vibrio cholerae M66-2]
gi|227013531|gb|ACP09741.1| putative outer membrane protein [Vibrio cholerae O395]
gi|229333119|gb|EEN98605.1| outer membrane protein [Vibrio cholerae 12129(1)]
gi|229337298|gb|EEO02315.1| outer membrane protein [Vibrio cholerae bv. albensis VL426]
gi|229342334|gb|EEO07329.1| outer membrane protein [Vibrio cholerae TM 11079-80]
gi|229343324|gb|EEO08299.1| outer membrane protein [Vibrio cholerae RC9]
gi|229351461|gb|EEO16402.1| outer membrane protein [Vibrio cholerae B33]
gi|229355770|gb|EEO20691.1| outer membrane protein [Vibrio cholerae BX 330286]
gi|229370494|gb|ACQ60917.1| outer membrane protein [Vibrio cholerae MJ-1236]
gi|254844447|gb|EET22861.1| outer membrane protein [Vibrio cholerae MO10]
gi|255737419|gb|EET92814.1| outer membrane protein [Vibrio cholera CIRS 101]
gi|262021874|gb|EEY40584.1| outer membrane protein [Vibrio cholerae RC27]
gi|262028499|gb|EEY47154.1| outer membrane protein [Vibrio cholerae INDRE 91/1]
gi|262034416|gb|EEY52789.1| outer membrane protein [Vibrio cholerae CT 5369-93]
gi|297542628|gb|EFH78678.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|327484234|gb|AEA78641.1| outer membrane protein, putative [Vibrio cholerae LMA3894-4]
Length = 212
Score = 60.6 bits (145), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVF 110
+ F S SI PA + + + +L+ + ++G+A ++GS ++AL +R+ AV
Sbjct: 91 ILFANDSSSIEPAFLTQIRQMAEFLQTYPSTSIELQGYASKVGSAEHNLALSKQRSEAVR 150
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
+ + G++ R+ + YG + V G D+ ++A+NRR + G +
Sbjct: 151 DQLLRYGVAPERVNIVGYGDSVLEVEGTDDVSHARNRRVTATVVGYKG 198
>gi|320540573|ref|ZP_08040223.1| putative outer membrane protein A (3a;II*;G;d) [Serratia symbiotica
str. Tucson]
gi|320029504|gb|EFW11533.1| putative outer membrane protein A (3a;II*;G;d) [Serratia symbiotica
str. Tucson]
Length = 382
Score = 60.6 bits (145), Expect = 6e-08, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 57/141 (40%), Gaps = 14/141 (9%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDCDFLIEG 87
V + + E ++ V F+ + +++ Q L L + ++ D ++ G
Sbjct: 234 APVVSAPAPVVETKRFTLKSDVLFNFNKSTLKAECQQSLEQLYTQLSSMDPKDGSVIVLG 293
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP-----------SVY 136
+ D +GS + L +RA +V ++ +++GI + ++ GK
Sbjct: 294 YTDAVGSEQYNHKLSEKRAQSVVDFLISKGIPSDKISARGLGKADSTTGNTCGYKSGRAT 353
Query: 137 GHDEDAYAKNRRAIVFLKGCR 157
D A +RR + +KG +
Sbjct: 354 KAQIDCLAPDRRVEIEVKGIK 374
>gi|255534563|ref|YP_003094934.1| putative flagellar motor protein MotB [Flavobacteriaceae bacterium
3519-10]
gi|255340759|gb|ACU06872.1| putative flagellar motor protein MotB [Flavobacteriaceae bacterium
3519-10]
Length = 300
Score = 60.6 bits (145), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 50/131 (38%), Gaps = 7/131 (5%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHA 89
D + L+ S+ D + + T Y++ PA +VL + + +D LIEG+
Sbjct: 153 ADDDVQVKVLKGVVMISLSDKMLYKTGDYNVMPAAQEVLGKVAQVINDYDTYSVLIEGNT 212
Query: 90 DELGS-----RNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAY 143
D + + L RA ++ + ++ +R+ + P
Sbjct: 213 DNVPLSSANLPKDNWDLSALRATSMAKILQTKFGVNPARITAGGRSEYNPKTTNASVSGR 272
Query: 144 AKNRRAIVFLK 154
A+NRR + +
Sbjct: 273 AENRRTEIIIM 283
>gi|209968902|gb|ACJ02812.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968930|gb|ACJ02826.1| outer membrane protein P5 [Haemophilus parasuis]
gi|224714289|gb|ACN62139.1| outer membrane protein A [Haemophilus parasuis]
Length = 365
Score = 60.6 bits (145), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 52/123 (42%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + + G+ D +G +++ L
Sbjct: 239 AFSSDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 298
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 299 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQVQ 358
Query: 155 GCR 157
G +
Sbjct: 359 GSK 361
>gi|170692926|ref|ZP_02884087.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
gi|170141924|gb|EDT10091.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
Length = 218
Score = 60.6 bits (145), Expect = 6e-08, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 45/116 (38%), Gaps = 10/116 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLG----SWLEKHDCDFLIEGHADELG------SR 95
+ +V F +S ++P +L +L ++L D ++ G D+
Sbjct: 88 IGISGNVLFALNSDQLQPQGRDLLKSLAGPLSAYLRASDQILMVSGFTDDQRLREGNRRF 147
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ L +RA V + G+ A + ++G P DE A+NRR +
Sbjct: 148 ADNWELSAQRALTVTRALIEAGVPAPSLFAAAFGSGQPVSSNADEQGRARNRRVEI 203
>gi|157369997|ref|YP_001477986.1| outer membrane protein A [Serratia proteamaculans 568]
gi|157321761|gb|ABV40858.1| OmpA domain protein transmembrane region-containing protein
[Serratia proteamaculans 568]
Length = 358
Score = 60.6 bits (145), Expect = 6e-08, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 53/125 (42%), Gaps = 14/125 (11%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++ Q L L + ++ D ++ G+ D +GS + L
Sbjct: 226 TLKSDVLFNFNKSTLKAEGQQALDQLYTQLSAMDPKDGSAVVLGYTDAVGSDQYNQKLSE 285
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD--EDAY---------AKNRRAIVF 152
+RA +V +Y V++GI + ++ G+ + A +RR +
Sbjct: 286 KRAQSVVDYLVSKGIPSEKISARGMGEADSVTGNTCGYKAGRATKAQIACLAPDRRVEIE 345
Query: 153 LKGCR 157
+KG +
Sbjct: 346 VKGIK 350
>gi|83647008|ref|YP_435443.1| outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hahella chejuensis KCTC 2396]
gi|83635051|gb|ABC31018.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hahella chejuensis KCTC 2396]
Length = 493
Score = 60.6 bits (145), Expect = 6e-08, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 42/113 (37%), Gaps = 2/113 (1%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIA 100
++ ++ VFFDT ++ L + ++ + + GH D+ G+ +I
Sbjct: 377 DETGKALLYGVFFDTDKAVVKDESKPTLEAIAGLLKKRPELLLYVTGHTDDTGAFQHNIE 436
Query: 101 LGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
L RA AV + A R+ G P + +NRR +
Sbjct: 437 LSSARAKAVVERLIKDYGVAQARLTPYGVGPVAPEADNLSDAGKKRNRRVELI 489
>gi|269219690|ref|ZP_06163544.1| OmpA family protein [Actinomyces sp. oral taxon 848 str. F0332]
gi|269210932|gb|EEZ77272.1| OmpA family protein [Actinomyces sp. oral taxon 848 str. F0332]
Length = 212
Score = 60.6 bits (145), Expect = 6e-08, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 53/134 (39%), Gaps = 8/134 (5%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FL 84
I S D + + ++++ V F+ S ++ P +VL L S K
Sbjct: 78 APIGSADGAETTVEGEGKTTTTLSSDVNFEVDSANLTPRAREVLDGLVSKWRKKKPKEIS 137
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH------ 138
I GH D + + + L RA AV +Y + ++V G++ P+
Sbjct: 138 ITGHTDSVADDDHNQKLSEDRAKAVRSYVAPKVS-GVSIEVEGKGEKEPAASETNEDGSP 196
Query: 139 DEDAYAKNRRAIVF 152
+E A NRR ++
Sbjct: 197 NEAGKAANRRVVIV 210
>gi|153826170|ref|ZP_01978837.1| outer membrane protein, putative [Vibrio cholerae MZO-2]
gi|149740111|gb|EDM54276.1| outer membrane protein, putative [Vibrio cholerae MZO-2]
Length = 212
Score = 60.6 bits (145), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVF 110
+ F S SI PA + + + +L+ + ++G+A ++GS ++AL +R+ AV
Sbjct: 91 ILFANDSSSIEPAFLTQIRQMAEFLQTYPSTSIELQGYASKVGSAEHNLALSKQRSEAVR 150
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
+ + G++ R+ + YG + V G D+ ++A+NRR + G +
Sbjct: 151 DQLLRYGVAPERVNIVGYGDSVLEVEGTDDVSHARNRRVTATVVGYKG 198
>gi|167949297|ref|ZP_02536371.1| hypothetical protein Epers_23486 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 117
Score = 60.6 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 9/40 (22%), Positives = 15/40 (37%)
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ R+ YG++ P + AKNRR +
Sbjct: 9 CWSTAFKQDRLLARGYGEDHPVADNGTSEGRAKNRRVELI 48
>gi|304412567|ref|ZP_07394172.1| OmpA/MotB domain protein [Shewanella baltica OS183]
gi|307303583|ref|ZP_07583336.1| OmpA/MotB domain protein [Shewanella baltica BA175]
gi|304349043|gb|EFM13456.1| OmpA/MotB domain protein [Shewanella baltica OS183]
gi|306912481|gb|EFN42904.1| OmpA/MotB domain protein [Shewanella baltica BA175]
Length = 369
Score = 60.6 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 2/104 (1%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+ F S ++ + + L ++ + + I GHA +G ++ L +RA AV
Sbjct: 256 IQFANDSAVVKKVFYKDIERLANYLNKNPEFTVEIAGHASNVGKPEYNMVLSDKRADAVA 315
Query: 111 NYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V + + +R+ YG P V G ++AYA NRR +
Sbjct: 316 QILVEKYGISKNRVTSNGYGVTQPLVAGDSKEAYAANRRIEAIV 359
>gi|251792331|ref|YP_003007056.1| outer membrane protein A [Aggregatibacter aphrophilus NJ8700]
gi|247533723|gb|ACS96969.1| outer membrane protein A [Aggregatibacter aphrophilus NJ8700]
Length = 346
Score = 60.6 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 54/138 (39%), Gaps = 10/138 (7%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGH 88
+ + ++ V F +++P VL + S + + ++ D + G+
Sbjct: 209 GQGAAPAPAPEVVSKTFNLNSDVTFAFGKANLKPQAQSVLDGIYSEIAQVNNADIKVSGY 268
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY--- 143
D +GS + L RRA V NY V++G++ + + YGK P
Sbjct: 269 TDRIGSDAYNQKLSQRRAETVANYLVSKGVAQNAISAAGYGKANPVTGTKCDAVKGRKAL 328
Query: 144 ----AKNRRAIVFLKGCR 157
A +RR + + G +
Sbjct: 329 IACLADDRRVEIAVNGSK 346
>gi|323528476|ref|YP_004230628.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1001]
gi|323385478|gb|ADX57568.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1001]
Length = 217
Score = 60.6 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 47/116 (40%), Gaps = 10/116 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLG----SWLEKHDCDFLIEGHADELG------SR 95
+ +V F +S ++P +L +L ++L +D ++ G D+
Sbjct: 88 IGISGNVLFALNSDQLQPQGRDLLKSLAGPLSAYLRANDQLLMVSGFTDDQRLREGNRRF 147
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ L +RA V + G+ AS + ++G P DE A+NRR +
Sbjct: 148 ADNWELSAQRALTVTRALIDAGVPASSVFAAAFGSAQPVSSNADEQGRARNRRVEI 203
>gi|146306425|ref|YP_001186890.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp]
gi|145574626|gb|ABP84158.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp]
Length = 315
Score = 60.6 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 53/123 (43%), Gaps = 2/123 (1%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHAD 90
L F + F + L + +++ F I+GHAD
Sbjct: 162 QACTAKLLPVNFEQIRQAQIGFPGGGIELDAMAKAKLDIILDFVKADPSINSFQIDGHAD 221
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G+R ++ L RRA AV Y VA G+ A ++ V +G+ P V ++E AKNRRA
Sbjct: 222 NSGNRLTNRDLSRRRALAVQEYLVAGGVPAEQITVRFHGERYPLVPNNNEANRAKNRRAT 281
Query: 151 VFL 153
+ L
Sbjct: 282 LRL 284
>gi|26987823|ref|NP_743248.1| OmpA family outer membrane protein [Pseudomonas putida KT2440]
gi|24982522|gb|AAN66712.1|AE016299_8 outer membrane protein, OmpA family [Pseudomonas putida KT2440]
Length = 317
Score = 60.6 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNSSIALGLRRAYA 108
V F + A L + +++ + GH+D G+R ++ L RRA A
Sbjct: 180 QVGFPGGGIELDAAAKARLDVILDYMKADPTVNHVELNGHSDNSGNRLTNRDLSRRRALA 239
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V +YF A G+ ++ V +G+ P + A+NRR + L
Sbjct: 240 VADYFKANGVPEEQITVRFHGERYPLAKNNSASNRARNRRVNIEL 284
>gi|327479764|gb|AEA83074.1| outer membrane protein [Pseudomonas stutzeri DSM 4166]
Length = 297
Score = 60.6 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 35/69 (50%)
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++GH+D G+R + L RRA AV Y +A G+ ++ V +G+ P V E
Sbjct: 207 NRIQLDGHSDNSGNRLVNRDLSRRRALAVQEYLIANGVPEQQITVRFHGERYPLVANSSE 266
Query: 141 DAYAKNRRA 149
AKNRR
Sbjct: 267 ANRAKNRRV 275
>gi|254477082|ref|ZP_05090468.1| OmpA/MotB [Ruegeria sp. R11]
gi|214031325|gb|EEB72160.1| OmpA/MotB [Ruegeria sp. R11]
Length = 331
Score = 60.6 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 4/142 (2%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQE--QFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+ I+ D + P + + Q +V + F+T + + L L
Sbjct: 187 VVIAPDDTTEGPPPQPALIGEADLITRLTQSGHAVLGDLEFETGAVELGAKPYDSLVALS 246
Query: 74 SWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKE 131
S+L+ + + D L+ GH D +GS + +IA+ RRA AV + +R+ V G
Sbjct: 247 SFLQDNTEFDILLVGHTDTVGSLDQNIAISERRADAVRRRLLEDSTVDRARIAVAGAGYM 306
Query: 132 MPSVYGHDEDAYAKNRRAIVFL 153
P NRR V L
Sbjct: 307 APLTSNQTPAGREANRRVEVVL 328
>gi|163800131|ref|ZP_02194032.1| putative sodium-type flagellar protein MotY precursor [Vibrio sp.
AND4]
gi|159175574|gb|EDP60368.1| putative sodium-type flagellar protein MotY precursor [Vibrio sp.
AND4]
Length = 356
Score = 60.6 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 66/145 (45%), Gaps = 4/145 (2%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS 70
SAI+ +++ I + + E + +S + ++ F + + L+
Sbjct: 177 SAISSITLPTIQMQN--ALASFNQCREQLPELSYSQARNVNLPFQFGQKKLNASQQITLA 234
Query: 71 NLGSWL--EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L S++ ++ L++GH D +GS+ +++ + +RA V + +G+ S ++V ++
Sbjct: 235 ALYSYISVDERVTKILVDGHTDNVGSQLTNLTVSRQRAEQVAQALIQKGMDRSLIEVRAH 294
Query: 129 GKEMPSVYGHDEDAYAKNRRAIVFL 153
G P + AKNRR + L
Sbjct: 295 GSRYPIASNKTQLGQAKNRRVTLRL 319
>gi|116249010|ref|YP_764851.1| putative outer membrane protein [Rhizobium leguminosarum bv. viciae
3841]
gi|115253660|emb|CAK12053.1| putative outer membrane protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 184
Score = 60.6 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 55/134 (41%), Gaps = 1/134 (0%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-L 76
+ T +P + +E F +VG ++F S ++ + L N +W
Sbjct: 41 AAAPMTGQTNDPAPGFETVAAGSEEDFILNVGRRIYFAQDSATLDSVAMATLDNQAAWLS 100
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ ++G AD+ GS +S L +RA A Y ++G+ A RM YG +
Sbjct: 101 KNPTWLLKLQGFADDSGSASSMETLSQKRADAAMAYLASKGVEARRMWAKGYGNDREVRD 160
Query: 137 GHDEDAYAKNRRAI 150
+ +NRR +
Sbjct: 161 CTERSCKVQNRRVV 174
>gi|94500908|ref|ZP_01307434.1| hypothetical protein RED65_11730 [Oceanobacter sp. RED65]
gi|94427027|gb|EAT12009.1| hypothetical protein RED65_11730 [Oceanobacter sp. RED65]
Length = 2033
Score = 60.6 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 53/154 (34%), Gaps = 8/154 (5%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
++ M N T ++ +L+ ++ F S + + S
Sbjct: 801 SVAMFDSPSEANQRTPVAITSALLSLVPENKEVHKPEEAPKFSSFSRDLSQADINAMKSV 860
Query: 72 LGSWLEKHDCDFLIEGHAD-------ELGSRNSSIALGLRRAYAVFNYFV-ARGISASRM 123
L D + GH D N++ L L RA + +Y + + ++
Sbjct: 861 LEQLRGLEDLRIEVAGHTDNVPIAKRSRHIFNNNYELSLARARSAADYLMRELELGPEQV 920
Query: 124 KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
++ YG + P +E + A NRR V + R
Sbjct: 921 TISGYGSQRPVTNNGNEQSRALNRRVEVNILAAR 954
>gi|239817632|ref|YP_002946542.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
gi|239804209|gb|ACS21276.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
Length = 205
Score = 60.6 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 60/146 (41%), Gaps = 5/146 (3%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDS--VFFDTSSYSIRPADIQVL 69
A + SG +D + P V + + V+F+ ++ PA QV+
Sbjct: 62 ATAAVGASGAPVVDQ--ADPAKVQADHKILFDMRPPAPQRYTVYFEVGGTTLTPASQQVM 119
Query: 70 SN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
+ L + + D ++ GH D G+ + L RRA V FV R A R++
Sbjct: 120 NEALMAAQSRSGSDIVVTGHTDTKGALEQNDMLSQRRAQEVAQLFVERQFPAKRIEAVGR 179
Query: 129 GKEMPSVYGHDEDAYAKNRRAIVFLK 154
G+ +V DE +NRR + ++
Sbjct: 180 GERELAVPTADEVDEPRNRRVTIEVR 205
>gi|167950567|ref|ZP_02537641.1| Cobyrinic acid ac-diamide synthase [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 202
Score = 60.6 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 10/47 (21%), Positives = 18/47 (38%)
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+ + G+ R+ +G+ P E KNRR + + G
Sbjct: 1 MVDLISRLGVEPKRLAAIGFGEYHPIADNTSEAGRQKNRRVTLVIIG 47
>gi|4579742|dbj|BAA75215.1| OmpA-like outer membrane protein [Aggregatibacter
actinomycetemcomitans]
Length = 346
Score = 60.6 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 54/138 (39%), Gaps = 10/138 (7%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGH 88
+ + + S+ V F +++P L + + + ++ + + G+
Sbjct: 209 GQGVAPAPAPEVVRKTFSLNSDVTFAFGKANLKPQAQNTLDGIYGEIAQVNNANVQVAGY 268
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE-------- 140
D +GS + L RRA V NY V++G+S + T +GK P +
Sbjct: 269 TDRIGSDAYNQKLSQRRAETVANYLVSKGVSQQAISATGHGKANPVTGNKCDVVKGRKAL 328
Query: 141 -DAYAKNRRAIVFLKGCR 157
A +RR + + G +
Sbjct: 329 IACLADDRRVEIAVNGTK 346
>gi|86136455|ref|ZP_01055034.1| flagellar motor protein [Roseobacter sp. MED193]
gi|85827329|gb|EAQ47525.1| flagellar motor protein [Roseobacter sp. MED193]
Length = 791
Score = 60.6 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 44/125 (35%), Gaps = 14/125 (11%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH--------DCDFLIEGHADELG 93
E V F + S + A ++ + L+ + ++GH D
Sbjct: 663 EGDRFVFASEVLFASGSADLSRAGEGEVAKVAQILQSVAAEIPPELNWIIRVDGHTDNTA 722
Query: 94 S-----RNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+ + L RA +V + + GI+ R+ +G+ P +A A+NR
Sbjct: 723 MAGSEKYSDNWELSQGRALSVVRFMIENLGIAPDRLAANGFGEFQPVNTDDTPEARAQNR 782
Query: 148 RAIVF 152
R +
Sbjct: 783 RIELK 787
>gi|329948277|ref|ZP_08295121.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386]
gi|328522801|gb|EGF49909.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386]
Length = 490
Score = 60.6 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 51/142 (35%), Gaps = 3/142 (2%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
+ + ++ + D L + + + + V F + S + A L +
Sbjct: 145 VTEQAAASPIEINSRTVDGSLGARTGDKDVTIVMASDVTFASDSADLAAAAEAQLQTVAG 204
Query: 75 WLEKHD--CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKE 131
+ ++ I GH D++ + AL +RA AV V G+
Sbjct: 205 QISQYPDGGTLTIVGHTDDVQDDAYNQALSEKRANAVKTRLEQLTGLDKWNPSVAGKGES 264
Query: 132 MPSVYGHDEDAYAKNRRAIVFL 153
P V G ++A A NRR + L
Sbjct: 265 EPRVSGTTDEARAANRRVEITL 286
>gi|254487597|ref|ZP_05100802.1| OmpA family domain protein [Roseobacter sp. GAI101]
gi|214044466|gb|EEB85104.1| OmpA family domain protein [Roseobacter sp. GAI101]
Length = 312
Score = 60.6 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 55/144 (38%), Gaps = 2/144 (1%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+++ + DT+++ ++ V S+ F+T + + PA + L +
Sbjct: 163 SLSDTAAEPTGAADTQVAEIRQPDALAATLVNTGRVVLSSLEFETGTSGLGPAKVAALDS 222
Query: 72 LGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYG 129
L ++L + GH D +G ++AL RA +V A G+S +++ G
Sbjct: 223 LAAFLAGDPALRVALVGHTDTVGGLEDNVALSRSRAASVRQRLIDAYGVSPDQLEAQGMG 282
Query: 130 KEMPSVYGHDEDAYAKNRRAIVFL 153
P NRR L
Sbjct: 283 YLAPIASNLTAQGREANRRVEAVL 306
>gi|77165349|ref|YP_343874.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707]
gi|254434450|ref|ZP_05047958.1| OmpA family protein [Nitrosococcus oceani AFC27]
gi|76883663|gb|ABA58344.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707]
gi|207090783|gb|EDZ68054.1| OmpA family protein [Nitrosococcus oceani AFC27]
Length = 466
Score = 60.6 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F S ++ P + L++L + ++ + I G+AD G + L +RA AV +Y
Sbjct: 344 FRLESAALEPHHRRQLNDLANQVKSNPYAEIEIVGYADTTGPLAFNQRLSEQRANAVCDY 403
Query: 113 FVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
++RG+ S++ + G+ P V E A+NRR +F +
Sbjct: 404 LLSRGVEGSKIKSASGRGEGEPLVPERAEADRARNRRVEIFFR 446
>gi|325105158|ref|YP_004274812.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
gi|324974006|gb|ADY52990.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
Length = 593
Score = 60.6 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 6/112 (5%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
V ++ +D IRP ++L NL + + + H D GS ++ L +RA
Sbjct: 476 VLKNINYDFDKSDIRPDAARILDNLVNILKQNPSLRIELSSHTDSRGSDAYNLRLSQKRA 535
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE-----DAYAKNRRAIVFL 153
+ Y V RGI SR+ +G+ +E + NRR V +
Sbjct: 536 ESAVKYLVDRGIDKSRLVARGFGETKLLNKCANEVDCTDAEHEVNRRTEVKV 587
>gi|255322336|ref|ZP_05363482.1| OmpA/MotB [Campylobacter showae RM3277]
gi|255300709|gb|EET79980.1| OmpA/MotB [Campylobacter showae RM3277]
Length = 256
Score = 60.6 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 47/130 (36%), Gaps = 7/130 (5%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV-LSNLGSWLEKHDCDFL--I 85
+S + + F + ++ F S ++ D + L + + K D + +
Sbjct: 105 ASGSPEVTFEESESGFVIRLPANLLFAKDSAKLQNDDALLFLKRIAMVIAKLPPDVVANV 164
Query: 86 EGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
GH D + L RA +V + + G+ ++ ++ + P V E
Sbjct: 165 IGHTDSEQPASTEFKDNWQLSSARAISVVSELIKDGVDPKKLTASAKAEFEPFVTNFTEQ 224
Query: 142 AYAKNRRAIV 151
KNRR +
Sbjct: 225 GREKNRRVEI 234
>gi|126736947|ref|ZP_01752682.1| OmpA family protein [Roseobacter sp. SK209-2-6]
gi|126721532|gb|EBA18235.1| OmpA family protein [Roseobacter sp. SK209-2-6]
Length = 187
Score = 60.6 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 4/100 (4%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FF T ++I A Q L + + + F+I GH D S ++ L RRA AV
Sbjct: 89 FFATDRHAINAAGQQRLKE--FFQKANARAFIISGHTDSRASDEYNMRLSERRANAVARV 146
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
I A ++V YG+ P + A+NRR +
Sbjct: 147 --GNSIGARIIEVRGYGERDPRKPNNSAANMAENRRVEII 184
>gi|261868235|ref|YP_003256157.1| outer membrane protein A [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|2828561|gb|AAC00068.1| outer membrane protein 34 [Aggregatibacter actinomycetemcomitans]
gi|261413567|gb|ACX82938.1| outer membrane protein A [Aggregatibacter actinomycetemcomitans
D11S-1]
Length = 346
Score = 60.6 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 54/138 (39%), Gaps = 10/138 (7%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGH 88
+ + + S+ V F +++P L + + + ++ + + G+
Sbjct: 209 GQGVAPAPAPEVVRKTFSLNSDVTFAFGKANLKPQAQNTLDGIYGEIAQVNNANVQVAGY 268
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE-------- 140
D +GS + L RRA V NY V++G+S + T +GK P +
Sbjct: 269 TDRIGSDAYNQKLSQRRAETVANYLVSKGVSQQAISATGHGKANPVTGNKCDAVKGRKAL 328
Query: 141 -DAYAKNRRAIVFLKGCR 157
A +RR + + G +
Sbjct: 329 IACLADDRRVEIAVNGTK 346
>gi|186477671|ref|YP_001859141.1| OmpA/MotB domain-containing protein [Burkholderia phymatum STM815]
gi|184194130|gb|ACC72095.1| OmpA/MotB domain protein [Burkholderia phymatum STM815]
Length = 590
Score = 60.6 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 41/144 (28%), Gaps = 5/144 (3%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-- 71
+ S + + + V F +S + + L
Sbjct: 442 AQAVADAAQSFRNAARSLLAPGASCATTDLLKTLNLQVVNFASSDAHVPQSAFDDLGQSA 501
Query: 72 ---LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
H + G++D +GS +++ L RA AV + V G+ A + Y
Sbjct: 502 KLLQACAKSGHALKLEVAGYSDNVGSESANRELSKERADAVRAFLVKAGVPADALIARGY 561
Query: 129 GKEMPSVYGHDEDAYAKNRRAIVF 152
G E NRR
Sbjct: 562 GNVRAVASNATESGRFANRRIEFT 585
>gi|325102858|ref|YP_004272512.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
gi|324971706|gb|ADY50690.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
Length = 141
Score = 60.6 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 6/110 (5%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYA 108
+++++D ++IRP L L L+ + + H D G ++ L +RA +
Sbjct: 29 ENIYYDFDKWNIRPDAAVELDKLVKILKDNPTIWIELGSHTDSRGKDAYNLNLSQKRAES 88
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGH-----DEDAYAKNRRAIVFL 153
Y V+RGI +R+ YG+ E+ + NRR +
Sbjct: 89 AVGYIVSRGIDKNRIAARGYGETQLLNRCSNGVECTEEEHQLNRRTEFKI 138
>gi|330719944|gb|EGG98406.1| General secretion pathway protein A [gamma proteobacterium
IMCC2047]
Length = 141
Score = 60.6 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNSSIALGLRRAYA 108
++F+ + + P ++ L + +++ +++GH D G + S+I + +RA
Sbjct: 34 TIFYASGRTKLAPEVLEQLDLIIRYVKADKRIKRVVVDGHTDSAGDKESNIRVSKQRANL 93
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V YF GIS+ R+ + +G P+ ++ A+NRR + L
Sbjct: 94 VVAYFKKAGISSKRIVMRWHGDRYPTAANDTDEGQARNRRVTIRL 138
>gi|313905138|ref|ZP_07838507.1| OmpA/MotB domain protein [Eubacterium cellulosolvens 6]
gi|313470041|gb|EFR65374.1| OmpA/MotB domain protein [Eubacterium cellulosolvens 6]
Length = 293
Score = 60.6 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 46/139 (33%), Gaps = 9/139 (6%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVL---SNLGSWLEKHDCDFLI 85
++ + + S ++ + FF+ S ++ + Q L + + + I
Sbjct: 109 AAGISDVQVSRGKDYTFIEFKNKAFFEGDSSALTASGRQALDIFCAVLAPEKDQVSQINI 168
Query: 86 EGHADELGSRNSSIALGLRRAYAVFN------YFVARGISASRMKVTSYGKEMPSVYGHD 139
GH S + G R ++ I +++ YG+ P
Sbjct: 169 MGHTAAAQSAKTDSIRGDRMLASMRAAEVLVFIQEKNVIEPAKLVSMEYGEYRPIADNST 228
Query: 140 EDAYAKNRRAIVFLKGCRA 158
E+ A NRR + L A
Sbjct: 229 EEGRAANRRVEILLIDAGA 247
>gi|241113057|ref|YP_002972892.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240861265|gb|ACS58931.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 184
Score = 60.6 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 55/138 (39%), Gaps = 1/138 (0%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-L 76
+ T +P +E F +VG ++F S ++ P + L N +W
Sbjct: 41 AAAPMTGQTNDPAPGFENVAMGSEEDFILNVGRRIYFKQDSATLDPVAMATLDNQAAWLN 100
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
++G AD+ GS L +RA A Y V++G+ A RM YG +
Sbjct: 101 RNPSWLLKLQGFADDSGSAAKMETLSQKRADAAMAYLVSKGVDARRMWAKGYGNDREVRD 160
Query: 137 GHDEDAYAKNRRAIVFLK 154
+ +NRR + L+
Sbjct: 161 CTERSCKVQNRRVVTNLR 178
>gi|170693710|ref|ZP_02884868.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
gi|170141492|gb|EDT09662.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
Length = 215
Score = 60.6 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 8/119 (6%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FD ++PA + L +L S ++ + + ++ G+ D +GS + L LR
Sbjct: 94 ITYQADALFDFDKAVLKPAGKEKLDDLASKIQGLNLEVVVATGYTDRIGSDKYNDRLSLR 153
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY-------AKNRRAIVFLKGC 156
RA AV Y V++GI ++R+ GK P G ++ A +RR V + G
Sbjct: 154 RAQAVKAYLVSKGIESNRIYTEGKGKRNPVTTGCNQKNRKQLIACLAPDRRVEVEVVGT 212
>gi|332293191|ref|YP_004431800.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332171277|gb|AEE20532.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 236
Score = 60.6 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 31/82 (37%), Gaps = 1/82 (1%)
Query: 73 GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKE 131
+ + I GH D +GS + GL+ + V Y AR ++ TS G+E
Sbjct: 154 ALLKKHPEKKVTILGHTDNVGSSKDNFDQGLKMSRQVKWYLTARRGIPRHKITATSRGEE 213
Query: 132 MPSVYGHDEDAYAKNRRAIVFL 153
P +N R + +
Sbjct: 214 EPIANNKSLSGRQENNRIEIIV 235
>gi|312116065|ref|YP_004013661.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100]
gi|311221194|gb|ADP72562.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100]
Length = 339
Score = 60.6 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 12/118 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIEGHAD----ELGSR 95
+FFD+ S + P L LG+ L + I+GH D +
Sbjct: 219 FQSEIFFDSGSADLSPLGYAELDKLGTALRDLENKIPRDINWVLRIDGHTDVRPIATAAF 278
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L +RA +V Y V++G+ +R+ +G+ P G+ + +NRR + L
Sbjct: 279 RSNWELSSQRAISVVKYLVSKGVPPNRLVAAGFGEYQPLTSGYTDADLRRNRRIELKL 336
>gi|253996272|ref|YP_003048336.1| OmpA/MotB domain-containing protein [Methylotenera mobilis JLW8]
gi|253982951|gb|ACT47809.1| OmpA/MotB domain protein [Methylotenera mobilis JLW8]
Length = 365
Score = 60.6 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 46/121 (38%), Gaps = 8/121 (6%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNS 97
+ + + ++ S F ++ + + K + GH D+LGS
Sbjct: 234 CVPQYETITIEASKLFAFDEAKLKDTSVLDNEVVPKMKENKIFASVKVTGHTDKLGSEAY 293
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY-------AKNRRAI 150
+ L +RA V +Y +A+GI A R+ G+ +P V A NRR
Sbjct: 294 NQKLSEKRANQVRDYLIAQGIEADRLVAVGKGELVPVVSCDGVKGRKALIECLAPNRRVE 353
Query: 151 V 151
+
Sbjct: 354 I 354
>gi|152989276|ref|YP_001348049.1| hypothetical protein PSPA7_2689 [Pseudomonas aeruginosa PA7]
gi|150964434|gb|ABR86459.1| hypothetical protein PSPA7_2689 [Pseudomonas aeruginosa PA7]
Length = 465
Score = 60.6 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 51/146 (34%), Gaps = 8/146 (5%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD-SVFFDT--SSYSIRPAD---IQ 67
+++ SG + + Q + +V F S + +Q
Sbjct: 321 AIVTRSGFVAQRIQAVQVAPRPQMPAEYRQLAEQARRLTVNFRFQEGSALLDNKALLDVQ 380
Query: 68 VLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
L + +K ++ G D S+ L RA AV ARG + R ++
Sbjct: 381 RLLDYLRQNQKMRKRTVLVGFGDPKSDAERSVLLSRLRAMAVRREL-ARGGVSFR-EIVG 438
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFL 153
+G E+P E KNRR V++
Sbjct: 439 FGDELPVASNEQEAGRQKNRRVEVWV 464
>gi|299773289|gb|ADJ38719.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 367
Score = 60.6 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 51/123 (41%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + + G+ D +G +++ L
Sbjct: 241 AFSSDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 300
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V +G++ + + YG+ P + A +RR + ++
Sbjct: 301 KRAETVANYIVFKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALITCLAPDRRVEIQVQ 360
Query: 155 GCR 157
G +
Sbjct: 361 GSK 363
>gi|317151982|ref|YP_004120030.1| OmpA/MotB domain-containing protein [Desulfovibrio aespoeensis
Aspo-2]
gi|316942233|gb|ADU61284.1| OmpA/MotB domain protein [Desulfovibrio aespoeensis Aspo-2]
Length = 273
Score = 60.6 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 34/66 (51%)
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
D+ + + S + L RA AV+ + + RG+ ++V +GK MP ++ A+NR
Sbjct: 167 PGDDEENPDLSWKISLSRALAVYRHLIDRGMRPGMLRVEGFGKYMPFYTQTTVESRARNR 226
Query: 148 RAIVFL 153
R + L
Sbjct: 227 RVDIVL 232
>gi|312270717|gb|ADQ55759.1| OmpA [Haemophilus parasuis]
Length = 365
Score = 60.6 bits (145), Expect = 8e-08, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 52/123 (42%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + + G+ D +G +++ L
Sbjct: 239 AFSSDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLENPAVQVNGYTDRIGKDAANLTLSQ 298
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 299 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQVQ 358
Query: 155 GCR 157
G +
Sbjct: 359 GSK 361
>gi|254369026|ref|ZP_04985039.1| hypothetical protein FTAG_00866 [Francisella tularensis subsp.
holarctica FSC022]
gi|157121947|gb|EDO66117.1| hypothetical protein FTAG_00866 [Francisella tularensis subsp.
holarctica FSC022]
Length = 417
Score = 60.6 bits (145), Expect = 8e-08, Method: Composition-based stats.
Identities = 31/179 (17%), Positives = 65/179 (36%), Gaps = 26/179 (14%)
Query: 2 QYSTIFIILSAITMMSISGI-DNLDTKISSPDTVLNESSLQEQFSSS------------- 47
+ + ++ S +T +S D+ D E + S+
Sbjct: 3 KLLKLCLMTSLLTTLSACQTLDDKDKDSGPLTFPTLEPCTAKLLQSNQSFICVKEQTGPD 62
Query: 48 -VGDSVFFDTSSYSIRPADIQVLSNLGSW----------LEKHDCDFLIEGHADELGSRN 96
+ ++ FD SY++ +VL L ++ ++ + + D+ +
Sbjct: 63 LIETNIKFDADSYTLNTQAKKVLDKLFAYLKLTDTTNFTIKGYAGKVESKILTDQKILTD 122
Query: 97 SSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+I L RA +V Y V +G S+ + + + G + P + A N+R + LK
Sbjct: 123 YNIRLSKNRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDSTSSRAINQRVEITLK 181
>gi|56708795|ref|YP_164836.1| OmpA family protein [Ruegeria pomeroyi DSS-3]
gi|56680480|gb|AAV97145.1| OmpA family protein [Ruegeria pomeroyi DSS-3]
Length = 180
Score = 60.6 bits (145), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 39/106 (36%), Gaps = 4/106 (3%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
++ FF T SY I L + +I GH D S ++ L + RA
Sbjct: 76 TMPADQFFATDSYRISSEGQARLRQFFQETGANGY--IITGHTDSRASDAYNLRLSVNRA 133
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+V R A + V YG+ P V A+NRR +
Sbjct: 134 NSVARV--GRATGARIVDVRGYGERDPRVPNTSAANMAQNRRVEII 177
>gi|152965627|ref|YP_001361411.1| OmpA/MotB domain protein [Kineococcus radiotolerans SRS30216]
gi|151360144|gb|ABS03147.1| OmpA/MotB domain protein [Kineococcus radiotolerans SRS30216]
Length = 342
Score = 60.6 bits (145), Expect = 8e-08, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 48/141 (34%), Gaps = 5/141 (3%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
ID T D V + V D+VFF +S + +VL + L
Sbjct: 135 AKQIDAALTAKGDQDQVTYRITSDGLVVGLVADNVFFANASAEVEEKGREVLDVIAPILA 194
Query: 78 KHDCDFLIEGHADE-----LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
+ D ++GH + + L RA V F A GI + + T Y
Sbjct: 195 QLPNDIAVQGHTNSLSLSATTRYRDNWDLSAARAMTVVQRFTAAGIPGNHLSGTGYADSR 254
Query: 133 PSVYGHDEDAYAKNRRAIVFL 153
P D A NRR + +
Sbjct: 255 PLYPNEDPKALTGNRRVDLVV 275
>gi|149910946|ref|ZP_01899577.1| hypothetical protein PE36_12217 [Moritella sp. PE36]
gi|149806013|gb|EDM65997.1| hypothetical protein PE36_12217 [Moritella sp. PE36]
Length = 457
Score = 60.6 bits (145), Expect = 8e-08, Method: Composition-based stats.
Identities = 29/151 (19%), Positives = 54/151 (35%), Gaps = 6/151 (3%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
+ +A++ S++ + ++ L ++ + S F + S I PA +
Sbjct: 305 VSAAVSASSLTLKLEQLLQTEIMRNIVVVQELSDRIRIRITSSDLFASGSDQINPAYQPI 364
Query: 69 LSNLGSWLEKHDCDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMK 124
+ + LE LI GH D+ S+ L L RA ++ + R+
Sbjct: 365 IRKIARTLESTQGQILITGHTDKQQIISSRYPSNWHLSLARATSIADVLAKDTRLGGRLL 424
Query: 125 VTSYGKEMPSV--YGHDEDAYAKNRRAIVFL 153
G P D +A NRR + +
Sbjct: 425 PEGRGSSEPLAVDPTFSHDQHALNRRVEIDI 455
>gi|84624549|ref|YP_451921.1| hypothetical protein XOO_2892 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|84368489|dbj|BAE69647.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 438
Score = 60.6 bits (145), Expect = 8e-08, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 41/113 (36%), Gaps = 5/113 (4%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG----SRNSSIAL 101
+ + F + S + +L + + LE+ ++ GH D+ + AL
Sbjct: 322 VRLASASMFPSGSAELDADQTYLLERVAAALEQVPGRVVVVGHTDDQPVRSLRFKDNFAL 381
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV-YGHDEDAYAKNRRAIVFL 153
RRA +V A R++ + G P A+NRR + L
Sbjct: 382 SARRAESVGAVLAAGLRDRRRVQTSGAGDSQPIALPPQLPGNRARNRRVEILL 434
>gi|254464778|ref|ZP_05078189.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
gi|206685686|gb|EDZ46168.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
Length = 613
Score = 60.6 bits (145), Expect = 8e-08, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 44/119 (36%), Gaps = 14/119 (11%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNL--------GSWLEKHDCDFLIEGHADE-----LGS 94
V F S ++ PA ++ + + + ++GH D+
Sbjct: 491 FASEVLFAPGSATLSPAGKVEIAKVVSILQSVVAAIPPEISWIIRVDGHTDDTPLVAHPK 550
Query: 95 RNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
N + L RA +V Y A G+ SR+ +G+ P +A A+NRR +
Sbjct: 551 FNDNWELSQGRALSVVRYMVEALGVPPSRLAANGFGEYQPVNSAGTPEARAQNRRIELK 609
>gi|322515689|ref|ZP_08068662.1| OmpA protein [Actinobacillus ureae ATCC 25976]
gi|322118234|gb|EFX90526.1| OmpA protein [Actinobacillus ureae ATCC 25976]
Length = 383
Score = 60.2 bits (144), Expect = 8e-08, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 52/143 (36%), Gaps = 12/143 (8%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK---HDCDFLIE 86
+ + + + V FD S+ PA L + + +
Sbjct: 240 QGAAPVEAAPEVVTKNFAFSSDVLFDFGKSSLNPAAATALDAANTEIANLGLATLAIQVN 299
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY- 143
G+ D +G S++ L RRA V NY V++G +A+ + YG+ P
Sbjct: 300 GYTDRIGKEASNLKLSQRRAETVANYLVSKGQNAANVTAVGYGEANPVTGATCDAVKGRK 359
Query: 144 ------AKNRRAIVFLKGCRANT 160
A +RR V ++G + T
Sbjct: 360 ALIACLAPDRRVEVQVQGSKNVT 382
>gi|110639014|ref|YP_679223.1| OmpA family outer membrane protein [Cytophaga hutchinsonii ATCC
33406]
gi|110281695|gb|ABG59881.1| outer membrane protein, OmpA family [Cytophaga hutchinsonii ATCC
33406]
Length = 323
Score = 60.2 bits (144), Expect = 8e-08, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 49/115 (42%), Gaps = 7/115 (6%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGS------RNSS 98
S+ + + F + S + P ++ L L + E+ D ++EGH D++ +
Sbjct: 194 VSLAEQLLFKSGSTDVDPKGVEALKKLAAVLKEQQDITIMVEGHTDDVPVSKGTNGIKDN 253
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L + RA ++ G+ + +G+ +P +A ++NRR + L
Sbjct: 254 WDLSVLRATSITRILTGAGVDPIHVVPAGHGEFIPVATAKTAEARSQNRRTEIIL 308
>gi|94267383|ref|ZP_01290861.1| OmpA/MotB [delta proteobacterium MLMS-1]
gi|93452026|gb|EAT02724.1| OmpA/MotB [delta proteobacterium MLMS-1]
Length = 388
Score = 60.2 bits (144), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 51/139 (36%), Gaps = 5/139 (3%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS 70
+ + + ++ K + + + + + V F+ IRPAD L
Sbjct: 238 AMAAFAEKAFLQKVEDKPVAEAVKEKKEPVHRTEARRL--EVNFEFDQARIRPADQAALG 295
Query: 71 NLGSWLEKHDC--DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTS 127
+L+K+ + I GH +G + L RRA V + V + I++ R+
Sbjct: 296 RFAQFLKKYPELEEIEIAGHTCNMGPAEYNRQLSQRRAANVVKFLVEKEGIASERLLAKG 355
Query: 128 YGKEMPSVYGHDEDAYAKN 146
YG + P +N
Sbjct: 356 YGSDKPIASNDTVAGRQQN 374
>gi|294666305|ref|ZP_06731554.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292603907|gb|EFF47309.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 419
Score = 60.2 bits (144), Expect = 8e-08, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 45/123 (36%), Gaps = 5/123 (4%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG--- 93
+ Q + + F + + P V++ + + +E+ ++ GH D++
Sbjct: 294 DEQADGQTRVRLSSAAMFASGGVEVEPQQRGVIAQIAAAIEQLPGRVIVVGHTDDVPVRS 353
Query: 94 -SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV-YGHDEDAYAKNRRAIV 151
+ AL RA A+ A+ + R++ G P A+NRR +
Sbjct: 354 LRFQDNYALSAARAQALAQVLQAQLSTPGRVEAIGAGDSQPIAQPVQLPANRARNRRVEI 413
Query: 152 FLK 154
+
Sbjct: 414 LFQ 416
>gi|148546371|ref|YP_001266473.1| OmpA/MotB domain-containing protein [Pseudomonas putida F1]
gi|148510429|gb|ABQ77289.1| OmpA/MotB domain protein [Pseudomonas putida F1]
Length = 313
Score = 60.2 bits (144), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNSSIALGLRRAYA 108
V F + A L + +++ + GH+D G+R ++ L RRA A
Sbjct: 176 QVGFPGGGIELDAAAKARLDVILDYMKADPTVNHVELNGHSDNSGNRLTNRDLSRRRALA 235
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V +YF A G+ ++ V +G+ P + A+NRR + L
Sbjct: 236 VADYFKANGVPEEQITVRFHGERYPLAKNNSASNRARNRRVNIEL 280
>gi|124010476|ref|ZP_01695114.1| immunogenic 75 kDa protein PG4, putative [Microscilla marina ATCC
23134]
gi|123982378|gb|EAY23917.1| immunogenic 75 kDa protein PG4, putative [Microscilla marina ATCC
23134]
Length = 645
Score = 60.2 bits (144), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 6/109 (5%)
Query: 51 SVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
++++D Y IRP ++ L L + H D + ++ L RR+ +
Sbjct: 534 TIYYDLDKYFIRPDAVKTLDELLVILYRNPKMRIGLSSHTDSRNTSKYNVQLSQRRSQSA 593
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHD-----EDAYAKNRRAIVFL 153
Y V+RGIS R+ V +G+ D E + NRR V +
Sbjct: 594 LQYLVSRGISPQRIIVDWFGETKLVTPCPDGVPCNETQHQLNRRTEVLV 642
>gi|83854840|ref|ZP_00948370.1| flagellar motor protein [Sulfitobacter sp. NAS-14.1]
gi|83842683|gb|EAP81850.1| flagellar motor protein [Sulfitobacter sp. NAS-14.1]
Length = 582
Score = 60.2 bits (144), Expect = 8e-08, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 44/126 (34%), Gaps = 14/126 (11%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH--------DCDFLIEGHADELG 93
E V F + ++ ++ + L D ++GH D
Sbjct: 454 EGDRFVFSSEVLFPPGAATLSADGRGEIAKVAGILRNIAADIPPEIDWVIRVDGHTDNQP 513
Query: 94 -----SRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+ L RA +V Y + GI+ R+ +G+ P G+ E A A+NR
Sbjct: 514 LSGLGEFADNWELSQARALSVVKYMINFLGIAPERLAANGFGQYQPVASGNTEAARAQNR 573
Query: 148 RAIVFL 153
R + L
Sbjct: 574 RIELKL 579
>gi|256833230|ref|YP_003161957.1| OmpA/MotB domain-containing protein [Jonesia denitrificans DSM
20603]
gi|256686761|gb|ACV09654.1| OmpA/MotB domain protein [Jonesia denitrificans DSM 20603]
Length = 305
Score = 60.2 bits (144), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 3/109 (2%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNS--SIALGLRR 105
V D +FF + + +V+ L + D + IEGHA+ L S N + L R
Sbjct: 170 VSDELFFQADTARLTKTTERVVDTTARILRELDNELSIEGHANSLQSVNYKSNWELSSDR 229
Query: 106 AYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
A V +V +G + +R+ +G P + NRR + +
Sbjct: 230 ATQVLRRYVEKGKISGTRIAAVGFGDTRPLADNDTKRGLKINRRVDIVI 278
>gi|153873003|ref|ZP_02001734.1| outer membrane protein ompA [Beggiatoa sp. PS]
gi|152070531|gb|EDN68266.1| outer membrane protein ompA [Beggiatoa sp. PS]
Length = 301
Score = 60.2 bits (144), Expect = 8e-08, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 9/118 (7%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK-HDCDFLIEGHADELGSRNSSI----- 99
V ++ F+TS+ +++ A + L + S L+ ++GH+D R S
Sbjct: 184 VIVFRNLVFNTSTTTLKQASTRQLQKIASVLKMVDPTMVKVKGHSDAQPWRGRSQSESKR 243
Query: 100 ---ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L +RA +V N V G + + YG P V G+ +AKNRR + +K
Sbjct: 244 LNLKLSQQRAESVKNVLVNEGFPKNLTQAKGYGSNDPLVLGNSPAIWAKNRRVEIEVK 301
>gi|332665245|ref|YP_004448033.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332334059|gb|AEE51160.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 798
Score = 60.2 bits (144), Expect = 8e-08, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 40/106 (37%), Gaps = 1/106 (0%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
+ +++ F ++ + + + L S+ I H + + N + L RRA
Sbjct: 688 ILENIIFLSNQAELDSSAYSEIHRLASFLNANPQLGVEIVAHTNNNCTYNFAADLTARRA 747
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ + I+A R++ GKE P V N+R +
Sbjct: 748 EKIAELLIDAQIAAERIRHRGSGKEQPLVSNATLTGRLANQRVEIT 793
>gi|312132146|ref|YP_003999486.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132]
gi|311908692|gb|ADQ19133.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132]
Length = 805
Score = 60.2 bits (144), Expect = 8e-08, Method: Composition-based stats.
Identities = 29/115 (25%), Positives = 45/115 (39%), Gaps = 7/115 (6%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRNSSIALGLR 104
V ++++FD Y IR + L L S E + + H D S+ + L
Sbjct: 687 VVVIENIYFDYGKYYIRRDAREGLDKLVSLMREYPNMKVELYSHTDSRSSKEFNQTLSEN 746
Query: 105 RAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHD-----EDAYAKNRRAIVFL 153
RA + Y RGIS SR+ +G+ D E + NRR + +
Sbjct: 747 RAKSTAEYLFKRGISRSRIVDYKGFGENQLVNGCADGVKCSEAEHQLNRRTEIKV 801
>gi|260576491|ref|ZP_05844481.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
gi|259021374|gb|EEW24680.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
Length = 464
Score = 60.2 bits (144), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 40/120 (33%), Gaps = 14/120 (11%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNL--------GSWLEKHDCDFLIEGHADE-----LGS 94
V F+ S + P ++ + D ++GH D G
Sbjct: 342 FSSEVLFNPGSADLAPEGRAQIAGVVATLNEIAAQIPPGIDWIIRVDGHTDNVPLSGQGE 401
Query: 95 RNSSIALGLRRAYAVFNYFV-ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA AV Y G S R+ T +G+ P G + A NRR + L
Sbjct: 402 FADNWELSQARALAVVRYMQDNLGFSPERLAATGFGEYQPVAVGDAPETRALNRRIELKL 461
>gi|313497453|gb|ADR58819.1| OmpA/MotB domain-containing protein [Pseudomonas putida BIRD-1]
Length = 326
Score = 60.2 bits (144), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNSSIALGLRRAYA 108
V F + A L + +++ + GH+D G+R ++ L RRA A
Sbjct: 176 QVGFPGGGIELDAAAKARLDVILDYMKADPTVNHVELNGHSDNSGNRLANRDLSRRRALA 235
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V +YF A G+ ++ V +G+ P + A+NRR + L
Sbjct: 236 VADYFKANGVPDEQITVRFHGERYPLAKNNSASNRARNRRVNIEL 280
>gi|222055877|ref|YP_002538239.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
gi|221565166|gb|ACM21138.1| OmpA/MotB domain protein [Geobacter sp. FRC-32]
Length = 530
Score = 60.2 bits (144), Expect = 8e-08, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 43/104 (41%), Gaps = 3/104 (2%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLE--KHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
+ F+ + + LS + KH I+GH D +GS ++ L ++RA A
Sbjct: 419 DIMFEFGQADLSNEVKKSLSEVAEQARADKHWTYMRIDGHTDSIGSTGYNMDLSVKRAIA 478
Query: 109 VFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ +Y + + I S++ + GK + NRR +
Sbjct: 479 IASYLIIKEGIDPSKVFIKGLGKSKLIGDNSTTEGRRLNRRFEI 522
>gi|89092902|ref|ZP_01165854.1| ompA family protein [Oceanospirillum sp. MED92]
gi|89082927|gb|EAR62147.1| ompA family protein [Oceanospirillum sp. MED92]
Length = 617
Score = 60.2 bits (144), Expect = 9e-08, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 51/117 (43%), Gaps = 6/117 (5%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGL 103
+ + + F + ++ + + L + + EK+ ++ G +D +G ++ +L L
Sbjct: 497 ADRLSLNFRFHSGTFQLDNKAERDLQRVVDFFEKNPGQQAMLIGFSDSIGDPAANASLSL 556
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
+RA AV +ARGI+ G+ P +NRR +++ +NT
Sbjct: 557 QRAKAVERALLARGINIQ--TTLGMGEAAPIASNQTRIGRERNRRVEIWV---NSNT 608
>gi|115350969|ref|YP_772808.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD]
gi|170698423|ref|ZP_02889496.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
gi|172059974|ref|YP_001807626.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria MC40-6]
gi|115280957|gb|ABI86474.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
gi|170136676|gb|EDT04931.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
gi|171992491|gb|ACB63410.1| OmpA/MotB domain protein [Burkholderia ambifaria MC40-6]
Length = 222
Score = 60.2 bits (144), Expect = 9e-08, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 62/151 (41%), Gaps = 8/151 (5%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
+ + D + V + + FD +++P Q L L S
Sbjct: 62 ATANAKCDGALVAQAPQPPVAPVAPAISSQKITYQADALFDFDKATLKPLGKQKLDELAS 121
Query: 75 WLEKHDCDFLI-EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
++ + + ++ G+ D +GS + L LRRA AV +Y V++G+ A+++ GK P
Sbjct: 122 KIQGMNTEVVVATGYTDRIGSDKYNDRLSLRRAQAVKSYLVSKGVPANKIYTEGKGKRNP 181
Query: 134 SVYGHDEDAY-------AKNRRAIVFLKGCR 157
G ++ A +RR V + G +
Sbjct: 182 VTTGCNQKNRKQLIACLAPDRRVEVEVVGTQ 212
>gi|302037752|ref|YP_003798074.1| putative peptidoglycan-associated lipoprotein [Candidatus
Nitrospira defluvii]
gi|300605816|emb|CBK42149.1| putative Peptidoglycan-associated lipoprotein precursor [Candidatus
Nitrospira defluvii]
Length = 192
Score = 60.2 bits (144), Expect = 9e-08, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 1/105 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAV 109
V FD Y +R + + L+ + L+EG DE+G+ ++ LG RRA +V
Sbjct: 87 DVLFDFDQYVLRDDALTAVEANAKRLKDNRITKVLLEGRCDEVGTSEYNLVLGERRALSV 146
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
Y + GI+ ++ VTSYGK+ P H+ + KNR +K
Sbjct: 147 KRYLESLGINQLQVDVTSYGKDRPLCLQHNPVCWQKNRSVHFVVK 191
>gi|150024643|ref|YP_001295469.1| OmpA family outer membrane protein [Flavobacterium psychrophilum
JIP02/86]
gi|149771184|emb|CAL42651.1| Probable outer membrane protein, OmpA family [Flavobacterium
psychrophilum JIP02/86]
Length = 284
Score = 60.2 bits (144), Expect = 9e-08, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 43/106 (40%), Gaps = 3/106 (2%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
+++ F T+++++ L L +++ I H L +RA AV
Sbjct: 177 NNLNFITNTFAVTNDSRGKLYELLLVMQQRPEMI-ISIHGHLCCVSVDRKDLSTQRAKAV 235
Query: 110 FNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAKNRRAIVFL 153
+ GI +RM +G +P + + E+ A NRR + +
Sbjct: 236 KQFLELNGIEKTRMDFKGFGSSIPLFPLPENTEEERAANRRVEIEV 281
>gi|332664792|ref|YP_004447580.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332333606|gb|AEE50707.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 256
Score = 60.2 bits (144), Expect = 9e-08, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 52/127 (40%), Gaps = 6/127 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHAD 90
+ L + + + T SY++ A + ++ L + L+ + L+EGH D
Sbjct: 116 SSGLTAEERDGRLYLMTSAPMDYKTGSYALSKAQREAVAQLATTLKSNPKLKILVEGHTD 175
Query: 91 ELG-----SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ + L +R+ A+ + G+S +++ G+ MP ++ A
Sbjct: 176 SDKVRGGAAYQDNWELSSKRSLAICRELIKNGVSPAQVATVGRGETMPKADNSTKEGKAA 235
Query: 146 NRRAIVF 152
NRR+ V
Sbjct: 236 NRRSDVV 242
>gi|29653408|ref|NP_819100.1| putative lipoprotein [Coxiella burnetii RSA 493]
gi|153209098|ref|ZP_01947241.1| putative lipoprotein [Coxiella burnetii 'MSU Goat Q177']
gi|154707266|ref|YP_001425363.1| outer membrane protein [Coxiella burnetii Dugway 5J108-111]
gi|161830938|ref|YP_001596037.1| putative lipoprotein [Coxiella burnetii RSA 331]
gi|165923897|ref|ZP_02219729.1| putative lipoprotein [Coxiella burnetii RSA 334]
gi|212213417|ref|YP_002304353.1| outer membrane protein [Coxiella burnetii CbuG_Q212]
gi|212219453|ref|YP_002306240.1| outer membrane protein [Coxiella burnetii CbuK_Q154]
gi|29540670|gb|AAO89614.1| outer membrane protein [Coxiella burnetii RSA 493]
gi|120575507|gb|EAX32131.1| putative lipoprotein [Coxiella burnetii 'MSU Goat Q177']
gi|154356552|gb|ABS78014.1| outer membrane protein [Coxiella burnetii Dugway 5J108-111]
gi|161762805|gb|ABX78447.1| putative lipoprotein [Coxiella burnetii RSA 331]
gi|165916651|gb|EDR35255.1| putative lipoprotein [Coxiella burnetii RSA 334]
gi|212011827|gb|ACJ19208.1| outer membrane protein [Coxiella burnetii CbuG_Q212]
gi|212013715|gb|ACJ21095.1| outer membrane protein [Coxiella burnetii CbuK_Q154]
Length = 186
Score = 60.2 bits (144), Expect = 9e-08, Method: Composition-based stats.
Identities = 24/153 (15%), Positives = 56/153 (36%), Gaps = 8/153 (5%)
Query: 7 FIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADI 66
F +L T ++ + L + S + + + Q V FF + +++ I
Sbjct: 35 FSVLRVTTPLTHARQKALAATLQSRGVQMIQQGSRLQLILPVNR--FFLPQTTTVKEKHI 92
Query: 67 QVLSNLGSWLEKHDCD------FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA 120
+ L + +L + + + + SR + A + ++ G S
Sbjct: 93 ETLRLIALYLHNYKRTHIVHYPIKVYAFSGTVHSRRYRDYESNQYAQVIGSFLWNHGFSP 152
Query: 121 SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+++ V +G + P + A NRR ++ +
Sbjct: 153 AQLSVVGFGAKHPIASYRTPEGNAFNRRVMIQV 185
>gi|126729097|ref|ZP_01744911.1| OmpA family protein [Sagittula stellata E-37]
gi|126710087|gb|EBA09139.1| OmpA family protein [Sagittula stellata E-37]
Length = 227
Score = 60.2 bits (144), Expect = 9e-08, Method: Composition-based stats.
Identities = 39/119 (32%), Positives = 65/119 (54%), Gaps = 4/119 (3%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNS 97
L ++F++ V +V F +S + I L W+ + F + GHAD++G++
Sbjct: 68 DLSQRFAAEVMTTVNFAFNSAQLDQGAIDTLREQARWIRQFPEVRFRVYGHADKVGNQAY 127
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVT-SYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+ +LGLRRA AV NY V++GIS SR++ S+G+ P + E +NRR + + G
Sbjct: 128 NKSLGLRRANAVVNYLVSQGISRSRLEAVVSFGETQPLIV--TEGRERRNRRTVTEVSG 184
>gi|262274869|ref|ZP_06052680.1| outer membrane protein [Grimontia hollisae CIP 101886]
gi|262221432|gb|EEY72746.1| outer membrane protein [Grimontia hollisae CIP 101886]
Length = 197
Score = 60.2 bits (144), Expect = 9e-08, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
+ + + + + S +V F S ++RP++ L L + ++ D
Sbjct: 47 EKCNETLRGAAVDNDGCPRDKTVKQSFRLNVAFANDSSALRPSNYAKLEQLADFLNDQRD 106
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVYGHD 139
IEGHA ++G+ + +++L RRA AV + SR+ YG P +
Sbjct: 107 AHVTIEGHASKVGNPDYNLSLSQRRANAVARALINDFGIAPSRVDAIGYGDTEPLIDEDS 166
Query: 140 EDAYAKNRRAIVFLKGCRANT 160
E A+ NRR + L G + T
Sbjct: 167 EYAHDVNRRVMATLSGSYSTT 187
>gi|90407927|ref|ZP_01216101.1| hypothetical protein PCNPT3_06126 [Psychromonas sp. CNPT3]
gi|90310941|gb|EAS39052.1| hypothetical protein PCNPT3_06126 [Psychromonas sp. CNPT3]
Length = 304
Score = 60.2 bits (144), Expect = 9e-08, Method: Composition-based stats.
Identities = 22/146 (15%), Positives = 50/146 (34%), Gaps = 7/146 (4%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKIS------SPDTVLNESSLQEQFSSSVGDSVFF 54
M T ++++++ + D ++ + L L Q + + F
Sbjct: 1 MNKKTYALLIASLFSVFACSTDTYVSQENINKYENEVQKFLISECLLPQRAIHMASVEHF 60
Query: 55 DTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
Y ++ +D + ++ I GH D GS ++ L +RA + +Y
Sbjct: 61 KFDKYDLQASDQASIDLFIREIKDLKGRIAIVGHTDVQGSLKYNVHLSAQRAQTIKDYLS 120
Query: 115 AR-GISASRMKVTSYGKEMPSVYGHD 139
+ + ++ YG+ P
Sbjct: 121 KQLEVKNYDWEIKYYGETKPLSTQKT 146
Score = 53.7 bits (127), Expect = 9e-06, Method: Composition-based stats.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F+ + D + L + L + LI GH D G+ + + AL RA AV Y
Sbjct: 188 HFEFDKSQLAEKDKKTLDAFINKLAGLNGRILIAGHTDIQGAADYNQALATFRARAVEKY 247
Query: 113 FVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ ++ + +VTS+G+ P H+ A A NRRA V K
Sbjct: 248 LRNKLDASQFIWEVTSFGESKPIDVKHNALANASNRRAFVVFK 290
>gi|209968914|gb|ACJ02818.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 60.2 bits (144), Expect = 9e-08, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 52/123 (42%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + + G+ D +G +++ L
Sbjct: 239 AFSSDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLENPAVQVNGYTDRIGKDAANLTLSQ 298
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 299 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQVQ 358
Query: 155 GCR 157
G +
Sbjct: 359 GSK 361
>gi|161525435|ref|YP_001580447.1| OmpA/MotB domain-containing protein [Burkholderia multivorans ATCC
17616]
gi|171316170|ref|ZP_02905394.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
gi|189349827|ref|YP_001945455.1| OOP family OmpA-OmpF porin [Burkholderia multivorans ATCC 17616]
gi|221201252|ref|ZP_03574292.1| OmpA family protein [Burkholderia multivorans CGD2M]
gi|221206294|ref|ZP_03579307.1| OmpA family protein [Burkholderia multivorans CGD2]
gi|221213575|ref|ZP_03586549.1| OmpA family protein [Burkholderia multivorans CGD1]
gi|254252935|ref|ZP_04946253.1| OmpA/MotB [Burkholderia dolosa AUO158]
gi|124895544|gb|EAY69424.1| OmpA/MotB [Burkholderia dolosa AUO158]
gi|160342864|gb|ABX15950.1| OmpA/MotB domain protein [Burkholderia multivorans ATCC 17616]
gi|171098679|gb|EDT43474.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
gi|189333849|dbj|BAG42919.1| OOP family OmpA-OmpF porin [Burkholderia multivorans ATCC 17616]
gi|221166364|gb|EED98836.1| OmpA family protein [Burkholderia multivorans CGD1]
gi|221173603|gb|EEE06037.1| OmpA family protein [Burkholderia multivorans CGD2]
gi|221179102|gb|EEE11509.1| OmpA family protein [Burkholderia multivorans CGD2M]
Length = 222
Score = 60.2 bits (144), Expect = 9e-08, Method: Composition-based stats.
Identities = 33/151 (21%), Positives = 62/151 (41%), Gaps = 8/151 (5%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
+ + D + V + + FD +++P Q L L S
Sbjct: 62 ATANAKCDGALVAQAPQPPVAPVAPAITSQKITYQADALFDFDKATLKPLGKQKLDELAS 121
Query: 75 WLEKHDCDFLI-EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
++ + + ++ G+ D +GS + L LRRA AV +Y V++G+ A+++ GK P
Sbjct: 122 KIQGMNTEVVVATGYTDRIGSDKYNDRLSLRRAQAVKSYLVSKGVPANKIYTEGKGKRNP 181
Query: 134 SVYGHDEDAY-------AKNRRAIVFLKGCR 157
G ++ A +RR V + G +
Sbjct: 182 VTTGCNQKNRKQLIACLAPDRRVEVEVVGTQ 212
>gi|288957797|ref|YP_003448138.1| chemotaxis protein [Azospirillum sp. B510]
gi|288910105|dbj|BAI71594.1| chemotaxis protein [Azospirillum sp. B510]
Length = 464
Score = 60.2 bits (144), Expect = 9e-08, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 49/117 (41%), Gaps = 11/117 (9%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGS--------WLEKHDCDFLIEGHADELGSRNS-- 97
+ F + S ++ A Q L++L + ++GH D R
Sbjct: 345 FQSELLFPSGSATLEEAGKQRLADLARTLIEIGKVIPPDINWVLRVDGHTDIKPVRFQFS 404
Query: 98 -SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA +V + + +GI A R+ ++G+ P G ++A AKNRR + L
Sbjct: 405 SNWELSSARALSVVKFLIDQGIPAERLAAAAFGEFQPIDPGTSDEALAKNRRIEIKL 461
>gi|238797976|ref|ZP_04641466.1| OmpA domain protein [Yersinia mollaretii ATCC 43969]
gi|238718181|gb|EEQ10007.1| OmpA domain protein [Yersinia mollaretii ATCC 43969]
Length = 246
Score = 60.2 bits (144), Expect = 9e-08, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSV 135
LI GH+D G+ + ++AL RRA V ++ + + + + G P
Sbjct: 159 NNQGRKVLIVGHSDNTGNASLNMALSERRAQVVRDWLIQQSSLSIDDFIIRGMGALEPVA 218
Query: 136 YGHDEDAYAKNRRAIVFL 153
+ ++NRR V L
Sbjct: 219 SNDTKIGQSQNRRVEVLL 236
>gi|330013026|ref|ZP_08307548.1| OmpA family protein [Klebsiella sp. MS 92-3]
gi|328533612|gb|EGF60326.1| OmpA family protein [Klebsiella sp. MS 92-3]
Length = 90
Score = 60.2 bits (144), Expect = 9e-08, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDA 142
+EGH D G + + AL L+RA +V + + + GK+ P
Sbjct: 17 RLEGHTDNYGEDSYNEALSLKRANSVADAWAEGAHVPRSNLVTRGLGKKYPIASNDTAAG 76
Query: 143 YAKNRRAIVFLK 154
A+NRR V +
Sbjct: 77 RAENRRVTVVIS 88
>gi|209968924|gb|ACJ02823.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 367
Score = 60.2 bits (144), Expect = 9e-08, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 51/123 (41%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + G+ D +G +++ L
Sbjct: 241 AFSSDVLFDFGKANLKPAAAQTLDAAHAEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 300
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 301 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQVQ 360
Query: 155 GCR 157
G +
Sbjct: 361 GSK 363
>gi|291617209|ref|YP_003519951.1| YiaD [Pantoea ananatis LMG 20103]
gi|291152239|gb|ADD76823.1| YiaD [Pantoea ananatis LMG 20103]
Length = 405
Score = 60.2 bits (144), Expect = 9e-08, Method: Composition-based stats.
Identities = 20/127 (15%), Positives = 36/127 (28%), Gaps = 4/127 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
L S + F I P +L+ + S ++ L+ D
Sbjct: 265 AAGQLEVSDGAFGSKVIIPADKLFAEQGTVINPVGRAILARVSSAMKDVKGTILVSVFTD 324
Query: 91 ELG----SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ SS RA +V + ++ G P + + +N
Sbjct: 325 DKPVDGSRFASSYEFSFARARSVSQLLQVQLADTHVIRSEGRGDSDPLLPNDSSENRTRN 384
Query: 147 RRAIVFL 153
RR + L
Sbjct: 385 RRVEITL 391
>gi|213420489|ref|ZP_03353555.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Typhi str. E01-6750]
Length = 59
Score = 60.2 bits (144), Expect = 9e-08, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ L +RA +V + + +G+ ASR++ + G P + A+NRR + L
Sbjct: 1 MRLSQQRADSVASSLITQGVDASRIRTSGMGPANPIASNSTAEGKAQNRRVEITLS 56
>gi|85704497|ref|ZP_01035599.1| OmpA/MotB domain protein [Roseovarius sp. 217]
gi|85670905|gb|EAQ25764.1| OmpA/MotB domain protein [Roseovarius sp. 217]
Length = 192
Score = 60.2 bits (144), Expect = 9e-08, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 52/142 (36%), Gaps = 4/142 (2%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + + DN ++ ++ ++ V + FD S ++R L
Sbjct: 49 GLVLAPTNAQDNTGVGDTAATPSATQTYVELAPEEQVSIQISFDFDSSALRADQKPKLVT 108
Query: 72 LGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYG 129
L ++ D F I GH D GS + + L L RA V + I R++ G
Sbjct: 109 LCKVMQTADIGSFRIVGHTDSSGSASYNERLSLLRAQEVKRHLETDCGIEPERLEAVGVG 168
Query: 130 KEMPSVYGHDEDAYAKNRRAIV 151
+ D D+ A NRR
Sbjct: 169 EAFLLDK-ADPDSDA-NRRVEF 188
>gi|325523985|gb|EGD02181.1| putative OmpA family membrane protein [Burkholderia sp. TJI49]
Length = 50
Score = 60.2 bits (144), Expect = 9e-08, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
N V RG++ R+ G P E A+NRR ++L+
Sbjct: 1 NALVQRGVAGGRLSAQGMGASNPIADNATEAGRAQNRRVEIYLR 44
>gi|294011226|ref|YP_003544686.1| OOP-family protein [Sphingobium japonicum UT26S]
gi|292674556|dbj|BAI96074.1| OOP-family protein [Sphingobium japonicum UT26S]
Length = 360
Score = 60.2 bits (144), Expect = 9e-08, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
VFF+ I P +L N + ++ ++ G+AD GS + ++ L RRA
Sbjct: 249 PYIVFFEWDKSDITPDAATILDNAVSAYSNCGSAQVMLAGYADRSGSASYNVGLSQRRAD 308
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
AV Y ++GI + ++G+ P V D +NRR +
Sbjct: 309 AVKAYISSKGIPDGVITTQAFGESNPRVETADGVRELQNRRVEIT 353
>gi|78485928|ref|YP_391853.1| OmpA/MotB [Thiomicrospira crunogena XCL-2]
gi|78364214|gb|ABB42179.1| OmpA/MotB family protein [Thiomicrospira crunogena XCL-2]
Length = 259
Score = 60.2 bits (144), Expect = 9e-08, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 46/135 (34%), Gaps = 13/135 (9%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGH 88
+ + + + + + F+ S + P Q+++ L + IEGH
Sbjct: 108 NPAEAMTLNENELRIDLPGELLFEVGSTQLEPKSKQLITALAKEINAFPLHNYLIEIEGH 167
Query: 89 ADELGSR----NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA-- 142
D+ S+ L RA +V F GI+ R+K Y P +
Sbjct: 168 TDDTPIHSIRFPSNWELSAGRAISVLKVFFNTGINKQRLKAIGYADTRPKKPNRTKKGIA 227
Query: 143 ----YAKNRRAIVFL 153
A NRR + +
Sbjct: 228 IPGNQATNRRVEIKV 242
>gi|107100492|ref|ZP_01364410.1| hypothetical protein PaerPA_01001517 [Pseudomonas aeruginosa PACS2]
Length = 281
Score = 60.2 bits (144), Expect = 9e-08, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 31/69 (44%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
L+ GH D GS+ + L RA +V F G+ ++++ G +MP
Sbjct: 198 ILVLGHTDSTGSKAVNDKLSFERAQSVAAIFRLSGLKGDQLRLKGVGSDMPRADNASAAG 257
Query: 143 YAKNRRAIV 151
A+NRR V
Sbjct: 258 RAQNRRVEV 266
>gi|83950067|ref|ZP_00958800.1| OmpA family protein [Roseovarius nubinhibens ISM]
gi|83837966|gb|EAP77262.1| OmpA family protein [Roseovarius nubinhibens ISM]
Length = 220
Score = 60.2 bits (144), Expect = 9e-08, Method: Composition-based stats.
Identities = 36/138 (26%), Positives = 64/138 (46%), Gaps = 4/138 (2%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
G + + + + +L +F++ V +V F +S + L W+ +
Sbjct: 41 GNATMQNQHAMTNEGAYVYNLSHRFANEVATTVNFAFNSAQLDAGARDTLREQAHWIRQF 100
Query: 80 D-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT-SYGKEMPSVYG 137
F + GH D++GS + ALG+ RA AV Y ++GIS SR++ S+G+ P +
Sbjct: 101 PEVRFRVYGHTDKVGSHGYNKALGMARARAVVAYLASQGISTSRLEAVASFGETQPLIV- 159
Query: 138 HDEDAYAKNRRAIVFLKG 155
E +NRR + + G
Sbjct: 160 -TEGRERRNRRTVTEVSG 176
>gi|115522688|ref|YP_779599.1| hypothetical protein RPE_0661 [Rhodopseudomonas palustris BisA53]
gi|115516635|gb|ABJ04619.1| OmpA/MotB domain protein [Rhodopseudomonas palustris BisA53]
Length = 341
Score = 60.2 bits (144), Expect = 9e-08, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 43/117 (36%), Gaps = 11/117 (9%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLG--------SWLEKHDCDFLIEGHADELGS---RN 96
VFFDT + P L L ++ ++GH D
Sbjct: 222 FQSEVFFDTGQAVLLPEGRAELDKLASVLIDLGKQIPDEITWVLRVDGHTDVRPITGAFK 281
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA +V Y V G+ A R+ + + P E+AY +NRR + L
Sbjct: 282 SNWELSSARAISVVQYLVTLGVPAQRLVAAGFAEFQPLDVAATEEAYRRNRRIELKL 338
>gi|331004882|ref|ZP_08328299.1| OmpA/MotB [gamma proteobacterium IMCC1989]
gi|330421336|gb|EGG95585.1| OmpA/MotB [gamma proteobacterium IMCC1989]
Length = 232
Score = 60.2 bits (144), Expect = 9e-08, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 52/129 (40%), Gaps = 10/129 (7%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD----FLIEG 87
D + + +V F +S +++ ++L+ L + L+ + + ++ G
Sbjct: 69 DPLATGRVTLRDGRIGISGNVLFANNSSTLQENGRELLNTLVAPLKIYLSEREQLLMVSG 128
Query: 88 HADELGSRN------SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
D+ + + L +RA V + G+ +S + ++G + P V D
Sbjct: 129 FTDDKPIQTGNLNFSDNWDLSAQRALTVTRALIEEGMPSSMVFAAAFGAQQPVVPNTDRA 188
Query: 142 AYAKNRRAI 150
+ AKNRR
Sbjct: 189 SRAKNRRVE 197
>gi|260427879|ref|ZP_05781858.1| OmpA/MotB domain protein [Citreicella sp. SE45]
gi|260422371|gb|EEX15622.1| OmpA/MotB domain protein [Citreicella sp. SE45]
Length = 627
Score = 60.2 bits (144), Expect = 9e-08, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 43/111 (38%), Gaps = 6/111 (5%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG-----SRNSSIALGL 103
G++ + I + + + E D ++GH D++ + + L
Sbjct: 514 GEAELSRSGQMEIAKIASILRNVMADIPEGLDWIIRVDGHTDDIPLRPGARFSDNWELSQ 573
Query: 104 RRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA +V Y V GI R+ +G+ P DA A+NRR + L
Sbjct: 574 ARALSVVRYLVDFLGIPPDRLSANGFGQYQPIDPSDTADARAQNRRIELKL 624
>gi|186475502|ref|YP_001856972.1| OmpA/MotB domain-containing protein [Burkholderia phymatum STM815]
gi|184191961|gb|ACC69926.1| OmpA/MotB domain protein [Burkholderia phymatum STM815]
Length = 215
Score = 60.2 bits (144), Expect = 9e-08, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 8/119 (6%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FD ++PA + L +L S ++ + + ++ G+ D +GS + L LR
Sbjct: 94 ITYQADTLFDFDKAILKPAGKEKLDDLASKIQGLNLEVVVATGYTDRIGSDKYNDRLSLR 153
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY-------AKNRRAIVFLKGC 156
RA AV Y V++GI A+R+ GK P G ++ A +RR V + G
Sbjct: 154 RAQAVKAYLVSKGIEANRIYTEGKGKRNPVTTGCNQKNRKQLIACLAPDRRVEVEVVGT 212
>gi|327393665|dbj|BAK11087.1| flagellar motor protein YiaD [Pantoea ananatis AJ13355]
Length = 405
Score = 60.2 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/127 (15%), Positives = 36/127 (28%), Gaps = 4/127 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
L S + F I P +L+ + S ++ L+ D
Sbjct: 265 AAGQLEVSDGAFGSKVIIPADKLFAEQGTVINPVGRAILARVSSAMKDVKGTILVSVFTD 324
Query: 91 ELG----SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ SS RA +V + ++ G P + + +N
Sbjct: 325 DKPVDGSRFASSYEFSFARARSVSQLLQVQLADTHVIRSEGRGDSDPLLPNDSSENRTRN 384
Query: 147 RRAIVFL 153
RR + L
Sbjct: 385 RRVEITL 391
>gi|146338211|ref|YP_001203259.1| hypothetical protein BRADO1110 [Bradyrhizobium sp. ORS278]
gi|146191017|emb|CAL75022.1| Putative flagellar motor protein MotB [Bradyrhizobium sp. ORS278]
Length = 342
Score = 60.2 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 48/118 (40%), Gaps = 12/118 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLG--------SWLEKHDCDFLIEGHAD----ELGSR 95
VFFDT ++ P Q L+++ + ++GH D
Sbjct: 222 FQSEVFFDTGQATLLPEGQQELNSVATALIDLDKQIPAEISWVLRVDGHTDVRPINSPVF 281
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA +V Y ++ G+ A R+ + + P + ++A+ +NRR + L
Sbjct: 282 KSNWELSSARAISVVQYLISLGVPAQRLVAAGFAEFQPLDTANTDEAFRRNRRIELKL 339
>gi|330948387|gb|EGH48647.1| OmpA/MotB [Pseudomonas syringae pv. pisi str. 1704B]
Length = 64
Score = 60.2 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 29/57 (50%)
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
++ L +RA +V Y ++G+ + + V G + P D + A+NRR V LK
Sbjct: 1 NMDLSQQRAQSVATYLTSQGVDQAHLSVRGAGPDQPIASNADVNGRAQNRRVEVNLK 57
>gi|313681893|ref|YP_004059631.1| ompa/motb domain protein [Sulfuricurvum kujiense DSM 16994]
gi|313154753|gb|ADR33431.1| OmpA/MotB domain protein [Sulfuricurvum kujiense DSM 16994]
Length = 177
Score = 60.2 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 70/179 (39%), Gaps = 29/179 (16%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKIS----------------------SPDTVLNES 38
M F+ + + M+ +SG + + I SP + N +
Sbjct: 1 MMKKVAFLS-ATVAMLVLSGCSSKEPAIDASANANASAGTKANGSDANSVISPVSNANVT 59
Query: 39 SLQEQFSSSVGD----SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
++ D S+ FD + IR ++ ++ +EG+ DE GS
Sbjct: 60 DANGANGANGSDGGLVSILFDYDKFDIRADMQDAMAKNALLVKG--KTIKLEGNCDEFGS 117
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ ALGL+RA +V V GISA + ++S G+ P +D + KNRR L
Sbjct: 118 DEYNFALGLKRANSVKAALVNSGISADSIAMSSLGESNPVCLEKSKDCWQKNRRVDFKL 176
>gi|94987344|ref|YP_595277.1| outer membrane protein [Lawsonia intracellularis PHE/MN1-00]
gi|94731593|emb|CAJ54956.1| outer membrane protein [Lawsonia intracellularis PHE/MN1-00]
Length = 340
Score = 60.2 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 45/123 (36%), Gaps = 2/123 (1%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHA 89
++V + + V V F S+++ +L + D + + G
Sbjct: 216 VNSVFCQEQILVTEEVVVLRGVNFAFDSFALDDTAKAILEETVRLIRANPDFNVRLLGWT 275
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G ++ L RA AV N+ V GI ++R+ GK ++ NRR
Sbjct: 276 DSTGPDAYNLRLSQERADAVKNFLVKMGIPSNRLFAKGMGKSY-QYNNATKEGRYMNRRT 334
Query: 150 IVF 152
+
Sbjct: 335 ELV 337
>gi|238755499|ref|ZP_04616838.1| Outer membrane protein and peptidoglycan-associated (lipo)protein
[Yersinia ruckeri ATCC 29473]
gi|238706255|gb|EEP98633.1| Outer membrane protein and peptidoglycan-associated (lipo)protein
[Yersinia ruckeri ATCC 29473]
Length = 92
Score = 60.2 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 30/73 (41%)
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ GH D +G + + L RA AV + G+ + + V GK P H
Sbjct: 17 NHIRLNGHTDSMGEDSYNDRLSYGRASAVADTLATIGMPRANIDVRGLGKLNPVADNHTA 76
Query: 141 DAYAKNRRAIVFL 153
A+NRR + +
Sbjct: 77 KGRAENRRVAMIV 89
>gi|163742880|ref|ZP_02150264.1| hypothetical protein RG210_12200 [Phaeobacter gallaeciensis 2.10]
gi|161383844|gb|EDQ08229.1| hypothetical protein RG210_12200 [Phaeobacter gallaeciensis 2.10]
Length = 655
Score = 60.2 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 42/125 (33%), Gaps = 14/125 (11%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE--------KHDCDFLIEGHADE-- 91
E V F S + PA + + L+ + + ++GH D+
Sbjct: 527 EGDRFVFASEVLFSPGSADLSPAGRAEIGKVAGILQAVAAAIPPEINWIIRVDGHTDDTP 586
Query: 92 ---LGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+ L RA +V Y A GI R+ +G+ P A A+NR
Sbjct: 587 LGIHPKFADNWELSQGRALSVVRYMVQALGIPPERLSANGFGEYQPVNPAPTAVARAQNR 646
Query: 148 RAIVF 152
R +
Sbjct: 647 RIELK 651
>gi|299773241|gb|ADJ38695.1| outer membrane protein P5 [Haemophilus parasuis]
gi|299773245|gb|ADJ38697.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 367
Score = 60.2 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 51/123 (41%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + G+ D +G +++ L
Sbjct: 241 AFSSDVLFDFGKANLKPAAAQTLDAAHAEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 300
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 301 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQVQ 360
Query: 155 GCR 157
G +
Sbjct: 361 GSK 363
>gi|294626797|ref|ZP_06705390.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292598913|gb|EFF43057.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 419
Score = 60.2 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 46/123 (37%), Gaps = 5/123 (4%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG--- 93
+ Q + + F + + P V++ + + +E+ ++ GH D++
Sbjct: 294 DEQADGQTRVRLSSAAMFASGGVEVEPQQRGVIAQIAAAIEQLPGRVIVVGHTDDVPVRS 353
Query: 94 -SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV-YGHDEDAYAKNRRAIV 151
+ AL RA A+ A+ + R++ T G P A+NRR +
Sbjct: 354 LRFQDNYALSAARAQALAQVLQAQLSTPGRVEATGAGDSQPIAQPVQLPANRARNRRVEI 413
Query: 152 FLK 154
+
Sbjct: 414 LFQ 416
>gi|289678321|ref|ZP_06499211.1| OmpA/MotB [Pseudomonas syringae pv. syringae FF5]
Length = 62
Score = 60.2 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L +RA +V Y ++G+ + + V G + P D + A+NRR V LK
Sbjct: 1 DLSQQRAQSVATYLTSQGVDQAHLSVRGAGPDQPIASNADVNGRAQNRRVEVNLK 55
>gi|259417800|ref|ZP_05741719.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
gi|259346706|gb|EEW58520.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
Length = 345
Score = 60.2 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 39/102 (38%), Gaps = 2/102 (1%)
Query: 54 FDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FDT+S + L L + + L+ GH D +G +IAL RRA +V
Sbjct: 241 FDTASTQMGEGPFDSLRQLAEFLDQNKSATILLVGHTDTVGGLEGNIALSRRRAISVRER 300
Query: 113 FVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
R I R++V G P E NRR L
Sbjct: 301 LTTRYGIDGGRIQVAGAGYMAPLAPNTTETGRETNRRVEAVL 342
>gi|209964174|ref|YP_002297089.1| OmpA family protein (probable proton motor, MotY) [Rhodospirillum
centenum SW]
gi|209957640|gb|ACI98276.1| OmpA family protein (probable proton motor, MotY) [Rhodospirillum
centenum SW]
Length = 355
Score = 60.2 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 1/103 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAV 109
+VFFD ++ P +VL ++ + + GHAD G + + L +RRA AV
Sbjct: 251 TVFFDWDKATLTPDAEKVLQSVAADARTGGIAALQVTGHADTSGPADYNQRLSMRRAEAV 310
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+Y +A+GI A + + G+ P V D NRR ++
Sbjct: 311 RDYLIAQGIPAGEIAIEGRGETDPLVPTADGVREPSNRRGVII 353
>gi|209968918|gb|ACJ02820.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968922|gb|ACJ02822.1| outer membrane protein P5 [Haemophilus parasuis]
gi|224714277|gb|ACN62133.1| outer membrane protein A [Haemophilus parasuis]
gi|224714281|gb|ACN62135.1| outer membrane protein A [Haemophilus parasuis]
Length = 367
Score = 60.2 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 51/123 (41%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + G+ D +G +++ L
Sbjct: 241 AFSSDVLFDFGKANLKPAAAQTLDAAHAEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 300
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 301 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQVQ 360
Query: 155 GCR 157
G +
Sbjct: 361 GSK 363
>gi|162451716|ref|YP_001614084.1| hypothetical protein sce3444 [Sorangium cellulosum 'So ce 56']
gi|161162298|emb|CAN93603.1| putative membrane protein [Sorangium cellulosum 'So ce 56']
Length = 357
Score = 60.2 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 56/140 (40%), Gaps = 3/140 (2%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQ-EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+ D + + + + + + F PA +L+N+ L
Sbjct: 98 CPTEAEVKNGYKDDDGCPDVPPVVLDGNEVKLNEKIAFVAGKPEFEPASQGLLANVAQIL 157
Query: 77 EKHDCD--FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
+ H + +++++G+ +++ L +RA AV A G+ +R++ YG +
Sbjct: 158 KDHPQIQFVEVAAYSEKVGNDAATVTLTKKRAEAVVKALTALGVEKNRVRAAGYGAHCAT 217
Query: 135 VYGHDEDAYAKNRRAIVFLK 154
G E+A KNRR + +
Sbjct: 218 DPGETEEAKEKNRRVEIKIM 237
>gi|126663141|ref|ZP_01734139.1| peptidoglycan-associated lipoprotein, OmpA family [Flavobacteria
bacterium BAL38]
gi|126624799|gb|EAZ95489.1| peptidoglycan-associated lipoprotein, OmpA family [Flavobacteria
bacterium BAL38]
Length = 520
Score = 60.2 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 55/141 (39%), Gaps = 7/141 (4%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSS----VGDSVFFDTSSYSIRPADIQVLSNLGSW 75
G + I++ DT N + Q++ + V ++++FD + +++ L+ +
Sbjct: 378 GYETKKLNIATGDTEKNIALTQKKAVVTDDTIVIENIYFDFNKSTVKKESELSLNKIVEV 437
Query: 76 -LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
+ I H D GS + L RA A + Y + +GI AS++ YG+
Sbjct: 438 LTNNANMSITINAHTDSKGSEAYNQKLSESRAKAAYQYLLKKGIPASQLTYKGYGESELL 497
Query: 135 VYGH--DEDAYAKNRRAIVFL 153
NRR +
Sbjct: 498 EKCEKCTASQDQANRRIEFKI 518
>gi|307730629|ref|YP_003907853.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003]
gi|323526963|ref|YP_004229116.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1001]
gi|307585164|gb|ADN58562.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003]
gi|323383965|gb|ADX56056.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1001]
Length = 215
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 8/119 (6%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FD ++PA + L +L S ++ + + ++ G+ D +GS + L LR
Sbjct: 94 ITYQADALFDFDKAILKPAGKEKLDDLASKIQGLNLEVVVATGYTDRIGSDKYNDRLSLR 153
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY-------AKNRRAIVFLKGC 156
RA AV Y V++GI ++R+ GK P G ++ A +RR V + G
Sbjct: 154 RAQAVKAYLVSKGIESNRIYTEGKGKRNPVTTGCNQKNRKQLIACLAPDRRVEVEVVGT 212
>gi|319951894|ref|YP_004163161.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
gi|319420554|gb|ADV47663.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
Length = 647
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 50/123 (40%), Gaps = 7/123 (5%)
Query: 38 SSLQEQFSSSVG-DSVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSR 95
+ L + + + ++FD IR ++ + + + I H D + +
Sbjct: 523 ADLGADLAKKLNLEKIYFDFDQSYIRKDAQIIMEKVIAYLNQYPNTKIRIGSHTDAIAND 582
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD-----EDAYAKNRRAI 150
+ L RRA A + Y V +GI+ASR+ +G+ + + + + NRR+
Sbjct: 583 AYNSRLSERRAKATYEYLVKKGIAASRLTFKGFGETQLNNECKNTVNCSAEKHQLNRRSE 642
Query: 151 VFL 153
+
Sbjct: 643 FIV 645
>gi|229515018|ref|ZP_04404478.1| outer membrane protein [Vibrio cholerae TMA 21]
gi|229347723|gb|EEO12682.1| outer membrane protein [Vibrio cholerae TMA 21]
Length = 212
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 56/108 (51%), Gaps = 1/108 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVF 110
+ F S SI PA + + + +L+ + ++G+A ++GS ++ L +R+ AV
Sbjct: 91 ILFANDSSSIEPAFLTQIRQMAEFLQTYPSTSIELQGYASKVGSAEHNLVLSKQRSEAVR 150
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
+ + G++ R+ + YG + V G D+ ++A+NRR + G +
Sbjct: 151 DQLLRYGVAPERVNIVGYGDSVLEVEGTDDVSHARNRRVTATVVGYKG 198
>gi|119478304|ref|ZP_01618335.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [marine gamma proteobacterium HTCC2143]
gi|119448644|gb|EAW29889.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [marine gamma proteobacterium HTCC2143]
Length = 300
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYA 108
V F T+ + + L ++ +++ F I+GH D +G R ++ L +RA A
Sbjct: 191 RVHFITAKFELTRDAKTQLDDVVRYVKADSSVTGFYIDGHTDSIGRRLYNLELSKQRAEA 250
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
V Y V+ G+ + + +G+ P + NRR + L+
Sbjct: 251 VTKYLVSNGVDEAMITTRYHGERYPVIDNSSAKNRYANRRVTLRLE 296
>gi|116048976|ref|YP_792222.1| hypothetical protein PA14_50810 [Pseudomonas aeruginosa UCBPP-PA14]
gi|296390590|ref|ZP_06880065.1| hypothetical protein PaerPAb_20651 [Pseudomonas aeruginosa PAb1]
gi|115584197|gb|ABJ10212.1| probable outer membrane protein precursor [Pseudomonas aeruginosa
UCBPP-PA14]
Length = 293
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 31/69 (44%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
L+ GH D GS+ + L RA +V F G+ ++++ G +MP
Sbjct: 210 ILVLGHTDSTGSKAVNDKLSFERAQSVAAIFRLSGLKGDQLRLKGVGSDMPRADNASAAG 269
Query: 143 YAKNRRAIV 151
A+NRR V
Sbjct: 270 RAQNRRVEV 278
>gi|15596245|ref|NP_249739.1| outer membrane protein precursor [Pseudomonas aeruginosa PAO1]
gi|218892990|ref|YP_002441859.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
LESB58]
gi|254234184|ref|ZP_04927507.1| hypothetical protein PACG_00018 [Pseudomonas aeruginosa C3719]
gi|254239405|ref|ZP_04932727.1| hypothetical protein PA2G_00018 [Pseudomonas aeruginosa 2192]
gi|313105999|ref|ZP_07792260.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
39016]
gi|9946962|gb|AAG04437.1|AE004537_2 probable outer membrane protein precursor [Pseudomonas aeruginosa
PAO1]
gi|126166115|gb|EAZ51626.1| hypothetical protein PACG_00018 [Pseudomonas aeruginosa C3719]
gi|126192783|gb|EAZ56846.1| hypothetical protein PA2G_00018 [Pseudomonas aeruginosa 2192]
gi|218773218|emb|CAW29030.1| probable outer membrane protein precursor [Pseudomonas aeruginosa
LESB58]
gi|310878762|gb|EFQ37356.1| putative outer membrane protein precursor [Pseudomonas aeruginosa
39016]
Length = 293
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 31/69 (44%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
L+ GH D GS+ + L RA +V F G+ ++++ G +MP
Sbjct: 210 ILVLGHTDSTGSKAVNDKLSFERAQSVAAIFRLSGLKGDQLRLKGVGSDMPRADNASAAG 269
Query: 143 YAKNRRAIV 151
A+NRR V
Sbjct: 270 RAQNRRVEV 278
>gi|86132613|ref|ZP_01051206.1| OmpA family protein [Dokdonia donghaensis MED134]
gi|85816855|gb|EAQ38040.1| OmpA family protein [Dokdonia donghaensis MED134]
Length = 650
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 57/126 (45%), Gaps = 7/126 (5%)
Query: 35 LNESSLQEQFSSSVG-DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADEL 92
L E + + + + + ++FD + IRP L+ + S +++ + + H D
Sbjct: 522 LTEVGVGDDLAKLLNLNPIYFDYNKSDIRPDAALELTKVISAMKQVPEMVINVRSHTDSR 581
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH-----DEDAYAKNR 147
G + +++L RRA + Y ++RGI+A R+ YG+ E+ + NR
Sbjct: 582 GKDSYNLSLSDRRAKSTVAYIISRGINAERISGNGYGETQLVNGCGNNSDCTEEQHQLNR 641
Query: 148 RAIVFL 153
R+ +
Sbjct: 642 RSEFIV 647
>gi|325274583|ref|ZP_08140640.1| peptidoglycan-associated lipoprotein [Pseudomonas sp. TJI-51]
gi|324100285|gb|EGB98074.1| peptidoglycan-associated lipoprotein [Pseudomonas sp. TJI-51]
Length = 146
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 61/117 (52%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+ G +T + SL E+ + + +F+ S ++P ++ L L
Sbjct: 30 AGEGAAVDPNAGYGANTGAVDGSLSEEAALRAITTFYFEYDSSDLKPEAMRALDVHAKDL 89
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
+ + ++EG+ DE G+R ++ALG RRA AV Y V +G+S ++++V SYG+E P
Sbjct: 90 KANGNRVVLEGNTDERGTREYNMALGERRAKAVQRYLVLQGVSPAQLEVVSYGEERP 146
>gi|163732607|ref|ZP_02140052.1| OmpA family domain protein [Roseobacter litoralis Och 149]
gi|161393967|gb|EDQ18291.1| OmpA family domain protein [Roseobacter litoralis Och 149]
Length = 319
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHD 139
+ GH D G+ ++I+L RA +V + G++ ++ G P
Sbjct: 242 IRIALVGHTDTTGALATNISLSRARAQSVRARLIEVYGVAPDKVDAEGMGYLAPIATNLT 301
Query: 140 EDAYAKNRRAIVFLKGCR 157
++ +NRR V L +
Sbjct: 302 DEGRRQNRRVEVVLLNTQ 319
>gi|163740457|ref|ZP_02147851.1| OmpA domain protein [Phaeobacter gallaeciensis 2.10]
gi|161386315|gb|EDQ10690.1| OmpA domain protein [Phaeobacter gallaeciensis 2.10]
Length = 326
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 2/136 (1%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
G D T + +V + F+T + ++ L+ L + ++
Sbjct: 188 GTDAAPTVALPLIGAAELITGLRGNGRAVLADLEFETGAVTLGAKPYDSLAALAEFLIQN 247
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYG 137
D D L+ GH D +GS +IA+ RRA AV +A + +R+ V G P
Sbjct: 248 PDFDVLLVGHTDTVGSLEQNIAISERRADAVRRRLLADSAVGGARVAVAGAGFMAPLTTN 307
Query: 138 HDEDAYAKNRRAIVFL 153
+ NRR V L
Sbjct: 308 LTPEGREANRRVEVVL 323
>gi|146300540|ref|YP_001195131.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
UW101]
gi|146154958|gb|ABQ05812.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
Length = 303
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 3/132 (2%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIR---PADIQVLSNLGSWLEKHDCD 82
+ V +E S + ++ ++ F+T+ S +V +
Sbjct: 172 ETADTTSAVTDEWSALKDKINADPLTLHFNTNKSSFNLTNDEKQKVSDISKYLENVKNAS 231
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
LI GH+D +G+R +I L +RA NY + GI ASR++ S G + P+ +
Sbjct: 232 VLIVGHSDNVGNRELNIVLAQKRADFTKNYLIKNGIEASRIETESKGPDEPAGDNTTAEG 291
Query: 143 YAKNRRAIVFLK 154
A NRR ++ +K
Sbjct: 292 KASNRRTVITIK 303
>gi|289676756|ref|ZP_06497646.1| OmpA/MotB [Pseudomonas syringae pv. syringae FF5]
gi|330898576|gb|EGH29995.1| OmpA/MotB [Pseudomonas syringae pv. japonica str. M301072PT]
gi|330981564|gb|EGH79667.1| OmpA/MotB [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 300
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++GH+D G+R ++ L RRA AV +YF A+GI ++ + +G+ P +E
Sbjct: 207 NRIELDGHSDNSGNRLTNRDLSRRRALAVMDYFKAQGIPEQQITLRFHGERYPLAPNTNE 266
Query: 141 DAYAKNRRAIVFLK 154
A+NRR V L+
Sbjct: 267 ANRARNRRVNVHLE 280
>gi|308270508|emb|CBX27120.1| hypothetical protein N47_A11490 [uncultured Desulfobacterium sp.]
Length = 200
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 68/144 (47%), Gaps = 8/144 (5%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVG-------DSVFFDTSSYSIRPADIQVLSN 71
+ KI +P L + ++ FS ++ + + + P +++ +
Sbjct: 57 ATTITDSNKIPAPPIKLEQKTIDTLFSEALSIQPKQPFHFILYFKKDTLLTPDSNKLIPD 116
Query: 72 LGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
+ +++ + + GH D LGS++ ++AL +RA +V + + +G+ A+ + TS+GK
Sbjct: 117 IIKSIQERNSTDITVVGHTDTLGSKDYNMALSRKRADSVKDLLIDQGVEANNINTTSHGK 176
Query: 131 EMPSVYGHDEDAYAKNRRAIVFLK 154
E P + D + NRR V ++
Sbjct: 177 ENPLIKTEDNVSEPGNRRVEVIVR 200
>gi|299773243|gb|ADJ38696.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 51/123 (41%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + G+ D +G +++ L
Sbjct: 239 AFSSDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 298
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 299 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQVQ 358
Query: 155 GCR 157
G +
Sbjct: 359 GSK 361
>gi|126734277|ref|ZP_01750024.1| OmpA/MotB [Roseobacter sp. CCS2]
gi|126717143|gb|EBA14007.1| OmpA/MotB [Roseobacter sp. CCS2]
Length = 527
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/137 (24%), Positives = 58/137 (42%), Gaps = 5/137 (3%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE---KH 79
+ ++ Q + + + S F+T S + I+ + L + +E
Sbjct: 382 TAAVEPDFDGAQYSDMMQQLRSADRLSTSFRFNTGSSVLDVESIRNIEELAARMEAGEFD 441
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA--RGISASRMKVTSYGKEMPSVYG 137
+ L+ G AD +G R + AL RA AV N +A R++ SYG+ +P
Sbjct: 442 GLEVLLVGFADSVGERARNTALAQNRADAVRNVLADTLSRENAQRLRPISYGELLPLSCN 501
Query: 138 HDEDAYAKNRRAIVFLK 154
DE +NRR V+L+
Sbjct: 502 EDEVGRERNRRVEVWLR 518
>gi|330965346|gb|EGH65606.1| OmpA family protein [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 451
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 50/147 (34%), Gaps = 8/147 (5%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFS---SSVGDSVFFDTSSYSIRPADIQVLS 70
+++ SG + + + + + + + F S + Q L
Sbjct: 307 AIVAKSGFVSQTVQALKVPPTAQMPADYQALARKAERLSVNFRFAQGSARLDNKAQQDLK 366
Query: 71 NLGSWLEKH---DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
+ +L+ + + G D + L RA AV + G++ +
Sbjct: 367 RVAEYLKASGKLNQQVTLVGFGDAKSDPARAALLSRLRAMAVRRELIKSGVTFRDIL--G 424
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G EMP +D KNRR V+++
Sbjct: 425 LGDEMPVATNDIDDGRIKNRRVEVWVQ 451
>gi|262275324|ref|ZP_06053134.1| outer membrane protein [Grimontia hollisae CIP 101886]
gi|262220569|gb|EEY71884.1| outer membrane protein [Grimontia hollisae CIP 101886]
Length = 197
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/184 (17%), Positives = 68/184 (36%), Gaps = 25/184 (13%)
Query: 1 MQ----YSTIFIILSAITMMS--------------------ISGIDNLDTKISSPDTVLN 36
M+ S+I I+L ++ + I+ D D +
Sbjct: 1 MKHVLLISSILIVLGGCSLSADEPPLAEQRSDLFDADSDGVINARDLCDNTPQEAVIDND 60
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSR 95
S+ + F S + PA + L + +L+ + ++GH GS
Sbjct: 61 GCPTYLLLESNNSLRIQFANDSAIVEPAYREALDKMAGFLKLYPETFLELQGHTSSPGSD 120
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+ + L ++RA AV + + +G+ R+ + G+ + + E NRR + +KG
Sbjct: 121 DYNQNLSIQRAKAVQAHLIEKGVPIDRLTLIGLGEGDLMLADNTETTQFVNRRVVGRVKG 180
Query: 156 CRAN 159
+ +
Sbjct: 181 FKGD 184
>gi|209968910|gb|ACJ02816.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968944|gb|ACJ02833.1| outer membrane protein P5 [Haemophilus parasuis]
gi|224714273|gb|ACN62131.1| outer membrane protein A [Haemophilus parasuis]
gi|224714279|gb|ACN62134.1| outer membrane protein A [Haemophilus parasuis]
Length = 365
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 51/123 (41%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + G+ D +G +++ L
Sbjct: 239 AFSSDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 298
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 299 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQVQ 358
Query: 155 GCR 157
G +
Sbjct: 359 GSK 361
>gi|299773235|gb|ADJ38692.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 51/123 (41%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + G+ D +G +++ L
Sbjct: 239 AFSSDVLFDFGKANLKPASAQTLDAAHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 298
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 299 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQVQ 358
Query: 155 GCR 157
G +
Sbjct: 359 GSK 361
>gi|299773229|gb|ADJ38689.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 51/123 (41%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + G+ D +G +++ L
Sbjct: 239 AFSSDVLFDFGKANLKPASAQTLDAAHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 298
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 299 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKPLIVCLAPDRRVEIQVQ 358
Query: 155 GCR 157
G +
Sbjct: 359 GSK 361
>gi|296533201|ref|ZP_06895824.1| type VI secretion system OmpA/MotB family protein [Roseomonas
cervicalis ATCC 49957]
gi|296266471|gb|EFH12473.1| type VI secretion system OmpA/MotB family protein [Roseomonas
cervicalis ATCC 49957]
Length = 162
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 45/137 (32%), Gaps = 6/137 (4%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLI 85
++ + ++ + S + + S ++ + +L+ +G + + D I
Sbjct: 24 APEIAQGLVTVTGDVQRTMVRIQGSGMYASGSATLNERFVPLLTRIGEAVREEDAGRTDI 83
Query: 86 EGHADELGS----RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDE 140
GH+D S+ L RA A A+R + G P
Sbjct: 84 LGHSDNQPIRTLRFPSNFHLSQARAEAALEVIRRASGLEAARFQAEGRGDAEPVADNRTA 143
Query: 141 DAYAKNRRAIVFLKGCR 157
+ NRR V + R
Sbjct: 144 EGREANRRIEVVVLNRR 160
>gi|129142|sp|P24755|OMPA_SEROD RecName: Full=Outer membrane protein A; AltName: Full=Outer
membrane protein II
gi|152839|gb|AAA26561.1| outer membrane protein II [Serratia odorifera]
Length = 243
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 54/127 (42%), Gaps = 13/127 (10%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDCDFLIEGHADELGSRNSS 98
E ++ V F+++ S++P Q L L + ++ D ++ G+ D +G ++
Sbjct: 116 ETKLFTLKSDVLFNSAKSSLKPEGQQALDQLYTQLSSMDPKDGSVVVLGYTDPVGKDAAN 175
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS----------VYGHDEDAYAKNRR 148
L RA +V +Y V++GI A ++ G+ + A NRR
Sbjct: 176 QKLSEARARSVVDYLVSKGIPADKISARGMGEADQVTDSCGYKNGRATKAQIECLAPNRR 235
Query: 149 AIVFLKG 155
+ +KG
Sbjct: 236 VEIEVKG 242
>gi|86133957|ref|ZP_01052539.1| OmpA family protein [Polaribacter sp. MED152]
gi|85820820|gb|EAQ41967.1| OmpA family protein [Polaribacter sp. MED152]
Length = 370
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 53/125 (42%), Gaps = 5/125 (4%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNS 97
++ + + +D SS ++ Q++ + K IE H D G++
Sbjct: 246 KAVDCSLIDNTPLPINWDFSSATLNEGAKQIIDARLLPIVKDGVAVFIESHTDMRGTKRD 305
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD-----EDAYAKNRRAIVF 152
+ L RRA AV +Y +++GI+A+++ +G+ D E +A NRR
Sbjct: 306 NQELSDRRAKAVTDYLISKGINATQLYAKGFGETRLLNKCADGVVCSESEHAVNRRTTFR 365
Query: 153 LKGCR 157
+ +
Sbjct: 366 VVNQK 370
>gi|320107209|ref|YP_004182799.1| OmpA/MotB domain-containing protein [Terriglobus saanensis SP1PR4]
gi|319925730|gb|ADV82805.1| OmpA/MotB domain protein [Terriglobus saanensis SP1PR4]
Length = 257
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/132 (31%), Positives = 63/132 (47%), Gaps = 2/132 (1%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-C 81
+ ++ + + + +F +V D VFFD SY +R + S+L H
Sbjct: 125 RVPVAPTADTSNQGDMGPEAEFHQNVQD-VFFDYDSYDLRLDAGALAQRAASYLAAHPAI 183
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
+I G+ DE GS ++ALG RA A V G+S +R++V SYGKE +E
Sbjct: 184 KVVIGGYCDERGSAEYNLALGENRANAAKTALVTAGVSPNRLRVISYGKEKQFCTEQNET 243
Query: 142 AYAKNRRAIVFL 153
Y +NRRA L
Sbjct: 244 CYQQNRRAQFSL 255
>gi|254779211|ref|YP_003057316.1| flagellar motor protein MotB [Helicobacter pylori B38]
gi|254001122|emb|CAX29077.1| Chemotaxis protein MotB (Motility protein B) [Helicobacter pylori
B38]
Length = 257
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 50/152 (32%), Gaps = 7/152 (4%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS-SYSIRPADIQV 68
+++ + S I+ + + + ++ F+ + S +I +
Sbjct: 82 MASESSKPASQNTETKATIARKGEGSVLEQIDQGSVLKLPSNLLFENATSDAINQDMMLY 141
Query: 69 LSNLGSWLEKHDCDFLIE--GHADELG----SRNSSIALGLRRAYAVFNYFVARGISASR 122
L + ++K I G D S L RAY V + G+ ++
Sbjct: 142 LERIAKIIQKLPKRVHINVRGFTDNTPLTKTRFKSHYELAANRAYRVMKVLMQYGVDPNQ 201
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ +SYG P + KN R +F
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEIFFS 233
>gi|126734135|ref|ZP_01749882.1| hypothetical protein RCCS2_08249 [Roseobacter sp. CCS2]
gi|126717001|gb|EBA13865.1| hypothetical protein RCCS2_08249 [Roseobacter sp. CCS2]
Length = 536
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 45/127 (35%), Gaps = 14/127 (11%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW--------LEKHDCDFLIEGHADEL 92
E V F S ++ PA ++N+ E D ++GH D +
Sbjct: 407 VEGDRFIFNSEVLFQPGSATLSPAGEAEIANIADILRSIAADIPEGIDWVIRVDGHTDNV 466
Query: 93 GS-----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ L RA +V + GI R+ +G+ P + +A A+N
Sbjct: 467 PIGSNSRFADNWELSQARALSVVRFMSEDLGIDPRRLAANGFGEFQPLNPLNTAEARAQN 526
Query: 147 RRAIVFL 153
RR + L
Sbjct: 527 RRIELKL 533
>gi|312270711|gb|ADQ55756.1| OmpA [Haemophilus parasuis]
gi|312270713|gb|ADQ55757.1| OmpA [Haemophilus parasuis]
Length = 365
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 51/123 (41%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + G+ D +G +++ L
Sbjct: 239 AFSSDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 298
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 299 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQVQ 358
Query: 155 GCR 157
G +
Sbjct: 359 GSK 361
>gi|49083180|gb|AAT50966.1| PA1048 [synthetic construct]
Length = 294
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 31/69 (44%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
L+ GH D GS+ + L RA +V F G+ ++++ G +MP
Sbjct: 210 ILVLGHTDSTGSKAVNDKLSFERAQSVAAIFRLSGLKGDQLRLKGVGSDMPRADNASAAG 269
Query: 143 YAKNRRAIV 151
A+NRR V
Sbjct: 270 RAQNRRVEV 278
>gi|15639711|ref|NP_219161.1| flagellar motor protein MotB [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189025949|ref|YP_001933721.1| flagellar motor protein MotB [Treponema pallidum subsp. pallidum
SS14]
gi|3024159|sp|O07887|MOTB_TREPA RecName: Full=Motility protein B; AltName: Full=Chemotaxis protein
MotB
gi|2196896|gb|AAB61254.1| MotB [Treponema pallidum]
gi|3323025|gb|AAC65689.1| flagellar motor rotation protein (motB) [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189018524|gb|ACD71142.1| flagellar motor rotation protein [Treponema pallidum subsp.
pallidum SS14]
gi|291060088|gb|ADD72823.1| chemotaxis protein MotB [Treponema pallidum subsp. pallidum str.
Chicago]
Length = 238
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 43/127 (33%), Gaps = 8/127 (6%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIR-PADIQVLSNLGSWLEKHDC---DFLIEGHAD 90
+ +S + S+ FF S + + L + +L H F IEGH D
Sbjct: 106 IAVTSDERGLVISLTSDSFFYPGSSDLNVEESREALLRVAQFLSDHALAGRRFRIEGHTD 165
Query: 91 ELGSR----NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ + L RRA V +Y G +R + Y + A N
Sbjct: 166 SVEVPEDGSTDNWELSTRRAVRVLHYLTDFGAQENRFSLAGYADTRAKFSNESPEGRAYN 225
Query: 147 RRAIVFL 153
RR + +
Sbjct: 226 RRVDIVI 232
>gi|46251334|gb|AAS84615.1| outer membrane protein [Helicobacter pylori]
Length = 147
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 56/128 (43%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
A+ +S + + + S ++ S++FD Y I+ +D + L
Sbjct: 19 AVQSAPVSTETAQEKQEPKQEPAPVVEEKPAVESGTIIASIYFDFDKYEIKESDQETLDE 78
Query: 72 LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
+ +++ L+EG+ DE GS + ALG++R +V N V +G+ +K S+G+
Sbjct: 79 IVQKAKENHMQVLLEGNTDEFGSSEYNQALGVKRTLSVKNALVIKGVEKDMIKTISFGET 138
Query: 132 MPSVYGHD 139
P
Sbjct: 139 KPKCTQKT 146
>gi|213967029|ref|ZP_03395179.1| OmpA family protein [Pseudomonas syringae pv. tomato T1]
gi|301385214|ref|ZP_07233632.1| OmpA family protein [Pseudomonas syringae pv. tomato Max13]
gi|302059607|ref|ZP_07251148.1| OmpA family protein [Pseudomonas syringae pv. tomato K40]
gi|302130155|ref|ZP_07256145.1| OmpA family protein [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|213928351|gb|EEB61896.1| OmpA family protein [Pseudomonas syringae pv. tomato T1]
Length = 447
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 48/147 (32%), Gaps = 5/147 (3%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS 70
+ + K+ + + + + + + F S + Q L
Sbjct: 303 AIVAQSGFVSQTVQALKVPPTAQMPADYQALARKAERLSVNFRFAQGSAKLDNKAQQDLK 362
Query: 71 NLGSWLEKH---DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
+ +L+ + + G D + L RA AV + G++ +
Sbjct: 363 RVAEYLKASGKLNQQVTLVGFGDAKSDPARAALLSRLRAMAVRRELIKSGVTFRDIL--G 420
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G EMP +D KNRR V+++
Sbjct: 421 LGDEMPVATNDIDDGRIKNRRVEVWVQ 447
>gi|149191044|ref|ZP_01869304.1| putative outer membrane protein [Vibrio shilonii AK1]
gi|148835072|gb|EDL52049.1| putative outer membrane protein [Vibrio shilonii AK1]
Length = 207
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 66/141 (46%), Gaps = 4/141 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSS---SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+ D I++P+ ++ EQ+ ++ + FD +S I+P +S + +L++
Sbjct: 53 NARDLCIATPEGAALDNDGCEQYVDVSNTMALRILFDNASTYIKPVFQTQISQMADFLKE 112
Query: 79 HD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+ I+G+A +G+ ++ L RA V + GI+ R+ + YG P G
Sbjct: 113 YPDTTIEIQGYASVVGNPEKNLVLSKNRAEVVREAIINNGIAPERLTIVGYGDTQPEELG 172
Query: 138 HDEDAYAKNRRAIVFLKGCRA 158
E A+A NR+ + + G +
Sbjct: 173 DTEFAHAMNRKVVASVVGYKG 193
>gi|209968906|gb|ACJ02814.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968938|gb|ACJ02830.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968940|gb|ACJ02831.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968948|gb|ACJ02835.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968950|gb|ACJ02836.1| outer membrane protein P5 [Haemophilus parasuis]
gi|209968952|gb|ACJ02837.1| outer membrane protein P5 [Haemophilus parasuis]
gi|312270695|gb|ADQ55748.1| OmpA [Haemophilus parasuis]
gi|312270697|gb|ADQ55749.1| OmpA [Haemophilus parasuis]
gi|312270699|gb|ADQ55750.1| OmpA [Haemophilus parasuis]
gi|312270701|gb|ADQ55751.1| OmpA [Haemophilus parasuis]
gi|312270703|gb|ADQ55752.1| OmpA [Haemophilus parasuis]
gi|312270705|gb|ADQ55753.1| OmpA [Haemophilus parasuis]
gi|312270707|gb|ADQ55754.1| OmpA [Haemophilus parasuis]
gi|312270709|gb|ADQ55755.1| OmpA [Haemophilus parasuis]
Length = 365
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 51/123 (41%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + G+ D +G +++ L
Sbjct: 239 AFSSDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 298
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 299 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQVQ 358
Query: 155 GCR 157
G +
Sbjct: 359 GSK 361
>gi|58040218|ref|YP_192182.1| Outer membrane protein [Gluconobacter oxydans 621H]
gi|58002632|gb|AAW61526.1| Outer membrane protein [Gluconobacter oxydans 621H]
Length = 379
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 7/110 (6%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRN------SSIALGLR 104
VFFD + ++++ + G+ D + ++ L R
Sbjct: 270 VFFDWDKSDLTGRAREIVAQAAQASTHVQTTRIEVNGYTDNSAAHPGPRGEKYNLGLSNR 329
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RA +V + G+ A+ + + YG+ P V +NRR + LK
Sbjct: 330 RASSVKAELIRDGVPAAAIDIHGYGESKPLVPTGPNTREPQNRRVEIILK 379
>gi|315586519|gb|ADU40900.1| flagellar motor protein MotB [Helicobacter pylori 35A]
Length = 255
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 51/152 (33%), Gaps = 7/152 (4%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS-SYSIRPADIQV 68
+++ + S I+ + + + ++ F+ + S SI +
Sbjct: 82 MASESSKPASQNTETKATIARKGEGSVLEQIDQGSILKLPSNLLFENATSDSINQDMMLY 141
Query: 69 LSNLGSWLEKHDCDFLIEGHA---DELGS---RNSSIALGLRRAYAVFNYFVARGISASR 122
L + ++K I D + S L RAY V + G++ ++
Sbjct: 142 LERIAKIIQKLPKRVHINVRGFTDDTPLTKTRFKSHYELAANRAYRVMKVLIQYGVNPNQ 201
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ +SYG P + KN R +F
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEIFFS 233
>gi|260769131|ref|ZP_05878064.1| outer membrane protein [Vibrio furnissii CIP 102972]
gi|260614469|gb|EEX39655.1| outer membrane protein [Vibrio furnissii CIP 102972]
Length = 208
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 63/138 (45%), Gaps = 1/138 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD- 80
D ++ + S + F +S +I P + + + +L+ +
Sbjct: 57 DKCPDTPAASQIDNEGCGTAIKSSHLQKLHILFANNSSTIPPVFMNQIRQMADFLKLYPE 116
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++G+A ++G + ++AL +R+ AV + G++ R+++ YG + +V G D+
Sbjct: 117 ASIELQGYASKVGKADHNLALSKQRSEAVRLQLLRFGVTPKRIRIVGYGDTVLAVNGEDQ 176
Query: 141 DAYAKNRRAIVFLKGCRA 158
++A+NRR + G +
Sbjct: 177 VSHAQNRRVTASVVGFKG 194
>gi|312270729|gb|ADQ55765.1| OmpA [Haemophilus parasuis]
Length = 365
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 51/123 (41%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + G+ D +G +++ L
Sbjct: 239 AFSSDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 298
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 299 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQVQ 358
Query: 155 GCR 157
G +
Sbjct: 359 GSK 361
>gi|254495661|ref|ZP_05108581.1| outer membrane protein [Legionella drancourtii LLAP12]
gi|254355112|gb|EET13727.1| outer membrane protein [Legionella drancourtii LLAP12]
Length = 235
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 42/111 (37%), Gaps = 1/111 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNSSIA 100
+ + ++ +F S + + + L N+ + + G D +G+ +
Sbjct: 102 DTMTLNIPTDKYFMFESPRLNEINYKGLQNIIALLRLYPESHVYVAGFTDNVGTEDHKKR 161
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
L +A ++ Y A GI A R+K YG + A NRR +
Sbjct: 162 LSQAQAESMMTYLWANGIQAQRLKPEGYGDKNTVADNALIHGSAMNRRIEI 212
>gi|149200848|ref|ZP_01877823.1| OmpA family protein [Roseovarius sp. TM1035]
gi|149145181|gb|EDM33207.1| OmpA family protein [Roseovarius sp. TM1035]
Length = 220
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 4/119 (3%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNS 97
L +F+S V +V F +S + L W+ + F + GH D +GS +
Sbjct: 59 DLANRFASEVMSTVNFAFNSAELDAGARDTLREQAQWIRQFPEVRFRVYGHTDAVGSDSY 118
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVT-SYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+ +LG+RRA AV + ++GIS +R++ S+G+ P + + NRR + + G
Sbjct: 119 NKSLGMRRAQAVVAFLTSQGISRARLEAVASFGETQPLIVTQGRERR--NRRTVTEVSG 175
>gi|83953282|ref|ZP_00962004.1| OmpA domain protein [Sulfitobacter sp. NAS-14.1]
gi|83842250|gb|EAP81418.1| OmpA domain protein [Sulfitobacter sp. NAS-14.1]
Length = 317
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 51/137 (37%), Gaps = 6/137 (4%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVF----FDTSSYSIRPADIQVLSNLGSWLEK 78
DT+ +PD S + G V F T + ++ + L+NL + L+
Sbjct: 177 AEDTQALAPDAPAQSQSEMAAALQNTGHVVLAALDFGTGTAALGQGEFDALANLAAVLKD 236
Query: 79 HD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVY 136
++ GH D +G ++IAL RA AV + A R++ G P
Sbjct: 237 QPDLRIVLVGHTDSVGGLQNNIALSRSRAAAVRRRLITAHGIAGDRIEAQGMGYLSPIAS 296
Query: 137 GHDEDAYAKNRRAIVFL 153
+ NRR L
Sbjct: 297 NQTKAGRDANRRVEAVL 313
>gi|242309734|ref|ZP_04808889.1| chemotaxis protein motB [Helicobacter pullorum MIT 98-5489]
gi|239523735|gb|EEQ63601.1| chemotaxis protein motB [Helicobacter pullorum MIT 98-5489]
Length = 258
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 47/132 (35%), Gaps = 8/132 (6%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPA-DIQVLSNLGSWLEKHDCDFLIEGH 88
+ + ++ + + + F++ S ++ + I L + L + LI+
Sbjct: 107 ANGPAVEFEEAEKGIIIRIPEDLLFESGSATLSNSNGITFLKRISLELNHLPKEILIKAI 166
Query: 89 ADELGSRNSSIAL-------GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
+ A + R V N +++GI R+ G+ P +
Sbjct: 167 GHTDNTPMKKNATFADNLELSIARGVNVANLLISQGIDKERIIGGGEGEFSPIANNDIPE 226
Query: 142 AYAKNRRAIVFL 153
AKNRR +++
Sbjct: 227 LRAKNRRVDLYV 238
>gi|27381973|ref|NP_773502.1| flagellar motor protein MotB [Bradyrhizobium japonicum USDA 110]
gi|27355143|dbj|BAC52127.1| motB [Bradyrhizobium japonicum USDA 110]
Length = 445
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 50/136 (36%), Gaps = 9/136 (6%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI 85
+ ++E S+ D F S RP I+V+ +G L K ++
Sbjct: 311 AGAGPAAEVRQVEEGLLVSLTDDTSFGMFAVGSAEPRPELIRVIDKIGPLLMKRQGMIIV 370
Query: 86 EGHADELGSR---NSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDED 141
GH D + + L RA + V G+ A R++ V Y P +
Sbjct: 371 RGHTDNRPYKSETYDNWRLSTARAQMAYYMLVRSGVDAQRIEHVEGYADRRPKLQNDPAA 430
Query: 142 AYAKNRRAIVFLKGCR 157
A+NRR + ++ R
Sbjct: 431 --AQNRRIEILIREKR 444
>gi|118588924|ref|ZP_01546331.1| hypothetical protein SIAM614_12768 [Stappia aggregata IAM 12614]
gi|118438253|gb|EAV44887.1| hypothetical protein SIAM614_12768 [Stappia aggregata IAM 12614]
Length = 234
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 52/138 (37%), Gaps = 8/138 (5%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
D + + L ++ V F+ +S + P+ L +
Sbjct: 94 VAVSQDGAKSDGGETEQTLVVDPETNAIDAAFNLLVSFEYASARLSPSAQANLREFAKGI 153
Query: 77 EKHD---CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
D F+IEGH D +GS + + L RA AV + V G+S R+K +YG+ P
Sbjct: 154 NDPDLAKATFVIEGHTDGIGSTSYNQRLSEDRAQAVTQFLVNLGVSRDRLKTVAYGETRP 213
Query: 134 -SVYGHDEDAYAKNRRAI 150
+D NRR
Sbjct: 214 KVADVNDPA----NRRVE 227
>gi|254506228|ref|ZP_05118371.1| outer membrane protein [Vibrio parahaemolyticus 16]
gi|219550708|gb|EED27690.1| outer membrane protein [Vibrio parahaemolyticus 16]
Length = 203
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
D + + + S + + F S ++P + + L +LE++
Sbjct: 52 DLCPQTPARSEIDNDGCGTYINTSEKIDLHILFANDSDVVQPIFMTQIRELADFLEEYPS 111
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++G+A ++G + ++ L RRA AV N + + A R+ + +G SV G DE
Sbjct: 112 TTVELQGYASKVGRPDYNLELSKRRAEAVENLLLDYQLDADRVTIVGFGDTNLSVEGDDE 171
Query: 141 DAYAKNRRAIVFLKGCRA 158
A+A+NR+ + + G +
Sbjct: 172 QAHAQNRKVVASVIGHKG 189
>gi|325286038|ref|YP_004261828.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
gi|324321492|gb|ADY28957.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
Length = 305
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 39/78 (50%)
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ + GH D G R ++I LGL+RA Y GIS S++ +S G + P
Sbjct: 228 KVEGAMCNVVGHTDNTGDRTTNIGLGLKRAEFAKEYLTNNGISPSKINTSSKGPDEPIAT 287
Query: 137 GHDEDAYAKNRRAIVFLK 154
E+ A+NRR ++ LK
Sbjct: 288 NDTEEGKAQNRRTVITLK 305
>gi|299773247|gb|ADJ38698.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 369
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 51/123 (41%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + G+ D +G +++ L
Sbjct: 243 AFSSDVLFDFGKANLKPAAAQTLDAAHAEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 302
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 303 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDALKARKSLIVCLAPDRRVEIQVQ 362
Query: 155 GCR 157
G +
Sbjct: 363 GSK 365
>gi|209968920|gb|ACJ02821.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 51/123 (41%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + G+ D +G +++ L
Sbjct: 239 AFSSDVLFDFGKANLKPASAQTLDAAHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 298
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 299 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQVQ 358
Query: 155 GCR 157
G +
Sbjct: 359 GSK 361
>gi|150005847|ref|YP_001300591.1| OmpA family outer membrane protein [Bacteroides vulgatus ATCC 8482]
gi|149934271|gb|ABR40969.1| outer membrane protein, OmpA family [Bacteroides vulgatus ATCC
8482]
Length = 239
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 55/144 (38%), Gaps = 12/144 (8%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW--L 76
+ + + + + V + + LQ + + F+T + ++ LS +
Sbjct: 79 AAEEAAQIQGAQVEQVTDNNGLQA-VKVTFDSGILFNTGNAALSAQAKSALSKFANNVLN 137
Query: 77 EKHDCDFLIEGHADEL--------GSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTS 127
+ D D I G+ D S ++ L RA +V +Y + G+S S++ V
Sbjct: 138 QNRDMDVSIYGYTDNQGWRNSTAEQSIQKNLNLSQERAQSVASYLLGCGVSNSQIKSVEG 197
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIV 151
G+ P + +NRR V
Sbjct: 198 LGQADPIGNNDTAEGRQQNRRVEV 221
>gi|332290734|ref|YP_004429343.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332168820|gb|AEE18075.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 293
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 60/146 (41%), Gaps = 8/146 (5%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+++ + I+ D +N S+ D V F + SY+I ++L +
Sbjct: 121 VTLALVTSLKKEVGINDTDIEINVEKGV--VFISLSDKVLFKSGSYNITSRAEEILGKVA 178
Query: 74 SWLE-KHDCDFLIEGHADELGSR-----NSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
+ + K + + L+EGH D + + L +RA A+ V G + +++
Sbjct: 179 TVINGKPNFEALVEGHTDNVPYNKGGVLIDNWDLSAKRATAIVRKLVDLGANPAQLIAAG 238
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +P V + + NRR +++
Sbjct: 239 RSEFVPLVDNSTAENRSTNRRTKIYV 264
>gi|312270731|gb|ADQ55766.1| OmpA [Haemophilus parasuis]
gi|312270733|gb|ADQ55767.1| OmpA [Haemophilus parasuis]
Length = 367
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 51/123 (41%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + G+ D +G +++ L
Sbjct: 241 AFSSDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 300
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 301 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQVQ 360
Query: 155 GCR 157
G +
Sbjct: 361 GSK 363
>gi|254786950|ref|YP_003074379.1| OmpA/MotB domain-containing protein [Teredinibacter turnerae T7901]
gi|237683752|gb|ACR11016.1| OmpA/MotB domain protein [Teredinibacter turnerae T7901]
Length = 311
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 37/80 (46%)
Query: 72 LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
L +K F+I+ HA G+R ++ L RA V +Y V GI S++ V +G+
Sbjct: 206 LLVKHDKAINQFIIDAHASAEGTRIDNLELSKTRADLVRDYLVGHGIPESQLVVRWHGER 265
Query: 132 MPSVYGHDEDAYAKNRRAIV 151
P AKNRR V
Sbjct: 266 YPVASNDSSSGRAKNRRVTV 285
>gi|209968908|gb|ACJ02815.1| outer membrane protein P5 [Haemophilus parasuis]
gi|224714283|gb|ACN62136.1| outer membrane protein A [Haemophilus parasuis]
Length = 369
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 51/123 (41%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + G+ D +G +++ L
Sbjct: 243 AFSSDVLFDFGKANLKPAAAQTLDAAHAEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 302
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 303 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQVQ 362
Query: 155 GCR 157
G +
Sbjct: 363 GSK 365
>gi|149370425|ref|ZP_01890114.1| putative flagellar motor protein MotB [unidentified eubacterium
SCB49]
gi|149355976|gb|EDM44533.1| putative flagellar motor protein MotB [unidentified eubacterium
SCB49]
Length = 286
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 51/136 (37%), Gaps = 7/136 (5%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DF 83
+++ + + ++ S + ++ D + F++ SY I +L L + + +
Sbjct: 136 SSEMMTDNDDIDISIDETVVMITISDKMLFNSGSYRINAKANPLLEKLAALINSEPALEV 195
Query: 84 LIEGHADELG-----SRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVYG 137
++EGH D + L + R+ AV + ++ P
Sbjct: 196 MVEGHTDSQTVKPGAIVKDNWDLSVERSTAVIRKLQDQYNVAPEKLIAAGRSSYHPVTEN 255
Query: 138 HDEDAYAKNRRAIVFL 153
+D +KNRR + +
Sbjct: 256 DTKDGRSKNRRTRIVI 271
>gi|126725798|ref|ZP_01741640.1| hypothetical protein RB2150_06318 [Rhodobacterales bacterium
HTCC2150]
gi|126705002|gb|EBA04093.1| hypothetical protein RB2150_06318 [Rhodobacterales bacterium
HTCC2150]
Length = 1017
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 43/120 (35%), Gaps = 14/120 (11%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLE--------KHDCDFLIEGHADELGS----- 94
V F + PA ++ + L+ D ++GH D +
Sbjct: 895 FSSEVLFPPGGAELSPAGEAEVAKVADILQDVIDKIPANIDWVIRVDGHTDNVAFNGLGK 954
Query: 95 RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+++ L RA +V + V+ R+ +G+ P +A A+NRR + L
Sbjct: 955 YSNNWELSQGRALSVVQFMVSSFGLPPDRLSANGFGEYQPINLADTPEARAQNRRIELKL 1014
>gi|186471185|ref|YP_001862503.1| OmpA/MotB domain-containing protein [Burkholderia phymatum STM815]
gi|184197494|gb|ACC75457.1| OmpA/MotB domain protein [Burkholderia phymatum STM815]
Length = 215
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 10/116 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGS----WLEKHDCDFLIEGHADELG------SR 95
+ +V F +S ++P +L +L + +L HD ++ G AD+
Sbjct: 85 IGISGNVLFALNSDQLQPQGRDLLKSLAAPLSAYLRSHDEILMVSGFADDQQVRAGNRRF 144
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ L +RA V F+ GI AS + ++G E P D + AKNRR +
Sbjct: 145 ADNWELSAQRALTVTRAFIDSGIPASSVFAAAFGSEQPVSSNADSEGRAKNRRVEI 200
>gi|88811406|ref|ZP_01126661.1| OmpA/MotB [Nitrococcus mobilis Nb-231]
gi|88791295|gb|EAR22407.1| OmpA/MotB [Nitrococcus mobilis Nb-231]
Length = 439
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 44/118 (37%), Gaps = 12/118 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIEGHADELGSRNS-- 97
+FF + S I L L + LE+ ++GH D
Sbjct: 319 FQSELFFPSGSAQIAAPGKDKLDRLATVLEEVSRRIPGDVDWVLQVDGHTDRRPIHTPRF 378
Query: 98 --SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA ++ +Y V RG+ +R+ YG+ P A A+NRR + L
Sbjct: 379 PSNWELSTARALSIVHYLVTRGVPPNRLAAAGYGQYDPIDSRDSPQALARNRRIELRL 436
>gi|114321319|ref|YP_743002.1| OmpA/MotB domain-containing protein [Alkalilimnicola ehrlichii
MLHE-1]
gi|114227713|gb|ABI57512.1| OmpA/MotB domain protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 276
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 48/122 (39%), Gaps = 10/122 (8%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLR 104
++ V FD S +R + + + L+K D +I GH D +G + L R
Sbjct: 153 TLSTDVLFDFDSAVLRAEGQDTIREVAAGLQKEFIDPLVVIVGHTDRIGDPGYNQRLSER 212
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE-------DAYAKNRRAIVFLKGCR 157
RA AV + + G S + G+ P V+ + + NRR V + R
Sbjct: 213 RADAVMDALLKNGFSRRDVVAQGRGEAEPVVFCEGDRATPALIACLSPNRRVEVQVL-ER 271
Query: 158 AN 159
N
Sbjct: 272 GN 273
>gi|330949998|gb|EGH50258.1| OmpA/MotB [Pseudomonas syringae Cit 7]
Length = 300
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++GH+D G+R ++ L RRA AV +YF A+GI ++ + +G+ P +E
Sbjct: 207 NRIELDGHSDNSGNRLTNRDLSRRRALAVMDYFKAQGIPEQQITLRFHGERYPLAPNTNE 266
Query: 141 DAYAKNRRAIVFLK 154
A+NRR V L+
Sbjct: 267 ANRARNRRVNVHLE 280
>gi|330722438|gb|EGH00277.1| Flagellar motor rotation protein MotB [gamma proteobacterium
IMCC2047]
Length = 130
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Query: 77 EKHDCDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKE 131
+ + +EGH D + S+ L RA +V + G+ +++R VT +
Sbjct: 9 KNVEGKISVEGHTDSVPIATSVFRSNWDLSSARALSVAHELFKGGVLNSNRFMVTGFADA 68
Query: 132 MPSVYGHDEDAYAKNRRAIVFL 153
P V + AKNRR + +
Sbjct: 69 KPLVANDNAANRAKNRRVEIII 90
>gi|312270719|gb|ADQ55760.1| OmpA [Haemophilus parasuis]
Length = 365
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 51/123 (41%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + G+ D +G +++ L
Sbjct: 239 AFSSDVLFDFGKANLKPASAQTLDAAHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 298
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 299 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQVQ 358
Query: 155 GCR 157
G +
Sbjct: 359 GSK 361
>gi|209968898|gb|ACJ02810.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 51/123 (41%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + G+ D +G +++ L
Sbjct: 239 AFSSDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 298
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 299 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQVQ 358
Query: 155 GCR 157
G +
Sbjct: 359 GSK 361
>gi|239994128|ref|ZP_04714652.1| OmpA/MotB [Alteromonas macleodii ATCC 27126]
Length = 398
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 61/141 (43%), Gaps = 5/141 (3%)
Query: 21 IDNLDTKISSPDTVLNES---SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
+D+ D +P V ++ ++ ++ + + V FD S ++ +S +++
Sbjct: 251 VDSKDMCPDTPAGVKVDAKGCTVFDEETVEITLRVLFDNESAVVKMPKDPEISEFAEFMK 310
Query: 78 KHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSV 135
++ +IEGH GS ++ L RRA GI SR++ YG+
Sbjct: 311 QYPSTTAVIEGHTSAPGSEAYNMDLSKRRAANFKEVMVDMYGIEGSRLETIGYGETQLLD 370
Query: 136 YGHDEDAYAKNRRAIVFLKGC 156
G + +A+ NRR V +K
Sbjct: 371 NGKNAEAHRVNRRISVTVKDT 391
>gi|224714303|gb|ACN62146.1| outer membrane protein A [Haemophilus parasuis]
gi|224714305|gb|ACN62147.1| outer membrane protein A [Haemophilus parasuis]
gi|224714307|gb|ACN62148.1| outer membrane protein A [Haemophilus parasuis]
Length = 365
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 51/123 (41%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + G+ D +G +++ L
Sbjct: 239 AFSSDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 298
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 299 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQVQ 358
Query: 155 GCR 157
G +
Sbjct: 359 GSK 361
>gi|332520148|ref|ZP_08396612.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
gi|332044707|gb|EGI80901.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
Length = 636
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 57/142 (40%), Gaps = 7/142 (4%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
++I+G D + + + + E+ V ++FD +I L NL
Sbjct: 491 LAIAGDDVEEVAVELALDPIEKIIEVEEV---VLRPIYFDYDKSNITAKAAFELDNLVQV 547
Query: 76 LEKHDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
+ K+ + H D S + AL RRA Y +++GI A+R+ G+ +
Sbjct: 548 MNKYPDMVIYATSHTDIRASNKYNDALSDRRAKTTVQYIISKGIDATRISGAGKGERELA 607
Query: 135 VY---GHDEDAYAKNRRAIVFL 153
V E+ + NRR+ +
Sbjct: 608 VDCGTNCTEEQHQLNRRSEFKI 629
>gi|209968912|gb|ACJ02817.1| outer membrane protein P5 [Haemophilus parasuis]
gi|224714271|gb|ACN62130.1| outer membrane protein A [Haemophilus parasuis]
Length = 365
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 51/123 (41%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + G+ D +G +++ L
Sbjct: 239 AFSSDVLFDFGKANLKPASAQTLDAAHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 298
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 299 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQVQ 358
Query: 155 GCR 157
G +
Sbjct: 359 GSK 361
>gi|77361038|ref|YP_340613.1| component of sodium-driven polar flagellar motor [Pseudoalteromonas
haloplanktis TAC125]
gi|76875949|emb|CAI87171.1| putative Component of sodium-driven polar flagellar motor
[Pseudoalteromonas haloplanktis TAC125]
Length = 292
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 44/102 (43%), Gaps = 2/102 (1%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNSSIALGLRRAYAVFN 111
+ ++S + + Q L + +L+ I + D G R +++ L RA A+ +
Sbjct: 188 YQSNSSKLTKSSQQRLDKIAEYLKNDPSIESINIASYTDSYGGRWNNLDLSKTRAKAIKD 247
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
Y ++ G+ +++ G++ KNRR ++ +
Sbjct: 248 YMISLGVDETKVHTDGLGEKRFVDTNDTILGRNKNRRLVIQI 289
>gi|325269973|ref|ZP_08136582.1| OmpA family protein [Prevotella multiformis DSM 16608]
gi|324987696|gb|EGC19670.1| OmpA family protein [Prevotella multiformis DSM 16608]
Length = 697
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/174 (21%), Positives = 59/174 (33%), Gaps = 33/174 (18%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG-----DSVFFDTSSYSIRPADIQ 67
+ + + SG N +I + + + + D++F+D ++RP +
Sbjct: 487 VLLATCSGHLNHKEEIRVSPVEASREYTLQFPLAGLHVPVLIDNIFYDFDKATLRPESEK 546
Query: 68 VLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT 126
L+ L E + + H D +GS + L RRA AV Y A GI+ R+
Sbjct: 547 ALNELVKLLDENPNVTIELSAHTDYIGSAEYNKRLSQRRADAVVAYLTAHGIARDRLTPV 606
Query: 127 SYGKEMP---------------------------SVYGHDEDAYAKNRRAIVFL 153
YGKE P E A NRR +
Sbjct: 607 GYGKERPKKIRKKLTEKYPWLKENDVLTEDFIRKLDKEKQETANQLNRRTEFTV 660
>gi|296329419|ref|ZP_06871912.1| outer membrane protein [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
gi|296153464|gb|EFG94289.1| outer membrane protein [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
Length = 153
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 65/142 (45%), Gaps = 8/142 (5%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKIS------SPDTVLNESSLQEQFSSSVGDSVFF 54
M + IF L A+ + +++ + I +LN + +E S+ F
Sbjct: 13 MLFLLIF-SLPALAVQALTTTQMRENSIRINALELKNVDILNSEAPKEMTIVLDERSLNF 71
Query: 55 DTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
D +++P +L+N+ ++E+++ + I GH D +GS + L RRA +V +
Sbjct: 72 DFDKSNVKPQYYDLLNNIKEFVEQNNYEITIVGHTDSIGSNAYNFKLSRRRAESVKAKLL 131
Query: 115 ARGISASRMK-VTSYGKEMPSV 135
G+S R+ + + G+E P
Sbjct: 132 EFGLSEDRIVGIEAMGEEQPIA 153
>gi|167770207|ref|ZP_02442260.1| hypothetical protein ANACOL_01550 [Anaerotruncus colihominis DSM
17241]
gi|167667529|gb|EDS11659.1| hypothetical protein ANACOL_01550 [Anaerotruncus colihominis DSM
17241]
Length = 321
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 46/142 (32%), Gaps = 8/142 (5%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI 85
+ + S + +++FF S +I +L LG L D + L+
Sbjct: 110 AASQGMEDSVQISKGDGRVYIRFQNNLFFAPDSAAILADAYPLLDFLGDCLNAVDDEILL 169
Query: 86 E-------GHADELGSRNSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYG 137
+ + S L RA + Y + + ++ YGK P
Sbjct: 170 VNINGHTAAVPNGETYQVSDWMLSSERASNIAIYLDDKKDVDPKKLRPMGYGKNFPVADN 229
Query: 138 HDEDAYAKNRRAIVFLKGCRAN 159
+NRR + + +++
Sbjct: 230 DTIAGREENRRVDIVIISNQSS 251
>gi|332519351|ref|ZP_08395818.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
gi|332045199|gb|EGI81392.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
Length = 636
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 57/142 (40%), Gaps = 7/142 (4%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
++I+G D + + + + E+ V ++FD +I L NL
Sbjct: 491 LAIAGDDVEEVAVELALDPIEKIIEVEEV---VLRPIYFDYDKSNITAKAAFELDNLVQV 547
Query: 76 LEKHDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
+ K+ + H D S + AL RRA Y +++GI A+R+ G+ +
Sbjct: 548 MNKYPDMVIYATSHTDIRASNKYNDALSDRRAKTTVQYIISKGIDATRISGAGKGERELA 607
Query: 135 VY---GHDEDAYAKNRRAIVFL 153
V E+ + NRR+ +
Sbjct: 608 VDCGTNCTEEQHQLNRRSEFKI 629
>gi|288926326|ref|ZP_06420250.1| OmpA family protein [Prevotella buccae D17]
gi|288336931|gb|EFC75293.1| OmpA family protein [Prevotella buccae D17]
Length = 684
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 46/137 (33%), Gaps = 28/137 (20%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGL 103
+ + D++F++ ++ P + L L E + + H D GS + L
Sbjct: 511 APVLIDNIFYEFDKANLTPESTKALDELVKLLNENPNVTIELSAHCDYKGSMEYNKRLSQ 570
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMP---------------------------SVY 136
RRA AV Y V GI+ R+ YGKE P
Sbjct: 571 RRAEAVVAYLVGHGIARDRLTPAGYGKERPKTIRRKVAAKYPWLKEGDVLTEDFIHHLDA 630
Query: 137 GHDEDAYAKNRRAIVFL 153
G E NRR +
Sbjct: 631 GKQEICNQLNRRTEFTV 647
>gi|149913687|ref|ZP_01902220.1| hypothetical protein RAZWK3B_10301 [Roseobacter sp. AzwK-3b]
gi|149812807|gb|EDM72636.1| hypothetical protein RAZWK3B_10301 [Roseobacter sp. AzwK-3b]
Length = 599
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 44/136 (32%), Gaps = 14/136 (10%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIE 86
E E V F + A + ++ + + ++
Sbjct: 464 AQEGIRIEGDRFVFSSEVLFAPGEAELSGAGQREVAKVAEIFRSVTDEIPEGIDWVLQVD 523
Query: 87 GHADELG-----SRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDE 140
GH D++ + + L + RA +V Y G+ R+ +G+ P
Sbjct: 524 GHTDDVPVRPGAAFEDNWELSMARALSVVRYMIDTLGLPPERLSANGFGQYQPVNPDDTP 583
Query: 141 DAYAKNRRAIVFLKGC 156
+A A+NRR + G
Sbjct: 584 EARAQNRRIELKFTGK 599
>gi|78065624|ref|YP_368393.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383]
gi|77966369|gb|ABB07749.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
Length = 222
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 62/151 (41%), Gaps = 8/151 (5%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
+ + D + V + + FD +++P Q L L S
Sbjct: 62 ATANAKCDGALVAQAPQPPVAPVAPAITSQKITYQADALFDFDKATLKPLGKQKLDELAS 121
Query: 75 WLEKHDCDFLI-EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
+E + + ++ G+ D +GS + L LRRA AV +Y V++G+ A+++ GK P
Sbjct: 122 KIEGMNTEVVVATGYTDRIGSDKYNDRLSLRRAQAVKSYLVSKGVPANKIYTEGKGKRNP 181
Query: 134 SVYGHDEDAY-------AKNRRAIVFLKGCR 157
G ++ A +RR V + G +
Sbjct: 182 VTTGCNQKNRKQLIACLAPDRRVEVEVVGTQ 212
>gi|107022117|ref|YP_620444.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
gi|116689062|ref|YP_834685.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
HI2424]
gi|170732350|ref|YP_001764297.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
MC0-3]
gi|206561293|ref|YP_002232058.1| putative ompA family protein [Burkholderia cenocepacia J2315]
gi|254245998|ref|ZP_04939319.1| Outer membrane protein, OmpA/MotB family [Burkholderia cenocepacia
PC184]
gi|105892306|gb|ABF75471.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
gi|116647151|gb|ABK07792.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424]
gi|124870774|gb|EAY62490.1| Outer membrane protein, OmpA/MotB family [Burkholderia cenocepacia
PC184]
gi|169815592|gb|ACA90175.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3]
gi|198037335|emb|CAR53262.1| putative ompA family protein [Burkholderia cenocepacia J2315]
Length = 222
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 62/151 (41%), Gaps = 8/151 (5%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
+ + D + V + + FD +++P Q L L S
Sbjct: 62 ATANAKCDGALVAQAPQPPVAPVAPAITSQKITYQADALFDFDKATLKPLGKQKLDELAS 121
Query: 75 WLEKHDCDFLI-EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
+E + + ++ G+ D +GS + L LRRA AV +Y V++G+ A+++ GK P
Sbjct: 122 KIEGMNTEVVVATGYTDRIGSDKYNDRLSLRRAQAVKSYLVSKGVPANKIYTEGKGKRNP 181
Query: 134 SVYGHDEDAY-------AKNRRAIVFLKGCR 157
G ++ A +RR V + G +
Sbjct: 182 VTTGCNQKNRKQLIACLAPDRRVEVEVVGTQ 212
>gi|262394173|ref|YP_003286027.1| outer membrane protein [Vibrio sp. Ex25]
gi|262337767|gb|ACY51562.1| outer membrane protein [Vibrio sp. Ex25]
Length = 204
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 67/189 (35%), Gaps = 31/189 (16%)
Query: 1 MQYSTIFIILSAITMMSI-------------SGIDNLDTKISSPDTVLNE----SSLQEQ 43
M+ I +LS + + S D + D V+N E
Sbjct: 1 MKPMKILFVLSLLAVTQQVAAEDEYDYRPVPSAEQIADLQDEDNDGVINARDMCPGTPEG 60
Query: 44 FSS-------------SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHA 89
++ + F S I P + + L +L+++ + G+A
Sbjct: 61 SEVDNDGCGEYIKASDNMQVRILFANDSDEINPVFRRQVRELSDFLKEYPTTSIELHGYA 120
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
++G + L RRA V ++ I SR+++ +G + G DE ++A NRR
Sbjct: 121 SKVGGSQHNQDLSERRARNVREALLSYNIEPSRVRIVGFGDTHLAQQGTDEVSHALNRRV 180
Query: 150 IVFLKGCRA 158
+ G +
Sbjct: 181 TASVVGYKG 189
>gi|308048254|ref|YP_003911820.1| hypothetical protein Fbal_0532 [Ferrimonas balearica DSM 9799]
gi|307630444|gb|ADN74746.1| conserved hypothetical protein [Ferrimonas balearica DSM 9799]
Length = 3058
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK-HD 80
D + +L + + + F S +I VL NL L D
Sbjct: 2915 DACPDTPMTHAVDGRGCTLWRTEAMELELVLLFANDSATIPATYDVVLQNLSEQLAPLAD 2974
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+IEGHA S +++L RRA AV RG+ ++ + + G+EMP+V G+ E
Sbjct: 2975 YQVVIEGHASAPASSRYNLSLSERRAQAVGEALNQRGVESANITYVARGEEMPAVAGNTE 3034
Query: 141 DAYAKNRRAIVFLK 154
AY +NRRA+V +
Sbjct: 3035 HAYGQNRRAVVMVS 3048
>gi|294142621|ref|YP_003558599.1| OmpA family protein [Shewanella violacea DSS12]
gi|293329090|dbj|BAJ03821.1| OmpA family protein [Shewanella violacea DSS12]
Length = 200
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/181 (18%), Positives = 60/181 (33%), Gaps = 27/181 (14%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISSP----------DTVLNESSLQEQFSSSVGD-- 50
T +L+ + + S I +D + V E +S+ +
Sbjct: 1 MKTFITLLAITLLSACSSIVTMDGNTTQVHDLNDMDKDGVIVARERCNDTLLGASIDNYG 60
Query: 51 -------------SVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRN 96
+ F SY I P + + ++ + IEGH + GS
Sbjct: 61 CGKVKPIHDRSELKILFPNDSYYIDPMYYDQVEVIAVFMNDFPNTNVTIEGHCSKTGSYE 120
Query: 97 SSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
++AL RA AV + + R+ Y + P + A+ +NRR I + G
Sbjct: 121 HNLALSQNRANAVTSLLAEHYSIASDRLTAIGYSYDRPVDESDTDMAHTRNRRVIAEVTG 180
Query: 156 C 156
Sbjct: 181 E 181
>gi|28869933|ref|NP_792552.1| OmpA family protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|28853178|gb|AAO56247.1| OmpA family protein [Pseudomonas syringae pv. tomato str. DC3000]
Length = 451
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 48/147 (32%), Gaps = 5/147 (3%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS 70
+ + K+ + + + + + + F S + Q L
Sbjct: 307 AIVAQSGFVSQTVQALKVPPTAQMPADYQALARKAERLSVNFRFAQGSARLDNKAQQDLK 366
Query: 71 NLGSWLEKH---DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
+ +L+ + + G D + L RA AV + G++ +
Sbjct: 367 RVAEYLKASGKLNQQVTLVGFGDAKSDPARAALLSRLRAMAVRRELIKSGVTFRDIL--G 424
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G EMP +D KNRR V+++
Sbjct: 425 LGDEMPVATNDIDDGRIKNRRVEVWVQ 451
>gi|330960958|gb|EGH61218.1| OmpA family protein [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 447
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/149 (18%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
+ A + L + ++ ++ ++ SV F S + Q
Sbjct: 303 AIVAQEGFVAQTVQALKVQPTAQMPADYQALTRKAERLSVNFR--FAQGSARLDNKAQQD 360
Query: 69 LSNLGSWLEKHDC---DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
L + +L+ +D + G D + L RA AV + G++ +
Sbjct: 361 LKRVVDYLKANDRLDQHVTLVGFGDAKSDPARAALLSRLRAMAVRRELLKSGVTFRDIL- 419
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G EMP +D KNRR V+++
Sbjct: 420 -GLGDEMPVATNDIDDGRIKNRRVEVWVQ 447
>gi|330937557|gb|EGH41498.1| OmpA/MotB [Pseudomonas syringae pv. pisi str. 1704B]
Length = 221
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 41/74 (55%)
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++GH+D G+R ++ L RRA AV +YF A+GI ++ + +G+ P +E
Sbjct: 128 NRIELDGHSDNSGNRLTNRDLSRRRALAVMDYFKAQGIPEQQITLRFHGERYPLAPNTNE 187
Query: 141 DAYAKNRRAIVFLK 154
A+NRR V L+
Sbjct: 188 ANRARNRRVNVHLE 201
>gi|308050648|ref|YP_003914214.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
gi|307632838|gb|ADN77140.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
Length = 166
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/134 (26%), Positives = 57/134 (42%), Gaps = 5/134 (3%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
D D +P V+ + +S V ++FDT S +RP L+ +
Sbjct: 27 DAKDACPDTPHWVVEANGCPPGKASPV--VLYFDTDSARLRPEHHDQLAVFVG--DGVAG 82
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDE 140
+ GHAD GS + LG RRA AV R + AS+++ S G+ +P E
Sbjct: 83 RVRVVGHADSRGSLAHNQDLGGRRALAVSKALSERYGVDASQIQRQSLGETLPWRDNLTE 142
Query: 141 DAYAKNRRAIVFLK 154
NRR ++++
Sbjct: 143 TGQTLNRRVELWIE 156
>gi|258545330|ref|ZP_05705564.1| OmpA family protein [Cardiobacterium hominis ATCC 15826]
gi|258519433|gb|EEV88292.1| OmpA family protein [Cardiobacterium hominis ATCC 15826]
Length = 244
Score = 59.8 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 55/127 (43%), Gaps = 6/127 (4%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEG 87
+ V + + ++ V FD I+P Q L ++ L+++ + + G
Sbjct: 108 VANSGVQVQRVNESTIQLNIQSEVLFDVDKAVIKPNFYQPLGSIAQTLQQYPETVVHVYG 167
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
D GS ++ L RRA +V Y +GI++ R V YG++ + ++R
Sbjct: 168 FTDGSGSPQHNLQLSQRRAQSVAQYLAQQGINSQRFVVQGYGEQY-----ASAENNPQDR 222
Query: 148 RAIVFLK 154
R +++K
Sbjct: 223 RVAIYIK 229
>gi|319942535|ref|ZP_08016845.1| outer membrane protein A [Sutterella wadsworthensis 3_1_45B]
gi|319803938|gb|EFW00856.1| outer membrane protein A [Sutterella wadsworthensis 3_1_45B]
Length = 222
Score = 59.4 bits (142), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/156 (21%), Positives = 59/156 (37%), Gaps = 15/156 (9%)
Query: 17 SISGIDN-LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
+ D + K + + + F+ +++ VL +L S
Sbjct: 64 AGCACDADILDKKACTAVEAPAPQQKSAEKVTFSADTLFNFDKATLKDEGRAVLDDLVSR 123
Query: 76 LEKHDCDFLIEG-HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
+ D + ++ +AD +GS ++ L RRA AV Y V +G+ A+ +K G+ P
Sbjct: 124 VAGVDLEVILTTGYADRIGSDAYNLKLSQRRADAVKAYLVQKGVDAALIKSEGKGEADPV 183
Query: 135 VYGHDE-------------DAYAKNRRAIVFLKGCR 157
V + NRRA+V + G R
Sbjct: 184 VNCPNPSKAGQVKTFKELVQCLQPNRRAVVEVVGTR 219
>gi|66047120|ref|YP_236961.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
gi|63257827|gb|AAY38923.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
Length = 300
Score = 59.4 bits (142), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 41/74 (55%)
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++GH+D G+R ++ L RRA AV +YF A+G+ ++ + +G+ P +E
Sbjct: 207 NRIELDGHSDNSGNRLTNRDLSRRRALAVMDYFKAQGVPEQQITLRFHGERYPLAPNTNE 266
Query: 141 DAYAKNRRAIVFLK 154
A+NRR V L+
Sbjct: 267 ANRARNRRVNVHLE 280
>gi|325286251|ref|YP_004262041.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
gi|324321705|gb|ADY29170.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
Length = 701
Score = 59.4 bits (142), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/145 (19%), Positives = 55/145 (37%), Gaps = 11/145 (7%)
Query: 20 GIDNLDTKISSPDTVLNE----SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS- 74
+ ++ + D + + +++ + +FFD IR L L
Sbjct: 554 NTATKENQVVNVDIAMRKLHDMIAIENGIKKLKTEKIFFDFDKSYIRQDASVELDKLVDV 613
Query: 75 WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMP 133
E + IE H D G+ + L +RA + Y +++GI +R+ YG+E
Sbjct: 614 MTEYPNMKIKIESHTDVRGNNAYNKYLSDKRAKSTRKYIISKGIDENRIISAIGYGEEQL 673
Query: 134 SVYGHD-----EDAYAKNRRAIVFL 153
D + + +NRR+ +
Sbjct: 674 INGCEDGVNCSREKHQENRRSEFII 698
>gi|224714291|gb|ACN62140.1| outer membrane protein A [Haemophilus parasuis]
Length = 365
Score = 59.4 bits (142), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 51/123 (41%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + G+ D +G +++ L
Sbjct: 239 AFSSDVLFDFGKANLKPASAQTLDAAHAEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 298
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 299 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQVQ 358
Query: 155 GCR 157
G +
Sbjct: 359 GSK 361
>gi|171059315|ref|YP_001791664.1| OmpA/MotB domain-containing protein [Leptothrix cholodnii SP-6]
gi|170776760|gb|ACB34899.1| OmpA/MotB domain protein [Leptothrix cholodnii SP-6]
Length = 271
Score = 59.4 bits (142), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 53/141 (37%), Gaps = 4/141 (2%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+ +++ + PD E + + ++ F S + A + V+ +
Sbjct: 128 LLANLAPPGAGKSSARGPDLAACEKA---FGAVQAARAIRFKPGSAQLEQAAMPVVHQIA 184
Query: 74 SWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
+ ++ +IEGHAD G + L RRA AV + G+ +++ G
Sbjct: 185 ALAQRCSRWRVIIEGHADTSGDPVQNERLSRRRAAAVAAAMILEGVPLDQIESVGRGASR 244
Query: 133 PSVYGHDEDAYAKNRRAIVFL 153
P D A KNRR L
Sbjct: 245 PIAASSDAQASVKNRRIEFHL 265
>gi|71906332|ref|YP_283919.1| OmpA/MotB [Dechloromonas aromatica RCB]
gi|71845953|gb|AAZ45449.1| OmpA/MotB [Dechloromonas aromatica RCB]
Length = 184
Score = 59.4 bits (142), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 58/146 (39%), Gaps = 1/146 (0%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL 72
+ + +G + + ++ +E + ++VFF S ++ + Q L +
Sbjct: 39 LASVVQNGHQAPLPRSTGARIEMHRDETEEAPVIAEENAVFFTLGSAALSHSGTQKLEII 98
Query: 73 GSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
+ L+ G+A++ GS + ++A+ R V + RG+ +++V + G E
Sbjct: 99 AERLIADRTLHVLLVGYANDNGSSSFNLAVSDNRLATVAAFLRKRGVHGEQIRVQALGSE 158
Query: 132 MPSVYGHDEDAYAKNRRAIVFLKGCR 157
K RR + ++ +
Sbjct: 159 KNLSNCRSSKCRQKFRRVDLVIRNKK 184
>gi|163747526|ref|ZP_02154876.1| OmpA family protein [Oceanibulbus indolifex HEL-45]
gi|161379204|gb|EDQ03623.1| OmpA family protein [Oceanibulbus indolifex HEL-45]
Length = 191
Score = 59.4 bits (142), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 4/100 (4%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FF T Y+I L+N + ++I GH D S ++ L RA +V +
Sbjct: 93 FFATDKYNISAQGRARLAN--FFQSTGAVSYIITGHTDSRASDAYNMRLSYNRANSVAHV 150
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
A + A V YG+ MP+V + AKNRR +
Sbjct: 151 --ANQVGARIADVRGYGERMPAVPNNSAANMAKNRRVEII 188
>gi|302343736|ref|YP_003808265.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075]
gi|301640349|gb|ADK85671.1| OmpA/MotB domain protein [Desulfarculus baarsii DSM 2075]
Length = 260
Score = 59.4 bits (142), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 44/117 (37%), Gaps = 4/117 (3%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR---- 95
Q + + + F S + P + L + + ++ + GH D+ R
Sbjct: 107 SQGMRTVVINADMLFAPGSAKLSPNILPFLDEVAAVIKDRAYPLSVYGHTDDEPWRGKGG 166
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ L +RA +V + V+RG+SASR+ P + +N R +
Sbjct: 167 QDNWTLSAQRALSVVAHLVSRGVSASRLAAFGLAGTQPIASNTTAEGRRQNNRVALV 223
>gi|124516387|gb|EAY57895.1| putative outer membrane protein, OmpA/MotB family [Leptospirillum
rubarum]
Length = 179
Score = 59.4 bits (142), Expect = 1e-07, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 63/163 (38%), Gaps = 16/163 (9%)
Query: 1 MQYSTIF---IILSAITMMSISGIDNLDTKISSPDTV--------LNESSLQEQFSSSVG 49
M S +F ++ + +G S N SS Q SS+
Sbjct: 8 MGLSILFAGILVTGGCASTNGAGAGTQSNTTESTPAPAPAPAPEASNASSTQSDIESSLS 67
Query: 50 DSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
+ + + D ++L + +I GHADE G+ +I LG +RA A
Sbjct: 68 RDITYGFDKSVLTSEDRRILKKDAAILNANPTVHVVIAGHADERGTDTYNIVLGQKRAKA 127
Query: 109 VFNYFVARGISASRMKVTSYGKE----MPSVYGHDEDAYAKNR 147
Y V GI +R+K+ SYGK H+E ++KNR
Sbjct: 128 AMMYLVNLGIKKNRIKIVSYGKRTIPGYDLCSDHNEQCWSKNR 170
>gi|315181670|gb|ADT88583.1| outer membrane protein, hypothetical [Vibrio furnissii NCTC 11218]
Length = 208
Score = 59.4 bits (142), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD- 80
D ++ + S + F +S +I P + + + +L+
Sbjct: 57 DKCPDTPAASQIDNEGCGTAIKSSHLQKLHILFANNSSTIPPVFMNQIRQMADFLKLFPE 116
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++G+A ++G + ++AL +R+ AV + G++ R+++ YG + +V G D+
Sbjct: 117 ASIELQGYASKVGKADHNLALSKQRSEAVRLQLLRFGVTPKRIRIVGYGDTVLAVNGEDQ 176
Query: 141 DAYAKNRRAIVFLKGCRA 158
++A+NRR + G +
Sbjct: 177 VSHAQNRRVTASVVGFKG 194
>gi|88800584|ref|ZP_01116145.1| chemotaxis MotB protein, putative [Reinekea sp. MED297]
gi|88776639|gb|EAR07853.1| chemotaxis MotB protein, putative [Reinekea sp. MED297]
Length = 355
Score = 59.4 bits (142), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 52/150 (34%), Gaps = 8/150 (5%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+ + ++++ L + + +S+ F + I Q L+NL + L
Sbjct: 198 AQLQTQLSQLNQEKEKLVTQLEDGTTAIKLPESILFASGRADINAEGRQSLANLATALSS 257
Query: 79 HDCD-FLIEGHADELGS-------RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
I+GH D ++ L RA + + +GI A +M+ Y
Sbjct: 258 FPNHLISIQGHTDSQTIAPATAEKYPTNWELSAARAASAVRELLKQGIPADQMQAVGYAD 317
Query: 131 EMPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
P V +NRR V L + T
Sbjct: 318 TRPLVEETSAQTRQQNRRIEVILLPNQFTT 347
>gi|326794029|ref|YP_004311849.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
gi|326544793|gb|ADZ90013.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
Length = 272
Score = 59.4 bits (142), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 1/108 (0%)
Query: 54 FDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F ++S ++ A +L L W + + GH D GS + L L RA + Y
Sbjct: 146 FASASAAMPDAMPPLLDELAKWLILNPHYKVTLVGHTDSQGSIEENEHLALDRAATISRY 205
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
+A + A +++ G P + E + NRR V + +T
Sbjct: 206 LIAHNVDAHQLRCNGEGPWNPISHNASEQSRKYNRRVEVDVSRIEEDT 253
>gi|322433237|ref|YP_004210458.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
gi|321165629|gb|ADW71331.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
Length = 438
Score = 59.4 bits (142), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 8/149 (5%)
Query: 9 ILSAITMMSISGI----DNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSI 61
+LS+ T + + +++ + + ++V FD S I
Sbjct: 284 LLSSPTTFAECEVPFHVSARPVAVANGAGSSLTPAEIAKSDVIFHENVQDALFDYDSAEI 343
Query: 62 RPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA 120
RP + + G + E D LIEG+AD+ GS ++ LG +RA A + +GI
Sbjct: 344 RPDAKVAIEHAGKFLTEHPDIQVLIEGYADDRGSAEYNLGLGAQRASAARTALMEQGIPP 403
Query: 121 SRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
R+K+ SYGKE E + +NRRA
Sbjct: 404 ERLKIISYGKEAQVCVQQTEQCWQQNRRA 432
>gi|254463477|ref|ZP_05076893.1| OmpA family protein [Rhodobacterales bacterium HTCC2083]
gi|206680066|gb|EDZ44553.1| OmpA family protein [Rhodobacteraceae bacterium HTCC2083]
Length = 211
Score = 59.4 bits (142), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 41/100 (41%), Gaps = 4/100 (4%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FF T+S+ I + Q L N + +I GH D S ++ L RA V N
Sbjct: 113 FFSTNSHHISRSGQQHLMNFFRSSKASAY--IIAGHTDSRASDEYNMRLSYNRATTVANI 170
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
AR A V YG+ MP + +KNRR +
Sbjct: 171 --ARSAGARVADVRGYGERMPVASNKSQVGMSKNRRVEII 208
>gi|220924409|ref|YP_002499711.1| OmpA/MotB domain-containing protein [Methylobacterium nodulans ORS
2060]
gi|219949016|gb|ACL59408.1| OmpA/MotB domain protein [Methylobacterium nodulans ORS 2060]
Length = 337
Score = 59.4 bits (142), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 12/118 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIEGHADELGS----R 95
+ V F S+R L + + + + + ++GH D
Sbjct: 217 LQSEVLFAAGQASLRAEAGPELDRIATAIRELNRQIPSDIPWVLRVDGHTDARPISSSAF 276
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ AL RA AV Y V RGI + ++G+ P G ++AYA+NRR + L
Sbjct: 277 PSNWALSAARAIAVVQYLVGRGIPPQHLLAGAFGEFQPIDTGTSDEAYARNRRIELKL 334
>gi|332663816|ref|YP_004446604.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332332630|gb|AEE49731.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 406
Score = 59.4 bits (142), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 50/133 (37%), Gaps = 4/133 (3%)
Query: 22 DNLDTKISSPD-TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
I +PD + L +S L + + F + R + + L
Sbjct: 274 STPPKSIDNPDFSTLKKSDLTMGQTLRIPSITFAVNDTILSRASYPNLDKLLTFMNTNPA 333
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ GH + L + + L LRRA AV +Y V +G+ R +V YGK P
Sbjct: 334 IVLEVGGHTNGLCADDYCNRLSLRRARAVVDYLVKKGVKPERFQVKGYGKTQPI---STV 390
Query: 141 DAYAKNRRAIVFL 153
KN+R + +
Sbjct: 391 KNDPKNQRVEIKI 403
>gi|89070721|ref|ZP_01157983.1| flagellar motor protein [Oceanicola granulosus HTCC2516]
gi|89043679|gb|EAR49884.1| flagellar motor protein [Oceanicola granulosus HTCC2516]
Length = 1022
Score = 59.4 bits (142), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 43/120 (35%), Gaps = 14/120 (11%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGS--------WLEKHDCDFLIEGHADELG-----S 94
V F S ++ A ++++ + D ++GH D+L
Sbjct: 900 FSSEVLFAPGSATLSNAGRAQIASVADLLRDIADDIPDGIDWVIRVDGHTDDLPLSGTGE 959
Query: 95 RNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA +V Y G R+ +G+ P + E+A A NRR + L
Sbjct: 960 YADNWELSQARALSVVRYMEDFLGFPPDRLAANGFGEHQPLIDEDTEEARAANRRIELKL 1019
>gi|332521031|ref|ZP_08397491.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
gi|332043561|gb|EGI79757.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
Length = 638
Score = 59.4 bits (142), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 52/131 (39%), Gaps = 8/131 (6%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGH 88
+P+ E + F + ++FD IRP L + ++ E ++ H
Sbjct: 506 TPEKRAAEVGT-DLFVLLDLNPIYFDFDKSYIRPDAQVELQKVINYLNEYPSVSIDVQSH 564
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHD-----EDA 142
D G + +L RR + N+ + +G + R+ YG+ + E+
Sbjct: 565 TDSRGRDAYNKSLSQRRNTSTKNWIIEKGKISKSRISGRGYGETQLVNRCSNGVKCSEEE 624
Query: 143 YAKNRRAIVFL 153
+ +NRR++ +
Sbjct: 625 HQQNRRSMFIV 635
>gi|312270721|gb|ADQ55761.1| OmpA [Haemophilus parasuis]
gi|312270723|gb|ADQ55762.1| OmpA [Haemophilus parasuis]
Length = 366
Score = 59.4 bits (142), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 51/123 (41%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + G+ D +G +++ L
Sbjct: 240 AFSSDVLFDFGKANLKPAAAQTLDAAHAEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 299
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 300 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQVQ 359
Query: 155 GCR 157
G +
Sbjct: 360 GSK 362
>gi|317153382|ref|YP_004121430.1| OmpA/MotB domain-containing protein [Desulfovibrio aespoeensis
Aspo-2]
gi|316943633|gb|ADU62684.1| OmpA/MotB domain protein [Desulfovibrio aespoeensis Aspo-2]
Length = 254
Score = 59.4 bits (142), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 45/130 (34%), Gaps = 5/130 (3%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEG 87
++ SS + +S F S + P L + + +E + + +I G
Sbjct: 116 ARDLTSMARVSSDKSGVMLRFNNSAMFQRGSAELSPQAKPALEVVIAGMENKNFNLVING 175
Query: 88 HADELGS----RNSSIALGLRRAYAVFNY-FVARGISASRMKVTSYGKEMPSVYGHDEDA 142
H D S+ L RA Y ISA+RMK Y P V E+
Sbjct: 176 HTDSETPESDLYTSNWELSAARAATCLRYILTHSDISANRMKAVGYAGAKPIVPSTSEEN 235
Query: 143 YAKNRRAIVF 152
NRR F
Sbjct: 236 RQINRRVEFF 245
>gi|46201524|ref|ZP_00054848.2| COG2885: Outer membrane protein and related
peptidoglycan-associated (lipo)proteins
[Magnetospirillum magnetotacticum MS-1]
Length = 114
Score = 59.4 bits (142), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FD+ + +L + L+++ ++ GHAD+ GSR ++ALG RRA AV Y
Sbjct: 11 FDSDRLDLNAKAKAILDGVAEELKRNSTLTAILAGHADDRGSREYNLALGERRAEAVKTY 70
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G RM SYGKE P + A A NRR +V L+
Sbjct: 71 LAVHGAPVERMAAISYGKEQPRDTSGTKAARAANRRVVVRLE 112
>gi|312270715|gb|ADQ55758.1| OmpA [Haemophilus parasuis]
Length = 365
Score = 59.4 bits (142), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 51/123 (41%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + G+ D +G +++ L
Sbjct: 239 AFSSDVLFDFGKANLKPASAQTLDAAHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 298
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 299 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQVQ 358
Query: 155 GCR 157
G +
Sbjct: 359 GSK 361
>gi|146301688|ref|YP_001196279.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
UW101]
gi|146156106|gb|ABQ06960.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
Length = 653
Score = 59.4 bits (142), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 52 VFFDTSSYSIRPADIQVL-SNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
++FD ++I A L L E I H D S S++ L +RA ++
Sbjct: 543 IYFDLGKWNITDAAAVELGKILAVMQEYPKMRIDIRSHTDSRSSAKSNLVLSDKRAKSIM 602
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHD-----EDAYAKNRRAIVFL 153
+ V++GI A R++ YG+ D E+ + KNRR+ +
Sbjct: 603 AWLVSKGIDAKRLRGKGYGESQLLNRCKDGVKCSEEEHLKNRRSEFMI 650
>gi|315180476|gb|ADT87390.1| hypothetical protein vfu_A02253 [Vibrio furnissii NCTC 11218]
Length = 271
Score = 59.4 bits (142), Expect = 1e-07, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 31/78 (39%)
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+ I GH+D G ++++ RRA V + + G+ M++ G P
Sbjct: 191 FDPKIKTVRITGHSDSHGDTVVNLSVSRRRADDVAYWMMMAGVPTEMMEIRGQGGRYPVG 250
Query: 136 YGHDEDAYAKNRRAIVFL 153
E+ NRR + L
Sbjct: 251 NNATEEGRLANRRVEIEL 268
>gi|209168782|gb|ACI42382.1| major outer membrane protein [Aeromonas hydrophila]
Length = 344
Score = 59.4 bits (142), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 58/146 (39%), Gaps = 16/146 (10%)
Query: 28 ISSPDTVLNESSLQEQFSS----SVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHD 80
+P V+ E+ ++ V F S++P + L+ L + D
Sbjct: 195 APAPAPVVEEAPAPAPQVVEKNFALNSDVLFAFGKDSLKPEGVAALNGLYQQIVEFQPKD 254
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS------ 134
+ ++ G+ D +GS + L RA V N+ V++G++AS++ V G+ P
Sbjct: 255 GNAVVVGYTDRIGSDAYNQKLSEARARTVANFLVSKGMAASKVAVEGRGEANPVTGTKCN 314
Query: 135 ---VYGHDEDAYAKNRRAIVFLKGCR 157
A +RR V + G +
Sbjct: 315 GVKAKTQLISCLAPDRRVEVRVSGVQ 340
>gi|330973095|gb|EGH73161.1| OmpA/MotB [Pseudomonas syringae pv. aceris str. M302273PT]
Length = 300
Score = 59.4 bits (142), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 41/74 (55%)
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++GH+D G+R ++ L RRA AV +YF A+G+ ++ + +G+ P +E
Sbjct: 207 NRIELDGHSDNSGNRLTNRDLSRRRALAVMDYFKAQGVPEQQITLRFHGERYPLAPNTNE 266
Query: 141 DAYAKNRRAIVFLK 154
A+NRR V L+
Sbjct: 267 ANRARNRRVNVHLE 280
>gi|330875090|gb|EGH09239.1| OmpA family protein [Pseudomonas syringae pv. morsprunorum str.
M302280PT]
Length = 447
Score = 59.4 bits (142), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 48/147 (32%), Gaps = 5/147 (3%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS 70
+ + K+ + + + + + + F S + Q L
Sbjct: 303 AIVAQSGFVSQTVQALKVPPTAQMPADYQALARKAERLSVNFRFAQGSARLDNKAQQDLK 362
Query: 71 NLGSWLEKH---DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
+ +L+ + + G D + L RA AV + G++ +
Sbjct: 363 RVAEYLKASGKLNQQVTLVGFGDAKSDPARAALLSRLRAMAVRRELIKSGVTFRDIL--G 420
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G EMP +D KNRR V+++
Sbjct: 421 LGDEMPVATNDIDDGRIKNRRVEVWVQ 447
>gi|225873020|ref|YP_002754479.1| ompA family protein [Acidobacterium capsulatum ATCC 51196]
gi|225791412|gb|ACO31502.1| ompA family protein [Acidobacterium capsulatum ATCC 51196]
Length = 446
Score = 59.4 bits (142), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 57/122 (46%), Gaps = 2/122 (1%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHA 89
+ + F ++ D+ FFD + Y++RP +++ S+LE H I G A
Sbjct: 316 VEKPATNNPAMLDFEKNIQDA-FFDYNQYNLRPDAQSAIAHDASYLESHPDIHITIAGFA 374
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
DE G+ +I LGL+RA AV GI RM V SYGKE + +NRRA
Sbjct: 375 DERGTAEYNIWLGLQRALAVRRALAKDGIDMGRMNVLSYGKEKQFCSDQTPACFQQNRRA 434
Query: 150 IV 151
Sbjct: 435 HF 436
>gi|315266048|gb|ADT92901.1| OmpA/MotB domain protein [Shewanella baltica OS678]
Length = 365
Score = 59.4 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 52/130 (40%), Gaps = 3/130 (2%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF 83
T I+S + +++ E + V F+ S + D + + ++
Sbjct: 227 TSTVINSVTNTVIKATPIELEEVTFP--VLFNFDSSELFFVDSLQII-INRLIQFPQATV 283
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
++ G++D GS ++AL RR ++ Y G+ ++ YG++ P E
Sbjct: 284 ILRGYSDSQGSSEYNLALSKRRTDSITQYLTEHGVKPQQIIAEHYGEQYPVTDKISEQHK 343
Query: 144 AKNRRAIVFL 153
NRR V L
Sbjct: 344 HLNRRVQVLL 353
>gi|160873823|ref|YP_001553139.1| OmpA/MotB domain-containing protein [Shewanella baltica OS195]
gi|160859345|gb|ABX47879.1| OmpA/MotB domain protein [Shewanella baltica OS195]
Length = 369
Score = 59.4 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 52/130 (40%), Gaps = 3/130 (2%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF 83
T I+S + +++ E + V F+ S + D + + ++
Sbjct: 231 TSTVINSVTNTVIKATPIELEEVTFP--VLFNFDSSELFFVDSLQII-INRLIQFPQATV 287
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
++ G++D GS ++AL RR ++ Y G+ ++ YG++ P E
Sbjct: 288 ILRGYSDSQGSSEYNLALSKRRTDSITQYLTEHGVKPQQIIAEHYGEQYPVTDKISEQHK 347
Query: 144 AKNRRAIVFL 153
NRR V L
Sbjct: 348 HLNRRVQVLL 357
>gi|330447990|ref|ZP_08311638.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328492181|dbj|GAA06135.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 196
Score = 59.4 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 64/142 (45%), Gaps = 4/142 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDS---VFFDTSSYSIRPADIQVLSNL-GSWLE 77
+ D +P + ++ F + ++ V F S I + ++ ++N+ +
Sbjct: 42 NQRDRCADTPIDAVVDNDGCPTFVKNSEENNIHVLFANDSSEIPESYMENIANMSAFLAK 101
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
D ++G+A +GS ++AL RRA A+ + G+S +R+K +G P
Sbjct: 102 YPDTHIELKGYASPVGSAAYNVALSKRRAQAIRQALITEGVSPARIKTVGFGDSDPVKAD 161
Query: 138 HDEDAYAKNRRAIVFLKGCRAN 159
E++ A +RR + + G + N
Sbjct: 162 DVEESNALSRRVVAQVVGSQGN 183
>gi|299773249|gb|ADJ38699.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 365
Score = 59.4 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 51/123 (41%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + G+ D +G +++ L
Sbjct: 239 AFSSDVLFDFGKANLKPASAQTLDAAHAEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 298
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 299 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQVQ 358
Query: 155 GCR 157
G +
Sbjct: 359 GSK 361
>gi|269128089|ref|YP_003301459.1| OmpA/MotB domain-containing protein [Thermomonospora curvata DSM
43183]
gi|268313047|gb|ACY99421.1| OmpA/MotB domain protein [Thermomonospora curvata DSM 43183]
Length = 365
Score = 59.4 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHAD 90
T + E++ + + S ++ V F T S + A + L+++ + L++ + + GH D
Sbjct: 71 TPIEETTEKGRKSFTLQADVLFKTGSADLSAAAEKYLADVVAKLKEANVTGEVQVVGHTD 130
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
++G ++AL RRA AV + + + G+ P G A +NRR
Sbjct: 131 DVGEPEDNLALSKRRAEAVVQAMQPQLANTGITLIPEGKGESEPREKGTSPQARQRNRRV 190
Query: 150 IV 151
+
Sbjct: 191 SI 192
>gi|114764496|ref|ZP_01443721.1| flagellar motor protein [Pelagibaca bermudensis HTCC2601]
gi|114543063|gb|EAU46082.1| flagellar motor protein [Roseovarius sp. HTCC2601]
Length = 634
Score = 59.4 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 42/120 (35%), Gaps = 14/120 (11%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIEGHADELG-----S 94
V F + P ++N+ L++ D ++GH D+
Sbjct: 512 FSSEVLFAPGEARLSPLGEGEIANIAGILQRVMSDIPPGIDWILRVDGHTDDTPLRPGAR 571
Query: 95 RNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA +V + V I R+ +G+ P +A A+NRR + L
Sbjct: 572 FADNWELSQARALSVVRFLVEDMGIPPQRLSANGFGEYQPVDPADSPEARAQNRRIELKL 631
>gi|114767081|ref|ZP_01445964.1| OmpA domain protein [Pelagibaca bermudensis HTCC2601]
gi|114540734|gb|EAU43800.1| OmpA domain protein [Roseovarius sp. HTCC2601]
Length = 310
Score = 59.4 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIA 100
E + + F++ S S+ + L + ++ E D L GH D GS ++IA
Sbjct: 194 EAKGHMILRDLRFESGSASLGDDAVASLDAIAAYLAETPDRRVLFVGHTDATGSLEANIA 253
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ RA A +Y +G++A+++ G P E +NRR L
Sbjct: 254 VSRARADAAMDYVRGKGVAAAQLGSEGAGYLAPVASNLTEVGREENRRVEAIL 306
>gi|209968928|gb|ACJ02825.1| outer membrane protein P5 [Haemophilus parasuis]
gi|224714287|gb|ACN62138.1| outer membrane protein A [Haemophilus parasuis]
Length = 365
Score = 59.4 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 51/123 (41%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + G+ D +G +++ L
Sbjct: 239 AFSSDVLFDFGKANLKPASAQTLDAAHAEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 298
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A +RR + ++
Sbjct: 299 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVEIQVQ 358
Query: 155 GCR 157
G +
Sbjct: 359 GSK 361
>gi|223041685|ref|ZP_03611882.1| outer membrane protein P5 precursor (OMP P5) [Actinobacillus minor
202]
gi|223017549|gb|EEF15963.1| outer membrane protein P5 precursor (OMP P5) [Actinobacillus minor
202]
Length = 344
Score = 59.4 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 50/143 (34%), Gaps = 12/143 (8%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIE 86
+ E + S V F ++PA Q L + + +
Sbjct: 201 GQGAAPVAAPQVETKNFSFSSDVLFAFGKSXLKPAAAQALDAANNEINALGLANPAIQVN 260
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE------ 140
G+ D +G ++ L RRA V NY V++G + + + YG P +
Sbjct: 261 GYXDRIGKZXXNLKLSQRRAETVANYLVSKGQNXANVTAVGYGXANPVTGNTCDAVKGRK 320
Query: 141 ---DAYAKNRRAIVFLKGCRANT 160
A +RR V ++G + T
Sbjct: 321 ALIACLAPDRRVEVQVQGSKEVT 343
>gi|149911636|ref|ZP_01900247.1| OmpA family protein [Moritella sp. PE36]
gi|149805306|gb|EDM65320.1| OmpA family protein [Moritella sp. PE36]
Length = 211
Score = 59.4 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/196 (19%), Positives = 71/196 (36%), Gaps = 41/196 (20%)
Query: 1 MQYSTIFI---ILSAITMMS-----ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD-- 50
M+ +IF+ +L ++ + P + E+ L + + V
Sbjct: 1 MKLLSIFLMSFLLLGCETIAEIQAKAAAPSTPTETTVMPKQMAQENDLSDDDADGVIAYR 60
Query: 51 -----------------------------SVFFDTSSYSIRPADIQVLSNLGSWLEKHD- 80
V F +S I P + L ++++ +
Sbjct: 61 EQCLNSVLGSQVNNSGCGGDTVNKVRQELKVNFSNNSAVISPRYFADIKALSNFMQHYPD 120
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHD 139
D +IEGH+ GS ++ L RRA AV + + + ++ R+ YG E G++
Sbjct: 121 LDVVIEGHSSRQGSAALNMDLSQRRAQAVMDLLINKFGISTSRVSAIGYGFERLLDEGNN 180
Query: 140 EDAYAKNRRAIVFLKG 155
A+ +NRR + L G
Sbjct: 181 SYAHQRNRRIVAELSG 196
>gi|90025228|gb|ABD85117.1| OmpA [Actinobacillus suis H91-0380]
Length = 373
Score = 59.4 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 49/126 (38%), Gaps = 12/126 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD S++PA L + + + G+ D +G S++ L
Sbjct: 247 AFSSDVLFDFGKSSLKPAAATALDAANTEIANLGLATPAIQVNGYTDRIGKEASNLKLSQ 306
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLK 154
RRA V NY V++G + + + YG+ P A +RR V ++
Sbjct: 307 RRAETVANYLVSKGQNPANVTAVGYGEANPVTGATCDAVKGRKALIACLAPDRRVEVQVQ 366
Query: 155 GCRANT 160
G + T
Sbjct: 367 GSKNVT 372
>gi|83647670|ref|YP_436105.1| outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hahella chejuensis KCTC 2396]
gi|83635713|gb|ABC31680.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hahella chejuensis KCTC 2396]
Length = 346
Score = 59.4 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 2/106 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNSSIALGLRRAYA 108
+VFF + D + L + +++ ++GH D G R + L RA A
Sbjct: 221 AVFFKLDESVLTDQDKRELDKVVLYVKADPSVTAIFVDGHTDSTGRRIYNRRLSKDRAEA 280
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
V Y + +G+++ ++ +G+ P V A+NRRA V L+
Sbjct: 281 VTAYLMDKGVASEKITTRYHGERYPVVQNAGPKNLARNRRATVRLE 326
>gi|71907621|ref|YP_285208.1| OmpA/MotB [Dechloromonas aromatica RCB]
gi|71847242|gb|AAZ46738.1| OmpA/MotB [Dechloromonas aromatica RCB]
Length = 195
Score = 59.4 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/195 (15%), Positives = 64/195 (32%), Gaps = 41/195 (21%)
Query: 1 MQYSTIFIILSAITMMSISGIDNL---DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS 57
M + + + L+ ++S + + + V+ E + +V
Sbjct: 1 MNKTILCVALAGSLVLSACTTERVVLLPSADGGQSAVVVRDPAGEVLLNQPYAAVKRRLD 60
Query: 58 SYSIRPADIQVLSNLGSWL--------------------------------------EKH 79
S + + + + + E+
Sbjct: 61 SNVGYQSSPEEVRERYANVLAAQPARPRSYVLYFEAGGNILTQESKAALVNIRKEIAERA 120
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ ++ GH D +GS + L L+RA + + + GISA +M+ G+ P V D
Sbjct: 121 ASEVMVIGHTDRVGSVEGNDKLSLQRAEGLRDLLIESGISAEKMEAVGRGERDPLVPTAD 180
Query: 140 EDAYAKNRRAIVFLK 154
E KNRR + ++
Sbjct: 181 EVDEPKNRRVEINVR 195
>gi|188592172|ref|YP_001796770.1| hypothetical protein RALTA_B0336 [Cupriavidus taiwanensis LMG
19424]
gi|170938546|emb|CAP63533.1| Putative transmembrane protein, OmpA/MotB motif [Cupriavidus
taiwanensis LMG 19424]
Length = 215
Score = 59.4 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 44/116 (37%), Gaps = 10/116 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD----FLIEGHADELG------SR 95
+ SV F +S ++P +L +L L + ++ G D+
Sbjct: 85 IGISGSVLFALNSAELQPEGRDLLRSLAQPLSAYLRSRDEILMVSGFTDDQQVREGNRRF 144
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ L +RA V + GI S + ++G + P D + AKNRR +
Sbjct: 145 ADNWELSAQRALTVTRTLIDAGIPPSSVFSAAFGSQQPVTPNADAASRAKNRRVEI 200
>gi|167586522|ref|ZP_02378910.1| OmpA/MotB domain protein [Burkholderia ubonensis Bu]
Length = 223
Score = 59.4 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 8/120 (6%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FD +++P Q L +L ++ + + ++ G+ D +GS + L LR
Sbjct: 94 ITYQADALFDFDKATLKPLGKQKLDDLAGKIQGMNTEVVVATGYTDRIGSDKYNDRLSLR 153
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY-------AKNRRAIVFLKGCR 157
RA AV +Y V++GI A+++ GK P G ++ A +RR V + G +
Sbjct: 154 RAQAVKSYLVSKGIPANKIYTEGKGKRNPVTTGCNQKNRKQLIACLAPDRRVEVEVVGTQ 213
>gi|163737814|ref|ZP_02145231.1| hypothetical protein RGBS107_19823 [Phaeobacter gallaeciensis
BS107]
gi|161389340|gb|EDQ13692.1| hypothetical protein RGBS107_19823 [Phaeobacter gallaeciensis
BS107]
Length = 655
Score = 59.4 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 41/125 (32%), Gaps = 14/125 (11%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE--------KHDCDFLIEGHADE-- 91
E V F S + A + + L+ + + ++GH D+
Sbjct: 527 EGDRFVFASEVLFAPGSADLSSAGRAEIGKVAGILQAVAAAIPPEINWIIRVDGHTDDTP 586
Query: 92 ---LGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+ L RA +V Y A GI R+ +G+ P A A+NR
Sbjct: 587 LGIHPKFADNWELSQGRALSVVRYMVQALGIPPERLSANGFGEYQPVNPAPTAVARAQNR 646
Query: 148 RAIVF 152
R +
Sbjct: 647 RIELK 651
>gi|126728270|ref|ZP_01744086.1| hypothetical protein SSE37_19807 [Sagittula stellata E-37]
gi|126711235|gb|EBA10285.1| hypothetical protein SSE37_19807 [Sagittula stellata E-37]
Length = 911
Score = 59.4 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 47/126 (37%), Gaps = 14/126 (11%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK--------HDCDFLIEGHADELG 93
E V F+ S + P + ++ + + L + D ++GH D +
Sbjct: 783 EGDRFVFSSEVLFEQGSADLSPLGRREIAKVSNILRRLARDIPDEIDWIIRVDGHTDNVP 842
Query: 94 -----SRNSSIALGLRRAYAV-FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+ L RA AV + GI +R+ +G+ P + +A A+NR
Sbjct: 843 VRGSAEFEDNWDLSQARARAVVKDMIDNYGIPPNRLAANGFGEYQPVNPANTAEARAQNR 902
Query: 148 RAIVFL 153
R + L
Sbjct: 903 RIELKL 908
>gi|312129756|ref|YP_003997096.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132]
gi|311906302|gb|ADQ16743.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132]
Length = 800
Score = 59.4 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 50/127 (39%), Gaps = 5/127 (3%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIE 86
+P E + S V V F+ S ++ P L+ + +++ H I
Sbjct: 675 TLTPLPTAPEKMEAKVGKSYVLTGVNFEQSQTTMLPGSEDKLAEVLQFMKDHPNVKIEII 734
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
GH ++ G ++ L RA V N+ +GI++SR+ G P A N
Sbjct: 735 GHTEKAGDERQNVRLSEFRARTVANWLFNKGIASSRITTAGKGSAEPIDPNDA----AVN 790
Query: 147 RRAIVFL 153
RR V +
Sbjct: 791 RRIEVKV 797
>gi|307727249|ref|YP_003910462.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003]
gi|307587774|gb|ADN61171.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003]
Length = 219
Score = 59.4 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 46/116 (39%), Gaps = 10/116 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLG----SWLEKHDCDFLIEGHADELG------SR 95
+ +V F +S ++P +L +L ++L +D ++ G D+
Sbjct: 88 IGISGNVLFALNSDQLQPQGRDLLKSLAGPLSAYLRANDEMLMVSGFTDDQRLREGNRRF 147
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ L +RA V + G+ S + ++G P DE A+NRR +
Sbjct: 148 ADNWELSAQRALTVTRALIDAGVPVSSVFAAAFGSGQPVSSNADEQGRARNRRVEI 203
>gi|254480140|ref|ZP_05093388.1| OmpA family protein [marine gamma proteobacterium HTCC2148]
gi|214039702|gb|EEB80361.1| OmpA family protein [marine gamma proteobacterium HTCC2148]
Length = 213
Score = 59.4 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 51/130 (39%), Gaps = 10/130 (7%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD----FLIE 86
+ + + SV F +S ++ ++LS+L L+ + + ++
Sbjct: 69 AAPLASGRITLRDGRIGISGSVLFALNSDQLQAEGRELLSSLIPPLKLYLLEQNDLLMVS 128
Query: 87 GHADE------LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
G D+ N + L +RA V + G+ S + ++G E P V D
Sbjct: 129 GFTDDLPIQDGNLHFNDNWELSAQRALTVTRALIEEGMPPSLVFAAAFGAEQPVVANTDS 188
Query: 141 DAYAKNRRAI 150
++ ++NRR
Sbjct: 189 ESRSRNRRVE 198
>gi|150388324|ref|YP_001318373.1| OmpA/MotB domain-containing protein [Alkaliphilus metalliredigens
QYMF]
gi|149948186|gb|ABR46714.1| OmpA/MotB domain protein [Alkaliphilus metalliredigens QYMF]
Length = 314
Score = 59.4 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 53/128 (41%), Gaps = 14/128 (10%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---------FLIEGHAD 90
+ + + + + + FD +SY I+PA QVL L E D I+GH D
Sbjct: 162 IADNGNIVIDEELVFDLNSYQIKPAGRQVLDELAMAFENILRDPEVRVNIDAINIQGHTD 221
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGI-----SASRMKVTSYGKEMPSVYGHDEDAYAK 145
++GS + L R+ V NY + AS ++Y K P E A+
Sbjct: 222 DIGSAEYNRNLSANRSVEVVNYLLNSNPTLENRYASYFMASAYSKFRPIASNATEANRAQ 281
Query: 146 NRRAIVFL 153
NRR + +
Sbjct: 282 NRRIEISI 289
>gi|217034137|ref|ZP_03439557.1| hypothetical protein HP9810_868g30 [Helicobacter pylori 98-10]
gi|216943421|gb|EEC22877.1| hypothetical protein HP9810_868g30 [Helicobacter pylori 98-10]
Length = 255
Score = 59.4 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/152 (15%), Positives = 51/152 (33%), Gaps = 7/152 (4%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS-SYSIRPADIQV 68
+++ + S I+ + + + ++ F+ + S +I +
Sbjct: 82 MASESSKPASQNTETKATIARKGEGSVLEQIDQGSILKLPSNLLFENATSDAINQDMMLY 141
Query: 69 LSNLGSWLEKHDCDFLIEGHA---DELGS---RNSSIALGLRRAYAVFNYFVARGISASR 122
L + ++K I D + S L RAY V + G++ ++
Sbjct: 142 LERIAKIIQKLPKRVHINVRGFTDDTPLTKTRFKSHYELAANRAYRVMKVLIQYGVNPNQ 201
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ +SYG P + KN R +F
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEIFFS 233
>gi|325518447|gb|EGC98149.1| OOP family OmpA-OmpF porin [Burkholderia sp. TJI49]
Length = 207
Score = 59.4 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 62/151 (41%), Gaps = 8/151 (5%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
+ + D + V + + FD +++P Q L L S
Sbjct: 47 ATANAKCDGALVAQAPQPPVAPVAPAITSQKITYQADALFDFDKATLKPLGKQKLDELAS 106
Query: 75 WLEKHDCDFLI-EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
+E + + ++ G+ D +GS + L LRRA AV +Y V++G+ A+++ GK P
Sbjct: 107 KIEGMNTEVVVATGYTDRIGSDKYNDRLSLRRAQAVKSYLVSKGVPANKIYTEGKGKRNP 166
Query: 134 SVYGHDEDAY-------AKNRRAIVFLKGCR 157
G ++ A +RR V + G +
Sbjct: 167 VTTGCNQKNRKQLIACLAPDRRVEVEVVGTQ 197
>gi|262396480|ref|YP_003288333.1| putative sodium-type flagellar protein MotY precursor [Vibrio sp.
Ex25]
gi|262340074|gb|ACY53868.1| putative sodium-type flagellar protein MotY precursor [Vibrio sp.
Ex25]
Length = 339
Score = 59.4 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FD + + L+ L S++ + LI+GH D +GS +++++ RA V
Sbjct: 211 FDFGQKVLSRKQQETLAALNSYVSVDDRVTKILIDGHTDNVGSSLANLSVSRTRAEQVAE 270
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V GI S ++ ++G P + AKNRR + L
Sbjct: 271 ALVELGIDKSMIETRAHGSRYPIASNNSTKGQAKNRRVTLRL 312
>gi|85704170|ref|ZP_01035273.1| flagellar motor protein [Roseovarius sp. 217]
gi|85671490|gb|EAQ26348.1| flagellar motor protein [Roseovarius sp. 217]
Length = 563
Score = 59.4 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 40/120 (33%), Gaps = 14/120 (11%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIEGHADELGS----- 94
V F + A ++ + L D ++GH D++
Sbjct: 441 FSSEVLFAPGEAELSLAGEGEIAKVAGILRNVIGDIPEGIDWVLQVDGHTDDVPIVEGAR 500
Query: 95 RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ AL RA +V Y G A R+ YG+ P A A+NRR + L
Sbjct: 501 FADNWALSQARALSVVRYLTGVLGFPAERLSANGYGEFQPVNPDDTAAARAQNRRIELKL 560
>gi|332280324|ref|ZP_08392737.1| OmpA/MotB:SmpA/OmlA [Shigella sp. D9]
gi|332102676|gb|EGJ06022.1| OmpA/MotB:SmpA/OmlA [Shigella sp. D9]
Length = 245
Score = 59.4 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 54/135 (40%), Gaps = 9/135 (6%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEG 87
+ ++S+Q +S F + + + + L +L L + ++ G
Sbjct: 106 PQVPLSPKTSIQRYTLNSDTLFAFDKSGTSDMSQQGLADLDHLAMNLNSFEKINGIIVIG 165
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA--- 144
H D LGS + ++ L +RA V Y +A+G+ A ++ GK P + A
Sbjct: 166 HTDRLGSEDYNLTLSRKRAETVRQYLIAKGLPAEKITSIGMGKSQPVKKCKYNNDRASLI 225
Query: 145 ----KNRRAIVFLKG 155
NRR V + G
Sbjct: 226 VCLQPNRRVEVEVDG 240
>gi|120436189|ref|YP_861875.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
gi|117578339|emb|CAL66808.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
Length = 620
Score = 59.4 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 7/141 (4%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
IS +D+ + + D L+ E + D+++FD +IRP L L + ++
Sbjct: 478 ISTMDSDEKEEMIYDIELSPVKDVEYLAEI--DNIYFDFDKSNIRPDAATELDKLVALMK 535
Query: 78 KHDCD--FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPS 134
+ I H D G+ + + L RRA + ++Y V++GIS R+ + YG+ P+
Sbjct: 536 DEYPELVIEIGSHTDRRGTNSYNEKLAERRAKSTYDYLVSKGISEDRIVEFKGYGETKPA 595
Query: 135 VYGH--DEDAYAKNRRAIVFL 153
+ E + NRR++ +
Sbjct: 596 IDCDRCSEKDHQLNRRSMFSV 616
>gi|21244837|ref|NP_644419.1| hypothetical protein XAC4120 [Xanthomonas axonopodis pv. citri str.
306]
gi|21110541|gb|AAM38955.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 451
Score = 59.4 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 44/123 (35%), Gaps = 5/123 (4%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG--- 93
+ Q + + F + + +++ + + +E+ ++ GH D++
Sbjct: 326 DEQADGQTRVRLSSAAMFASGGVEVELQQRGLIAQIAAAIEQLPGRVIVVGHTDDVPVRS 385
Query: 94 -SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV-YGHDEDAYAKNRRAIV 151
+ AL RA A+ A+ + R++ G P A+NRR +
Sbjct: 386 LRFQDNYALSAARAQALAQVLQAQLSTPGRVEAIGAGASQPIAQPVQLPANRARNRRVEI 445
Query: 152 FLK 154
+
Sbjct: 446 LFQ 448
>gi|78484705|ref|YP_390630.1| OmpA/MotB [Thiomicrospira crunogena XCL-2]
gi|78362991|gb|ABB40956.1| OmpA/MotB family protein [Thiomicrospira crunogena XCL-2]
Length = 230
Score = 59.4 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 23/72 (31%), Gaps = 1/72 (1%)
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYA 144
+ D ++ L RA V + VT YGK P + A
Sbjct: 147 DDQIDPQSPLRNNWFLSTMRAQNVMKSLYQSSELKQSQFGVTGYGKYRPVASNETREGKA 206
Query: 145 KNRRAIVFLKGC 156
KNRR V +
Sbjct: 207 KNRRVQVMISAT 218
>gi|260591055|ref|ZP_05856513.1| OmpA family protein [Prevotella veroralis F0319]
gi|260536920|gb|EEX19537.1| OmpA family protein [Prevotella veroralis F0319]
Length = 695
Score = 59.4 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 47/132 (35%), Gaps = 28/132 (21%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
D++F+D ++RP + L +L E + + H D +GS + + L RRA A
Sbjct: 529 DNIFYDFDKATLRPESEKALDDLVKLLNENPNVTIELSAHTDCIGSADYNKRLSQRRADA 588
Query: 109 VFNYFVARGISASRMKVTSYGKEMP-------------SVYGH--------------DED 141
V Y A GI+ R+ YGKE P E
Sbjct: 589 VVAYLTAHGIAQDRLTPVGYGKERPKKIRKKLTEKYNWLKENDVLTEDFIKKLPKDKQEV 648
Query: 142 AYAKNRRAIVFL 153
NRR +
Sbjct: 649 CNQLNRRTEFIV 660
>gi|260428375|ref|ZP_05782354.1| peptidoglycan-binding domain 1 protein [Citreicella sp. SE45]
gi|260422867|gb|EEX16118.1| peptidoglycan-binding domain 1 protein [Citreicella sp. SE45]
Length = 817
Score = 59.4 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 10/143 (6%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVL-- 69
A T + + + S + ++ F + + F S ++ VL
Sbjct: 197 AATAEPAAPLSRQEEIALSQSSPGRVTATLRPFRFVLEN---FAIDSARLKDEHRAVLAE 253
Query: 70 -SNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L + E +I GHADE G + L +RRA AV ++ + +
Sbjct: 254 LRRLIAVAEPGALRVVIVGHADESGPELHNSGLSVRRARAVRTALGRASVAG----IAGF 309
Query: 129 GKEMPSVYGHDEDAYAKNRRAIV 151
G+ P +A ++NRR +
Sbjct: 310 GEAAPLDPADSVEARSRNRRVEI 332
>gi|330820825|ref|YP_004349687.1| OmpA/MotB [Burkholderia gladioli BSR3]
gi|327372820|gb|AEA64175.1| OmpA/MotB [Burkholderia gladioli BSR3]
Length = 228
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 49/131 (37%), Gaps = 10/131 (7%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG----SWLEKHDCDFLIE 86
+ + +V F +S ++P +L +L ++L D ++
Sbjct: 70 AGPLAAGRVTLVDGRIGIAGNVLFAVNSDQLQPEGRDLLRSLAGPLTAYLHDRDQILMVS 129
Query: 87 GHADEL------GSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
G AD+ + L RA V F+ G+ A+ + ++G E P DE
Sbjct: 130 GFADDQLVRAGNRRFADNWELSAERALTVTRAFIDSGVPAASVFAAAFGSEQPVSSNADE 189
Query: 141 DAYAKNRRAIV 151
A+NRR +
Sbjct: 190 AGRARNRRVEI 200
>gi|163737130|ref|ZP_02144548.1| OmpA domain protein [Phaeobacter gallaeciensis BS107]
gi|161389734|gb|EDQ14085.1| OmpA domain protein [Phaeobacter gallaeciensis BS107]
Length = 326
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 2/142 (1%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
T + G D T + + +V + F+T + ++ L+ L
Sbjct: 182 TTSASGGSDAAPTVALPLIGAAELITGLRRNGRAVLADLEFETGAVTLGAKPYDSLAALA 241
Query: 74 SW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKE 131
+ ++ D D L+ GH D +GS +IA+ RRA AV +A + +R+ V G
Sbjct: 242 EFLIQNPDFDVLLVGHTDTVGSLEQNIAISERRADAVRRRLLADSAVDRARVAVAGAGFM 301
Query: 132 MPSVYGHDEDAYAKNRRAIVFL 153
P + NRR V L
Sbjct: 302 APLTTNLTPEGREANRRVEVVL 323
>gi|120553263|ref|YP_957614.1| OmpA/MotB domain-containing protein [Marinobacter aquaeolei VT8]
gi|120323112|gb|ABM17427.1| OmpA/MotB domain protein [Marinobacter aquaeolei VT8]
Length = 348
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 41/118 (34%), Gaps = 12/118 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIEGHAD----ELGSR 95
+ + F ++S + Q L L L I+GH D
Sbjct: 228 LPSELLFASASAELGEEGRQELDKLADLLLDVSSRIPDDVDWILRIDGHTDMLPINTQRF 287
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA AV Y G+ RM +G+ P G +A +NRR + L
Sbjct: 288 PSNWELSTARAVAVVRYLATEGVPERRMAAAGFGEFFPVADGTSPEALQRNRRIELKL 345
>gi|320533459|ref|ZP_08034136.1| OmpA family protein [Actinomyces sp. oral taxon 171 str. F0337]
gi|320134317|gb|EFW26588.1| OmpA family protein [Actinomyces sp. oral taxon 171 str. F0337]
Length = 490
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 49/142 (34%), Gaps = 3/142 (2%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
+ + ++ + D L + + + + V F S + A L +
Sbjct: 145 VTEQAAASPIEINSRTVDGSLGARTGGKDVTIVMASDVTFAPDSADLAAAAEAQLQTVAG 204
Query: 75 WLEKHD--CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKE 131
+ ++ I GH D++ + AL +RA V V G+
Sbjct: 205 QIAQYPDGGTLTIVGHTDDVQDDAYNQALSEKRANTVKTRLGQLTGLDKWNPSVAGKGES 264
Query: 132 MPSVYGHDEDAYAKNRRAIVFL 153
P V G ++A A NRR + L
Sbjct: 265 EPRVSGTTDEARAANRRVEITL 286
>gi|56460901|ref|YP_156182.1| Sodium-type flagellar protein motY precursor [Idiomarina loihiensis
L2TR]
gi|56179911|gb|AAV82633.1| Sodium-type flagellar protein motY precursor [Idiomarina loihiensis
L2TR]
Length = 298
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
S + + + L + +L+ + L++ + D LG+R + L +RA + +FV
Sbjct: 192 DSEKLTLSSQRKLKQISDYLQVDNELELVLVDAYTDSLGARGPNQELTEQRAKEIQQFFV 251
Query: 115 ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RGI A R+K ++G++ P +E NRR IV L
Sbjct: 252 ERGIDAERIKTVAHGEDRPVKSNDNEINRQINRRVIVQL 290
>gi|254561554|ref|YP_003068649.1| flagellar motor protein MotB [Methylobacterium extorquens DM4]
gi|254268832|emb|CAX24793.1| flagellar motor protein MotB [Methylobacterium extorquens DM4]
Length = 337
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 47/118 (39%), Gaps = 12/118 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLG--------SWLEKHDCDFLIEGHADELGS----R 95
+ V F S +++P L + ++GH D
Sbjct: 217 LQSEVLFAAGSAALKPEAGPELDRIAGAILDIAREIPADIPWVLRVDGHTDARPIQSAQF 276
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ AL RA AV Y ++G+ R+ ++G+ P G E+AY++NRR + L
Sbjct: 277 PSNWALSASRAIAVVQYLRSKGLPPQRLLAGAFGEFQPLDSGTSEEAYSRNRRIEMKL 334
>gi|163851783|ref|YP_001639826.1| OmpA/MotB domain-containing protein [Methylobacterium extorquens
PA1]
gi|218530589|ref|YP_002421405.1| OmpA/MotB domain protein [Methylobacterium chloromethanicum CM4]
gi|240138946|ref|YP_002963421.1| flagellar motor protein MotB [Methylobacterium extorquens AM1]
gi|163663388|gb|ABY30755.1| OmpA/MotB domain protein [Methylobacterium extorquens PA1]
gi|218522892|gb|ACK83477.1| OmpA/MotB domain protein [Methylobacterium chloromethanicum CM4]
gi|240008918|gb|ACS40144.1| flagellar motor protein MotB [Methylobacterium extorquens AM1]
Length = 337
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 47/118 (39%), Gaps = 12/118 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLG--------SWLEKHDCDFLIEGHADELGS----R 95
+ V F S +++P L + ++GH D
Sbjct: 217 LQSEVLFAAGSAALKPEAGPELDRIAGAILDIAREIPADIPWVLRVDGHTDARPIQSAQF 276
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ AL RA AV Y ++G+ R+ ++G+ P G E+AY++NRR + L
Sbjct: 277 PSNWALSASRAIAVVQYLRSKGLPPQRLLAGAFGEFQPLDSGTSEEAYSRNRRIEMKL 334
>gi|126725971|ref|ZP_01741813.1| OmpA family protein [Rhodobacterales bacterium HTCC2150]
gi|126705175|gb|EBA04266.1| OmpA family protein [Rhodobacterales bacterium HTCC2150]
Length = 224
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/180 (22%), Positives = 71/180 (39%), Gaps = 27/180 (15%)
Query: 1 MQYSTIFIILSAITMMSISGID-----------------------NLDTKISSPDTVLNE 37
M +T ++ G ++ +
Sbjct: 1 MNMFKKTFTFIILTSVAACGSQQLITSNFNKPIGSELDEGRFGNPTMNNMLIHSGQKSAT 60
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRN 96
L ++F S V +V F +S + A L +W+ + F + GH D +G
Sbjct: 61 FDLAQRFDSEVIPTVNFAFNSAKLDGAAQATLQQQATWIRQFPEVRFRVYGHTDLVGGNR 120
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVT-SYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+ LGLRRA +V N+F+++GI R++ S+G+E P V+ E+ +NRR + + G
Sbjct: 121 FNKRLGLRRAQSVVNFFISQGIGRDRLEAVASFGEEQPIVFTQTEE--RQNRRTVTQVSG 178
>gi|84393843|ref|ZP_00992588.1| putative outer membrane protein [Vibrio splendidus 12B01]
gi|84375538|gb|EAP92440.1| putative outer membrane protein [Vibrio splendidus 12B01]
Length = 203
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/186 (17%), Positives = 64/186 (34%), Gaps = 31/186 (16%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDS--------- 51
M T ++ + + I +P+ + V
Sbjct: 1 MMKVTYLLLPVLTMTLFACSSQQEEAYIETPEAEQIADLQDDDNDGVVNARDTCPGTPEA 60
Query: 52 ---------------------VFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHA 89
+ F S+ + P +S + +LE + I+G+A
Sbjct: 61 SQVDNDGCGETIRAEEVRQLKILFAHDSFEVNPIFSDQISTMAEFLETYKSASIEIQGYA 120
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
++GS ++ L RRA V + ++ GI R+++ YG+E G D ++A NR+
Sbjct: 121 SKVGSNEYNLDLSKRRANNVQDELLSNGIEPERVRIVGYGEERLENEGDDATSHALNRKV 180
Query: 150 IVFLKG 155
+ G
Sbjct: 181 TATVVG 186
>gi|188581568|ref|YP_001925013.1| OmpA/MotB domain protein [Methylobacterium populi BJ001]
gi|179345066|gb|ACB80478.1| OmpA/MotB domain protein [Methylobacterium populi BJ001]
Length = 337
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 46/118 (38%), Gaps = 12/118 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLG--------SWLEKHDCDFLIEGHADELGS----R 95
+ V F S +++P L + ++GH D
Sbjct: 217 LQSEVLFAAGSAALKPEAGPELDRIAGAILDIAKEIPADIPWVLRVDGHTDARPIQSAQF 276
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ AL RA AV Y +GI R+ ++G+ P G EDAYA+NRR + L
Sbjct: 277 PSNWALSAARAIAVVQYLRTKGIPPQRLLAGAFGEFQPLDSGTSEDAYARNRRIEMKL 334
>gi|90408165|ref|ZP_01216333.1| flagellar motor protein [Psychromonas sp. CNPT3]
gi|90310695|gb|EAS38812.1| flagellar motor protein [Psychromonas sp. CNPT3]
Length = 299
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 42/129 (32%), Gaps = 5/129 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
+ + SL +Q + + F + S ++P V+ + L I GH D
Sbjct: 157 QEGAIEIESLGQQLIIRIREKGAFPSGSAFLQPRFRPVIRKVAKILADIPGVITISGHTD 216
Query: 91 ELGSR----NSSIALGLRRAYAVF-NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
S+ L +RA +V + I + V Y P +
Sbjct: 217 NEQVHSELYRSNWDLSAQRAVSVAHEMLKIKKIRNKHLVVAGYANSKPLTDSKILSERKR 276
Query: 146 NRRAIVFLK 154
NRR + +
Sbjct: 277 NRRVEIMIM 285
>gi|325925657|ref|ZP_08187038.1| Type VI secretion system OmpA/MotB domain protein [Xanthomonas
perforans 91-118]
gi|325543930|gb|EGD15332.1| Type VI secretion system OmpA/MotB domain protein [Xanthomonas
perforans 91-118]
Length = 425
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 44/123 (35%), Gaps = 5/123 (4%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG--- 93
+ Q + + F + + P +++ + + +E+ ++ GH D++
Sbjct: 300 DEQADGQTRVRLSSAAMFASGGVEVEPQQRGLIAQIAAAIEQLPGRVIVVGHTDDVPVRS 359
Query: 94 -SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV-YGHDEDAYAKNRRAIV 151
+ AL RA A+ A+ + R+ G P A+NRR +
Sbjct: 360 LRFQDNYALSAARAQALAQVLQAQLSTPGRVDAIGAGDSQPIARPVQLPANRARNRRVEI 419
Query: 152 FLK 154
+
Sbjct: 420 LFQ 422
>gi|66770081|ref|YP_244843.1| hypothetical protein XC_3783 [Xanthomonas campestris pv. campestris
str. 8004]
gi|77747955|ref|NP_639058.2| hypothetical protein XCC3712 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|188993294|ref|YP_001905304.1| hypothetical protein xccb100_3899 [Xanthomonas campestris pv.
campestris str. B100]
gi|66575413|gb|AAY50823.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
gi|167735054|emb|CAP53266.1| OmpA family protein [Xanthomonas campestris pv. campestris]
Length = 215
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 10/116 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD----FLIEGHAD------ELGSR 95
+ SV F +S ++P +VL +L + L ++ +I G D
Sbjct: 85 IGIRGSVLFALNSDQLQPEGREVLKSLAAPLSEYLVSREEILMISGFTDDRPVLDSNRRY 144
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ L +RA V +A G+ AS + ++G + P DE AKNRR +
Sbjct: 145 ADNWELSAQRALTVTRALIAEGVPASSVFAAAFGSQQPVDSNADETRRAKNRRVEI 200
>gi|146298593|ref|YP_001193184.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
UW101]
gi|146153011|gb|ABQ03865.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
Length = 314
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 46/115 (40%), Gaps = 7/115 (6%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGS-----RNSSI 99
S+ + + F++ S+++ + + LG + D LIEGH D+ ++
Sbjct: 185 VSMENKLLFNSGSWAVGTEGRRAVVELGKVLGDNPDLSVLIEGHTDDDPYAGSGPIANNW 244
Query: 100 ALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L +RA A+ I+ ++ + P + AKNRR + L
Sbjct: 245 DLSTKRATAIVAILSENPKINKQKLTAAGRSEFSPLASNATPEGKAKNRRIEIIL 299
>gi|15594625|ref|NP_212414.1| flagellar motor protein MotB [Borrelia burgdorferi B31]
gi|195941366|ref|ZP_03086748.1| flagellar motor protein MotB [Borrelia burgdorferi 80a]
gi|216264425|ref|ZP_03436417.1| flagellar motor apparatus [Borrelia burgdorferi 156a]
gi|218249216|ref|YP_002374803.1| flagellar motor apparatus [Borrelia burgdorferi ZS7]
gi|221217732|ref|ZP_03589200.1| flagellar motor apparatus [Borrelia burgdorferi 72a]
gi|223888999|ref|ZP_03623590.1| flagellar motor apparatus [Borrelia burgdorferi 64b]
gi|224533159|ref|ZP_03673759.1| flagellar motor apparatus [Borrelia burgdorferi WI91-23]
gi|224533695|ref|ZP_03674283.1| flagellar motor apparatus [Borrelia burgdorferi CA-11.2a]
gi|225549020|ref|ZP_03769995.1| flagellar motor apparatus [Borrelia burgdorferi 94a]
gi|225550090|ref|ZP_03771050.1| flagellar motor apparatus [Borrelia burgdorferi 118a]
gi|226320581|ref|ZP_03796141.1| flagellar motor apparatus [Borrelia burgdorferi 29805]
gi|226321598|ref|ZP_03797124.1| flagellar motor apparatus [Borrelia burgdorferi Bol26]
gi|1165265|gb|AAA85604.1| MotB [Borrelia burgdorferi]
gi|1185054|gb|AAB58963.1| flagellar motor apparatus [Borrelia burgdorferi]
gi|2688186|gb|AAC66668.1| flagellar motor rotation protein B (motB) [Borrelia burgdorferi
B31]
gi|215980898|gb|EEC21705.1| flagellar motor apparatus [Borrelia burgdorferi 156a]
gi|218164404|gb|ACK74465.1| flagellar motor apparatus [Borrelia burgdorferi ZS7]
gi|221192409|gb|EEE18628.1| flagellar motor apparatus [Borrelia burgdorferi 72a]
gi|223885815|gb|EEF56914.1| flagellar motor apparatus [Borrelia burgdorferi 64b]
gi|224511886|gb|EEF82287.1| flagellar motor apparatus [Borrelia burgdorferi WI91-23]
gi|224512988|gb|EEF83351.1| flagellar motor apparatus [Borrelia burgdorferi CA-11.2a]
gi|225369202|gb|EEG98655.1| flagellar motor apparatus [Borrelia burgdorferi 118a]
gi|225370246|gb|EEG99684.1| flagellar motor apparatus [Borrelia burgdorferi 94a]
gi|226232787|gb|EEH31540.1| flagellar motor apparatus [Borrelia burgdorferi Bol26]
gi|226234000|gb|EEH32721.1| flagellar motor apparatus [Borrelia burgdorferi 29805]
gi|312147980|gb|ADQ30639.1| flagellar motor apparatus [Borrelia burgdorferi JD1]
gi|312149596|gb|ADQ29667.1| flagellar motor apparatus [Borrelia burgdorferi N40]
Length = 260
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 44/138 (31%), Gaps = 15/138 (10%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSY----SIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ + S+ FFD++S IQ +++ +L +F IE
Sbjct: 109 QSKNIVVRQEERGIVISLAADAFFDSASADVKLEENRDSIQKIASFIGFLSPRGYNFKIE 168
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARG-----------ISASRMKVTSYGKEMPSV 135
GH D + + + A + + + +V+ +G P
Sbjct: 169 GHTDNIDTDVNGPWKSNWELSAARSVNMLEHILNYLDQSDVKRIENNFEVSGFGGSRPIA 228
Query: 136 YGHDEDAYAKNRRAIVFL 153
+ A NRR + +
Sbjct: 229 TDDTPEGRAYNRRIDILI 246
>gi|332995422|gb|AEF05477.1| OmpA/MotB [Alteromonas sp. SN2]
Length = 393
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 5/141 (3%)
Query: 21 IDNLDTKISSPDTVLNES---SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
+D D + V ++ ++ ++ + + V FD S ++ +S +++
Sbjct: 246 VDAKDMCPDTAAGVKVDAKGCTVFDEETVEITLRVLFDNESSVVKAPRDPEISEFAEFMK 305
Query: 78 KH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSV 135
++ + +IEGH GS ++ L RA + I ASR++ YG+
Sbjct: 306 QYTNTTAVIEGHTSAPGSEAYNMDLSEDRAASFKEVMVDMYDIDASRLETVGYGETRLLD 365
Query: 136 YGHDEDAYAKNRRAIVFLKGC 156
+ +A+ NRR V +K
Sbjct: 366 TAKNAEAHRVNRRISVTVKDT 386
>gi|206603227|gb|EDZ39707.1| Putative outer membrane protein, OmpA/MotB family [Leptospirillum
sp. Group II '5-way CG']
Length = 179
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 66/170 (38%), Gaps = 23/170 (13%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDT--------------VLNESSLQE 42
M+++ I+ + I + N + +T N SS Q
Sbjct: 1 MRFNKTLMGVSILFAGILVTGGCASTNGAGAGTQSNTTESAPAPAPAPAPEASNASSTQS 60
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIAL 101
SS+ + + + D ++L + +I GHADE G+ +I L
Sbjct: 61 DIESSLSRDITYGFDKSVLTSEDRRILKKDAAILNANPTVHVVIAGHADERGTDTYNIVL 120
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKE----MPSVYGHDEDAYAKNR 147
G +RA A Y V GI +R+K+ SYGK H+E ++KNR
Sbjct: 121 GQKRAKAAMMYLVNLGIKKNRIKIVSYGKRTIPGYDLCSDHNEQCWSKNR 170
>gi|91784820|ref|YP_560026.1| OmpA/MotB family outer membrane protein [Burkholderia xenovorans
LB400]
gi|91688774|gb|ABE31974.1| outer membrane protein, OmpA/MotB family [Burkholderia xenovorans
LB400]
Length = 215
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 8/119 (6%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FD ++P + L +L S + + + ++ G+ D +GS + L LR
Sbjct: 94 ITYQADALFDFDKAILKPGGKEKLDDLASKIGSLNLEVVVATGYTDRIGSDKYNDRLSLR 153
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY-------AKNRRAIVFLKGC 156
RA AV Y V++GI ++R+ GK P G ++ A +RR V + G
Sbjct: 154 RAQAVKAYLVSKGIESNRIYTEGKGKRNPVTTGCNQKNRKQLIACLAPDRRVEVEVVGT 212
>gi|78049766|ref|YP_365941.1| hypothetical protein XCV4210 [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|78038196|emb|CAJ25941.1| putative membrane protein [Xanthomonas campestris pv. vesicatoria
str. 85-10]
Length = 418
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/123 (16%), Positives = 44/123 (35%), Gaps = 5/123 (4%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG--- 93
+ Q + + F + + P +++ + + +E+ ++ GH D++
Sbjct: 293 DEQADGQTRVRLSSAAMFASGGVEVEPQQRGLIAQIAAAIEQLPGRVIVVGHTDDVPVRS 352
Query: 94 -SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV-YGHDEDAYAKNRRAIV 151
+ AL RA A+ A+ + R+ G P A+NRR +
Sbjct: 353 LRFQDNYALSAARAQALAQVLQAQLSTPGRVDAIGAGDSQPIARPVQLPANRARNRRVEI 412
Query: 152 FLK 154
+
Sbjct: 413 LFQ 415
>gi|327404631|ref|YP_004345469.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
16823]
gi|327320139|gb|AEA44631.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
Length = 798
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 52/131 (39%), Gaps = 14/131 (10%)
Query: 34 VLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADEL 92
NE+ + + ++FD + + IRP + L + ++ + + H D
Sbjct: 669 AKNEAGTDIGLNV---NPIYFDYNKWDIRPDAAKELDKIVEIMKKNPNIKIELGSHTDSR 725
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD----------EDA 142
G + +I L +RA A Y V++GI+A R+ YG+ V E
Sbjct: 726 GKDDYNIKLSDQRAKASARYIVSKGIAAGRITGKGYGETKLKVSDEQINNMPKWDEKEKG 785
Query: 143 YAKNRRAIVFL 153
+ NRR +
Sbjct: 786 HQLNRRTEFII 796
>gi|296534740|ref|ZP_06897115.1| outer membrane protein MopB [Roseomonas cervicalis ATCC 49957]
gi|296264932|gb|EFH11182.1| outer membrane protein MopB [Roseomonas cervicalis ATCC 49957]
Length = 97
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 36/78 (46%)
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ GHAD GS + L RRA AV V +G+S S + V ++G+ P V
Sbjct: 20 RTQTTRIEVAGHADRSGSPQYNQRLSQRRADAVAAELVRQGVSRSAITVQAFGESRPLVP 79
Query: 137 GHDEDAYAKNRRAIVFLK 154
D +NRR + L+
Sbjct: 80 TADGVREPQNRRVEIVLR 97
>gi|212693137|ref|ZP_03301265.1| hypothetical protein BACDOR_02644 [Bacteroides dorei DSM 17855]
gi|237709882|ref|ZP_04540363.1| outer membrane protein [Bacteroides sp. 9_1_42FAA]
gi|237725448|ref|ZP_04555929.1| outer membrane protein [Bacteroides sp. D4]
gi|254881970|ref|ZP_05254680.1| outer membrane protein [Bacteroides sp. 4_3_47FAA]
gi|265753535|ref|ZP_06088890.1| outer membrane protein [Bacteroides sp. 3_1_33FAA]
gi|294776453|ref|ZP_06741929.1| OmpA family protein [Bacteroides vulgatus PC510]
gi|319641023|ref|ZP_07995729.1| OmpA family Outer membrane protein [Bacteroides sp. 3_1_40A]
gi|212664242|gb|EEB24814.1| hypothetical protein BACDOR_02644 [Bacteroides dorei DSM 17855]
gi|229436135|gb|EEO46212.1| outer membrane protein [Bacteroides dorei 5_1_36/D4]
gi|229455975|gb|EEO61696.1| outer membrane protein [Bacteroides sp. 9_1_42FAA]
gi|254834763|gb|EET15072.1| outer membrane protein [Bacteroides sp. 4_3_47FAA]
gi|263235249|gb|EEZ20773.1| outer membrane protein [Bacteroides sp. 3_1_33FAA]
gi|294449696|gb|EFG18220.1| OmpA family protein [Bacteroides vulgatus PC510]
gi|317387353|gb|EFV68226.1| OmpA family Outer membrane protein [Bacteroides sp. 3_1_40A]
Length = 243
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 55/144 (38%), Gaps = 12/144 (8%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW--L 76
+ + + + + V + + LQ + + F+T + ++ LS +
Sbjct: 83 AAEEAAQIQGAQVEQVTDNNGLQA-VKVTFDSGILFNTGNAALSAQAKSALSKFANNVLN 141
Query: 77 EKHDCDFLIEGHADEL--------GSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTS 127
+ D D I G+ D S ++ L RA +V +Y + G+S S++ V
Sbjct: 142 QNRDMDVSIYGYTDNQGWRNSTAEQSIQKNLNLSQERAQSVASYLLGCGVSNSQIKSVEG 201
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIV 151
G+ P + +NRR V
Sbjct: 202 LGQADPIGNNDTAEGRQQNRRVEV 225
>gi|88802157|ref|ZP_01117685.1| putative flagellar motor protein MotB [Polaribacter irgensii 23-P]
gi|88782815|gb|EAR13992.1| putative flagellar motor protein MotB [Polaribacter irgensii 23-P]
Length = 278
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 44/115 (38%), Gaps = 6/115 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADE----LGSRNSSIA 100
S+ D + F + SY++ VL + + + +IEGH D +
Sbjct: 149 ISISDKLLFKSGSYNVTDGAYVVLEKIAKVINDQPEMEVMIEGHTDSSPIKREIIQDNWD 208
Query: 101 LGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L RA A+ + + +R+ + + +P + +KNRR + +
Sbjct: 209 LSALRATAITRILQYKFGVQPNRLIAAARSQYVPLAPNDTAENKSKNRRTKIIIM 263
>gi|319793801|ref|YP_004155441.1| ompa/motb domain protein [Variovorax paradoxus EPS]
gi|315596264|gb|ADU37330.1| OmpA/MotB domain protein [Variovorax paradoxus EPS]
Length = 215
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 48/130 (36%), Gaps = 10/130 (7%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS----NLGSWLEKHDCDFLIE 86
+ + + SV F +S ++P Q+L L ++L+ + ++
Sbjct: 70 AGPLAAGRVTLDNGRIGISGSVLFALNSAELQPEGRQLLKSLAAPLAAYLQARNEMLMVS 129
Query: 87 GHADELG------SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
G D+ + L +RA V + GI +S + ++G E D
Sbjct: 130 GFTDDRQVRGGNKQFADNWELSAQRALTVTRALIEEGIPSSSVFAAAFGAEQAVASNADA 189
Query: 141 DAYAKNRRAI 150
D +KNRR
Sbjct: 190 DGRSKNRRVE 199
>gi|254228801|ref|ZP_04922224.1| OmpA family protein [Vibrio sp. Ex25]
gi|151938748|gb|EDN57583.1| OmpA family protein [Vibrio sp. Ex25]
Length = 281
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FD + + L+ L S++ + LI+GH D +GS +++++ RA V
Sbjct: 153 FDFGQKVLSRKQQETLAALNSYVSVDDRVTKILIDGHTDNVGSSLANLSVSRTRAEQVAE 212
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V GI S ++ ++G P + AKNRR + L
Sbjct: 213 ALVELGIDKSMIETRAHGSRYPIASNNSTKGQAKNRRVTLRL 254
>gi|70732179|ref|YP_261935.1| OmpA family outer membrane protein [Pseudomonas fluorescens Pf-5]
gi|68346478|gb|AAY94084.1| outer membrane protein, OmpA family [Pseudomonas fluorescens Pf-5]
Length = 304
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 40/74 (54%)
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++GH+D G+R ++ L RRA AV +F A G++ +++ V +G+ P +
Sbjct: 207 NHVELDGHSDNSGNRLTNRDLSRRRALAVMEFFKANGLAENQIVVRFHGERYPLAPNTNA 266
Query: 141 DAYAKNRRAIVFLK 154
AKNRR V L+
Sbjct: 267 ANRAKNRRVNVHLE 280
>gi|83944241|ref|ZP_00956696.1| OmpA domain protein [Sulfitobacter sp. EE-36]
gi|83844785|gb|EAP82667.1| OmpA domain protein [Sulfitobacter sp. EE-36]
Length = 317
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 51/137 (37%), Gaps = 6/137 (4%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVF----FDTSSYSIRPADIQVLSNLGSWLEK 78
DT+ +PD S + G V F T + ++ + LSNL + L+
Sbjct: 177 AEDTRTLAPDAPAQSQSEMAAALQNTGHVVLAALDFGTGTAALGQGEFDALSNLAAVLKD 236
Query: 79 HD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVY 136
++ GH D +G ++IAL RA AV + A R++ G P
Sbjct: 237 QPDLRIVLVGHTDSVGGLQNNIALSRSRAAAVRRRLITAHGIAGDRIEAQGMGYLSPIAS 296
Query: 137 GHDEDAYAKNRRAIVFL 153
+ NRR L
Sbjct: 297 NQTKAGRDANRRVEAVL 313
>gi|317009174|gb|ADU79754.1| flagellar motor protein MotB [Helicobacter pylori India7]
Length = 257
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/152 (15%), Positives = 51/152 (33%), Gaps = 7/152 (4%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS-SYSIRPADIQV 68
+++ + S I+ + + + ++ F+ + S +I +
Sbjct: 82 MASESSKPASQNTETKATIARKGEGSVLEQIDQGSILKLPSNLLFENATSDTINQDMMLY 141
Query: 69 LSNLGSWLEKHDCDFLIE--GHADELG----SRNSSIALGLRRAYAVFNYFVARGISASR 122
+ + ++K I G D S L RAY V + G++ ++
Sbjct: 142 IERIAKIIQKLPKRVHINVRGFTDNTPLAKTRFKSHYELAANRAYRVMKVLMQYGVNPNQ 201
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ +SYG P + KN R +F
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEIFFS 233
>gi|294676664|ref|YP_003577279.1| OmpA/MotB domain-containing protein [Rhodobacter capsulatus SB
1003]
gi|294475484|gb|ADE84872.1| OmpA/MotB domain protein [Rhodobacter capsulatus SB 1003]
Length = 185
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 40/105 (38%), Gaps = 4/105 (3%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
+ F T S + + L + + F+I GH D S ++ L RA
Sbjct: 82 LQTDTLFATDSTKLTASGRGYLQQFFTTAQA--RSFIITGHTDSRASDEYNMRLSKGRAE 139
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
AV A+ + A + V YG+ MP A+NRR V
Sbjct: 140 AVAGV--AQQVGAPVLAVNWYGERMPKATNATAAGMAQNRRVEVI 182
>gi|332292401|ref|YP_004431010.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332170487|gb|AEE19742.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 652
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 7/143 (4%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LE 77
S I + +T+ +FFD + IRP L+ + + +
Sbjct: 508 SSISSETVVPLDLETLSELIVEDGGLLKIKVGIIFFDLNKDYIRPDAAMELNKIVTLLSQ 567
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVY 136
+ + IE H D N ++ L RRA + NY + +GI+ R+ +G+
Sbjct: 568 QPSIEIRIESHTDARADDNYNMELSQRRAISTKNYLIRQGIAKERILSAQGFGETQLLND 627
Query: 137 GH-----DEDAYAKNRRAIVFLK 154
DE + NRR+ ++
Sbjct: 628 CSNGVQCDEVQHQINRRSEFIIE 650
>gi|149914118|ref|ZP_01902649.1| OmpA family protein [Roseobacter sp. AzwK-3b]
gi|149811637|gb|EDM71470.1| OmpA family protein [Roseobacter sp. AzwK-3b]
Length = 181
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 42/105 (40%), Gaps = 4/105 (3%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
+V +F T S + + Q L+N + + I GH D S ++ L LRRA
Sbjct: 77 TVNTDQYFATDSARLGHSARQNLAN--FFASTGAVSYTIVGHTDSRASDEYNMDLSLRRA 134
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
AV + AR A V G+ P + A NRR +
Sbjct: 135 NAVASV--ARSTGARIADVRGMGERAPKASNNTAAGMAANRRVEI 177
>gi|54293640|ref|YP_126055.1| hypothetical protein lpl0693 [Legionella pneumophila str. Lens]
gi|54296680|ref|YP_123049.1| hypothetical protein lpp0711 [Legionella pneumophila str. Paris]
gi|296106245|ref|YP_003617945.1| hypothetical protein lpa_01027 [Legionella pneumophila 2300/99
Alcoy]
gi|53750465|emb|CAH11859.1| hypothetical protein lpp0711 [Legionella pneumophila str. Paris]
gi|53753472|emb|CAH14927.1| hypothetical protein lpl0693 [Legionella pneumophila str. Lens]
gi|295648146|gb|ADG23993.1| hypothetical protein lpa_01027 [Legionella pneumophila 2300/99
Alcoy]
Length = 230
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 1/105 (0%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRA 106
+ +F SS + L+N+ L + + G D +GSR+ L +A
Sbjct: 108 IPTDKYFMFSSPRLNEICYPGLNNVIRLLNFYPQSTIYVAGFTDNVGSRSHKRKLSQAQA 167
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ + A GI+A R+K YG + A+NRR +
Sbjct: 168 ETMMTFLWANGIAAKRLKAEGYGDKNAISDNAIIHGSAQNRRIEI 212
>gi|260778838|ref|ZP_05887730.1| outer membrane protein [Vibrio coralliilyticus ATCC BAA-450]
gi|260605002|gb|EEX31297.1| outer membrane protein [Vibrio coralliilyticus ATCC BAA-450]
Length = 205
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 55/140 (39%), Gaps = 1/140 (0%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
++ D + SL+ + F SY + P +S + ++
Sbjct: 49 VVNARDLCPDTPIGAQIDNDGCSLEVTKEEERQLRILFANDSYDVSPVFSDQISAMADFM 108
Query: 77 -EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
I+G+A + G+ + ++ L +RA AV ++ GI+ R+ + +G
Sbjct: 109 DRYRSASIEIQGYASKTGNSDYNVELSKKRAVAVEELLLSYGINPERVTIVGFGATHLES 168
Query: 136 YGHDEDAYAKNRRAIVFLKG 155
G +E +A NRR + G
Sbjct: 169 TGEEETDHALNRRVTATVVG 188
>gi|190150781|ref|YP_001969306.1| outer membrane protein P5 precursor [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|307264101|ref|ZP_07545698.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|189915912|gb|ACE62164.1| outer membrane protein P5 precursor [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|306870579|gb|EFN02326.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
Length = 369
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 48/123 (39%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD S++PA L + + + G+ D +G S++ L
Sbjct: 243 AFSSDVLFDFGKSSLKPAAATALDAANTEIANLGLATPAIQVNGYTDRIGKEASNLKLSQ 302
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLK 154
RRA V NY V++G + + + YG+ P A +RR V ++
Sbjct: 303 RRAETVANYLVSKGQNPANVTAVGYGEANPVTGATCDKVKGRKALIACLAPDRRVEVQVQ 362
Query: 155 GCR 157
G +
Sbjct: 363 GAK 365
>gi|281423524|ref|ZP_06254437.1| OmpA family protein [Prevotella oris F0302]
gi|281402344|gb|EFB33175.1| OmpA family protein [Prevotella oris F0302]
Length = 683
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 48/137 (35%), Gaps = 28/137 (20%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGL 103
+ + D++F+D + ++RP L L + E + H D GS ++ L
Sbjct: 513 APVLIDNIFYDFNKATLRPESTAALDELVTLLNENPHVTIELAAHCDYRGSAEYNLRLSQ 572
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMP---------------------------SVY 136
+RA V Y +++GI+ R+ YGK+ P
Sbjct: 573 QRAENVVRYLISKGIATDRLTAVGYGKQRPKTIRKKLTEKYTWLKEGDQLTPAFIEKLDK 632
Query: 137 GHDEDAYAKNRRAIVFL 153
E NRR +
Sbjct: 633 EQQETCNQLNRRTEFSV 649
>gi|119471346|ref|ZP_01613818.1| hypothetical protein ATW7_16907 [Alteromonadales bacterium TW-7]
gi|119445622|gb|EAW26906.1| hypothetical protein ATW7_16907 [Alteromonadales bacterium TW-7]
Length = 1559
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 9/113 (7%)
Query: 48 VGDSVF---FDTSSYSIRPADIQVLSN-----LGSWLEKHDCDFLIEGHADELGSRNSSI 99
V D V F +S + + + + + + GH ++G+ + ++
Sbjct: 552 VKDVVIEGTFSLNSEQVTDDYRNTILQQSEAVIKALKQNESLKVTVAGHTCDIGNYDYNM 611
Query: 100 ALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
AL RRA AV + V + I +R++V G P + DE + A+NRR +
Sbjct: 612 ALSERRAEAVKHILVTQAGIDEARIEVLGLGYAQPLINNKDEASRAQNRRVHI 664
>gi|91978797|ref|YP_571456.1| hypothetical protein RPD_4338 [Rhodopseudomonas palustris BisB5]
gi|91685253|gb|ABE41555.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
Length = 341
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 46/117 (39%), Gaps = 11/117 (9%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIEGHADELGS---RN 96
VFFDT + P L L L + D ++GH D
Sbjct: 222 FQSEVFFDTGQALLLPEGRAELDKLAPALTELDKKIPPEIAWVLRVDGHTDRRPITGAFK 281
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA +V Y V+ G+ A R+ + + P + +DAY +NRR + L
Sbjct: 282 SNWELSSARAISVVQYLVSLGVPAQRLVAAGFAEFQPLDIANTDDAYKRNRRIELKL 338
>gi|148360690|ref|YP_001251897.1| OmpA family transporter outer membrane protein [Legionella
pneumophila str. Corby]
gi|148282463|gb|ABQ56551.1| outer membrane protein, OmpA family protein [Legionella pneumophila
str. Corby]
Length = 240
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 1/105 (0%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRA 106
+ +F SS + L+N+ L + + G D +GSR+ L +A
Sbjct: 118 IPTDKYFMFSSPRLNEICYPGLNNVIRLLNFYPQSTIYVAGFTDNVGSRSHKRKLSQAQA 177
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ + A GI+A R+K YG + A+NRR +
Sbjct: 178 ETMMTFLWANGIAAKRLKAEGYGDKNAISDNAIIHGSAQNRRIEI 222
>gi|296159971|ref|ZP_06842791.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
gi|295889717|gb|EFG69515.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
Length = 215
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 8/119 (6%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FD ++P + L +L S + + + ++ G+ D +GS + L LR
Sbjct: 94 ITYQADALFDFDKAILKPGGKEKLDDLASKIGALNLEVVVATGYTDRIGSDKYNDRLSLR 153
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY-------AKNRRAIVFLKGC 156
RA AV Y V++GI ++R+ GK P G ++ A +RR V + G
Sbjct: 154 RAQAVKAYLVSKGIESNRIYTEGKGKRNPVTTGCNQKNRKQLIACLAPDRRVEVEVVGT 212
>gi|187736002|ref|YP_001878114.1| OmpA/MotB domain protein [Akkermansia muciniphila ATCC BAA-835]
gi|187426054|gb|ACD05333.1| OmpA/MotB domain protein [Akkermansia muciniphila ATCC BAA-835]
Length = 478
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 8/112 (7%)
Query: 48 VGDSVFFDTSSYSIRPADI-QVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
+G + F+ + ++ + +L G ++ D F++EGH D GS + L L RA
Sbjct: 240 LGADLLFEYNKAVMKNSARLSMLQLAGLMMKNPDTIFIVEGHTDSFGSEEYNAVLSLMRA 299
Query: 107 YAVFNYFV------ARGISASRMKVTSYGKEMPSVY-GHDEDAYAKNRRAIV 151
AV + R R+ + + G P V D DA A NRR +
Sbjct: 300 NAVRQWLKDNGIALTRPNGECRLYIRACGSSRPVVSIRGDRDAQAANRRVEI 351
>gi|83943938|ref|ZP_00956395.1| OmpA family protein [Sulfitobacter sp. EE-36]
gi|83845185|gb|EAP83065.1| OmpA family protein [Sulfitobacter sp. EE-36]
Length = 234
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNS 97
L +F+S V +V F +S + A VL W+ + F + GH D +GS +
Sbjct: 75 DLANRFASEVESTVTFAFNSAQLDGAAQAVLRRQAGWIRQFPEVRFRVYGHTDAVGSNSY 134
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVT-SYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+ ALGLRRA +V + +GIS SR++ S+G+ P + + NRR + + G
Sbjct: 135 NKALGLRRAQSVVAFLSTQGISRSRLEAVVSFGETQPLIVTQGRE--RANRRTVTEVSG 191
>gi|327405327|ref|YP_004346165.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
16823]
gi|327320835|gb|AEA45327.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
Length = 752
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 42/114 (36%), Gaps = 10/114 (8%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
+ + FD + ++IRP + L + + + H D S+ ++ L RA A
Sbjct: 621 NPINFDLNKFTIRPDAAKELDKIVEVMNKYPYLVVELGAHTDCRASKAYNMKLSDNRAKA 680
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGH---------DEDAYAKNRRAIVFL 153
Y R + +R+ YG+ E+ + KNRR +
Sbjct: 681 SAEYIKKRITNPARIYGKGYGESRLLNGCECEGTVKSDCSEEEHQKNRRTEFKV 734
>gi|308186600|ref|YP_003930731.1| type VI secretion system, core protein [Pantoea vagans C9-1]
gi|308057110|gb|ADO09282.1| Putative type VI secretion system, core protein [Pantoea vagans
C9-1]
Length = 405
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/127 (14%), Positives = 36/127 (28%), Gaps = 4/127 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
L S + F I P +L+ + + ++ L+ D
Sbjct: 265 AAGQLEVSDGAFGSKVIIPADKLFAEQGTVINPVGRALLARVSTAMKDVKGTILVSVFTD 324
Query: 91 ELGSRNSS----IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ NS RA A+ + ++ G P + + +N
Sbjct: 325 DHPVDNSRFASSYEFSFARARAITQLLQLQLEDGHTVRSEGRGDSDPLLPNDSSENRTRN 384
Query: 147 RRAIVFL 153
RR + L
Sbjct: 385 RRVEITL 391
>gi|154493612|ref|ZP_02032932.1| hypothetical protein PARMER_02952 [Parabacteroides merdae ATCC
43184]
gi|154086822|gb|EDN85867.1| hypothetical protein PARMER_02952 [Parabacteroides merdae ATCC
43184]
Length = 662
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 67/180 (37%), Gaps = 33/180 (18%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG-----DSVFFDTSSYSIRPADIQ 67
+ M S G N + ++ + NE+ + + F S + +++F+D ++RP +
Sbjct: 481 VMMASARGYLNQNFELKTGPEEKNETYIVDFFLSPISKPVVIENIFYDFDKATLRPESKK 540
Query: 68 VLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT 126
L + + + + H D GS + L RRA +V +Y +A GI+ R++
Sbjct: 541 ALDEMIKILNDNPNVTIELGAHTDRKGSEQYNERLAQRRAQSVVDYLIAGGIAQDRLEAK 600
Query: 127 SYGKEMPSVYGH---------------DED------------AYAKNRRAIVFLKGCRAN 159
YG+ +P E+ A NRR + N
Sbjct: 601 GYGESVPKAINKRMAKNYDFLNEGDVLTEEFIERMTPEQQEIADQINRRTEFKVLRTNYN 660
>gi|83594657|ref|YP_428409.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170]
gi|9408182|emb|CAB99313.1| porin-assoziated protein (PAP) [Rhodospirillum rubrum]
gi|83577571|gb|ABC24122.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170]
Length = 273
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 47/118 (39%), Gaps = 1/118 (0%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNS 97
S G VFF S + P L + ++ G+AD G +
Sbjct: 156 GAPAPAVVSEGFKVFFALDSARLSPESEATLDRVSQAFLSGSPASVMVVGYADTSGPADY 215
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+I L RRA AV RGI++ + + +YG+E +V D +NRR V G
Sbjct: 216 NILLSQRRAEAVARGLAQRGIASEVLTLEAYGEERLAVPTADGVVEQQNRRVEVVFGG 273
>gi|315127225|ref|YP_004069228.1| component of sodium-driven polar flagellar motor [Pseudoalteromonas
sp. SM9913]
gi|315015739|gb|ADT69077.1| component of sodium-driven polar flagellar motor [Pseudoalteromonas
sp. SM9913]
Length = 292
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNSSIALGLRRAYAVFN 111
++++S + + Q L + +L+ I + D G R +++ L +RA + +
Sbjct: 188 YESNSSKLTKSSQQRLDKIAEYLKNDPSIESISIASYTDSYGGRWNNLDLSRKRAKEIKD 247
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
Y V G+ +++ +G++ + KNRR ++ +
Sbjct: 248 YMVGLGVDEAKVVTEGFGEKRFVDTNDNILGRDKNRRLVIQI 289
>gi|284989545|ref|YP_003408099.1| OmpA/MotB domain-containing protein [Geodermatophilus obscurus DSM
43160]
gi|284062790|gb|ADB73728.1| OmpA/MotB domain protein [Geodermatophilus obscurus DSM 43160]
Length = 313
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 44/111 (39%), Gaps = 5/111 (4%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG-----SRNSSIALG 102
V D V FD +RP Q+L + L +EGHA+ L S+ L
Sbjct: 167 VADQVLFDAEQAVLRPEGRQILDAIAPTLRGLPNSLGVEGHANHLPVTPGGIWPSNWELS 226
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA V Y G+ +RM Y P V D ++ + NRR V +
Sbjct: 227 AYRATTVVRYLTTGGVPGARMVANGYSDTRPLVPPTDPNSISVNRRVDVVV 277
>gi|157960903|ref|YP_001500937.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC
700345]
gi|157845903|gb|ABV86402.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345]
Length = 365
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/137 (21%), Positives = 58/137 (42%), Gaps = 2/137 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHD 80
D S+ N ++ ++ F T+S +++ + + L ++ + +
Sbjct: 222 DQCPNTPSTHKVDANGCTIYQEAEDKFDIEAKFATNSATVQESSYGDIKELAEYMSQHPN 281
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHD 139
+ I GHA G + ++AL RRA AV + G+++S++ YG P + G
Sbjct: 282 AEVTISGHASNTGKADYNMALSERRAAAVAEILINEYGVASSKVSSKGYGITQPLIEGSS 341
Query: 140 EDAYAKNRRAIVFLKGC 156
+A NRR + G
Sbjct: 342 AEANEANRRIEAHVTGT 358
>gi|330814653|ref|YP_004362828.1| OmpA/MotB domain protein [Burkholderia gladioli BSR3]
gi|327374645|gb|AEA65996.1| OmpA/MotB domain protein [Burkholderia gladioli BSR3]
Length = 421
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/154 (17%), Positives = 43/154 (27%), Gaps = 12/154 (7%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL- 72
+ + S ID L + + E + D+V +
Sbjct: 268 SAQASSPIDRLGAALGEQLRDEIAAGNVELIKDTAADTVTLRFNGMYASGDVTVAPWWAS 327
Query: 73 -------GSWLEKHDCDFLIEGHAD----ELGSRNSSIALGLRRAYAVFNYFVARGISAS 121
LI G+ D + S+ AL RA V F G+
Sbjct: 328 VMASVGRAIASSPATTHVLITGYTDNLPASPAHQGSNHALSTARAQQVAQIFAVAGVPKE 387
Query: 122 RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
R+ V P ++ A+NRR V +
Sbjct: 388 RISVVGQSDADPLADNVSKEGRARNRRVEVTVSN 421
>gi|213620924|ref|ZP_03373707.1| hypothetical protein SentesTyp_26862 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 67
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 23/53 (43%)
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L +RA V + G+ A R+ + G +P + AKNRR + +
Sbjct: 13 LSEKRAAEVAALLTSGGVPAGRVHIVGKGDTVPVADNGSKAGRAKNRRVEILV 65
>gi|208434727|ref|YP_002266393.1| flagellar motor rotation protein [Helicobacter pylori G27]
gi|208432656|gb|ACI27527.1| flagellar motor rotation protein [Helicobacter pylori G27]
Length = 257
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/152 (17%), Positives = 50/152 (32%), Gaps = 7/152 (4%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS-SYSIRPADIQV 68
+++ + S I+ + + + S+ F+ + S +I +
Sbjct: 82 MASESSKPASQNTETKATIARKGEGSVLEQIDQGSVLKLPSSLLFENATSDAINQDMMLY 141
Query: 69 LSNLGSWLEKHDCDFLIE--GHADELG----SRNSSIALGLRRAYAVFNYFVARGISASR 122
L + ++K I G D S L RAY V + G+ ++
Sbjct: 142 LERIAKIIQKLPKRVHINVRGFTDNTPLTKTRFKSHYELAANRAYRVMKVLIQYGVDPNQ 201
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ +SYG P + KN R +F
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEIFFS 233
>gi|149185390|ref|ZP_01863706.1| peptidoglycan-associated protein [Erythrobacter sp. SD-21]
gi|148830610|gb|EDL49045.1| peptidoglycan-associated protein [Erythrobacter sp. SD-21]
Length = 359
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 1/105 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
VFF+ I P +L N + ++ ++ GH D GS ++ L RR
Sbjct: 248 PYIVFFNWDESEITPEAATILDNAVSAYANCGMASVMLAGHTDTSGSAQYNMGLAERRNS 307
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+V +Y ARGI R+ ++G+ V D +NRR V
Sbjct: 308 SVRDYLSARGIPDGRISSEAFGENQLRVPTADGVRELQNRRVEVT 352
>gi|307609455|emb|CBW98949.1| hypothetical protein LPW_07341 [Legionella pneumophila 130b]
Length = 240
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 1/105 (0%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRA 106
+ +F SS + L+N+ L + + G D +GSR+ L +A
Sbjct: 118 IPTDKYFMFSSPRLNEICYPGLNNVIRLLNFYPQSTIYVAGFTDNVGSRSHKRKLSQAQA 177
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ + A GI+A R+K YG + A+NRR +
Sbjct: 178 ETMMTFLWANGIAAKRLKAEGYGDKNAISDNAIIHGSAQNRRIEI 222
>gi|134295071|ref|YP_001118806.1| OmpA/MotB domain-containing protein [Burkholderia vietnamiensis G4]
gi|134138228|gb|ABO53971.1| OmpA/MotB domain protein [Burkholderia vietnamiensis G4]
Length = 223
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 8/120 (6%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FD +++P Q L L S +E + + ++ G+ D +GS + L LR
Sbjct: 94 ITYQADALFDFDKATLKPLGKQKLDELASKIEGMNTEVVVATGYTDRIGSDKYNDRLSLR 153
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY-------AKNRRAIVFLKGCR 157
RA AV +Y V++GI A+++ GK P G ++ A +RR V + G +
Sbjct: 154 RAQAVKSYLVSKGIPANKIYTEGKGKRNPVTTGCNQKNRKQLIACLAPDRRVEVEVVGTQ 213
>gi|256839169|ref|ZP_05544679.1| outer membrane protein OmpA family protein [Parabacteroides sp.
D13]
gi|256740088|gb|EEU53412.1| outer membrane protein OmpA family protein [Parabacteroides sp.
D13]
Length = 658
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 53/140 (37%), Gaps = 28/140 (20%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
V D++F+D ++RP + L + + + + H D G+ + L RRA
Sbjct: 517 VIDNIFYDFDKATLRPESKKALDEMIKMLNDNPNVTIELGAHTDRKGTDQYNERLAQRRA 576
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGH---------------DED---------- 141
+V +Y +A GI A+R++ YG+ +P + E+
Sbjct: 577 QSVVDYLIAGGIEAARLEAKGYGESVPKMINKKMAKQFDFLKEGDVLTEEFILALPPEQQ 636
Query: 142 --AYAKNRRAIVFLKGCRAN 159
A NRR + N
Sbjct: 637 EIADQINRRTEFKVLRTNYN 656
>gi|238023262|ref|ZP_04603688.1| hypothetical protein GCWU000324_03189 [Kingella oralis ATCC 51147]
gi|237865645|gb|EEP66785.1| hypothetical protein GCWU000324_03189 [Kingella oralis ATCC 51147]
Length = 178
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 63/176 (35%), Gaps = 19/176 (10%)
Query: 1 MQYSTIFIILSAITMMSISGID-----NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFD 55
M+ + +F L+A D + ++P V + Q + + D++F
Sbjct: 1 MKKTFLFAALAACLSTPALAKDYIHKWCAPEEPAAPVMVAPAPAPQVERINLAADALFQF 60
Query: 56 TSSYSIR--PADIQVLSNLGSW---LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
S P L +L + + H + GH D LGS + LGL+RA V
Sbjct: 61 NRSSVKDLLPQGRATLDDLAARLVSRQAHIDSIALVGHTDRLGSEQYNYNLGLKRAETVK 120
Query: 111 NYFVARGISASRMKVTSYGKEMPS--------VYGHDEDAYAKNRRAIVFLKGCRA 158
Y +G+ + S G+ P + +RR +V + G +
Sbjct: 121 AYLQEKGVQDP-ISTRSAGETQPVTTDCHGTRATAALKACLQPDRRVVVEITGTTS 175
>gi|212633286|ref|YP_002309811.1| OmpA protein [Shewanella piezotolerans WP3]
gi|212554770|gb|ACJ27224.1| OmpA [Shewanella piezotolerans WP3]
Length = 201
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/182 (20%), Positives = 65/182 (35%), Gaps = 27/182 (14%)
Query: 1 MQYSTIFI---ILSAITMMSISGIDNLDTKISSPDT-------VLNESSLQEQFSSSVGD 50
M+ I + IL +M +D ++ + V E + + +++ +
Sbjct: 1 MRTLIILLSFAILGGCSMRDTVSMDTPTKQVHDLNDIDHDGVIVARERCTETELGATIDN 60
Query: 51 ---------------SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGS 94
+ F SY I P + + ++++K +IEGH + G+
Sbjct: 61 YGCGKIKPINERQELKILFANDSYYIDPVYYTQVEIIATFMQKFPNTQAVIEGHCSKTGT 120
Query: 95 RNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA AV R +SR+ Y + P H A+ NRR I L
Sbjct: 121 HEHNQELSQNRANAVSALLSERFDIESSRLSAVGYSFDRPIDPTHTAAAHKVNRRVIAEL 180
Query: 154 KG 155
G
Sbjct: 181 TG 182
>gi|42768700|gb|AAS45565.1| putative outer membrane protein [Aeromonas hydrophila]
Length = 344
Score = 59.0 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 58/146 (39%), Gaps = 16/146 (10%)
Query: 28 ISSPDTVLNESSLQEQFSS----SVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHD 80
+P V+ E+ ++ V F S++ + L+ L + D
Sbjct: 195 APAPAPVVEEAPAPAPQVVEKNFALNSDVLFAFGKDSLKSEGVAALNGLYQQIVEFQPKD 254
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS------ 134
+ ++ G+ D +GS + + L RA V N+ V++G++AS++ V G+ P
Sbjct: 255 GNAVVVGYTDRIGSDDYNQKLSEARARTVANFLVSKGMAASKVAVEGRGEANPVTGTKCN 314
Query: 135 ---VYGHDEDAYAKNRRAIVFLKGCR 157
A +RR V + G +
Sbjct: 315 GVKAKAQLISCLAPDRRVEVRVSGVQ 340
>gi|167035318|ref|YP_001670549.1| OmpA/MotB domain-containing protein [Pseudomonas putida GB-1]
gi|166861806|gb|ABZ00214.1| OmpA/MotB domain protein [Pseudomonas putida GB-1]
Length = 308
Score = 58.7 bits (140), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNSSIALGLRRAYA 108
V F + + L + +++ ++GH+D G+R ++ L RRA A
Sbjct: 176 QVGFPGGGTELDASARARLDVILDYMKADPTVNHIELDGHSDNSGNRLTNRDLSRRRALA 235
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V +YF A G++ ++ V +G++ P V + A+NRR + L
Sbjct: 236 VADYFKAHGVAEEQIIVRFHGEQYPLVKNNSAANRARNRRVNIEL 280
>gi|297538334|ref|YP_003674103.1| OmpA/MotB domain-containing protein [Methylotenera sp. 301]
gi|297257681|gb|ADI29526.1| OmpA/MotB domain protein [Methylotenera sp. 301]
Length = 377
Score = 58.7 bits (140), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 46/114 (40%), Gaps = 8/114 (7%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH--DCDFLIEGHADELGSRNSSIALGL 103
++ F ++ +L + + L++H ++ G+ D +GS + L
Sbjct: 249 VTISAEKLFGFDKSKLQDGAKPILDGVVAKLKEHSEFKLVMVTGYTDRIGSEAYNQKLSE 308
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY------AKNRRAIV 151
RA V +Y V++GI A R++ G+ V A NRR ++
Sbjct: 309 HRANEVKDYIVSQGIDAGRLQAVGKGESEAVVDCKGIKGKKLISCLAPNRRVVI 362
>gi|269968606|ref|ZP_06182608.1| hypothetical protein VMC_40380 [Vibrio alginolyticus 40B]
gi|269826817|gb|EEZ81149.1| hypothetical protein VMC_40380 [Vibrio alginolyticus 40B]
Length = 288
Score = 58.7 bits (140), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 52/141 (36%), Gaps = 1/141 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
T + + ++ ++ + + F S I P + L+ L H
Sbjct: 134 SQTTCTPPDDIEALRSDLNIVSDIYALLNIDNQFAVDSAEINPKYMGHLAEAAYILRDHP 193
Query: 81 -CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
++ GHAD G+ + + L RA V Y GI++ R+ S G +P G
Sbjct: 194 NLSLVVTGHADATGTPDYNQKLAQARAEQVKRYLTVFGITSERVTTKSVGDNLPLYEGET 253
Query: 140 EDAYAKNRRAIVFLKGCRANT 160
NRR + + +++
Sbjct: 254 PAVRLTNRRVSIEVISPNSDS 274
>gi|319955585|ref|YP_004166852.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
gi|319424245|gb|ADV51354.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
Length = 275
Score = 58.7 bits (140), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 54/137 (39%), Gaps = 6/137 (4%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD 82
NL I+ + +N + + ++ D + F++ SY++ +L + +
Sbjct: 123 NLKKSIADDEDDVNINIDKTVVMINISDKLLFNSGSYTVSNKANNILKKIADVINSEPSM 182
Query: 83 -FLIEGHADEL----GSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVY 136
++EGH D + L ++RA +V + ++ + +P V
Sbjct: 183 EVMVEGHTDSRTIQTPMFQDNWDLSVKRATSVVRILQKKYNVAPEKLIASGRSSFLPLVE 242
Query: 137 GHDEDAYAKNRRAIVFL 153
++ +KNRR + +
Sbjct: 243 NDSKENRSKNRRTRIVI 259
>gi|196231290|ref|ZP_03130149.1| OmpA/MotB domain protein [Chthoniobacter flavus Ellin428]
gi|196224626|gb|EDY19137.1| OmpA/MotB domain protein [Chthoniobacter flavus Ellin428]
Length = 316
Score = 58.7 bits (140), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 43/107 (40%), Gaps = 5/107 (4%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
F+ + P IQ L L + F+I GH D G+ ++ L +RA +V +
Sbjct: 206 LFEWGKAELLPQAIQNLQKLAQLIRLNPKATFIISGHTDHTGTHEGNLILSQQRADSVRD 265
Query: 112 YFVAR-GISASRMKVTSYG--KEMP-SVYGHDEDAYAKNRRAIVFLK 154
+ VA GI R+ + P + A NRR + +K
Sbjct: 266 WLVANLGIDPMRITTVGKADDEAFPNLGPDKSIEEQAPNRRVEIVIK 312
>gi|91216576|ref|ZP_01253542.1| OmpA family protein [Psychroflexus torquis ATCC 700755]
gi|91185370|gb|EAS71747.1| OmpA family protein [Psychroflexus torquis ATCC 700755]
Length = 759
Score = 58.7 bits (140), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 44/110 (40%), Gaps = 7/110 (6%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAV 109
+++FD + IRP L + ++ + + H D + L +RA A
Sbjct: 544 TIYFDLDKFQIRPDAEVELQKIIVAMKSYPNLRIDVRSHTDSRAGDEYNQILSNKRAKAT 603
Query: 110 FNYFVARG-ISASRMKVTSYGKEMPSVYGHD-----EDAYAKNRRAIVFL 153
NY + + IS+ R+ YG+ + E +A NRRA +
Sbjct: 604 INYIIEKSGISSERISGRGYGESQLVNKCSNGIDCSESEHALNRRAEFII 653
>gi|50956547|gb|AAT90794.1| conserved hypothetical protein [uncultured proteobacterium QS1]
Length = 511
Score = 58.7 bits (140), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 36/126 (28%), Gaps = 9/126 (7%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQ--VLSNLGSWLEKHDCDFLIEGHADEL 92
L + + F T + + + LG L D + GH D
Sbjct: 361 LEVRADPRGWLLIFTSDGAFATGQARLSEEFKKKRNIERLGEALAPWPGDLEVIGHTDNK 420
Query: 93 GSRNSSI----ALGLRRAYAVFNYFVARGISASR---MKVTSYGKEMPSVYGHDEDAYAK 145
RNS L RA V + S+ + G P E ++
Sbjct: 421 PYRNSPSNSNLKLSEGRAQTVADKMRESMQSSKYQRSVTSVGKGDTEPLDTNDTEQGRSR 480
Query: 146 NRRAIV 151
NRR +
Sbjct: 481 NRRVDI 486
>gi|304397573|ref|ZP_07379450.1| type IV / VI secretion system protein, DotU family [Pantoea sp. aB]
gi|304354745|gb|EFM19115.1| type IV / VI secretion system protein, DotU family [Pantoea sp. aB]
Length = 405
Score = 58.7 bits (140), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/127 (14%), Positives = 35/127 (27%), Gaps = 4/127 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
L S + F I P +L+ + + ++ L+ D
Sbjct: 265 AAGQLEVSDGAFGSKVIIPADKLFAEQGTVINPVGRALLARVSNAMKDVKGTILVSVFTD 324
Query: 91 ELGSRNSS----IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ NS RA + + ++ G P + + +N
Sbjct: 325 DHPVDNSRFASSYEFSFARARTITQLLQVQLNDGHTVRSEGRGDSDPLLPNDSSENRTRN 384
Query: 147 RRAIVFL 153
RR + L
Sbjct: 385 RRVEITL 391
>gi|225011622|ref|ZP_03702060.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A]
gi|225004125|gb|EEG42097.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-2A]
Length = 468
Score = 58.7 bits (140), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 37/78 (47%)
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
E + LIEG+A GS +I L ++RA AV ++ GI+ R++V G P
Sbjct: 387 ENPVGNLLIEGYASADGSEEYNIELSVKRAEAVRDFLNKIGINIERLEVRGLGVNSPVGN 446
Query: 137 GHDEDAYAKNRRAIVFLK 154
+ A+NRR K
Sbjct: 447 NESPEGRAENRRVQFIYK 464
>gi|305664380|ref|YP_003860667.1| OmpA family protein [Maribacter sp. HTCC2170]
gi|88708397|gb|EAR00633.1| OmpA family protein [Maribacter sp. HTCC2170]
Length = 646
Score = 58.7 bits (140), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 45/109 (41%), Gaps = 6/109 (5%)
Query: 51 SVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
+++FD Y+IR + + + + + H D G ++ L +RA +
Sbjct: 536 TIYFDFDKYNIRSDSEIEIQKVIAAMEKYPSLKIKVNSHTDSRGRDAYNLWLSQKRAEST 595
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDED-----AYAKNRRAIVFL 153
NY +++GI SR+ +G+ + + KNRR+ +
Sbjct: 596 VNYMISKGILESRLLGEGFGETKLINKCANGVRCFGIEHEKNRRSEFII 644
>gi|124002443|ref|ZP_01687296.1| OmpA family protein [Microscilla marina ATCC 23134]
gi|123992272|gb|EAY31640.1| OmpA family protein [Microscilla marina ATCC 23134]
Length = 756
Score = 58.7 bits (140), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 53 FFDTSSYSIRPADIQVL-SNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FF+ + Y ++ I+ L + + + + I GH D++G+ + + L RRA A+
Sbjct: 652 FFEYNKYELKDKFIKNLEPFIKYLQKNKNAELAIYGHTDQVGTAAACLLLSQRRANAIKQ 711
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK-NRRAIVFL 153
YFV G++A R+ YGK P D AK NRR + L
Sbjct: 712 YFVRHGVAAKRITAKGYGKAKPIWKNEKHDWQAKENRRIELLL 754
>gi|86132280|ref|ZP_01050875.1| OmpA family protein [Dokdonia donghaensis MED134]
gi|85817199|gb|EAQ38382.1| OmpA family protein [Dokdonia donghaensis MED134]
Length = 287
Score = 58.7 bits (140), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/145 (20%), Positives = 59/145 (40%), Gaps = 7/145 (4%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+++ + I+ D +N S+ D V F + SY I ++L +
Sbjct: 121 VTLALVTSLKREVGINDQDIEINVEKGV--VFISLSDKVLFKSGSYQITSRAEEILGKVA 178
Query: 74 SWLE-KHDCDFLIEGHADELGSRN----SSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
+ + K D + L+EGH D + + L +RA A+ V G + +++
Sbjct: 179 TVINSKPDFEALVEGHTDNVPYNRGVLIDNWDLSAKRATAIVRKLVELGANPAQLIAAGR 238
Query: 129 GKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +P V + + NRR +++
Sbjct: 239 SEFVPLVPNDTPENKSTNRRTKIYV 263
>gi|83949579|ref|ZP_00958312.1| OmpA family protein [Roseovarius nubinhibens ISM]
gi|83837478|gb|EAP76774.1| OmpA family protein [Roseovarius nubinhibens ISM]
Length = 171
Score = 58.7 bits (140), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/101 (25%), Positives = 41/101 (40%), Gaps = 6/101 (5%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F T S +I P+ L + + + ++I GH D S ++ L LRRA +V
Sbjct: 73 LFATDSANISPSGRARLQQ--FFRDANAVSYIITGHTDSRASDAYNMNLSLRRANSVARV 130
Query: 113 FVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ +R+ V YG+ MP NRR +
Sbjct: 131 ---AVQTGARIADVRGYGERMPKASNATAAGMQANRRVEII 168
>gi|332300857|ref|YP_004442778.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707]
gi|332177920|gb|AEE13610.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707]
Length = 665
Score = 58.7 bits (140), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 51/132 (38%), Gaps = 28/132 (21%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
+++D S+RP + L L + + D + H D GS+ + L RRA +
Sbjct: 532 HDIYYDFDRASLRPEGKKSLDYLITLLEQNPDVRLELSSHTDRKGSQAYNQKLSQRRAQS 591
Query: 109 VFNYFVARGISASRMKVTSYGKEMPS-----------------------VYGHDED---- 141
V +Y +A+GI+A R++ YGKE P V E+
Sbjct: 592 VVDYLIAKGIAADRLEARGYGKERPYVVTKGMAARFDWLPEGQELTAEWVDTLTEEQQIV 651
Query: 142 AYAKNRRAIVFL 153
NRR +
Sbjct: 652 CDQLNRRTEFTV 663
>gi|315122505|ref|YP_004062994.1| OmpA/MotB [Candidatus Liberibacter solanacearum CLso-ZC1]
gi|313495907|gb|ADR52506.1| OmpA/MotB [Candidatus Liberibacter solanacearum CLso-ZC1]
Length = 190
Score = 58.7 bits (140), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 49/114 (42%), Gaps = 3/114 (2%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIA 100
+Q + + + F + S + + VL+++ + + I GH D +G+ ++
Sbjct: 71 DQITCHIPVHIAFSSGS-ILHKDIVPVLNSIATTLNKFPSTKIAITGHTDSIGTLEYNLL 129
Query: 101 LGLRRAYAVFNYFVARGISASRMKV-TSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +R+ + +Y + +G+S R + + P ++ N+R + +
Sbjct: 130 ISQQRSQIITDYLIEKGVSPDRFAPPQGFAYKRPIDTNDTQEGRKNNQRVEINI 183
>gi|298488736|ref|ZP_07006765.1| Outer membrane protein, OmpA family [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298156809|gb|EFH97900.1| Outer membrane protein, OmpA family [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 301
Score = 58.7 bits (140), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 42/74 (56%)
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++GH+D G+R ++ L RRA AV +YF A+GI ++ + +G+ P V +E
Sbjct: 207 NRIELDGHSDNSGNRLTNRDLSRRRALAVMDYFKAQGIPEQQITLRFHGERYPLVPNTNE 266
Query: 141 DAYAKNRRAIVFLK 154
A+NRR V L+
Sbjct: 267 ANRARNRRVNVHLE 280
>gi|189423681|ref|YP_001950858.1| serine/threonine protein kinase [Geobacter lovleyi SZ]
gi|189419940|gb|ACD94338.1| serine/threonine protein kinase [Geobacter lovleyi SZ]
Length = 734
Score = 58.7 bits (140), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/87 (21%), Positives = 32/87 (36%), Gaps = 2/87 (2%)
Query: 67 QVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT 126
L S E L+ D +SS+AL +R V +RGI +
Sbjct: 647 DRLVRALSTKELQGRQLLLFSFTDASSDPHSSLALSHQRVGQVAQELRSRGIMVA--AAE 704
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+G +P ++ +N R ++L
Sbjct: 705 GFGSSLPVADNSTKEGRQRNNRVEIWL 731
>gi|320156464|ref|YP_004188843.1| outer membrane protein SypB [Vibrio vulnificus MO6-24/O]
gi|319931776|gb|ADV86640.1| outer membrane protein SypB [Vibrio vulnificus MO6-24/O]
Length = 280
Score = 58.7 bits (140), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 52/134 (38%), Gaps = 2/134 (1%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIE 86
D + + + + F +S I P + L+ + L +H +
Sbjct: 138 PRDEDAFRFQLDIVNELYDILNIDNQFAVNSAEINPKYMGHLAKAANILREHTALTLTVT 197
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
GHAD G+ + L + RA V Y G+ +R+ S G+++P G N
Sbjct: 198 GHADATGNEAYNEKLAMDRAEQVKRYLAIFGLDPNRITTYSLGEKLPLFDGESAAVRLTN 257
Query: 147 RRAIVFLKGCRANT 160
RR + ++ ANT
Sbjct: 258 RRVSIEIQ-SPANT 270
>gi|317178824|dbj|BAJ56612.1| flagellar motor protein MotB [Helicobacter pylori F30]
Length = 255
Score = 58.7 bits (140), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/152 (15%), Positives = 51/152 (33%), Gaps = 7/152 (4%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS-SYSIRPADIQV 68
+++ + S I+ + + + ++ F+ + S +I +
Sbjct: 82 MASESSKPASQNTETKATIARKGEGSVLEQIDQGSILKLPSNLLFENATSDTINQDMMLY 141
Query: 69 LSNLGSWLEKHDCDFLIEGHA---DELGS---RNSSIALGLRRAYAVFNYFVARGISASR 122
+ + ++K I D + S L RAY V + G++ ++
Sbjct: 142 IERIAKIIQKLPKRVHINVRGFTDDMPLTKTRFKSHYELAANRAYRVMKVLIQYGVNPNQ 201
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ +SYG P + KN R +F
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEIFFS 233
>gi|298374715|ref|ZP_06984673.1| OmpA family protein [Bacteroides sp. 3_1_19]
gi|298269083|gb|EFI10738.1| OmpA family protein [Bacteroides sp. 3_1_19]
Length = 658
Score = 58.7 bits (140), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 52/140 (37%), Gaps = 28/140 (20%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
V D++F+D ++RP + L + + + + H D G+ + L RRA
Sbjct: 517 VIDNIFYDFDKATLRPESKKALDEMIKMLNDNPNVTIELGAHTDRKGTDQYNERLAQRRA 576
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGH---------------DED---------- 141
+V +Y +A GI A+R++ YG+ +P E+
Sbjct: 577 QSVVDYLIAGGIEAARLEAKGYGESVPKTINKKMAKQFDFLKEGDVLTEEFILALPPEQQ 636
Query: 142 --AYAKNRRAIVFLKGCRAN 159
A NRR + N
Sbjct: 637 EIADQINRRTEFKVLRTNYN 656
>gi|296534564|ref|ZP_06896978.1| outer membrane protein MopB [Roseomonas cervicalis ATCC 49957]
gi|296265104|gb|EFH11315.1| outer membrane protein MopB [Roseomonas cervicalis ATCC 49957]
Length = 97
Score = 58.7 bits (140), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 35/78 (44%)
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ GHAD GS + L RRA AV V G++ S + V ++G+ P V
Sbjct: 20 RVQTTRIEVAGHADRAGSPQYNQRLSQRRADAVAAELVRLGVARSAISVQAFGESRPLVP 79
Query: 137 GHDEDAYAKNRRAIVFLK 154
D +NRR + L+
Sbjct: 80 TADGVREPQNRRVEIVLR 97
>gi|27365951|ref|NP_761479.1| outer membrane protein [Vibrio vulnificus CMCP6]
gi|27362100|gb|AAO11006.1| Outer membrane protein [Vibrio vulnificus CMCP6]
Length = 280
Score = 58.7 bits (140), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 52/134 (38%), Gaps = 2/134 (1%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIE 86
D + + + + F +S I P + L+ + L +H +
Sbjct: 138 PRDEDAFRFQLDIVNELYDILNIDNQFAVNSAEINPKYMGHLAKAANILREHTALTLTVT 197
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
GHAD G+ + L + RA V Y G+ +R+ S G+++P G N
Sbjct: 198 GHADATGNEAYNEKLAMDRAEQVKRYLAIFGLDPNRITTYSLGEKLPLFDGESAAVRLTN 257
Query: 147 RRAIVFLKGCRANT 160
RR + ++ ANT
Sbjct: 258 RRVSIEIQ-SPANT 270
>gi|37679816|ref|NP_934425.1| outer membrane protein [Vibrio vulnificus YJ016]
gi|37198561|dbj|BAC94396.1| outer membrane protein [Vibrio vulnificus YJ016]
Length = 348
Score = 58.7 bits (140), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 52/134 (38%), Gaps = 2/134 (1%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIE 86
D + + + + F +S I P + L+ + L +H +
Sbjct: 206 PRDEDAFRFQLDIVNELYDILNIDNQFAVNSAEINPKYMGHLAKAANILREHTALTLTVT 265
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
GHAD G+ + L + RA V Y G+ +R+ S G+++P G N
Sbjct: 266 GHADATGNEAYNEKLAMDRAEQVKRYLAIFGLDPNRITTYSLGEKLPLFDGESAAVRLTN 325
Query: 147 RRAIVFLKGCRANT 160
RR + ++ ANT
Sbjct: 326 RRVSIEIQ-SPANT 338
>gi|312796631|ref|YP_004029553.1| Chemotaxis motB protein [Burkholderia rhizoxinica HKI 454]
gi|312168406|emb|CBW75409.1| Chemotaxis motB protein [Burkholderia rhizoxinica HKI 454]
Length = 216
Score = 58.7 bits (140), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 49/116 (42%), Gaps = 10/116 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC----DFLIEGHADELG------SR 95
+ SV F +S ++P ++L +L L + ++ G AD+
Sbjct: 85 IGISGSVLFALNSDQLQPEGRELLKSLAKPLRSYLSARDEILMVSGFADDQQVRAGNRRF 144
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ L +RA V F++ G+ AS + ++G E P D+ A+NRR +
Sbjct: 145 ADNWELSAQRALTVTRAFISEGVPASSVFAAAFGSEQPVSSNADDAGRARNRRVEI 200
>gi|71733309|ref|YP_276024.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|257486625|ref|ZP_05640666.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae
pv. tabaci ATCC 11528]
gi|289624957|ref|ZP_06457911.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae
pv. aesculi str. NCPPB3681]
gi|289650466|ref|ZP_06481809.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae
pv. aesculi str. 2250]
gi|71553862|gb|AAZ33073.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae
pv. phaseolicola 1448A]
gi|320325629|gb|EFW81691.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae
pv. glycinea str. B076]
gi|320327087|gb|EFW83101.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae
pv. glycinea str. race 4]
gi|330867247|gb|EGH01956.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv.
aesculi str. 0893_23]
gi|330879063|gb|EGH13212.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330889567|gb|EGH22228.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv. mori
str. 301020]
gi|330989530|gb|EGH87633.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331010107|gb|EGH90163.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 301
Score = 58.7 bits (140), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 42/74 (56%)
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++GH+D G+R ++ L RRA AV +YF A+GI ++ + +G+ P V +E
Sbjct: 207 NRIELDGHSDNSGNRLTNRDLSRRRALAVMDYFKAQGIPEQQITLRFHGERYPLVPNTNE 266
Query: 141 DAYAKNRRAIVFLK 154
A+NRR V L+
Sbjct: 267 ANRARNRRVNVHLE 280
>gi|330991015|ref|ZP_08314969.1| hypothetical protein SXCC_00923 [Gluconacetobacter sp. SXCC-1]
gi|329761836|gb|EGG78326.1| hypothetical protein SXCC_00923 [Gluconacetobacter sp. SXCC-1]
Length = 320
Score = 58.7 bits (140), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 40/117 (34%), Gaps = 11/117 (9%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIEGHADELGSR---N 96
V F + P +Q + L L + ++GHAD
Sbjct: 201 FQSEVLFPPGGADLSPEGVQEIRVLAKTLRQVAQQIPADVPWILRVDGHADRQPIHSAFP 260
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA V +A GI + T + P G +A+A+NRR L
Sbjct: 261 SNWELSSARAITVVKLLIAEGIDPHHLAATGFSDYQPLDKGTTPEAFARNRRIEFRL 317
>gi|293390286|ref|ZP_06634620.1| OmpA-like outer membrane protein [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|290950820|gb|EFE00939.1| OmpA-like outer membrane protein [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 346
Score = 58.7 bits (140), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 53/138 (38%), Gaps = 10/138 (7%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGH 88
+ + + S+ V F +++P L + + + ++ + + G+
Sbjct: 209 GQGVAPAPAPEVVRKTFSLNSDVTFAFGKANLKPQAQNTLDGIYGEIAQVNNANVQVAGY 268
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY--- 143
D +GS + L RRA V NY V++G+S + T +GK P
Sbjct: 269 TDRIGSDAYNQKLSQRRAETVANYLVSKGVSQQAISATGHGKANPVTGSKCDAVKGRKAL 328
Query: 144 ----AKNRRAIVFLKGCR 157
A +RR + + G +
Sbjct: 329 IACLADDRRVEIAVNGTK 346
>gi|255264472|ref|ZP_05343814.1| OmpA/MotB domain protein [Thalassiobium sp. R2A62]
gi|255106807|gb|EET49481.1| OmpA/MotB domain protein [Thalassiobium sp. R2A62]
Length = 227
Score = 58.7 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 43/181 (23%), Positives = 75/181 (41%), Gaps = 30/181 (16%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKIS------------------------SPDTVLN 36
M++ + + +AI +++ SG D S +
Sbjct: 7 MKF--VLLSATAIALIACSGGDRRAAAASVGREAGSFIDNGDFGNSTMNNTLIQSGQRVY 64
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSR 95
+L +F+ V SV F +S ++ VL W+ + F + GH D +G
Sbjct: 65 TINLGRRFTQEVSPSVTFPFNSNALDENARAVLRQQADWIRQFPEVRFKVYGHTDLVGGT 124
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVT-SYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ LGLRRA AV Y ++GIS SR++ S+G+ P + + ++ NRR + +
Sbjct: 125 AYNRQLGLRRAQAVVIYLTSQGISRSRLEAVASFGETRPVIQTNGQERR--NRRTVTEVS 182
Query: 155 G 155
G
Sbjct: 183 G 183
>gi|292491797|ref|YP_003527236.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4]
gi|291580392|gb|ADE14849.1| OmpA/MotB domain protein [Nitrosococcus halophilus Nc4]
Length = 202
Score = 58.7 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 52/134 (38%), Gaps = 6/134 (4%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG---SWLEK 78
++ + + +++ S + + F +S+ I L +G + +
Sbjct: 63 KTRSLVMTPAPSATPQPVEEKKKSVGIALPIQFALNSFEILDETRPYLDEVGRLLNMEQF 122
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYG 137
+ +IEGH D GS N + L RA +V NY V+ R+ V G+ P
Sbjct: 123 KEERIIIEGHTDAQGSENYNNWLSQERAKSVKNYLVSSFRVDPERLMVVGRGEREPLPDL 182
Query: 138 HDEDAYAKNRRAIV 151
+ + NRR +
Sbjct: 183 NPNNG--LNRRVEL 194
>gi|187924986|ref|YP_001896628.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
gi|187716180|gb|ACD17404.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
Length = 215
Score = 58.7 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 8/119 (6%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FD ++PA + L +L S + + + ++ G+ D +GS + L LR
Sbjct: 94 ITYQADALFDFDKAILKPAGKEKLDDLASKIGALNLEVVVATGYTDRIGSDKYNDRLSLR 153
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY-------AKNRRAIVFLKGC 156
RA AV Y V++GI ++R+ GK P G ++ A +RR V + G
Sbjct: 154 RAQAVKAYLVSKGIESNRIYTEGKGKRNPVTTGCNQKNRKQLIACLAPDRRVEVEVVGT 212
>gi|90408529|ref|ZP_01216686.1| peptidoglycan-associated lipoprotein [Psychromonas sp. CNPT3]
gi|90310348|gb|EAS38476.1| peptidoglycan-associated lipoprotein [Psychromonas sp. CNPT3]
Length = 176
Score = 58.7 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 65/158 (41%), Gaps = 19/158 (12%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---------- 50
M ++ I L + + + S D + ++ + + E +
Sbjct: 5 MISKSLLIALPMLALGACSSSSESDATSNETNSAVVSAETVETAVVDAMNLTDEEKLAKA 64
Query: 51 --------SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIAL 101
++ FD + ++ ++L +L H IEG+ DE G+ +IAL
Sbjct: 65 YSYAILETTIQFDYDTSVLKARYTKILDAHAKFLVDHPTKLLTIEGNTDERGTPEYNIAL 124
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
G RRA +V Y G+++ ++ + SYG+E P GHD
Sbjct: 125 GERRAMSVSTYLENMGVTSKQISIVSYGEEKPVNLGHD 162
>gi|58584412|ref|YP_197985.1| Outer membrane protein, pal-like [Wolbachia endosymbiont strain TRS
of Brugia malayi]
gi|58418728|gb|AAW70743.1| Outer membrane protein, pal-like [Wolbachia endosymbiont strain TRS
of Brugia malayi]
Length = 159
Score = 58.7 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/159 (24%), Positives = 63/159 (39%), Gaps = 14/159 (8%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQ 67
++ + ++G+ + + + +N VFFD I A
Sbjct: 5 LVAMCCFCLLLTGVSSCSKRGVNAINKMNFV-----VKQMKEKRVFFDYDKSDISEAGAD 59
Query: 68 VLSNLGSWLEK-HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKV 125
L ++ L+ + + GH D GS ++ALG RRA A N+ V+ +R+K
Sbjct: 60 TLLDVMEVLQDDPNVKVTLIGHTDNRGSYEYNVALGARRADAAKNFMVSCTPYLENRIKT 119
Query: 126 TSYGKEMPSVYGHD-------EDAYAKNRRAIVFLKGCR 157
S G+ P VY D E +AKNRR G +
Sbjct: 120 ASKGETEPLVYVADDSKNSKYEKEHAKNRRVEFSFSGMK 158
>gi|317177353|dbj|BAJ55142.1| flagellar motor protein MotB [Helicobacter pylori F16]
Length = 255
Score = 58.7 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 7/152 (4%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS-SYSIRPADIQV 68
+++ + S I+ + + + ++ F+ + S SI +
Sbjct: 82 MASESSKPASQNTETKATIARKGEGSVLEQIDQGSILKLPSNLLFENATSDSINQDMMLY 141
Query: 69 LSNLGSWLEKHDCDFLIE--GHADELG----SRNSSIALGLRRAYAVFNYFVARGISASR 122
+ + ++K I G D+ S L RAY V + G++ ++
Sbjct: 142 IERIAKIIQKLPKRVHINVRGFTDDTPLIKTRFKSHYELAANRAYRVMKVLMQYGVNPNQ 201
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ +SYG P + KN R +F
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEIFFS 233
>gi|167626141|ref|YP_001676435.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis
HAW-EB4]
gi|167356163|gb|ABZ78776.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4]
Length = 304
Score = 58.7 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 2/111 (1%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHD--CDFLIEGHADELGSRNSSIALGLRRAYAV 109
+ F SS + + Q L + +L+ + L++GHAD G +++ L RA V
Sbjct: 181 LLFAPSSSLLNNSHEQDLYAVYRYLQADSSIVEILVDGHADASGDHLANLVLSKERADEV 240
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
+ + G+SA ++ +G P ++ + NRR + L AN+
Sbjct: 241 VSRLIELGVSAKMIQTRHHGTRAPVASNNNTEGRELNRRVTLRLVKSAANS 291
>gi|311745704|ref|ZP_07719489.1| putative OmpA family protein [Algoriphagus sp. PR1]
gi|126575146|gb|EAZ79496.1| putative OmpA family protein [Algoriphagus sp. PR1]
Length = 430
Score = 58.7 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 5/126 (3%)
Query: 33 TVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGH 88
+ + F ++ + +V++ S + ++ + I+G+
Sbjct: 306 PIKETVQQVDYFKEAINEGYVNVYYAFDSSKPLAYSASAADYVANFLKKNPGVSVEIKGY 365
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
ADELGS + +I L +RA AV++ +A GI ASR+ YG++ DA RR
Sbjct: 366 ADELGSEDYNIQLSEKRAKAVYDLLIATGIDASRLSFKGYGEDTSVDK-SSADARQMARR 424
Query: 149 AIVFLK 154
+K
Sbjct: 425 VSFEVK 430
>gi|113970538|ref|YP_734331.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-4]
gi|113885222|gb|ABI39274.1| OmpA/MotB domain protein [Shewanella sp. MR-4]
Length = 264
Score = 58.7 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 67/152 (44%), Gaps = 3/152 (1%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQF--SSSVGDSVFFDTSSYSIRPADIQ 67
L++++ + S+ + + Q+Q ++G +V F T S + +
Sbjct: 105 LASLSSKQQASEQRAAEYASTQKQLDELLAEQQQLLSELALGMNVQFRTGSSELESHFLP 164
Query: 68 VLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT 126
L N+ +++ + + ++G+AD G + AL +R V Y + +G++ R+
Sbjct: 165 QLDNVAKVMKRSSESNLELKGYADRRGDLAYNQALSEQRLLEVRGYLIKQGVAPERITTQ 224
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
++G MP D ++ +RR + ++ +
Sbjct: 225 AFGARMPLNDQQDSESDVFDRRVTLTMQPNQG 256
>gi|301308400|ref|ZP_07214354.1| OmpA family protein [Bacteroides sp. 20_3]
gi|300833870|gb|EFK64486.1| OmpA family protein [Bacteroides sp. 20_3]
Length = 658
Score = 58.7 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 52/140 (37%), Gaps = 28/140 (20%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
V D++F+D ++RP + L + + + + H D G+ + L RRA
Sbjct: 517 VIDNIFYDFDKATLRPESKKALDEMIKMLNDNPNVTIELGAHTDRKGTDQYNERLAQRRA 576
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGH---------------DED---------- 141
+V +Y +A GI A+R++ YG+ +P E+
Sbjct: 577 QSVVDYLIAGGIEAARLEAKGYGESVPKTINKKMAKQFDFLKEGDVLTEEFILALPPEQQ 636
Query: 142 --AYAKNRRAIVFLKGCRAN 159
A NRR + N
Sbjct: 637 EIADQINRRTEFKVLRTNYN 656
>gi|91223208|ref|ZP_01258474.1| putative sodium-type flagellar protein MotY precursor [Vibrio
alginolyticus 12G01]
gi|91192021|gb|EAS78284.1| putative sodium-type flagellar protein MotY precursor [Vibrio
alginolyticus 12G01]
Length = 313
Score = 58.7 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
F+ ++ L L S++ + LI+GH D +GS +++++ RA V N
Sbjct: 185 FEFGQKTLSRGQKATLEALYSYVSVDDRVTKILIDGHTDNVGSSLTNLSVSRTRAEQVTN 244
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ G+ S ++ ++G P + + AKNRR + L
Sbjct: 245 ALIELGVDESMIETRAHGSRYPIASNNSVNGQAKNRRVTLRL 286
>gi|77457455|ref|YP_346960.1| OmpA/MotB [Pseudomonas fluorescens Pf0-1]
gi|77381458|gb|ABA72971.1| putative outer membrane protein [Pseudomonas fluorescens Pf0-1]
Length = 364
Score = 58.7 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 32/71 (45%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
L+ GH+D G+ +++ L RA AV F G+ R+ + G E P +
Sbjct: 202 VLVLGHSDTTGAAPANVKLSQERAQAVAAIFRLSGLQRDRLMLRGMGSEAPRAANDSVEG 261
Query: 143 YAKNRRAIVFL 153
A NRR + +
Sbjct: 262 RALNRRVELLV 272
>gi|285019096|ref|YP_003376807.1| outer membrane protein [Xanthomonas albilineans GPE PC73]
gi|283474314|emb|CBA16815.1| hypothetical outer membrane protein [Xanthomonas albilineans]
Length = 216
Score = 58.7 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 42/115 (36%), Gaps = 10/115 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLS----NLGSWLEKHDCDFLIEGHADELG------SR 95
+ +V F +S ++P +L L +L+ + ++ G D+
Sbjct: 85 IGIRGNVLFALNSDQLQPQGRDLLDSLATPLAGYLKARNEILMVSGFTDDRQVRVGNRQF 144
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
+ L RA V + G+ A + ++G + P D+ A NRR
Sbjct: 145 VDNWELSAERALTVTRALIDAGVPADAIFAAAFGAQQPVASNADDAGRASNRRVE 199
>gi|149915595|ref|ZP_01904121.1| OmpA family domain protein [Roseobacter sp. AzwK-3b]
gi|149810487|gb|EDM70330.1| OmpA family domain protein [Roseobacter sp. AzwK-3b]
Length = 340
Score = 58.7 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 40/130 (30%), Gaps = 1/130 (0%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEG 87
+ + +L + + D F S + + + E + G
Sbjct: 210 PTPAQDLALAEALLDWGHVRLADLEFETGRSALGQGPFASLAALAAFLTEDDGRRVALVG 269
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
H D +G+ +I L RA AV + + + +++ G P + N
Sbjct: 270 HTDSVGALEPNIDLSRARATAVMTRLIDKYGVRPEQLEARGVGYLAPIASNRTDTGRDAN 329
Query: 147 RRAIVFLKGC 156
RR L
Sbjct: 330 RRVEAVLLNT 339
>gi|296114560|ref|ZP_06833213.1| hypothetical protein GXY_02241 [Gluconacetobacter hansenii ATCC
23769]
gi|295978916|gb|EFG85641.1| hypothetical protein GXY_02241 [Gluconacetobacter hansenii ATCC
23769]
Length = 321
Score = 58.7 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 45/117 (38%), Gaps = 11/117 (9%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIEGHADE---LGSRN 96
V F S + P IQ + LG L++ ++GHAD +
Sbjct: 202 FQSEVLFPVGSADLSPEGIQEIKVLGRTLKQVAQQIPPSVPWILRVDGHADRLPIHTAFP 261
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA V +A GIS + T + P G +A+A+NRR L
Sbjct: 262 SNWELSSARAITVVKMLIADGISPRHLAATGFADFQPLDNGTTAEAFARNRRIEFRL 318
>gi|269965412|ref|ZP_06179532.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
gi|269830058|gb|EEZ84287.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
Length = 339
Score = 58.7 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
F+ ++ L L S++ + LI+GH D +GS +++++ RA V N
Sbjct: 211 FEFGQKTLSRGQKATLEALYSYVSVDDRVTKILIDGHTDNVGSSLTNLSVSRTRAEQVTN 270
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ G+ S ++ ++G P + + AKNRR + L
Sbjct: 271 ALIELGVDESMIETRAHGSRYPIASNNSVNGQAKNRRVTLRL 312
>gi|308184601|ref|YP_003928734.1| flagellar motor protein MotB [Helicobacter pylori SJM180]
gi|308060521|gb|ADO02417.1| flagellar motor protein MotB [Helicobacter pylori SJM180]
Length = 257
Score = 58.7 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/152 (15%), Positives = 50/152 (32%), Gaps = 7/152 (4%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS-SYSIRPADIQV 68
+++ + S I+ + + + ++ F+ + S +I +
Sbjct: 82 MASESSKPASQNTETKATIARKGEGSVLEQIDQGSILKLPSNLLFENATSDTINQDMMLY 141
Query: 69 LSNLGSWLEKHDCDFLIE--GHADELG----SRNSSIALGLRRAYAVFNYFVARGISASR 122
+ + ++K I G D S L RAY V + G+ ++
Sbjct: 142 IERIAKIIQKLPKRVHINVRGFTDNTPLIKTRFKSHYELAANRAYRVMKVLIQYGVDPNQ 201
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ +SYG P + KN R +F
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEIFFS 233
>gi|255036435|ref|YP_003087056.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
18053]
gi|254949191|gb|ACT93891.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
Length = 464
Score = 58.7 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLG-SWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
+++F + + + + L ++ + ++ D +++GH D GS ++ L +R V
Sbjct: 356 TLYFSQGTEVLEDSALSDLDSIVSYFQKRQDLRLVLKGHTDNTGSFEKNLELSNKRVETV 415
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
Y + +GI A R++ + YG P E NRR V+
Sbjct: 416 KAYLIGKGIIAERIEGSGYGSAQPRQMNQTEATKKSNRRVEVW 458
>gi|224371370|ref|YP_002605534.1| MotB4 [Desulfobacterium autotrophicum HRM2]
gi|223694087|gb|ACN17370.1| MotB4 [Desulfobacterium autotrophicum HRM2]
Length = 425
Score = 58.7 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 41/118 (34%), Gaps = 4/118 (3%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD----ELGSR 95
LQ G +V D + ++ + + I+GH D +
Sbjct: 305 LQAGLLFESGSAVLGDQGRIHLTTLAETLMDIAKKIPDDINWILRIDGHTDRVPINNAAF 364
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA AV + RG+ RM + K P AY +NRR + L
Sbjct: 365 PSNWELSAARAVAVVRFLSQRGVPEKRMAAAGFSKYHPIDRADTPAAYQRNRRIEIKL 422
>gi|330502362|ref|YP_004379231.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
gi|328916648|gb|AEB57479.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
Length = 313
Score = 58.7 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 42/73 (57%)
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
F I+GHAD G+R ++ L RRA AV Y VA GI ++ + +G+ P V ++E
Sbjct: 212 NSFQIDGHADNSGNRLTNRDLSRRRALAVQEYLVAGGIPVEQITMRFHGERYPLVPNNNE 271
Query: 141 DAYAKNRRAIVFL 153
AKNRRA + L
Sbjct: 272 ANRAKNRRATLRL 284
>gi|308062136|gb|ADO04024.1| flagellar motor protein MotB [Helicobacter pylori Cuz20]
gi|308063396|gb|ADO05283.1| flagellar motor protein MotB [Helicobacter pylori Sat464]
Length = 255
Score = 58.7 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 7/152 (4%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS-SYSIRPADIQV 68
+++ + S I+ + + + ++ F+ + S +I +
Sbjct: 82 MASESSKPASQNTETKATIARKGEGSVLEQIDQGSILKLPSNLLFENATSDAINQDMMLY 141
Query: 69 LSNLGSWLEKHDCDFLIE--GHADELG----SRNSSIALGLRRAYAVFNYFVARGISASR 122
L + ++K I G D+ S L RAY V + G++ ++
Sbjct: 142 LERIAKIIQKLPKRVHINVRGFTDDTPLDKTRFKSHYELAANRAYRVMKVLIQYGVNPNQ 201
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ +SYG P + KN R +F
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEIFFS 233
>gi|91224536|ref|ZP_01259798.1| putative outer membrane protein [Vibrio alginolyticus 12G01]
gi|269968325|ref|ZP_06182346.1| outer membrane protein, putative [Vibrio alginolyticus 40B]
gi|91190878|gb|EAS77145.1| putative outer membrane protein [Vibrio alginolyticus 12G01]
gi|269827061|gb|EEZ81374.1| outer membrane protein, putative [Vibrio alginolyticus 40B]
Length = 204
Score = 58.7 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 56/138 (40%), Gaps = 1/138 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
D + + + S ++ + F S I P + + L +L+++
Sbjct: 52 DMCPGTPEGSEVDNDGCGEYIKASDNMQVRILFANDSDEINPVFRRQVRELSDFLKEYPT 111
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ G+A ++G + L RRA V ++ I SR+++ +G + G DE
Sbjct: 112 TSIELHGYASKVGGSKHNQDLSERRARNVREALLSYDIEPSRVRIVGFGDTHLAQQGTDE 171
Query: 141 DAYAKNRRAIVFLKGCRA 158
++A NRR + G +
Sbjct: 172 VSHALNRRVTASVVGYKG 189
>gi|73537739|ref|YP_298106.1| hypothetical protein Reut_B3905 [Ralstonia eutropha JMP134]
gi|72121076|gb|AAZ63262.1| OmpA/MotB [Ralstonia eutropha JMP134]
Length = 215
Score = 58.7 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/116 (23%), Positives = 45/116 (38%), Gaps = 10/116 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD----FLIEGHADELG------SR 95
+ SV F +S ++P VL +L L + ++ G D+
Sbjct: 85 IGINGSVLFAINSDQLQPQGRDVLKSLAGPLSAYLRSRDEILMVSGFTDDQQVRERNRRF 144
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ L +RA V + GI A+ + ++G E P DE A+NRR +
Sbjct: 145 ADNWELSAQRALTVTRALIDAGIPAASVFSAAFGAEQPVTSNADEAGRARNRRVEI 200
>gi|332673379|gb|AEE70196.1| flagellar motor protein MotB [Helicobacter pylori 83]
Length = 255
Score = 58.7 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/152 (15%), Positives = 51/152 (33%), Gaps = 7/152 (4%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS-SYSIRPADIQV 68
+++ + S I+ + + + ++ F+ + S +I +
Sbjct: 82 MASESSKPASQNTETKATIARKGEGSVLEQIDQGSILKLPSNLLFENATSDTINQDMMLY 141
Query: 69 LSNLGSWLEKHDCDFLIEGHA---DELGS---RNSSIALGLRRAYAVFNYFVARGISASR 122
+ + ++K I D + S L RAY V + G++ ++
Sbjct: 142 IERIAKIIQKLPKRVHINVRGFTDDTPLTKTRFKSHYELAANRAYRVMKVLIQYGVNPNQ 201
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ +SYG P + KN R +F
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEIFFS 233
>gi|52840894|ref|YP_094693.1| outer membrane protein, OmpA family protein [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
gi|52628005|gb|AAU26746.1| outer membrane protein, OmpA family protein [Legionella pneumophila
subsp. pneumophila str. Philadelphia 1]
Length = 249
Score = 58.7 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 1/105 (0%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRA 106
+ +F SS + L+N+ L + + G D +GSR+ L +A
Sbjct: 127 IPTDKYFMFSSPRLNEICYPGLNNVIRLLNFYPQSTIYVAGFTDNVGSRSHKRKLSQAQA 186
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ + A GI+A R+K YG + A+NRR +
Sbjct: 187 ETMMTFLWANGIAAKRLKAEGYGDKNAISDNAIIHGSAQNRRIEI 231
>gi|307246344|ref|ZP_07528422.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|307255330|ref|ZP_07537142.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|307259780|ref|ZP_07541500.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|306852754|gb|EFM84981.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|306861717|gb|EFM93699.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|306866170|gb|EFM98038.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
Length = 369
Score = 58.7 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 48/123 (39%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD S++PA L + + + G+ D +G S++ L
Sbjct: 243 AFSSDVLFDFGKSSLKPAAATALDAANTEIANLGLATPAIQVNGYTDRIGKEASNLKLSQ 302
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLK 154
RRA V NY V++G + + + YG+ P A +RR V ++
Sbjct: 303 RRAETVANYLVSKGQNPANVTAVGYGEANPVTGATCDAVKGRKALIACLAPDRRVEVQVQ 362
Query: 155 GCR 157
G +
Sbjct: 363 GAK 365
>gi|296389028|ref|ZP_06878503.1| putative ABC-type periplasmic phosphate-binding protein
[Pseudomonas aeruginosa PAb1]
Length = 461
Score = 58.7 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
Query: 64 ADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
++L L + + L+ G D S+ L RA AV ARG + R
Sbjct: 374 DVQRLLDYLRQNQKLQERTVLV-GFGDPKSDAERSVLLSRLRAMAVRREL-ARGGVSFR- 430
Query: 124 KVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ +G E+P E KNRR V++
Sbjct: 431 EIAGFGDELPVASNDQELGRQKNRRVEVWV 460
>gi|237750612|ref|ZP_04581092.1| flagellar motor rotation protein MotB [Helicobacter bilis ATCC
43879]
gi|229373702|gb|EEO24093.1| flagellar motor rotation protein MotB [Helicobacter bilis ATCC
43879]
Length = 255
Score = 58.7 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 47/127 (37%), Gaps = 5/127 (3%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQV---LSNLGSWLEKHDCDFLIEGHADELGS 94
+++ + + + F+ + + D + L + I G+ D
Sbjct: 116 EQIEQGTTLRLPSDILFEPGTAELVNQDRKTELDLLATAIAKMPPEVTINIRGYTDNSSP 175
Query: 95 --RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
++ L RA V Y ++RG+ +R+ TSYG+ P V E N R VF
Sbjct: 176 AGYRNNYELAAARASNVMEYLMSRGVDPARLSFTSYGQYNPIVPNTSEVNRRANNRVEVF 235
Query: 153 LKGCRAN 159
+ +
Sbjct: 236 FATTKTS 242
>gi|150010324|ref|YP_001305067.1| outer membrane protein OmpA family protein [Parabacteroides
distasonis ATCC 8503]
gi|255012413|ref|ZP_05284539.1| outer membrane protein OmpA family protein [Bacteroides sp. 2_1_7]
gi|262382396|ref|ZP_06075533.1| outer membrane protein OmpA [Bacteroides sp. 2_1_33B]
gi|149938748|gb|ABR45445.1| outer membrane protein OmpA family protein [Parabacteroides
distasonis ATCC 8503]
gi|262295274|gb|EEY83205.1| outer membrane protein OmpA [Bacteroides sp. 2_1_33B]
Length = 658
Score = 58.7 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 52/140 (37%), Gaps = 28/140 (20%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
V D++F+D ++RP + L + + + + H D G+ + L RRA
Sbjct: 517 VIDNIFYDFDKATLRPESKKALDEMIKMLNDNPNVTIELGAHTDRKGTDQYNERLAQRRA 576
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGH---------------DED---------- 141
+V +Y +A GI A+R++ YG+ +P E+
Sbjct: 577 QSVVDYLIAGGIEAARLEAKGYGESVPKTINKKMAKQFDFLKEGDVLTEEFILALPPEQQ 636
Query: 142 --AYAKNRRAIVFLKGCRAN 159
A NRR + N
Sbjct: 637 EIADQINRRTEFKVLRTNYN 656
>gi|294139759|ref|YP_003555737.1| OmpA family protein [Shewanella violacea DSS12]
gi|293326228|dbj|BAJ00959.1| OmpA family protein [Shewanella violacea DSS12]
Length = 361
Score = 58.7 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 59/142 (41%), Gaps = 7/142 (4%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
+ ++ TV E++ Q S + F +S +++ + + L +++
Sbjct: 219 CADTSANHQVDANGCTVYTETTEQRDVGS-----IQFANNSSAVKTESFERIEKLATYMN 273
Query: 78 KHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSV 135
+ LI GHA +G + ++ L +RA AV V + + R++ +G P +
Sbjct: 274 TNPKSTVLISGHASNVGKADYNMILSDKRAKAVAKILVEKFGISQDRVEAKGFGVTQPII 333
Query: 136 YGHDEDAYAKNRRAIVFLKGCR 157
G +A NRR + G +
Sbjct: 334 QGRSVEANKANRRIEAQVTGVK 355
>gi|117617594|ref|YP_855822.1| major outer membrane protein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117559001|gb|ABK35949.1| major outer membrane protein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 344
Score = 58.7 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 58/146 (39%), Gaps = 16/146 (10%)
Query: 28 ISSPDTVLNESSLQEQFSS----SVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHD 80
+P V+ E+ ++ V F S++P + L+ L + D
Sbjct: 195 APAPAPVVEEAPAPAPQVVEKNFALNSDVLFAFGKDSLKPEGVAALNGLYQQIVEFQPKD 254
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS------ 134
+ ++ G+ D +GS + L RA V N+ V++G++AS++ V G+ P
Sbjct: 255 GNAVVVGYTDRIGSDAYNQKLSEARARTVANFLVSKGMAASKVAVEGRGEANPVTGTKCN 314
Query: 135 ---VYGHDEDAYAKNRRAIVFLKGCR 157
A +RR V + G +
Sbjct: 315 GVKAKAQLISCLAPDRRVEVRVSGVQ 340
>gi|328468979|gb|EGF39939.1| putative outer membrane protein [Vibrio parahaemolyticus 10329]
Length = 206
Score = 58.7 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 68/189 (35%), Gaps = 31/189 (16%)
Query: 1 MQYSTIFIILSAITMMSIS-------------GIDNLDTKISSPDTVLNESSLQEQF--- 44
M+ + + LS I + + D + D V+N L
Sbjct: 1 MKPMKLLLALSVIAVTQQAIAEDEYDYRAFPTAEQIADLQDEDNDGVINARDLCPGTPAG 60
Query: 45 --------------SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHA 89
S + V F S I P + + L +L+ + ++G+A
Sbjct: 61 SEVDNDGCGEYIKASEKMQVRVLFANDSDEINPVFRRQIRELSEFLKDYPTTSIELQGYA 120
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
+ G + L RRA V + ++ GI +R+++ +G + G D+ ++A NRR
Sbjct: 121 SKTGDSKHNQDLSERRAKNVRDALLSYGIEPNRVRIIGFGDTHLAEQGTDQVSHALNRRV 180
Query: 150 IVFLKGCRA 158
+ G +
Sbjct: 181 TASVVGYKG 189
>gi|332288389|ref|YP_004419241.1| outer membrane protein A [Gallibacterium anatis UMN179]
gi|330431285|gb|AEC16344.1| outer membrane protein A [Gallibacterium anatis UMN179]
Length = 247
Score = 58.7 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 7/116 (6%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIAL 101
++ + FD S +++P +V+ +L + L K+ I G+ D LGS + ++AL
Sbjct: 130 DRTEYQLSSDFLFDFDSANLKPESQKVIEDLVNKLSKNK-QIWITGYTDRLGSESYNLAL 188
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK------NRRAIV 151
RRA AV N VA GI ASR+K GK E A NRR ++
Sbjct: 189 SQRRAVAVKNAMVALGIPASRIKAIGMGKADQVKACEKETGSALRQCLAPNRRVVI 244
>gi|119898879|ref|YP_934092.1| outer membrane protein A [Azoarcus sp. BH72]
gi|119671292|emb|CAL95205.1| outer membrane protein A precursor [Azoarcus sp. BH72]
Length = 238
Score = 58.7 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 10/122 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FD ++P L +L + + + ++ GH D LGS + + L R
Sbjct: 117 IKLSADTLFDFDKAVLKPEGRTKLDDLAAKAKGIKLEVILAVGHTDRLGSDSYNQKLSER 176
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE---------DAYAKNRRAIVFLKG 155
RA AV Y V++G+ A+R+ G++ P + + +RR V + G
Sbjct: 177 RAAAVKTYLVSKGVEANRVYTEGKGEKQPVTGNKCDSVKNRKALIECLQPDRRVEVEVIG 236
Query: 156 CR 157
+
Sbjct: 237 SK 238
>gi|189461399|ref|ZP_03010184.1| hypothetical protein BACCOP_02054 [Bacteroides coprocola DSM 17136]
gi|189431928|gb|EDV00913.1| hypothetical protein BACCOP_02054 [Bacteroides coprocola DSM 17136]
Length = 239
Score = 58.7 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 55/144 (38%), Gaps = 12/144 (8%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW--L 76
+ + + + V + + LQ + + F TSS S+ + LS +
Sbjct: 79 AAEQAAQIQGAEVEQVTDNNGLQA-VKVTFDSGILFSTSSSSLSTSAKSSLSKFANNVLN 137
Query: 77 EKHDCDFLIEGHADEL--------GSRNSSIALGLRRAYAVFNYFVARGISASRMKVT-S 127
+ D D I G+ D S + L RA +V +Y + G+SAS++K
Sbjct: 138 QNRDMDVAIYGYTDNTGWKNSTAEQSVQKNQELSQARAQSVSSYLLGCGVSASQIKTVEG 197
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIV 151
G+ P E +NRR V
Sbjct: 198 MGESNPVADNSTEAGRKENRRVEV 221
>gi|296115020|ref|ZP_06833663.1| outer membrane protein OmpA [Gluconacetobacter hansenii ATCC 23769]
gi|295978438|gb|EFG85173.1| outer membrane protein OmpA [Gluconacetobacter hansenii ATCC 23769]
Length = 392
Score = 58.7 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 43/109 (39%), Gaps = 7/109 (6%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADE------LGSRNSSIALGLR 104
VFFD ++ ++++ + G+ D + ++ L LR
Sbjct: 283 VFFDWDGAALTGRAREIVAEAAQASTHVQTTRIEVNGYTDNSAAQPGPRGQQYNMGLSLR 342
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA +V + G+ A+ + + YG+ P V + +NRR + L
Sbjct: 343 RANSVKAELIRDGVPANAIDIQGYGEAHPLVPTGPDTREPQNRRVEIIL 391
>gi|145298281|ref|YP_001141122.1| outer membrane protein [Aeromonas salmonicida subsp. salmonicida
A449]
gi|1332434|emb|CAA63036.1| outer membrane protein [Aeromonas salmonicida]
gi|142851053|gb|ABO89374.1| outer membrane protein [Aeromonas salmonicida subsp. salmonicida
A449]
gi|1588798|prf||2209353A major outer membrane protein OmpAI
Length = 339
Score = 58.7 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 53/123 (43%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F S++ ++ L++L + D ++ G+ D +GS + L
Sbjct: 213 ALNSDVLFAFGKDSLKAEGVEALNSLYQQIVDFQPKDGSAVVVGYTDRIGSDAYNQKLSE 272
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE---------DAYAKNRRAIVFLK 154
RA V N+ V++G++AS++ V G+ P + A +RR + +
Sbjct: 273 ARARTVANFLVSKGMAASKVAVEGRGEANPVTGNKCDGVKAKAQLISCLAPDRRVEIRVS 332
Query: 155 GCR 157
G +
Sbjct: 333 GVQ 335
>gi|86130223|ref|ZP_01048823.1| type VI secretion system OmpA/MotB family protein [Dokdonia
donghaensis MED134]
gi|85818898|gb|EAQ40057.1| type VI secretion system OmpA/MotB family protein [Dokdonia
donghaensis MED134]
Length = 228
Score = 58.7 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSV 135
D I GH D +G+ + + GL+++ + Y AR ++ TS G+E P
Sbjct: 150 NNPDKKVTILGHTDNVGNARDNFSTGLKKSRQIKWYLTARRGIPRSKITATSRGEEEPIA 209
Query: 136 YGHDEDAYAKNRRAIVFL 153
+ +N R + +
Sbjct: 210 SNNTVSGRRQNNRIEIIV 227
>gi|163745692|ref|ZP_02153052.1| hypothetical protein OIHEL45_08875 [Oceanibulbus indolifex HEL-45]
gi|161382510|gb|EDQ06919.1| hypothetical protein OIHEL45_08875 [Oceanibulbus indolifex HEL-45]
Length = 645
Score = 58.7 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 43/125 (34%), Gaps = 14/125 (11%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG--------SWLEKHDCDFLIEGHADE-- 91
E V F S + ++ + + D ++GH D
Sbjct: 517 EGDRFVFSSEVLFGQGSAVLSQDGQGEIAKVAGILRSVVDDIPAEIDWVIRVDGHTDNVP 576
Query: 92 ---LGSRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
G + L RA +V Y V GI+ R+ +G+ P G+ E A A+NR
Sbjct: 577 LSGFGEFADNWELSQARALSVVKYMVNFLGIAPDRLAANGFGQYQPVAEGNTEAARAQNR 636
Query: 148 RAIVF 152
R +
Sbjct: 637 RIELK 641
>gi|58616261|ref|YP_195390.1| OmpA family protein [Azoarcus sp. EbN1]
gi|56315722|emb|CAI10366.1| OmpA family protein [Aromatoleum aromaticum EbN1]
Length = 201
Score = 58.3 bits (139), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 53/129 (41%), Gaps = 6/129 (4%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI 85
T +S + S+ + G +VFF S + S+ D +
Sbjct: 77 TASTSAKSDGTGSNTGDYDLIP-GATVFFAFDSTVPLNP-----EVISSFQFGDDTKIRL 130
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
G D +G+ + + L +RA +V + F +G+ S+M++ S G P E K
Sbjct: 131 IGRTDPIGTNSYNDRLAYKRAASVASLFKLKGMKQSQMELVSLGARSPIAPTDTESGRQK 190
Query: 146 NRRAIVFLK 154
NR+ ++ L+
Sbjct: 191 NRQVLIELR 199
>gi|329114347|ref|ZP_08243109.1| Outer membrane protein [Acetobacter pomorum DM001]
gi|326696423|gb|EGE48102.1| Outer membrane protein [Acetobacter pomorum DM001]
Length = 376
Score = 58.3 bits (139), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 7/109 (6%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRN------SSIALGLR 104
VFFD + Q+++ + G+ D + ++ L LR
Sbjct: 267 VFFDWDKSVLTARARQIVAEAAQASTHVQTTRIEVNGYTDNSAAHPGPRGEKYNLGLSLR 326
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA +V + G+ AS + V YG+ P V +NRR + L
Sbjct: 327 RADSVKAELIRDGVPASAIDVHGYGEAHPLVPTGPNTREPQNRRVEIIL 375
>gi|258541881|ref|YP_003187314.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-01]
gi|256632959|dbj|BAH98934.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-01]
gi|256636016|dbj|BAI01985.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-03]
gi|256639071|dbj|BAI05033.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-07]
gi|256642125|dbj|BAI08080.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-22]
gi|256645180|dbj|BAI11128.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-26]
gi|256648235|dbj|BAI14176.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-32]
gi|256651288|dbj|BAI17222.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256654279|dbj|BAI20206.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-12]
Length = 375
Score = 58.3 bits (139), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 7/109 (6%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRN------SSIALGLR 104
VFFD + Q+++ + G+ D + ++ L LR
Sbjct: 266 VFFDWDKSVLTARARQIVAEAAQASTHVQTTRIEVNGYTDNSAAHPGPRGEKYNLGLSLR 325
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA +V + G+ AS + V YG+ P V +NRR + L
Sbjct: 326 RADSVKAELIRDGVPASAIDVHGYGEAHPLVPTGPNTREPQNRRVEIIL 374
>gi|261839369|gb|ACX99134.1| flagellar motor protein MotB [Helicobacter pylori 52]
Length = 255
Score = 58.3 bits (139), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/152 (15%), Positives = 50/152 (32%), Gaps = 7/152 (4%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS-SYSIRPADIQV 68
+++ + S I+ + + + ++ F+ + S +I +
Sbjct: 82 MASESSKPASQNTETKATIARKGEGSVLEQIDQGSILKLPSNLLFENATSDTINQDMMLY 141
Query: 69 LSNLGSWLEKHDCDFLIEGHA---DELGS---RNSSIALGLRRAYAVFNYFVARGISASR 122
+ + ++K I D + S L RAY V + G + ++
Sbjct: 142 IERIAKIIQKLPKRVHINVRGFTDDTPLTKTRFKSHYELAANRAYRVMKVLIQYGANPNQ 201
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ +SYG P + KN R +F
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEIFFS 233
>gi|83647690|ref|YP_436125.1| outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hahella chejuensis KCTC 2396]
gi|83635733|gb|ABC31700.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Hahella chejuensis KCTC 2396]
Length = 274
Score = 58.3 bits (139), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 49/147 (33%), Gaps = 12/147 (8%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQ--------FSSSVGDSVFFDTSSYSIRPADI 66
+ S S + D + D + +E +F+ ++ D+
Sbjct: 105 VTSASTTEGNDMTVLVLDDATAAALEKEYGGANQFAGVEPPQPRVIFYPLEKSNLNQEDM 164
Query: 67 QVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
L +L H I GH D G + L RA V +Y + G +++V
Sbjct: 165 AALKQHADFLSVHPNYQIQIHGHTDASGQATYNERLSEERALRVADYLLNNGARPEQVEV 224
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+G P + + KNRR +
Sbjct: 225 FGWGSREPLL---TSSHHEKNRRVELI 248
>gi|330830632|ref|YP_004393584.1| major outer membrane protein OmpAII [Aeromonas veronii B565]
gi|328805768|gb|AEB50967.1| Major outer membrane protein OmpAII [Aeromonas veronii B565]
Length = 345
Score = 58.3 bits (139), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 50/130 (38%), Gaps = 12/130 (9%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADI---QVLSNLGSWLEKHDCDFLIEGHADELGSRNSSI 99
+ ++ V F ++ + L ++ D ++ G+ D +GS ++
Sbjct: 215 DQTFNLSSDVLFAFGKADLKQEGMSALDDLYQQIVDVQPKDGSAVVIGYTDRIGSDANNQ 274
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK---------NRRAI 150
L RA V ++ +++G+ A ++ + G P + AK +RR
Sbjct: 275 RLSEARAQTVADFLISKGLPADKVSIQGNGASNPVTGNQCDAIKAKAALIDCLGPDRRVE 334
Query: 151 VFLKGCRANT 160
V + G + +
Sbjct: 335 VRVTGVQGGS 344
>gi|167033093|ref|YP_001668324.1| OmpA/MotB domain-containing protein [Pseudomonas putida GB-1]
gi|166859581|gb|ABY97988.1| OmpA/MotB domain protein [Pseudomonas putida GB-1]
Length = 435
Score = 58.3 bits (139), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 46/137 (33%), Gaps = 5/137 (3%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ + Q + + + F S S+ ++ + + +L +
Sbjct: 300 SQQIKAQPVPPQSDMPPRYRTLAQQAQRLSVNFRFQEGSASLDNKALRDVQRVAEYLRQA 359
Query: 80 ---DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
++ G D + + L RA AV G+ ++VT G E+P
Sbjct: 360 GKLQSKAVLVGFGDPKETPGRAALLSRLRAQAVRRELARDGVEV--LEVTGMGDELPVAG 417
Query: 137 GHDEDAYAKNRRAIVFL 153
E +NRR V++
Sbjct: 418 NELEQGRLRNRRVEVWV 434
>gi|323493119|ref|ZP_08098250.1| putative sodium-type flagellar protein MotY precursor [Vibrio
brasiliensis LMG 20546]
gi|323312590|gb|EGA65723.1| putative sodium-type flagellar protein MotY precursor [Vibrio
brasiliensis LMG 20546]
Length = 304
Score = 58.3 bits (139), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
L++GH D G+R S++AL RA V G+S S ++V ++G P
Sbjct: 209 SKILVDGHTDSSGARASNLALSRVRAELVSKQLHHLGVSQSMIEVRAHGSRYPIATNTTT 268
Query: 141 DAYAKNRRAIVFLKGCRAN 159
AKNRR + L R+N
Sbjct: 269 AGKAKNRRVTLRL--VRSN 285
>gi|170697803|ref|ZP_02888889.1| type IV / VI secretion system protein, DotU family [Burkholderia
ambifaria IOP40-10]
gi|170137305|gb|EDT05547.1| type IV / VI secretion system protein, DotU family [Burkholderia
ambifaria IOP40-10]
Length = 404
Score = 58.3 bits (139), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
Query: 81 CDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ G+AD + + S+ AL RA V V+ G+SA R+ V G+
Sbjct: 326 ATVHVAGYADSTSARSTRQASNQALSEARARHVAQILVSAGVSAPRISVEGNGEADSLAD 385
Query: 137 GHDEDAYAKNRRAIVFL 153
A+NRR V +
Sbjct: 386 NGTAAGRARNRRVEVTI 402
>gi|84514671|ref|ZP_01002035.1| flagellar motor protein [Loktanella vestfoldensis SKA53]
gi|84511722|gb|EAQ08175.1| flagellar motor protein [Loktanella vestfoldensis SKA53]
Length = 533
Score = 58.3 bits (139), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 40/126 (31%), Gaps = 14/126 (11%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG--------SWLEKHDCDFLIEGHADELG 93
E V F+ + P ++N+ D ++GH D+
Sbjct: 405 EGDRFVFSSEVLFEVGRADLSPQGRDEIANVAGILNDIADDIPAGIDWIIRVDGHTDDNP 464
Query: 94 S-----RNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+ L RA +V + GI R+ +G+ P A A+NR
Sbjct: 465 IAAGGRFADNWELSQARALSVVRFMVDDLGIPPMRLAANGFGEYQPLNTADTAQARAQNR 524
Query: 148 RAIVFL 153
R + L
Sbjct: 525 RIELKL 530
>gi|292488104|ref|YP_003530981.1| putative type VI secretion system core protein [Erwinia amylovora
CFBP1430]
gi|292899316|ref|YP_003538685.1| outer membrane protein [Erwinia amylovora ATCC 49946]
gi|291199164|emb|CBJ46278.1| putative outer membrane protein [Erwinia amylovora ATCC 49946]
gi|291553528|emb|CBA20573.1| putative type VI secretion system, core protein [Erwinia amylovora
CFBP1430]
gi|312172236|emb|CBX80493.1| putative type VI secretion system, core protein [Erwinia amylovora
ATCC BAA-2158]
Length = 407
Score = 58.3 bits (139), Expect = 3e-07, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 36/125 (28%), Gaps = 5/125 (4%)
Query: 34 VLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL- 92
LN + + F + P +++ + S +E LI + D
Sbjct: 267 QLNVTEGDYGNRVILPADSLFSPPGTELTPEGRALIARVASAMESLKGTLLIAVYTDNRL 326
Query: 93 ---GSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRR 148
S+ +A A+ N + ++ + A+NRR
Sbjct: 327 LPSTQFTSNYEYSAAQAQAISNMMMQLIAQPCINVRAEGRADSRELLPNSSAHNRAQNRR 386
Query: 149 AIVFL 153
+ L
Sbjct: 387 VEITL 391
>gi|260574834|ref|ZP_05842836.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
gi|259022839|gb|EEW26133.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
Length = 190
Score = 58.3 bits (139), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 33/100 (33%), Gaps = 4/100 (4%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F T S ++ L+ I GH D S ++ L RRA +V N
Sbjct: 91 LFATDSATLTAHGRSFLTQFFQQAGAFGY--AIYGHTDSRASDEYNMRLSQRRAASVANI 148
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ G R +G+ P +NRR V
Sbjct: 149 ARSVGAVVER--EIGFGERQPIASNGSASGMQQNRRVEVV 186
>gi|89890263|ref|ZP_01201773.1| putative outer membrane protein [Flavobacteria bacterium BBFL7]
gi|89517178|gb|EAS19835.1| putative outer membrane protein [Flavobacteria bacterium BBFL7]
Length = 571
Score = 58.3 bits (139), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 44/109 (40%), Gaps = 6/109 (5%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAV 109
++ +D Y IR L+ L +++ + I H D GS + L RA A
Sbjct: 459 NILYDLDKYYIRADAEPELNRLVQFMKDNPGVRIEISSHTDSRGSNAYNKTLSQNRASAA 518
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHD-----EDAYAKNRRAIVFL 153
+Y ++GI A+R+ YG+ D + NRR + +
Sbjct: 519 RDYIASQGIDANRVVGIGYGETRLLNRCADGIECSAAEHQINRRTEMKV 567
>gi|7327635|gb|AAF45029.2|AF146597_1 putative outer membrane protein [Aeromonas hydrophila]
Length = 344
Score = 58.3 bits (139), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 58/146 (39%), Gaps = 16/146 (10%)
Query: 28 ISSPDTVLNESSLQEQFSS----SVGDSVFFDTSSYSIRPA---DIQVLSNLGSWLEKHD 80
+P V+ E+ ++ V F S++P + L + D
Sbjct: 195 APAPAPVVEEAPAPAPQVVEKNFALNSDVLFAFGKDSLKPEGVAALNALYQQIVEFQPKD 254
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGH 138
+ ++ G+ D +GS + L RA V N+ V++G++AS++ + G+ P
Sbjct: 255 GNAVVVGYTDRIGSDAYNQKLSEARARTVANFLVSKGMAASKVAIEGRGEANPVTGTKCD 314
Query: 139 DEDAYAK-------NRRAIVFLKGCR 157
A A+ +RR V + G +
Sbjct: 315 GVKAKAQLISCLAPDRRVEVRVSGVQ 340
>gi|325266116|ref|ZP_08132800.1| outer membrane protein A [Kingella denitrificans ATCC 33394]
gi|324982346|gb|EGC17974.1| outer membrane protein A [Kingella denitrificans ATCC 33394]
Length = 178
Score = 58.3 bits (139), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/174 (20%), Positives = 60/174 (34%), Gaps = 19/174 (10%)
Query: 1 MQYSTIFIILSAITMMSISGID-----NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFD 55
M+ + +F L+A D + ++P V + Q + + D++F
Sbjct: 1 MKKTFLFAALAACLSTPALAKDYIHRWCAPEEPAAPVVVATPPAPQVERINLAADALFQF 60
Query: 56 TSSYSIR--PADIQVLSNLGSW---LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
S P L L + + + GH D LGS + LGL+RA V
Sbjct: 61 NRSSVKDLLPQGRATLDELAARLVSRQAQIDSIALVGHTDRLGSEQYNYNLGLKRAETVK 120
Query: 111 NYFVARGISASRMKVTSYGKEMPS--------VYGHDEDAYAKNRRAIVFLKGC 156
Y +G+ + S G+ P + +RR +V + G
Sbjct: 121 AYLQEKGVQDP-ISTRSAGETQPVTTDCHGTRATAALKACLQPDRRVVVEITGT 173
>gi|317011033|gb|ADU84780.1| flagellar motor protein MotB [Helicobacter pylori SouthAfrica7]
Length = 257
Score = 58.3 bits (139), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 51/152 (33%), Gaps = 7/152 (4%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS-SYSIRPADIQV 68
+++ + S I+ + + + S+ F+ + S +I +
Sbjct: 82 MASESSKPASQNTETKATIARKGEGSVLEQIDQGSILKLPSSLLFENATSDTINQDMMLY 141
Query: 69 LSNLGSWLEKHDCDFLIE--GHADELG----SRNSSIALGLRRAYAVFNYFVARGISASR 122
+ + ++K I G D+ S L RAY V + G+ ++
Sbjct: 142 IERIAKIIQKLPKRVHINVRGFTDDTPLAKTRFKSHYELAANRAYRVMKVLMQYGVDPNQ 201
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ +SYG P + KN R +F
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEIFFS 233
>gi|307294285|ref|ZP_07574129.1| OmpA/MotB domain protein [Sphingobium chlorophenolicum L-1]
gi|306880436|gb|EFN11653.1| OmpA/MotB domain protein [Sphingobium chlorophenolicum L-1]
Length = 358
Score = 58.3 bits (139), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
VFF+ I P +L N + ++ ++ G+AD GS + ++ L RRA
Sbjct: 247 PYIVFFEWDKSDITPDAATILDNAVSAYSNCGSAQVMLAGYADRSGSASYNVGLSQRRAD 306
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
AV Y ++GI + ++G+ P V D +NRR +
Sbjct: 307 AVKAYVASKGIPDGVITTQAFGEANPRVETADGVRELQNRRVEIT 351
>gi|229903070|ref|ZP_04518186.1| Outer membrane protein [Yersinia pestis Nepal516]
gi|229679980|gb|EEO76080.1| Outer membrane protein [Yersinia pestis Nepal516]
Length = 71
Score = 58.3 bits (139), Expect = 3e-07, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 14/42 (33%)
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+S + V YG P D A NRR + L
Sbjct: 1 MLSTSDVSPTCFAVQGYGATRPIADNDTPDGRALNRRVEISL 42
>gi|317153138|ref|YP_004121186.1| OmpA/MotB domain-containing protein [Desulfovibrio aespoeensis
Aspo-2]
gi|316943389|gb|ADU62440.1| OmpA/MotB domain protein [Desulfovibrio aespoeensis Aspo-2]
Length = 244
Score = 58.3 bits (139), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 44/132 (33%), Gaps = 6/132 (4%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
D V Q + ++ +FF + + P Q LS + + + G+A
Sbjct: 112 TDGVTVVREGQGRIRVTLRGDLFFAVNEAGLAPESGQYLSEIAEVVRLSVGTVHVIGYAS 171
Query: 91 -----ELGSRNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYA 144
AL RA V + + R R+ +T G+ P + G A
Sbjct: 172 EDEGGNEAGTRQGFALSTGRATEVADQLMTRFKVDPRRVVITGRGRLHPELPGTTPANQA 231
Query: 145 KNRRAIVFLKGC 156
NRR + +
Sbjct: 232 MNRRVEIVITNE 243
>gi|77460739|ref|YP_350246.1| OmpA/MotB [Pseudomonas fluorescens Pf0-1]
gi|77384742|gb|ABA76255.1| putative exported flagellar protein [Pseudomonas fluorescens Pf0-1]
Length = 302
Score = 58.3 bits (139), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 60 SIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG 117
+ A L + +++ ++GH+D G+R ++ L RRA AV ++F A G
Sbjct: 184 ELDAAAKAKLQVMLEYMKADPTVNHIELDGHSDNSGNRLTNRELSRRRALAVVDFFKANG 243
Query: 118 ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
I S++ V +G+ P V + AKNRR
Sbjct: 244 IQESQITVRFHGERYPLVPNTNAANRAKNRRV 275
>gi|261211744|ref|ZP_05926031.1| outer membrane protein [Vibrio sp. RC341]
gi|260839094|gb|EEX65726.1| outer membrane protein [Vibrio sp. RC341]
Length = 212
Score = 58.3 bits (139), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 56/108 (51%), Gaps = 1/108 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVF 110
+ F S +I PA + + + +L+ + ++G+A ++G + ++AL +R+ AV
Sbjct: 91 ILFANDSSAIEPAFLTQIRQMAEFLQGYPSTSIELQGYASKVGRADYNLALSKQRSEAVR 150
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
+ + GI SR+ + YG + G D+ ++A+NRR + G +
Sbjct: 151 DQLIRDGIDPSRVNIVGYGDSVLEAEGEDDISHARNRRVTATVVGYKG 198
>gi|317014225|gb|ADU81661.1| flagellar motor protein MotB [Helicobacter pylori Gambia94/24]
Length = 257
Score = 58.3 bits (139), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/152 (17%), Positives = 51/152 (33%), Gaps = 7/152 (4%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS-SYSIRPADIQV 68
+++ + S T I+ + + + S+ F+ + S +I +
Sbjct: 82 MASESSKPASQNTETKTTIARKGEGSVLEQIDQGSVLKLPSSLLFENATSDAINQDMMLY 141
Query: 69 LSNLGSWLEKHDCDFLIE--GHADELG----SRNSSIALGLRRAYAVFNYFVARGISASR 122
+ + ++K I G D S L RAY V + G+ ++
Sbjct: 142 IERIAKIIQKLPKRVHINVRGFTDNTPLNKTRFKSHYELAANRAYRVMKVLIQYGVDPNQ 201
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ +SYG P + KN R +F
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEIFFS 233
>gi|313107451|ref|ZP_07793639.1| putative ABC-type periplasmic phosphate-binding protein
[Pseudomonas aeruginosa 39016]
gi|310880141|gb|EFQ38735.1| putative ABC-type periplasmic phosphate-binding protein
[Pseudomonas aeruginosa 39016]
Length = 461
Score = 58.3 bits (139), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
Query: 64 ADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
++L L + + L+ G D S+ L RA AV ARG + R
Sbjct: 374 DVQRLLDYLRQNRKLQERTVLV-GFGDPKSDAERSVLLSRLRAMAVRREL-ARGGVSFR- 430
Query: 124 KVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ +G E+P E KNRR V++
Sbjct: 431 EIAGFGDELPVASNDQELGRQKNRRVEVWV 460
>gi|310767498|gb|ADP12448.1| OmpA family protein [Erwinia sp. Ejp617]
Length = 407
Score = 58.3 bits (139), Expect = 3e-07, Method: Composition-based stats.
Identities = 17/125 (13%), Positives = 37/125 (29%), Gaps = 5/125 (4%)
Query: 34 VLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL- 92
LN + + + F + P +++ + S +E LI + D
Sbjct: 267 QLNITDGDDGNKVILPIDSLFSPPGAELTPEGRALIARVASAMESLKGTLLIAVYTDNRL 326
Query: 93 ---GSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRR 148
S+ +A A+ + ++ G + + +NRR
Sbjct: 327 LPSTQFMSNDEYSAAQAQAIGTMMLQLIAQPCINVRAEGRGDSQGLLPNNSASNRTQNRR 386
Query: 149 AIVFL 153
+ L
Sbjct: 387 VEITL 391
>gi|296536082|ref|ZP_06898216.1| OmpA family protein [Roseomonas cervicalis ATCC 49957]
gi|296263579|gb|EFH10070.1| OmpA family protein [Roseomonas cervicalis ATCC 49957]
Length = 235
Score = 58.3 bits (139), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 13/119 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGS--------WLEKHDCDFLIEGHADELG-----S 94
V F + A Q L L + + ++GHAD
Sbjct: 114 FQGEVLFPVGGAELSAAGQQQLRALAQVLLEVTRRFPQDLAWILRVDGHADRSPLRAGAR 173
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA AV + + G+ +R+ T++G+ P G +A+A+NRR + L
Sbjct: 174 YASNWELSAARAIAVGQFLIGEGLPPNRVAATAFGEYQPIDSGDSPEAFARNRRIELRL 232
>gi|107101995|ref|ZP_01365913.1| hypothetical protein PaerPA_01003042 [Pseudomonas aeruginosa PACS2]
Length = 461
Score = 58.3 bits (139), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
Query: 64 ADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
++L L + + L+ G D S+ L RA AV ARG + R
Sbjct: 374 DVQRLLDYLRQNRKLQERTVLV-GFGDPKSDAERSVLLSRLRAMAVRREL-ARGGVSFR- 430
Query: 124 KVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ +G E+P E KNRR V++
Sbjct: 431 EIAGFGDELPVASNDQELGRQKNRRVEVWV 460
>gi|259908602|ref|YP_002648958.1| OmpA family protein [Erwinia pyrifoliae Ep1/96]
gi|224964224|emb|CAX55731.1| OmpA family protein [Erwinia pyrifoliae Ep1/96]
gi|283478573|emb|CAY74489.1| putative type VI secretion system, core protein [Erwinia pyrifoliae
DSM 12163]
Length = 407
Score = 58.3 bits (139), Expect = 3e-07, Method: Composition-based stats.
Identities = 17/125 (13%), Positives = 37/125 (29%), Gaps = 5/125 (4%)
Query: 34 VLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL- 92
LN + + + F + P +++ + S +E LI + D
Sbjct: 267 QLNITDGDDGNKVILPIDSLFSPPGAELTPEGRALIARVASAMESLKGTLLIAVYTDNRL 326
Query: 93 ---GSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRR 148
S+ +A A+ + ++ G + + +NRR
Sbjct: 327 LPSTQFMSNDEYSAAQAQAIGTMMLQLIAQPCINVRAEGRGDSQGLLPNNSASNRTQNRR 386
Query: 149 AIVFL 153
+ L
Sbjct: 387 VEITL 391
>gi|162147969|ref|YP_001602430.1| outer membrane lipoprotein [Gluconacetobacter diazotrophicus PAl 5]
gi|209542586|ref|YP_002274815.1| OmpA/MotB domain-containing protein [Gluconacetobacter
diazotrophicus PAl 5]
gi|172046688|sp|P84838|OMPC_GLUDA RecName: Full=Outer membrane protein; AltName: Full=OMPC; Flags:
Precursor
gi|161786546|emb|CAP56128.1| Outer membrane lipoprotein [Gluconacetobacter diazotrophicus PAl 5]
gi|209530263|gb|ACI50200.1| OmpA/MotB domain protein [Gluconacetobacter diazotrophicus PAl 5]
Length = 378
Score = 58.3 bits (139), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 40/109 (36%), Gaps = 7/109 (6%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRN------SSIALGLR 104
VFFD + ++++ + G+ D + ++ L +R
Sbjct: 269 VFFDWDRSDLTARAREIVAEAAQASTHVQTTRIEVNGYTDNSAAHPGPRGEKYNMGLSIR 328
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA +V + G+ + + YG++ P V +NRR + L
Sbjct: 329 RAQSVKAELIRDGVPTGAIDIHGYGEQHPLVPTGPNTREPQNRRVEIIL 377
>gi|152997425|ref|YP_001342260.1| OmpA/MotB domain-containing protein [Marinomonas sp. MWYL1]
gi|150838349|gb|ABR72325.1| OmpA/MotB domain protein [Marinomonas sp. MWYL1]
Length = 272
Score = 58.3 bits (139), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 53/133 (39%), Gaps = 4/133 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
++ + + S + + F Y + + +L + + L+ H L+EG+ D
Sbjct: 132 ASGQISVTESADWVSLELKSGLLFGQGEYDLTNEAVALLILVANVLKAHPSVILVEGNTD 191
Query: 91 ----ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S+ L R+ +V + V RG+ + + E P V ++ A +N
Sbjct: 192 DLPVNSRRLISNWHLSSLRSSSVVDELVYRGVDPKMIAPIGFSSEHPKVRNTNDYARQQN 251
Query: 147 RRAIVFLKGCRAN 159
RR I+ + A+
Sbjct: 252 RRVILRISKREAD 264
>gi|117618280|ref|YP_855820.1| major outer membrane protein OmpAII [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117559687|gb|ABK36635.1| major outer membrane protein OmpAII [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 351
Score = 58.3 bits (139), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 54/128 (42%), Gaps = 12/128 (9%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSI 99
+ ++ V F ++P +Q L +L + + D + ++ G+ D +GS ++
Sbjct: 213 DQTFNLSSDVLFAFGKAELKPEGMQALESLYQQIADVKPKDGNAVVMGYTDRIGSDANNQ 272
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAI 150
AL RA V N+ + +G+ A ++ + G+ P A A +RR
Sbjct: 273 ALSEARASTVANFLIGKGLPADKVSIQGNGESNPVTGSQCDAIKARAALIDCLAPDRRVE 332
Query: 151 VFLKGCRA 158
V + G +
Sbjct: 333 VRVTGTQG 340
>gi|213961761|ref|ZP_03390027.1| OmpA family protein [Capnocytophaga sputigena Capno]
gi|213955550|gb|EEB66866.1| OmpA family protein [Capnocytophaga sputigena Capno]
Length = 290
Score = 58.3 bits (139), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 42/114 (36%), Gaps = 6/114 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELG----SRNSSIA 100
++ D + F + SY+I VL + ++ +F++EGH D + +
Sbjct: 152 INISDKMLFSSGSYTISKNAKSVLEKVAKVVKNKPDFEFMVEGHTDNVNIKTGCIRDNWD 211
Query: 101 LGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L + RA + RM +P D + A NRR + +
Sbjct: 212 LSVMRATEIVRVLQKDFGVAPERMTAAGRSYYVPLASNGDANGRALNRRTRIVV 265
>gi|86131343|ref|ZP_01049941.1| OmpA family protein [Dokdonia donghaensis MED134]
gi|85817788|gb|EAQ38956.1| OmpA family protein [Dokdonia donghaensis MED134]
Length = 653
Score = 58.3 bits (139), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 47/123 (38%), Gaps = 8/123 (6%)
Query: 39 SLQEQFSSSVG-DSVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRN 96
L + + ++ + ++FD ++IRP L + E + H D
Sbjct: 528 ELGDDLAKTLELNPIYFDFDKHNIRPDAALELEKVIAVMREYPSLKIDVRSHTDSRAPDA 587
Query: 97 SSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGH-----DEDAYAKNRRAI 150
+++L RR + Y V +G + R+ YG+ + E+ + NRR+
Sbjct: 588 YNMSLSQRRNVSTIRYIVDQGGISMSRLTGRGYGETQLTNACGNGIECTEEEHQLNRRSE 647
Query: 151 VFL 153
+
Sbjct: 648 FII 650
>gi|115358236|ref|YP_775374.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD]
gi|115283524|gb|ABI89040.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
Length = 404
Score = 58.3 bits (139), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 4/77 (5%)
Query: 81 CDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ G+AD + + S+ AL RA V V+ G+SA R+ V G+
Sbjct: 326 ATVHVAGYADSTSARSTRQASNQALSEARARHVAQILVSAGVSAPRISVEGNGEADSLAD 385
Query: 137 GHDEDAYAKNRRAIVFL 153
A+NRR V +
Sbjct: 386 NGTAAGRARNRRVEVTI 402
>gi|165976856|ref|YP_001652449.1| major outer membrane protein [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|303253773|ref|ZP_07339908.1| major outer membrane protein [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307248471|ref|ZP_07530491.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
gi|307257499|ref|ZP_07539265.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|165876957|gb|ABY70005.1| major outer membrane protein [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|302647357|gb|EFL77578.1| major outer membrane protein [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|306855039|gb|EFM87222.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
gi|306864011|gb|EFM95928.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
Length = 368
Score = 58.3 bits (139), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 48/123 (39%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD S++PA L + + + G+ D +G S++ L
Sbjct: 242 AFSSDVLFDFGKSSLKPAAATALDAANTEIANLGLATPAIQVNGYTDRIGKEASNLKLSQ 301
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLK 154
RRA V NY V++G + + + YG+ P A +RR V ++
Sbjct: 302 RRAETVANYLVSKGQNPANVTAVGYGEANPVTGATCDAVKGRKALIACLAPDRRVEVQVQ 361
Query: 155 GCR 157
G +
Sbjct: 362 GAK 364
>gi|313886427|ref|ZP_07820146.1| OmpA family protein [Porphyromonas asaccharolytica PR426713P-I]
gi|312924108|gb|EFR34898.1| OmpA family protein [Porphyromonas asaccharolytica PR426713P-I]
Length = 647
Score = 58.3 bits (139), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 51/132 (38%), Gaps = 28/132 (21%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
+++D S+RP + L L + + + + + D GS+ + L RRA +
Sbjct: 514 HDIYYDFDRASLRPEGKKSLDYLITLLEQNPEVRLELSSNTDRKGSQAYNQKLSQRRAQS 573
Query: 109 VFNYFVARGISASRMKVTSYGKEMPS-----------------------VYGHDED---- 141
V +Y +A+GI+A R++ YGKE P V E+
Sbjct: 574 VVDYLIAKGIAADRLEARGYGKERPYVVTKGMAARFDWLPEGQELTAEWVDTLTEEQQIV 633
Query: 142 AYAKNRRAIVFL 153
NRR +
Sbjct: 634 CDQLNRRTEFTV 645
>gi|256820420|ref|YP_003141699.1| OmpA/MotB domain-containing protein [Capnocytophaga ochracea DSM
7271]
gi|256582003|gb|ACU93138.1| OmpA/MotB domain protein [Capnocytophaga ochracea DSM 7271]
Length = 290
Score = 58.3 bits (139), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 43/114 (37%), Gaps = 6/114 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSS----IA 100
++ D + F + SY+I VL + ++ +F++EGH D + + S
Sbjct: 152 INISDKMLFSSGSYTISKNAKSVLEKVAKVVKNKPDFEFMVEGHTDNVNIKTSCIRDNWD 211
Query: 101 LGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L + RA + RM +P D + A NRR + +
Sbjct: 212 LSVMRATEIVRVLQKDFGVAPERMTAAGRSYYVPLASNGDANGRALNRRTRIVI 265
>gi|187927866|ref|YP_001898353.1| OmpA/MotB domain-containing protein [Ralstonia pickettii 12J]
gi|241662454|ref|YP_002980814.1| OmpA/MotB domain-containing protein [Ralstonia pickettii 12D]
gi|187724756|gb|ACD25921.1| OmpA/MotB domain protein [Ralstonia pickettii 12J]
gi|240864481|gb|ACS62142.1| OmpA/MotB domain protein [Ralstonia pickettii 12D]
Length = 218
Score = 58.3 bits (139), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 48/121 (39%), Gaps = 9/121 (7%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FD ++P L +L S L + + +I GH D GS + L +R
Sbjct: 95 VTFAADTLFDFDKAVLKPEGKAKLDDLVSKLNGINLEVVIAVGHTDSFGSDKYNDRLSVR 154
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD--------EDAYAKNRRAIVFLKGC 156
RA AV Y V++GI A+R+ GK V NRR V + G
Sbjct: 155 RAEAVKGYLVSKGIEANRVYTEGKGKRQLKVDPKSCKGARKAQIACQQPNRRVDVEVVGT 214
Query: 157 R 157
R
Sbjct: 215 R 215
>gi|307250689|ref|ZP_07532626.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
4 str. M62]
gi|306857297|gb|EFM89416.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
4 str. M62]
Length = 368
Score = 58.3 bits (139), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 48/123 (39%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD S++PA L + + + G+ D +G S++ L
Sbjct: 242 AFSSDVLFDFGKSSLKPAAATALDAANTEIANLGLATPAIQVNGYTDRIGKEASNLKLSQ 301
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLK 154
RRA V NY V++G + + + YG+ P A +RR V ++
Sbjct: 302 RRAETVANYLVSKGQNPANVTAVGYGEANPVTGATCDAVKGRKALIACLAPDRRVEVQVQ 361
Query: 155 GCR 157
G +
Sbjct: 362 GAK 364
>gi|268679796|ref|YP_003304227.1| OmpA/MotB domain protein [Sulfurospirillum deleyianum DSM 6946]
gi|268617827|gb|ACZ12192.1| OmpA/MotB domain protein [Sulfurospirillum deleyianum DSM 6946]
Length = 266
Score = 58.3 bits (139), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/121 (16%), Positives = 40/121 (33%), Gaps = 8/121 (6%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVL---SNLGSWLEKHDCDFLIEGHADELGS---- 94
+ + + F S I +D + + + + D +++G D
Sbjct: 122 DGAIFKLPTKMLFAPGSAEITNSDSMLFLKRISDIITMLPQNVDVVVKGFTDTTPPPRGS 181
Query: 95 -RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L RA AV + GI+ R+ YG ++ KN R +
Sbjct: 182 KYQDNLELSSARANAVIRVLIRNGIAKERLSSAGYGDTKAIASNDTDEGREKNSRVEFTM 241
Query: 154 K 154
+
Sbjct: 242 R 242
>gi|37704628|gb|AAR01586.1| OprF [Pseudomonas sp. MFY72]
Length = 322
Score = 58.3 bits (139), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 48/119 (40%), Gaps = 4/119 (3%)
Query: 21 IDNLDTKISSPDTVLNES--SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ V V FD ++ + NL ++++
Sbjct: 204 CDNVDKCPDTPANVTVDANGCPAVAEVVRVQLDVKFDFDKSKVKENSYADIKNLADFMKQ 263
Query: 79 HDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSV 135
+ +EGH D +G+ + L RRA AV + V G+ R+ YG+ P
Sbjct: 264 YPSTSTTVEGHTDSVGTDAYNQKLSERRANAVRDVLVNEYGVEGGRVNAVGYGESRPVA 322
>gi|325285003|ref|YP_004260793.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
gi|324320457|gb|ADY27922.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
Length = 647
Score = 58.3 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 6/110 (5%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
D ++FD IR + + E + + H D + ++AL RRA
Sbjct: 535 DPIYFDLDKSFIRIDGQITMQQVFAYLKEYPEVVIEVRSHTDARATNEYNLALSNRRAKE 594
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGH-----DEDAYAKNRRAIVFL 153
Y + GI+ R+ +G+ + E+ + KNRR+ +
Sbjct: 595 TVKYLLDNGIAPERVSGKGFGESELTNNCDSNSKCSEEEHQKNRRSEFIV 644
>gi|148265117|ref|YP_001231823.1| OmpA/MotB domain-containing protein [Geobacter uraniireducens Rf4]
gi|146398617|gb|ABQ27250.1| OmpA/MotB domain protein [Geobacter uraniireducens Rf4]
Length = 1700
Score = 58.3 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 44/143 (30%), Gaps = 9/143 (6%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ D + + E ++ ++V + F T I + +L + +
Sbjct: 66 SVFAEDQGDRTEKRRVAEKEVKTIKLANVVPPIRFRTGEADIPDEYVALLRGVLEKMRGR 125
Query: 80 -DCDFLIEGHADELG-------SRNSSIALGLRRAYAVFNYFV-ARGISASRMKVTSYGK 130
+ GHAD + L RA Y A G+ + G+
Sbjct: 126 LNVRLHFVGHADPQSLSDPLKAKYGDNTGLSRERAGTTAEYCQRALGLPPEAISYEGVGE 185
Query: 131 EMPSVYGHDEDAYAKNRRAIVFL 153
P ED A NRR V +
Sbjct: 186 SKPVAGNATEDGRALNRRVEVEV 208
Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 7/25 (28%), Positives = 7/25 (28%)
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIV 151
G P A NRR V
Sbjct: 345 GKGASQPVASNDTTQGRAMNRRVEV 369
>gi|325277836|ref|ZP_08143389.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51]
gi|324097047|gb|EGB95340.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51]
Length = 830
Score = 58.3 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 52/135 (38%), Gaps = 12/135 (8%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSI---RPADIQVLSNLGSW--LEKHDCDFLIEG 87
L SL+ + ++ F + LS + S + +I G
Sbjct: 694 DSLRAQSLRAIETITLESDTLFAFGRADFQSLKSEGQNQLSAIASKLLNTPNIGKIVISG 753
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK-- 145
HAD+LG S++ + +RA + Y V +G+ A + G P V + A A+
Sbjct: 754 HADQLGDSQSNLQVSKQRAQTIRTYLVGKGVPAELVVAQGEGSRKPLVNCDMQQARAQLI 813
Query: 146 -----NRRAIVFLKG 155
NRR + ++G
Sbjct: 814 KCLEPNRRVEIEVRG 828
>gi|116050492|ref|YP_790689.1| hypothetical protein PA14_31620 [Pseudomonas aeruginosa UCBPP-PA14]
gi|218891473|ref|YP_002440340.1| putative ABC-type periplasmic phosphate-binding protein
[Pseudomonas aeruginosa LESB58]
gi|254235540|ref|ZP_04928863.1| hypothetical protein PACG_01464 [Pseudomonas aeruginosa C3719]
gi|115585713|gb|ABJ11728.1| putative ABC-type periplasmic phosphate-binding protein
[Pseudomonas aeruginosa UCBPP-PA14]
gi|126167471|gb|EAZ52982.1| hypothetical protein PACG_01464 [Pseudomonas aeruginosa C3719]
gi|218771699|emb|CAW27473.1| putative ABC-type periplasmic phosphate-binding protein
[Pseudomonas aeruginosa LESB58]
Length = 464
Score = 58.3 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
Query: 64 ADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
++L L + + L+ G D S+ L RA AV ARG + R
Sbjct: 377 DVQRLLDYLRQNRKLQERTVLV-GFGDPKSDAERSVLLSRLRAMAVRREL-ARGGVSFR- 433
Query: 124 KVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ +G E+P E KNRR V++
Sbjct: 434 EIAGFGDELPVASNDQELGRQKNRRVEVWV 463
>gi|254240978|ref|ZP_04934300.1| hypothetical protein PA2G_01659 [Pseudomonas aeruginosa 2192]
gi|126194356|gb|EAZ58419.1| hypothetical protein PA2G_01659 [Pseudomonas aeruginosa 2192]
Length = 464
Score = 58.3 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
Query: 64 ADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
++L L + + L+ G D S+ L RA AV ARG + R
Sbjct: 377 DVQRLLDYLRQNRKLQERTVLV-GFGDPKSDAERSVLLSRLRAMAVRREL-ARGGVSFR- 433
Query: 124 KVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ +G E+P E KNRR V++
Sbjct: 434 EIAGFGDELPVASNDQELGRQKNRRVEVWV 463
>gi|15597744|ref|NP_251238.1| hypothetical protein PA2548 [Pseudomonas aeruginosa PAO1]
gi|9948606|gb|AAG05936.1|AE004682_8 hypothetical protein PA2548 [Pseudomonas aeruginosa PAO1]
Length = 464
Score = 58.3 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/90 (26%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
Query: 64 ADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
++L L + + L+ G D S+ L RA AV ARG + R
Sbjct: 377 DVQRLLDYLRQNRKLQERTVLV-GFGDPKSDAERSVLLSRLRAMAVRREL-ARGGVSFR- 433
Query: 124 KVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ +G E+P E KNRR V++
Sbjct: 434 EIAGFGDELPVASNDQELGRQKNRRVEVWV 463
>gi|83941363|ref|ZP_00953825.1| flagellar motor protein [Sulfitobacter sp. EE-36]
gi|83847183|gb|EAP85058.1| flagellar motor protein [Sulfitobacter sp. EE-36]
Length = 582
Score = 58.3 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 43/120 (35%), Gaps = 14/120 (11%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH--------DCDFLIEGHADELG-----S 94
V F + ++ ++ + L D ++GH D
Sbjct: 460 FSSEVLFPPGAATLSADGRGEIAKVAGILRNIAADIPPEIDWVIRVDGHTDNQPLSGLGE 519
Query: 95 RNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA +V Y + GI+ R+ +G+ P G+ E A A+NRR + L
Sbjct: 520 FADNWELSQARALSVVKYMINFLGIAPERLAANGFGQYQPVARGNTEAARAQNRRIELKL 579
>gi|311695186|gb|ADP98059.1| flagellar motor protein MotD [marine bacterium HP15]
Length = 260
Score = 58.3 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 41/117 (35%), Gaps = 4/117 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
V++ + + ++ +S+ F + +V+ + + L D +EG D
Sbjct: 124 QGVVSLETSDQWLELNLPNSLLFGSGDAEPHYDAFEVVEKIATVLNNRDNAVKVEGFTDN 183
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
S+ L RA A+ V GI R+ YG+ P E+
Sbjct: 184 QPISTSRFPSNWELSAARAAAMVRMLVMEGIEPERLAAVGYGQYQPVSRNDTEEGRR 240
>gi|303250857|ref|ZP_07337050.1| major outer membrane protein [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307253079|ref|ZP_07534962.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|302650272|gb|EFL80435.1| major outer membrane protein [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306859448|gb|EFM91478.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
Length = 371
Score = 58.3 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 48/123 (39%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD S++PA L + + + G+ D +G S++ L
Sbjct: 245 AFSSDVLFDFGKSSLKPAAATALDAANTEIANLGLATPAIQVNGYTDRIGKEASNLKLSQ 304
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLK 154
RRA V NY V++G + + + YG+ P A +RR V ++
Sbjct: 305 RRAETVANYLVSKGQNPANVTAVGYGEANPVTGATCDAVKGRKALIACLAPDRRVEVQVQ 364
Query: 155 GCR 157
G +
Sbjct: 365 GAK 367
>gi|86142013|ref|ZP_01060537.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein-like [Leeuwenhoekiella blandensis MED217]
gi|85831576|gb|EAQ50032.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein-like [Leeuwenhoekiella blandensis MED217]
Length = 435
Score = 58.3 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVF 110
+ FD+ S SI+PA + + ++ ++LI GH D G ++ L RA AV
Sbjct: 331 ITFDSGSASIQPASYASIKQIAQAIQSDATGNYLITGHTDSDGDVALNMPLSESRAEAVK 390
Query: 111 NYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
V+ I +SR++ G P + A A NRR +
Sbjct: 391 AALVSEFGIDSSRLQTAGKGSSEPVSTENTVTAKALNRRVTI 432
>gi|319776072|ref|YP_004138560.1| Outer membrane protein, OmpA/MotB [Haemophilus influenzae F3047]
gi|319896881|ref|YP_004135076.1| outer membrane protein, ompa/motb [Haemophilus influenzae F3031]
gi|329123235|ref|ZP_08251803.1| lipoprotein PlpD [Haemophilus aegyptius ATCC 11116]
gi|317432385|emb|CBY80740.1| Outer membrane protein, OmpA/MotB [Haemophilus influenzae F3031]
gi|317450663|emb|CBY86883.1| Outer membrane protein, OmpA/MotB [Haemophilus influenzae F3047]
gi|327471444|gb|EGF16892.1| lipoprotein PlpD [Haemophilus aegyptius ATCC 11116]
Length = 284
Score = 58.3 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 47/118 (39%), Gaps = 9/118 (7%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRR 105
++ FD ++ +++ + L+ + I G+ D LG+ + ++ L RR
Sbjct: 145 NLSGDFLFDFDKDTLSEKGKKIIDKVSYQLKSNGAKDIKIAGYTDRLGTDSYNLELSQRR 204
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD-EDAYAK------NRRAIVFLKGC 156
A +V N+ V + +++ YGK +D A NRR + G
Sbjct: 205 ANSVKNHLV-KDGVTAQITAIGYGKNPQIKSCNDVPQGKALKDCLHPNRRVEIIASGS 261
Score = 33.6 bits (75), Expect = 9.6, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 31/90 (34%), Gaps = 1/90 (1%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPD-TVLNESSLQEQFSSSVGDSVFFDTSSY 59
M+ S I + AI+ +S G + T +P+ +N + + + + F
Sbjct: 1 MKLSRILLSTIAISALSACGNLSKVTDAGTPEYKNINGEQVPQLVWPKIDSATFNHDGRQ 60
Query: 60 SIRPADIQVLSNLGSWLEKHDCDFLIEGHA 89
+ L + S + K LI
Sbjct: 61 FGSWPNWDNLRMIESGMNKDQIRQLIGNPH 90
>gi|270723293|ref|ZP_06223417.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
gi|270315265|gb|EFA27588.1| conserved hypothetical protein [Haemophilus influenzae HK1212]
Length = 149
Score = 58.3 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 47/118 (39%), Gaps = 9/118 (7%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRR 105
++ FD ++ +++ + L+ + I G+ D LG+ + ++ L RR
Sbjct: 30 NLSGDFLFDFDKDTLSEKGKKIIDKVSYQLKSNGAKDIKIAGYTDRLGTDSYNLELSQRR 89
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD-EDAYAK------NRRAIVFLKGC 156
A +V N+ V + +++ YGK +D A NRR + G
Sbjct: 90 ANSVKNHLV-KDGVTAQITAIGYGKNPQIKSCNDVPQGKALKDCLHPNRRVEIIASGS 146
>gi|83954511|ref|ZP_00963222.1| OmpA family protein [Sulfitobacter sp. NAS-14.1]
gi|83840795|gb|EAP79966.1| OmpA family protein [Sulfitobacter sp. NAS-14.1]
Length = 234
Score = 58.3 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 4/119 (3%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNS 97
L +F+ V +V F +S + A VL W+ + F + GH D +GS +
Sbjct: 75 DLANRFAGEVESTVTFAFNSAQLDGAAQAVLRRQAGWIRQFPEVRFRVYGHTDAVGSNSY 134
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVT-SYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+ ALGLRRA +V + +GIS SR++ S+G+ P + + NRR + + G
Sbjct: 135 NKALGLRRAQSVVGFLSTQGISRSRLEAVVSFGETQPLIVTQGRE--RANRRTVTEVSG 191
>gi|309781036|ref|ZP_07675774.1| outer membrane protein A [Ralstonia sp. 5_7_47FAA]
gi|308920102|gb|EFP65761.1| outer membrane protein A [Ralstonia sp. 5_7_47FAA]
Length = 218
Score = 58.3 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/121 (28%), Positives = 48/121 (39%), Gaps = 9/121 (7%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FD ++P L +L S L + + +I GH D GS + L +R
Sbjct: 95 VTFAADTLFDFDKAVLKPEGKAKLDDLISKLNGINLEVVIAVGHTDSFGSDKYNDRLSVR 154
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD--------EDAYAKNRRAIVFLKGC 156
RA AV Y V++GI A+R+ GK V NRR V + G
Sbjct: 155 RAEAVKGYLVSKGIEANRVYTEGKGKRQLKVDPKSCKGARKAQIACQQPNRRVDVEVVGT 214
Query: 157 R 157
R
Sbjct: 215 R 215
>gi|251771621|gb|EES52197.1| outer membrane protein, OmpA/MotB family [Leptospirillum
ferrodiazotrophum]
Length = 186
Score = 58.3 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/142 (27%), Positives = 63/142 (44%), Gaps = 5/142 (3%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS 70
SA T + + D ++ ++ ++ + + F + D +L
Sbjct: 36 SASTTNAAANTPATDNSAATDNSAATAAAQAASEMDPLKKDIQFGFDKSLLSSEDRGILK 95
Query: 71 NLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
S L+ H +I GHADE G+ +I LG +RA A Y + G+SA R+K+ SYG
Sbjct: 96 KDASILKAHPSVKVVIAGHADERGTDAYNIVLGQKRAKAARIYLIRLGVSAKRIKIVSYG 155
Query: 130 KEM-P---SVYGHDEDAYAKNR 147
K P H+E ++KNR
Sbjct: 156 KREIPNYSVCSDHNESCWSKNR 177
>gi|212637766|ref|YP_002314291.1| OmpA protein [Shewanella piezotolerans WP3]
gi|212559250|gb|ACJ31704.1| OmpA [Shewanella piezotolerans WP3]
Length = 301
Score = 58.3 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 2/123 (1%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE--KHDCDFLIEGHADELGSRNS 97
L + FS + FDTSS + + L + ++E + LI+GHAD G+R +
Sbjct: 169 LPKPFSYVRRLDLLFDTSSSHLNTVHSKDLVAVSRYIEADSTIAEVLIDGHADASGNRIA 228
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
++ L RA V + + G+ A ++V +G P +++ NRR + L
Sbjct: 229 NLVLSKERADEVASMLIELGVPARMIQVRHHGTRAPIAANNNQQGRELNRRVSIRLVKTS 288
Query: 158 ANT 160
A T
Sbjct: 289 AQT 291
>gi|254449145|ref|ZP_05062596.1| OmpA family protein [gamma proteobacterium HTCC5015]
gi|198261259|gb|EDY85553.1| OmpA family protein [gamma proteobacterium HTCC5015]
Length = 397
Score = 58.3 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 41/130 (31%), Gaps = 3/130 (2%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI 85
N + + + F A V + + ++
Sbjct: 270 EVGVDSRAPSNYKATVQGAERLSLNFRFKPREYQLDNKALQDVDRLVDFLQKNPQYKVVL 329
Query: 86 EGHADE-LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
G +D + S L + R+ V N + +GI S V +G + H E
Sbjct: 330 AGFSDAAEEAAWRSYILSMERSDFVANQLIKKGIVPS--VVRGFGSTLQVASNHSEKGRD 387
Query: 145 KNRRAIVFLK 154
KNRR V+++
Sbjct: 388 KNRRVEVWVR 397
>gi|327313465|ref|YP_004328902.1| OmpA family protein [Prevotella denticola F0289]
gi|326946064|gb|AEA21949.1| OmpA family protein [Prevotella denticola F0289]
Length = 697
Score = 58.3 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 46/132 (34%), Gaps = 28/132 (21%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
D++F+D ++RP + L+ L E + + H D +GS + L RRA A
Sbjct: 529 DNIFYDFDKATLRPESEKALNELVKLLEENPNVTIELSAHTDYIGSAEYNKRLSQRRADA 588
Query: 109 VFNYFVARGISASRMKVTSYGKEMP---------------------------SVYGHDED 141
V Y + GI R+ YGKE P E
Sbjct: 589 VVAYLTSHGIVRDRLTPVGYGKERPKKIRRKLTEKYPWLKENDILTEDFIKKLDKEKQEI 648
Query: 142 AYAKNRRAIVFL 153
A NRR +
Sbjct: 649 ANQLNRRTEFTV 660
>gi|325860329|ref|ZP_08173451.1| OmpA family protein [Prevotella denticola CRIS 18C-A]
gi|325482208|gb|EGC85219.1| OmpA family protein [Prevotella denticola CRIS 18C-A]
Length = 697
Score = 58.3 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 46/132 (34%), Gaps = 28/132 (21%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
D++F+D ++RP + L+ L E + + H D +GS + L RRA A
Sbjct: 529 DNIFYDFDKATLRPESEKALNELVKLLEENPNVTIELSAHTDYIGSAEYNKRLSQRRADA 588
Query: 109 VFNYFVARGISASRMKVTSYGKEMP---------------------------SVYGHDED 141
V Y + GI R+ YGKE P E
Sbjct: 589 VVAYLTSHGIVRDRLTPVGYGKERPKKIRRKLTEKYPWLKENDILTEDFIKKLDKEKQEI 648
Query: 142 AYAKNRRAIVFL 153
A NRR +
Sbjct: 649 ANQLNRRTEFTV 660
>gi|207092500|ref|ZP_03240287.1| flagellar motor protein MotB [Helicobacter pylori HPKX_438_AG0C1]
Length = 260
Score = 58.3 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/152 (17%), Positives = 51/152 (33%), Gaps = 7/152 (4%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS-SYSIRPADIQV 68
+++ + S I+ + + + S+ F+ + S +I +
Sbjct: 82 MASESSKPASQNTETKATIARKGEGSVLEQIDQGSILKLPSSLLFENATSDAINQDMMLY 141
Query: 69 LSNLGSWLEKHDCDFLIE--GHADELG----SRNSSIALGLRRAYAVFNYFVARGISASR 122
L + ++K I G D+ S L RAY V + G+ ++
Sbjct: 142 LERIAKIIQKLPKRVHINVRGFTDDTPLVKTRFKSHYELAANRAYRVMKVLIQYGVDPNQ 201
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ +SYG P + KN R +F
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEIFFS 233
>gi|152968039|ref|YP_001363823.1| OmpA/MotB domain protein [Kineococcus radiotolerans SRS30216]
gi|151362556|gb|ABS05559.1| OmpA/MotB domain protein [Kineococcus radiotolerans SRS30216]
Length = 180
Score = 58.3 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/176 (18%), Positives = 59/176 (33%), Gaps = 30/176 (17%)
Query: 8 IILSAITMMSISGIDNLDTKI----------------------SSPDTVLNESSLQEQFS 45
+ L+ I +++ + + P + E S
Sbjct: 5 LALAGILLLTATPSPAPSVQPWVGDPADGPAGRVLAVAPRVLDVGPRVEDVVQPVPEGES 64
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNSSIALGLR 104
+VG V F S + + L+ + H +EGH D +G ++ +L R
Sbjct: 65 ITVGADVLFAFGSADLPASAAGQLAGIGARIGRGHPTAIRVEGHTDGIGDDAANQSLSER 124
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYG------HDEDAYAKNRRAIVFLK 154
RA AV ++ + ++ +G+ P D A A NRR V L+
Sbjct: 125 RAAAVAAA-LSAAAAGVPVQQEGFGETRPLRPETTASGEDDPAARAANRRVTVVLR 179
>gi|302338591|ref|YP_003803797.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293]
gi|301635776|gb|ADK81203.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293]
Length = 1410
Score = 58.3 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 39/122 (31%), Gaps = 12/122 (9%)
Query: 36 NESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR 95
E + + ++ + SY I L N ++ E +
Sbjct: 1301 PEVAERNRYVLDRLAEILQKYRSYQIMVEGHAALINWADPVKA------------EREEQ 1348
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+ L RA V V RGI +R+ G P V D + KNRR L+
Sbjct: 1349 TELMPLSQARAEKVVEALVERGIDRNRLDAVGVGGTKPLVPHSDIENRWKNRRVEFILEK 1408
Query: 156 CR 157
R
Sbjct: 1409 KR 1410
>gi|254486323|ref|ZP_05099528.1| OmpA/MotB [Roseobacter sp. GAI101]
gi|214043192|gb|EEB83830.1| OmpA/MotB [Roseobacter sp. GAI101]
Length = 231
Score = 57.9 bits (138), Expect = 4e-07, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 4/138 (2%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
G L+ ++ L +F+ V +V FD +S + A +L +W+ +
Sbjct: 55 GDATLNNRLVMTGERQYTFDLANRFAGEVQSTVTFDFNSSQLDAAAQAILRQQANWIRQF 114
Query: 80 D-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT-SYGKEMPSVYG 137
F + GH D +GS S+ ALGLRRA +V + +GIS SR++ S+G+ P +
Sbjct: 115 PEVRFRVYGHTDAVGSNRSNKALGLRRARSVVAFLTTQGISTSRLEAVVSFGETQPLIVT 174
Query: 138 HDEDAYAKNRRAIVFLKG 155
+ NRR + + G
Sbjct: 175 QGRE--RANRRTVTEVSG 190
>gi|126208885|ref|YP_001054110.1| outer membrane protein P5 precursor [Actinobacillus
pleuropneumoniae L20]
gi|126097677|gb|ABN74505.1| outer membrane protein P5 precursor [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
Length = 368
Score = 57.9 bits (138), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 48/123 (39%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD S++PA L + + + G+ D +G S++ L
Sbjct: 242 AFSSDVLFDFGKSSLKPAAATALDAANTEIANLGLATPAIQVNGYTDRIGKEASNLKLSQ 301
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLK 154
RRA V NY V++G + + + YG+ P A +RR V ++
Sbjct: 302 RRAETVANYLVSKGQNPANVTAVGYGEANPVTGATCDAVKGRKALIACLAPDRRVEVQVQ 361
Query: 155 GCR 157
G +
Sbjct: 362 GAK 364
>gi|146307460|ref|YP_001187925.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp]
gi|145575661|gb|ABP85193.1| phosphate ABC transporter substrate-binding protein, PhoT family
[Pseudomonas mendocina ymp]
Length = 460
Score = 57.9 bits (138), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 51/146 (34%), Gaps = 8/146 (5%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD-SVFFDT--SSYSIRPADIQVLS 70
++ +G + + Q + SV F S ++ + L
Sbjct: 316 AIVDSTGFIAQTVQAVQVAPDAQLPADYRQLAEQAQRLSVNFRFQEGSATLDNKAQRDLQ 375
Query: 71 NLGSWLEKH---DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
+ +L +H ++ G D + L RA AV +G+ +VT
Sbjct: 376 RVMDYLRQHDKLQGKVVLVGFGDAKSDPERAELLSKLRAMAVRRELARQGVLFR--EVTG 433
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFL 153
G E+P ++E +NRR V++
Sbjct: 434 LGGELPVAANNEEHGRIRNRRVEVWV 459
>gi|28898409|ref|NP_798014.1| putative outer membrane protein [Vibrio parahaemolyticus RIMD
2210633]
gi|260895070|ref|ZP_05903566.1| outer membrane protein [Vibrio parahaemolyticus Peru-466]
gi|260900920|ref|ZP_05909315.1| outer membrane protein [Vibrio parahaemolyticus AQ4037]
gi|308094379|ref|ZP_05888926.2| outer membrane protein [Vibrio parahaemolyticus AN-5034]
gi|28806626|dbj|BAC59898.1| putative outer membrane protein [Vibrio parahaemolyticus RIMD
2210633]
gi|308086027|gb|EFO35722.1| outer membrane protein [Vibrio parahaemolyticus Peru-466]
gi|308093578|gb|EFO43273.1| outer membrane protein [Vibrio parahaemolyticus AN-5034]
gi|308110719|gb|EFO48259.1| outer membrane protein [Vibrio parahaemolyticus AQ4037]
Length = 206
Score = 57.9 bits (138), Expect = 4e-07, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 68/189 (35%), Gaps = 31/189 (16%)
Query: 1 MQYSTIFIILSAITMMSIS-------------GIDNLDTKISSPDTVLNESSLQEQF--- 44
M+ + + LS I + + D + D V+N L
Sbjct: 1 MKPMKLLLALSVIAVTQQAIAEDEYDYRAFPTAEQIADLQDEDNDGVINARDLCPGTPAG 60
Query: 45 --------------SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHA 89
S + V F S I P + + L +L+ + ++G+A
Sbjct: 61 SEVDNDGCGEYIKASEKMQVRVLFANDSDEINPVFRRQIRELSDFLKDYPTTSIELQGYA 120
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
+ G + L RRA V + ++ GI +R+++ +G + G D+ ++A NRR
Sbjct: 121 SKTGGSKHNQDLSERRAKNVRDALLSYGIEPNRVRIIGFGDTHLAEQGTDQVSHALNRRV 180
Query: 150 IVFLKGCRA 158
+ G +
Sbjct: 181 TASVVGYKG 189
>gi|332534626|ref|ZP_08410458.1| putative component of sodium-driven polar flagellar motor
[Pseudoalteromonas haloplanktis ANT/505]
gi|332035906|gb|EGI72387.1| putative component of sodium-driven polar flagellar motor
[Pseudoalteromonas haloplanktis ANT/505]
Length = 292
Score = 57.9 bits (138), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNSSIALGLRRAYAVFN 111
+ ++S + + Q L + +L+ I+ + D G R +++ L +RA + +
Sbjct: 188 YQSNSSKLTKSSQQRLDKIAEYLKNDASIESISIDSYTDSYGGRWNNLDLSRKRAKTIKD 247
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
Y V+ G+ ++++ T G++ + KNRR I+ ++
Sbjct: 248 YMVSLGVDEAKVQTTGLGEKRFVDNNDNILGRDKNRRLIIQIE 290
>gi|110680553|ref|YP_683560.1| hypothetical protein RD1_3382 [Roseobacter denitrificans OCh 114]
gi|109456669|gb|ABG32874.1| conserved hypothetical protein [Roseobacter denitrificans OCh 114]
Length = 659
Score = 57.9 bits (138), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 42/125 (33%), Gaps = 14/125 (11%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW--------LEKHDCDFLIEGHADELG 93
E V F+ + + + ++ + + D ++GH D L
Sbjct: 531 EGDRFVFSSEVLFEPARADLSSEGQEEIAKVARILSSVADEIPPEIDWIIRVDGHTDNLP 590
Query: 94 -----SRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+ L RA +V Y GI +R+ +G+ P +A A+NR
Sbjct: 591 LSGVGQFADNWELSQGRALSVVKYMVDTLGIPPNRLAANGFGEFQPVAVEDTPEARAQNR 650
Query: 148 RAIVF 152
R +
Sbjct: 651 RIELK 655
>gi|317182128|dbj|BAJ59912.1| flagellar motor protein MotB [Helicobacter pylori F57]
Length = 255
Score = 57.9 bits (138), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/152 (15%), Positives = 52/152 (34%), Gaps = 7/152 (4%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS-SYSIRPADIQV 68
+++ + S I+ + + + ++ F+ + S +I +
Sbjct: 82 MASESSKPASQNTETKATIARKGEGSVLEQIDQGSILKLPSNLLFENATSDAINQDMMLY 141
Query: 69 LSNLGSWLEKHDCDFLIE--GHADELG----SRNSSIALGLRRAYAVFNYFVARGISASR 122
+ + ++K I G D+ S L RAY V + G++ ++
Sbjct: 142 IERIAKIIQKLPKRVHINVRGFTDDTPLIKTRFKSHYELAANRAYRVMKVLMQYGVNPNQ 201
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ +SYG P + KN R +F
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEIFFS 233
>gi|317012627|gb|ADU83235.1| flagellar motor protein MotB [Helicobacter pylori Lithuania75]
Length = 257
Score = 57.9 bits (138), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/152 (15%), Positives = 52/152 (34%), Gaps = 7/152 (4%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS-SYSIRPADIQV 68
+++ + S I+ + + + ++ F+ + S +I +
Sbjct: 82 MASESSKPASQNTETKATIARKGEGSVLEQIDQGSILKLPSNLLFENATSDTINQDMMLY 141
Query: 69 LSNLGSWLEKHDCDFLIE--GHADELG----SRNSSIALGLRRAYAVFNYFVARGISASR 122
+ + ++K I G D+ S L RAY V + G++ ++
Sbjct: 142 IERIAKIIQKLPKRVHINVRGFTDDTPLVKTRFKSHYELAANRAYRVMKVLIQYGVNPNQ 201
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ +SYG P + KN R +F
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEIFFS 233
>gi|311696932|gb|ADP99805.1| OmpA/MotB domain protein [marine bacterium HP15]
Length = 341
Score = 57.9 bits (138), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
Query: 73 GSWLEKHDCDFLIEGHAD----ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
E D I+GH D S+ L RA AV Y A+G+ RM +
Sbjct: 254 AKIPEDVDWILRIDGHTDVIPINTPRFPSNWELSTARAVAVVRYLAAQGVPERRMAAAGF 313
Query: 129 GKEMPSVYGHDEDAYAKNRRAIVFL 153
G+ P G +A +NRR + L
Sbjct: 314 GEFFPVAEGTSPEALQRNRRIELKL 338
>gi|70728662|ref|YP_258411.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
gi|68342961|gb|AAY90567.1| OmpA family protein [Pseudomonas fluorescens Pf-5]
Length = 418
Score = 57.9 bits (138), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 29/71 (40%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
LI GHAD G ++ L RA +V F G+ R+ + G MP
Sbjct: 270 VLILGHADATGPTLANQKLSRDRAQSVAAIFSLSGLKQDRLMLRGMGSVMPRAANDSPQG 329
Query: 143 YAKNRRAIVFL 153
+ NRR + L
Sbjct: 330 RSLNRRVEIML 340
>gi|331007308|ref|ZP_08330507.1| Flagellar motor rotation protein MotB [gamma proteobacterium
IMCC1989]
gi|330418870|gb|EGG93337.1| Flagellar motor rotation protein MotB [gamma proteobacterium
IMCC1989]
Length = 434
Score = 57.9 bits (138), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 52/140 (37%), Gaps = 8/140 (5%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
D + ++SS + L + + D++ F + S S+ + LS + L +
Sbjct: 272 DKTNAELSSEKSRLVQQFKDGTTLIRLEDTILFSSGSASLNARGQKTLSLVADTLAEFPN 331
Query: 82 D-FLIEGHADELGS-------RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
IEGH D ++ L RA + + +G+ A + + + P
Sbjct: 332 HLISIEGHTDHRPIVSTLAEKYPTNWELSAARASFAIRHLMEKGLPAKQFQAVGFANTRP 391
Query: 134 SVYGHDEDAYAKNRRAIVFL 153
D + KNRR + L
Sbjct: 392 IAMDVDYASQKKNRRIEILL 411
>gi|325525950|gb|EGD03642.1| putative OmpA/MotB family outer membrane protein [Burkholderia sp.
TJI49]
Length = 405
Score = 57.9 bits (138), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
Query: 83 FLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ G+AD + + S+ AL RA V VA GI A ++V G
Sbjct: 329 VRVVGYADSAPAGSARQVSNQALSEARAENVARILVAAGIPAHGLRVEGRGDADALADNG 388
Query: 139 DEDAYAKNRRAIVFL 153
E A+NRR V +
Sbjct: 389 TESGRARNRRVEVIV 403
>gi|261837954|gb|ACX97720.1| flagellar motor rotation protein [Helicobacter pylori 51]
Length = 255
Score = 57.9 bits (138), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/152 (15%), Positives = 52/152 (34%), Gaps = 7/152 (4%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS-SYSIRPADIQV 68
+++ + S I+ + + + ++ F+ + S +I +
Sbjct: 82 MASESSKPASQNTETKATIARKGEGSVLEQIDQGSILKLPSNLLFENATSDAINQDMMLY 141
Query: 69 LSNLGSWLEKHDCDFLIE--GHADELG----SRNSSIALGLRRAYAVFNYFVARGISASR 122
+ + ++K I G D+ S L RAY V + G++ ++
Sbjct: 142 IERIAKIIQKLPKRVHINVRGFTDDTPLAKTRFKSHYELAANRAYRVMKVLMQYGVNPNQ 201
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ +SYG P + KN R +F
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEIFFS 233
>gi|162145880|ref|YP_001600338.1| outer membrane protein [Gluconacetobacter diazotrophicus PAl 5]
gi|209543812|ref|YP_002276041.1| OmpA/MotB domain-containing protein [Gluconacetobacter
diazotrophicus PAl 5]
gi|161784454|emb|CAP53984.1| Outer membrane protein [Gluconacetobacter diazotrophicus PAl 5]
gi|209531489|gb|ACI51426.1| OmpA/MotB domain protein [Gluconacetobacter diazotrophicus PAl 5]
Length = 380
Score = 57.9 bits (138), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 41/109 (37%), Gaps = 7/109 (6%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRN------SSIALGLR 104
VFFD + +++ ++G+ D + ++AL +R
Sbjct: 271 VFFDWDQAVLTDRARAIVATAAQASTRTQTTRIEVDGYTDNSAAHPGPRGARYNMALSVR 330
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA AV + G+ + + V +G+ P V +NRR + L
Sbjct: 331 RAQAVQAELIRDGVPGTAIDVHGFGETHPLVATGPNTREPQNRRVEIIL 379
>gi|329894132|ref|ZP_08270117.1| OmpA/MotB domain protein [gamma proteobacterium IMCC3088]
gi|328923304|gb|EGG30624.1| OmpA/MotB domain protein [gamma proteobacterium IMCC3088]
Length = 228
Score = 57.9 bits (138), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 49/120 (40%), Gaps = 1/120 (0%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVL-SNLGSWLEKHDCDFLIEGHADELGSRN 96
++ E+ + +V F T S + P Q L + + + + G+AD G
Sbjct: 102 AASMERSRLELAMNVQFRTGSSELEPLYQQSLENMVELLKKDSSLQVTLSGYADRRGDEA 161
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
+ L +R AV F GI +R+K +G+ P D +A +RR + + G
Sbjct: 162 FNEQLSAQRVAAVQQVFRNGGIHLNRIKTREFGERSPVDPTVSMDGHAFDRRVAIEVSGS 221
>gi|262173379|ref|ZP_06041056.1| putative sodium-type flagellar protein MotY precursor [Vibrio
mimicus MB-451]
gi|261890737|gb|EEY36724.1| putative sodium-type flagellar protein MotY precursor [Vibrio
mimicus MB-451]
Length = 345
Score = 57.9 bits (138), Expect = 4e-07, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 44/104 (42%), Gaps = 2/104 (1%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
++F ++ L L ++ + L++G+ D +G +++ + +R+ +
Sbjct: 218 IYFAFGQRTLSNEQKMRLRALYRYIVEDSRVNKVLVDGYTDNVGPSVANLTISRQRSELI 277
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G++ +++V ++G P AKNRR + L
Sbjct: 278 AKELNRLGLAEEKVEVRAHGLRYPVASNDTAAGQAKNRRVTLRL 321
>gi|325286203|ref|YP_004261993.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
gi|324321657|gb|ADY29122.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
Length = 276
Score = 57.9 bits (138), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/116 (18%), Positives = 45/116 (38%), Gaps = 6/116 (5%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNS----S 98
S+ D + F+T+SY++ +L L + + ++EGH D +
Sbjct: 146 VMISISDKLLFNTASYNVSNKADAILQKLADVINSEPSIEVMVEGHTDSRSISTPKVTDN 205
Query: 99 IALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L + RA ++ + ++ + +P ++ AKNRR + +
Sbjct: 206 WDLSVLRATSIVRKLQTKYNVAPEKLIASGRSSYVPLASNDTKEDRAKNRRTRIVI 261
>gi|213022384|ref|ZP_03336831.1| hypothetical protein Salmonelentericaenterica_06936 [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 62
Score = 57.9 bits (138), Expect = 4e-07, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 21/58 (36%)
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ + V + G+ A R+ + G +P + AKNRR + +
Sbjct: 3 HPTWCYRKNGTAEVAALLTSGGVPAGRVHIVGKGDTVPVADNGSKAGRAKNRRVEILV 60
>gi|297380015|gb|ADI34902.1| flagellar motor protein MotB [Helicobacter pylori v225d]
Length = 255
Score = 57.9 bits (138), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/152 (15%), Positives = 52/152 (34%), Gaps = 7/152 (4%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS-SYSIRPADIQV 68
+++ + S I+ + + + ++ F+ + S +I +
Sbjct: 82 MASESSKPASQNTETKATIARKGEGSVLEQIDQGSILKLPSNLLFENATSDTINQDMMLY 141
Query: 69 LSNLGSWLEKHDCDFLIE--GHADELG----SRNSSIALGLRRAYAVFNYFVARGISASR 122
+ + ++K I G D+ S L RAY V + G++ ++
Sbjct: 142 IERIAKIIQKLPKRVHINVRGFTDDTPLIKTRFKSHYELAANRAYRVMKVLIQYGVNPNQ 201
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ +SYG P + KN R +F
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEIFFS 233
>gi|256824209|ref|YP_003148169.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Kytococcus sedentarius DSM 20547]
gi|256687602|gb|ACV05404.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Kytococcus sedentarius DSM 20547]
Length = 437
Score = 57.9 bits (138), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 54/135 (40%), Gaps = 1/135 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+D ++ + + +++ S + F +SS ++ + +G L
Sbjct: 304 SVDPGLAAVNKIEDLTCKNAPASMKGISAAYPMRFPSSSDALYGESAVNAARIGEKLAGC 363
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
D D ++ GH D +G + L RA + V G+ R++ ++ P
Sbjct: 364 DFDVVVVGHTDSVG-GEVNERLSAFRAEKIAQALVVAGVDFDRIQQSNASASQPIASNET 422
Query: 140 EDAYAKNRRAIVFLK 154
ED AKNRR + +K
Sbjct: 423 EDGRAKNRRVEILVK 437
>gi|213420068|ref|ZP_03353134.1| hypothetical protein Salmonentericaenterica_20830 [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 64
Score = 57.9 bits (138), Expect = 4e-07, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 21/58 (36%)
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ + + + G+ A R+ + G +P + AKNRR + +
Sbjct: 5 HPTWCYRKNGRRKLRRCLTSGGVPAGRVHIVGKGDTVPVADNGSKAGRAKNRRVEILV 62
>gi|308182972|ref|YP_003927099.1| flagellar motor protein MotB [Helicobacter pylori PeCan4]
gi|308065157|gb|ADO07049.1| flagellar motor protein MotB [Helicobacter pylori PeCan4]
Length = 255
Score = 57.9 bits (138), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/152 (15%), Positives = 52/152 (34%), Gaps = 7/152 (4%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS-SYSIRPADIQV 68
+++ + S I+ + + + ++ F+ + S +I +
Sbjct: 82 MASESSKPASQNTETKATIARKGEGSVLEQIDQGSILKLPSNLLFENATSDTINQDMMLY 141
Query: 69 LSNLGSWLEKHDCDFLIE--GHADELG----SRNSSIALGLRRAYAVFNYFVARGISASR 122
+ + ++K I G D+ S L RAY V + G++ ++
Sbjct: 142 IERIAKIIQKLPKRVHINVRGFTDDTPLDKTRFKSHYELAANRAYRVMKVLIQYGVNPNQ 201
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ +SYG P + KN R +F
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEIFFS 233
>gi|225569968|ref|ZP_03778993.1| hypothetical protein CLOHYLEM_06063 [Clostridium hylemonae DSM
15053]
gi|225161438|gb|EEG74057.1| hypothetical protein CLOHYLEM_06063 [Clostridium hylemonae DSM
15053]
Length = 255
Score = 57.9 bits (138), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 41/122 (33%), Gaps = 9/122 (7%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSN---LGSWLEKHDCDFLIEGHADELGSRNS 97
+ D+VFFD SY +R VL + + + + GH +
Sbjct: 111 DGYQFITFKDNVFFDGDSYVLRDEGKSVLDTFSSVIAPASDAIKEIQVLGHTSQAEPNIP 170
Query: 98 SIALGLRRAYA------VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ + R A V I A ++ YG+ P + A+NRR +
Sbjct: 171 NEVMTDRVLSATRSAVVVAYVQQKNIIEAKKLVSAGYGQFRPIDTFDTFEGRARNRRVEI 230
Query: 152 FL 153
+
Sbjct: 231 LI 232
>gi|187735188|ref|YP_001877300.1| OmpA/MotB domain protein [Akkermansia muciniphila ATCC BAA-835]
gi|187425240|gb|ACD04519.1| OmpA/MotB domain protein [Akkermansia muciniphila ATCC BAA-835]
Length = 439
Score = 57.9 bits (138), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 8/111 (7%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAV 109
++FF + ++ + L + ++ I GH D++GS + L RRA AV
Sbjct: 327 ALFFGFNEDTLSKRSERQLQIVAEAIKMDSGKKLEISGHTDDVGSERYNQGLSERRAAAV 386
Query: 110 FNYFVARGISASRMKVTSYGKEMPS------VYGHD-EDAYAKNRRAIVFL 153
V G+ A R+ +GK P ++A +NRRA ++L
Sbjct: 387 KAQLVQFGVPAERIVTKGFGKSQPRRTYSPTADEETRDEARKENRRAEMYL 437
>gi|262394300|ref|YP_003286154.1| outer membrane protein [Vibrio sp. Ex25]
gi|262337894|gb|ACY51689.1| outer membrane protein [Vibrio sp. Ex25]
Length = 272
Score = 57.9 bits (138), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 53/141 (37%), Gaps = 1/141 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
T + + ++ ++ + + + F S I P + L+ L H
Sbjct: 118 SQTTCTPPDDIEALRSDLNVVAEIYALLNIDNQFAVDSAEINPKYMGHLAEAAYILRDHP 177
Query: 81 -CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
++ GHAD G+ + + L RA V Y GI++ R+ S G +P G
Sbjct: 178 NLTLVVTGHADVTGAPDYNQKLAQARAEQVKRYLTVFGITSERVTTKSVGDSLPLYEGET 237
Query: 140 EDAYAKNRRAIVFLKGCRANT 160
NRR + + +++
Sbjct: 238 PAVRLTNRRVSIEVISPNSDS 258
>gi|218709383|ref|YP_002417004.1| putative outer membrane protein [Vibrio splendidus LGP32]
gi|218322402|emb|CAV18555.1| putative outer membrane protein [Vibrio splendidus LGP32]
Length = 204
Score = 57.9 bits (138), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVF 110
+ F S I+P + + + ++L++++ ++G+A ++G+ ++ L RA V
Sbjct: 84 ILFANDSAEIKPVFLSQIRQMAAFLKRYENTSIQLQGYASKVGNAEYNLKLSEERAVNVR 143
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
++ GI SR+ YG E +A NR+ + + G + N
Sbjct: 144 RALISNGIPPSRVYTVGYGDAGFL-DNDTETNHALNRKVVASVVGFKGN 191
>gi|254429094|ref|ZP_05042801.1| OmpA family protein [Alcanivorax sp. DG881]
gi|196195263|gb|EDX90222.1| OmpA family protein [Alcanivorax sp. DG881]
Length = 203
Score = 57.9 bits (138), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/172 (17%), Positives = 57/172 (33%), Gaps = 21/172 (12%)
Query: 1 MQYSTIFIILSAITMMSISGIDNL------DTKISSPDTVLNESSLQEQFSSSVGD---- 50
M+ +IL+ +T M+ + ++ G
Sbjct: 1 MKARFALLILAGMTTMAGCASTESLYAQYDELCPVEARVTSTGLVTVTGIAAGGGAGLVA 60
Query: 51 ----------SVFFDTSSYSI-RPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSI 99
+V+F + ++ SNL + ++ DE G+ + +
Sbjct: 61 GESRTQVWEPAVYFGFDQNELADAEARRLESNLAVLKQYPTLQVSVQAFTDEKGAASYNQ 120
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
L RR V Y GIS R+K + G+E+P + + + NRR +
Sbjct: 121 KLAARRLDRVVQYLRDGGISNGRIKRVALGEELPILPDANNEQRVINRRVEL 172
>gi|315223432|ref|ZP_07865289.1| OmpA family protein [Capnocytophaga ochracea F0287]
gi|314946605|gb|EFS98596.1| OmpA family protein [Capnocytophaga ochracea F0287]
Length = 290
Score = 57.9 bits (138), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 43/114 (37%), Gaps = 6/114 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSS----IA 100
++ D + F + SY+I VL + ++ +F++EGH D + + S
Sbjct: 152 INISDKMLFSSGSYTISKNAKSVLEKVAKVVKNKPDFEFMVEGHTDNVNIKTSCIRDNWD 211
Query: 101 LGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L + RA + RM +P D + A NRR + +
Sbjct: 212 LSVMRATEIVRVLQKDFGVAPERMTAAGRSYYVPLASNGDANGRALNRRTRIVV 265
>gi|302346547|ref|YP_003814845.1| OmpA family protein [Prevotella melaninogenica ATCC 25845]
gi|302150388|gb|ADK96649.1| OmpA family protein [Prevotella melaninogenica ATCC 25845]
Length = 653
Score = 57.9 bits (138), Expect = 4e-07, Method: Composition-based stats.
Identities = 38/174 (21%), Positives = 60/174 (34%), Gaps = 33/174 (18%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG-----DSVFFDTSSYSIRPADIQ 67
I + + +G N +I + ++ + + D++F+D ++RP +
Sbjct: 443 IFLATCNGYLNHKEEIKVGNVDDSKVYTLQFALPGINVPVLIDNIFYDFDKATLRPESEK 502
Query: 68 VLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT 126
L L + E + + H D LGS + + L RRA AV Y A GI R+
Sbjct: 503 ALDALVNLLKENPNVTIELSAHTDYLGSADYNKRLSQRRADAVVAYLTAHGIVRDRLTPV 562
Query: 127 SYGKEMP---------------------------SVYGHDEDAYAKNRRAIVFL 153
YGKE P E A NRR +
Sbjct: 563 GYGKERPKKIRKKVTEKYPWLKENDVLTEDFIKKLDKEKQEIANQLNRRTEFTV 616
>gi|189179677|dbj|BAG39458.1| outer membrane protein [Gluconacetobacter intermedius]
Length = 364
Score = 57.9 bits (138), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 43/109 (39%), Gaps = 7/109 (6%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRN------SSIALGLR 104
VFFD ++ ++++ + G+ D + ++ L +R
Sbjct: 255 VFFDWDGAALTGRSREIVAEAAQASTHVQTTRIEVNGYTDNTSAHPGPRGEKYNLGLSMR 314
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA +V + G+ A+ + V YG+ P V + +NRR + L
Sbjct: 315 RADSVKAELIRDGVPANAIDVHGYGEAHPLVPTGPDTREPQNRRVEIIL 363
>gi|54307256|ref|YP_128276.1| hypothetical protein PBPRA0019 [Photobacterium profundum SS9]
gi|46911676|emb|CAG18474.1| conserved hypothetical protein [Photobacterium profundum SS9]
Length = 290
Score = 57.9 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 43/103 (41%), Gaps = 2/103 (1%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNSSIALGLRRAYAVF 110
++ + S + D++ + +++ LI+G++D G ++ + RA V
Sbjct: 180 YYPSGSTLVSKLDVRTAYGIAEYVKVIRSIKKVLIDGYSDSQGRSTVNLRISRERAEEVA 239
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ G+ +++ S+G P D KNRR V L
Sbjct: 240 ALLIEFGVPQKMIQIRSHGDRYPIADNALADGRKKNRRVTVRL 282
>gi|163732302|ref|ZP_02139748.1| hypothetical protein RLO149_02587 [Roseobacter litoralis Och 149]
gi|161394600|gb|EDQ18923.1| hypothetical protein RLO149_02587 [Roseobacter litoralis Och 149]
Length = 659
Score = 57.9 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 43/125 (34%), Gaps = 14/125 (11%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW--------LEKHDCDFLIEGHADELG 93
E V F+ + + Q ++ + + D ++GH D L
Sbjct: 531 EGDRFVFSSEVLFEPARADLSAEGQQEIAKVARILSSIADEIPPEIDWIIRVDGHTDNLP 590
Query: 94 -----SRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+ L RA +V Y + GI +R+ +G+ P + A A+NR
Sbjct: 591 LSGVGQFADNWELSQGRALSVVKYMVESLGIPPNRLAANGFGEFQPVAVENTPQARAQNR 650
Query: 148 RAIVF 152
R +
Sbjct: 651 RIELK 655
>gi|319952777|ref|YP_004164044.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
gi|319421437|gb|ADV48546.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
Length = 301
Score = 57.9 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 38/77 (49%)
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ + + GH D G+R ++I LG RA Y GI AS++ TS G + P
Sbjct: 224 KIEGANCSVVGHTDSQGNRITNIGLGQERADFAKQYLSENGILASKIIATSKGPDTPIAT 283
Query: 137 GHDEDAYAKNRRAIVFL 153
++ ++NRR ++ L
Sbjct: 284 NDTDEGRSQNRRTVITL 300
>gi|30250467|ref|NP_842537.1| outer membrane protein [Nitrosomonas europaea ATCC 19718]
gi|30139308|emb|CAD86460.1| Bacterial outer membrane protein [Nitrosomonas europaea ATCC 19718]
Length = 231
Score = 57.9 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 10/122 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
S FD ++PA Q L + + LE + D +I G+ D +GS + L ++
Sbjct: 106 VSFSADALFDFDKAVLKPAGKQALDDFAANLEGVNYDLIIAVGYTDRIGSEAYNKNLSIK 165
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGH-DEDAYAK------NRRAIVFLKG 155
RA AV +Y V++GI + R+ G+ P H + A +RR + + G
Sbjct: 166 RAEAVKSYLVSKGIGSDRIFTDGKGEANPVTGDSCHGTKATRALIDCLAPDRRVEIEVAG 225
Query: 156 CR 157
R
Sbjct: 226 TR 227
>gi|58617307|ref|YP_196506.1| peptidoglycan-associated lipoprotein precursor [Ehrlichia
ruminantium str. Gardel]
gi|58416919|emb|CAI28032.1| Peptidoglycan-associated lipoprotein precursor [Ehrlichia
ruminantium str. Gardel]
Length = 216
Score = 57.9 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYA 108
D V+FD I+ +D +L L ++ +I GH D G+ ++ALG +RA A
Sbjct: 43 DKVYFDLDKTVIKDSDKVLLEKLVQKAQEDPTTDIIIVGHTDTRGTDEYNLALGEQRANA 102
Query: 109 VFNYFVARGIS-ASRMKVTSYGKEMP---SVYGHD---EDAYAKNRRAIVFLKGCRANT 160
V ++ ++ S R+ V S GK P + EDA+AKNRR ++ L +T
Sbjct: 103 VRDFIISCDKSLEKRITVRSKGKSEPAILVYSNNPKEAEDAHAKNRRVVITLVNNSTST 161
>gi|322515359|ref|ZP_08068353.1| outer membrane protein A [Actinobacillus ureae ATCC 25976]
gi|322118586|gb|EFX90814.1| outer membrane protein A [Actinobacillus ureae ATCC 25976]
Length = 156
Score = 57.9 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 50/146 (34%), Gaps = 8/146 (5%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQ 67
++L+ S D V+ E+ + ++ FD ++
Sbjct: 16 LLLAGCFSASSLNRDAQAPVAPQVAPVVEETVTPAK-EYTLSGDFLFDFDKSNLTAKGKA 74
Query: 68 VLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT 126
L+N+ ++ I G+ D LGS + L RA + Y V +G+ A +MK
Sbjct: 75 TLNNIAQEIKASGAKKVAITGYTDRLGSPAYNQKLSQERANSAKAYLVNQGVKA-QMKAV 133
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVF 152
G+ NRR +
Sbjct: 134 GRGEANQVKSCLKP-----NRRVHIK 154
>gi|225075662|ref|ZP_03718861.1| hypothetical protein NEIFLAOT_00678 [Neisseria flavescens
NRL30031/H210]
gi|224953084|gb|EEG34293.1| hypothetical protein NEIFLAOT_00678 [Neisseria flavescens
NRL30031/H210]
Length = 219
Score = 57.9 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 47/115 (40%), Gaps = 1/115 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIR-PADIQVLSNLGSWLEKHDCDFLIEGHA 89
+T + Q + ++V F T S ++ A + + + ++ D I GH
Sbjct: 105 ANTNIEVERQGNQIKLVMPENVTFATGSAALSGHAQSALSAAAQTLVQYPDTTLTINGHT 164
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
D G+ + L RA +V + +RG+S++R+ YG P + A
Sbjct: 165 DNTGNDAINEPLSRNRAESVAIFLQSRGVSSTRLSTFGYGSRQPIASNATVEGRA 219
>gi|260911408|ref|ZP_05917999.1| OmpA family protein [Prevotella sp. oral taxon 472 str. F0295]
gi|260634455|gb|EEX52554.1| OmpA family protein [Prevotella sp. oral taxon 472 str. F0295]
Length = 686
Score = 57.9 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 48/138 (34%), Gaps = 28/138 (20%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGL 103
+ + D++F+D Y++RP Q L L E + + H D G+ + L
Sbjct: 514 APVLIDNIFYDLDKYTLRPESKQALDELVKLLNENPNVTIELSAHCDYRGTPEYNKTLAQ 573
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMP---------------------------SVY 136
RA AV +Y + GI+ R+ YGKE P
Sbjct: 574 HRANAVVHYLIEAGIAPQRLTPMGYGKEKPKTIRKKLTERYKWLKEGDVLTEDFITKLDK 633
Query: 137 GHDEDAYAKNRRAIVFLK 154
E NRR ++
Sbjct: 634 DKQEICNQLNRRTEFVVQ 651
>gi|46397593|gb|AAS91729.1| OmpA [Bibersteinia trehalosi]
Length = 364
Score = 57.9 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 53/140 (37%), Gaps = 12/140 (8%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIE 86
+ + + V FD +++PA L + ++ +
Sbjct: 221 GQGAAPVAAPEIVSKNFAFSSDVLFDFGKANLKPAAAASLDAAHAEIQNLGLAAPAIQVN 280
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE------ 140
G+ D +G ++AL RRA +V NY V++G++ + YGK P +
Sbjct: 281 GYTDRIGKDAPNLALSQRRAESVANYMVSKGVAPESITAVGYGKANPVTGNTCDAVKGRK 340
Query: 141 ---DAYAKNRRAIVFLKGCR 157
A +RR + ++G +
Sbjct: 341 ALIACLAPDRRVELQVQGSK 360
>gi|126664115|ref|ZP_01735108.1| putative flagellar motor protein MotB [Flavobacteria bacterium
BAL38]
gi|126623829|gb|EAZ94524.1| putative flagellar motor protein MotB [Flavobacteria bacterium
BAL38]
Length = 278
Score = 57.9 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 59/147 (40%), Gaps = 8/147 (5%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+++ + I PD +N S+ D++ F + SY + VL+ +
Sbjct: 114 VTLALVTSLKREVGIDDPDININVEKGV--IMISIADNLLFKSGSYEVSDKAKGVLAKVA 171
Query: 74 SWLE-KHDCDFLIEGHADELGSRN----SSIALGLRRAYAVFNYFVA-RGISASRMKVTS 127
+ K D + ++EGH D + +N + L ++RA ++ G++ ++
Sbjct: 172 KVINSKPDFECMVEGHTDNVPIKNAVLLDNWDLSVKRATSIVRVLHKELGVNPKQLIPAG 231
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+P V AKNRR + +
Sbjct: 232 RSSYIPLVENDSPANRAKNRRTKIIIM 258
>gi|288802401|ref|ZP_06407840.1| OmpA family protein [Prevotella melaninogenica D18]
gi|288334929|gb|EFC73365.1| OmpA family protein [Prevotella melaninogenica D18]
Length = 672
Score = 57.9 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 38/174 (21%), Positives = 61/174 (35%), Gaps = 33/174 (18%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG-----DSVFFDTSSYSIRPADIQ 67
I + + +G N +I + ++ + + + D++F+D ++RP +
Sbjct: 462 IFLATCNGYLNHKEEIKVGNVDDSKVYTLQFALAGINVPILIDNIFYDFDKATLRPESEK 521
Query: 68 VLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT 126
L L + E + + H D LGS + + L RRA AV Y A GI R+
Sbjct: 522 ALDALVNLLKENPNVTIELSAHTDYLGSADYNKRLSQRRADAVVAYLTAHGIVRDRLTPV 581
Query: 127 SYGKEMP---------------------------SVYGHDEDAYAKNRRAIVFL 153
YGKE P E A NRR +
Sbjct: 582 GYGKERPKKIRKKVTEKYPWLKENDVLTEDFIKKLDKEKQEIANQLNRRTEFTV 635
>gi|237654026|ref|YP_002890340.1| OmpA/MotB domain protein [Thauera sp. MZ1T]
gi|237625273|gb|ACR01963.1| OmpA/MotB domain protein [Thauera sp. MZ1T]
Length = 374
Score = 57.9 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 44/118 (37%), Gaps = 12/118 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLG--------SWLEKHDCDFLIEGHADELGS----R 95
V F ++S + + L+ L + ++GH D
Sbjct: 254 FSSEVLFASASDEVSADGMVQLTRLAETLKTLSADMPKDLPWVLQVDGHTDRRPIATARF 313
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA A+ + +GI R+ T YG+ P E+AY +NRR + L
Sbjct: 314 PSNWELSTARALAIVKFLRGQGIPPERLAATGYGEFHPLDARSTEEAYTRNRRIELKL 371
>gi|170751735|ref|YP_001757995.1| OmpA/MotB domain-containing protein [Methylobacterium radiotolerans
JCM 2831]
gi|170658257|gb|ACB27312.1| OmpA/MotB domain protein [Methylobacterium radiotolerans JCM 2831]
Length = 337
Score = 57.9 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 47/118 (39%), Gaps = 12/118 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIEGHAD----ELGSR 95
+ V F S +++P L + + + ++GH D
Sbjct: 217 LQSEVLFPAGSATLKPEAGPELDRIAGAVSELAKQIPADLPWVLRVDGHTDARPISTSQF 276
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ +L RA AV + +GI + ++G+ P G E+AYA+NRR + L
Sbjct: 277 PSNWSLSAARAIAVVQFLAGKGIPPQHLLAGAFGEFQPLEAGATEEAYARNRRIEMKL 334
>gi|149372358|ref|ZP_01891546.1| outer membrane protein, peptidoglycan-associated lipoprotein
[unidentified eubacterium SCB49]
gi|149354748|gb|EDM43311.1| outer membrane protein, peptidoglycan-associated lipoprotein
[unidentified eubacterium SCB49]
Length = 631
Score = 57.9 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 38/110 (34%), Gaps = 6/110 (5%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
+ ++FD IR L + S + + H D ++ L RRA A
Sbjct: 520 NPIYFDLDKSFIRSDAAIELQKIISLLNQYPQMKIDVRSHTDSRADDAYNLDLSDRRAKA 579
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGH-----DEDAYAKNRRAIVFL 153
Y + GI +SR+ YG+ + NRR+ +
Sbjct: 580 TIAYLIKNGIDSSRLSGRGYGETQLINGCSNGVDCTSIEHQLNRRSEFII 629
>gi|86134634|ref|ZP_01053216.1| OmpA family protein [Polaribacter sp. MED152]
gi|85821497|gb|EAQ42644.1| OmpA family protein [Polaribacter sp. MED152]
Length = 527
Score = 57.9 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRNS 97
++++Q ++ ++FD + +I+ Q L + I H+D G+ +
Sbjct: 400 TVRDQVMLNIP-PIYFDLAKATIKKTSEQELQMVVDLMNRYPKIIVQIRAHSDSRGNDSY 458
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD-----EDAYAKNRRAIVF 152
++ L RRA A N+ + +GI+ +R+ +G+E + E+ + +NRR
Sbjct: 459 NLRLSDRRAKATVNWILDKGIAKNRIFGIGFGEEDLVNECSNGVQCSEEKHLENRRTEFV 518
Query: 153 L 153
+
Sbjct: 519 I 519
>gi|330993342|ref|ZP_08317277.1| Outer membrane protein [Gluconacetobacter sp. SXCC-1]
gi|329759372|gb|EGG75881.1| Outer membrane protein [Gluconacetobacter sp. SXCC-1]
Length = 364
Score = 57.9 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 43/109 (39%), Gaps = 7/109 (6%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSR------NSSIALGLR 104
VFFD ++ ++++ + G+ D + ++ L +R
Sbjct: 255 VFFDWDGAALTGRSREIVAEAAQASTHVQTTRIEVNGYTDNTAAHPGPRGQQYNLGLSMR 314
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA +V + G+ A+ + + YG+ P V + +NRR + L
Sbjct: 315 RAESVKAELIRDGVPANAIDIHGYGEAHPLVPTGPDTREPQNRRVEIIL 363
>gi|269964049|ref|ZP_06178354.1| outer membrane protein, putative [Vibrio harveyi 1DA3]
gi|269831190|gb|EEZ85344.1| outer membrane protein, putative [Vibrio harveyi 1DA3]
Length = 206
Score = 57.9 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/138 (22%), Positives = 57/138 (41%), Gaps = 1/138 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHD 80
D + + + + S + V F S I P + + L + E
Sbjct: 52 DLCPGTPPTSEIDNDGCGEYIKSSEQMQVRVLFANDSDEINPVFHRQIRQLSEFLNEYPS 111
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ G+A ++G ++ L RRA V + + GI+A+R+++ YG + G DE
Sbjct: 112 TSIELHGYASKVGGSTHNLDLSKRRANNVRSALLGYGIAANRVRIVGYGDTHLAQQGTDE 171
Query: 141 DAYAKNRRAIVFLKGCRA 158
++A NRR + G +
Sbjct: 172 VSHALNRRVTASVVGYKG 189
>gi|317180579|dbj|BAJ58365.1| flagellar motor protein MotB [Helicobacter pylori F32]
Length = 257
Score = 57.9 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 51/152 (33%), Gaps = 7/152 (4%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS-SYSIRPADIQV 68
+++ + S I+ + + + S+ F+ + S +I +
Sbjct: 82 MASESSKPASQNTETKATIARKGEGSVLEQIDQGSVLKLPSSLLFENATSDAINQDMMLY 141
Query: 69 LSNLGSWLEKHDCDFLIE--GHADELG----SRNSSIALGLRRAYAVFNYFVARGISASR 122
+ + ++K I G D S L RAY V + G++ ++
Sbjct: 142 IERIAKIIQKLPKRVHINVRGFTDNTPLTKTRFKSHYELAANRAYRVMKVLIQYGVNPNQ 201
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ +SYG P + KN R +F
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEIFFS 233
>gi|260879443|ref|ZP_05891798.1| sodium-type flagellar protein MotY [Vibrio parahaemolyticus
AN-5034]
gi|308093505|gb|EFO43200.1| sodium-type flagellar protein MotY [Vibrio parahaemolyticus
AN-5034]
Length = 292
Score = 57.9 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 25/78 (32%), Gaps = 5/78 (6%)
Query: 81 CDFLIEGHADELGSRNSSIALGLRRA-----YAVFNYFVARGISASRMKVTSYGKEMPSV 135
I + + RA +++ + + R++V YGK P
Sbjct: 210 VTIKISTSCWWRHTLIQPMVRAKARAYRSDEQSLYVLTLNHWVCRDRIQVQGYGKRRPIA 269
Query: 136 YGHDEDAYAKNRRAIVFL 153
KNRR ++ L
Sbjct: 270 DNGTPIGKDKNRRVVISL 287
>gi|57239289|ref|YP_180425.1| peptidoglycan-associated lipoprotein precursor [Ehrlichia
ruminantium str. Welgevonden]
gi|58579253|ref|YP_197465.1| peptidoglycan-associated lipoprotein precursor [Ehrlichia
ruminantium str. Welgevonden]
gi|57161368|emb|CAH58291.1| hypothetical protein Erum5620 [Ehrlichia ruminantium str.
Welgevonden]
gi|58417879|emb|CAI27083.1| Peptidoglycan-associated lipoprotein precursor [Ehrlichia
ruminantium str. Welgevonden]
Length = 217
Score = 57.9 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYA 108
D V+FD I+ +D +L L ++ +I GH D G+ ++ALG +RA A
Sbjct: 43 DKVYFDLDKTVIKDSDKVLLEKLVQKAQEDPTTDIIIVGHTDTRGTDEYNLALGEQRANA 102
Query: 109 VFNYFVARGIS-ASRMKVTSYGKEMP---SVYGHD---EDAYAKNRRAIVFLKGCRANT 160
V ++ ++ S R+ V S GK P + EDA+AKNRR ++ L +T
Sbjct: 103 VRDFIISCDKSLEKRITVRSKGKSEPAILVYSNNPKEAEDAHAKNRRVVITLVNNSTST 161
>gi|257091690|ref|YP_003165331.1| OmpA/MotB domain-containing protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257044214|gb|ACV33402.1| OmpA/MotB domain protein [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 198
Score = 57.9 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 1/119 (0%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSR 95
+++ V +++F S + A L L + D +I GH D +G
Sbjct: 80 GAAIDASPPPLVRFTLYFLEGSDELTAASKTELVAILAEIKARPVPDIVIVGHTDRVGMV 139
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ L LRRA + + +GI+ ++ G+ P V DE +NRR + ++
Sbjct: 140 ADNDRLALRRADSFRKKLLQQGIADEAIQTAGRGEREPLVNTPDETPEPRNRRVEILVR 198
>gi|326794724|ref|YP_004312544.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
gi|326545488|gb|ADZ90708.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
Length = 304
Score = 57.9 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 41/104 (39%), Gaps = 2/104 (1%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYAVF 110
F T+ + L + ++ I+GH D +GSR + L +RA +
Sbjct: 187 LFPTNGADLTDRIKHRLDLVALYVNNDPSIQYIYIDGHTDTIGSRRDNRELSKKRAEKIT 246
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
Y + +G+ A + +G+ P +NRR + L+
Sbjct: 247 AYLLEQGVPADMIVSRYHGERYPVASSRTNQGRERNRRVTIRLE 290
>gi|330993344|ref|ZP_08317279.1| Outer membrane protein [Gluconacetobacter sp. SXCC-1]
gi|329759374|gb|EGG75883.1| Outer membrane protein [Gluconacetobacter sp. SXCC-1]
Length = 368
Score = 57.5 bits (137), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 43/109 (39%), Gaps = 7/109 (6%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSR------NSSIALGLR 104
VFFD ++ ++++ + G+ D + ++ L +R
Sbjct: 259 VFFDWDGAALTGRSREIVAEAAQASTHVQTTRIEVNGYTDNTAAHPGPRGQQYNLGLSMR 318
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA +V + G+ A+ + + YG+ P V + +NRR + L
Sbjct: 319 RADSVKAELIRDGVPANAIDIHGYGEAHPLVPTGPDTREPQNRRVEIIL 367
>gi|307637506|gb|ADN79956.1| Flagellar motor rotation protein [Helicobacter pylori 908]
gi|325996095|gb|ADZ51500.1| Flagellar motor rotation protein [Helicobacter pylori 2018]
gi|325997691|gb|ADZ49899.1| Flagellar motor rotation protein [Helicobacter pylori 2017]
Length = 257
Score = 57.5 bits (137), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 50/152 (32%), Gaps = 7/152 (4%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS-SYSIRPADIQV 68
+++ + S I+ + + + S+ F+ + S +I +
Sbjct: 82 MASESSKPASQNTETKATIARKGEGSVLEQIDQGSVLKLPSSLLFENATSDAINQDMMLY 141
Query: 69 LSNLGSWLEKHDCDFLIE--GHADELG----SRNSSIALGLRRAYAVFNYFVARGISASR 122
+ + ++K I G D S L RAY V + G+ ++
Sbjct: 142 IERIAKIIQKLPKRVHINVRGFTDNTPLIKTRFKSHYELAANRAYRVMKVLIQYGVDPNQ 201
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ +SYG P + KN R +F
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEIFFS 233
>gi|210135015|ref|YP_002301454.1| flagellar motor protein MotB [Helicobacter pylori P12]
gi|210132983|gb|ACJ07974.1| flagellar motor rotation protein MotB [Helicobacter pylori P12]
Length = 257
Score = 57.5 bits (137), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 51/152 (33%), Gaps = 7/152 (4%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS-SYSIRPADIQV 68
+++ + S I+ + + + S+ F+ + S +I +
Sbjct: 82 MASESSKPASQNTETKATIARKGEGSVLEQIDQGSVLKLPSSLLFENATSDAINQDMMLY 141
Query: 69 LSNLGSWLEKHDCDFLIE--GHADELG----SRNSSIALGLRRAYAVFNYFVARGISASR 122
+ + ++K I G D S L RAY V + G++ ++
Sbjct: 142 IERIAKIIQKLPKRVHINVRGFTDNTPLNKTRFKSHYELAANRAYRVMKVLIQYGVNPNQ 201
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ +SYG P + KN R +F
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEIFFS 233
>gi|119474693|ref|ZP_01615046.1| hypothetical protein GP2143_12776 [marine gamma proteobacterium
HTCC2143]
gi|119450896|gb|EAW32129.1| hypothetical protein GP2143_12776 [marine gamma proteobacterium
HTCC2143]
Length = 209
Score = 57.5 bits (137), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 50/130 (38%), Gaps = 10/130 (7%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH----DCDFLIE 86
+ + SV F T+S ++ ++L L + L+ + D ++
Sbjct: 69 AAPLATGRVTLTNGRIGISGSVLFATNSDQLQVEGRELLQTLVAPLQVYLGERDEMLMVS 128
Query: 87 GHADELGSRN------SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
G D+ + + L RA V + G+ +S + ++G + P V D
Sbjct: 129 GFTDDKPIQRGNNRFADNWELSSERALTVTRALIEEGMPSSMVFAAAFGAQQPVVPNTDG 188
Query: 141 DAYAKNRRAI 150
D+ A+NRR
Sbjct: 189 DSRARNRRVE 198
>gi|46397588|gb|AAS91725.1| OmpA [Bibersteinia trehalosi]
Length = 364
Score = 57.5 bits (137), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 57/142 (40%), Gaps = 13/142 (9%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FL 84
V+ E + + + + V FD +++PA L + ++
Sbjct: 220 GQGAAPVVAEPEIVTK-NFAFSSDVLFDFGKANLKPAAAASLDAAHAEIQNLGLAAPAIQ 278
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE---- 140
+ G+ D +G ++AL RRA +V NY V++G++ + YGK P +
Sbjct: 279 VNGYTDRIGKDAPNLALSQRRAESVANYMVSKGVAPESITAVGYGKANPVTGNTCDAVKG 338
Query: 141 -----DAYAKNRRAIVFLKGCR 157
A +RR + ++G +
Sbjct: 339 RKALIACLAPDRRVELQVQGSK 360
>gi|271962882|ref|YP_003337078.1| Outer membrane protein and related peptidoglycan- associated
(lipo)protein-like protein [Streptosporangium roseum DSM
43021]
gi|270506057|gb|ACZ84335.1| Outer membrane protein and related peptidoglycan- associated
(lipo)protein-like protein [Streptosporangium roseum DSM
43021]
Length = 535
Score = 57.5 bits (137), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 40/119 (33%), Gaps = 2/119 (1%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFL 84
T SPD + E ++ V F + + P VL+
Sbjct: 240 TPSESPDRSEETTDDGEDLHVNLSSDVLFALNRADLTPRSRAVLTRTAKLIDTSEGATIT 299
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDA 142
+EGHAD G+ + L RRA AV + R + YG P DE+
Sbjct: 300 VEGHADSSGTDAINDPLSQRRAQAVQRALSGLLTRTGVRFQAKGYGSRRPLYGNEDEEG 358
>gi|331014336|gb|EGH94392.1| OmpA family protein [Pseudomonas syringae pv. lachrymans str.
M302278PT]
Length = 447
Score = 57.5 bits (137), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/147 (17%), Positives = 49/147 (33%), Gaps = 5/147 (3%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS 70
+ + K+ + + + + + + F SS + Q L
Sbjct: 303 AIVAQSGFVSQTVQALKVPPTAQMPADYQALARKAERLSVNFRFAQSSARLDNKAQQDLK 362
Query: 71 NLGSWLEKH---DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
+ +L+ + + G D + L RA AV + G++ +
Sbjct: 363 RVAEYLKASGKLNQQVTLVGFGDAKSDPARAALLSRLRAMAVRRELIKSGVTFRDIL--G 420
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G EMP +D KNRR V+++
Sbjct: 421 LGDEMPVATNDIDDGRIKNRRVEVWVQ 447
>gi|217032506|ref|ZP_03437997.1| hypothetical protein HPB128_180g5 [Helicobacter pylori B128]
gi|216945784|gb|EEC24407.1| hypothetical protein HPB128_180g5 [Helicobacter pylori B128]
Length = 247
Score = 57.5 bits (137), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/153 (16%), Positives = 50/153 (32%), Gaps = 7/153 (4%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS-SYSIRPADIQV 68
+++ + S I+ + + + S+ F+ + S +I +
Sbjct: 82 MASESSKPASQNTETKATIARKGEGSVLEQIDQGSVLKLPSSLLFENATSDAINQDMMLY 141
Query: 69 LSNLGSWLEKHDCDFLIE--GHADELG----SRNSSIALGLRRAYAVFNYFVARGISASR 122
+ + ++K I G D S L RAY V + G+ ++
Sbjct: 142 IERIAKIIQKLPKRVHINVRGFTDNTPLNKTRFKSHYELAANRAYRVMKVLIQYGVDPNQ 201
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+ +SYG P + KN R +F
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEIFFSN 234
>gi|153838882|ref|ZP_01991549.1| outer membrane protein [Vibrio parahaemolyticus AQ3810]
gi|149747673|gb|EDM58587.1| outer membrane protein [Vibrio parahaemolyticus AQ3810]
Length = 206
Score = 57.5 bits (137), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 67/189 (35%), Gaps = 31/189 (16%)
Query: 1 MQYSTIFIILSAITMMSIS-------------GIDNLDTKISSPDTVLNESSLQEQF--- 44
M+ + + LS I + + D + D V+N L
Sbjct: 1 MKPMKLLLALSVIAVTQQAIAEDEYDYRAFPTAEQIADLQDEDNDGVINARDLCPGTPAG 60
Query: 45 --------------SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHA 89
S + V F S I P + + L +L+ + ++G+A
Sbjct: 61 SEVDNDGCGEYIKASEKMQVRVLFANDSDEINPVFRRQIRELSEFLKDYPTTSIELQGYA 120
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
+ G + L RRA V + + GI +R+++ +G + G D+ ++A NRR
Sbjct: 121 SKTGGSKHNQDLSERRAKNVRDALLGYGIEPNRVRIIGFGDTHLAEQGTDQVSHALNRRV 180
Query: 150 IVFLKGCRA 158
+ G +
Sbjct: 181 TASVVGYKG 189
>gi|46397578|gb|AAS91717.1| OmpA [Bibersteinia trehalosi]
gi|46397583|gb|AAS91721.1| OmpA [Bibersteinia trehalosi]
Length = 364
Score = 57.5 bits (137), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 57/142 (40%), Gaps = 13/142 (9%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FL 84
V+ E + + + + V FD +++PA L + ++
Sbjct: 220 GQGAAPVVAEPEIVTK-NFAFSSDVLFDFGKANLKPAAAASLDAAHAEIQNLGLAAPAIQ 278
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE---- 140
+ G+ D +G ++AL RRA +V NY V++G++ + YGK P +
Sbjct: 279 VNGYTDRIGKDAPNLALSQRRAESVANYMVSKGVAPESITAVGYGKANPVTGNTCDAVKG 338
Query: 141 -----DAYAKNRRAIVFLKGCR 157
A +RR + ++G +
Sbjct: 339 RKALIACLAPDRRVELQVQGSK 360
>gi|332304548|ref|YP_004432399.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332171877|gb|AEE21131.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 368
Score = 57.5 bits (137), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/159 (16%), Positives = 56/159 (35%), Gaps = 12/159 (7%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQE----------QFSSSVGDSVFFDTSSYS 60
A+ ++ + D + S D N S + + + F +S
Sbjct: 204 CALAATAVEADSDNDGVVDSQDKCANTPSSDKVDATGCSIFTEVEVEETLRILFANNSSE 263
Query: 61 IRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGI 118
I + + +++++ +IEG+A G + + L RA AV + I
Sbjct: 264 IANRANSDIRDFAAFMKRFPSTDTVIEGYASAPGESDYNQWLSEERAKAVRMVLIEDYDI 323
Query: 119 SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
+R+ YG+ ++A NRR + + +
Sbjct: 324 KPARITAVGYGESKLLDAPTAKEANKINRRIVARVSASK 362
>gi|309779564|ref|ZP_07674325.1| OmpA family protein [Ralstonia sp. 5_7_47FAA]
gi|308921805|gb|EFP67441.1| OmpA family protein [Ralstonia sp. 5_7_47FAA]
Length = 217
Score = 57.5 bits (137), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 46/116 (39%), Gaps = 10/116 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD----FLIEGHADELGS------R 95
+ +V F +S ++P ++ +L L + ++ G +D+
Sbjct: 85 IGINGNVLFAINSDQLQPEGRALMKSLAGPLAAYLTSREEILMVSGFSDDQQVRAGNRLF 144
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ L +RA V + GI AS + ++G + P D+ AKNRR +
Sbjct: 145 ADNWELSAKRALTVTRALIDEGIPASSVFAAAFGSQQPVSSNADDVGRAKNRRVEI 200
>gi|260432019|ref|ZP_05785990.1| OmpA domain protein [Silicibacter lacuscaerulensis ITI-1157]
gi|260415847|gb|EEX09106.1| OmpA domain protein [Silicibacter lacuscaerulensis ITI-1157]
Length = 518
Score = 57.5 bits (137), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 39/108 (36%), Gaps = 7/108 (6%)
Query: 54 FDTSSYSIRPADIQVLSNLGSW---LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
F+ S + L + + G +D G S+ + LRRA V
Sbjct: 411 FEPGSSRPDAQSRSNIQQLAQALEAGQYDGRKLVFVGFSDGDGPAESNARIALRRAQTVR 470
Query: 111 NYFVARGISASR----MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
N +A ++ + V +G+ MP + NRR ++++
Sbjct: 471 NAVLAAVQTSVPDSVGISVEGFGEAMPLACDDTDWGRKANRRVEIWVR 518
>gi|170724840|ref|YP_001758866.1| OmpA/MotB domain-containing protein [Shewanella woodyi ATCC 51908]
gi|169810187|gb|ACA84771.1| OmpA/MotB domain protein [Shewanella woodyi ATCC 51908]
Length = 201
Score = 57.5 bits (137), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 2/108 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAV 109
+ F SY I P + + +++ + IEGH + GS ++AL RA AV
Sbjct: 76 KILFPNDSYYIDPMYYDQVEIIATFMRQFPNTKVTIEGHCSKTGSYEHNLALSQNRANAV 135
Query: 110 FNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
R I R+ Y + P A+ +NRR I + G
Sbjct: 136 TTALSERFGIEPDRLTAIGYSFDRPIDLSETAMAHTRNRRVIAEVTGE 183
>gi|148260706|ref|YP_001234833.1| OmpA/MotB domain-containing protein [Acidiphilium cryptum JF-5]
gi|326403901|ref|YP_004283983.1| hypothetical protein ACMV_17540 [Acidiphilium multivorum AIU301]
gi|146402387|gb|ABQ30914.1| OmpA/MotB domain protein [Acidiphilium cryptum JF-5]
gi|325050763|dbj|BAJ81101.1| hypothetical protein ACMV_17540 [Acidiphilium multivorum AIU301]
Length = 342
Score = 57.5 bits (137), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 43/115 (37%), Gaps = 12/115 (10%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIEGHADELGS----RNSS 98
+V F + S + ++ + +E + G+AD+ +
Sbjct: 224 AVLFPSDSARLSAKGKAEIAKVAQAIEAIAPKIPDKINWVLSVTGYADKEAITGGPYKDN 283
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V + +A G+ +R+ +G + P G+ A+NRR L
Sbjct: 284 FDLSAARALSVLHLLIADGVPKNRVVAAGFGADHPIATGNTPQDLAQNRRIEFRL 338
>gi|85705019|ref|ZP_01036119.1| OmpA domain protein [Roseovarius sp. 217]
gi|85670341|gb|EAQ25202.1| OmpA domain protein [Roseovarius sp. 217]
Length = 311
Score = 57.5 bits (137), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/145 (19%), Positives = 43/145 (29%), Gaps = 6/145 (4%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS-----SYSIRPADIQVLSNLGS 74
G ++ T SP+ Q G +V + + +
Sbjct: 166 GQESDATGPRSPEVDDTSPPDVVQALKRYGHAVLEGLDFGSGDNALGPGPHPSLEALAAY 225
Query: 75 WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMP 133
L K + + GH D G +IAL RA AV + ++++ G P
Sbjct: 226 LLTKPNTRVALVGHTDSTGGLEGNIALSRSRAEAVLSVLTEIHGVPATQLEAHGIGYLAP 285
Query: 134 SVYGHDEDAYAKNRRAIVFLKGCRA 158
D NRR L A
Sbjct: 286 LAPNTTGDGRESNRRVEAVLLDTAA 310
>gi|84500108|ref|ZP_00998374.1| flagellar motor protein [Oceanicola batsensis HTCC2597]
gi|84392042|gb|EAQ04310.1| flagellar motor protein [Oceanicola batsensis HTCC2597]
Length = 852
Score = 57.5 bits (137), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 39/119 (32%), Gaps = 14/119 (11%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLG--------SWLEKHDCDFLIEGHADE-----LGS 94
V FD + + ++ + E D ++GH D+ G
Sbjct: 730 FSSEVLFDPGQADLSEGGQRQIAGIAATLRSLADEIPEGIDWVLRVDGHTDDVPLSGQGE 789
Query: 95 RNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ L RA +V Y G R+ +G+ P G E A A NRR +
Sbjct: 790 FQDNWELSQARALSVVRYMEDFLGFPPDRLAANGFGEHQPIASGDSEAARAANRRIELK 848
>gi|254437176|ref|ZP_05050670.1| OmpA family protein [Octadecabacter antarcticus 307]
gi|198252622|gb|EDY76936.1| OmpA family protein [Octadecabacter antarcticus 307]
Length = 189
Score = 57.5 bits (137), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 40/104 (38%), Gaps = 4/104 (3%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
+ F I +D Q L + + FLI GH D S +I L RRA
Sbjct: 86 IPTDTLFANDEDRIANSDKQRLM--AFFQQADAFGFLIYGHTDSNASDEYNIDLSNRRAS 143
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
V A+ + + +G+ P+ +D A+NRR V
Sbjct: 144 MVAGV--AQDAGTRVVDIRGFGERRPAATNATQDGRAQNRRVEV 185
>gi|15611819|ref|NP_223470.1| flagellar motor protein MotB [Helicobacter pylori J99]
gi|298736519|ref|YP_003729045.1| chemotaxis protein MotB [Helicobacter pylori B8]
gi|12229872|sp|Q9ZL29|MOTB_HELPJ RecName: Full=Motility protein B; AltName: Full=Chemotaxis protein
MotB
gi|4155316|gb|AAD06331.1| FLAGELLAR MOTOR PROTEIN [Helicobacter pylori J99]
gi|298355709|emb|CBI66581.1| chemotaxis protein MotB [Helicobacter pylori B8]
Length = 257
Score = 57.5 bits (137), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 50/152 (32%), Gaps = 7/152 (4%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS-SYSIRPADIQV 68
+++ + S I+ + + + S+ F+ + S +I +
Sbjct: 82 MASESSKPASQNTETKATIARKGEGSVLEQIDQGSVLKLPSSLLFENATSDAINQDMMLY 141
Query: 69 LSNLGSWLEKHDCDFLIE--GHADELG----SRNSSIALGLRRAYAVFNYFVARGISASR 122
+ + ++K I G D S L RAY V + G+ ++
Sbjct: 142 IERIAKIIQKLPKRVHINVRGFTDNTPLNKTRFKSHYELAANRAYRVMKVLIQYGVDPNQ 201
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ +SYG P + KN R +F
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEIFFS 233
>gi|83949920|ref|ZP_00958653.1| flagellar motor protein [Roseovarius nubinhibens ISM]
gi|83837819|gb|EAP77115.1| flagellar motor protein [Roseovarius nubinhibens ISM]
Length = 627
Score = 57.5 bits (137), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 44/125 (35%), Gaps = 14/125 (11%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH--------DCDFLIEGHADELG 93
E V F ++ ++ + L K D ++GH D++
Sbjct: 499 EGDRFVFSSEVLFAPGRAALSTEGRGEVAKVAEILRKVAGDIPPELDWVIRVDGHTDDVP 558
Query: 94 S-----RNSSIALGLRRAYAVFNYFV-ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+ L RA +V Y + + GI R+ +G+ P G +A A+NR
Sbjct: 559 IVNSAEFADNWELSQARALSVVRYMIESLGIPPDRLSANGFGQYQPVAQGDSAEARAQNR 618
Query: 148 RAIVF 152
R +
Sbjct: 619 RIELK 623
>gi|312892475|ref|ZP_07751968.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
gi|311295055|gb|EFQ72231.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
Length = 724
Score = 57.5 bits (137), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 6/109 (5%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAV 109
+++D IRP L++L + L + ++ H D S + +I L RR+ +
Sbjct: 594 KIYYDLDKSFIRPDAEGALNHLINLLNSYPGLKVIVASHCDTRASIDYNIGLSQRRSLSA 653
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGH-----DEDAYAKNRRAIVFL 153
Y +A G+S +R+++ +GK + E + NRR L
Sbjct: 654 RAYLLAHGVSENRIQMEYFGKSRLANKCADGVPCTEADHQLNRRTEFVL 702
>gi|167623057|ref|YP_001673351.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis
HAW-EB4]
gi|167353079|gb|ABZ75692.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4]
Length = 365
Score = 57.5 bits (137), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F +S + + + L +++++H + I G A G + ++ L RRA +V
Sbjct: 254 FANNSAEVEKSSYGAIRELATYMKQHPNAEVTISGFASNTGKADYNMDLSERRAASVAEI 313
Query: 113 FVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
+ I+ R+ YG P + G +A A NRR
Sbjct: 314 LINEYDIAPGRVSSKGYGITRPLMEGSSAEANAVNRRIE 352
>gi|257091971|ref|YP_003165612.1| hypothetical protein CAP2UW1_0326 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257044495|gb|ACV33683.1| OmpA/MotB domain protein [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 214
Score = 57.5 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 50/115 (43%), Gaps = 10/115 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD----FLIEGHADELGSRN----- 96
+ SV F +S ++PA +L +L + L + + ++ G D++ ++
Sbjct: 84 IGISGSVLFALNSDQLQPAGRLLLKSLVAPLRVYLGERDELLMVSGFTDDVPIQHGNSRF 143
Query: 97 -SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
+ L +RA V + G+ +S + ++G E P D+ ++NRR
Sbjct: 144 VDNWELSAQRALTVTRALIDEGMPSSLIFAAAFGTEQPVASNADDRGRSQNRRVE 198
>gi|258541844|ref|YP_003187277.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-01]
gi|256632922|dbj|BAH98897.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-01]
gi|256635979|dbj|BAI01948.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-03]
gi|256639034|dbj|BAI04996.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-07]
gi|256642088|dbj|BAI08043.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-22]
gi|256645143|dbj|BAI11091.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-26]
gi|256648198|dbj|BAI14139.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-32]
gi|256651251|dbj|BAI17185.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256654242|dbj|BAI20169.1| outer membrane protein OmpA [Acetobacter pasteurianus IFO 3283-12]
Length = 411
Score = 57.5 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 38/111 (34%), Gaps = 8/111 (7%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRN-------SSIALGL 103
VFFD + ++ + G+ D + ++ L L
Sbjct: 301 VFFDWDKSDLTDRARSIVGVAAQAAAHVALTRITVSGYTDNSSAHPGQKAGEEYNMRLSL 360
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RRA V + G+ + + + YG+ P V A+NRR + +
Sbjct: 361 RRAEVVKAELMRDGVPGTTIDIHGYGETHPLVTTGPNTKEAQNRRVEIIFR 411
>gi|218675305|ref|ZP_03524974.1| hypothetical conserved membrane protein [Rhizobium etli GR56]
Length = 206
Score = 57.5 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 39/108 (36%), Gaps = 4/108 (3%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLR 104
V V F S +I P +L L S +++ D I GH D G + L
Sbjct: 97 DQVNYRVQFAFDSSAIAPEQKPMLQKLCSVVKEMDIKLIRIVGHTDASGGARYNQNLSTL 156
Query: 105 RAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA V +F R++ G++ P A +NRR
Sbjct: 157 RAREVARFFTEDCHIPRERLEAVGVGEQFPLDP-QTPKAD-ENRRVEF 202
>gi|77465494|ref|YP_354997.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides 2.4.1]
gi|77389912|gb|ABA81096.1| OmpA/MotB domain protein [Rhodobacter sphaeroides 2.4.1]
Length = 254
Score = 57.5 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 45/139 (32%), Gaps = 9/139 (6%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQF-----SSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
G D L P+ E F + V + F S + +L+ L +
Sbjct: 114 GADRLAAADPPPEGRETAEVSPESFGLLDPALQVNVRIHFAFDSAVLAADQTPLLAQLCT 173
Query: 75 WLEKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEM 132
++ D I GH D GS + L L RA V Y R++ G+
Sbjct: 174 VMKASDIRLFQIVGHTDAAGSEAYNQQLSLLRAEEVRRYLTGPCGIAPERLRAVGMGE-R 232
Query: 133 PSVYGHDEDAYAKNRRAIV 151
D + +NRR
Sbjct: 233 FLADKKDPRS-GENRRVEF 250
>gi|258648579|ref|ZP_05736048.1| OmpA family protein [Prevotella tannerae ATCC 51259]
gi|260851358|gb|EEX71227.1| OmpA family protein [Prevotella tannerae ATCC 51259]
Length = 691
Score = 57.5 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 34/181 (18%), Positives = 64/181 (35%), Gaps = 30/181 (16%)
Query: 2 QYSTIFIILSAITM-MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
+ +T ++ L+ ++I+ D+ + VL L + +VF+ +
Sbjct: 472 KANTKYLFLATCNGYLNIANTLVPDSSTTEHQYVLQFP-LPNMNIPVLVRNVFYQFDKAA 530
Query: 61 IRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
I + L L + L+ + + D G+ + L +RA V +Y +++GI
Sbjct: 531 ITDSSKVALDRLAALLKDNPHITIELSSNCDYRGTDAYNDRLSQQRAENVVHYLISQGIP 590
Query: 120 ASRMKVTSYGKEMP-------------SVYGHD--------------EDAYAKNRRAIVF 152
A+R+ YGK+ P G E A NRR
Sbjct: 591 AARLTPKGYGKKNPKIVSKKLAETYTFLKEGDTLTTAYIMKLPPKEQEICNALNRRTEFR 650
Query: 153 L 153
+
Sbjct: 651 V 651
>gi|254230012|ref|ZP_04923412.1| outer membrane protein [Vibrio sp. Ex25]
gi|151937453|gb|EDN56311.1| outer membrane protein [Vibrio sp. Ex25]
Length = 288
Score = 57.5 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 53/141 (37%), Gaps = 1/141 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
T + + ++ ++ + + + F S I P + L+ L H
Sbjct: 134 SQTTCTPPDDIEALRSDLNVVAEIYALLNIDNQFAVDSAEINPKYMGHLAEAAYILRDHP 193
Query: 81 -CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
++ GHAD G+ + + L RA V Y GI++ R+ S G +P G
Sbjct: 194 NLTLVVTGHADVTGAPDYNQKLAQARAEQVKRYLTVFGITSERVTTKSVGDSLPLYEGET 253
Query: 140 EDAYAKNRRAIVFLKGCRANT 160
NRR + + +++
Sbjct: 254 PAVRLTNRRVSIEVISPNSDS 274
>gi|114765941|ref|ZP_01444955.1| OmpA/MotB domain protein [Pelagibaca bermudensis HTCC2601]
gi|114541755|gb|EAU44793.1| OmpA/MotB domain protein [Roseovarius sp. HTCC2601]
Length = 248
Score = 57.5 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 44/142 (30%), Gaps = 11/142 (7%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQF-------SSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ D+ + + P+ L ++ V + F S +I L
Sbjct: 105 ASSDSAPQRPADPNRPLLAAASDAPMVFGQLAPELQVNLHIEFGFDSAAISDDQKPKLQT 164
Query: 72 LGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYG 129
+ + I GH D GS + L + RA V + SR++ G
Sbjct: 165 VCMALMAADVGKIRIVGHTDSAGSDAYNETLSVLRAKEVARNLIEECGLPPSRLETVGMG 224
Query: 130 KEMPSVYGHDEDAYAKNRRAIV 151
+ P + +NRR
Sbjct: 225 ERFPFNEANPRAD--ENRRVEF 244
>gi|302035651|ref|YP_003795973.1| putative OmpA/MotB family outer membrane protein [Candidatus
Nitrospira defluvii]
gi|300603715|emb|CBK40046.1| putative Outer membrane protein, OmpA/MotB family [Candidatus
Nitrospira defluvii]
Length = 501
Score = 57.5 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 9/121 (7%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADEL-------GSR 95
+ ++ ++ F ++ P +L + + D + GH D +
Sbjct: 357 LTVALDSNLLFTWGDAALSPEGATILKRIGAVLGQLPDKFVQVAGHTDNQALSKTLQKTF 416
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI-VFLK 154
+ AL RA V GI A + K P E KNRR + ++
Sbjct: 417 PDNKALSWARAENARRALVNGGIPADKTKAVGLADTRPLTSNATEQGRQKNRRLELIIVQ 476
Query: 155 G 155
G
Sbjct: 477 G 477
>gi|258624664|ref|ZP_05719599.1| lateral flagellar MotY-like protein [Vibrio mimicus VM603]
gi|258583056|gb|EEW07870.1| lateral flagellar MotY-like protein [Vibrio mimicus VM603]
Length = 366
Score = 57.5 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 44/104 (42%), Gaps = 2/104 (1%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
++F ++ L L ++ + L++G+ D +G +++ + +RA +
Sbjct: 239 IYFAFGQRTLSNEQKMRLRALYRYIVEDSRVNTVLVDGYTDNVGPSVANLTISRQRAELI 298
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G++ +++V ++G P AKNRR + L
Sbjct: 299 AKELNRLGLAEEKVEVRAHGLRYPVASNDTAAGQAKNRRVTLRL 342
>gi|218262635|ref|ZP_03477017.1| hypothetical protein PRABACTJOHN_02696 [Parabacteroides johnsonii
DSM 18315]
gi|218223264|gb|EEC95914.1| hypothetical protein PRABACTJOHN_02696 [Parabacteroides johnsonii
DSM 18315]
Length = 663
Score = 57.5 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 36/180 (20%), Positives = 67/180 (37%), Gaps = 33/180 (18%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG-----DSVFFDTSSYSIRPADIQ 67
+ M S G N + ++ + NE+ + + F S + +++F+D ++RP +
Sbjct: 482 VMMASARGYLNQNFELKTGPEEKNETYIVDFFLSPISKPVVIENIFYDFDKATLRPESKK 541
Query: 68 VLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT 126
L + + + + H D GS + L RRA +V +Y +A GI+ R++
Sbjct: 542 ALDEMIKMLNDNPNVTIELGAHTDRKGSEQYNERLAQRRAQSVVDYLIAGGIAQDRLEAK 601
Query: 127 SYGKEMPSVYGH---------------DED------------AYAKNRRAIVFLKGCRAN 159
YG+ +P E+ A NRR + N
Sbjct: 602 GYGESVPKTINKKMAKNYDFLNEGDVLTEEFIDKLTPEQQEIADQINRRTEFKVLRTNYN 661
>gi|108563226|ref|YP_627542.1| flagellar motor protein MotB [Helicobacter pylori HPAG1]
gi|107836999|gb|ABF84868.1| flagellar motor rotation protein [Helicobacter pylori HPAG1]
Length = 257
Score = 57.5 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 51/152 (33%), Gaps = 7/152 (4%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS-SYSIRPADIQV 68
+++ + S I+ + + + ++ F+ + S SI +
Sbjct: 82 MASESSKPASQNTETKAIIARKGEGSVLEQIDQGSILKLPSNLLFENATSDSINQDMMLY 141
Query: 69 LSNLGSWLEKHDCDFLIE--GHADELG----SRNSSIALGLRRAYAVFNYFVARGISASR 122
+ + ++K I G D S L RAY V + G++ ++
Sbjct: 142 IERIAKIIQKLPKRVHINVRGFTDNTPLVKTRFKSHYELAANRAYRVMKVLIQYGVNPNQ 201
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ +SYG P + KN R +F
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEIFFS 233
>gi|134288289|ref|YP_001110452.1| OmpA/MotB domain-containing protein [Burkholderia vietnamiensis G4]
gi|134132939|gb|ABO59649.1| OmpA/MotB domain protein [Burkholderia vietnamiensis G4]
Length = 202
Score = 57.5 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 6/123 (4%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGH 88
E+ L + + +S LS++ + D + GH
Sbjct: 78 DEAQLAAEEAKLNSDTEQGNRVVLHYRFNSAIPT--SWAPLSSIVTRARGDDSPIKVVGH 135
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
ADE+G + + L +RRA AV NY VA+G++ +R++ +GK P G A+NRR
Sbjct: 136 ADEVGGDDYNQRLSVRRATAVSNYLVAKGVARNRIESEGHGKREPVSPGAG----AQNRR 191
Query: 149 AIV 151
++
Sbjct: 192 VVI 194
>gi|311746464|ref|ZP_07720249.1| putative flagellar motor protein MotB [Algoriphagus sp. PR1]
gi|126575359|gb|EAZ79691.1| putative flagellar motor protein MotB [Algoriphagus sp. PR1]
Length = 282
Score = 57.5 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 48/136 (35%), Gaps = 6/136 (4%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCD 82
+T + + + Q SV D + F+T SY I +L L + +
Sbjct: 136 TETTVDGEEDDVQIDIDQTVVMISVSDKLLFNTGSYRINKKADPLLQKLAEVINAEPSLQ 195
Query: 83 FLIEGHAD----ELGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVYG 137
+IEGH D G + L ++RA ++ +M MP V
Sbjct: 196 VMIEGHTDPRSISTGVLQDNWDLSVKRATSIVRKLQENYSVAPEKMIAAGRSSYMPLVEN 255
Query: 138 HDEDAYAKNRRAIVFL 153
+ A NRR + L
Sbjct: 256 DTPENMAINRRTRIVL 271
>gi|311745705|ref|ZP_07719490.1| putative thrombospondin type 3 repeat:OmpA/MotB [Algoriphagus sp.
PR1]
gi|311302419|gb|EAZ79498.2| putative thrombospondin type 3 repeat:OmpA/MotB [Algoriphagus sp.
PR1]
Length = 426
Score = 57.5 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 57/126 (45%), Gaps = 5/126 (3%)
Query: 33 TVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGH 88
V + ++ D +V++ S + + ++++K+ + ++G+
Sbjct: 302 PVEEVVEQVDFLQKAINDGYINVYYAFDSDKPLGYSTSAANYVANFMKKNPGVNVEVKGY 361
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
ADELG + ++ L RRA AV++ +A G+ SR+ YG++ DA RR
Sbjct: 362 ADELGPEDYNMKLSERRAKAVYDLLIASGVDGSRLSYKGYGEDTSVDK-SSADARQMARR 420
Query: 149 AIVFLK 154
A +K
Sbjct: 421 ASFEVK 426
>gi|87121335|ref|ZP_01077225.1| probable outer membrane protein [Marinomonas sp. MED121]
gi|86163492|gb|EAQ64767.1| probable outer membrane protein [Marinomonas sp. MED121]
Length = 298
Score = 57.5 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNSSIALGLRRAYA 108
+V F + + L + ++ I+GH D LGSR + L +RA A
Sbjct: 189 AVLFPENGVLLSTRMKDRLDLVALYVANDPSVEYIYIDGHTDSLGSRRDNRELSKQRAEA 248
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
V Y + +G+ ++ +G+ P++ +NRR + L+
Sbjct: 249 VTAYLLEQGVEVEKIISRYHGERYPTIDNKTRANRERNRRVTIRLE 294
>gi|219684669|ref|ZP_03539612.1| flagellar motor apparatus [Borrelia garinii PBr]
gi|219672031|gb|EED29085.1| flagellar motor apparatus [Borrelia garinii PBr]
Length = 260
Score = 57.5 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 45/138 (32%), Gaps = 15/138 (10%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSY----SIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ + S+ FFD++S IQ +++ L +F IE
Sbjct: 109 QSKNIMVRQEERGIVISLAADAFFDSASADVKLEDNRDSIQKIASFIGVLSSRGYNFKIE 168
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGI-----------SASRMKVTSYGKEMPSV 135
GH D + + + A + + I ++ +V+ +G P
Sbjct: 169 GHTDNIDTDVNGPWKSNWELSAARSVNMLEHILNYLDQSNVKSIENKFEVSGFGGSRPIA 228
Query: 136 YGHDEDAYAKNRRAIVFL 153
+ A NRR + +
Sbjct: 229 TDDTPEGRAYNRRIDILI 246
>gi|15645435|ref|NP_207609.1| flagellar motor protein MotB [Helicobacter pylori 26695]
gi|3024164|sp|P56427|MOTB_HELPY RecName: Full=Motility protein B; AltName: Full=Chemotaxis protein
MotB
gi|2313948|gb|AAD07865.1| flagellar motor rotation protein (motB) [Helicobacter pylori 26695]
Length = 257
Score = 57.5 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/152 (15%), Positives = 52/152 (34%), Gaps = 7/152 (4%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS-SYSIRPADIQV 68
+++ + S I+ + + + ++ F+ + S +I +
Sbjct: 82 MASESSKPASQNTETKATIARKGEGSVLEQIDQGSILKLPSNLLFENATSDAINQDMMLY 141
Query: 69 LSNLGSWLEKHDCDFLIE--GHADELG----SRNSSIALGLRRAYAVFNYFVARGISASR 122
+ + ++K I G D+ S L RAY V + G++ ++
Sbjct: 142 IERIAKIIQKLPKRVHINVRGFTDDTPLVKTRFKSHYELAANRAYRVMKVLIQYGVNPNQ 201
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ +SYG P + KN R +F
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEIFFS 233
>gi|188527339|ref|YP_001910026.1| flagellar motor protein MotB [Helicobacter pylori Shi470]
gi|188143579|gb|ACD47996.1| flagellar motor protein MotB [Helicobacter pylori Shi470]
Length = 255
Score = 57.5 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/152 (15%), Positives = 52/152 (34%), Gaps = 7/152 (4%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS-SYSIRPADIQV 68
+++ + S I+ + + + ++ F+ + S +I +
Sbjct: 82 MASESSKPASQNTETKATIARKGEGSVLEQIDQGSILKLPSNLLFENATSDAINQDMMLY 141
Query: 69 LSNLGSWLEKHDCDFLIE--GHADELG----SRNSSIALGLRRAYAVFNYFVARGISASR 122
+ + ++K I G D+ S L RAY V + G++ ++
Sbjct: 142 IERIAKIIQKLPKRVHINVRGFTDDTPLDKTRFKSHYELAANRAYRVMKVLIQYGVNPNQ 201
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ +SYG P + KN R +F
Sbjct: 202 LSFSSYGSTNPIAPNDSLENRMKNNRVEIFFS 233
>gi|285803774|pdb|3LDT|A Chain A, Crystal Structure Of An Outer Membrane Protein(Ompa)from
Legionella Pneumophila
Length = 169
Score = 57.5 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 41/105 (39%), Gaps = 1/105 (0%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRA 106
+ +F SS + L+N+ L + + G D +GSR+ L +A
Sbjct: 52 IPTDKYFXFSSPRLNEICYPGLNNVIRLLNFYPQSTIYVAGFTDNVGSRSHKRKLSQAQA 111
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ A GI+A R+K YG + A+NRR +
Sbjct: 112 ETXXTFLWANGIAAKRLKAEGYGDKNAISDNAIIHGSAQNRRIEI 156
>gi|261253024|ref|ZP_05945597.1| outer membrane protein [Vibrio orientalis CIP 102891]
gi|260936415|gb|EEX92404.1| outer membrane protein [Vibrio orientalis CIP 102891]
Length = 279
Score = 57.5 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 49/123 (39%), Gaps = 1/123 (0%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNS 97
+ ++ + + F +S I P + L+ + + + GHAD +G +
Sbjct: 145 ATIDELYNLLNVDNQFAFNSTEINPKYMGHLAEASNILKQHPQFHLAVTGHADSVGDVSY 204
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
+ L + RA V Y G+S SR++ S G +P G + NRR + +
Sbjct: 205 NQELAMGRAQQVKRYLTIFGLSPSRIQTKSVGDTLPLYEGDSDGVRLTNRRVSIEVIDTE 264
Query: 158 ANT 160
T
Sbjct: 265 EKT 267
>gi|258545495|ref|ZP_05705729.1| outer membrane protein A (outer membrane protein II)
[Cardiobacterium hominis ATCC 15826]
gi|258519195|gb|EEV88054.1| outer membrane protein A (outer membrane protein II)
[Cardiobacterium hominis ATCC 15826]
Length = 324
Score = 57.5 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 43/120 (35%), Gaps = 13/120 (10%)
Query: 53 FFDTSSYSIRPADIQVLSNLGS---WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
F + SI P + L + + I+G+ D G + L RRA V
Sbjct: 205 FDRSDYASILPEGKRQLQEIAAAAAQYRDATSVIYIDGYTDPEGKPAYNQRLSQRRAQTV 264
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYG------HDEDAYAK----NRRAIVFLKGCRAN 159
+ G A+ +K +G+ P V G + A A NRR + L G +
Sbjct: 265 KRVMIENGFPAASLKARGHGENDPVVTGCRKRNPRNASARAACDQPNRRVEIKLYGKNMH 324
>gi|300870393|ref|YP_003785264.1| flagellar motor protein MotB [Brachyspira pilosicoli 95/1000]
gi|300688092|gb|ADK30763.1| flagellar motor protein MotB [Brachyspira pilosicoli 95/1000]
Length = 266
Score = 57.5 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 44/132 (33%), Gaps = 15/132 (11%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSI--RPADIQVLSNLGSWLEKHDCDFLIEGHADE--- 91
S + F ++G +F+++S +I + + + S L D IEGH D
Sbjct: 124 VSEDERGFVITLGADQYFESASTNIVNTQNNTETFIKIASVLSTLPNDIRIEGHTDSGAI 183
Query: 92 ------LGSRNSSIALGLRRAYAVFNYFVARGISA----SRMKVTSYGKEMPSVYGHDED 141
++ L RA V + ++ V Y P D
Sbjct: 184 LEGSITEQWFGNNWGLSTARAIVVLEKLFESDQTGKLDINKYSVAGYADTRPVASNDLPD 243
Query: 142 AYAKNRRAIVFL 153
A NRR + +
Sbjct: 244 GRALNRRVDIVV 255
>gi|298528936|ref|ZP_07016339.1| OmpA/MotB domain protein [Desulfonatronospira thiodismutans ASO3-1]
gi|298510372|gb|EFI34275.1| OmpA/MotB domain protein [Desulfonatronospira thiodismutans ASO3-1]
Length = 223
Score = 57.5 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 21/138 (15%), Positives = 42/138 (30%), Gaps = 5/138 (3%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
+ + V + + Q S+ VFF S + P + L + +
Sbjct: 83 TQAREKLSTPGAPVSVKMTEQGSVLISLFGEVFFSPGSADLNPESNKYLQQIAEIVSLAQ 142
Query: 81 CDFLIEGHADELGSRNSS----IALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSV 135
+ G D + + RA + +RG+ + + +G P V
Sbjct: 143 GQVKVAGFTDSRENSVQGDRSIFEISAMRAARIGEELTRSRGLRQENLVIQGHGTPRPQV 202
Query: 136 YGHDEDAYAKNRRAIVFL 153
+ NRR + +
Sbjct: 203 PENSPVGSEMNRRVEIRI 220
>gi|219685751|ref|ZP_03540562.1| flagellar motor apparatus [Borrelia garinii Far04]
gi|219672690|gb|EED29718.1| flagellar motor apparatus [Borrelia garinii Far04]
Length = 260
Score = 57.5 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 45/138 (32%), Gaps = 15/138 (10%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSY----SIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ + S+ FFD++S IQ +++ L +F IE
Sbjct: 109 QSKNIMVRQEERGIVISLAADAFFDSASADVKLEDNRDSIQKIASFIGVLSSRGYNFKIE 168
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGI-----------SASRMKVTSYGKEMPSV 135
GH D + + + A + + I ++ +V+ +G P
Sbjct: 169 GHTDNIDTDVNGPWKSNWELSAARSVNMLEHILNYLDQSNVKSIENKFEVSGFGGSRPIA 228
Query: 136 YGHDEDAYAKNRRAIVFL 153
+ A NRR + +
Sbjct: 229 TDDTPEGRAYNRRIDILI 246
>gi|163789576|ref|ZP_02184014.1| Flagellar motor protein [Carnobacterium sp. AT7]
gi|159875108|gb|EDP69174.1| Flagellar motor protein [Carnobacterium sp. AT7]
Length = 61
Score = 57.5 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 9/40 (22%), Positives = 16/40 (40%)
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
R+ V YG+ P ++ +NRR + + N
Sbjct: 15 PKRVSVVGYGEYRPKADNKTKEGRLENRRVDILILNSEYN 54
>gi|121604226|ref|YP_981555.1| OmpA/MotB domain-containing protein [Polaromonas naphthalenivorans
CJ2]
gi|120593195|gb|ABM36634.1| OmpA/MotB domain protein [Polaromonas naphthalenivorans CJ2]
Length = 376
Score = 57.5 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 51/140 (36%), Gaps = 7/140 (5%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+ I+ ++ ++ + F S +R ++ +
Sbjct: 227 AAIEPAPQVVAIAPPQPPPPPAPRFEKYTLSATELFAFDSTGLRMPQPRLDEIAAALGSH 286
Query: 79 HDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+ + +I G+ D +GS + L RRA AV Y +GI A+R+K G+ P V
Sbjct: 287 GEVNEVVITGYTDRIGSSQYNQKLSERRALAVKTYLTGKGIDANRLKAQGKGEADPVVAC 346
Query: 138 HDE------DAYAKNRRAIV 151
D+ NRR V
Sbjct: 347 TDKKLPALIKCLEPNRRVEV 366
>gi|323499085|ref|ZP_08104065.1| outer membrane protein [Vibrio sinaloensis DSM 21326]
gi|323315920|gb|EGA68951.1| outer membrane protein [Vibrio sinaloensis DSM 21326]
Length = 278
Score = 57.5 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 49/120 (40%), Gaps = 1/120 (0%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNS 97
++ +Q + + F +S I P + L+ + E + GHAD +G
Sbjct: 145 AVIDQLFNLLNIDNQFAFNSAEINPKYMGHLAKAANILTEHPSLALSVTGHADSVGDIEY 204
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
+ L + RA V Y G+S +R++ S G +P G E NRR + + +
Sbjct: 205 NQNLAMDRAQQVKRYLSIFGLSPTRIETHSVGDTLPLYEGESEGVRLTNRRVSIEVVDTQ 264
>gi|298530631|ref|ZP_07018033.1| OmpA/MotB domain protein [Desulfonatronospira thiodismutans ASO3-1]
gi|298510005|gb|EFI33909.1| OmpA/MotB domain protein [Desulfonatronospira thiodismutans ASO3-1]
Length = 274
Score = 57.5 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 47/121 (38%), Gaps = 14/121 (11%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD--------------EL 92
S+ + ++ + I+VL + L+ + L+ GH +
Sbjct: 119 SINTELLYEPGETELSSEGIEVLDKVVPVLKDLEYPVLLAGHTSLVRDEFGAGWQALKDD 178
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
N + L L RA V+ Y + +G+ +++ ++G+ P E +NRR +
Sbjct: 179 VIINPTWRLSLDRALNVYRYIMEQGVDPEMVRLEAFGEFQPRYGTRTEANRRQNRRVEIV 238
Query: 153 L 153
L
Sbjct: 239 L 239
>gi|198275312|ref|ZP_03207843.1| hypothetical protein BACPLE_01473 [Bacteroides plebeius DSM 17135]
gi|198271895|gb|EDY96165.1| hypothetical protein BACPLE_01473 [Bacteroides plebeius DSM 17135]
Length = 238
Score = 57.5 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 12/144 (8%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW--L 76
+ + + + V + + LQ + + F+TSS ++ + LS +
Sbjct: 78 AAAQAEQIEGAQVEQVTDNNGLQA-VKVTFDSGILFNTSSATLSSSAKSALSKFANNVLN 136
Query: 77 EKHDCDFLIEGHADEL--------GSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTS 127
+ D D I G+ D SR ++ L RA +V +Y +A G S+S++ VT
Sbjct: 137 QNKDMDVAIYGYTDNTGWKNSTAEQSRQKNLDLSQERAQSVSSYLLACGASSSQIKSVTG 196
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIV 151
G+E P +NRR V
Sbjct: 197 MGEENPVADNSTAAGRQENRRVEV 220
>gi|114562634|ref|YP_750147.1| OmpA/MotB domain-containing protein [Shewanella frigidimarina NCIMB
400]
gi|114333927|gb|ABI71309.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400]
Length = 289
Score = 57.5 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 34/71 (47%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
LI+ + D G R+ + + +RA +V + +A GI R+ + +G++ +
Sbjct: 215 VLIDAYTDSYGGRSVNQKVSDKRADSVKDILIASGIPKDRIHTSGHGEKRHVTGNDLAEE 274
Query: 143 YAKNRRAIVFL 153
NRR ++ +
Sbjct: 275 RKMNRRVVIKI 285
>gi|124386037|ref|YP_001026945.1| OmpA family protein [Burkholderia mallei NCTC 10229]
gi|217420891|ref|ZP_03452396.1| outer membrane protein A [Burkholderia pseudomallei 576]
gi|217396303|gb|EEC36320.1| outer membrane protein A [Burkholderia pseudomallei 576]
Length = 179
Score = 57.5 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 33/156 (21%), Positives = 62/156 (39%), Gaps = 11/156 (7%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS 70
A G +P + + ++ + FD ++PA Q L
Sbjct: 16 PATANAKCDGALVAQAPAPAPVAPVAPAITSQK--ITYQADTLFDFDKAVLKPAGKQKLD 73
Query: 71 NLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
L + ++ + + ++ G+ D +GS + L LRRA AV +Y V++G+ A+++ G
Sbjct: 74 ELAAKIQGMNVEVVVATGYTDRIGSDKYNDRLSLRRAQAVKSYLVSKGVPANKVYTEGKG 133
Query: 130 KEMPSVYGHDE--------DAYAKNRRAIVFLKGCR 157
K P + A +RR V + G +
Sbjct: 134 KRNPVTGNTCKQKNRKQLIACLAPDRRVEVEVVGTQ 169
>gi|224532213|ref|ZP_03672845.1| flagellar motor apparatus [Borrelia valaisiana VS116]
gi|224511678|gb|EEF82084.1| flagellar motor apparatus [Borrelia valaisiana VS116]
Length = 260
Score = 57.5 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 48/138 (34%), Gaps = 15/138 (10%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSY----SIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ + S+ FFD++S IQ +++ L +F IE
Sbjct: 109 QSKNIIVRQEERGIVISLAADAFFDSASADVKLEDNRDSIQKIASFIGVLSSRGYNFKIE 168
Query: 87 GHADELGS-----RNSSIALGLRRAYAVFNYFVARGISAS------RMKVTSYGKEMPSV 135
GH D + + ++ L R+ + + + ++ + +V +G P
Sbjct: 169 GHTDNIDTDVNGPWKNNWELSTARSVNMLEHILNYLDQSNVKSIENKFEVAGFGGSRPIA 228
Query: 136 YGHDEDAYAKNRRAIVFL 153
+ A NRR + +
Sbjct: 229 TDDTPEGRAYNRRIDILI 246
>gi|221369495|ref|YP_002520591.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides KD131]
gi|221162547|gb|ACM03518.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides KD131]
Length = 254
Score = 57.5 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 44/139 (31%), Gaps = 9/139 (6%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQF-----SSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
G D L P+ E F + V + F S + +L+ L +
Sbjct: 114 GADRLAAADPPPEGRETAEVTPESFGLLDPALQVNVRIHFAFDSAVLASDQTPLLAQLCT 173
Query: 75 WLEKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEM 132
++ D I GH D GS + L L RA V Y R++ G+
Sbjct: 174 VMKASDIRLFQIVGHTDAAGSEAYNQQLSLLRAEEVRRYLTGPCGIAPERLRAVGMGERF 233
Query: 133 PSVYGHDEDAYAKNRRAIV 151
+ +NRR
Sbjct: 234 L--TNQSDPRSGENRRVEF 250
>gi|182414999|ref|YP_001820065.1| OmpA/MotB domain-containing protein [Opitutus terrae PB90-1]
gi|177842213|gb|ACB76465.1| OmpA/MotB domain protein [Opitutus terrae PB90-1]
Length = 197
Score = 57.5 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 55/133 (41%), Gaps = 3/133 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD- 80
+D + + + + V+FD I+ A+ L ++++H
Sbjct: 51 APVDASAAGLEQRDPNIIEDANSIRGMFEPVYFDFDKSDIKQAERAKLQKAADYMKQHPE 110
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
L+EGH D G+ ++ LG RRA A Y + A R++ S G + D+
Sbjct: 111 QRILLEGHCDWRGTAEYNLGLGDRRANAAKRYLSSLAP-AERIETLSKGSLD-AAQNGDD 168
Query: 141 DAYAKNRRAIVFL 153
A AK+RR + +
Sbjct: 169 AAMAKDRRVDIVI 181
>gi|330815889|ref|YP_004359594.1| OmpA/MotB domain protein [Burkholderia gladioli BSR3]
gi|327368282|gb|AEA59638.1| OmpA/MotB domain protein [Burkholderia gladioli BSR3]
Length = 218
Score = 57.5 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 56/120 (46%), Gaps = 8/120 (6%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FD +++P Q L L + ++ + + ++ G+ D +GS + L LR
Sbjct: 95 ITYQADALFDFDKATLKPLGKQKLDELAAKIQGMNVEVVVATGYTDRIGSDKYNDRLSLR 154
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY-------AKNRRAIVFLKGCR 157
RA AV +Y V++G+ +S++ GK P G ++ A +RR V + G +
Sbjct: 155 RAQAVKSYLVSKGVESSKVYTEGKGKRNPVTTGCNQKNRKQLIACLAPDRRVEVEVVGTQ 214
>gi|238026527|ref|YP_002910758.1| OmpA/MotB domain-containing protein [Burkholderia glumae BGR1]
gi|237875721|gb|ACR28054.1| OmpA/MotB domain protein [Burkholderia glumae BGR1]
Length = 218
Score = 57.5 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 56/120 (46%), Gaps = 8/120 (6%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FD +++P Q L L + ++ + + ++ G+ D +GS + L LR
Sbjct: 95 ITYQADALFDFDKATLKPLGKQKLDELAAKIQGMNVEVVVATGYTDRIGSDKYNDRLSLR 154
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY-------AKNRRAIVFLKGCR 157
RA AV +Y V++G+ +S++ GK P G ++ A +RR V + G +
Sbjct: 155 RAQAVKSYLVSKGVESSKVYTEGKGKRNPVTTGCNQKNRKQLIACLAPDRRVEVEVVGTQ 214
>gi|197122876|ref|YP_002134827.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K]
gi|196172725|gb|ACG73698.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K]
Length = 259
Score = 57.5 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 50/130 (38%), Gaps = 6/130 (4%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
P V++ + + + + FFD ++RP + +L + + + + +EGH D
Sbjct: 115 PVPVVSVLVEGRRLTVRLAATEFFDPGQAALRPQALALLDAIAAEVVPLERPLRVEGHTD 174
Query: 91 ELG-----SRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
E S+ L RA V Y A + + G P +A+
Sbjct: 175 ETPVGSGGRWMSNWELSAARAATVVGYLEQAHAARPALLAAVGLGSAHPLSTDATPEAHE 234
Query: 145 KNRRAIVFLK 154
+NRR + L+
Sbjct: 235 RNRRVELVLE 244
>gi|163793574|ref|ZP_02187549.1| OmpA/MotB [alpha proteobacterium BAL199]
gi|159181376|gb|EDP65891.1| OmpA/MotB [alpha proteobacterium BAL199]
Length = 293
Score = 57.5 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 53/149 (35%), Gaps = 3/149 (2%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDT--SSYSIRPADI 66
L A +++ G+ V +V + P
Sbjct: 145 SLRASAVVAAGGVAPDAAGTLGERDVREIFGGALGAEPPAPITVLLYFEVGGNVLTPESQ 204
Query: 67 QVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
L L + + I GH D +G+ + + AL LRRA V + GIS ++V
Sbjct: 205 ASLPTLLEIIRQRVLPGVEIAGHTDRVGASSVNDALALRRAELVQQMMLDLGISRRLIRV 264
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
S+G+ P V D +NRR + ++
Sbjct: 265 DSFGERDPVVPTADGVDEPRNRRVEITVR 293
>gi|148475217|dbj|BAF63174.1| major outer membrane protein OmpAI [Aeromonas veronii]
Length = 340
Score = 57.5 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 58/147 (39%), Gaps = 12/147 (8%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKH 79
+ + + + ++ V F +++P + L+ L +
Sbjct: 190 VAPVAAPVVEEAPAPAPQVVEKNFALNSDVLFAFGKDTLKPEGVAALNGLYQQIVEFQPK 249
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS----V 135
D + ++ G+ D +GS + L RA V N+ V++G++AS++ + G+ P
Sbjct: 250 DGNAVVVGYTDRIGSDAYNQKLSEARARTVANFLVSKGMAASKVAIEGRGEANPVTGTKC 309
Query: 136 YGHDEDAY-----AKNRRAIVFLKGCR 157
G A A +RR V + G +
Sbjct: 310 NGVTAKAQLISCLAPDRRVEVRVSGVQ 336
>gi|118578838|ref|YP_900088.1| OmpA/MotB domain-containing protein [Pelobacter propionicus DSM
2379]
gi|118501548|gb|ABK98030.1| OmpA/MotB domain protein [Pelobacter propionicus DSM 2379]
Length = 687
Score = 57.5 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 56/137 (40%), Gaps = 3/137 (2%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK-H 79
+ + K++ ++ ++Q + FD + ++ + ++++ + + +
Sbjct: 546 VSSEPIKVNFSQVSQRQTQKKDQNVQEKYALILFDFNKDTVSGLNQEIVNKIVTRFKSLP 605
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA--SRMKVTSYGKEMPSVYG 137
I GH D +GS + ++ L RRA AV+ A R++ + G+ P
Sbjct: 606 QASMSIVGHTDNIGSESYNLKLSQRRAAAVYKLLTAAYGEPVGERIRFSGVGQGSPLFDN 665
Query: 138 HDEDAYAKNRRAIVFLK 154
+ A NR + L+
Sbjct: 666 QTPEGRAFNRTVTITLE 682
Score = 44.4 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 19/95 (20%), Positives = 32/95 (33%), Gaps = 2/95 (2%)
Query: 60 SIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI 118
Q+L+ +G L + G D G+ L RRA AV Y
Sbjct: 355 DTTEKYHQILNIIGKRLADTPGATITLVGCNDNSGAEKGKTGLSTRRAEAVKTYLGTIWN 414
Query: 119 S-ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
R+++ + ++ A+NRR +
Sbjct: 415 IAPERIRIEARNLPKMPSSSSSQEGQAENRRVEIV 449
>gi|329114380|ref|ZP_08243142.1| Outer membrane protein [Acetobacter pomorum DM001]
gi|326696456|gb|EGE48135.1| Outer membrane protein [Acetobacter pomorum DM001]
Length = 452
Score = 57.5 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 38/111 (34%), Gaps = 8/111 (7%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRN-------SSIALGL 103
VFFD + ++ + G+ D + ++ L L
Sbjct: 342 VFFDWDKSDLTDRARSIVGVAAQAAAHVALTRITVSGYTDNSSAHPGQKAGEEYNMRLSL 401
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RRA V + G+ + + + YG+ P V A+NRR + +
Sbjct: 402 RRAEVVKAELMRDGVPGTTIDIHGYGETHPLVTTGPNTKEAQNRRVEIIFR 452
>gi|325105157|ref|YP_004274811.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
gi|324974005|gb|ADY52989.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
Length = 587
Score = 57.5 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 6/112 (5%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRA 106
V + +D +IRP +L N+ S ++++ + H D G+ ++ L RA
Sbjct: 471 VLKDIHYDFDKSNIRPDAALILDNVVSIMKQNPSLKIELSSHTDCRGNNAYNLILSDARA 530
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHD-----EDAYAKNRRAIVFL 153
+ Y V GI +R+ YG+ +D E + +NRR + +
Sbjct: 531 RSAVAYIVRNGIEKNRLVAKGYGETKLLNNCYDGVRCSEVEHQRNRRTELRV 582
>gi|312114121|ref|YP_004011717.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100]
gi|311219250|gb|ADP70618.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100]
Length = 509
Score = 57.1 bits (136), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEK--HDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
F +S + +Q + L +L+ + D L+ G D G+ ++ AL L RA + N
Sbjct: 406 FHRNSAVLDDKAMQDVPRLARFLKSDANGKDLLLLGFTDGTGAFETNKALSLNRATSFKN 465
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
VA G+ A+++ V YG +P + + NRR V++K
Sbjct: 466 ALVAEGVPANKITVKGYGSLLPVGCNTSDAGQSANRRVEVWMK 508
>gi|117618437|ref|YP_858623.1| outer membrane protein A [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117559844|gb|ABK36792.1| outer-membrane protein A [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 368
Score = 57.1 bits (136), Expect = 7e-07, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 11/120 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
S+ V F+ + +++PA Q L NL S + + + GH D +GS + AL
Sbjct: 243 SLSSDVLFEFNKATLKPAASQALDNLFSQIVAANPKDGVATVIGHTDRIGSDAYNQALSE 302
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE--------DAYAKNRRAIVFLKG 155
+RA +V +Y +A+G+ A +++V GK P + A +RR V L+G
Sbjct: 303 QRARSVADYLIAKGLFADKVRVEGRGKSSPITGNNCSSGSKPALIACLAPDRRVEVRLEG 362
>gi|221134181|ref|ZP_03560486.1| hypothetical protein GHTCC_04568 [Glaciecola sp. HTCC2999]
Length = 303
Score = 57.1 bits (136), Expect = 7e-07, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 54/137 (39%), Gaps = 1/137 (0%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDF 83
+ + N+ Q + F T+S + + L+ ++ + F
Sbjct: 161 KEETVISEPARNQEDDFAQILLLLNADNQFATNSSEVNLKYVARLAQAVQIIQYYPQLQF 220
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
+ G DELG+ +++ALG RA V Y A GIS R+ V + G+ P G
Sbjct: 221 HVVGSTDELGNTENNMALGQARADGVARYLEAFGISMDRISVMTNGEANPLFPGDAPHIR 280
Query: 144 AKNRRAIVFLKGCRANT 160
NRR + L +T
Sbjct: 281 LTNRRVNITLSLKDNDT 297
>gi|254181081|ref|ZP_04887679.1| ompA family protein [Burkholderia pseudomallei 1655]
gi|254195586|ref|ZP_04902013.1| ompA family protein [Burkholderia pseudomallei S13]
gi|169652332|gb|EDS85025.1| ompA family protein [Burkholderia pseudomallei S13]
gi|184211620|gb|EDU08663.1| ompA family protein [Burkholderia pseudomallei 1655]
Length = 188
Score = 57.1 bits (136), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 9/121 (7%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FD ++PA Q L L + ++ + + ++ G+ D +GS + L LR
Sbjct: 58 ITYQADTLFDFDKAVLKPAGKQKLDELAAKIQGMNVEVVVATGYTDRIGSDKYNDRLSLR 117
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE--------DAYAKNRRAIVFLKGC 156
RA AV +Y V++G+ A+++ GK P + A +RR V + G
Sbjct: 118 RAQAVKSYLVSKGVPANKVYTEGKGKRNPVTGNTCKQKNRKQLIACLAPDRRVEVEVVGT 177
Query: 157 R 157
+
Sbjct: 178 Q 178
>gi|260778741|ref|ZP_05887633.1| outer membrane protein [Vibrio coralliilyticus ATCC BAA-450]
gi|260604905|gb|EEX31200.1| outer membrane protein [Vibrio coralliilyticus ATCC BAA-450]
Length = 279
Score = 57.1 bits (136), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 50/116 (43%), Gaps = 1/116 (0%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNS 97
++ ++ + + F +S + P + L+ + L +H + + GHAD +G
Sbjct: 145 AIIDKLYNLLNVDNQFAFNSTEVNPKYMGHLAQAANILREHKSLNLTVTGHADSVGDELQ 204
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L + RA V Y G+ R++ S G+ +P G + NRR + +
Sbjct: 205 NQQLAMGRAKQVKRYLTIFGLEPKRIEAKSLGESLPLFEGESDGVRLTNRRVSIEV 260
>gi|189179676|dbj|BAG39457.1| outer membrane protein [Gluconacetobacter intermedius]
Length = 373
Score = 57.1 bits (136), Expect = 7e-07, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 43/109 (39%), Gaps = 7/109 (6%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRN------SSIALGLR 104
VFFD ++ ++++ + G+ D + ++ L +R
Sbjct: 264 VFFDWDGAALTGRSREIVAEAAQASTHVQTTRIEVNGYTDNTSAHPGPRGEKYNLGLSMR 323
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA +V + G+ A+ + V YG+ P V + +NRR + L
Sbjct: 324 RADSVKAELIRDGVPANAIDVHGYGEAHPLVPTGPDTREPQNRRVEIIL 372
>gi|126661868|ref|ZP_01732867.1| outer membrane protein, OmpA family [Flavobacteria bacterium BAL38]
gi|126625247|gb|EAZ95936.1| outer membrane protein, OmpA family [Flavobacteria bacterium BAL38]
Length = 274
Score = 57.1 bits (136), Expect = 7e-07, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 41/128 (32%), Gaps = 4/128 (3%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEG 87
+ + + F+ + ++ + + L + I+G
Sbjct: 144 PEDATLAEKVKLSKVGMKIVLKNINFYQNTFATMPESQGTLYDLLFIMQNNPELKIEIQG 203
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK 145
H + + L RA + + V GI R+K +G P + + A+
Sbjct: 204 HICCIDKDYRN--LSTDRAKQIKRFLVYNGIQDYRVKTKGFGVSQPIHPIPEATPEQAAE 261
Query: 146 NRRAIVFL 153
NRR + +
Sbjct: 262 NRRVEIEI 269
>gi|90579127|ref|ZP_01234937.1| hypothetical protein VAS14_05458 [Vibrio angustum S14]
gi|90439960|gb|EAS65141.1| hypothetical protein VAS14_05458 [Vibrio angustum S14]
Length = 166
Score = 57.1 bits (136), Expect = 7e-07, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNS 97
+L+E + FD ++P DI+ L + + ++ D LI GH D GS +
Sbjct: 47 KTLEEDKKIYLSLISHFDFDKAVLKPEDIKELDDFIAKIQLLSGDILIAGHTDYQGSDSY 106
Query: 98 SIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRR 148
+ AL LRR++ + Y AR + +V +G++ P V GH A A NRR
Sbjct: 107 NEALSLRRSHVIERYLKARIDESHYHFEVKYFGEKNPIVKGHSLKANALNRR 158
>gi|152995560|ref|YP_001340395.1| OmpA/MotB domain-containing protein [Marinomonas sp. MWYL1]
gi|150836484|gb|ABR70460.1| OmpA/MotB domain protein [Marinomonas sp. MWYL1]
Length = 296
Score = 57.1 bits (136), Expect = 7e-07, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 2/104 (1%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNSSIALGLRRAYAVF 110
F T+ ++ L + ++ I+GH D +GSR + L RA V
Sbjct: 187 LFPTNGVNLTDRIKARLDLVALYVSSDPSVEYIYIDGHTDVIGSRRDNRELSKVRAEKVT 246
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+Y + +G+ A ++ +G+ PS + +NRR + L+
Sbjct: 247 SYLLEKGVPAGKIISRYHGERYPSTTNNTAQGRERNRRVTIRLE 290
>gi|254361857|ref|ZP_04977991.1| lipoprotein PlpD [Mannheimia haemolytica PHL213]
gi|3283200|gb|AAC32565.1| lipoprotein Plp4 [Mannheimia haemolytica]
gi|153093396|gb|EDN74387.1| lipoprotein PlpD [Mannheimia haemolytica PHL213]
Length = 284
Score = 57.1 bits (136), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 8/112 (7%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRR 105
++ FD ++ +V+ N+ L+ + G+ D LGS ++ L RR
Sbjct: 140 ALTGDFLFDFDKATLTTKGKEVVDNVAQQLKASKAQQVKVAGYTDRLGSAAYNLDLSQRR 199
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK------NRRAIV 151
+ V V +G++A +++ YGK E A NRR +
Sbjct: 200 SNTVKARLVQQGVTA-QIEAVGYGKANQVKACDGETGQALKDCLRPNRRVEI 250
>gi|37704678|gb|AAR01611.1| OprF [Pseudomonas sp. MFY338]
Length = 315
Score = 57.1 bits (136), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 50/119 (42%), Gaps = 4/119 (3%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD ++P + NL ++++
Sbjct: 197 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQ 256
Query: 79 HDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSV 135
+ +EGH D +G + L RRA AV + + +SR++ YG+ P
Sbjct: 257 YPSTSTTVEGHTDSVGPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSVGYGESRPVA 315
>gi|90412653|ref|ZP_01220655.1| hypothetical protein P3TCK_08471 [Photobacterium profundum 3TCK]
gi|90326461|gb|EAS42873.1| hypothetical protein P3TCK_08471 [Photobacterium profundum 3TCK]
Length = 208
Score = 57.1 bits (136), Expect = 7e-07, Method: Composition-based stats.
Identities = 33/188 (17%), Positives = 70/188 (37%), Gaps = 38/188 (20%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSV-------------- 48
++ I++S + + + + + I + + N + +
Sbjct: 8 FTNFIILISCVFLFACTATSEQKSDIVTKKSQGNTENTTSSLNIYTSSNELNNSRNSAVV 67
Query: 49 ----------------------GDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLI 85
D ++FD +Y + + Q+L + L+ H D ++
Sbjct: 68 TDSITYTATPDASILLAQLPEQKDVIYFDNMNYELSVKNQQLLDPIALRLKLHLDSYLIV 127
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYA 144
GH+D+ GS+ ++ L RA++V Y + GI R+++ + G + G+ E
Sbjct: 128 IGHSDDAGSKEENLVLSFERAFSVAIYISSVFGIEEERIQIVALGDDELISNGNSEQERQ 187
Query: 145 KNRRAIVF 152
NRR V
Sbjct: 188 LNRRVEVI 195
>gi|295677286|ref|YP_003605810.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
gi|295437129|gb|ADG16299.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
Length = 215
Score = 57.1 bits (136), Expect = 7e-07, Method: Composition-based stats.
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 8/119 (6%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FD ++PA + LS L S ++ + + ++ GH D +GS + L LR
Sbjct: 94 ITYQADALFDFDKAILKPAGKERLSELASKIQGINLEVVVATGHTDRIGSDAYNDRLSLR 153
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY-------AKNRRAIVFLKGC 156
RA AV + V++G+ A+R+ G+ P G ++ A +RR V + G
Sbjct: 154 RAQAVKAFLVSKGVEANRIYTEGKGRRNPVTTGCNQKNRKQLIACLAPDRRVEVEVVGT 212
>gi|184216035|gb|ACC77464.1| outer membrane protein [Lawsonia intracellularis]
Length = 340
Score = 57.1 bits (136), Expect = 7e-07, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 39/109 (35%), Gaps = 2/109 (1%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQV-LSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGL 103
V V F S+++ + + D + + G D G ++ L
Sbjct: 230 EVVVLRGVNFAFDSFALDDTAKAISEETVRLIRANPDFNVRLLGWTDSTGPDAYNLRLSQ 289
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
RA AV N+ V GI ++R+ GK ++ NRR +
Sbjct: 290 ERADAVKNFLVKMGIPSNRLFAKGMGKSY-QYNNATKEGRYMNRRTELV 337
>gi|126730914|ref|ZP_01746723.1| OmpA family protein [Sagittula stellata E-37]
gi|126708630|gb|EBA07687.1| OmpA family protein [Sagittula stellata E-37]
Length = 198
Score = 57.1 bits (136), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 40/99 (40%), Gaps = 4/99 (4%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FF T SY I ++N + F+I GH D S ++ L RA AV
Sbjct: 100 FFATDSYKISKHGQAQIAN--FFRSSSAVGFVIAGHTDSRASDAYNMKLSYNRALAVARV 157
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
A G + + V YG+ MP AKNRR +
Sbjct: 158 ARAVGANIT--DVRGYGERMPVASNATAAGMAKNRRVEI 194
>gi|51598540|ref|YP_072728.1| flagellar motor protein MotB [Borrelia garinii PBi]
gi|51573111|gb|AAU07136.1| flagellar motor rotation protein B [Borrelia garinii PBi]
Length = 260
Score = 57.1 bits (136), Expect = 7e-07, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 45/138 (32%), Gaps = 15/138 (10%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSY----SIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ + S+ FFD++S IQ +++ L +F IE
Sbjct: 109 QSKNIMVRQEERGIVISLAADAFFDSASADVKLEDNRDSIQKIASFIGVLSSRGYNFKIE 168
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGI-----------SASRMKVTSYGKEMPSV 135
GH D + + + A + + I ++ +V+ +G P
Sbjct: 169 GHTDNIDTDVNGPWKSNWELSAARSVNMLEHILNYLDQSNVNSIENKFEVSGFGGSRPIA 228
Query: 136 YGHDEDAYAKNRRAIVFL 153
+ A NRR + +
Sbjct: 229 TDDTPEGRAYNRRIDILI 246
>gi|254486344|ref|ZP_05099549.1| flagellar motor protein [Roseobacter sp. GAI101]
gi|214043213|gb|EEB83851.1| flagellar motor protein [Roseobacter sp. GAI101]
Length = 598
Score = 57.1 bits (136), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 44/126 (34%), Gaps = 14/126 (11%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH--------DCDFLIEGHADELG 93
E V F + + + ++ + L D ++GH D
Sbjct: 470 EGDRFVFSSEVLFPPGAAQLSTDGQREIAKVAEILRNIAADIPPEIDWVIRVDGHTDNQP 529
Query: 94 -----SRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+ + L RA +V Y + GI+ R+ +G+ P G E A A+NR
Sbjct: 530 LSGLGAFADNWELSQARALSVVKYMINFLGIAPDRLAANGFGQYQPVAEGDSESARAQNR 589
Query: 148 RAIVFL 153
R + L
Sbjct: 590 RIELKL 595
>gi|254462893|ref|ZP_05076309.1| OmpA family protein [Rhodobacterales bacterium HTCC2083]
gi|206679482|gb|EDZ43969.1| OmpA family protein [Rhodobacteraceae bacterium HTCC2083]
Length = 219
Score = 57.1 bits (136), Expect = 7e-07, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 4/138 (2%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
G ++ L +F++ V +V F S + L +W+ +
Sbjct: 47 GNATMNNTQIMSGEKQYAYDLSARFANEVLTTVNFAFGSAQLDAGAHDTLREQAAWIRQF 106
Query: 80 D-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS-YGKEMPSVYG 137
F + GHAD +G S+ +LGL+RAYAV N+ A GI SR++ S +G+E P +
Sbjct: 107 PEVRFRVYGHADAVGGNASNKSLGLQRAYAVVNFLAANGIGKSRLEAVSSFGEEQPLIV- 165
Query: 138 HDEDAYAKNRRAIVFLKG 155
E +NRR + + G
Sbjct: 166 -SEGRERRNRRTVTEVSG 182
>gi|37704614|gb|AAR01579.1| OprF [Pseudomonas sp. MFY61]
Length = 316
Score = 57.1 bits (136), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 49/119 (41%), Gaps = 4/119 (3%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD ++P + NL ++++
Sbjct: 198 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQ 257
Query: 79 H-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSV 135
+ +EGH D +G + L RRA AV + + +SR+ YG+ P
Sbjct: 258 YPQTTTTVEGHTDSVGPDAYNQKLSERRANAVKQVLTQQYGVESSRIDSVGYGETRPVA 316
>gi|157377275|ref|YP_001475875.1| OmpA/MotB domain-containing protein [Shewanella sediminis HAW-EB3]
gi|157319649|gb|ABV38747.1| OmpA/MotB domain protein [Shewanella sediminis HAW-EB3]
Length = 201
Score = 57.1 bits (136), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 2/108 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIALGLRRAYAV 109
+ F SY I P + + +++ + IEGH + GS + ++ L RA AV
Sbjct: 76 KILFANDSYYIDPQYYDQIEVIATFMTDYPNTVVTIEGHCSKTGSYDHNLTLSQNRANAV 135
Query: 110 FNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
+ I+ R+ Y + P A+ +NRR I + G
Sbjct: 136 TTTLTEQFGINPDRLTAIGYSFDRPVDMSETSIAHTRNRRVIAEVTGE 183
>gi|302062033|ref|ZP_07253574.1| ompA family protein [Pseudomonas syringae pv. tomato K40]
Length = 380
Score = 57.1 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 28/69 (40%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
LI GHAD G + + RA +V F G+ +R+ G MP +
Sbjct: 214 VLILGHADTSGPTEGNQKISQERAQSVAAIFRLSGLERNRLSQRGMGAVMPRAANDSLEG 273
Query: 143 YAKNRRAIV 151
A NRR +
Sbjct: 274 RALNRRVEI 282
>gi|228469693|ref|ZP_04054661.1| immunogenic 75 kDa protein PG4 [Porphyromonas uenonis 60-3]
gi|228308712|gb|EEK17438.1| immunogenic 75 kDa protein PG4 [Porphyromonas uenonis 60-3]
Length = 559
Score = 57.1 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 50/132 (37%), Gaps = 28/132 (21%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
+++D S+R + L L + + D + + D GS+ + L RRA +
Sbjct: 426 HDIYYDFDRASLRLEGKKSLDYLVTLLEQNPDVRLELSSNTDRKGSQRYNKRLSQRRAQS 485
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGH-----------------------DED---- 141
V NY +A+GI+A R++ YGKE P V E+
Sbjct: 486 VVNYLIAKGIAADRLEARGYGKERPYVVTKGMATRFDWLPEGQELTAEWVGALTEEQQVV 545
Query: 142 AYAKNRRAIVFL 153
NRR +
Sbjct: 546 CDQLNRRTEFTV 557
>gi|28871259|ref|NP_793878.1| ompA family protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|28854509|gb|AAO57573.1| ompA family protein [Pseudomonas syringae pv. tomato str. DC3000]
Length = 381
Score = 57.1 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 28/69 (40%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
LI GHAD G + + RA +V F G+ +R+ G MP +
Sbjct: 214 VLILGHADTSGPTEGNQKISQERAQSVAAIFRLSGLERNRLSQRGMGAVMPRAANDSLEG 273
Query: 143 YAKNRRAIV 151
A NRR +
Sbjct: 274 RALNRRVEI 282
>gi|327405866|ref|YP_004346704.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
16823]
gi|327321374|gb|AEA45866.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
Length = 687
Score = 57.1 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 32/114 (28%), Positives = 48/114 (42%), Gaps = 11/114 (9%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAV 109
+VFFD +RP L+ L L+ + I GH D G ++ L RA +V
Sbjct: 572 NVFFDLDKAILRPESFLELNKLRDLLKANPTMKIEIGGHTDTRGDAAKNMQLSDARAKSV 631
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGH----------DEDAYAKNRRAIVFL 153
Y +A+GI ASR+ +G P + E A+ +NRR +
Sbjct: 632 KEYLIAQGIEASRLSSKGFGATKPIITDDVINKMATEKEKEKAHQENRRTEYKI 685
>gi|225552270|ref|ZP_03773210.1| flagellar motor apparatus [Borrelia sp. SV1]
gi|225371268|gb|EEH00698.1| flagellar motor apparatus [Borrelia sp. SV1]
Length = 260
Score = 57.1 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 50/138 (36%), Gaps = 15/138 (10%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSY----SIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ + S+ FFD++S IQ +++ +L +F IE
Sbjct: 109 QSKNIVVRQEERGIVISLAADAFFDSASADVKLEENRDSIQKIASFIGFLSPRGYNFKIE 168
Query: 87 GHADELGS-----RNSSIALGLRRAYAVFNYFVARGISA------SRMKVTSYGKEMPSV 135
GH D + + S+ L + R+ + + + + + +V+ +G P
Sbjct: 169 GHTDNIDTDINGPWKSNWELSVARSVNMLEHILNYLDQSDVKRIENSFEVSGFGGSRPIA 228
Query: 136 YGHDEDAYAKNRRAIVFL 153
+ A NRR + +
Sbjct: 229 TDDTPEGRAYNRRIDILI 246
>gi|240137207|ref|YP_002961676.1| Chemotaxis protein MotB [Methylobacterium extorquens AM1]
gi|240007173|gb|ACS38399.1| Chemotaxis protein MotB [Methylobacterium extorquens AM1]
Length = 468
Score = 57.1 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 48/133 (36%), Gaps = 9/133 (6%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+P + E S+ D + F S P ++ L + L ++
Sbjct: 335 APAPQVEVRRTGEGVLISITDEINYSMFGIGSAEPTPKVVKALERIAKILNSRPGRVVVR 394
Query: 87 GHADELGSR---NSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDA 142
GH D R + L RA V G+ +R+ ++ Y P + + +
Sbjct: 395 GHTDGRPFRSETYDNWRLSSARAQMASYMLVRGGLDEARIDRIEGYADRQPRIANNPKA- 453
Query: 143 YAKNRRAIVFLKG 155
A+NRR + L+G
Sbjct: 454 -AENRRIEILLRG 465
>gi|117925243|ref|YP_865860.1| OmpA/MotB domain-containing protein [Magnetococcus sp. MC-1]
gi|117608999|gb|ABK44454.1| OmpA/MotB domain protein [Magnetococcus sp. MC-1]
Length = 257
Score = 57.1 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 37/102 (36%), Gaps = 5/102 (4%)
Query: 58 SYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYA----VFNYF 113
S + + ++ + L + + + I H D + + A V Y
Sbjct: 130 SDTFQAKLTEICNILTTHPDTKNNKIRIIAHTDTTPPPGGMLPTNWALSAAQAAAVVGYM 189
Query: 114 VARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+G + R++V + G+ P D +KNRR + +
Sbjct: 190 STQGGVDPVRLEVRAKGEFAPKESNDTADGRSKNRRIEILIS 231
>gi|269122521|ref|YP_003310698.1| OmpA/MotB domain protein [Sebaldella termitidis ATCC 33386]
gi|268616399|gb|ACZ10767.1| OmpA/MotB domain protein [Sebaldella termitidis ATCC 33386]
Length = 358
Score = 57.1 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 31/83 (37%), Gaps = 5/83 (6%)
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM--KVTSYGKEMPSVYGHD 139
+ GH D GS + L + RA V G+ + +T G P +
Sbjct: 271 TINVVGHTDSTGSAAYNQKLSVERAQNVARLLREYGLKNTVKFGTITGKGLTQPMATNNT 330
Query: 140 EDAYAKNRRAIVF---LKGCRAN 159
+ +NRR +F + +AN
Sbjct: 331 VEGRYQNRRVELFFDRVDFSKAN 353
>gi|88802743|ref|ZP_01118270.1| putative flagellar motor protein MotB [Polaribacter irgensii 23-P]
gi|88781601|gb|EAR12779.1| putative flagellar motor protein MotB [Polaribacter irgensii 23-P]
Length = 289
Score = 57.1 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 6/116 (5%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGS----RNSS 98
SV D + F+T+SY ++ ++++ L + ++ +IEGH D +
Sbjct: 155 VMISVSDKLLFNTASYRVKKGAYKLIAKLAAVIKSEPSMDVMIEGHTDSRTISNAVVQDN 214
Query: 99 IALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L ++RA ++ ++ SR+ + G MP V + KNRR + +
Sbjct: 215 WDLSVKRATSIVRLLESKYKVEGSRLIASGRGSTMPLVDNSSSENRRKNRRTKIVI 270
>gi|254559218|ref|YP_003066313.1| chemotaxis protein MotB [Methylobacterium extorquens DM4]
gi|254266496|emb|CAX22260.1| Chemotaxis protein MotB [Methylobacterium extorquens DM4]
Length = 474
Score = 57.1 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 48/133 (36%), Gaps = 9/133 (6%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+P + E S+ D + F S P ++ L + L ++
Sbjct: 341 APAPQVEVRRTGEGVLISITDEINYSMFGIGSAEPTPKVVKALERIAKILNSRPGRVVVR 400
Query: 87 GHADELGSR---NSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDA 142
GH D R + L RA V G+ +R+ ++ Y P + + +
Sbjct: 401 GHTDGRPFRSETYDNWRLSSARAQMASYMLVRGGLDEARIDRIEGYADRQPRIANNPKA- 459
Query: 143 YAKNRRAIVFLKG 155
A+NRR + L+G
Sbjct: 460 -AENRRIEILLRG 471
>gi|62999040|gb|AAY25026.1| major outer membrane protein [Aeromonas hydrophila]
Length = 344
Score = 57.1 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 58/146 (39%), Gaps = 16/146 (10%)
Query: 28 ISSPDTVLNESSLQEQFSS----SVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHD 80
+P V+ E+ ++ V F S++P + L+ L + D
Sbjct: 195 APAPAPVVEEAPAPAPQVVEKNFALNSDVLFAFGKDSLKPEGVAALNGLYQQIVEFQPKD 254
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS------ 134
+ ++ G+ D +GS + L RA V N+ V++G++AS++ V G+ P
Sbjct: 255 GNAVVVGYTDRIGSDAYNQKLSEARARTVANFLVSKGMAASKVAVEGRGEANPVTGTKCN 314
Query: 135 ---VYGHDEDAYAKNRRAIVFLKGCR 157
A +RR V + G +
Sbjct: 315 GVKAKAQLISCLAPDRRIEVRVSGVQ 340
>gi|163866750|gb|ABY47335.1| putative outer membrane protein [Aeromonas hydrophila]
Length = 339
Score = 57.1 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 58/147 (39%), Gaps = 12/147 (8%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKH 79
+ + + + ++ V F +++P + L+ L +
Sbjct: 189 VAPVAAPVVEEAPAPAPQVVEKNFALNSDVLFAFGKDTLKPEGVAALNGLYQQIVEFQPK 248
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS----V 135
D + ++ G+ D +GS + L RA V N+ V++G++AS++ + G+ P
Sbjct: 249 DGNAVVVGYTDRIGSDAYNQKLSEARARTVANFLVSKGMAASKVAIEGRGEANPVTGTKC 308
Query: 136 YGHDEDAY-----AKNRRAIVFLKGCR 157
G A A +RR V + G +
Sbjct: 309 NGVTAKAQLISCLAPDRRVEVRVSGVQ 335
>gi|84500927|ref|ZP_00999162.1| peptidoglycan-associated protein [Oceanicola batsensis HTCC2597]
gi|84390994|gb|EAQ03412.1| peptidoglycan-associated protein [Oceanicola batsensis HTCC2597]
Length = 153
Score = 57.1 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 59/153 (38%), Gaps = 3/153 (1%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M + +L+ + + + D I + + + G V+F + S
Sbjct: 1 MTFRYALTLLTVFALPAAAQTS--DPVIVKETAPATSARTGPEAAQDEGLQVYFPSGVSS 58
Query: 61 IRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
+ L + +I G+AD +GS +++ L LRRA V + V+RGI
Sbjct: 59 LSQQAAAKLDRAARLYRDGNPIVMIVSGNADTVGSAAANLDLSLRRARTVASGLVSRGIP 118
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
R++V G V + A ++NR +
Sbjct: 119 IDRLQVVGRGNSELPVPTENGVANSENRSVSIT 151
>gi|254208912|ref|ZP_04915260.1| OmpA family protein [Burkholderia mallei JHU]
gi|147750788|gb|EDK57857.1| OmpA family protein [Burkholderia mallei JHU]
Length = 193
Score = 57.1 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 9/121 (7%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FD ++PA Q L L + ++ + + ++ G+ D +GS + L LR
Sbjct: 63 ITYQADTLFDFDKAVLKPAGKQKLDELAAKIQGMNVEVVVATGYTDRIGSDKYNDRLSLR 122
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE--------DAYAKNRRAIVFLKGC 156
RA AV +Y V++G+ A+++ GK P + A +RR V + G
Sbjct: 123 RAQAVKSYLVSKGVPANKVYTEGKGKRNPVTGNTCKQKNRKQLIACLAPDRRVEVEVVGT 182
Query: 157 R 157
+
Sbjct: 183 Q 183
>gi|209519335|ref|ZP_03268134.1| OmpA/MotB domain protein [Burkholderia sp. H160]
gi|209500219|gb|EEA00276.1| OmpA/MotB domain protein [Burkholderia sp. H160]
Length = 215
Score = 57.1 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 8/119 (6%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FD ++PA LS L S ++ + + ++ GH D +GS + L LR
Sbjct: 94 ITYQADALFDFDKAILKPAGKDRLSELASKIQGINLEVVVATGHTDRIGSDAYNDRLSLR 153
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY-------AKNRRAIVFLKGC 156
RA AV + V++G+ A+R+ G+ P G ++ A +RR V + G
Sbjct: 154 RAQAVKAFLVSKGVEANRIYTEGKGRRNPVTTGCNQKNRKQLIACLAPDRRVEVEVVGT 212
>gi|153836901|ref|ZP_01989568.1| outer membrane protein [Vibrio parahaemolyticus AQ3810]
gi|260362576|ref|ZP_05775496.1| outer membrane protein [Vibrio parahaemolyticus K5030]
gi|260878366|ref|ZP_05890721.1| outer membrane protein [Vibrio parahaemolyticus AN-5034]
gi|260896123|ref|ZP_05904619.1| outer membrane protein [Vibrio parahaemolyticus Peru-466]
gi|260901510|ref|ZP_05909905.1| outer membrane protein [Vibrio parahaemolyticus AQ4037]
gi|149749859|gb|EDM60604.1| outer membrane protein [Vibrio parahaemolyticus AQ3810]
gi|308088130|gb|EFO37825.1| outer membrane protein [Vibrio parahaemolyticus Peru-466]
gi|308090275|gb|EFO39970.1| outer membrane protein [Vibrio parahaemolyticus AN-5034]
gi|308107674|gb|EFO45214.1| outer membrane protein [Vibrio parahaemolyticus AQ4037]
gi|308115286|gb|EFO52826.1| outer membrane protein [Vibrio parahaemolyticus K5030]
Length = 205
Score = 57.1 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 52/133 (39%), Gaps = 1/133 (0%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLI 85
+ + + FD S I + L ++L+K+ I
Sbjct: 57 TPIGAEVDNDGCETYLHKEEQYQLKILFDNDSALINQMFKNKIDELAAFLKKYPTTSIEI 116
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+G+A ++G ++ L RA V N + +GI R+ + ++G + G D ++A
Sbjct: 117 QGYASKVGRAEYNLNLSRHRAENVRNLLIEKGIPGDRLAIIAFGDTQLAEPGMDRVSHAL 176
Query: 146 NRRAIVFLKGCRA 158
NRR + G +
Sbjct: 177 NRRVTATVVGQQG 189
>gi|220913721|ref|YP_002489030.1| OmpA/MotB domain protein [Arthrobacter chlorophenolicus A6]
gi|219860599|gb|ACL40941.1| OmpA/MotB domain protein [Arthrobacter chlorophenolicus A6]
Length = 266
Score = 57.1 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 50/147 (34%), Gaps = 3/147 (2%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQF-SSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+ ++ K D+ + + VG FF + QVL +
Sbjct: 101 LTALQQQMETALKAQQLDSNVEFQISERGLTVKLVGSQAFFLPDRPELTRRASQVLDTIS 160
Query: 74 SWLEKHDCDFLIEGHADELGS-RNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKE 131
L + ++EGHA + S+ L R+ V Y V RG R+ ++G
Sbjct: 161 PTLAPAGLEIMVEGHAANGITAFPSTWELSSARSVNVLRYLVDRGGVAPGRIGAVAFGSA 220
Query: 132 MPSVYGHDEDAYAKNRRAIVFLKGCRA 158
E+ NRR V + +A
Sbjct: 221 RQVNDDSTEELMELNRRVDVVVLSDKA 247
>gi|111115105|ref|YP_709723.1| flagellar motor protein MotB [Borrelia afzelii PKo]
gi|216263787|ref|ZP_03435781.1| flagellar motor apparatus [Borrelia afzelii ACA-1]
gi|110890379|gb|ABH01547.1| flagellar motor rotation protein B [Borrelia afzelii PKo]
gi|215979831|gb|EEC20653.1| flagellar motor apparatus [Borrelia afzelii ACA-1]
Length = 260
Score = 57.1 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 50/138 (36%), Gaps = 15/138 (10%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSY----SIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ + S+ FFD++S IQ +++ L +F IE
Sbjct: 109 QSKNIIVRQEERGIVISLAADAFFDSASADVKLEDNRDSIQKIASFIGVLSSRGYNFKIE 168
Query: 87 GHADELGS-----RNSSIALGLRRAYAVFNYFVARGISAS------RMKVTSYGKEMPSV 135
GH D + + ++ L + R+ + + + ++ + +V+ +G P
Sbjct: 169 GHTDNIDTDVNGPWKNNWELSVARSVNMLEHILNYLDQSNVKSIENKFEVSGFGGSRPIA 228
Query: 136 YGHDEDAYAKNRRAIVFL 153
+ A NRR + +
Sbjct: 229 TDDTPEGRAYNRRIDILI 246
>gi|301384367|ref|ZP_07232785.1| ompA family protein [Pseudomonas syringae pv. tomato Max13]
gi|302133682|ref|ZP_07259672.1| ompA family protein [Pseudomonas syringae pv. tomato NCPPB 1108]
Length = 320
Score = 57.1 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 28/69 (40%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
LI GHAD G + + RA +V F G+ +R+ G MP +
Sbjct: 154 VLILGHADTSGPTEGNQKISQERAQSVAAIFRLSGLERNRLSQRGMGAVMPRAANDSLEG 213
Query: 143 YAKNRRAIV 151
A NRR +
Sbjct: 214 RALNRRVEI 222
>gi|163850073|ref|YP_001638116.1| OmpA/MotB domain-containing protein [Methylobacterium extorquens
PA1]
gi|163661678|gb|ABY29045.1| OmpA/MotB domain protein [Methylobacterium extorquens PA1]
Length = 468
Score = 57.1 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 48/133 (36%), Gaps = 9/133 (6%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+P + E S+ D + F S P ++ L + L ++
Sbjct: 335 APAPQVEVRRTGEGVLISITDEINYSMFGIGSAEPTPKVVKALERIAKILNSRPGRVVVR 394
Query: 87 GHADELGSR---NSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDA 142
GH D R + L RA V G+ +R+ ++ Y P + + +
Sbjct: 395 GHTDGRPFRSETYDNWRLSSARAQMASYMLVRGGLDEARIDRIEGYADRQPRIANNPKA- 453
Query: 143 YAKNRRAIVFLKG 155
A+NRR + L+G
Sbjct: 454 -AENRRIEILLRG 465
>gi|124006521|ref|ZP_01691354.1| fibronectin-binding protein, putative [Microscilla marina ATCC
23134]
gi|123987934|gb|EAY27614.1| fibronectin-binding protein, putative [Microscilla marina ATCC
23134]
Length = 130
Score = 57.1 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 20/114 (17%), Positives = 43/114 (37%), Gaps = 1/114 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK-HDCDFLIEGHADELGSRNSSIA 100
Q ++ S++F SY I + + + ++ I H D +G + +
Sbjct: 13 AQKHKAIRVSIYFGGGSYYIDAKQKRNIVKVIKQIKDLSKYQISITSHTDNIGGKEYNEW 72
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L R+ AV + I ++ + +G++ P + +NRR +
Sbjct: 73 LSKMRSNAVLKQLIEHQIKKGKVLIKDFGQDNPMYTNDSHNGRIRNRRVDLLFS 126
>gi|53720132|ref|YP_109118.1| outer membrane protein a precursor [Burkholderia pseudomallei
K96243]
gi|53724795|ref|YP_102249.1| OmpA family protein [Burkholderia mallei ATCC 23344]
gi|76811968|ref|YP_334381.1| outer membrane protein a [Burkholderia pseudomallei 1710b]
gi|126442031|ref|YP_001059910.1| ompA family protein [Burkholderia pseudomallei 668]
gi|126452054|ref|YP_001067198.1| ompA family protein [Burkholderia pseudomallei 1106a]
gi|167825270|ref|ZP_02456741.1| ompA family protein [Burkholderia pseudomallei 9]
gi|167919986|ref|ZP_02507077.1| ompA family protein [Burkholderia pseudomallei BCC215]
gi|226197831|ref|ZP_03793405.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9]
gi|237813303|ref|YP_002897754.1| OmpA family protein [Burkholderia pseudomallei MSHR346]
gi|238561689|ref|ZP_00441673.2| OmpA family protein [Burkholderia mallei GB8 horse 4]
gi|242317986|ref|ZP_04817002.1| OmpA family protein [Burkholderia pseudomallei 1106b]
gi|251766980|ref|ZP_02265557.2| OmpA family protein [Burkholderia mallei PRL-20]
gi|254177032|ref|ZP_04883689.1| OmpA family protein [Burkholderia mallei ATCC 10399]
gi|254258959|ref|ZP_04950013.1| ompA family protein [Burkholderia pseudomallei 1710a]
gi|254360032|ref|ZP_04976302.1| OmpA family protein [Burkholderia mallei 2002721280]
gi|262193316|ref|YP_001079767.2| OmpA family protein [Burkholderia mallei NCTC 10247]
gi|52210546|emb|CAH36529.1| outer membrane protein a precursor [Burkholderia pseudomallei
K96243]
gi|52428218|gb|AAU48811.1| OmpA family protein [Burkholderia mallei ATCC 23344]
gi|76581421|gb|ABA50896.1| outer membrane protein a precursor [Burkholderia pseudomallei
1710b]
gi|126221524|gb|ABN85030.1| outer membrane protein A [Burkholderia pseudomallei 668]
gi|126225696|gb|ABN89236.1| OmpA family protein [Burkholderia pseudomallei 1106a]
gi|148029272|gb|EDK87177.1| OmpA family protein [Burkholderia mallei 2002721280]
gi|160698073|gb|EDP88043.1| OmpA family protein [Burkholderia mallei ATCC 10399]
gi|224812455|gb|ACN64870.1| OmpA family protein [Burkholderia pseudomallei]
gi|225930019|gb|EEH26032.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9]
gi|237505834|gb|ACQ98152.1| OmpA family protein [Burkholderia pseudomallei MSHR346]
gi|238524141|gb|EEP87576.1| OmpA family protein [Burkholderia mallei GB8 horse 4]
gi|242141225|gb|EES27627.1| OmpA family protein [Burkholderia pseudomallei 1106b]
gi|243064216|gb|EES46402.1| OmpA family protein [Burkholderia mallei PRL-20]
gi|254217648|gb|EET07032.1| ompA family protein [Burkholderia pseudomallei 1710a]
gi|261826008|gb|ABN03326.2| OmpA family protein [Burkholderia mallei NCTC 10229]
gi|261835034|gb|ABO04145.2| OmpA family protein [Burkholderia mallei NCTC 10247]
Length = 224
Score = 57.1 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 9/121 (7%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FD ++PA Q L L + ++ + + ++ G+ D +GS + L LR
Sbjct: 94 ITYQADTLFDFDKAVLKPAGKQKLDELAAKIQGMNVEVVVATGYTDRIGSDKYNDRLSLR 153
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE--------DAYAKNRRAIVFLKGC 156
RA AV +Y V++G+ A+++ GK P + A +RR V + G
Sbjct: 154 RAQAVKSYLVSKGVPANKVYTEGKGKRNPVTGNTCKQKNRKQLIACLAPDRRVEVEVVGT 213
Query: 157 R 157
+
Sbjct: 214 Q 214
>gi|126463896|ref|YP_001045009.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
17029]
gi|126105707|gb|ABN78237.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17029]
Length = 254
Score = 57.1 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 47/136 (34%), Gaps = 5/136 (3%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
++ D L + + + L + + V + F S + +L+ L + ++
Sbjct: 118 LAAADPLPERRETAEVSPESFGLLDP-ALQVNVRIHFSFDSAVLAADQTPLLAQLCTVMK 176
Query: 78 KHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSV 135
D I GH D GS + L L RA V Y R++ G+
Sbjct: 177 ASDIRLFQIVGHTDAAGSEAYNQQLSLLRAEEVRRYLTGPCGIAPERLRAVGMGE-RFLA 235
Query: 136 YGHDEDAYAKNRRAIV 151
D + +NRR
Sbjct: 236 DKKDPRS-GENRRVEF 250
>gi|221196013|ref|ZP_03569060.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M]
gi|221202687|ref|ZP_03575706.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2]
gi|221176621|gb|EEE09049.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2]
gi|221182567|gb|EEE14967.1| OmpA/MotB domain protein [Burkholderia multivorans CGD2M]
Length = 405
Score = 57.1 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
Query: 83 FLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ G+AD + + S+ A+ RA V VA G+ A ++V G
Sbjct: 329 VRVVGYADSAPAGSARQISNQAISEARAEDVARILVAAGVPAHGLRVEGRGDADALADNG 388
Query: 139 DEDAYAKNRRAIVFL 153
E A+NRR V +
Sbjct: 389 TESGRARNRRVEVIV 403
>gi|134277521|ref|ZP_01764236.1| OmpA family protein [Burkholderia pseudomallei 305]
gi|134251171|gb|EBA51250.1| OmpA family protein [Burkholderia pseudomallei 305]
Length = 224
Score = 57.1 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 9/121 (7%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FD ++PA Q L L + ++ + + ++ G+ D +GS + L LR
Sbjct: 94 ITYQADTLFDFDKAVLKPAGKQKLDELAAKIQGMNVEVVVATGYTDRIGSDKYNDRLSLR 153
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE--------DAYAKNRRAIVFLKGC 156
RA AV +Y V++G+ A+++ GK P + A +RR V + G
Sbjct: 154 RAQAVKSYLVSKGVPANKVYTEGKGKRNPVTGNTCKQKNRKQLIACLAPDRRVEVEVVGT 213
Query: 157 R 157
+
Sbjct: 214 Q 214
>gi|331015715|gb|EGH95771.1| ompA family protein [Pseudomonas syringae pv. lachrymans str.
M302278PT]
Length = 320
Score = 57.1 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 28/69 (40%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
LI GHAD G + + RA +V F G+ +R+ G MP +
Sbjct: 154 VLILGHADTSGPTEGNQKISQERAQSVAAIFRLSGLERNRLSQRGMGAVMPRAANDSLEG 213
Query: 143 YAKNRRAIV 151
A NRR +
Sbjct: 214 RALNRRVEI 222
>gi|159045480|ref|YP_001534274.1| hypothetical protein Dshi_2940 [Dinoroseobacter shibae DFL 12]
gi|157913240|gb|ABV94673.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12]
Length = 648
Score = 57.1 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 42/119 (35%), Gaps = 14/119 (11%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIEGHADELG-----S 94
SV FDT ++ P ++ + L ++GH D +
Sbjct: 526 FSSSVLFDTGEVALSPQGQAEVAKVAGILRSVADRIPEGIDWVLRVDGHTDNVPVTGGGK 585
Query: 95 RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ L RA +V + + +GI R+ T +G+ P + A NRR +
Sbjct: 586 YADNWELSQGRALSVARFLIEDQGIPPDRLAPTGFGEYQPVSLEDTPEGRALNRRIELK 644
>gi|330966520|gb|EGH66780.1| ompA family protein [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 320
Score = 57.1 bits (136), Expect = 9e-07, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 28/69 (40%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
LI GHAD G + + RA +V F G+ +R+ G MP +
Sbjct: 154 VLILGHADTSGPTEGNQKISQERAQSVAAIFRLSGLERNRLSQRGMGAVMPRAANDSLEG 213
Query: 143 YAKNRRAIV 151
A NRR +
Sbjct: 214 RALNRRVEI 222
>gi|114047773|ref|YP_738323.1| OmpA/MotB domain-containing protein [Shewanella sp. MR-7]
gi|113889215|gb|ABI43266.1| OmpA/MotB domain protein [Shewanella sp. MR-7]
Length = 264
Score = 57.1 bits (136), Expect = 9e-07, Method: Composition-based stats.
Identities = 28/152 (18%), Positives = 67/152 (44%), Gaps = 3/152 (1%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQF--SSSVGDSVFFDTSSYSIRPADIQ 67
L++++ + S+ + + Q+Q ++G +V F T S + +
Sbjct: 105 LASLSSKQQASEQRAAEYASTQKQLDELLAEQQQLLSELALGMNVQFRTGSSELESHFLP 164
Query: 68 VLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT 126
L N+ +++ + + ++G+AD G + AL +R V Y + +G++ R+
Sbjct: 165 QLDNVVKVMKRSSESNLELKGYADRRGDLAYNQALSEQRLLEVRGYLIKQGVAPERITTQ 224
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
++G MP D ++ +RR + ++ +
Sbjct: 225 AFGARMPLNDQQDSESDVFDRRVTLTMQPNQG 256
>gi|186472558|ref|YP_001859900.1| OmpA/MotB domain-containing protein [Burkholderia phymatum STM815]
gi|184194890|gb|ACC72854.1| OmpA/MotB domain protein [Burkholderia phymatum STM815]
Length = 207
Score = 57.1 bits (136), Expect = 9e-07, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 53/147 (36%), Gaps = 4/147 (2%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLN--ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVL 69
A ++ ++ + +P V + L Q ++ F S + V
Sbjct: 61 AYATAEVAKSGKIEQAVGTPANVETRYGTLLAAQPPRPTTFTINFLFDSATELAPQSAVT 120
Query: 70 SNLGSWLEKHDC--DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
+ + GH D GS L ++RA V + + GI A +++ +
Sbjct: 121 VQQMKAVLATWPAPHLTVVGHTDLAGSPEYDDRLSMQRAQTVAKFLIKAGIPARQIETAA 180
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFLK 154
GK P V+ D NRR ++ ++
Sbjct: 181 RGKREPLVHTADGVPNQMNRRVVITIQ 207
>gi|85708815|ref|ZP_01039881.1| peptidoglycan-associated protein [Erythrobacter sp. NAP1]
gi|85690349|gb|EAQ30352.1| peptidoglycan-associated protein [Erythrobacter sp. NAP1]
Length = 378
Score = 57.1 bits (136), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
VFFD +I +L N + ++ ++ GH D +GS++ ++ L RR
Sbjct: 267 PYIVFFDFDESAITSEAATILDNAVTAYSNCGSARVMLAGHTDTVGSQSYNLDLAARRNA 326
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+V Y RG++ S + ++G+ V D +NRR +
Sbjct: 327 SVQQYLTGRGVARSMIASEAFGESDLRVPTADGVRELQNRRVEIT 371
>gi|301598138|ref|ZP_07243146.1| Inner membrane lipoprotein yiaD precursor [Acinetobacter baumannii
AB059]
Length = 45
Score = 56.7 bits (135), Expect = 9e-07, Method: Composition-based stats.
Identities = 10/44 (22%), Positives = 16/44 (36%)
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
NY +++ I A + G P + KNRR +
Sbjct: 1 KNYLISKNIPADHLSTEGLGSSKPVADNTSAEGRKKNRRIEFTV 44
>gi|262173884|ref|ZP_06041561.1| outer membrane protein [Vibrio mimicus MB-451]
gi|261891242|gb|EEY37229.1| outer membrane protein [Vibrio mimicus MB-451]
Length = 189
Score = 56.7 bits (135), Expect = 9e-07, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
+ + + Y + +VL S ++ ++EGHAD+ G+ + AL RRA AV
Sbjct: 86 LHYPFNKYQLSGPHQEVLQTYVSMVDSQY-KIVVEGHADQTGNPKYNQALSERRAGAVTR 144
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
Y +R+ +G+ P + NRR ++ ++
Sbjct: 145 YLRDTLKLGNRIVEKGFGESAPVCTVQENAQTGCNRRVVLTIQ 187
>gi|332561144|ref|ZP_08415462.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides WS8N]
gi|332274942|gb|EGJ20258.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides WS8N]
Length = 453
Score = 56.7 bits (135), Expect = 9e-07, Method: Composition-based stats.
Identities = 14/113 (12%), Positives = 37/113 (32%), Gaps = 8/113 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGS---WLEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
D F ++ + P +++++ + + + GH D + + S+ +
Sbjct: 338 DPELFRSARAEVNPDYAPLVASVAAVLAENRELVGAVRVIGHTDNVPVQRSNPFASNQGL 397
Query: 107 YAVFNYFVARGI-----SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+A + A + + P A+NRR + ++
Sbjct: 398 SEARAATLAALLVEGGVPAGIVTAEGHADTEPVADNATRAGRAQNRRVEIRIE 450
>gi|240949813|ref|ZP_04754142.1| major outer membrane protein [Actinobacillus minor NM305]
gi|240295730|gb|EER46425.1| major outer membrane protein [Actinobacillus minor NM305]
Length = 372
Score = 56.7 bits (135), Expect = 9e-07, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 52/126 (41%), Gaps = 12/126 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
S V F S++PA Q L + + + G+AD +G + +++ L
Sbjct: 246 SFSSDVLFAFGKSSLKPAAAQALDAANNEINALGLANPAIQVNGYADRIGKQAANLKLSQ 305
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE---------DAYAKNRRAIVFLK 154
RRA V NY V++G +A+ + YG P + A +RR V ++
Sbjct: 306 RRAETVANYLVSKGQNAANVTAVGYGSANPVTGNTCDAVKGRKALIACLAPDRRVEVQVQ 365
Query: 155 GCRANT 160
G + T
Sbjct: 366 GSKEVT 371
>gi|126463889|ref|YP_001045002.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
17029]
gi|126105700|gb|ABN78230.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17029]
Length = 453
Score = 56.7 bits (135), Expect = 9e-07, Method: Composition-based stats.
Identities = 14/113 (12%), Positives = 37/113 (32%), Gaps = 8/113 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGS---WLEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
D F ++ + P +++++ + + + GH D + + S+ +
Sbjct: 338 DPELFRSARAEVNPDYAPLVASVAAVLAENRELVGAVRVIGHTDNVPVQRSNPFASNQGL 397
Query: 107 YAVFNYFVARGI-----SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+A + A + + P A+NRR + ++
Sbjct: 398 SEARAATLAALLVEGGVPAGIVTAEGHADTEPVADNATRAGRAQNRRVEIRIE 450
>gi|284042425|ref|YP_003392765.1| OmpA/MotB domain protein [Conexibacter woesei DSM 14684]
gi|283946646|gb|ADB49390.1| OmpA/MotB domain protein [Conexibacter woesei DSM 14684]
Length = 716
Score = 56.7 bits (135), Expect = 9e-07, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 28/73 (38%), Gaps = 1/73 (1%)
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
GH D G ++ ALGL RA AV G+ A ++ S G+ P
Sbjct: 643 RVTCTGHTDSDGGVVANRALGLARAKAVCAELRRLGVKAP-LRTRSAGESRPRATNDTAQ 701
Query: 142 AYAKNRRAIVFLK 154
NRR + L
Sbjct: 702 GRRLNRRVELTLS 714
>gi|126736197|ref|ZP_01751940.1| OmpA domain protein [Roseobacter sp. CCS2]
gi|126714363|gb|EBA11231.1| OmpA domain protein [Roseobacter sp. CCS2]
Length = 564
Score = 56.7 bits (135), Expect = 9e-07, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 48/129 (37%), Gaps = 7/129 (5%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHA 89
V N+ + + ++ + + F T + + + L L ++ E + + + G A
Sbjct: 436 AVQNQIATELPGANRLSLTFRFPTDVFVLDSKGQRDLDRLVEFMSRPENANRELIFVGFA 495
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGI----SASRMKVTSYGKEMPSVYGHDEDAYAK 145
D +G + L RA V ++RM + P D ++
Sbjct: 496 DSVGQYVYNTQLSRDRAQQVLQQVRNHPNAGPLRSTRMSTVGLSEAAPVSCNDDAYGRSR 555
Query: 146 NRRAIVFLK 154
NRR V+++
Sbjct: 556 NRRVEVWVR 564
>gi|152978942|ref|YP_001344571.1| SmpA/OmlA domain-containing protein [Actinobacillus succinogenes
130Z]
gi|150840665|gb|ABR74636.1| SmpA/OmlA domain protein [Actinobacillus succinogenes 130Z]
Length = 282
Score = 56.7 bits (135), Expect = 9e-07, Method: Composition-based stats.
Identities = 31/121 (25%), Positives = 49/121 (40%), Gaps = 8/121 (6%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIAL 101
S + FD ++ +V+ N+ S L+ + + G+ D LGS ++ L
Sbjct: 140 YSSFHLSGDFLFDFDKDTLTTEGKKVVDNVASQLKSSEAKEVSVAGYTDRLGSDAYNLDL 199
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK------NRRAIVFLKG 155
RRA V N + +G+SA ++ T YGK E A NRR + G
Sbjct: 200 SQRRADRVKNRLIEQGVSA-QITATGYGKANQVKACEGERGQALINCLHPNRRVEIKSSG 258
Query: 156 C 156
Sbjct: 259 T 259
Score = 35.6 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 17/130 (13%), Positives = 38/130 (29%), Gaps = 2/130 (1%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ S + + +A +++ G + T+ P E ++ + D+ F S
Sbjct: 1 MKLSRLLLSTTAAVVLAACGNLSDITEDGLPAGDTPEQAMANLVWPKIDDARFNHDGSQF 60
Query: 61 IRPADIQVLSNLGSWLEKHDCDFLIEG-HADELGSRNSSIALGLRRAYA-VFNYFVARGI 118
+ + + + K L+ H E V + +
Sbjct: 61 GSWPNWDNVRMVERGMNKDQIANLLGRPHFSEGLYGVREWDYAFNYRENGVHKICQYKVL 120
Query: 119 SASRMKVTSY 128
M S+
Sbjct: 121 FDKNMNAQSF 130
>gi|304393260|ref|ZP_07375188.1| OmpA/MotB domain protein [Ahrensia sp. R2A130]
gi|303294267|gb|EFL88639.1| OmpA/MotB domain protein [Ahrensia sp. R2A130]
Length = 343
Score = 56.7 bits (135), Expect = 9e-07, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 47/119 (39%), Gaps = 13/119 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGS--------WLEKHDCDFLIEGHADELG-----S 94
V F + ++ A + ++ L + ++ D ++GH D +
Sbjct: 222 FQSEVLFPSGGATLNEAGLGEMAKLANALIELGEEIPDEIDWVLRVDGHTDNIPLSGSGR 281
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA +V Y + +G+ A R+ +G+ P ++A +NRR + L
Sbjct: 282 YADNWELSSGRATSVVKYLITQGVPAERLVAAGFGEFQPLEDVDTQEARDRNRRIELKL 340
>gi|221369488|ref|YP_002520584.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides KD131]
gi|221162540|gb|ACM03511.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides KD131]
Length = 453
Score = 56.7 bits (135), Expect = 9e-07, Method: Composition-based stats.
Identities = 14/113 (12%), Positives = 37/113 (32%), Gaps = 8/113 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGS---WLEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
D F ++ + P +++++ + + + GH D + + S+ +
Sbjct: 338 DPELFRSARAEVNPDYAPLVASVAAVLAENRELVGAVRVIGHTDNVPVQRSNPFASNQGL 397
Query: 107 YAVFNYFVARGI-----SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+A + A + + P A+NRR + ++
Sbjct: 398 SEARAATLAALLVEGGVPAGIVTAEGHADTEPVADNATRAGRAQNRRVEIRIE 450
>gi|157959916|ref|YP_001499950.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC
700345]
gi|157844916|gb|ABV85415.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345]
Length = 303
Score = 56.7 bits (135), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 2/110 (1%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHD--CDFLIEGHADELGSRNSSIALGLRRAYAVF 110
F SS + A Q L + +L+ + L++GHAD G +++ L RA V
Sbjct: 182 LFAPSSSLLNAAHEQDLYAVYRYLQADPSIVEVLVDGHADASGDHLANLVLSKERADEVV 241
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
+ + G+S ++ +G P + NRR + L AN+
Sbjct: 242 SRLIELGVSPKMIQTRHHGTRTPVASNNSTQGRELNRRVTLRLVKSAANS 291
>gi|319778081|ref|YP_004134511.1| ompa/motb domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317171800|gb|ADV15337.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 176
Score = 56.7 bits (135), Expect = 9e-07, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 49/136 (36%), Gaps = 6/136 (4%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS---WLEK 78
+ + S + ++S+ + + + F S + L
Sbjct: 42 KSRGICVGSAEECKSKSNDASAVKTGLDMLINFGLDSAELDATARAELDEFAKALKDNRL 101
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
F++EG+ D G+ + + L RRA +V + A GI R+ G++ P
Sbjct: 102 STFSFVVEGYTDATGTVHHNEGLSQRRAKSVAAFLTASGIEPDRINAVGMGEKNPRSSNP 161
Query: 139 DEDAYAKNRRAIVFLK 154
+ NRR + +K
Sbjct: 162 YD---PLNRRVEMRIK 174
>gi|282879247|ref|ZP_06287997.1| OmpA family protein [Prevotella buccalis ATCC 35310]
gi|281298640|gb|EFA91059.1| OmpA family protein [Prevotella buccalis ATCC 35310]
Length = 703
Score = 56.7 bits (135), Expect = 9e-07, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 46/132 (34%), Gaps = 28/132 (21%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
D++F+D ++RP Q L L E + + H D GS+ + L RRA +
Sbjct: 534 DNIFYDFDKATLRPESKQALDELVKLLNENGNVTIELSAHCDYKGSKEYNKQLAQRRAES 593
Query: 109 VFNYFVARGISASRMKVTSYGKEMP---------------------------SVYGHDED 141
V Y +A GI+ R+ YGKE P E
Sbjct: 594 VVQYLIAGGIAKDRLSPVGYGKEKPKVVRKKLTERYPWLKEDDVLTEAFIKKLDPEKQEI 653
Query: 142 AYAKNRRAIVFL 153
NRR +
Sbjct: 654 CNQLNRRTEFKV 665
>gi|213971390|ref|ZP_03399504.1| OmpA family protein [Pseudomonas syringae pv. tomato T1]
gi|213923833|gb|EEB57414.1| OmpA family protein [Pseudomonas syringae pv. tomato T1]
Length = 417
Score = 56.7 bits (135), Expect = 9e-07, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 28/69 (40%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
LI GHAD G + + RA +V F G+ +R+ G MP +
Sbjct: 251 VLILGHADTSGPTEGNQKISQERAQSVAAIFRLSGLERNRLSQRGMGAVMPRAANDSLEG 310
Query: 143 YAKNRRAIV 151
A NRR +
Sbjct: 311 RALNRRVEI 319
>gi|145297230|ref|YP_001140071.1| outer membrane protein A [Aeromonas salmonicida subsp. salmonicida
A449]
gi|142850002|gb|ABO88323.1| outer membrane protein A [Aeromonas salmonicida subsp. salmonicida
A449]
Length = 368
Score = 56.7 bits (135), Expect = 9e-07, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 11/120 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADI---QVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGL 103
S+ V F+ + +++PA L + D + GH D +GS + AL
Sbjct: 243 SLSSDVLFEFNKATLKPAASHALDTLFSQIVAANPKDGAATVVGHTDRIGSDAYNQALSE 302
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD--------EDAYAKNRRAIVFLKG 155
+RA V +Y +A+G+ A +++V GK P + A +RR + L+G
Sbjct: 303 QRARTVADYLIAKGLFADKVRVEGRGKSSPVTGNNCTTGSRPALIACLAPDRRVEIHLEG 362
>gi|117920854|ref|YP_870046.1| OmpA/MotB domain-containing protein [Shewanella sp. ANA-3]
gi|117613186|gb|ABK48640.1| OmpA/MotB domain protein [Shewanella sp. ANA-3]
Length = 264
Score = 56.7 bits (135), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 67/152 (44%), Gaps = 3/152 (1%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQF--SSSVGDSVFFDTSSYSIRPADIQ 67
L++I+ + S+ + + Q+Q ++G +V F T S + +
Sbjct: 105 LASISAKQQASEQRAAEYASTQKQLDELLAEQQQLLSELALGMNVQFRTGSSELESHFLP 164
Query: 68 VLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT 126
L N+ +++ + + ++G+AD G + AL +R V Y + +G++ R+
Sbjct: 165 QLDNVAKVMKRSSESNLELKGYADRRGDLAYNQALSEQRLLEVRGYLIKQGVAPERITTQ 224
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
++G MP D ++ +RR + ++ +
Sbjct: 225 AFGARMPLNDQQDSESDVFDRRVTLTMQPNQG 256
>gi|163786625|ref|ZP_02181073.1| putative flagellar motor protein MotB [Flavobacteriales bacterium
ALC-1]
gi|159878485|gb|EDP72541.1| putative flagellar motor protein MotB [Flavobacteriales bacterium
ALC-1]
Length = 283
Score = 56.7 bits (135), Expect = 9e-07, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 51/140 (36%), Gaps = 6/140 (4%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
++T+ + D + S+ D + F+T+SY + ++L L +
Sbjct: 131 SKAMNTEDLNEDEDIVVDINDTVVMISIADDMLFNTASYRVSNKADKILKKLADVINSEP 190
Query: 81 -CDFLIEGHADELGSRN----SSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPS 134
D ++EGH D + L + RA +V + ++ + P
Sbjct: 191 SLDVMVEGHTDSRSINTAKVSDNWELSVLRATSVVKKLQKQFKVAPEQLIASGRSSYQPL 250
Query: 135 VYGHDEDAYAKNRRAIVFLK 154
V D AKNRR + L
Sbjct: 251 VENDSRDNRAKNRRTRIILM 270
>gi|37704626|gb|AAR01585.1| OprF [Pseudomonas sp. MFY71]
Length = 321
Score = 56.7 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 48/119 (40%), Gaps = 4/119 (3%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD ++P + NL ++++
Sbjct: 203 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYADIKNLADFMKQ 262
Query: 79 HDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSV 135
+ +EGH D +G + L RRA AV + + R++ YG+ P
Sbjct: 263 YPATHTTVEGHTDSVGPDAYNQKLSERRANAVKQVLTQQYGVETARVQSIGYGESRPVA 321
>gi|28900810|ref|NP_800465.1| putative outer membrane protein [Vibrio parahaemolyticus RIMD
2210633]
gi|28809256|dbj|BAC62298.1| putative outer membrane protein [Vibrio parahaemolyticus RIMD
2210633]
Length = 215
Score = 56.7 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 52/133 (39%), Gaps = 1/133 (0%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLI 85
+ + + FD S I + L ++L+K+ I
Sbjct: 67 TPIGAEVDNDGCETYLHKEEQYQLKILFDNDSALINQMFKNKIDELAAFLKKYPTTSIEI 126
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+G+A ++G ++ L RA V N + +GI R+ + ++G + G D ++A
Sbjct: 127 QGYASKVGRAEYNLNLSRHRAENVRNLLIEKGIPGDRLAIIAFGDTQLAEPGMDRVSHAL 186
Query: 146 NRRAIVFLKGCRA 158
NRR + G +
Sbjct: 187 NRRVTATVVGQQG 199
>gi|315185632|gb|EFU19400.1| OmpA/MotB domain protein [Spirochaeta thermophila DSM 6578]
Length = 1337
Score = 56.7 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 40/113 (35%), Gaps = 3/113 (2%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL---IEGHADELGSRNSSIA 100
F + D + ++ A I+ L + + ++ + E R +
Sbjct: 1222 FPPNKADLILDESEEGRKNRAIIERLVQIFTKYRRYKIRIEGHAVNLSGTEREEREELVP 1281
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L L RA AV VA G+ R+ G P V DE KNRR L
Sbjct: 1282 LSLARAEAVKQALVAMGLDPGRITTAGMGGRFPIVPHTDEKNRWKNRRVEFIL 1334
>gi|307718765|ref|YP_003874297.1| OmpA family protein [Spirochaeta thermophila DSM 6192]
gi|306532490|gb|ADN02024.1| OmpA family protein [Spirochaeta thermophila DSM 6192]
Length = 1337
Score = 56.7 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 40/113 (35%), Gaps = 3/113 (2%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL---IEGHADELGSRNSSIA 100
F + D + ++ A I+ L + + ++ + E R +
Sbjct: 1222 FPPNKADLILDESEEGRKNRAIIERLVQIFTKYRRYKIRIEGHAVNLSGTEREEREELVP 1281
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L L RA AV VA G+ R+ G P V DE KNRR L
Sbjct: 1282 LSLARAEAVKQALVAMGLDPGRITTAGMGGRFPIVPHTDEKNRWKNRRVEFIL 1334
>gi|310816653|ref|YP_003964617.1| flagellar motor protein [Ketogulonicigenium vulgare Y25]
gi|308755388|gb|ADO43317.1| flagellar motor protein [Ketogulonicigenium vulgare Y25]
Length = 510
Score = 56.7 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 48/136 (35%), Gaps = 25/136 (18%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLG--------SWLEKHDCDFLIEGHADELG-----S 94
V F+ S ++ A ++N+ + D ++GH D
Sbjct: 373 FSSEVLFEAGSATLSAAGDAEIANVAALLRRIASEIPSQIDWVIRVDGHTDNTPLSGTGE 432
Query: 95 RNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI--- 150
++ L RA +V Y + I +R+ +G+ P + +A A+NRR
Sbjct: 433 FANNWELSQARALSVVLYMIQNEGIPPNRLAANGFGEYQPLNPANTPEARAQNRRIDQTP 492
Query: 151 --------VFLKGCRA 158
++G RA
Sbjct: 493 PHRAETDRTIIEGRRA 508
>gi|258620793|ref|ZP_05715828.1| outer membrane protein [Vibrio mimicus VM573]
gi|258586991|gb|EEW11705.1| outer membrane protein [Vibrio mimicus VM573]
Length = 173
Score = 56.7 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
+ + + Y + ++L S ++ ++EGHAD+ G+ + AL RRA AV
Sbjct: 70 LHYPFNKYQLSGPHQEILQTYVSMVDSQY-KIVVEGHADQTGNPKYNQALSERRAGAVTR 128
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
Y +R+ +G+ P + NRR ++ ++
Sbjct: 129 YLRDTLKLGNRIVEKGFGESAPVCTVQENAQTGCNRRVVLTIQ 171
>gi|332561151|ref|ZP_08415469.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides WS8N]
gi|332274949|gb|EGJ20265.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides WS8N]
Length = 254
Score = 56.7 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 44/139 (31%), Gaps = 9/139 (6%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQF-----SSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
G D L P+ E F + V + F S + +L+ L +
Sbjct: 114 GADRLAAADPPPEGRETAEVSPESFGLLDPALQVNVRIHFAFDSAVLAADQTPLLAQLCT 173
Query: 75 WLEKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEM 132
++ D I GH D GS + L L RA V Y R++ G+
Sbjct: 174 VMKASDIRLFQIVGHTDAAGSEAYNQQLSLLRAEEVRRYLTGPCGIAPERLRAVGMGERF 233
Query: 133 PSVYGHDEDAYAKNRRAIV 151
+ +NRR
Sbjct: 234 L--TNQSDPRSGENRRVEF 250
>gi|330878862|gb|EGH13011.1| ompA family protein [Pseudomonas syringae pv. morsprunorum str.
M302280PT]
Length = 320
Score = 56.7 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 28/69 (40%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
LI GHAD G + + RA +V F G+ +R+ G MP +
Sbjct: 154 VLILGHADTSGPTEGNQKISQERAQSVAAIFRLSGLERNRLSQRGMGAVMPRAANDSLEG 213
Query: 143 YAKNRRAIV 151
A NRR +
Sbjct: 214 RALNRRVEI 222
>gi|218515615|ref|ZP_03512455.1| hypothetical conserved membrane protein [Rhizobium etli 8C-3]
Length = 246
Score = 56.7 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 40/108 (37%), Gaps = 4/108 (3%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLR 104
V V F S +I P +L L S +++ D I GH D G + L +
Sbjct: 137 DQVNYRVQFAFDSSAIAPKQKPMLQKLCSVVKEMDIKLIRIVGHTDASGGARYNQNLSML 196
Query: 105 RAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA V +F R++ G++ P + +NRR
Sbjct: 197 RAREVARFFTEDCHIPPERLEAVGVGEQFPLDPQKPKAD--ENRRVEF 242
>gi|167911995|ref|ZP_02499086.1| OmpA family protein [Burkholderia pseudomallei 112]
gi|254203932|ref|ZP_04910292.1| OmpA family protein [Burkholderia mallei FMH]
gi|254295613|ref|ZP_04963071.1| ompA family protein [Burkholderia pseudomallei 406e]
gi|147745444|gb|EDK52524.1| OmpA family protein [Burkholderia mallei FMH]
gi|157805511|gb|EDO82681.1| ompA family protein [Burkholderia pseudomallei 406e]
Length = 200
Score = 56.7 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 9/121 (7%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FD ++PA Q L L + ++ + + ++ G+ D +GS + L LR
Sbjct: 70 ITYQADTLFDFDKAVLKPAGKQKLDELAAKIQGMNVEVVVATGYTDRIGSDKYNDRLSLR 129
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE--------DAYAKNRRAIVFLKGC 156
RA AV +Y V++G+ A+++ GK P + A +RR V + G
Sbjct: 130 RAQAVKSYLVSKGVPANKVYTEGKGKRNPVTGNTCKQKNRKQLIACLAPDRRVEVEVVGT 189
Query: 157 R 157
+
Sbjct: 190 Q 190
>gi|13472828|ref|NP_104395.1| hypothetical protein mll3244 [Mesorhizobium loti MAFF303099]
gi|14023575|dbj|BAB50181.1| mll3244 [Mesorhizobium loti MAFF303099]
Length = 967
Score = 56.7 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 57/148 (38%), Gaps = 17/148 (11%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGD--------SVFFDTSSYSIRPADIQVLSNLGS 74
++S+ VL+ S LQE + + D +FF + P VL L
Sbjct: 817 AAAEQLSADGVVLDVSQLQELNLAELNDLREAIQATDIFFYSGKVVPGPEQTPVLDRLAD 876
Query: 75 WLEKH---------DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
+++ F++ GH+D G ++ ++ RA V RG++ + V
Sbjct: 877 QIKEFAENARKSGVTARFMLTGHSDATGRETANASISAARAETVRALLNKRGVAPELLLV 936
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G P V + + + NRR + +
Sbjct: 937 RGAGTFEPLVPENSQTGSSTNRRVSITV 964
>gi|86143203|ref|ZP_01061605.1| putative flagellar motor protein MotB [Leeuwenhoekiella blandensis
MED217]
gi|85830108|gb|EAQ48568.1| putative flagellar motor protein MotB [Leeuwenhoekiella blandensis
MED217]
Length = 279
Score = 56.7 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 47/132 (35%), Gaps = 7/132 (5%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEG 87
D + + +V D + F++ SY + +L L + ++EG
Sbjct: 133 VGEDEDIQVDIDETVVMINVSDKLLFNSGSYRVSNKADGLLKRLADVINSEPAIKVMVEG 192
Query: 88 HADELG-----SRNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDED 141
H D+ + L + R+ A+ + +++ +P V ++
Sbjct: 193 HTDDQTVKPGAYIKDNWELSVERSTAIIRELQDKYNVDPAKLIAAGRSSYLPLVDNATKE 252
Query: 142 AYAKNRRAIVFL 153
AKNRR + +
Sbjct: 253 DRAKNRRTRIVI 264
>gi|110637108|ref|YP_677315.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
gi|110279789|gb|ABG57975.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
Length = 841
Score = 56.7 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 38/103 (36%), Gaps = 2/103 (1%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
VFFD+ + + Q L +L E D + GH D G + L RA AV+
Sbjct: 23 VFFDSGKSILSEREKQRLDSLIYTFETELIYDIRLVGHTDSTGYPEKNKQLSKARAIAVY 82
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
Y R +T G P + A NRR + +
Sbjct: 83 TYLSKRKNIHFS-SITGKGSLSPVQANTTDAGRAHNRRCDISI 124
>gi|332300756|ref|YP_004442677.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707]
gi|332177819|gb|AEE13509.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707]
Length = 147
Score = 56.7 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/154 (20%), Positives = 55/154 (35%), Gaps = 10/154 (6%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M I + + + GI + ++ E+ + D V F
Sbjct: 1 MSKKKIITYIVLVLI----GIGFIGDCVNRRQRNKLYRERVEELEQNFND-VKFAKGKAD 55
Query: 61 IRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
+ VL +L ++E H +EGH E G + L RA A ++ +++G+S
Sbjct: 56 LTREAQLVLCDLAKFMESHSGLKLKLEGHTSEEGDETFNQRLSEARAQAAVDFLISQGVS 115
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
A R++ G P E NRR +
Sbjct: 116 AERLEAEGKGSTDPIDPDSLEV----NRRTEFVV 145
>gi|330993347|ref|ZP_08317282.1| Outer membrane protein [Gluconacetobacter sp. SXCC-1]
gi|329759377|gb|EGG75886.1| Outer membrane protein [Gluconacetobacter sp. SXCC-1]
Length = 407
Score = 56.7 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 43/109 (39%), Gaps = 7/109 (6%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADE------LGSRNSSIALGLR 104
VFFD ++ ++++ + G+ D + ++ L LR
Sbjct: 298 VFFDWDGAALTGRAREIVAEAAQASTHVQTTRIEVNGYTDNSAAQPGPRGQQYNLGLSLR 357
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA +V + G+ AS + V YG+ P V + +NRR + L
Sbjct: 358 RADSVKAELIRDGVPASAIGVQGYGEARPLVPTGPDTREPQNRRVEIIL 406
>gi|330830630|ref|YP_004393582.1| major outer membrane protein OmpAI [Aeromonas veronii B565]
gi|328805766|gb|AEB50965.1| Major outer membrane protein OmpAI [Aeromonas veronii B565]
Length = 339
Score = 56.7 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 58/147 (39%), Gaps = 12/147 (8%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKH 79
+ + + + ++ V F +++P + L+ L +
Sbjct: 189 VAPVAAPVVEEAPAPAPQVVEKNFALNSDVLFAFGKDTLKPEGVAALNGLYQQIVEFQPK 248
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS----V 135
D + ++ G+ D +GS + L RA V N+ V++G++AS++ + G+ P
Sbjct: 249 DGNAVVVGYTDRIGSDAYNQKLSEARARTVANFLVSKGMAASKVAIEGRGEANPVTGTKC 308
Query: 136 YGHDEDAY-----AKNRRAIVFLKGCR 157
G A A +RR V + G +
Sbjct: 309 NGVTAKAQLISCLAPDRRVEVRVSGVQ 335
>gi|94497803|ref|ZP_01304369.1| probable outer membrane protein [Sphingomonas sp. SKA58]
gi|94422692|gb|EAT07727.1| probable outer membrane protein [Sphingomonas sp. SKA58]
Length = 215
Score = 56.7 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 56/151 (37%), Gaps = 10/151 (6%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPAD---IQV 68
A+++M+ + + + +E +V ++ D +
Sbjct: 39 AVSVMAGANESANAAEPQRSILRPEVAEPEEPPKIEPAQAVI-GFGETPMKLDDAARQAL 97
Query: 69 LSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
+ + + K + GH+D G+ + +RA V +Y V +G++ R+ + +
Sbjct: 98 DALIATPAMKAGGPITLRGHSDSRGADGDNKVASAKRAELVRDYLVEKGVAKDRITLIAI 157
Query: 129 GKEMPSVYG------HDEDAYAKNRRAIVFL 153
G+ P D + AKNRR V +
Sbjct: 158 GEGRPVAPNVREDGSDDPEGQAKNRRVDVTV 188
>gi|85714945|ref|ZP_01045930.1| OmpA/MotB [Nitrobacter sp. Nb-311A]
gi|85698142|gb|EAQ36014.1| OmpA/MotB [Nitrobacter sp. Nb-311A]
Length = 209
Score = 56.7 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 41/111 (36%), Gaps = 6/111 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGS---WLEKHDCDFLIEGHADELGSRNSSIALG 102
V ++FD S + L+NLG E ++ GH D GS + +L
Sbjct: 91 PGVDLQIYFDFDSAELSAKAEPQLNNLGQALTSPELAGSVIMLGGHTDAKGSDRYNQSLS 150
Query: 103 LRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
RRA + + + R + YG+ + A+NRR +
Sbjct: 151 ERRAETIKRFLIERYKISPENLVAVGYGESRLKNKADPDA--AENRRVEIV 199
>gi|330828258|ref|YP_004391210.1| outer membrane protein A [Aeromonas veronii B565]
gi|328803394|gb|AEB48593.1| Outer membrane protein A [Aeromonas veronii B565]
Length = 345
Score = 56.7 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 11/120 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
++ V FD + +++P Q L +L S +E+ + GH D +GS + L
Sbjct: 220 TLSSDVLFDFNKATLKPEASQALDSLYSQIEEARPKDGVATVIGHTDRIGSDAYNQKLSE 279
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY------AKNRRAIVFLKG 155
+RA V NY V +GI A+++ V GK P + A +RR V ++G
Sbjct: 280 QRAQTVANYLVGKGIPAAKINVEGRGKSSPVTGDSCVSKSKRELIVCLAPDRRVDVKVEG 339
>gi|258622513|ref|ZP_05717535.1| lateral flagellar MotY-like protein [Vibrio mimicus VM573]
gi|258585213|gb|EEW09940.1| lateral flagellar MotY-like protein [Vibrio mimicus VM573]
Length = 358
Score = 56.7 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 44/104 (42%), Gaps = 2/104 (1%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
++F ++ L L ++ + L++G+ D +G +++ + +RA +
Sbjct: 231 IYFAFGQRTLSNEQKMRLRALYRYIVEDSRVNKVLVDGYTDNVGPSVANLTISRQRAELI 290
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G++ +++V ++G P AKNRR + L
Sbjct: 291 AKELNRLGLAEEKVEVRAHGLRYPVASNDTATGQAKNRRVTLRL 334
>gi|171061026|ref|YP_001793375.1| OmpA/MotB domain-containing protein [Leptothrix cholodnii SP-6]
gi|170778471|gb|ACB36610.1| OmpA/MotB domain protein [Leptothrix cholodnii SP-6]
Length = 558
Score = 56.7 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 2/72 (2%)
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
++ G +D LG ++ L +RA AV G+ + V +G P
Sbjct: 466 RVMLLGFSDALGGDCANQRLSQQRATAVATELATYGVRPA--VVHGFGSAAPIASNETGA 523
Query: 142 AYAKNRRAIVFL 153
+NRR V+L
Sbjct: 524 GRERNRRVEVWL 535
>gi|323436227|ref|ZP_01051616.2| OmpA family protein [Dokdonia donghaensis MED134]
gi|321496542|gb|EAQ37623.2| OmpA family protein [Dokdonia donghaensis MED134]
Length = 256
Score = 56.7 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 42/111 (37%), Gaps = 7/111 (6%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
+ ++FD ++IRP L + E + H D +++L RR +
Sbjct: 143 NPIYFDFDKHNIRPDAALELEKVIAVMREYPSLKIDVRSHTDSRAPDAYNMSLSQRRNVS 202
Query: 109 VFNYFVARGISAS-RMKVTSYGKEMPSVYGH-----DEDAYAKNRRAIVFL 153
Y V +G + R+ YG+ + E+ + NRR+ +
Sbjct: 203 TIRYIVDQGGISMSRLTGRGYGETQLTNACGNGIECTEEEHQLNRRSEFII 253
>gi|153871121|ref|ZP_02000371.1| lipoprotein [Beggiatoa sp. PS]
gi|152072413|gb|EDN69629.1| lipoprotein [Beggiatoa sp. PS]
Length = 285
Score = 56.7 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 38/109 (34%), Gaps = 8/109 (7%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEK-----HDCDFLIEGHADELGSRNSSIALGLRRA 106
+ F T S IR + + + + IEGH D G + + L +RA
Sbjct: 173 IQFPTGSSEIRGNAKRQCQEIAQAVRDVFKTDKNSKIRIEGHTDNQGKADYNRGLSAKRA 232
Query: 107 YAVFNYFVARGISA-SRMKVTSYGKEMPSV--YGHDEDAYAKNRRAIVF 152
+ V R +V +G+E P DE NRR +
Sbjct: 233 KKIKEQLVKELNLPAERFEVVGWGEEKPIARCNNGDEHGCFLNRRVTLV 281
>gi|218528676|ref|YP_002419492.1| OmpA/MotB domain protein [Methylobacterium chloromethanicum CM4]
gi|218520979|gb|ACK81564.1| OmpA/MotB domain protein [Methylobacterium chloromethanicum CM4]
Length = 462
Score = 56.7 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 48/133 (36%), Gaps = 9/133 (6%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+P + E S+ D + F S P ++ L + L ++
Sbjct: 329 APAPQVEVRRTGEGVLISITDEINYSMFGIGSAEPTPKVVKALERIAKILNSRPGRVVVR 388
Query: 87 GHADELGSR---NSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDA 142
GH D R + L RA V G+ +R+ ++ Y P + + +
Sbjct: 389 GHTDGRPFRSETYDNWRLSSARAQMASYMLVRGGLDEARIDRIEGYADRQPRIANNPKA- 447
Query: 143 YAKNRRAIVFLKG 155
A+NRR + L+G
Sbjct: 448 -AENRRIEILLRG 459
>gi|86136016|ref|ZP_01054595.1| OmpA family protein [Roseobacter sp. MED193]
gi|85826890|gb|EAQ47086.1| OmpA family protein [Roseobacter sp. MED193]
Length = 188
Score = 56.7 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FF T + I A L + + + F+I GH D S +I L RRA AV
Sbjct: 88 FFATDKHYISAAGKTRLKEFFNSNKGNVRSFVIAGHTDSRASDEYNIRLSQRRANAVAGV 147
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
A+ + A + +YG+ P V A+NRR +
Sbjct: 148 --AKSVGARIADIRAYGERDPRVPNTSASNMAQNRRVEI 184
>gi|330807890|ref|YP_004352352.1| hypothetical protein PSEBR_a1170 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327375998|gb|AEA67348.1| Conserved hypothetical protein; putative outer membrane protein,
putative OmpA family [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 370
Score = 56.7 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
LI GHAD G+ +++ L RA +V F G+ R+ + G P +
Sbjct: 204 VLILGHADTSGAAPANLKLSQERAQSVAAIFRLSGLQRDRLMLRGMGAVAPRAANDSVEG 263
Query: 143 YAKNRRAIVFLKGCRANT 160
A NRR + + ANT
Sbjct: 264 RALNRRVELLV--TPANT 279
>gi|296126061|ref|YP_003633313.1| OmpA/MotB domain protein [Brachyspira murdochii DSM 12563]
gi|296017877|gb|ADG71114.1| OmpA/MotB domain protein [Brachyspira murdochii DSM 12563]
Length = 266
Score = 56.7 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 44/132 (33%), Gaps = 15/132 (11%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADI--QVLSNLGSWLEKHDCDFLIEGHADELGS 94
+ F S+G +F+++S +I + + L S L + IEGH D
Sbjct: 124 VEEDERGFVISLGADQYFESASTNIIDSQNNVETFIKLASLLSGIPNEIRIEGHTDSGSI 183
Query: 95 RN---------SSIALGLRRAYAVFNYFVARGISA----SRMKVTSYGKEMPSVYGHDED 141
++ L RA + +A ++ + Y P D
Sbjct: 184 IPGSITEQKFGNNWGLSSARAMVILEKLFENDQTAKLDRNKYSIAGYADTRPVASNDLPD 243
Query: 142 AYAKNRRAIVFL 153
A NRR + +
Sbjct: 244 GRALNRRVDIVI 255
>gi|189179675|dbj|BAG39456.1| outer membrane protein [Gluconacetobacter intermedius]
Length = 405
Score = 56.7 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 43/109 (39%), Gaps = 7/109 (6%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSR------NSSIALGLR 104
VFFD ++ ++++ + G+ D + ++ L +R
Sbjct: 296 VFFDWDGAALTGRSREIVAQAAQASTHVQTTRIEVNGYTDNSAAHPGPRGEQYNMGLSMR 355
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA +V + G+ AS + + YG+ P V + +NRR + L
Sbjct: 356 RADSVKAELIRDGVPASGIDIHGYGEAHPMVPTGPDTREPQNRRVEIIL 404
>gi|167841641|ref|ZP_02468325.1| ompA family protein [Burkholderia thailandensis MSMB43]
Length = 224
Score = 56.7 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 9/121 (7%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FD ++PA Q L L S ++ + + ++ G+ D +GS + L LR
Sbjct: 94 ITYQADTLFDFDKAILKPAGKQKLDELASKIQGMNVEVVVATGYTDRIGSDKYNDRLSLR 153
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE--------DAYAKNRRAIVFLKGC 156
RA AV +Y V++G+ A+++ GK P + A +RR V + G
Sbjct: 154 RAQAVKSYLVSKGVPANKVYTEGKGKRNPVTGNTCKQKNRKQLIACLAPDRRVEVEVVGT 213
Query: 157 R 157
+
Sbjct: 214 Q 214
>gi|325474507|gb|EGC77694.1| OmpA family protein [Treponema denticola F0402]
Length = 1345
Score = 56.7 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 41/124 (33%), Gaps = 12/124 (9%)
Query: 42 EQFSSSVGDSVFFD-------TSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
++ +V +F + + + + +EGHA+
Sbjct: 1219 DKLKIAVPSIIFRANAADFEGLDKAIVDKNKSILKRIAVILNKFPEYQVQVEGHANTTTG 1278
Query: 95 RNSSI-----ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
L +RA AV + + G+ +SR+ G P +D D + KNRR
Sbjct: 1279 TEKEETTALLPLSKQRAEAVRQFLIKEGVRSSRLSSIGMGSSKPVASLNDRDNWWKNRRV 1338
Query: 150 IVFL 153
L
Sbjct: 1339 EFIL 1342
>gi|109947291|ref|YP_664519.1| flagellar motor protein MotB [Helicobacter acinonychis str. Sheeba]
gi|109714512|emb|CAJ99520.1| flagellar motor rotation protein MotB [Helicobacter acinonychis
str. Sheeba]
Length = 253
Score = 56.7 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/151 (15%), Positives = 48/151 (31%), Gaps = 7/151 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS-SYSIRPADIQVL 69
++ + S I+ + + + ++ F+ + S +I + +
Sbjct: 83 ASESSKPASQNTESKITITRKGEGSVLEQIDQGSILKLPSNLLFENAVSDAINQDMMLYI 142
Query: 70 SNLGSWLEKHDCDFLIE--GHADELG----SRNSSIALGLRRAYAVFNYFVARGISASRM 123
+ ++K I G D S L RAY V + G+ ++
Sbjct: 143 ERIAKIIQKLPKRVHINVRGFTDNTPLIKTRFKSHYELAANRAYRVMKVLMQYGVDPDQL 202
Query: 124 KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+SYG P + KN R +F
Sbjct: 203 SFSSYGSTNPIAPNDSLENRMKNNRVEIFFS 233
>gi|115523189|ref|YP_780100.1| flagellar motor protein MotB [Rhodopseudomonas palustris BisA53]
gi|115517136|gb|ABJ05120.1| OmpA/MotB domain protein [Rhodopseudomonas palustris BisA53]
Length = 423
Score = 56.7 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 49/148 (33%), Gaps = 9/148 (6%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLS 70
+ I+ + + E ++ D F S P ++ L
Sbjct: 274 ASKLQAAINAALASLGAAHPATEVRETSEGLLINLTDDANYGMFANGSAEPTPGLVRTLD 333
Query: 71 NLGSWLEKHDCDFLIEGHADELGSR---NSSIALGLRRAYAVFNYFVARGISASRMK-VT 126
+ + + ++ GH D+ R + L RA+ F+ + G+ A R++ +
Sbjct: 334 KITPLISQQRGLVIVRGHTDDRPYRSADYDNWRLSTARAHMAFHMLIRGGLDAKRIERIE 393
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
Y P +NRR + ++
Sbjct: 394 GYADRRPKTPNDPSA--PQNRRIEILIR 419
>gi|313674920|ref|YP_004052916.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
gi|312941618|gb|ADR20808.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
Length = 639
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 41/105 (39%), Gaps = 3/105 (2%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+ F+ +S +RP L + +L + + I GH D G + +L RA A+
Sbjct: 529 IEFEENSAKLRPDMYSDLDKVVDFLLDYPEFKLKISGHTDSSGDELRNKSLSQERADAIR 588
Query: 111 NYFVARGISAS-RMKVTSYGKEMPSVYGH-DEDAYAKNRRAIVFL 153
+Y + R+ YG P V +D NRR +
Sbjct: 589 DYIIILHPIEEERVVAEGYGNSQPVVEEEITDDDRRLNRRVEFEI 633
>gi|162448918|ref|YP_001611285.1| ompA-family exported protein [Sorangium cellulosum 'So ce 56']
gi|161159500|emb|CAN90805.1| ompA-family exported protein [Sorangium cellulosum 'So ce 56']
Length = 195
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/180 (18%), Positives = 63/180 (35%), Gaps = 30/180 (16%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDT---------------KISSPDTVLNESSLQEQFSS 46
+ + +++SA +G + K ++P ++ S
Sbjct: 16 KLPALILVVSAPLAAFAAGCGSDPQPPANVASDVAPPPVAKTAAPPAPKQDTEKPTSGSI 75
Query: 47 SVGDSVF----------FDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELG 93
+ D + F S SI L L + GHAD G
Sbjct: 76 RIDDKILKACGDLPTARFAFDSTSIEGEAAGALDALARCFVSGPLKGKGMKLIGHADPRG 135
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ LG +RA +V Y +G+ R+ +S G+ G DE+ +A++R+ + L
Sbjct: 136 ETEYNLGLGQKRAGSVAEYLGKKGLDQGRIATSSKGEFE--ATGTDEEGWARDRKVDILL 193
>gi|88858031|ref|ZP_01132673.1| Outer membrane protein and related peptidoglycan-associated lipo
protein [Pseudoalteromonas tunicata D2]
gi|88819648|gb|EAR29461.1| Outer membrane protein and related peptidoglycan-associated lipo
protein [Pseudoalteromonas tunicata D2]
Length = 299
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/152 (15%), Positives = 54/152 (35%), Gaps = 7/152 (4%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD------SVFFDTSSYSIR 62
A+ +++ + + + + V+F+ +
Sbjct: 146 FFKALALIAPQPTTKAEPETRVAKVEPCACDEKPAKKEPAKNKQPPEFIVYFEFDKDHLT 205
Query: 63 PADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS 121
I ++ + + + ++ GH D G + L RR V N + G+ +
Sbjct: 206 KTAIATINEVKQAVNEWKPKTVVLSGHTDLAGQNIYNEGLSTRRVTNVLNGLILAGVPEN 265
Query: 122 RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ +++ G+ P+V D A+NRR + L
Sbjct: 266 KIDISALGERHPAVRTPDGTKKAENRRVEIHL 297
>gi|325103778|ref|YP_004273432.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
gi|324972626|gb|ADY51610.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
Length = 706
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 6/108 (5%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYA 108
D++++D IRP L + + H + H D S + + L +RR +
Sbjct: 581 DNIYYDLDRAEIRPDARPALDKIALIMLTHPEVSIITSSHCDSRASNDYNKLLSIRRGNS 640
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHD-----EDAYAKNRRAIV 151
Y VA+G++A+R+KV YGK + +D E+ NRR
Sbjct: 641 AKAYLVAKGVAANRIKVEYYGKTRLTNRCYDGVPCSEEEQQMNRRTEF 688
>gi|154252545|ref|YP_001413369.1| OmpA/MotB domain-containing protein [Parvibaculum lavamentivorans
DS-1]
gi|154156495|gb|ABS63712.1| OmpA/MotB domain protein [Parvibaculum lavamentivorans DS-1]
Length = 338
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 14/120 (11%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIEGHADELGS---- 94
++ +FF++ S I P+ + L + + + + + ++GH D
Sbjct: 217 AMQSEIFFESGSADINPSGKEQLDKIATAVREIAAEIPDDIPWVLRVDGHTDANPIATAQ 276
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG-HDEDAYAKNRRAIVFL 153
S+ L RA AV NY V RG+ +R+ +G+ P G + +NRR L
Sbjct: 277 FPSNWYLSSARAIAVVNYLVERGVPQNRLVAAGFGQYHPLADGRGTAENR-RNRRIEFKL 335
>gi|190895263|ref|YP_001985556.1| hypothetical protein RHECIAT_PC0000936 [Rhizobium etli CIAT 652]
gi|190700924|gb|ACE95006.1| hypothetical conserved membrane protein [Rhizobium etli CIAT 652]
Length = 246
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 40/108 (37%), Gaps = 4/108 (3%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLR 104
V V F S +I P +L L S +++ D I GH D G + L +
Sbjct: 137 DQVNYRVQFAFDSSAIAPKQKPMLQKLCSVVKEMDIKLIRIVGHTDASGGARYNQNLSML 196
Query: 105 RAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA V +F R++ G++ P + +NRR
Sbjct: 197 RAREVARFFTEDCHIPPERLEAVGVGEQFPLDPQKPKAD--ENRRVEF 242
>gi|83720431|ref|YP_442168.1| OmpA family protein [Burkholderia thailandensis E264]
gi|83654256|gb|ABC38319.1| OmpA family protein [Burkholderia thailandensis E264]
Length = 224
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 9/121 (7%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FD ++PA Q L L + ++ + + ++ G+ D +GS + L LR
Sbjct: 94 ITYQADTLFDFDKAILKPAGKQKLDELAAKIQGMNVEVVVATGYTDRIGSDKYNDRLSLR 153
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE--------DAYAKNRRAIVFLKGC 156
RA AV +Y V++G+ A+++ GK P + A +RR V + G
Sbjct: 154 RAQAVKSYLVSKGVPANKVYTEGKGKRNPITGNTCKQKNRKQLIACLAPDRRVEVEVVGT 213
Query: 157 R 157
+
Sbjct: 214 Q 214
>gi|294673972|ref|YP_003574588.1| OmpA family protein [Prevotella ruminicola 23]
gi|294472547|gb|ADE81936.1| OmpA family protein [Prevotella ruminicola 23]
Length = 679
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 51/137 (37%), Gaps = 28/137 (20%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGL 103
+ + +++F+D + ++RP L + + + + H D GS + L
Sbjct: 517 APVLIENIFYDFNKATLRPESKTALDQLVVLLNQNPNVTIELSAHTDCRGSEAYNQRLSQ 576
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMP-------------SVYGH--DED------- 141
+RA +V Y +A GI+A R+ YG+ MP G E+
Sbjct: 577 QRAESVVAYLIAHGIAADRLTPKGYGESMPKRIKARVAEKYQFLKEGDVLTEEMINALPE 636
Query: 142 -----AYAKNRRAIVFL 153
+ NRR +
Sbjct: 637 ELHEQCHQMNRRTEFKV 653
>gi|153833067|ref|ZP_01985734.1| outer membrane protein [Vibrio harveyi HY01]
gi|148870635|gb|EDL69542.1| outer membrane protein [Vibrio harveyi HY01]
Length = 204
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 59/138 (42%), Gaps = 1/138 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
D ++ + + + S + V F S I P + + L +L+++
Sbjct: 52 DLCPGTPATSEIDNDGCGEYIKSSEKMEVRVLFANDSDEIDPVFRRQIRELSEFLKEYPS 111
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++G+A ++G ++ L RRA V + GI + R+++ +G + G DE
Sbjct: 112 TSIELQGYASKVGGSEHNLDLSKRRANNVRAALLGYGIESDRVRIVGFGDTHLAEQGTDE 171
Query: 141 DAYAKNRRAIVFLKGCRA 158
++A NRR + G +
Sbjct: 172 VSHALNRRVTASVIGYKG 189
>gi|167950585|ref|ZP_02537659.1| OmpA/MotB [Endoriftia persephone 'Hot96_1+Hot96_2']
Length = 83
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 29/64 (45%)
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ + L RRA V + +G+ A+R++V G+ P E NRR +++
Sbjct: 7 TAEYNQHLSERRAENVAYFLEDQGVPAARIRVEGRGRSEPRASHETEGDRQLNRRVEIYV 66
Query: 154 KGCR 157
+ +
Sbjct: 67 RPIK 70
>gi|37704658|gb|AAR01601.1| OprF [Pseudomonas sp. MFY152]
gi|37704674|gb|AAR01609.1| OprF [Pseudomonas sp. MFY314]
Length = 316
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 50/119 (42%), Gaps = 4/119 (3%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD ++P + NL ++++
Sbjct: 198 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQ 257
Query: 79 HDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSV 135
+ +EGH D +G + L RRA AV + + +SR++ YG+ P
Sbjct: 258 YPSTTTTVEGHTDSVGPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSVGYGESRPVA 316
>gi|268315730|ref|YP_003289449.1| OmpA/MotB domain-containing protein [Rhodothermus marinus DSM 4252]
gi|262333264|gb|ACY47061.1| OmpA/MotB domain protein [Rhodothermus marinus DSM 4252]
Length = 211
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 13/32 (40%)
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
R +V SYG P + NRR ++
Sbjct: 170 PERFEVVSYGPTRPIGPNDTPEGRRLNRRVVI 201
>gi|167570798|ref|ZP_02363672.1| ompA family protein [Burkholderia oklahomensis C6786]
Length = 224
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 9/121 (7%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FD ++PA Q L L + ++ + + ++ G+ D +GS + L LR
Sbjct: 94 ITYQADTLFDFDKAILKPAGKQKLDELAAKIQGMNVEVVVATGYTDRIGSDKYNDRLSLR 153
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE--------DAYAKNRRAIVFLKGC 156
RA AV +Y V++G+ A+++ GK P + A +RR V + G
Sbjct: 154 RAQAVKSYLVSKGVPANKVYTEGKGKRNPVTGNTCKQKNRKQLIACLAPDRRVEVEVVGT 213
Query: 157 R 157
+
Sbjct: 214 Q 214
>gi|167644831|ref|YP_001682494.1| OmpA/MotB domain-containing protein [Caulobacter sp. K31]
gi|167347261|gb|ABZ69996.1| OmpA/MotB domain protein [Caulobacter sp. K31]
Length = 409
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEK-HDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
V+F Y + P V+S + + + ++ GH D GS + L RRA AV
Sbjct: 305 VYFPFDQYVLTPEAQAVVSQAADYAKGGNATKIVVVGHTDTSGSPKYNAKLSERRAKAVA 364
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ V G++A+ + V G+ P+V D NRR+ + +
Sbjct: 365 DGLVGAGVAATTLAVDWKGESEPAVATGDGVKEPLNRRSTISI 407
>gi|114775594|ref|ZP_01451162.1| hypothetical protein SPV1_04678 [Mariprofundus ferrooxydans PV-1]
gi|114553705|gb|EAU56086.1| hypothetical protein SPV1_04678 [Mariprofundus ferrooxydans PV-1]
Length = 198
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 60/148 (40%), Gaps = 6/148 (4%)
Query: 7 FIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADI 66
F+ A ++ + ++ P +++ +Q+ + + FD +S +I+P +
Sbjct: 52 FVWCGACPSLTPKTAETGESPHKEPTPPRKANAVVKQWKPAA--IIHFDFNSATIKPNEK 109
Query: 67 QVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT 126
L+ L + + ++ G+ D G + L RRA AV + ++
Sbjct: 110 TKLAGLFKDI-GRNTTIILRGYTDAAGGMAYNQHLAWRRAQAVRRWLSEHLERQPGYEIR 168
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
++GK Y +NRR ++++
Sbjct: 169 AFGKC---CYARQPGLRPENRRVEIYIR 193
>gi|254229410|ref|ZP_04922826.1| OmpA family protein [Vibrio sp. Ex25]
gi|262396871|ref|YP_003288724.1| outer membrane protein [Vibrio sp. Ex25]
gi|151938101|gb|EDN56943.1| OmpA family protein [Vibrio sp. Ex25]
gi|262340465|gb|ACY54259.1| outer membrane protein [Vibrio sp. Ex25]
Length = 205
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 52/133 (39%), Gaps = 1/133 (0%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLI 85
+ + + FD S I + L ++L+K+ I
Sbjct: 57 TPIGAEVDNDGCETYLHKEEQYQLKILFDNDSALINQIFKNKIDGLAAFLKKYPTTSIEI 116
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+G+A ++G ++ L RA V N + +GI R+ + ++G + G D ++A
Sbjct: 117 QGYASKVGRAEYNLNLSRHRAENVRNLLIEKGIPGDRLAIIAFGDTQLAEPGMDRVSHAL 176
Query: 146 NRRAIVFLKGCRA 158
NRR + G +
Sbjct: 177 NRRVTATVVGQQG 189
>gi|91223761|ref|ZP_01259025.1| hypothetical protein V12G01_18492 [Vibrio alginolyticus 12G01]
gi|91191253|gb|EAS77518.1| hypothetical protein V12G01_18492 [Vibrio alginolyticus 12G01]
Length = 288
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 52/141 (36%), Gaps = 1/141 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
T + + ++ ++ + + F S I P + L+ L H
Sbjct: 134 SQTTCTPPDDIEALRSDLNIVSDIYALLNIDNQFAVDSAEINPKYMGHLAEAAYILRDHP 193
Query: 81 -CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
++ GHAD G+ + + L RA V Y GI++ R+ S G +P G
Sbjct: 194 NLSLVVTGHADATGTPDYNQKLAQARAEQVKRYLTVFGITSERVTTKSVGDNLPLYEGET 253
Query: 140 EDAYAKNRRAIVFLKGCRANT 160
NRR + + +++
Sbjct: 254 SAVRLTNRRVSIEVISPNSDS 274
>gi|37704608|gb|AAR01576.1| OprF [Pseudomonas sp. MFY52]
gi|37704630|gb|AAR01587.1| OprF [Pseudomonas sp. MFY76]
Length = 316
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 4/119 (3%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD ++ + NL ++++
Sbjct: 198 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKTNSYGDIKNLADFMKQ 257
Query: 79 HDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSV 135
+ +EGH D +G + L RRA AV + + +SR++ YG+ P
Sbjct: 258 YPSTTTTVEGHTDSVGPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSVGYGESRPVA 316
>gi|149371350|ref|ZP_01890836.1| OmpA/MotB [unidentified eubacterium SCB49]
gi|149355488|gb|EDM44047.1| OmpA/MotB [unidentified eubacterium SCB49]
Length = 247
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 52/128 (40%), Gaps = 7/128 (5%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTS--SYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
SS + + + L + ++ F + + + Q+ + I
Sbjct: 120 SSGNKPIQKEHLPKPKIHIKNHTIEFKYNAPQITDDHSFKQLDKIVSYLKNDPQITVKIT 179
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
GH D +GS N + +L L+RA AV YF+++ I R+ + G++ P +N
Sbjct: 180 GHTDSIGSDNFNKSLSLKRANAVKRYFLSKKIDTRRIIINGMGEKSPKSKLAS-----QN 234
Query: 147 RRAIVFLK 154
RR + L
Sbjct: 235 RRVEIELS 242
>gi|149191257|ref|ZP_01869513.1| outer membrane protein [Vibrio shilonii AK1]
gi|148834927|gb|EDL51908.1| outer membrane protein [Vibrio shilonii AK1]
Length = 275
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 44/105 (41%), Gaps = 1/105 (0%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F +S + P + L+ + L++H + GHAD G + + RA V Y
Sbjct: 162 FAYNSVEVNPKYMGHLAEAANILKQHPTIRLSVTGHADATGGTEYNEKIAKGRAQQVKRY 221
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
G++ R++ S G+E+P G NRR + + +
Sbjct: 222 LTIFGLAPGRIETHSLGEELPLYEGDSPGVRLTNRRVSIEVIADK 266
>gi|37704666|gb|AAR01605.1| OprF [Pseudomonas sp. MFY220]
gi|37704668|gb|AAR01606.1| OprF [Pseudomonas sp. MFY222]
Length = 315
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 50/119 (42%), Gaps = 4/119 (3%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD ++P + NL ++++
Sbjct: 197 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQ 256
Query: 79 HDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSV 135
+ +EGH D +G + L RRA AV + + +SR++ YG+ P
Sbjct: 257 YPSTSTTVEGHTDSVGPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSVGYGESRPVA 315
>gi|37704636|gb|AAR01590.1| OprF [Pseudomonas sp. MFY80]
gi|37704642|gb|AAR01593.1| OprF [Pseudomonas sp. MFY106]
gi|37704646|gb|AAR01595.1| OprF [Pseudomonas sp. MFY116]
gi|37704648|gb|AAR01596.1| OprF [Pseudomonas sp. MFY122]
Length = 316
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 50/119 (42%), Gaps = 4/119 (3%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD ++P + NL ++++
Sbjct: 198 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQ 257
Query: 79 HDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSV 135
+ +EGH D +G + L RRA AV + + +SR++ YG+ P
Sbjct: 258 YPSTTTTVEGHTDSVGPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSVGYGESRPVA 316
>gi|15616938|ref|NP_240151.1| outer membrane protein A precursor [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|11386970|sp|P57414|OMPA_BUCAI RecName: Full=OmpA-like protein; Flags: Precursor
gi|10039003|dbj|BAB13037.1| outer membrane protein A precursor [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
Length = 349
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 63/145 (43%), Gaps = 19/145 (13%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD- 82
+ IS + + L EQ+S + +++ F +S ++P+ L+ L ++
Sbjct: 204 GKSDISDMFSSDDSEPLNEQYSV-LNENINFPFNSTELKPSSYDKLNKLDDDIKDMQLKN 262
Query: 83 --FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++ GHAD++GS + L RAY++ NY +RG S ++ V GK P ++
Sbjct: 263 VSIVLLGHADKIGSDEYNQKLSEDRAYSIKNYLASRGFSRDKITVKGMGKLYPL---TNQ 319
Query: 141 DAY------------AKNRRAIVFL 153
A +RR + +
Sbjct: 320 VCRDVVNKPLLISCLAPDRRVEIEV 344
>gi|294678953|ref|YP_003579568.1| OmpA/MotB domain-containing protein [Rhodobacter capsulatus SB
1003]
gi|294477773|gb|ADE87161.1| OmpA/MotB domain protein [Rhodobacter capsulatus SB 1003]
Length = 311
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 42/118 (35%), Gaps = 1/118 (0%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRN 96
+L+ ++ D VF +S + + + + + GH D G+
Sbjct: 189 AKALERAGKVALDDLVFASGASQLAEGDFASLSALADYLATRPEARIALVGHTDNSGALA 248
Query: 97 SSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++IAL RA AV + + + ++ G P + KNRR L
Sbjct: 249 ANIALSRDRAAAVRKRLIEKLGVPAGQLSAEGAGWLSPRSSNLTPEGRDKNRRVEAVL 306
>gi|240948744|ref|ZP_04753116.1| lipoprotein Plp4 [Actinobacillus minor NM305]
gi|240296960|gb|EER47538.1| lipoprotein Plp4 [Actinobacillus minor NM305]
Length = 282
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 8/112 (7%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRR 105
++ FD ++ +V+ N+ + L+ + G+ D LGS N ++ L RR
Sbjct: 138 NLSGDFLFDFDKDTLTAKGKEVVDNVAAQLKSSKAQQVKVAGYTDRLGSVNYNLDLSQRR 197
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK------NRRAIV 151
A V V +G++A +++ YGK E A NRR +
Sbjct: 198 ANMVKARLVQQGVTA-QIEAVGYGKANQVKACDGESGQALRDCLRPNRRVEI 248
>gi|78061843|ref|YP_371751.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383]
gi|77969728|gb|ABB11107.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
Length = 404
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 29/78 (37%), Gaps = 4/78 (5%)
Query: 81 CDFLIEGHADELGSRNSSIA----LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ G+AD ++ A L RA V VA G+SA R+ V G
Sbjct: 326 ATLRVAGYADSTPISSTRQASNQVLSDVRARHVAQILVAAGVSAPRISVEGNGDADSLAD 385
Query: 137 GHDEDAYAKNRRAIVFLK 154
A+NRR V +
Sbjct: 386 NGTASGRARNRRVEVTIS 403
>gi|37704624|gb|AAR01584.1| OprF [Pseudomonas sp. MFY70]
gi|37704664|gb|AAR01604.1| OprF [Pseudomonas sp. MFY162]
Length = 298
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 1/93 (1%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALG 102
V V FD ++P + NL ++ + + + GH D +G + L
Sbjct: 206 QVVRVELDVKFDFDKAVVKPNSYGDVKNLADFMAQYPATNVEVAGHTDSVGPDAYNQKLS 265
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
RRA AV V G++ SR+ YG+ P
Sbjct: 266 QRRADAVKQVLVKDGVAPSRVTAVGYGESRPVA 298
>gi|71906867|ref|YP_284454.1| OmpA/MotB [Dechloromonas aromatica RCB]
gi|71846488|gb|AAZ45984.1| OmpA/MotB [Dechloromonas aromatica RCB]
Length = 219
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+V FD + +RPA L L S + + ++ GH D +GS + + L +
Sbjct: 98 ITVAADALFDFNKAVLRPAGKAKLDELVSKAKAIKLEVILAVGHTDRIGSDSYNQKLSEK 157
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK----------NRRAIVFLK 154
RA AV Y VA+GI A+R+ G++ P G AK +RR + +
Sbjct: 158 RAAAVKEYLVAKGIEANRVYTEGKGEKQPV-TGDKCKGNAKTKALIDCLQPDRRVDIEVI 216
Query: 155 GCR 157
G +
Sbjct: 217 GTK 219
>gi|330955558|gb|EGH55818.1| OmpA/MotB [Pseudomonas syringae Cit 7]
Length = 265
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 28/69 (40%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
LI GHAD G ++ + RA +V F G+ +R+ G MP
Sbjct: 161 VLILGHADTSGPTEANQKISQERAQSVAAIFRLSGLERNRLSQRGMGAVMPRAANDSLQG 220
Query: 143 YAKNRRAIV 151
A NRR +
Sbjct: 221 RALNRRVEI 229
>gi|37704644|gb|AAR01594.1| OprF [Pseudomonas sp. MFY107]
Length = 316
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 50/119 (42%), Gaps = 4/119 (3%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD ++P + NL ++++
Sbjct: 198 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQ 257
Query: 79 HDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSV 135
+ +EGH D +G + L RRA AV + + ++R++ YG+ P
Sbjct: 258 YPSTTTTVEGHTDSVGPDAYNQKLSERRANAVKQVLTNQYGVESARVQSVGYGESRPVA 316
>gi|330894565|gb|EGH27226.1| OmpA/MotB [Pseudomonas syringae pv. mori str. 301020]
Length = 73
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 25/59 (42%)
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+ +L RRA +V V G+ +R+ YGKE P A NRR V +
Sbjct: 3 YNQSLSERRANSVRMALVRMGVDPARVVTMGYGKEYPVADNTSNSGRAMNRRVEVTISN 61
>gi|262038728|ref|ZP_06012088.1| OmpA/MotB domain-containing protein [Leptotrichia goodfellowii
F0264]
gi|261747280|gb|EEY34759.1| OmpA/MotB domain-containing protein [Leptotrichia goodfellowii
F0264]
Length = 362
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 36/106 (33%), Gaps = 4/106 (3%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHD--CDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
F A+ + L + + + + GH D GS + L + RA V
Sbjct: 246 FKVDGRVPNQAEAKDLGTIANVINQFADGGTIDFVGHTDSTGSNAYNQKLSVARAQNVAR 305
Query: 112 YFVARGISASRM--KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
G+ S +T G+ P+ + NRR +F +
Sbjct: 306 LLREYGLKNSISYGTITGKGESQPADTNNTVQGRYNNRRVELFFQN 351
>gi|221209716|ref|ZP_03582697.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1]
gi|221170404|gb|EEE02870.1| OmpA/MotB domain protein [Burkholderia multivorans CGD1]
Length = 405
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
Query: 83 FLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ G+AD + + S+ A+ RA V VA G+ A ++V G
Sbjct: 329 VRVVGYADSAPAGSARQVSNQAISEARAEDVARILVAAGVPAHGLRVEGRGDADALADNG 388
Query: 139 DEDAYAKNRRAIVFL 153
E A+NRR V +
Sbjct: 389 TESGRARNRRVEVIV 403
>gi|71906104|ref|YP_283691.1| OmpA/MotB [Dechloromonas aromatica RCB]
gi|71845725|gb|AAZ45221.1| OmpA/MotB [Dechloromonas aromatica RCB]
Length = 217
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+V FD + +RPA L L S + + ++ GH D +GS + + L +
Sbjct: 96 ITVAADALFDFNKAVLRPAGKAKLDELVSKAKAIKLEVILAVGHTDRIGSDSYNQKLSEK 155
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK----------NRRAIVFLK 154
RA AV Y VA+GI A+R+ G++ P G AK +RR + +
Sbjct: 156 RAAAVKEYLVAKGIEANRVYTEGKGEKQPV-TGDKCKGNAKTKALIDCLQPDRRVDIEVI 214
Query: 155 GCR 157
G +
Sbjct: 215 GTK 217
>gi|88859106|ref|ZP_01133747.1| putative assembly or transport protein for curli synthesis
[Pseudoalteromonas tunicata D2]
gi|88819332|gb|EAR29146.1| putative assembly or transport protein for curli synthesis
[Pseudoalteromonas tunicata D2]
Length = 417
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 6/141 (4%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSS-----VGDSVFFDTSSYSIRPADIQVLSNLGSWLE- 77
+ + + + EQ + S + +V F T S + P + L+++ S ++
Sbjct: 276 RKNQTKTVIATPTKEATTEQLALSKNTNALSFAVQFRTGSAQLEPVYSEQLNSIVSLVKS 335
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
++G AD+ G + +L L R+++V Y +GI R+ V G E
Sbjct: 336 TDYLAIELQGFADQRGLEQENRSLSLARSHSVAQYLNNQGIVQQRISVAGLGDEQAVYQV 395
Query: 138 HDEDAYAKNRRAIVFLKGCRA 158
D + +RR IV L R+
Sbjct: 396 TDPEGLFFDRRVIVKLIDTRS 416
>gi|313498243|gb|ADR59609.1| OmpA/MotB domain protein [Pseudomonas putida BIRD-1]
Length = 435
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 47/130 (36%), Gaps = 5/130 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH---DCDF 83
++ + + + + + F S S+ ++ + + +L +
Sbjct: 307 SVAPQGDMPPPYRTLARQAQRLSVNFRFQEGSASLDNKALRDVQRVTEYLRQAGKLQGKA 366
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
++ G D + + L RA AV G+ ++VT G E+P E
Sbjct: 367 VLVGFGDPKETPGRAALLSRLRAQAVRRELARGGVEV--LQVTGMGDELPVAGNELEQGR 424
Query: 144 AKNRRAIVFL 153
+NRR V++
Sbjct: 425 LRNRRVEVWV 434
>gi|84502861|ref|ZP_01000974.1| OmpA family protein [Oceanicola batsensis HTCC2597]
gi|84388844|gb|EAQ01714.1| OmpA family protein [Oceanicola batsensis HTCC2597]
Length = 191
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/101 (30%), Positives = 44/101 (43%), Gaps = 6/101 (5%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FF T Y I PA+ Q L+ + F+I GH D S ++ L RA AV
Sbjct: 93 FFATDKYYISPANRQRLAE--FFKSSTATAFIIAGHTDSRASDEYNMRLSYNRANAVA-- 148
Query: 113 FVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ +R+ V YG+ MP+ + AKNRR +
Sbjct: 149 -RVAAATGARIADVRGYGERMPAATNNTRAGMAKNRRVEII 188
>gi|327193535|gb|EGE60427.1| hypothetical conserved membrane protein [Rhizobium etli CNPAF512]
Length = 246
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 40/108 (37%), Gaps = 4/108 (3%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLR 104
V V F S +I P +L L S +++ D I GH D G + L +
Sbjct: 137 DQVNYRVQFAFDSSAIAPKQKPMLQKLCSVVKEMDIKLIRIVGHTDASGGARYNQNLSML 196
Query: 105 RAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA V +F R++ G++ P + +NRR
Sbjct: 197 RAREVARFFTEDCHIPPERLEAVGVGEQFPLDPQKPKAD--ENRRVEF 242
>gi|148475218|dbj|BAF63175.1| major outer membrane protein ompAII [Aeromonas veronii]
Length = 332
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 49/123 (39%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPA---DIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F +++P + L ++ D ++ G+ D +GS + L
Sbjct: 206 ALSSDVLFAFGKSTLKPEGVAALNTLYQQIVDVQPKDGSAVVVGYTDRIGSDAYNQKLSE 265
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RA V ++ V +G+ A ++ + G+ P + A+ +RR V +
Sbjct: 266 ARARTVADFLVGKGLPAGKVAIEGRGEANPVTGTQCNSVKGKAQLISCLAPDRRVEVRVT 325
Query: 155 GCR 157
G +
Sbjct: 326 GVQ 328
>gi|194336954|ref|YP_002018748.1| OmpA/MotB domain protein [Pelodictyon phaeoclathratiforme BU-1]
gi|194309431|gb|ACF44131.1| OmpA/MotB domain protein [Pelodictyon phaeoclathratiforme BU-1]
Length = 519
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 5/113 (4%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLG---SWLEKHDCDFLIEGHADELGSRNSSIAL 101
++ + F S + + + + S + D ++ G AD GS + L
Sbjct: 409 ATEIATRFRFRADSEVLDTRANRDIGRIVAVLSQPKYKDKRVVLIGFADAAGSIKHNKEL 468
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+RA V + G+ + +VT G E ++ KNRR V++K
Sbjct: 469 AQKRAEVVATALIEEGVQCA--EVTGVGAEAFVAPNDTQENREKNRRIEVWVK 519
>gi|42527533|ref|NP_972631.1| OmpA family protein [Treponema denticola ATCC 35405]
gi|41818118|gb|AAS12542.1| OmpA family protein [Treponema denticola ATCC 35405]
Length = 1338
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 41/124 (33%), Gaps = 12/124 (9%)
Query: 42 EQFSSSVGDSVFFD-------TSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
++ +V +F + + + + +EGHA+
Sbjct: 1212 DKLKIAVPSIIFRANAADFEGLDKAIVDKNKSILKRIAVILNKFPEYQVQVEGHANTTTG 1271
Query: 95 RNSSI-----ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
L +RA AV + + G+ +SR+ G P +D D + KNRR
Sbjct: 1272 TEKEETTALLPLSKQRAEAVRQFLIKEGLKSSRLSSIGMGSSKPVASLNDRDNWWKNRRV 1331
Query: 150 IVFL 153
L
Sbjct: 1332 EFIL 1335
>gi|119896920|ref|YP_932133.1| hypothetical protein azo0629 [Azoarcus sp. BH72]
gi|119669333|emb|CAL93246.1| conserved hypothetical secreted protein [Azoarcus sp. BH72]
Length = 198
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 57/140 (40%), Gaps = 1/140 (0%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL-GS 74
+S++ + ++ ++F+T++ + P L +
Sbjct: 59 VSLAASPAPVATTQETLSSDFGPAMAALPPPPTSFLLYFETAAARLTPESRNQLPRVLAQ 118
Query: 75 WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
+ D I GH D +GS + ALGL RA V A G++A + VTS+G+
Sbjct: 119 VRSRPAPDISIIGHTDTVGSNADNEALGLVRARTVLKLLEAAGVTAREITVTSHGERNLL 178
Query: 135 VYGHDEDAYAKNRRAIVFLK 154
V D A+NRR V ++
Sbjct: 179 VPTADNTDEARNRRVEVTVR 198
>gi|332520508|ref|ZP_08396970.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
gi|332043861|gb|EGI80056.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
Length = 743
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 5/108 (4%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
++ +D S ++ PA + + + I H D GS+ S+ +L RRA AV
Sbjct: 632 NINWDLGSATLTPAARAEIDRILLPVLADGVSVEIASHTDSRGSKASNRSLSERRAQAVT 691
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGH-----DEDAYAKNRRAIVFL 153
NY +++GI++SR+ +G+ E + NRR +
Sbjct: 692 NYLISKGINSSRIVSNGFGESRLLNNCSDGVSCTERDHRINRRTQFRV 739
>gi|84683658|ref|ZP_01011561.1| flagellar motor protein [Maritimibacter alkaliphilus HTCC2654]
gi|84668401|gb|EAQ14868.1| flagellar motor protein [Rhodobacterales bacterium HTCC2654]
Length = 617
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 41/126 (32%), Gaps = 14/126 (11%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIEGHADELG 93
E V F + A Q ++ + L + ++GH D
Sbjct: 489 EGDRFVFSSEVLFPVGGADLSAAGRQQIARVAGTLRDVASEIPPEINWILRVDGHTDSQP 548
Query: 94 S-----RNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+ L RA +V Y + G R+ +G+ P G ++A A NR
Sbjct: 549 FRGNAEYADNWELSQARALSVVRYMQDQLGFPPDRLVAAGFGEWQPIAEGDSDEALAANR 608
Query: 148 RAIVFL 153
R + L
Sbjct: 609 RIELKL 614
>gi|323698017|ref|ZP_08109929.1| OmpA/MotB domain protein [Desulfovibrio sp. ND132]
gi|323457949|gb|EGB13814.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans ND132]
Length = 240
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 47/125 (37%), Gaps = 2/125 (1%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
+ + + ++ +FFD +S ++P L +G + + G AD
Sbjct: 112 TNGITVVREAPGRVRVTLRGDLFFDGNSGRLKPESAAYLDEIGDVVRLSVGLVHVIGFAD 171
Query: 91 -ELGSRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
+SS L RA +V + + R GI R+ +T G P + NRR
Sbjct: 172 QSEAEGSSSFTLSSERAASVADQLITRLGIEPKRLVITGRGAYQPELPDTSAANQTLNRR 231
Query: 149 AIVFL 153
+ +
Sbjct: 232 VEIVI 236
>gi|90413203|ref|ZP_01221198.1| hypothetical protein P3TCK_16554 [Photobacterium profundum 3TCK]
gi|90325755|gb|EAS42213.1| hypothetical protein P3TCK_16554 [Photobacterium profundum 3TCK]
Length = 168
Score = 56.4 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 15/166 (9%)
Query: 1 MQ--YSTIFIILSAITMMSISGIDN--LDTKISSPDT--------VLNESSLQEQFSSSV 48
M+ T+ I L +T+++ D D I D + +++ + +
Sbjct: 1 MKVFLRTVCITL-LLTLLAGCATDTYVSDENIDKFDDLSVKKFLIAEIQPTVEPEKKIYL 59
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
FD ++P DI L + + + +I GH D GS + + L RR+
Sbjct: 60 SLVSHFDFDKSILKPEDIAELDDFIAKVINLKGHIVIAGHTDYQGSDDYNEKLSFRRSTV 119
Query: 109 VFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRR-AIVF 152
+ Y AR +V +G+ P V H A A NRR ++F
Sbjct: 120 IQQYLSARISVENYTFEVAYFGENNPIVKAHSLKANALNRRGIVIF 165
>gi|37704652|gb|AAR01598.1| OprF [Pseudomonas sp. MFY140]
Length = 320
Score = 56.0 bits (133), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 50/119 (42%), Gaps = 4/119 (3%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D ++P V ++ + V V FD ++P + NL ++++
Sbjct: 202 CDNVDKCPNTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQ 261
Query: 79 HDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSV 135
+ +EGH D +G + L R A AV + + ASR++ YG+ P
Sbjct: 262 YPSTTTTVEGHTDSVGPDAYNQKLSERLANAVKQVLTNQYGVEASRVQSVGYGESRPVA 320
>gi|255035472|ref|YP_003086093.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
18053]
gi|254948228|gb|ACT92928.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
Length = 314
Score = 56.0 bits (133), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 37/84 (44%)
Query: 72 LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
L E +E H D +G ++ L RA + Y V IS SR++ G
Sbjct: 230 LNCLSENRSVKITLESHTDNVGDLKKNLRLAEERAARIRQYLVDNKISESRIQCRILGPL 289
Query: 132 MPSVYGHDEDAYAKNRRAIVFLKG 155
+P ++E + NRR +V ++G
Sbjct: 290 LPLAPNNNEYNRSLNRRIVVKVQG 313
>gi|89889717|ref|ZP_01201228.1| hypothetical protein BBFL7_01535 [Flavobacteria bacterium BBFL7]
gi|89517990|gb|EAS20646.1| hypothetical protein BBFL7_01535 [Flavobacteria bacterium BBFL7]
Length = 352
Score = 56.0 bits (133), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 45/121 (37%), Gaps = 8/121 (6%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGL 103
+V SV+FD ++ + L++ + K I G+ D+ GS ++ L
Sbjct: 19 QITVTHSVYFDVDKDQFSFSEGKQLTSFFDDLIYKPILTVKILGYCDDRGSHEYNLDLSN 78
Query: 104 RRAYAVFNYFVARGISASRMK--VTSYGK---EMPSVYGHDEDAYAKNRR--AIVFLKGC 156
RR V + I + V G+ E + E+ A+NRR L
Sbjct: 79 RRVETVSEWLENHDIELENISKKVEGLGEVALEDELDFQETEEIRAQNRRVDVEFSLSAD 138
Query: 157 R 157
R
Sbjct: 139 R 139
Score = 42.1 bits (97), Expect = 0.025, Method: Composition-based stats.
Identities = 17/113 (15%), Positives = 36/113 (31%), Gaps = 14/113 (12%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLG-------SWLEKHDCDFLIE--GHADELGSRNSSIA 100
+++ F +I +L + + + D
Sbjct: 237 ENILFYKGRSTILEESQPLLDRVAEILIAREDIHFEIHGHVCCINPAYPDAYNRDTKKSN 296
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA A++ +RG+ +RM+ YG+ P +RR +++
Sbjct: 297 LSHARALAIYKILRSRGVKHTRMRFKGYGRTRPLGGID-----KLDRRVELYI 344
>gi|3282021|emb|CAA07454.1| outer membrane protein [Haemophilus sp.]
Length = 360
Score = 56.0 bits (133), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 54/138 (39%), Gaps = 10/138 (7%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGH 88
+ + + ++ V F +++P L + + + + + G+
Sbjct: 223 QGAAPVVAAPEVVSKTFNLNSDVNFAFGKANLKPQAQAALDGIYGEIAQVNSAKVAVAGY 282
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY--- 143
D +GS ++ L +RA V NYFVA+G+SA + T YGK P
Sbjct: 283 TDRIGSDAFNVKLSQQRAETVANYFVAKGVSADAISATGYGKANPVTGATCDQVKGRKAL 342
Query: 144 ----AKNRRAIVFLKGCR 157
A +RR + + G +
Sbjct: 343 IACLAPDRREEIAVNGTK 360
>gi|37704672|gb|AAR01608.1| OprF [Pseudomonas sp. MFY245]
Length = 314
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 4/119 (3%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD ++ + NL ++++
Sbjct: 196 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKENSYGDIKNLADFMKQ 255
Query: 79 HDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSV 135
+ +EGH D +G + L RRA AV + + +SR++ YG+ P
Sbjct: 256 YPSTTTTVEGHTDSVGPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSVGYGESRPVA 314
>gi|77465487|ref|YP_354990.1| OmpA family outer membrane protein [Rhodobacter sphaeroides 2.4.1]
gi|77389905|gb|ABA81089.1| Possible outer membrane protein, OmpA family [Rhodobacter
sphaeroides 2.4.1]
Length = 453
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 13/113 (11%), Positives = 36/113 (31%), Gaps = 8/113 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGS---WLEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
D F ++ + +++++ + + + GH D + + S+ +
Sbjct: 338 DPELFRSARAEVNADYAPLVASVAAVLAENRELVGAVRVIGHTDNVPVQRSNPFASNQGL 397
Query: 107 YAVFNYFVARGI-----SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+A + A + + P A+NRR + ++
Sbjct: 398 SEARAATLAALLVEGGVPAGIVTAEGHADSEPVADNATRAGRAQNRRVEIRIE 450
>gi|26987864|ref|NP_743289.1| OmpA/MotB domain protein [Pseudomonas putida KT2440]
gi|24982567|gb|AAN66753.1|AE016303_8 OmpA family protein [Pseudomonas putida KT2440]
Length = 344
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 32/71 (45%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
L+ GHAD G+ ++ L L RA +V F G+ R+ + G MP +
Sbjct: 181 VLVLGHADSSGAAVANQKLSLERAASVSAIFRLSGLQRDRLTLKGMGSVMPRAANDSAEG 240
Query: 143 YAKNRRAIVFL 153
A NRR + L
Sbjct: 241 RALNRRVEMLL 251
>gi|84687276|ref|ZP_01015156.1| OmpA family protein [Maritimibacter alkaliphilus HTCC2654]
gi|84664709|gb|EAQ11193.1| OmpA family protein [Rhodobacterales bacterium HTCC2654]
Length = 222
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 21/152 (13%)
Query: 5 TIFIILSAITMMSISGIDNLDTKISSPDTVLNE-------------------SSLQEQFS 45
I SA+ +M+ D + E L E+F+
Sbjct: 8 KIVATTSALALMAGCATDKTYLGEAGAIPARAEFGSATENNYLIQTGQKSYVVDLAERFN 67
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLR 104
V D+V F+ +S + Q+L+ S++ + F + GH D++GS + LGLR
Sbjct: 68 REVPDTVNFEFNSAVLDGQARQILARQASFIRQFPEVHFRVYGHTDKVGSNAYNRQLGLR 127
Query: 105 RAYAVFNYFVARGISASRMKV-TSYGKEMPSV 135
RA AV NYF ++GIS SR++ +YG+ P V
Sbjct: 128 RAQAVVNYFASQGISRSRVEAVVTYGETQPLV 159
>gi|148547176|ref|YP_001267278.1| OmpA/MotB domain-containing protein [Pseudomonas putida F1]
gi|148511234|gb|ABQ78094.1| OmpA/MotB domain protein [Pseudomonas putida F1]
Length = 435
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 46/130 (35%), Gaps = 5/130 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH---DCDF 83
++ + + + + + F S + ++ + + +L +
Sbjct: 307 SVAPQSDMPPRYRILALQAQRLSVNFRFQEGSARLDNKALRDVQRVAEYLRQAGKLQGKA 366
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
++ G D + + L RA AV G+ ++VT G E+P E
Sbjct: 367 VLVGFGDPKETPGRAALLSRLRAQAVRRELARGGVEV--LQVTGMGDELPVAGNEQEQGR 424
Query: 144 AKNRRAIVFL 153
+NRR V++
Sbjct: 425 LRNRRVEVWV 434
>gi|323492706|ref|ZP_08097850.1| outer membrane protein [Vibrio brasiliensis LMG 20546]
gi|323313081|gb|EGA66201.1| outer membrane protein [Vibrio brasiliensis LMG 20546]
Length = 279
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 53/144 (36%), Gaps = 3/144 (2%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
+ ++ ++ S + F +S + P + L+ + +
Sbjct: 126 TSQAKCVPPMDENAFQQRLAIIDKLYSLLNVDNQFAFNSTEVNPKYMGHLARAANLLEQH 185
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ GHAD +G + L + RA V Y + G+S R+K S G +P G
Sbjct: 186 SSLSLAVTGHADSVGDLAYNQKLAMGRAQQVKRYLIIFGLSPERIKTHSVGDTLPLYEGE 245
Query: 139 DEDAYAKNRRAIVFLKG--CRANT 160
E NRR + + RA++
Sbjct: 246 SEGVRLTNRRVSIEVIDNQERADS 269
>gi|161520471|ref|YP_001583898.1| DotU family type IV/VI secretion system protein [Burkholderia
multivorans ATCC 17616]
gi|189353338|ref|YP_001948965.1| putative OmpA/MotB family outer membrane protein [Burkholderia
multivorans ATCC 17616]
gi|160344521|gb|ABX17606.1| type IV / VI secretion system protein, DotU family [Burkholderia
multivorans ATCC 17616]
gi|189337360|dbj|BAG46429.1| putative OmpA/MotB family outer membrane protein [Burkholderia
multivorans ATCC 17616]
Length = 405
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 4/75 (5%)
Query: 83 FLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ G+AD + + S+ AL RA V VA G+ A ++V G
Sbjct: 329 VRVVGYADSAPAGSARQVSNQALSEARAEDVARILVAAGVPAHGLRVEGRGDADALADNG 388
Query: 139 DEDAYAKNRRAIVFL 153
E A+NRR V +
Sbjct: 389 TESGRARNRRVEVIV 403
>gi|330975634|gb|EGH75700.1| OmpA/MotB [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 250
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHA 89
+T + +Q + ++ F T S +I + L+NL S + + + I G+
Sbjct: 98 ANTGVEVQRQGDQIKLIMPGNITFATDSSAIASSFYSPLNNLASSLKQFNQNNIEIVGYT 157
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
D GSR ++ L +RA +V Y ++G+ + + V G + P D
Sbjct: 158 DSTGSRQHNMDLSQQRAQSVATYLTSQGVDQAHLSVRGAGPDQPIASNAD 207
>gi|152982349|ref|YP_001354513.1| hypothetical protein mma_2823 [Janthinobacterium sp. Marseille]
gi|151282426|gb|ABR90836.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
Length = 1376
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 37/136 (27%), Gaps = 13/136 (9%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-----CDFLI 85
V + + F + + P+ + L L + + +
Sbjct: 72 AAQVPAAQADMSKSLQEAKGLSLFVSGKADLTPSAKESLDALVAEIHARKGVIAGMRIAV 131
Query: 86 EGHADEL-------GSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYG 137
GH D + L RA V Y A A + G+ P
Sbjct: 132 VGHTDNQGLSPNAKRIFTDNQGLSEARALTVAAYLKQALNNPAITYSIDGKGESQPLASN 191
Query: 138 HDEDAYAKNRRAIVFL 153
+ ++NRR + +
Sbjct: 192 ATPEGMSRNRRVALQV 207
>gi|149918662|ref|ZP_01907150.1| outer membrane protein, OmpA/MotB family [Plesiocystis pacifica
SIR-1]
gi|149820503|gb|EDM79917.1| outer membrane protein, OmpA/MotB family [Plesiocystis pacifica
SIR-1]
Length = 158
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 54/143 (37%), Gaps = 10/143 (6%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSV----GDSVFFDTSSYSIRPADIQVLSNLG 73
++ ++ P+ + D +F S + + L+ L
Sbjct: 17 LAATRPVEPGADDPENPMMGKLRIADNIVDACLLPRDEAYFAYDSAEVSDKAERTLTLLA 76
Query: 74 SWLEKHDCD---FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
+ ++ GH D GS ++ LGL+R+ AV +Y V G+ R++ S G+
Sbjct: 77 QCFDTGPMRYQGLVVVGHTDPRGSNEYNLDLGLQRSVAVKDYLVDEGVEGGRIETRSLGE 136
Query: 131 EMPSVYGHDEDAYAKNRRAIVFL 153
D + ++ +R+ + L
Sbjct: 137 RR---ASDDPEDWSDDRKVEIKL 156
>gi|167581046|ref|ZP_02373920.1| OmpA family protein [Burkholderia thailandensis TXDOH]
Length = 200
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 9/121 (7%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FD ++PA Q L L + ++ + + ++ G+ D +GS + L LR
Sbjct: 70 ITYQADTLFDFDKAILKPAGKQKLDELAAKIQGMNVEVVVATGYTDRIGSDKYNDRLSLR 129
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE--------DAYAKNRRAIVFLKGC 156
RA AV +Y V++G+ A+++ GK P + A +RR V + G
Sbjct: 130 RAQAVKSYLVSKGVPANKVYTEGKGKRNPITGNTCKQKNRKQLIACLAPDRRVEVEVVGT 189
Query: 157 R 157
+
Sbjct: 190 Q 190
>gi|37704638|gb|AAR01591.1| OprF [Pseudomonas sp. MFY81]
gi|37704640|gb|AAR01592.1| OprF [Pseudomonas sp. MFY82]
Length = 316
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 50/119 (42%), Gaps = 4/119 (3%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD ++P + NL ++++
Sbjct: 198 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQ 257
Query: 79 HDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSV 135
+ +EGH D +G + L RRA AV + + +SR++ YG+ P
Sbjct: 258 YPSTTTTVEGHTDSVGPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSVGYGESRPVA 316
>gi|304383837|ref|ZP_07366295.1| OmpA family protein [Prevotella marshii DSM 16973]
gi|304335093|gb|EFM01365.1| OmpA family protein [Prevotella marshii DSM 16973]
Length = 689
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 46/137 (33%), Gaps = 28/137 (20%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGL 103
+ + D++F+D + ++RP L L E + H D GS + L
Sbjct: 515 APVLIDNIFYDFNRATLRPESTAALDELVKLLQENPHVTIELRAHCDYRGSDIYNKVLSQ 574
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMP---------------------------SVY 136
RRA AV Y VA GI+ R+ YGKE P
Sbjct: 575 RRAEAVTAYLVAHGIAKDRLSPVGYGKERPKIIRRKLTERYPWMKEGDVLSESYIKRLDA 634
Query: 137 GHDEDAYAKNRRAIVFL 153
+ NRR +
Sbjct: 635 SRQDVCNQLNRRTEFIV 651
>gi|37704604|gb|AAR01574.1| OprF [Pseudomonas sp. MFY32]
Length = 316
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 50/119 (42%), Gaps = 4/119 (3%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD ++P + NL ++++
Sbjct: 198 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQ 257
Query: 79 HDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSV 135
+ +EGH D +G + L RRA AV + + ++R++ YG+ P
Sbjct: 258 YPSTTTTVEGHTDSVGPDAYNQKLSERRANAVKQVLTNQYGVESARVQSVGYGESRPVA 316
>gi|218676771|ref|YP_002395590.1| hypothetical protein VS_II1010 [Vibrio splendidus LGP32]
gi|218325039|emb|CAV26876.1| Conserved hypothetical protein [Vibrio splendidus LGP32]
Length = 751
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 41/133 (30%), Gaps = 7/133 (5%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW--LEKHDCDFLI 85
S + LN + Q + + F S S L LG I
Sbjct: 572 GDSDELSLNTEVKKGQHIFELRSTTFAFDRSNSDNRKARDSLIELGGILSQIHRPIPITI 631
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYF-----VARGISASRMKVTSYGKEMPSVYGHDE 140
+GH GS + L RA + + + ++ G+ P V E
Sbjct: 632 KGHTCSRGSIEYNQTLSEERAIYIRECILEGITSNQAAWKTCIRTIGLGERDPLVPNDSE 691
Query: 141 DAYAKNRRAIVFL 153
D +NRR + L
Sbjct: 692 DQRRRNRRVDLLL 704
>gi|121601320|ref|YP_993883.1| OmpA family protein [Burkholderia mallei SAVP1]
gi|167720677|ref|ZP_02403913.1| ompA family protein [Burkholderia pseudomallei DM98]
gi|167739663|ref|ZP_02412437.1| ompA family protein [Burkholderia pseudomallei 14]
gi|167816870|ref|ZP_02448550.1| ompA family protein [Burkholderia pseudomallei 91]
gi|167846773|ref|ZP_02472281.1| ompA family protein [Burkholderia pseudomallei B7210]
gi|167895360|ref|ZP_02482762.1| ompA family protein [Burkholderia pseudomallei 7894]
gi|167903747|ref|ZP_02490952.1| ompA family protein [Burkholderia pseudomallei NCTC 13177]
gi|254192034|ref|ZP_04898534.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237]
gi|121230130|gb|ABM52648.1| OmpA family protein [Burkholderia mallei SAVP1]
gi|157987856|gb|EDO95621.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237]
Length = 209
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/156 (21%), Positives = 62/156 (39%), Gaps = 11/156 (7%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS 70
A G +P + + ++ + FD ++PA Q L
Sbjct: 46 PATANAKCDGALVAQAPAPAPVAPVAPAITSQK--ITYQADTLFDFDKAVLKPAGKQKLD 103
Query: 71 NLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
L + ++ + + ++ G+ D +GS + L LRRA AV +Y V++G+ A+++ G
Sbjct: 104 ELAAKIQGMNVEVVVATGYTDRIGSDKYNDRLSLRRAQAVKSYLVSKGVPANKVYTEGKG 163
Query: 130 KEMPSVYGHDE--------DAYAKNRRAIVFLKGCR 157
K P + A +RR V + G +
Sbjct: 164 KRNPVTGNTCKQKNRKQLIACLAPDRRVEVEVVGTQ 199
>gi|282881633|ref|ZP_06290296.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1]
gi|281304392|gb|EFA96489.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1]
Length = 717
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 47/138 (34%), Gaps = 28/138 (20%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
D++F+D ++R + L +L E + H D GS+ + L RRA A
Sbjct: 547 DNIFYDFDKATLRLESKKALDDLVKLLNENSHVTIELSAHCDYKGSKEYNQRLAQRRAEA 606
Query: 109 VFNYFVARGISASRMKVTSYGKEMP---------------------------SVYGHDED 141
V Y + +GI+ R+K YGKE P E
Sbjct: 607 VVRYLIDKGIAKDRLKPVGYGKEKPKTIRKKLTERYPWLKEGDVLSEEFIKTLDAEKQEI 666
Query: 142 AYAKNRRAIVFLKGCRAN 159
NRR + N
Sbjct: 667 CNQLNRRTEFSVLRTTYN 684
>gi|37704676|gb|AAR01610.1| OprF [Pseudomonas sp. MFY315]
Length = 316
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 50/119 (42%), Gaps = 4/119 (3%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD ++P + NL ++++
Sbjct: 198 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQ 257
Query: 79 HDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSV 135
+ +EGH D +G + L RRA AV + + +SR++ YG+ P
Sbjct: 258 YPSTTTTVEGHTDSVGPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSVGYGESRPVA 316
>gi|237798824|ref|ZP_04587285.1| ompA family protein [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331021677|gb|EGI01734.1| ompA family protein [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 389
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 28/69 (40%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
L+ GH D G ++ + RA +V F G+ +R+ + G MP
Sbjct: 217 VLVLGHGDTSGPTEANQKISQERAQSVAAIFRLSGLERNRLSLRGMGAVMPRAANDSLQG 276
Query: 143 YAKNRRAIV 151
A NRR +
Sbjct: 277 RALNRRVEI 285
>gi|37704602|gb|AAR01573.1| OprF [Pseudomonas sp. MFY31]
Length = 316
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 50/119 (42%), Gaps = 4/119 (3%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD ++P + NL ++++
Sbjct: 198 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQ 257
Query: 79 HDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSV 135
+ +EGH D +G + L RRA AV + + ++R++ YG+ P
Sbjct: 258 YPSTTTTVEGHTDSVGPDAYNQKLSERRANAVKQVLTNQYGVESARVQSVGYGESRPVA 316
>gi|25298554|pir||E84968 outer membrane protein A precursor [imported] - Buchnera sp.
(strain APS)
Length = 349
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 62/145 (42%), Gaps = 19/145 (13%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD- 82
+ IS + + L EQ+S + +++ F +S ++P+ L+ L ++
Sbjct: 204 GKSDISDMFSSDDSEPLNEQYSV-LNENINFPFNSTELKPSSYDKLNKLDDDIKDMQLKN 262
Query: 83 --FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++ GHAD++GS L RAY++ NY +RG S ++ V GK P ++
Sbjct: 263 VSIVLLGHADKIGSDEYXQKLSEDRAYSIKNYLASRGFSRDKITVKGMGKLYPL---TNQ 319
Query: 141 DAY------------AKNRRAIVFL 153
A +RR + +
Sbjct: 320 VCRDVVNKPLLISCLAPDRRVEIEV 344
>gi|330984878|gb|EGH82981.1| OmpA family protein [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 381
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 28/69 (40%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
LI GHAD G ++ + RA +V F G+ +R+ G MP
Sbjct: 215 VLILGHADTSGPTEANQKISQERAQSVAAIFRLSGLERNRLSQRGMGAVMPRAANDSLQG 274
Query: 143 YAKNRRAIV 151
A NRR +
Sbjct: 275 RALNRRVEI 283
>gi|298488773|ref|ZP_07006801.1| OmpA family protein [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|298156691|gb|EFH97783.1| OmpA family protein [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
Length = 376
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 28/69 (40%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
LI GHAD G ++ + RA +V F G+ +R+ G MP
Sbjct: 215 VLILGHADTSGPTEANQKISQERAQSVAAIFRLSGLERNRLSQRGMGAVMPRAANDSLQG 274
Query: 143 YAKNRRAIV 151
A NRR +
Sbjct: 275 RALNRRVEI 283
>gi|300023926|ref|YP_003756537.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888]
gi|299525747|gb|ADJ24216.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888]
Length = 262
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 1/147 (0%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
A++ + G D + + F SVGD VFF SS + + ++
Sbjct: 84 ALSSLGSDGDTEEGRAAIRADEAERTAEYRHAFLISVGDRVFFAESSAELGGRALAIIEG 143
Query: 72 LGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
WL+ + + + G +D+ G R S+ L +RA AV + +A G+ ASR+ + G
Sbjct: 144 QARWLKLRPNLTITVIGRSDDGGDRRSAQTLSKQRAEAVRDRLIAAGLDASRVDLRPTGN 203
Query: 131 EMPSVYGHDEDAYAKNRRAIVFLKGCR 157
+ A+NR A VF+ R
Sbjct: 204 DDKVAVCSTSMCRAQNRNAEVFINDLR 230
>gi|239906204|ref|YP_002952943.1| chemotaxis protein MotB [Desulfovibrio magneticus RS-1]
gi|239796068|dbj|BAH75057.1| chemotaxis protein MotB [Desulfovibrio magneticus RS-1]
Length = 250
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 46/119 (38%), Gaps = 5/119 (4%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNS 97
SS + + + F S + ++++ + ++ ++ +I GHAD +
Sbjct: 118 SSDDVGVLLRLQNGMLFAPGSAELTEQAKKLMAEVVDVMKTYNVFLIIRGHADAAEAAKG 177
Query: 98 SIALGLR-----RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
A A A GI ASR++ +YG P + + +A A NRR
Sbjct: 178 HFASNWELSGARAAAAARAVIAGGGIQASRVRAVAYGDSRPLMPETNPEAAAANRRVEF 236
>gi|331010144|gb|EGH90200.1| OmpA family protein [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 381
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 28/69 (40%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
LI GHAD G ++ + RA +V F G+ +R+ G MP
Sbjct: 215 VLILGHADTSGPTEANQKISQERAQSVAAIFRLSGLERNRLSQRGMGAVMPRAANDSLQG 274
Query: 143 YAKNRRAIV 151
A NRR +
Sbjct: 275 RALNRRVEI 283
>gi|289627038|ref|ZP_06459992.1| OmpA family protein [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289647994|ref|ZP_06479337.1| OmpA family protein [Pseudomonas syringae pv. aesculi str. 2250]
gi|330867282|gb|EGH01991.1| OmpA family protein [Pseudomonas syringae pv. aesculi str. 0893_23]
Length = 381
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 28/69 (40%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
LI GHAD G ++ + RA +V F G+ +R+ G MP
Sbjct: 215 VLILGHADTSGPTEANQKISQERAQSVAAIFRLSGLERNRLSQRGMGAVMPRAANDSLQG 274
Query: 143 YAKNRRAIV 151
A NRR +
Sbjct: 275 RALNRRVEI 283
>gi|251792474|ref|YP_003007200.1| Plp4 [Aggregatibacter aphrophilus NJ8700]
gi|247533867|gb|ACS97113.1| Plp4 [Aggregatibacter aphrophilus NJ8700]
Length = 278
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 8/117 (6%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRR 105
S+ FD ++ +V+ + + L++ + G+ D LGS + ++ L RR
Sbjct: 138 SLTADFLFDFDKDTLTEKGKEVVDKVAAQLKESKAQEVKVAGYTDRLGSESYNMDLSQRR 197
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK------NRRAIVFLKGC 156
A V +G+ A ++ +G+ +E NRR + G
Sbjct: 198 ANRVKARLTEQGVDA-QISAVGHGEAHQVKACSNEKGNKLISCLRPNRRVEISSSGT 253
>gi|148546407|ref|YP_001266509.1| OmpA/MotB domain-containing protein [Pseudomonas putida F1]
gi|148510465|gb|ABQ77325.1| OmpA/MotB domain protein [Pseudomonas putida F1]
Length = 325
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 32/71 (45%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
L+ GHAD G+ ++ L L RA +V F G+ R+ + G MP +
Sbjct: 162 VLVLGHADSSGAAVANQKLSLERAASVSAIFRLSGLQRDRLTLKGMGSVMPRAANDSAEG 221
Query: 143 YAKNRRAIVFL 153
A NRR + L
Sbjct: 222 RALNRRVEMLL 232
>gi|320325666|gb|EFW81728.1| OmpA family protein [Pseudomonas syringae pv. glycinea str. B076]
Length = 381
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 28/69 (40%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
LI GHAD G ++ + RA +V F G+ +R+ G MP
Sbjct: 215 VLILGHADTSGPTEANQKISQERAQSVAAIFRLSGLERNRLSQRGMGAVMPRAANDSLQG 274
Query: 143 YAKNRRAIV 151
A NRR +
Sbjct: 275 RALNRRVEI 283
>gi|310819072|ref|YP_003951430.1| outer membrane domain-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|309392144|gb|ADO69603.1| Outer membrane domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 480
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 56/140 (40%), Gaps = 4/140 (2%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+++ + P + Q + + F S + P + +L + L
Sbjct: 327 ALTREEPAGPAEDKPAEPIRPYVPTPQEKLVLRGDIHFVRGSSEL-PGVVPLLDQVILQL 385
Query: 77 EKHDC--DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
+IEGHAD G+ S + + LRRA AV Y + +G+ +++++ G P
Sbjct: 386 SGFSAGGTIVIEGHADTEGTDTSDMFMSLRRAQAVRRYLIDQGVPGTKVRIRGLGSHWPV 445
Query: 135 VY-GHDEDAYAKNRRAIVFL 153
E + NRRA V +
Sbjct: 446 SSKPATEQEHQLNRRAEVLV 465
>gi|239908713|ref|YP_002955455.1| hypothetical protein DMR_40780 [Desulfovibrio magneticus RS-1]
gi|239798580|dbj|BAH77569.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 1002
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 22/52 (42%)
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
L RA +V V GI A ++++ +G MP KNRR +
Sbjct: 949 LSQARAASVAEGLVKNGIDAGKVQIHGFGSAMPVSPNDTPFNREKNRRVEII 1000
>gi|254466910|ref|ZP_05080321.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
gi|206687818|gb|EDZ48300.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
Length = 192
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 3/100 (3%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFN 111
FF T+ + I A + L+ + + F+I GH D S +I L RRA AV
Sbjct: 91 FFATNKHQINAAGRKRLTEFFQKAQSNGARSFVIAGHTDSRASDEYNIGLSQRRANAVAQ 150
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ G + ++ YG+ P V AKNRR +
Sbjct: 151 VARSAGAHVNDIRA--YGEREPQVPNTSAANMAKNRRVEI 188
>gi|183219622|ref|YP_001837618.1| flagellar motor protein MotB [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189909761|ref|YP_001961316.1| flagellar motor protein MotB [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167774437|gb|ABZ92738.1| Endoflagellar motor protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167778044|gb|ABZ96342.1| Chemotaxis MotB protein [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
Length = 277
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 47/136 (34%), Gaps = 15/136 (11%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNS 97
S + S+ + +F S + PA + L ++ + +EGH+D+
Sbjct: 114 SENERGLVISLVGADYFYPGSAILTPAIRETLRKAAGLIKGLERFVRVEGHSDDDAVNPV 173
Query: 98 SIA-------------LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH--DEDA 142
S G R A A I S + S+G P V + +A
Sbjct: 174 SRPGREEREYINNWDLAGARAVNATVFMINAEEIEPSWFQAVSFGSYRPLVLENEGTPEA 233
Query: 143 YAKNRRAIVFLKGCRA 158
A NRR + + ++
Sbjct: 234 KAFNRRVDIIILTEKS 249
>gi|152990728|ref|YP_001356450.1| hypothetical protein NIS_0983 [Nitratiruptor sp. SB155-2]
gi|151422589|dbj|BAF70093.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
Length = 225
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 11/117 (9%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSS--------- 98
D VF DT SY + Q L + L+K + + + +
Sbjct: 106 FNDIVFKDT-SYQLTDRAKQTLKEIAQVLKKLPKNQKFYIKINGYATIKDASKLPPDIVD 164
Query: 99 -IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L ++RA AV Y + +GI SR ++ YG P ++ +N R ++++
Sbjct: 165 AWDLSIKRAEAVAFYLMKQGIDPSRFFISGYGDTRPIYSWNNPLLNRRNDRVEIYIE 221
>gi|115372572|ref|ZP_01459880.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
gi|115370534|gb|EAU69461.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
Length = 490
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 56/140 (40%), Gaps = 4/140 (2%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+++ + P + Q + + F S + P + +L + L
Sbjct: 337 ALTREEPAGPAEDKPAEPIRPYVPTPQEKLVLRGDIHFVRGSSEL-PGVVPLLDQVILQL 395
Query: 77 EKHDC--DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
+IEGHAD G+ S + + LRRA AV Y + +G+ +++++ G P
Sbjct: 396 SGFSAGGTIVIEGHADTEGTDTSDMFMSLRRAQAVRRYLIDQGVPGTKVRIRGLGSHWPV 455
Query: 135 VY-GHDEDAYAKNRRAIVFL 153
E + NRRA V +
Sbjct: 456 SSKPATEQEHQLNRRAEVLV 475
>gi|330831536|ref|YP_004394488.1| outer membrane protein A [Aeromonas veronii B565]
gi|328806672|gb|AEB51871.1| Outer membrane protein A [Aeromonas veronii B565]
Length = 364
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/121 (27%), Positives = 60/121 (49%), Gaps = 13/121 (10%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
S+ V F+ + +++PA Q L L S + + + G+ D +GS N ++AL
Sbjct: 239 SLSSDVLFEFNKATLKPAANQALDALFSQIVAANPKDGVATVIGYTDRIGSDNYNLALSE 298
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK---------NRRAIVFLK 154
+RA +V +Y V++G+ A +++V GK P G + +K +RR + L+
Sbjct: 299 KRAQSVASYLVSKGLYADKVRVEGRGKANPV-TGSSCASRSKQELIACLAPDRRVEIHLE 357
Query: 155 G 155
G
Sbjct: 358 G 358
>gi|296117473|ref|ZP_06836060.1| OmpA/MotB domain protein [Gluconacetobacter hansenii ATCC 23769]
gi|295975994|gb|EFG82785.1| OmpA/MotB domain protein [Gluconacetobacter hansenii ATCC 23769]
Length = 380
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 39/109 (35%), Gaps = 7/109 (6%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR------NSSIALGLR 104
+FFD ++ +++ + G+ D S + + L LR
Sbjct: 271 IFFDWDKSTLTERARAIVAVAAQASTSTQTTRIEVNGYTDTSASHPGPQGEHYNQELSLR 330
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA + V G+ + + +G+ P V A+NRR + L
Sbjct: 331 RAQTIKAELVRDGVPGPSIDIHGFGEANPLVPTGPNTREAQNRRVEIIL 379
>gi|226944962|ref|YP_002800035.1| periplasmic phosphate binding protein [Azotobacter vinelandii DJ]
gi|226719889|gb|ACO79060.1| periplasmic phosphate binding protein [Azotobacter vinelandii DJ]
Length = 428
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 49/137 (35%), Gaps = 5/137 (3%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+I+ + + + + + F S + ++ + + ++L +H
Sbjct: 293 AQKVQAVRIAPHADMPPAYQQLARHARRLSVNFRFQEGSALLDNKALRDVERVLAYLREH 352
Query: 80 ---DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ + G D S L RA AV ARG + R ++ G +P
Sbjct: 353 GKLENSLALVGFGDPKQDPERSTLLSKLRALAVRREL-ARGGATFR-EIIGLGDALPVAD 410
Query: 137 GHDEDAYAKNRRAIVFL 153
E+ KNRR V++
Sbjct: 411 NGSEEGRLKNRRVEVWV 427
>gi|298209291|ref|YP_003717470.1| OmpA family protein [Croceibacter atlanticus HTCC2559]
gi|83849218|gb|EAP87087.1| OmpA family protein [Croceibacter atlanticus HTCC2559]
Length = 665
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 57/145 (39%), Gaps = 12/145 (8%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVG-----DSVFFDTSSYSIRPADIQVL-SNLGS 74
++++ D +L + ++ + +G + ++FD ++IRP L +
Sbjct: 515 TTPTESQMVELDLMLEKEIVKAEVGDDIGKLLKLEPIYFDFDKHNIRPDAAVELAKVIAV 574
Query: 75 WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMP 133
E + + H D G + ++ L RR + NY V RG + R+ YG+
Sbjct: 575 MNEYPEMKIDVRSHTDSRGKDDYNMRLSERRNKSTINYIVERGGISRDRLTGRGYGESEL 634
Query: 134 SVYGHD-----EDAYAKNRRAIVFL 153
+ + + NRR+ +
Sbjct: 635 INECANGIPCSREKHELNRRSEFRI 659
>gi|320327051|gb|EFW83065.1| OmpA family protein [Pseudomonas syringae pv. glycinea str. race 4]
gi|330876989|gb|EGH11138.1| OmpA family protein [Pseudomonas syringae pv. glycinea str. race 4]
Length = 381
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 28/69 (40%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
LI GHAD G ++ + RA +V F G+ +R+ G MP
Sbjct: 215 VLILGHADTSGPTEANQKISQERAQSVAAIFRLSGLERNRLSQRGMGAVMPRAANDSLQG 274
Query: 143 YAKNRRAIV 151
A NRR +
Sbjct: 275 RALNRRVEI 283
>gi|313497490|gb|ADR58856.1| OmpA/MotB domain protein [Pseudomonas putida BIRD-1]
Length = 325
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 32/71 (45%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
L+ GHAD G+ ++ L L RA +V F G+ R+ + G MP +
Sbjct: 162 VLVLGHADSSGAAVANQKLSLERAASVSAIFRLSGLQRDRLTLKGMGSVMPRAANDSAEG 221
Query: 143 YAKNRRAIVFL 153
A NRR + L
Sbjct: 222 RALNRRVEMLL 232
>gi|289678953|ref|ZP_06499843.1| flagellar motor protein MotD [Pseudomonas syringae pv. syringae
FF5]
Length = 234
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 15/117 (12%), Positives = 38/117 (32%), Gaps = 4/117 (3%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ + + S+ F + ++ + +++ D +EG D+
Sbjct: 118 SDQMTVRGNELWIEIELNSSMLFGSGDAMPSDKAFTIIEKVAGIVKRFDNPIHVEGFTDD 177
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
++ L R+ ++ G++ +R+ YG+ P V A
Sbjct: 178 QPISTAQFPTNWELSSARSASIVRMLAMDGVNPARLASVGYGEFQPIVPNTSTAGRA 234
>gi|120435916|ref|YP_861602.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
gi|117578066|emb|CAL66535.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
Length = 281
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 55/145 (37%), Gaps = 7/145 (4%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
+++S + + + ++ S + +V D + F + SY + +L L
Sbjct: 117 LAVSYNLKQNISEGADEDDIDISVDETVVMINVSDKLLFGSGSYRVTGEAQPLLKKLAEV 176
Query: 76 LEKHDCD-FLIEGHADELGSR-----NSSIALGLRRAYAVFNYFVARGI-SASRMKVTSY 128
+ +IEGH D+ + L +RRA ++ + S++
Sbjct: 177 INSEPAMEVMIEGHTDDRTMVTESYLKDNWDLSVRRATSIVRVLQDKYNVEPSKLIAAGR 236
Query: 129 GKEMPSVYGHDEDAYAKNRRAIVFL 153
P V ++D AKNRR + +
Sbjct: 237 SSYQPLVENSNKDNMAKNRRTRIVI 261
>gi|156974662|ref|YP_001445569.1| hypothetical protein VIBHAR_02380 [Vibrio harveyi ATCC BAA-1116]
gi|156526256|gb|ABU71342.1| hypothetical protein VIBHAR_02380 [Vibrio harveyi ATCC BAA-1116]
Length = 204
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 68/189 (35%), Gaps = 31/189 (16%)
Query: 1 MQYSTIFIILSAITMMS-ISGIDNLD-TKISSPDTVLNESSLQEQFSSSVGD-------- 50
M+ + I + L + ++ D + T+ + + + + D
Sbjct: 1 MKATKILLALGVMLTTHHVTAEDKYEYTETPKAEQIADLQDDDNDGVINARDLCPGTPAT 60
Query: 51 --------------------SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHA 89
V F S I P + + L +L+ + ++G+A
Sbjct: 61 SEIDNDGCGEYIKSSEKMEVRVLFANDSDEIVPVFRRQIRELSEFLKGYPSTSIELQGYA 120
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
++G ++ L RRA V + GI + R+++ +G + G DE ++A NRR
Sbjct: 121 SKIGGAEHNLDLSKRRANNVRAALLGYGIESDRVRIVGFGDTHLAEQGTDEVSHALNRRV 180
Query: 150 IVFLKGCRA 158
+ G +
Sbjct: 181 TASVIGYKG 189
>gi|89891804|ref|ZP_01203306.1| putative flagellar motor protein MotB [Flavobacteria bacterium
BBFL7]
gi|89515959|gb|EAS18624.1| putative flagellar motor protein MotB [Flavobacteria bacterium
BBFL7]
Length = 287
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 49/139 (35%), Gaps = 7/139 (5%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-C 81
+S D LN S + ++ D + F SSY + ++L+ + +
Sbjct: 127 AKKMGSTSSDKDLNVSIEETVVMINIDDDLLFKDSSYRVSNDADEILAKIAEVVASEPSL 186
Query: 82 DFLIEGHADELG-----SRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSV 135
+ L+EGH D + L R+ A+ + ++ V P
Sbjct: 187 EILVEGHTDSRTVKQGSYIKDNWDLSTERSAAIVRRLEEKFGVAPEQLIVAGRASYDPIA 246
Query: 136 YGHDEDAYAKNRRAIVFLK 154
+D A+NRR + +
Sbjct: 247 ANDSKDNMARNRRTQIVIM 265
>gi|58422897|gb|AAW73248.1| OmpA [Citrobacter freundii]
Length = 222
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 47/104 (45%), Gaps = 5/104 (4%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L + S L + D ++ G D +GS + L
Sbjct: 112 TLKSDVLFNFNKATLKPEGQQALDQMYSQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSE 171
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK 145
+RA +V +Y +++GI + ++ G+ P + A A
Sbjct: 172 KRAQSVVDYLISKGIPSDKISARGMGESNPVTGNTCDNVKARAA 215
>gi|330889603|gb|EGH22264.1| OmpA family protein [Pseudomonas syringae pv. mori str. 301020]
Length = 381
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 28/69 (40%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
LI GHAD G ++ + RA +V F G+ +R+ G MP
Sbjct: 215 VLILGHADTSGPTEANQKISQERAQSVAAIFRLSGLERNRLSQRGMGAVMPRAANDSLQG 274
Query: 143 YAKNRRAIV 151
A NRR +
Sbjct: 275 RALNRRVEI 283
>gi|229496999|ref|ZP_04390704.1| immunogenic 75 kDa protein PG4 [Porphyromonas endodontalis ATCC
35406]
gi|229316101|gb|EEN82029.1| immunogenic 75 kDa protein PG4 [Porphyromonas endodontalis ATCC
35406]
Length = 691
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/174 (21%), Positives = 65/174 (37%), Gaps = 29/174 (16%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLN-ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQ 67
+L A + + ++ +++ D V + +L S V +F+ S + P
Sbjct: 492 VLLAGADKYLRAYSSFESDVATEDAVYAIDFTLASSVVSEVFQDIFYAFDSADLLPESKV 551
Query: 68 VLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT 126
L + L+ + + HAD +GS ++ L RRA AV +Y +GI A +++
Sbjct: 552 ALDQIAKILQDNPEVVVELSSHADRVGSDAYNLGLSDRRARAVVDYLKGKGIPADQLQPK 611
Query: 127 SYGKEMPSVYGH-----------------------DED----AYAKNRRAIVFL 153
YGK P V E+ A A NRR +
Sbjct: 612 GYGKSRPRVISSALHVLYPQFPEGTILDEAFVTALSEEDKKIADALNRRTEFIV 665
>gi|149909329|ref|ZP_01897985.1| sodium-driven polar flagellar protein MotB [Moritella sp. PE36]
gi|149807646|gb|EDM67594.1| sodium-driven polar flagellar protein MotB [Moritella sp. PE36]
Length = 290
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 44/132 (33%), Gaps = 7/132 (5%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ +L +Q + + F + S ++P V+ + L I GH +
Sbjct: 149 SGGVEVENLGQQIIIRINEKGSFPSGSAFLQPRFRPVIQKVAQLLATIPGIITIAGHTGK 208
Query: 92 LGSR----NSSIALGLRRAYAVF-NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S L +RA +V + + +R+ V P +E N
Sbjct: 209 EQLHSELYRSKWDLSSQRAVSVAHEMLKVKEFTENRLIVQGMADTQPLTDDENELRR--N 266
Query: 147 RRAIVFLKGCRA 158
RR + + +A
Sbjct: 267 RRVEISIMQGKA 278
>gi|310823157|ref|YP_003955515.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
gi|309396229|gb|ADO73688.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
Length = 171
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 59/170 (34%), Gaps = 16/170 (9%)
Query: 1 MQYSTIFIILSAITM----MSISGIDNLDTKISSPDTVLNESSLQEQF-SSSVGDSVFFD 55
M+ + + +S + + ++ S ++ E + + + + F
Sbjct: 1 MRLKALCMAVSLLAVPGMALAQSPVEQFKKAAGKASKSTLEKKINTKLTEDARKNQCSFK 60
Query: 56 TSSYSIRPADIQVLSNLG----------SWLEKHDCDFLIEGHADELGSRNSSIALGLRR 105
T + + Q L NL + F + GH D G + AL +R
Sbjct: 61 TGTDVLEAGCDQKLKNLTAALVEAKKQLDAGGVKNYQFEVSGHTDSSGDAAKNKALSEKR 120
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSV-YGHDEDAYAKNRRAIVFLK 154
A + V+RGI + + G E P V AKNRR + ++
Sbjct: 121 AAVIVKELVSRGIPRAEILAVGRGSEQPLVKPDDTAAKKAKNRRYEIQVR 170
>gi|255019464|ref|ZP_05291566.1| OmpA/MotB [Acidithiobacillus caldus ATCC 51756]
gi|254971096|gb|EET28556.1| OmpA/MotB [Acidithiobacillus caldus ATCC 51756]
Length = 93
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 29/75 (38%)
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ D + G+ ++G+ ++ L RA +V Y G+ RM + + P
Sbjct: 7 QHPDAVLDVNGYCSKVGTYAYNLKLSKLRAESVAQYLERHGVPRDRMVLKGHSYNDPVAS 66
Query: 137 GHDEDAYAKNRRAIV 151
+ N+R +
Sbjct: 67 NATPEGRFLNQRVEI 81
>gi|89071216|ref|ZP_01158402.1| OmpA family protein [Oceanicola granulosus HTCC2516]
gi|89043258|gb|EAR49486.1| OmpA family protein [Oceanicola granulosus HTCC2516]
Length = 107
Score = 56.0 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 41/102 (40%), Gaps = 1/102 (0%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSS 98
+ ++ + FDT S ++ + L+ L + GH D G + +
Sbjct: 6 TGDSLVVTLPQDILFDTDSATLSGSLQSDLNALARSLNNYPSTTITVIGHTDNTGEASYN 65
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
L RRA AV + ++ G+SA R+ G++ P E
Sbjct: 66 QNLSRRRAQAVTSTLISSGVSAGRINTVGRGEDAPIATNLTE 107
>gi|208780408|ref|ZP_03247749.1| OmpA family protein [Francisella novicida FTG]
gi|208743776|gb|EDZ90079.1| OmpA family protein [Francisella novicida FTG]
Length = 408
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/172 (18%), Positives = 61/172 (35%), Gaps = 28/172 (16%)
Query: 11 SAITMMSISGIDNLDTKISSPDT---VLNESSLQEQFSSS--------------VGDSVF 53
A + ++S LD K E E S+ + ++
Sbjct: 1 MASLLTTLSACQTLDDKDKDSGPLTFPTLEPCTAELLQSNQSFICVKEQTGPDLIETNIK 60
Query: 54 FDTSSYSIRPADIQVLSNLGSW----------LEKHDCDFLIEGHADELGSRNSSIALGL 103
FD SY++ +VL L ++ ++ + + D+ + +I L
Sbjct: 61 FDADSYTLNTQAKEVLDKLFAYLKLTDTTNFTIKGYAGKVESKILTDQKILTDYNIRLSK 120
Query: 104 RRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RA +V Y V +G S+ + + + G + P + A N+R + LK
Sbjct: 121 NRASSVEEYLVNKGLGSSDGITIKALGYQDPIAPNDSTSSRAINQRVEITLK 172
>gi|323497326|ref|ZP_08102344.1| putative outer membrane protein [Vibrio sinaloensis DSM 21326]
gi|323317409|gb|EGA70402.1| putative outer membrane protein [Vibrio sinaloensis DSM 21326]
Length = 203
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/189 (15%), Positives = 78/189 (41%), Gaps = 31/189 (16%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDS--------- 51
M+ + + ++ +A+ + S ++ I +P + L E +
Sbjct: 1 MKKTALSLLTTAVLLTGCSIAEDDYAYIDTPVPNQVDDLLDEDKDGVINARDLCPQTPSR 60
Query: 52 ---------------------VFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHA 89
+ F S ++P + + + ++ + ++G+A
Sbjct: 61 SEIDNDGCGTFINTSEEISLHILFANDSAEVQPVFMTQIREVADFMAEFPSTSVELQGYA 120
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
++G + ++ L +RA+AV + ++ G+ +SR+ + +G S+ G+DE +A+NR+
Sbjct: 121 SKVGRADYNLELSKQRAFAVEDLLLSYGVDSSRVNIVGFGDTNLSLEGNDEQVHAQNRKV 180
Query: 150 IVFLKGCRA 158
+ + G +
Sbjct: 181 VASIIGHKG 189
>gi|258624773|ref|ZP_05719704.1| outer membrane protein [Vibrio mimicus VM603]
gi|258582935|gb|EEW07753.1| outer membrane protein [Vibrio mimicus VM603]
Length = 173
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
+ + + Y + ++L S ++ ++EGHAD+ G+ + AL RRA AV
Sbjct: 70 LHYPFNKYQLSGPHQEILQTYVSMVDSQY-KIVVEGHADQTGNPKYNQALSERRAGAVTR 128
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
Y +R+ +G+ P + NRR ++ ++
Sbjct: 129 YLRDTLKLGNRIVEKGFGESTPVCTVQENAQTGCNRRVVLTIQ 171
>gi|258543922|ref|ZP_05704156.1| lipoprotein PlpD [Cardiobacterium hominis ATCC 15826]
gi|258520861|gb|EEV89720.1| lipoprotein PlpD [Cardiobacterium hominis ATCC 15826]
Length = 256
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 9/116 (7%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH--DCDFLIEGHADELGSRNSSIALGLRR 105
+ F + ++RP + L++L + + H + ++G D LGS + L R
Sbjct: 137 LAADALFAFDTATLRPEADRALADLLAKVRAHGDTGEVRVDGFTDRLGSATYNRELSQAR 196
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE-------DAYAKNRRAIVFLK 154
A AV NY V GI+ASR++ G P + D +RR V +
Sbjct: 197 ADAVKNYLVRGGIAASRIRAAGLGSSQPLAHCADSLPRGELIACLQPDRRVEVTVS 252
>gi|254441098|ref|ZP_05054591.1| OmpA family protein [Octadecabacter antarcticus 307]
gi|198251176|gb|EDY75491.1| OmpA family protein [Octadecabacter antarcticus 307]
Length = 226
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 4/138 (2%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
G ++ ++ +FS+ V + F +S ++ + L +W+ +
Sbjct: 49 GYATINNSEVQSGQGSLTVNMNRRFSNEVSAMITFPFNSTALDASARATLRQQANWIRQF 108
Query: 80 D-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT-SYGKEMPSVYG 137
F + GH D +GS + LGLRRA AV Y ++GIS SR++ ++G+ P +
Sbjct: 109 PEVRFKVFGHTDLVGSSAYNRRLGLRRAEAVVLYLSSQGISRSRLEAVVTFGETQPLIV- 167
Query: 138 HDEDAYAKNRRAIVFLKG 155
E +NRR + + G
Sbjct: 168 -TEGRERRNRRTVTEVSG 184
>gi|26990523|ref|NP_745948.1| OmpA/MotB domain protein [Pseudomonas putida KT2440]
gi|24985500|gb|AAN69412.1|AE016577_7 periplamic phosphate-binding protein [Pseudomonas putida KT2440]
Length = 435
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 47/130 (36%), Gaps = 5/130 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH---DCDF 83
++ + + + + + F S S+ ++ + + +L +
Sbjct: 307 SVAPQSDMPPPYRTLARQAQRLSVNFRFQEGSASLDNKALRDVQRVTEYLRQAGKLQGKA 366
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
++ G D + + L RA AV G+ ++VT G E+P E
Sbjct: 367 VLVGFGDPKETPGRAALLSRLRAQAVRRELARGGVEV--LQVTGMGDELPVAGNELEQGR 424
Query: 144 AKNRRAIVFL 153
+NRR V++
Sbjct: 425 LRNRRVEVWV 434
>gi|163750646|ref|ZP_02157883.1| OmpA family protein [Shewanella benthica KT99]
gi|161329641|gb|EDQ00632.1| OmpA family protein [Shewanella benthica KT99]
Length = 388
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+ F +S ++ + L +++ +K + LI GHA ++G + ++AL +RA AV
Sbjct: 275 IQFANNSSVVKTESFAHIEKLATYMNKKPESTVLISGHASDVGKADYNMALSDKRAKAVA 334
Query: 111 NYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
V + + R++ +G + G+ +A NRR + G +
Sbjct: 335 KILVEKYGISQDRVEAKGFGITQAVIQGNSAEANKANRRIEAHVTGVK 382
>gi|71733989|ref|YP_273664.1| OmpA family protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|71554542|gb|AAZ33753.1| OmpA family protein [Pseudomonas syringae pv. phaseolicola 1448A]
Length = 418
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 28/69 (40%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
LI GHAD G ++ + RA +V F G+ +R+ G MP
Sbjct: 252 VLILGHADTSGPTEANQKISQERAQSVAAIFRLSGLERNRLSQRGMGAVMPRAANDSLQG 311
Query: 143 YAKNRRAIV 151
A NRR +
Sbjct: 312 RALNRRVEI 320
>gi|197103803|ref|YP_002129180.1| OmpA family protein [Phenylobacterium zucineum HLK1]
gi|196477223|gb|ACG76751.1| OmpA family protein [Phenylobacterium zucineum HLK1]
Length = 410
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEK-HDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
V+F Y + P QV++ ++ + + ++ GHAD GS+ ++ L RRA AV
Sbjct: 305 IVYFPFDQYVLTPEAQQVVTEAANYAKGGNATRVVVVGHADTSGSQAYNVRLSERRAKAV 364
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ V G++ + + V G+ MP+V D NRR+ + +
Sbjct: 365 ADALVGSGVNQTSLSVDWKGETMPAVATGDGVKEPLNRRSTIDI 408
>gi|163786268|ref|ZP_02180716.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Flavobacteriales bacterium ALC-1]
gi|159878128|gb|EDP72184.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Flavobacteriales bacterium ALC-1]
Length = 684
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 48/110 (43%), Gaps = 6/110 (5%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYA 108
+ ++FD + IR ++L L +E++ I H D G+ + L +RA +
Sbjct: 572 EPIYFDFEMWDIREDSKKILDQLVKKMERYPDIHLKISSHTDSRGTVRYNQILSEKRAES 631
Query: 109 VFNYFV-ARGISASRMKVTSYGKEMPSVY----GHDEDAYAKNRRAIVFL 153
NY I+A R++ +G+ P V ++ + NRR+ +
Sbjct: 632 TRNYIALIGYINARRLQFKGFGELSPIVECPMLNCTDEEHQLNRRSEFEI 681
>gi|37704650|gb|AAR01597.1| OprF [Pseudomonas sp. MFY138]
Length = 314
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 48/119 (40%), Gaps = 4/119 (3%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-E 77
DN+D +P V ++ + V V FD ++P + NL ++ +
Sbjct: 196 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMTQ 255
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSV 135
+EGH D +G + L RRA AV + + +SR++ YG+ P
Sbjct: 256 YPSTTTTVEGHTDSVGPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSVGYGESRPVA 314
>gi|114332455|ref|YP_748677.1| OmpA/MotB domain-containing protein [Nitrosomonas eutropha C91]
gi|114309469|gb|ABI60712.1| OmpA/MotB domain protein [Nitrosomonas eutropha C91]
Length = 231
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 10/122 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
S FD ++PA +Q L + LE + D +I G+ D +GS + L +R
Sbjct: 106 VSFSADALFDFDKAVLKPAGMQALDDFSRNLEGVNYDLIIAVGYTDRIGSEAYNKKLSVR 165
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPS---------VYGHDEDAYAKNRRAIVFLKG 155
RA AV NY V++GI A R+ GK P + A +RR + + G
Sbjct: 166 RAEAVKNYLVSKGIGADRIFTDGKGKANPVTGDSCQGTKATRTLINCLAPDRRVEIEVAG 225
Query: 156 CR 157
R
Sbjct: 226 TR 227
>gi|86739073|ref|YP_479473.1| OmpA/MotB [Frankia sp. CcI3]
gi|86565935|gb|ABD09744.1| OmpA/MotB [Frankia sp. CcI3]
Length = 187
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/164 (19%), Positives = 63/164 (38%), Gaps = 21/164 (12%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTVLNE-----------------SSLQEQFSSSVGD 50
++ +A+ +++ DT +P + ++V
Sbjct: 28 VMTAALGLVAGCSSSGGDTASFTPAPRATRIAPAVAADPLPPLSKFITQPDGSQVTTVSA 87
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
FD++S +R + L + + +H + G++D LG ++ L RA AV
Sbjct: 88 DYLFDSNSSELRREAVTALGQILPSIREHPGHIAVIGYSDGLGRTEDNLRLSQDRAKAVE 147
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
++ +GI S ++V G+E D A A RR + L+
Sbjct: 148 SWLATQGIPGSVLEVEGKGEE----GAQDGVADASRRRVEIVLR 187
>gi|38146952|gb|AAR11861.1| peptidoglycan-associated lipoprotein [Ehrlichia canis]
Length = 147
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/155 (22%), Positives = 65/155 (41%), Gaps = 16/155 (10%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M++ +FI + + +S D + + + ++FD +
Sbjct: 1 MKHKLVFIKF-ILLCLILSSCKTTDHVPLVNTDHVFSN-------MKTIEKIYFDFGKAT 52
Query: 61 IRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
I +D +L + + + + +I GH D G+ ++ LG +RA AV ++ + S
Sbjct: 53 IGDSDKAILEKVIQKAQKDTNTNIVIVGHTDTRGTDEYNLELGEQRANAVKDFIIEHDKS 112
Query: 120 -ASRMKVTSYGKEMPSV------YGHDEDAYAKNR 147
+R+ V S GK P+V E A+AKNR
Sbjct: 113 LENRITVQSKGKSEPAVLVYSSNPEEAEHAHAKNR 147
>gi|330957696|gb|EGH57956.1| ompA family protein [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 388
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 30/69 (43%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
LI GHAD G +++ + RA +V F G+ +R+ + G MP
Sbjct: 215 VLILGHADTSGPTDANQKISQERAQSVAAIFRLSGLERNRLSLRGMGAVMPRAANDSLQG 274
Query: 143 YAKNRRAIV 151
A NRR +
Sbjct: 275 RALNRRVEI 283
>gi|325287507|ref|YP_004263297.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
gi|324322961|gb|ADY30426.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
Length = 393
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 52/135 (38%), Gaps = 8/135 (5%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGD--SVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDF 83
+ E +E + + S+ F +S + + L+++ E
Sbjct: 256 AEVEKEKAAAEKQRREDLQAKINSFGSINFALNSSYLDSRTKKTLNSIAELLQENPTVTV 315
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH----- 138
+ + D G+ ++ L RR ++ V++G+S+ ++ T++G+E
Sbjct: 316 KLGAYTDSRGTDKYNLWLSQRRMQRSLDFLVSKGVSSEKVNATAFGEEELLNNCEDGVYC 375
Query: 139 DEDAYAKNRRAIVFL 153
E + NRR + +
Sbjct: 376 TEQEHKINRRIEITV 390
>gi|37704606|gb|AAR01575.1| OprF [Pseudomonas sp. MFY33]
Length = 316
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 49/119 (41%), Gaps = 4/119 (3%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD ++ + NL ++++
Sbjct: 198 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKENSYGDIKNLADFMKQ 257
Query: 79 HDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSV 135
+ +EGH D +G + L RRA AV + + ++R++ YG+ P
Sbjct: 258 YPSTSTTVEGHTDSVGPDAYNQKLSERRANAVKQVLTNQYGVESTRVQSVGYGESRPVA 316
>gi|269123640|ref|YP_003306217.1| OmpA/MotB domain-containing protein [Streptobacillus moniliformis
DSM 12112]
gi|268314966|gb|ACZ01340.1| OmpA/MotB domain protein [Streptobacillus moniliformis DSM 12112]
Length = 314
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 42/102 (41%), Gaps = 2/102 (1%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
+ +S Q+ + + ++ G+ D G+ ++ LGL RA +V Y
Sbjct: 215 IYGFNSNKFILNKKQIDVIDALVPNLQNREIIVIGYTDTDGNDKYNLELGLNRANSVKVY 274
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+GI ++++ + + + + + NRR + +K
Sbjct: 275 LENKGIKVNQIRTVGFNE--LITNNNTLENKSLNRRVELIVK 314
>gi|37704660|gb|AAR01602.1| OprF [Pseudomonas sp. MFY160]
Length = 316
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 49/119 (41%), Gaps = 4/119 (3%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD ++ + NL ++++
Sbjct: 198 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKTNSYGDIKNLADFMKQ 257
Query: 79 HDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSV 135
+ +EGH D +G + L RRA AV + + ++R++ YG+ P
Sbjct: 258 YPSTTTTVEGHTDSVGPDAYNQKLSERRANAVKQVLTNQYGVESARVQSVGYGESRPVA 316
>gi|261492650|ref|ZP_05989203.1| lipoprotein Plp4 [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|261494601|ref|ZP_05991082.1| lipoprotein Plp4 [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261309713|gb|EEY10935.1| lipoprotein Plp4 [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261311809|gb|EEY12959.1| lipoprotein Plp4 [Mannheimia haemolytica serotype A2 str. BOVINE]
Length = 268
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 44/112 (39%), Gaps = 8/112 (7%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRR 105
++ FD ++ +V+ N+ L+ + G+ D LGS ++ L RR
Sbjct: 124 TLTGDFLFDFDKATLTTKGKEVVDNVAQQLKASKAQQVKVAGYTDRLGSAAYNLDLSQRR 183
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK------NRRAIV 151
+ V V +G++A +++ YGK E NRR +
Sbjct: 184 SNTVKARLVQQGVTA-QIEAVGYGKANQVKACDGETGQELKDCLRPNRRVEI 234
>gi|330830631|ref|YP_004393583.1| major outer membrane protein ompAII [Aeromonas veronii B565]
gi|328805767|gb|AEB50966.1| Major outer membrane protein ompAII [Aeromonas veronii B565]
Length = 333
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 50/123 (40%), Gaps = 12/123 (9%)
Query: 47 SVGDSVFFDTSSYSIRPA---DIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F +++P + L ++ D ++ G+ D +GS ++ L
Sbjct: 207 ALSSDVLFAFGKSTLKPEGVAALNTLYQQIVDVQPKDGSAVVVGYTDRIGSDAYNLKLSE 266
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RA V ++ V +G+ A ++ + G+ P + A+ +RR V +
Sbjct: 267 ARARTVADFLVGKGLPAGKVAIEGRGEANPVTGTQCNSVKGKAQLISCLAPDRRVEVRVT 326
Query: 155 GCR 157
G +
Sbjct: 327 GVQ 329
>gi|325285434|ref|YP_004261224.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
gi|324320888|gb|ADY28353.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
Length = 645
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 47/109 (43%), Gaps = 6/109 (5%)
Query: 51 SVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
+++FD + + IRP + + + + + H D G + ++ L +RA A
Sbjct: 535 TIYFDLNKFDIRPDAEIEIQKVIVAMEKFPSLKIKVNSHTDSRGKDSYNLWLSQKRAEAT 594
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGH-----DEDAYAKNRRAIVFL 153
NY +++GI ASR++ +G+ + NRR+ +
Sbjct: 595 VNYMISKGIDASRLQGEGFGETKLVNKCENGVPCTVKEHQLNRRSEFII 643
>gi|281421188|ref|ZP_06252187.1| OmpA family protein [Prevotella copri DSM 18205]
gi|281404723|gb|EFB35403.1| OmpA family protein [Prevotella copri DSM 18205]
Length = 660
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 46/137 (33%), Gaps = 28/137 (20%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGL 103
+ + D++F+D ++ A L L + E + H D G+ + L
Sbjct: 516 APVLIDNIFYDFDKATLTEASTTALDQLVTLLKENPHVTIELSAHCDYKGNSEYNKHLSQ 575
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMP-------------SVYGH--DED------- 141
RRA +V +Y + GI R+ YGKE P G E+
Sbjct: 576 RRAQSVVDYLIKHGIEKERLTPVGYGKEKPKNVRKKLTEKYPWLKEGDVLSEEFILKQSK 635
Query: 142 -----AYAKNRRAIVFL 153
NRR +
Sbjct: 636 EHQAICNQLNRRTEFKV 652
>gi|296136329|ref|YP_003643571.1| OmpA/MotB domain protein [Thiomonas intermedia K12]
gi|294340565|emb|CAZ88950.1| putative OmpA/MotB precursor [Thiomonas sp. 3As]
gi|295796451|gb|ADG31241.1| OmpA/MotB domain protein [Thiomonas intermedia K12]
Length = 230
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 53/124 (42%), Gaps = 9/124 (7%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FF + + PA + L +L ++ + + +I G+ D GS + L +R
Sbjct: 106 VTYNADAFFQFNKAVLLPAGKEKLDDLAGKIKAINLEVVIATGYTDSFGSVAYNQKLSVR 165
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD--------EDAYAKNRRAIVFLKGC 156
RA AV Y V++G+ A ++ V GK V + A NRR +V + G
Sbjct: 166 RAEAVKAYLVSQGVPADKIYVEGKGKTDFRVDPKSCKGSFKSQVECQAPNRRTVVEVVGT 225
Query: 157 RANT 160
T
Sbjct: 226 HMVT 229
>gi|330971005|gb|EGH71071.1| OmpA/MotB [Pseudomonas syringae pv. aceris str. M302273PT]
Length = 317
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 28/69 (40%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
LI GHAD G ++ + RA +V F G+ +R+ G MP
Sbjct: 214 VLILGHADTSGPIEANQKISQERAQSVAAIFRLSGLERNRLSQRGMGAVMPRAANDSLQG 273
Query: 143 YAKNRRAIV 151
A NRR +
Sbjct: 274 RALNRRVEI 282
>gi|21328690|gb|AAM48696.1| OmpA family protein [uncultured marine proteobacterium]
Length = 488
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 37/97 (38%), Gaps = 3/97 (3%)
Query: 61 IRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY---FVARG 117
+++Q L L D + G +D GS ++ + L RA AV +
Sbjct: 392 DSQSNLQFLKRLFVAGYFEGRDVMFVGFSDSQGSAEGNVQISLDRARAVRATIATLLDDS 451
Query: 118 ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ +V G+ +P +NRR +++K
Sbjct: 452 QLSDGFEVLGLGEGLPLACNDTAWGQNQNRRVEIWVK 488
>gi|167619124|ref|ZP_02387755.1| OmpA family protein [Burkholderia thailandensis Bt4]
gi|257138357|ref|ZP_05586619.1| OmpA family protein [Burkholderia thailandensis E264]
Length = 209
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 9/121 (7%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FD ++PA Q L L + ++ + + ++ G+ D +GS + L LR
Sbjct: 79 ITYQADTLFDFDKAILKPAGKQKLDELAAKIQGMNVEVVVATGYTDRIGSDKYNDRLSLR 138
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE--------DAYAKNRRAIVFLKGC 156
RA AV +Y V++G+ A+++ GK P + A +RR V + G
Sbjct: 139 RAQAVKSYLVSKGVPANKVYTEGKGKRNPITGNTCKQKNRKQLIACLAPDRRVEVEVVGT 198
Query: 157 R 157
+
Sbjct: 199 Q 199
>gi|157962338|ref|YP_001502372.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC
700345]
gi|157847338|gb|ABV87837.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345]
Length = 249
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 62/145 (42%), Gaps = 1/145 (0%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
S+ + + + T L + Q+ ++G +V F T S I P Q L+++
Sbjct: 97 TSLVELSDQYEQAQQQLTTLKMAQEQKLTELALGLNVQFKTGSSVIEPHFQQQLNDIAYA 156
Query: 76 LE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
+ + + G+AD G + + AL +R V NY +G+ R+ ++G P
Sbjct: 157 MSLSPELTLDLTGYADRRGDSDYNQALSEQRVAEVKNYLTEQGVEEERLHNQAFGDSSPL 216
Query: 135 VYGHDEDAYAKNRRAIVFLKGCRAN 159
+ + + +RR + L+ ++
Sbjct: 217 MAEQNFENDFFDRRVTLKLQNQNSS 241
>gi|291334148|gb|ADD93818.1| outer membrane protein [uncultured marine bacterium
MedDCM-OCT-S05-C362]
Length = 269
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 1/117 (0%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNS 97
++ ++ + +++D S I P D LS +G + GHAD G+
Sbjct: 150 TITDEAEAERKIVIYYDHDSSDISPEDQAYLSAEVGRIPMHDKVSLTVVGHADRTGTERY 209
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ L + RA V GI + V++ G+ +P++ D + +NRR+ V +K
Sbjct: 210 NHDLSVERAIGVHRALSQYGIGDRSIGVSAKGETVPAIPTSDGQSEPRNRRSEVLIK 266
>gi|37704600|gb|AAR01572.1| OprF [Pseudomonas sp. MFY30]
gi|37704670|gb|AAR01607.1| OprF [Pseudomonas sp. MFY234]
Length = 314
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 48/119 (40%), Gaps = 4/119 (3%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-E 77
DN+D +P V ++ + V V FD ++P + NL ++ +
Sbjct: 196 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMTQ 255
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSV 135
+EGH D +G + L RRA AV + + +SR++ YG+ P
Sbjct: 256 YPSTTTTVEGHTDSVGPDAYNQKLSERRANAVKQVLTNQYGVESSRVQSVGYGESRPVA 314
>gi|325275254|ref|ZP_08141211.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51]
gi|324099595|gb|EGB97484.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51]
Length = 323
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 32/71 (45%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
L+ GHAD G+ ++ L L RA +V F G+ R+ + G MP +
Sbjct: 162 VLVLGHADTSGAAAANQKLSLERAASVSAIFRLSGLQRDRLTLKGMGSVMPRAANDSPEG 221
Query: 143 YAKNRRAIVFL 153
A NRR + L
Sbjct: 222 RALNRRVEMLL 232
>gi|224534343|ref|ZP_03674921.1| flagellar motor apparatus [Borrelia spielmanii A14S]
gi|224514445|gb|EEF84761.1| flagellar motor apparatus [Borrelia spielmanii A14S]
Length = 260
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 46/128 (35%), Gaps = 15/128 (11%)
Query: 41 QEQFSSSVGDSVFFDTSSY----SIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRN 96
+ S+ FFD++S IQ +++ L +F IEGH D + +
Sbjct: 119 ERGIVISLAADAFFDSASADVKLEDNRDSIQKIASFIGVLSSRGYNFKIEGHTDNIDTDV 178
Query: 97 SSIALGLR---------RAYAVFNYFVARGISA--SRMKVTSYGKEMPSVYGHDEDAYAK 145
+ + NY +++ ++ +V+ +G P + A
Sbjct: 179 NGPWKSNWELSVARSVNMLEHILNYLDQSNVTSVENKFEVSGFGGSRPIATDDTPEGRAY 238
Query: 146 NRRAIVFL 153
NRR + +
Sbjct: 239 NRRIDILI 246
>gi|117619103|ref|YP_858241.1| outer membrane protein A [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117560510|gb|ABK37458.1| outer membrane protein P5 [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 352
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 11/124 (8%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSI 99
++ V FD + +++PA Q L NL S +E+ + G+ D +GS +
Sbjct: 223 DKQFTLSSDVLFDFNKATLKPAAGQALDNLYSQIEQARPKDGVATVIGYTDRIGSDAYNQ 282
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDED------AYAKNRRAIV 151
L +RA V +Y V +G+ A ++ V GK P + A +RR V
Sbjct: 283 KLSEQRARTVADYLVGKGLPAGKVNVEGRGKGNPVTGDSCTSKSKKELIVCLAPDRRVEV 342
Query: 152 FLKG 155
++G
Sbjct: 343 KVEG 346
>gi|332663673|ref|YP_004446461.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332332487|gb|AEE49588.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 846
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 52/158 (32%), Gaps = 30/158 (18%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IE 86
+ E + D++ + + I P L+ + ++K+ + +
Sbjct: 523 PETKVKEEPEYDTITTEQPILLDNIVYGYNDDKITPESEPDLNLVLDLMKKYPEMVIELS 582
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP------------- 133
H D G + L RRA + + + +GI++SR++ YG+ P
Sbjct: 583 SHTDYRGRDEYNQDLSQRRAESARKWLLQKGIASSRIQAKGYGEAQPKPVNEKMASEFLF 642
Query: 134 SVYGHD---------------EDAYAKNRRAIV-FLKG 155
E A+ NRR +KG
Sbjct: 643 MTPKDTLTQDFIDNLATKEEQEAAHQLNRRTEFKIIKG 680
>gi|330896311|gb|EGH28406.1| OmpA/MotB [Pseudomonas syringae pv. japonica str. M301072PT]
Length = 384
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 28/69 (40%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
LI GHAD G ++ + RA +V F G+ +R+ G MP
Sbjct: 214 VLILGHADTSGPTEANQKISQERAQSVAAIFRLSGLERNRLSQRGMGAVMPRAANDSLQG 273
Query: 143 YAKNRRAIV 151
A NRR +
Sbjct: 274 RALNRRVEI 282
>gi|183219680|ref|YP_001837676.1| hypothetical protein LEPBI_I0255 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189909816|ref|YP_001961371.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167774492|gb|ABZ92793.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167778102|gb|ABZ96400.1| Hypothetical protein LEPBI_I0255 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 348
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 47/126 (37%), Gaps = 2/126 (1%)
Query: 30 SPDTVLNESSLQEQFSSSVGD-SVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEG 87
V ++ Q + + D + F S + ++ L L+ + ++G
Sbjct: 217 QTGNVSSQFDSQSKAIRYINDLQIRFIKQSMATEDGAADKIATLAEALKTYPSIKVRVKG 276
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
H +G + + L RA +++ + G++ S++ +G+ E KNR
Sbjct: 277 HTCFIGEMDENKILSDERAKFIYDELIKNGVNQSQLDYRGFGETAEIDTNQTESGRIKNR 336
Query: 148 RAIVFL 153
R +
Sbjct: 337 RVDFTV 342
>gi|37704618|gb|AAR01581.1| OprF [Pseudomonas sp. MFY65]
Length = 317
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 51/119 (42%), Gaps = 4/119 (3%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD ++P + NL ++++
Sbjct: 199 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQ 258
Query: 79 H-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSV 135
+ ++EGH D +G + L RRA AV + + + ++R+ YG+ P
Sbjct: 259 YPQTTTVVEGHTDSVGPDAYNQKLSERRANAVKDVLTQQYGVESTRVDSVGYGETRPVA 317
>gi|89075158|ref|ZP_01161594.1| putative outer membrane protein [Photobacterium sp. SKA34]
gi|89049112|gb|EAR54678.1| putative outer membrane protein [Photobacterium sp. SKA34]
Length = 196
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 61/142 (42%), Gaps = 4/142 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDS---VFFDTSSYSIRPADIQVLSNLGSW-LE 77
+ D +P + ++ F + ++ V F S I + ++ +SN+ + +
Sbjct: 42 NQRDRCADTPIDAVVDNDGCPTFVKNSEENNIHVLFANDSSEIPESYMENISNMSEFLTK 101
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
++G+A +G+ ++ L RRA + + GI SR+K +G P
Sbjct: 102 YPKTHIELKGYASPVGNTAYNVELSKRRAAVIRQALITEGIVPSRIKTIGFGDSDPVKAS 161
Query: 138 HDEDAYAKNRRAIVFLKGCRAN 159
E++ A +RR + + G + N
Sbjct: 162 DVEESNALSRRVVAQVVGSQGN 183
>gi|224458593|gb|ACN43175.1| major outer membrane protein OmpAI [Aeromonas veronii]
Length = 327
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 49/121 (40%), Gaps = 12/121 (9%)
Query: 47 SVGDSVFFDTSSYSIRPA---DIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F +++P + L ++ D ++ G+ D +GS ++ L
Sbjct: 206 ALSSDVLFAFGKSTLKPEGVAALNTLYQQVVDVQPKDGSAVVVGYTDRIGSDAYNLKLSE 265
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLK 154
RA V ++ V +G+ A ++ + G+ P + A+ +RR V +
Sbjct: 266 ARARTVADFLVGKGLPAGKVAIEGRGEANPVTGTQCNSVKGKAQLISCLAPDRRVEVRVT 325
Query: 155 G 155
G
Sbjct: 326 G 326
>gi|37704612|gb|AAR01578.1| OprF [Pseudomonas sp. MFY59]
gi|37704620|gb|AAR01582.1| OprF [Pseudomonas sp. MFY68]
gi|37704662|gb|AAR01603.1| OprF [Pseudomonas sp. MFY161]
Length = 318
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 49/119 (41%), Gaps = 4/119 (3%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD ++P + NL ++++
Sbjct: 200 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQ 259
Query: 79 H-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSV 135
+ +EGH D +G + L RRA AV + I +SR+ YG+ P
Sbjct: 260 YPQTTTTVEGHTDSVGPDAYNQKLSERRANAVKQVLTQQYGIESSRVDSVGYGETRPVA 318
>gi|257464737|ref|ZP_05629108.1| lipoprotein Plp4 [Actinobacillus minor 202]
gi|257450397|gb|EEV24440.1| lipoprotein Plp4 [Actinobacillus minor 202]
Length = 282
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 8/112 (7%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRR 105
S+ FD ++ +V+ N+ + L+ + G+ D LGS N ++ L RR
Sbjct: 138 SLSGDFLFDFDKDTLTTKGKEVVDNVAAQLKSSKAQQVKVAGYTDRLGSVNYNLDLSQRR 197
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK------NRRAIV 151
A V V +G++A +++ YGK E A NRR V
Sbjct: 198 ANMVKARLVQQGVTA-QIEAVGYGKANQVKACDGESGQALRDCLRPNRRVEV 248
>gi|167563638|ref|ZP_02356554.1| ompA family protein [Burkholderia oklahomensis EO147]
Length = 209
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 54/121 (44%), Gaps = 9/121 (7%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+ FD ++PA Q L L + ++ + + ++ G+ D +GS + L LR
Sbjct: 79 ITYQADTLFDFDKAILKPAGKQKLDELAAKIQGMNVEVVVATGYTDRIGSDKYNDRLSLR 138
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE--------DAYAKNRRAIVFLKGC 156
RA AV +Y V++G+ A+++ GK P + A +RR V + G
Sbjct: 139 RAQAVKSYLVSKGVPANKVYTEGKGKRNPVTGNTCKQKNRKQLIACLAPDRRVEVEVVGT 198
Query: 157 R 157
+
Sbjct: 199 Q 199
>gi|145298279|ref|YP_001141120.1| outer membrane protein [Aeromonas salmonicida subsp. salmonicida
A449]
gi|142851051|gb|ABO89372.1| outer membrane protein [Aeromonas salmonicida subsp. salmonicida
A449]
Length = 352
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 54/128 (42%), Gaps = 12/128 (9%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSI 99
+ ++ V F ++P +Q L L + + D L+ G+ D +GS +++
Sbjct: 214 DQTFNLSSDVLFAFGKAELKPEGMQALDALYQQIVDVQPKDGSALVMGYTDRIGSDINNL 273
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK---------NRRAI 150
AL RA V N+ + +G+ A ++ + G+ P + AK +RR
Sbjct: 274 ALSEARASTVANFLIGKGLPADKVSIQGNGESNPVTGSQCDAIKAKAALIDCLGPDRRVE 333
Query: 151 VFLKGCRA 158
V + G +
Sbjct: 334 VRVTGVQG 341
>gi|114799688|ref|YP_760523.1| OmpA family protein [Hyphomonas neptunium ATCC 15444]
gi|114739862|gb|ABI77987.1| OmpA family protein [Hyphomonas neptunium ATCC 15444]
Length = 378
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 38/109 (34%)
Query: 34 VLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG 93
S +E + F S + A VL +EGH D+ G
Sbjct: 254 QAVASCEEELSRLLEAARIEFAPGSVILNVASGPVLDLAARAASDCPGTLRVEGHTDDTG 313
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
+ + L LRRA AV + RG+ R+ YG+ P ED
Sbjct: 314 NPGYNDQLSLRRAEAVRAAMIERGVPPDRLVAAGYGQNNPVSSNETEDG 362
>gi|329755866|gb|AEC04330.1| outer membrane protein A [Pasteurella multocida]
Length = 359
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 49/121 (40%), Gaps = 10/121 (8%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLG-SWLEKHDCDFLIEGHADELGSRNSSIALGLRR 105
++ V F ++PA VL + + + G+ D LGS ++ L RR
Sbjct: 239 TLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSASVAVAGYTDRLGSDAYNLKLSQRR 298
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLKGC 156
A V NY VA+G++ + + T +G+ P A +R + +KG
Sbjct: 299 ADTVANYLVAKGVAQNAISATGHGEANPVTGNKCDSVKGRKALIACLADDRPVEIAVKGN 358
Query: 157 R 157
+
Sbjct: 359 K 359
>gi|329755840|gb|AEC04317.1| outer membrane protein A [Pasteurella multocida]
gi|329755846|gb|AEC04320.1| outer membrane protein A [Pasteurella multocida]
gi|329755854|gb|AEC04324.1| outer membrane protein A [Pasteurella multocida]
Length = 358
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 49/121 (40%), Gaps = 10/121 (8%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLG-SWLEKHDCDFLIEGHADELGSRNSSIALGLRR 105
++ V F ++PA VL + + + G+ D LGS ++ L RR
Sbjct: 238 TLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSASVAVAGYTDRLGSDAYNLKLSQRR 297
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLKGC 156
A V NY VA+G++ + + T +G+ P A +R + +KG
Sbjct: 298 ADTVANYLVAKGVAQNAISATGHGEANPVTGNKCDSVKGRKALIACLADDRPVEIAVKGN 357
Query: 157 R 157
+
Sbjct: 358 K 358
>gi|219681692|ref|YP_002468078.1| outer membrane protein A precursor [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|219682247|ref|YP_002468631.1| outer membrane protein A precursor [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|257471385|ref|ZP_05635384.1| outer membrane protein A precursor [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|219621980|gb|ACL30136.1| outer membrane protein A precursor [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|219624535|gb|ACL30690.1| outer membrane protein A precursor [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|311086068|gb|ADP66150.1| outer membrane protein A precursor [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|311086640|gb|ADP66721.1| outer membrane protein A precursor [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
gi|311087225|gb|ADP67305.1| outer membrane protein A precursor [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
gi|311087744|gb|ADP67823.1| outer membrane protein A precursor [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
Length = 349
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 60/136 (44%), Gaps = 19/136 (13%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHA 89
+ + L EQ+S + +++ F +S ++P+ L+ L ++ ++ GHA
Sbjct: 213 SSDDSEPLNEQYSV-LNENINFPFNSTELKPSSYDKLNKLDDDIKDMQLKNVSIVLLGHA 271
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY------ 143
D++GS + L RAY++ NY +RG S ++ V GK P ++
Sbjct: 272 DKIGSDEYNQKLSEDRAYSIKNYLASRGFSRDKITVKGMGKLYPL---TNQVCRDVVNKP 328
Query: 144 ------AKNRRAIVFL 153
A +RR + +
Sbjct: 329 LLISCLAPDRRVEIEV 344
>gi|298206796|ref|YP_003714975.1| OmpA family protein [Croceibacter atlanticus HTCC2559]
gi|83849428|gb|EAP87296.1| OmpA family protein [Croceibacter atlanticus HTCC2559]
Length = 630
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 59/139 (42%), Gaps = 8/139 (5%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+++D ++ ++ +Q + ++++FD I P VL + +
Sbjct: 490 ESIDFELERAKDMIVVDETTKQEKIDL-ETIYFDFDKADITPKAAAVLDKAVKLMNFYPD 548
Query: 82 DFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHD 139
+ IE H D GS+ + +L RRA A Y ++GI+ R+ YG++ D
Sbjct: 549 MVINIESHTDSRGSKKYNYSLSDRRAKATQQYIYSQGIAEERIVSAQGYGEQRLLNECKD 608
Query: 140 -----EDAYAKNRRAIVFL 153
++ + NRR+ +
Sbjct: 609 GVKCSDEEHDVNRRSDFII 627
>gi|261252913|ref|ZP_05945486.1| outer membrane protein [Vibrio orientalis CIP 102891]
gi|260936304|gb|EEX92293.1| outer membrane protein [Vibrio orientalis CIP 102891]
Length = 203
Score = 55.6 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 60/139 (43%), Gaps = 1/139 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
D + D + + + + F S I+P + + + +LE +
Sbjct: 52 DLCPQTPAKADIDNDGCGTYIKTEEEMDLHILFQNDSSIIQPMFLAQIREMSEFLEAYPS 111
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++G+A ++G + L RRA AV + G+S+SR+++ +G G DE
Sbjct: 112 TSIELQGYASKVGKAEYNQKLSERRAEAVEAALLDNGVSSSRVRIVGFGDTRLDELGDDE 171
Query: 141 DAYAKNRRAIVFLKGCRAN 159
++A NR+ I + G + N
Sbjct: 172 VSHAMNRKVIATVVGLKGN 190
>gi|56479209|ref|YP_160798.1| lipoprotein [Aromatoleum aromaticum EbN1]
gi|56315252|emb|CAI09897.1| hypothetical protein, possible lipoprotein [Aromatoleum aromaticum
EbN1]
Length = 226
Score = 55.6 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 34/105 (32%), Gaps = 2/105 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
V F S + A L+ I G D G + L L RA AV
Sbjct: 116 IVQFALGSAKLSRAARSQLNA-AMDDLLQVRRITIIGRTDSTGPLAFNQDLALARALAVR 174
Query: 111 NYFVARGIS-ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
++ + A+ + + + G A+NRR V +
Sbjct: 175 DHLRRTHPALAATLTLRARGACCFIAPNDTLAGRAQNRRVEVVFQ 219
>gi|86138174|ref|ZP_01056749.1| OmpA/MotB domain protein [Roseobacter sp. MED193]
gi|85825201|gb|EAQ45401.1| OmpA/MotB domain protein [Roseobacter sp. MED193]
Length = 194
Score = 55.6 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 46/127 (36%), Gaps = 4/127 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF-LI 85
+ ++ N S + + FD S ++RP L N+ + ++ I
Sbjct: 66 QETATVATANTDYSPVDRQSQINLQISFDFDSATLRPDQQPKLVNMCASMQALQGTVFQI 125
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYA 144
GH D GS + L L RA V + ++ I +K G+ P +
Sbjct: 126 IGHTDSSGSARYNERLSLLRAQEVRRHLISNCGIDEDMLKAIGMGEAAPYNSANPRAD-- 183
Query: 145 KNRRAIV 151
+NRR
Sbjct: 184 ENRRVEF 190
>gi|84501388|ref|ZP_00999593.1| OmpA/MotB domain protein [Oceanicola batsensis HTCC2597]
gi|84390679|gb|EAQ03167.1| OmpA/MotB domain protein [Oceanicola batsensis HTCC2597]
Length = 192
Score = 55.6 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 50/126 (39%), Gaps = 8/126 (6%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIE 86
+ D+ E + ++Q + + FD S ++R L+ L ++ D F I
Sbjct: 69 PEAQDSTYVEFAPEDQVNIQIS----FDFDSAALRDDQKPKLATLCQVMKSADIGTFRII 124
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAK 145
GH D GS + + L L RA V Y I R++ G++ P D A
Sbjct: 125 GHTDASGSASYNERLSLLRAEEVKRYLSGDCGIEEQRLEAVGVGEQFPLDK-ADPRGDA- 182
Query: 146 NRRAIV 151
NRR
Sbjct: 183 NRRVEF 188
>gi|37704610|gb|AAR01577.1| OprF [Pseudomonas sp. MFY57]
Length = 316
Score = 55.2 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 50/119 (42%), Gaps = 4/119 (3%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD ++P + NL ++++
Sbjct: 198 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQ 257
Query: 79 H-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSV 135
+ ++EGH D +G + L RRA AV + + +SR+ YG+ P
Sbjct: 258 YPQTTTVVEGHTDSVGPDAYNQKLSERRANAVKQVLTQQYGVESSRVDSVGYGETRPVA 316
>gi|37704632|gb|AAR01588.1| OprF [Pseudomonas sp. MFY78]
Length = 317
Score = 55.2 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 50/119 (42%), Gaps = 4/119 (3%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD ++P + NL ++++
Sbjct: 199 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQ 258
Query: 79 HDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSV 135
+ +EGH D +G + L RRA AV + + +SR++ YG+ P
Sbjct: 259 YPSTTTTVEGHTDSVGPDAYNQKLSERRASAVKQVLTGQYGVESSRVQSVGYGESRPVA 317
>gi|171319658|ref|ZP_02908751.1| type IV / VI secretion system protein, DotU family [Burkholderia
ambifaria MEX-5]
gi|171095111|gb|EDT40119.1| type IV / VI secretion system protein, DotU family [Burkholderia
ambifaria MEX-5]
Length = 404
Score = 55.2 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 81 CDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ G+AD + + S+ AL RA V V+ +SA + V G
Sbjct: 326 ATVHVAGYADSTSARSTRQASNQALSEARARHVAQILVSADVSAPHISVEGNGDADSLAD 385
Query: 137 GHDEDAYAKNRRAIVFL 153
A+NRR V +
Sbjct: 386 NGTAAGRARNRRVEVTI 402
>gi|302187242|ref|ZP_07263915.1| OmpA/MotB [Pseudomonas syringae pv. syringae 642]
Length = 386
Score = 55.2 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 28/69 (40%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
LI GHAD G ++ + RA +V F G+ +R+ G MP
Sbjct: 214 VLILGHADTSGPTEANQKISQERAQSVAAIFRLSGLERNRLSQRGMGAVMPRAANDSLQG 273
Query: 143 YAKNRRAIV 151
A NRR +
Sbjct: 274 RALNRRVEI 282
>gi|170720335|ref|YP_001748023.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619]
gi|169758338|gb|ACA71654.1| OmpA/MotB domain protein [Pseudomonas putida W619]
Length = 327
Score = 55.2 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 33/71 (46%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
L+ GHAD G+ ++ L L RA +V F G+ R+ + G EMP +
Sbjct: 162 VLVLGHADTSGAAATNQKLSLERAASVSAIFRLSGLKRDRLSLKGMGSEMPRAANDSVEG 221
Query: 143 YAKNRRAIVFL 153
A NRR + L
Sbjct: 222 RALNRRVEMLL 232
>gi|319953905|ref|YP_004165172.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
gi|319422565|gb|ADV49674.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
Length = 645
Score = 55.2 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 48/110 (43%), Gaps = 6/110 (5%)
Query: 51 SVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
+++FD + Y+IRP + + + + + H D G ++ L +RA +
Sbjct: 535 TIYFDLNKYNIRPDAEVEIQKVIAAMEKYPSLKIKVNSHTDSRGKDAYNLWLSQKRAEST 594
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDE-----DAYAKNRRAIVFLK 154
Y V++GISA R++ +G+ + + NRR+ ++
Sbjct: 595 VGYMVSKGISADRLEGEGFGETKLVNGCGNNSKCSSKEHDLNRRSEFIIR 644
>gi|94500304|ref|ZP_01306837.1| chemotaxis protein MotB [Oceanobacter sp. RED65]
gi|94427603|gb|EAT12580.1| chemotaxis protein MotB [Oceanobacter sp. RED65]
Length = 242
Score = 55.2 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 46/136 (33%), Gaps = 6/136 (4%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSS------YSIRPADIQVLSNLGSWLE 77
D + P+ S++ + S V F + I + + L +
Sbjct: 85 SDISAALPENEYTLSTMDQWISIEVPMGKLFRWDNRQNRYGSRITQEGAKTMVELVNVFA 144
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+ D IE + + ++ G + A+ Y G+ SR+ V++YG P
Sbjct: 145 EGDEAINIEVFSADTLDDDNPWQHGAMQGAAIVQYLQLEGLQPSRLAVSNYGPYQPIATN 204
Query: 138 HDEDAYAKNRRAIVFL 153
DE N R +
Sbjct: 205 DDEQGRQLNARVNFMI 220
>gi|37704622|gb|AAR01583.1| OprF [Pseudomonas sp. MFY69]
Length = 318
Score = 55.2 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 49/119 (41%), Gaps = 4/119 (3%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFS--SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
DN+D +P V ++ + V V FD ++P + NL ++++
Sbjct: 200 CDNVDKCPDTPANVTVDADGCPAVAEVVRVELDVKFDFDKSVVKPNSYGDIKNLADFMKQ 259
Query: 79 H-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSV 135
+ +EGH D +G + L RRA AV + + +SR+ YG+ P
Sbjct: 260 YPQTTTTVEGHTDSVGPDAYNQKLSERRANAVKQVLTQQYGVESSRVDSVGYGETRPVA 318
>gi|66047081|ref|YP_236922.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
gi|63257788|gb|AAY38884.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
Length = 386
Score = 55.2 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 29/69 (42%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
LI GHAD G +++ + RA +V F G+ +R+ G MP
Sbjct: 214 VLILGHADTSGPTDANQKISQERAQSVAAIFRLSGLERNRLSQRGMGAVMPRAANDSLQG 273
Query: 143 YAKNRRAIV 151
A NRR +
Sbjct: 274 RALNRRVEI 282
>gi|160898923|ref|YP_001564505.1| OmpA/MotB domain-containing protein [Delftia acidovorans SPH-1]
gi|160364507|gb|ABX36120.1| OmpA/MotB domain protein [Delftia acidovorans SPH-1]
Length = 168
Score = 55.2 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 48/117 (41%), Gaps = 5/117 (4%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRN 96
+ + + + + F S + + LG L+ +EGH D+ GS
Sbjct: 53 AQADQGWELQMSGKLLFGFDSAEVGAQARTKVLELGRALKGVGIERLRVEGHTDDRGSDA 112
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L LRRA AV + G++ ++V G+ MP V + NRR + +
Sbjct: 113 YNMRLSLRRAEAVADVLAEAGLARQDIEVKGLGRAMPVVPSDAAE----NRRVAIVV 165
>gi|262166026|ref|ZP_06033763.1| outer membrane protein [Vibrio mimicus VM223]
gi|262025742|gb|EEY44410.1| outer membrane protein [Vibrio mimicus VM223]
Length = 278
Score = 55.2 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 54/142 (38%), Gaps = 1/142 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-K 78
+ + +N SL E+ + + F +S I P + L+ L+ +
Sbjct: 125 TSQTRCVPPQNEQSFVNSLSLIEELNRLLNVDNQFAINSTEINPKYMGNLAIAADKLKDR 184
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
D + GHAD G+ + L + RA V Y G++ R+ S G+ +P G
Sbjct: 185 QDLTLSVTGHADSSGNSEFNEKLAMGRAEQVKRYLTIFGLAPERITTHSLGESLPLYVGE 244
Query: 139 DEDAYAKNRRAIVFLKGCRANT 160
NRR + + + T
Sbjct: 245 TPGVKLTNRRVSIEIITADSPT 266
>gi|237752655|ref|ZP_04583135.1| motility protein MotB [Helicobacter winghamensis ATCC BAA-430]
gi|229376144|gb|EEO26235.1| motility protein MotB [Helicobacter winghamensis ATCC BAA-430]
Length = 233
Score = 55.2 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 50/141 (35%), Gaps = 8/141 (5%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIR-PADIQVLSNLGSWLEKH 79
D + S + + + + + F T S + P+ I L L L +
Sbjct: 74 TDYNEVNRISNGPSVELEEAERGVIIRIPEELLFATGSAELTNPSGIAFLKRLSLELLRM 133
Query: 80 DCDFLIE--GHADELGS-----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
L++ GH D + ++ L + R V + +G+ +R+ G+
Sbjct: 134 PKAVLVKAIGHTDNVPMRANAVFADNLELSVARGVNVAELLLKQGLEKNRILGGGEGEFS 193
Query: 133 PSVYGHDEDAYAKNRRAIVFL 153
P AKNRR +++
Sbjct: 194 PIANNDIPALRAKNRRVDLYV 214
>gi|162146328|ref|YP_001600787.1| hypothetical protein GDI_0503 [Gluconacetobacter diazotrophicus PAl
5]
gi|161784903|emb|CAP54446.1| putative outer membrane protein [Gluconacetobacter diazotrophicus
PAl 5]
Length = 326
Score = 55.2 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 38/117 (32%), Gaps = 11/117 (9%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIEGHADELGSRN--- 96
V F + P I + L + ++GHAD +
Sbjct: 207 FQSEVLFPPGGAELSPKGIADIRALARTFHQVSAQIPASIPWILRVDGHADRQPIHSAFA 266
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA V +A GIS + T + P A+A+NRR L
Sbjct: 267 SNWELSSARAITVVKLLIAEGISPHHLAATGFADFQPLDTHETPAAFARNRRIEFRL 323
>gi|15919973|ref|NP_361033.1| TraQ protein [Plasmid pSB102]
gi|15722272|emb|CAC79164.1| TraQ protein [Plasmid pSB102]
Length = 184
Score = 55.2 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 57/144 (39%), Gaps = 5/144 (3%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+++ + + S V+ + ++ +S SV+F +S + RP QV +
Sbjct: 41 VLSLRAELADAQDKLRNQSTQPVVLAAPVKPALPASQTVSVYFPFNSSAFRPTQTQV-AT 99
Query: 72 LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV--TSYG 129
L L + + G D + + L RA A N+ VA+G+S ++ V S G
Sbjct: 100 LLPLLGGNVRQIWVRGRTDGDRPSAADERVALNRALAAKNWLVAQGVSPLKISVNYVSAG 159
Query: 130 KEMPSVYGHDEDAYAKNRRAIVFL 153
A+NRR + +
Sbjct: 160 DY--VADNVSAAGRAQNRRVDIEV 181
>gi|332300760|ref|YP_004442681.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707]
gi|332177823|gb|AEE13513.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707]
Length = 296
Score = 55.2 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 5/98 (5%)
Query: 57 SSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA 115
+ VL +L +E D IEGH E G + L RA ++ ++
Sbjct: 201 GKADLTDETKFVLHDLAKLMEANPDLKLKIEGHTSEEGDEAFNQRLSEERAQVAVDFLIS 260
Query: 116 RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+GISA R++ G P + E NRR +
Sbjct: 261 QGISADRLQAEGKGSSEPIDPNNPEV----NRRTEFIV 294
>gi|149918190|ref|ZP_01906682.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
gi|149820950|gb|EDM80357.1| OmpA domain protein [Plesiocystis pacifica SIR-1]
Length = 780
Score = 55.2 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 30/78 (38%), Gaps = 3/78 (3%)
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ H D+ G + RA AV +Y V +G+ A R++ +G + P
Sbjct: 696 HPEYGKVQVRVHTDDRG---NPKKRSQDRADAVVSYLVKKGVPAGRLEAKGWGAKDPVAV 752
Query: 137 GHDEDAYAKNRRAIVFLK 154
D KN R ++
Sbjct: 753 NITSDGRRKNNRTEFRVR 770
>gi|115375610|ref|ZP_01462867.1| putative outer membrane lipoprotein [Stigmatella aurantiaca
DW4/3-1]
gi|115367386|gb|EAU66364.1| putative outer membrane lipoprotein [Stigmatella aurantiaca
DW4/3-1]
Length = 206
Score = 55.2 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 59/170 (34%), Gaps = 16/170 (9%)
Query: 1 MQYSTIFIILSAITM----MSISGIDNLDTKISSPDTVLNESSLQEQF-SSSVGDSVFFD 55
M+ + + +S + + ++ S ++ E + + + + F
Sbjct: 36 MRLKALCMAVSLLAVPGMALAQSPVEQFKKAAGKASKSTLEKKINTKLTEDARKNQCSFK 95
Query: 56 TSSYSIRPADIQVLSNLG----------SWLEKHDCDFLIEGHADELGSRNSSIALGLRR 105
T + + Q L NL + F + GH D G + AL +R
Sbjct: 96 TGTDVLEAGCDQKLKNLTAALVEAKKQLDAGGVKNYQFEVSGHTDSSGDAAKNKALSEKR 155
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSV-YGHDEDAYAKNRRAIVFLK 154
A + V+RGI + + G E P V AKNRR + ++
Sbjct: 156 AAVIVKELVSRGIPRAEILAVGRGSEQPLVKPDDTAAKKAKNRRYEIQVR 205
>gi|310814990|ref|YP_003962954.1| OmpA domain protein [Ketogulonicigenium vulgare Y25]
gi|308753725|gb|ADO41654.1| OmpA domain protein [Ketogulonicigenium vulgare Y25]
Length = 299
Score = 55.2 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 53/148 (35%), Gaps = 4/148 (2%)
Query: 9 ILSAITMMSISGIDNLDTKISSP--DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADI 66
++A+ + I +P + + + + E +V D + F+T S + P
Sbjct: 146 SVAALHVQLIEATAGAAPMPIAPIAEALPSWAMTLEVEGHAVIDGLAFETGSAAPLPGAD 205
Query: 67 QVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
L L WL LI GH D GS +++ + RA AV + +
Sbjct: 206 VALGALADWLRADPARRVLIVGHTDASGSLAANMTISQARAEAVAQRLRSEFAVPAAQLQ 265
Query: 126 TSYGKEM-PSVYGHDEDAYAKNRRAIVF 152
+ M P DE A NRR
Sbjct: 266 AAGAGYMAPRAPNDDEAGRALNRRVEAV 293
>gi|83858639|ref|ZP_00952161.1| OmpA family protein [Oceanicaulis alexandrii HTCC2633]
gi|83853462|gb|EAP91314.1| OmpA family protein [Oceanicaulis alexandrii HTCC2633]
Length = 355
Score = 55.2 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLR 104
G V+F I V++ + I+GHAD G+ + ++ L R
Sbjct: 244 EDAGFVVYFAWDRSEISSQAAAVINQAVSQARNCGVASVSIDGHADRSGAASYNVGLSER 303
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA AV + V G+ AS + + ++G+ P+V D NRRA V +
Sbjct: 304 RARAVRDEMVRLGVPASAISLEAFGESRPAVETPDGVREPLNRRAEVMI 352
>gi|109896581|ref|YP_659836.1| OmpA/MotB [Pseudoalteromonas atlantica T6c]
gi|109698862|gb|ABG38782.1| OmpA/MotB [Pseudoalteromonas atlantica T6c]
Length = 368
Score = 55.2 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 54/142 (38%), Gaps = 8/142 (5%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
+ + D ++ ++ E ++E + F +S I + + ++++
Sbjct: 227 CANTPSTDQVDATGCSIFTEVEVEETL------RILFANNSAEIANRANSDIRDFAAFMK 280
Query: 78 KHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSV 135
+ +IEG+A G + + L RA AV + I +R+ +G+
Sbjct: 281 RFPSTDTVIEGYASAPGESDYNQWLSEERAKAVRMVLIEDYDIKPARITAVGFGESKLLD 340
Query: 136 YGHDEDAYAKNRRAIVFLKGCR 157
++A NRR + + +
Sbjct: 341 APTAKEANKINRRIVARVSASK 362
>gi|228018139|gb|ACP52748.1| fibronectin-binding protein [Campylobacter jejuni]
gi|228018141|gb|ACP52749.1| fibronectin-binding protein [Campylobacter jejuni]
gi|228018143|gb|ACP52750.1| fibronectin-binding protein [Campylobacter jejuni]
gi|228018145|gb|ACP52751.1| fibronectin-binding protein [Campylobacter jejuni]
gi|228018147|gb|ACP52752.1| fibronectin-binding protein [Campylobacter jejuni]
gi|228018151|gb|ACP52754.1| fibronectin-binding protein [Campylobacter jejuni]
gi|228018153|gb|ACP52755.1| fibronectin-binding protein [Campylobacter jejuni]
gi|228018155|gb|ACP52756.1| fibronectin-binding protein [Campylobacter jejuni]
gi|228018159|gb|ACP52758.1| fibronectin-binding protein [Campylobacter jejuni]
gi|228018161|gb|ACP52759.1| fibronectin-binding protein [Campylobacter jejuni]
gi|228018165|gb|ACP52761.1| fibronectin-binding protein [Campylobacter jejuni]
Length = 211
Score = 55.2 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 47/129 (36%), Gaps = 1/129 (0%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+ ++ + + ++ F +I P + + +
Sbjct: 83 AVEEVADTRATPQAKCPVEPREGALLDENGCEKTISLEGHFGFDKTTINPTFQEKIKEIA 142
Query: 74 SW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
E D ++EGH D +GSR + L RRA +V N G+ SR+K YG++
Sbjct: 143 KVLDENERYDTILEGHTDNIGSRAYNQKLSERRAKSVANELEKYGVEKSRIKTVGYGQDN 202
Query: 133 PSVYGHDED 141
P ++
Sbjct: 203 PRSSNDTKE 211
>gi|78485864|ref|YP_391789.1| OmpA/MotB [Thiomicrospira crunogena XCL-2]
gi|78364150|gb|ABB42115.1| OmpA/MotB family protein [Thiomicrospira crunogena XCL-2]
Length = 248
Score = 55.2 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 46/137 (33%), Gaps = 6/137 (4%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ + + ++Q S + + F T ++P L L + ++
Sbjct: 97 KTYEKSQQESNIEVTIDEERQQVKVSFPERISFPTGEADLKPGFSVQLRKLKNLIDNTIL 156
Query: 82 DFLIEGHAD----ELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVY 136
GH D S+ L RA AV + I+ + +V P
Sbjct: 157 -VKAIGHTDKRPISSDRFRSNWELSSARAAAVIQQLIDDKIITPDQAEVIGVADTHPVDE 215
Query: 137 GHDEDAYAKNRRAIVFL 153
++ AYA NRR V L
Sbjct: 216 QENDAAYALNRRVEVVL 232
>gi|119384145|ref|YP_915201.1| hypothetical protein Pden_1404 [Paracoccus denitrificans PD1222]
gi|119373912|gb|ABL69505.1| OmpA/MotB domain protein [Paracoccus denitrificans PD1222]
Length = 463
Score = 55.2 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 42/120 (35%), Gaps = 14/120 (11%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH--------DCDFLIEGHADE-----LGS 94
V F ++ P ++ + L++ D ++GH D G
Sbjct: 341 FSSEVLFAPGEATLSPEGRTQVARVADMLKQISGDIPPEIDWMIRVDGHTDNLPLSGQGR 400
Query: 95 RNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA AV Y G A+R+ + P G +A A+NRR + L
Sbjct: 401 YRDNWELSQARALAVVRYMVDDLGFPATRLAPAGFADTRPVAQGDAPEARAQNRRIELKL 460
>gi|332520207|ref|ZP_08396671.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
gi|332044766|gb|EGI80960.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
Length = 648
Score = 55.2 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 50/129 (38%), Gaps = 12/129 (9%)
Query: 37 ESSLQEQFSSSVG-----DSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHAD 90
E L + +G + ++FD + IR L + ++ + + + H D
Sbjct: 518 EQELPAPLGTDIGPLLGINIIYFDLDKHYIRQDAEVELRKIIDFMNVYSNIKIDVRSHTD 577
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHD-----EDAYA 144
+ ++ L RRA A +Y V GI+ +R+ YG+ D E +
Sbjct: 578 SRNTSEYNLDLSNRRAQATIDYLVNVGGINRARLTGKGYGELQLRNRCGDGVPCSESEHQ 637
Query: 145 KNRRAIVFL 153
NRR+ +
Sbjct: 638 LNRRSEFII 646
>gi|317153383|ref|YP_004121431.1| OmpA/MotB domain-containing protein [Desulfovibrio aespoeensis
Aspo-2]
gi|316943634|gb|ADU62685.1| OmpA/MotB domain protein [Desulfovibrio aespoeensis Aspo-2]
Length = 254
Score = 55.2 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 44/124 (35%), Gaps = 5/124 (4%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
++ ++ S ++ F + + VL + + L+ ++ ++ GH D+
Sbjct: 123 TGVAADRDGVIFSADSAMLFAPGTADLAADADTVLDKVVTVLKDYNLSLVVRGHTDDRPI 182
Query: 95 RNSSIAL-----GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
R A A+ GI SR K Y P+ ++ KN+R
Sbjct: 183 STLKFPSNWELSSARAAVALDYILRESGIGISRAKAVGYADTRPAAPNDSDENRLKNQRV 242
Query: 150 IVFL 153
+L
Sbjct: 243 EFYL 246
>gi|167033774|ref|YP_001669005.1| OmpA/MotB domain-containing protein [Pseudomonas putida GB-1]
gi|166860262|gb|ABY98669.1| OmpA/MotB domain protein [Pseudomonas putida GB-1]
Length = 831
Score = 55.2 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 50/135 (37%), Gaps = 12/135 (8%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSI---RPADIQVLSNLGSW--LEKHDCDFLIEG 87
L SL+ + ++ F + LS + S + +I G
Sbjct: 695 DSLRAQSLRSIETITLESDTLFAFGRADFQSLKNEGQNQLSAIASKLLNTPNIGKVVISG 754
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK-- 145
HAD+LG ++ + +RA + Y V +G+ A + G P V + A+
Sbjct: 755 HADQLGDSQGNLQVSKQRAQTIRTYLVGKGVPAELVVAQGEGSRKPLVNCDMQQPRAQLI 814
Query: 146 -----NRRAIVFLKG 155
NRR + ++G
Sbjct: 815 KCLEPNRRVEIEVRG 829
>gi|330980557|gb|EGH78660.1| OmpA/MotB [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 830
Score = 55.2 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 49/130 (37%), Gaps = 12/130 (9%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSI---RPADIQVLSNLGSW--LEKHDCDFLIEGHADE 91
SL+ + ++ F + LS + + +I GHAD+
Sbjct: 698 TQSLKAIETITLESDTLFAFGRADFQSLKTEGQNQLSAIAGKLLNTPNIGKIVIAGHADQ 757
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK------ 145
LG S++ + +RA + Y V +G+ A + G E P V + A+
Sbjct: 758 LGDPQSNMQVSKQRAQTIKTYLVGKGVPAELVDAVGEGSEKPLVKCDMQQPRAQLIQCLE 817
Query: 146 -NRRAIVFLK 154
NRR + ++
Sbjct: 818 PNRRVEIEVR 827
>gi|330940416|gb|EGH43516.1| OmpA/MotB [Pseudomonas syringae pv. pisi str. 1704B]
Length = 830
Score = 55.2 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 49/130 (37%), Gaps = 12/130 (9%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSI---RPADIQVLSNLGSW--LEKHDCDFLIEGHADE 91
SL+ + ++ F + LS + + +I GHAD+
Sbjct: 698 TQSLKAIETITLESDTLFAFGRADFQSLKTEGQNQLSAIAGKLLNTPNIGKIVIAGHADQ 757
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK------ 145
LG S++ + +RA + Y V +G+ A + G E P V + A+
Sbjct: 758 LGDPQSNMQVSKQRAQTIKTYLVGKGVPAELVDAVGEGSEKPLVKCDMQQPRAQLIQCLE 817
Query: 146 -NRRAIVFLK 154
NRR + ++
Sbjct: 818 PNRRVEIEVR 827
>gi|330901436|gb|EGH32855.1| OmpA/MotB [Pseudomonas syringae pv. japonica str. M301072PT]
Length = 830
Score = 55.2 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 49/130 (37%), Gaps = 12/130 (9%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSI---RPADIQVLSNLGSW--LEKHDCDFLIEGHADE 91
SL+ + ++ F + LS + + +I GHAD+
Sbjct: 698 TQSLKAIETITLESDTLFAFGRADFQSLKTEGQNQLSAIAGKLLNTPNIGKIVIAGHADQ 757
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK------ 145
LG S++ + +RA + Y V +G+ A + G E P V + A+
Sbjct: 758 LGDPQSNMQVSKQRAQTIKTYLVGKGVPAELVDAVGEGSEKPLVKCDMQQPRAQLIQCLE 817
Query: 146 -NRRAIVFLK 154
NRR + ++
Sbjct: 818 PNRRVEIEVR 827
>gi|144898366|emb|CAM75230.1| flagellar motor protein MotB [Magnetospirillum gryphiswaldense
MSR-1]
Length = 319
Score = 55.2 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 46/116 (39%), Gaps = 12/116 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLG--------SWLEKHDCDFLIEGHADELGS----R 95
+ FD++S + + Q + L ++ + ++GH D+
Sbjct: 199 FQSELLFDSASADLGVSGEQQVRQLAKTLIDLSKQIPKEVNWVLRVDGHTDKRPIKSGRF 258
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
S+ L RA +V + G+ A R+ +G+ +P E A AKNRR +
Sbjct: 259 PSNWELSTARAISVIRTLIDAGVPADRLAAAGFGEFLPLDNSDSEAALAKNRRIEI 314
>gi|83593142|ref|YP_426894.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170]
gi|83576056|gb|ABC22607.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170]
Length = 229
Score = 55.2 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 51/140 (36%), Gaps = 13/140 (9%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG---SWLEKHDCDF 83
K + V+ Q+ S F++ S IRP I VL + +
Sbjct: 83 KSLQVEDVVGLGQDQQGLVIEFASSAFYEPGSADIRPTAIPVLEQVIATLNEPRYQGFQI 142
Query: 84 LIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
I+GH D++ S+ L RA V + + +G++ R+ +Y P V
Sbjct: 143 EIQGHTDDIPINTAQYPSNWELSGARATRVLRFMLDQGVAKERVLAIAYADVAPKVPNRT 202
Query: 140 EDAYA------KNRRAIVFL 153
+ A NRR V +
Sbjct: 203 PEGQAIPLNQELNRRIAVRV 222
>gi|270339898|ref|ZP_06203472.1| OmpA family protein [Prevotella bergensis DSM 17361]
gi|270333364|gb|EFA44150.1| OmpA family protein [Prevotella bergensis DSM 17361]
Length = 694
Score = 55.2 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 60/176 (34%), Gaps = 35/176 (19%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQEQFS------SSVGDSVFFDTSSYSIRPADI 66
+ + + G N ++ + QF+ ++ D++F+D ++R
Sbjct: 481 LFLAACQGYLNHQEEVRALVNPKESRDTTLQFALANISVPTLIDNIFYDFDKATLRDTSK 540
Query: 67 QVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
L L + E + + HAD G+ + L RRA +V NY +A GI+A R+
Sbjct: 541 VALDRLVTMLNENPNITIELSAHADYKGASTYNKRLSQRRAESVVNYLIAHGIAADRLTP 600
Query: 126 TSYGKEMPSVYG----------------------------HDEDAYAKNRRAIVFL 153
YGKE P E NRR +
Sbjct: 601 MGYGKEKPKTVNRKVAEKYNWLKAGDVLSEEFIKAMKDEKKQEICNQLNRRTEFLV 656
>gi|144898281|emb|CAM75145.1| Outer membrane protein and related peptidoglycan-associated lipo
protein [Magnetospirillum gryphiswaldense MSR-1]
Length = 300
Score = 55.2 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 53/139 (38%), Gaps = 8/139 (5%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLE 77
+G + + + + VFFD + P ++++ L +
Sbjct: 169 AGPKMSVVQPAPAKGTVAGTKPTNYL-------VFFDFDKADLLPEARGIIASALKAITA 221
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+ + G+ D G+ + + L RR AV + GI+A R+ V S G+ V
Sbjct: 222 EPQGMIKVTGYTDTSGTPSYNDKLSARRGNAVEQALLHGGIAADRISVDSRGESDLFVQT 281
Query: 138 HDEDAYAKNRRAIVFLKGC 156
D +NRRA + L G
Sbjct: 282 PDGVREPQNRRATIELMGK 300
>gi|126727642|ref|ZP_01743474.1| OmpA family protein [Rhodobacterales bacterium HTCC2150]
gi|126703058|gb|EBA02159.1| OmpA family protein [Rhodobacterales bacterium HTCC2150]
Length = 199
Score = 55.2 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 38/99 (38%), Gaps = 4/99 (4%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F T Y I +L++ + ++I GH D S ++ L RA AV N
Sbjct: 101 LFATDRYRITSKGRALLAD--FFNSSSAAAYVIVGHTDSRASDEYNMRLSQNRANAVANV 158
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
A + A + + YG+ MP NRR +
Sbjct: 159 --ASSLGARVVDIRHYGERMPRATNRTAAGRQANRRVEI 195
>gi|304320152|ref|YP_003853795.1| OmpA family protein [Parvularcula bermudensis HTCC2503]
gi|303299055|gb|ADM08654.1| OmpA family protein [Parvularcula bermudensis HTCC2503]
Length = 397
Score = 55.2 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 7/131 (5%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDC 81
T P E + E V+FD ++ A +++ ++
Sbjct: 270 VTQTCPPRPVDTAPEVTELEPLV------VYFDYDKSNLTDAANTLIAARAEEAIDADVA 323
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
++G+ D GS + + AL RRA V + VA G+ S + V + G+ P+ D
Sbjct: 324 SVTVQGNTDTAGSASYNQALSARRAKVVSDALVANGVDQSAITVEALGESNPAKPTGDGV 383
Query: 142 AYAKNRRAIVF 152
NRR V
Sbjct: 384 REPLNRRTEVT 394
>gi|330977950|gb|EGH77853.1| OmpA/MotB [Pseudomonas syringae pv. aptata str. DSM 50252]
Length = 378
Score = 55.2 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 28/69 (40%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
LI GHAD G ++ + RA +V F G+ +R+ G MP
Sbjct: 214 VLILGHADTSGPTEANQKISQERAQSVAAIFRLSGLERNRLSQRGMGAVMPRAANDSLQG 273
Query: 143 YAKNRRAIV 151
A NRR +
Sbjct: 274 RALNRRVEI 282
>gi|329847556|ref|ZP_08262584.1| ompA family protein [Asticcacaulis biprosthecum C19]
gi|328842619|gb|EGF92188.1| ompA family protein [Asticcacaulis biprosthecum C19]
Length = 438
Score = 55.2 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 1/104 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAV 109
+V+F +S + + V+S + GHAD GS +I L RA V
Sbjct: 333 TVYFPFNSATPTADGLAVISAAAQQARSQPGAPVTVTGHADTSGSAPYNIQLSQNRARMV 392
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ + G+ AS + G+ P+V + A+NRRA + +
Sbjct: 393 ADGLIQMGVPASAVNTDWKGEAQPAVPTGNGVKNAENRRATISI 436
>gi|71738017|ref|YP_272433.1| OmpA domain-containing protein [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|71558570|gb|AAZ37781.1| OmpA domain protein [Pseudomonas syringae pv. phaseolicola 1448A]
Length = 830
Score = 55.2 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 49/130 (37%), Gaps = 12/130 (9%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSI---RPADIQVLSNLGSW--LEKHDCDFLIEGHADE 91
SL+ + ++ F + LS + + +I GHAD+
Sbjct: 698 TQSLKAIETITLESDTLFAFGRADFQSLKTEGQNQLSAIAGKLLSTPNIGKIVIAGHADQ 757
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK------ 145
LG S++ + +RA + Y V +G+ A + G E P V + A+
Sbjct: 758 LGDPQSNMQVSKQRAQTIKTYLVGKGVPAELVDAVGEGSEKPLVNCDMQQPRAQLIQCLE 817
Query: 146 -NRRAIVFLK 154
NRR + ++
Sbjct: 818 PNRRVEIEVR 827
>gi|209543669|ref|YP_002275898.1| hypothetical protein Gdia_1504 [Gluconacetobacter diazotrophicus
PAl 5]
gi|209531346|gb|ACI51283.1| OmpA/MotB domain protein [Gluconacetobacter diazotrophicus PAl 5]
Length = 326
Score = 55.2 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 38/117 (32%), Gaps = 11/117 (9%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIEGHADELGSRN--- 96
V F + P I + L + ++GHAD +
Sbjct: 207 FQSEVLFPPGGAELSPKGIADIRALARTFHQVSAQIPASIPWILRVDGHADRQPIHSAFA 266
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA V +A GIS + T + P A+A+NRR L
Sbjct: 267 SNWELSSARAITVVKLLIAEGISPHHLAATGFADFQPLDTHETPAAFARNRRIEFRL 323
>gi|295691255|ref|YP_003594948.1| OmpA/MotB domain-containing protein [Caulobacter segnis ATCC 21756]
gi|295433158|gb|ADG12330.1| OmpA/MotB domain protein [Caulobacter segnis ATCC 21756]
Length = 406
Score = 54.8 bits (130), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 1/104 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAV 109
V+F + P V++ + ++ GH D GS ++ L RRA AV
Sbjct: 301 IVYFPFDQSVLTPEAQSVVTEAAKYSNDGKATKIIVVGHTDTSGSPKYNVKLSERRAKAV 360
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ V++G+S + V G+ P+V D NRR+ + +
Sbjct: 361 ADALVSQGVSKDVLGVDWKGESAPAVATGDGVKEPLNRRSTISI 404
>gi|262171113|ref|ZP_06038791.1| outer membrane protein [Vibrio mimicus MB-451]
gi|261892189|gb|EEY38175.1| outer membrane protein [Vibrio mimicus MB-451]
Length = 278
Score = 54.8 bits (130), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 52/135 (38%), Gaps = 1/135 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-K 78
+ + +N SL E+ + + F +S I P + L+ L+ +
Sbjct: 125 TSQTRCVPPQNEQSFVNSLSLIEELNRLLNVDNQFAINSTEINPKYMGNLAIAADKLKAR 184
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
D + GHAD G+ + L + RA V Y G++ R+ S G+ +P G
Sbjct: 185 QDLTLSVTGHADSSGNSEFNEKLAMGRAEQVKRYLTIFGLAPERITTHSLGESLPLYVGE 244
Query: 139 DEDAYAKNRRAIVFL 153
NRR + +
Sbjct: 245 TPGVKLTNRRVSIEI 259
>gi|258625023|ref|ZP_05719945.1| Outer membrane protein [Vibrio mimicus VM603]
gi|258582691|gb|EEW07518.1| Outer membrane protein [Vibrio mimicus VM603]
Length = 278
Score = 54.8 bits (130), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 52/135 (38%), Gaps = 1/135 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-K 78
+ + +N SL E+ + + F +S I P + L+ L+ +
Sbjct: 125 TSQTRCVPPQNEQSFVNSLSLIEELNRLLNVDNQFAINSTEINPKYMGNLAIAADKLKAR 184
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
D + GHAD G+ + L + RA V Y G++ R+ S G+ +P G
Sbjct: 185 QDLTLSVTGHADSSGNSEFNEKLAMGRAEQVKRYLTIFGLAPERITTHSLGESLPLYVGE 244
Query: 139 DEDAYAKNRRAIVFL 153
NRR + +
Sbjct: 245 TPGVKLTNRRVSIEI 259
>gi|46202758|ref|ZP_00052660.2| COG2885: Outer membrane protein and related
peptidoglycan-associated (lipo)proteins
[Magnetospirillum magnetotacticum MS-1]
Length = 382
Score = 54.8 bits (130), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAV 109
++ FD S + P +Q L + + + G+ D LG+ ++++ L +RA AV
Sbjct: 149 TINFDLGSAKLSPQALQTLKEAAAAQAQMHAPLVSVAGYTDTLGAADANLRLSRQRADAV 208
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
V G++ + + + G+ +V D A AKNRR + L G
Sbjct: 209 TAELVKLGVNPAIISENALGETKLAVATGDNKAEAKNRRVEITLAG 254
>gi|260062573|ref|YP_003195653.1| outer membrane protein OmpA [Robiginitalea biformata HTCC2501]
gi|88784140|gb|EAR15310.1| outer membrane protein OmpA [Robiginitalea biformata HTCC2501]
Length = 375
Score = 54.8 bits (130), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 6/106 (5%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F S + L + ++++++ F I+ HAD G + L RRA V +Y
Sbjct: 267 FAFDSSYLDAEAKAKLEAIAAFMKRNPELTFSIQAHADSRGPEKYNQWLTERRAQRVADY 326
Query: 113 FVARGISASRMKVTSYGKEMPSVYGH-----DEDAYAKNRRAIVFL 153
GI R++V G+ + +A NRR +V++
Sbjct: 327 LTGEGIRMERLQVEGLGESQLLNHCSDGVRCTAAEHAVNRRGVVYI 372
>gi|304319913|ref|YP_003853556.1| flagellar motor protein [Parvularcula bermudensis HTCC2503]
gi|303298816|gb|ADM08415.1| flagellar motor protein [Parvularcula bermudensis HTCC2503]
Length = 343
Score = 54.8 bits (130), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 15/121 (12%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEK--------HDCDFLIEGHAD-------EL 92
V V F + S + PA VL + + + ++ ++GHAD
Sbjct: 220 VEGDVLFGSCSTELTPAARDVLRTVAAAINDVRRDLDTDYEWVLRVDGHADQVPLGAACR 279
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+S++ L RRA +V + ++G+ A R+ +G P V G D + A+NRR
Sbjct: 280 ALFDSNLQLSTRRALSVVEFLSSQGVPADRLVAAGFGDAYPLVAGRDPASLAQNRRIEFK 339
Query: 153 L 153
L
Sbjct: 340 L 340
>gi|88861307|ref|ZP_01135938.1| outer membrane protein A [Pseudoalteromonas tunicata D2]
gi|88816686|gb|EAR26510.1| outer membrane protein A [Pseudoalteromonas tunicata D2]
Length = 358
Score = 54.8 bits (130), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 39/101 (38%), Gaps = 1/101 (0%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FD +++ + + G+ D GS+ + L LRRA A+ Y
Sbjct: 254 LFDFDKSAVK-ETQALKDLAAHLAANPQAQAAVTGYTDSQGSKEYNEKLALRRANAIAKY 312
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
A G++AS++ V S G+ NRR + +
Sbjct: 313 LTANGVNASQLTVKSVGETDLFASNATIAERLNNRRVTIDV 353
>gi|162454713|ref|YP_001617080.1| hypothetical protein sce6431 [Sorangium cellulosum 'So ce 56']
gi|161165295|emb|CAN96600.1| Putative outer membrane protein [Sorangium cellulosum 'So ce 56']
Length = 293
Score = 54.8 bits (130), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 42/129 (32%), Gaps = 16/129 (12%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH----DCDFLIEGHADELG--- 93
+ S+ V FD+ +++ ++L + + ++ D+ + GH D
Sbjct: 150 NNRMVISLPGDVLFDSGRETLKKEGKEILLKVATVVKNDKSLLQRDYQVAGHTDNKPLVG 209
Query: 94 -SRNSSIALGLRRAYAVFNYFVARGISAS--------RMKVTSYGKEMPSVYGHDEDAYA 144
+ L L RA V + V+ + P ++
Sbjct: 210 GQFRDNWGLSLMRAREVLVFLVSPADVKGGGGALPVANWSAAGFADTDPVATNDTDEGRQ 269
Query: 145 KNRRAIVFL 153
KNRR + +
Sbjct: 270 KNRRCDLIV 278
>gi|89069601|ref|ZP_01156940.1| OmpA family protein [Oceanicola granulosus HTCC2516]
gi|89044799|gb|EAR50899.1| OmpA family protein [Oceanicola granulosus HTCC2516]
Length = 176
Score = 54.8 bits (130), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 4/104 (3%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
+ + F T SY I A+ Q L+ LI GH DE S ++ L RA
Sbjct: 73 MPNEQLFATDSYRISHANKQRLAQFFQQANAFGY--LIYGHTDERASYEYNVRLSENRAR 130
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
VA + A + V + + P G + A+ +NRR +
Sbjct: 131 --AVAEVAASVGARIVDVKGFSESQPRAEGSNPAAWQQNRRVEI 172
>gi|126668189|ref|ZP_01739150.1| OmpA/MotB [Marinobacter sp. ELB17]
gi|126627338|gb|EAZ97974.1| OmpA/MotB [Marinobacter sp. ELB17]
Length = 465
Score = 54.8 bits (130), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 44/117 (37%), Gaps = 8/117 (6%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGS-------RN 96
+ +S+ F++ S I A L+ L L+ I+GH+D
Sbjct: 330 VIKLPESIVFNSGSARIGKAGQHTLTLLADALKSFPDHLISIQGHSDSRSIAPALQSLYP 389
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L RA + GI SRM+ + P V D + KNRR V L
Sbjct: 390 TNWELSASRAASAVRVLREAGIDPSRMQAVGFADARPLVKEIDTVSRRKNRRIEVLL 446
>gi|144900188|emb|CAM77052.1| conserved hypothetical protein, secreted [Magnetospirillum
gryphiswaldense MSR-1]
Length = 196
Score = 54.8 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 56/141 (39%), Gaps = 6/141 (4%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDS-----VFFDTSSYSIRPADIQ-VLSNLG 73
+ P +++ D ++F + + + P + V+ +
Sbjct: 56 ASAGEKPSPAKPLDEARIKQTWADALAAMPDRPVTFQLYFSSGTADLLPEAAELVVQAVD 115
Query: 74 SWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
++ +I GHAD +GS + + RRA V N V RG+ + +S+GK P
Sbjct: 116 LAKKRPHVFIMIAGHADAVGSDEVNDRISRRRAEVVRNLVVERGLPPRAIVASSHGKRNP 175
Query: 134 SVYGHDEDAYAKNRRAIVFLK 154
V D A +NRR + L+
Sbjct: 176 LVPTKDGVAEPRNRRVTLTLQ 196
>gi|84515254|ref|ZP_01002616.1| OmpA domain protein [Loktanella vestfoldensis SKA53]
gi|84510537|gb|EAQ06992.1| OmpA domain protein [Loktanella vestfoldensis SKA53]
Length = 497
Score = 54.8 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/153 (20%), Positives = 60/153 (39%), Gaps = 10/153 (6%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQ 67
I L M + + +++ + + + ++ S++ F + S ++ ++
Sbjct: 349 ISLQGTRMTAAILSASTGATLAAVQNLSRDLATADRLSTTFR----FASGSANLDNKALE 404
Query: 68 VLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR---GISAS 121
+ + +L LI G D++G + + L L RA +V N V + A
Sbjct: 405 DVQRMVDFLNSPAARNREILIIGFTDDVGRFDLNERLALLRAGSVRNALVTALGGDVLAG 464
Query: 122 RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
R V SYG P D NRR ++L+
Sbjct: 465 RTSVASYGPLAPVGCNDTADGRESNRRVEIWLR 497
>gi|258621333|ref|ZP_05716367.1| Outer membrane protein [Vibrio mimicus VM573]
gi|258586721|gb|EEW11436.1| Outer membrane protein [Vibrio mimicus VM573]
Length = 278
Score = 54.8 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 52/135 (38%), Gaps = 1/135 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-K 78
+ + +N SL E+ + + F +S I P + L+ L+ +
Sbjct: 125 TSQTRCVPPQNEQSFVNSLSLIEELNRLLNVDNQFAINSTEINPKYMGNLAIAADKLKAR 184
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
D + GHAD G+ + L + RA V Y G++ R+ S G+ +P G
Sbjct: 185 QDLTLSVTGHADSSGNAEFNEKLAMGRAEQVKRYLTIFGLAPERITTHSLGESLPLYVGE 244
Query: 139 DEDAYAKNRRAIVFL 153
NRR + +
Sbjct: 245 TPGVKLTNRRVSIEI 259
>gi|254699266|ref|ZP_05161094.1| flagellar motor protein MotB [Brucella suis bv. 5 str. 513]
gi|261749708|ref|ZP_05993417.1| flagellar motor protein MotB [Brucella suis bv. 5 str. 513]
gi|261739461|gb|EEY27387.1| flagellar motor protein MotB [Brucella suis bv. 5 str. 513]
Length = 345
Score = 54.8 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 47/142 (33%), Gaps = 9/142 (6%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSNLGSWL 76
+ P + ++ + D V F S +Q+L + +
Sbjct: 203 APNAGKAAKPEPMPDVTVVPVEGGVMIQLTDKVDYGMFTIGSAKPDARVVQMLERIAQVI 262
Query: 77 EKHDCDFLIEGHADELGSR---NSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEM 132
+ + +I GH D + + L RA + V G+ R ++V Y
Sbjct: 263 ARQPGEVIISGHTDARPFKSATYDNWRLSSARAQMAYYMLVRGGLDEKRVLRVEGYADRQ 322
Query: 133 PSVYGHDEDAYAKNRRAIVFLK 154
P A+NRR +F+K
Sbjct: 323 PKNPNDPNA--AENRRIDIFIK 342
>gi|256828444|ref|YP_003157172.1| OmpA/MotB domain-containing protein [Desulfomicrobium baculatum DSM
4028]
gi|256577620|gb|ACU88756.1| OmpA/MotB domain protein [Desulfomicrobium baculatum DSM 4028]
Length = 198
Score = 54.8 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 1/104 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
++F+ + V + ++ D I GH+D +G R + L L RA
Sbjct: 95 LYFEFGRSELTAESKPVPPMIIEAITRRNSRDVRINGHSDTIGQREDNARLSLERAEGAR 154
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ + GI S M+V S+G+ + D+ +NRR V ++
Sbjct: 155 DILIKEGIDPSIMQVFSHGEGNLLIPTADDTPEPRNRRVEVLVR 198
>gi|330892287|gb|EGH24948.1| OmpA domain-containing protein [Pseudomonas syringae pv. mori str.
301020]
Length = 830
Score = 54.8 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 49/130 (37%), Gaps = 12/130 (9%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSI---RPADIQVLSNLGSW--LEKHDCDFLIEGHADE 91
SL+ + ++ F + LS + + +I GHAD+
Sbjct: 698 TQSLKAIETITLESDTLFAFGRADFQSLKTEGQNQLSAIAGKLLSTPNIGKIVIAGHADQ 757
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK------ 145
LG S++ + +RA + Y V +G+ A + G E P V + A+
Sbjct: 758 LGDPQSNMQVSRQRAQTIKTYLVGKGVPAELVDAVGEGSEKPLVKCDMQQPRAQLIQCLE 817
Query: 146 -NRRAIVFLK 154
NRR + ++
Sbjct: 818 PNRRVEIEVR 827
>gi|298484732|ref|ZP_07002834.1| OmpA domain protein [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|298160765|gb|EFI01784.1| OmpA domain protein [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
Length = 830
Score = 54.8 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 49/130 (37%), Gaps = 12/130 (9%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSI---RPADIQVLSNLGSW--LEKHDCDFLIEGHADE 91
SL+ + ++ F + LS + + +I GHAD+
Sbjct: 698 TQSLKAIETITLESDTLFAFGRADFQSLKTEGQNQLSAIAGKLLSTPNIGKIVIAGHADQ 757
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK------ 145
LG S++ + +RA + Y V +G+ A + G E P V + A+
Sbjct: 758 LGDPQSNMQVSRQRAQTIKTYLVGKGVPAELVDAVGEGSEKPLVKCDMQQPRAQLIQCLE 817
Query: 146 -NRRAIVFLK 154
NRR + ++
Sbjct: 818 PNRRVEIEVR 827
>gi|307719340|ref|YP_003874872.1| OmpA family protein [Spirochaeta thermophila DSM 6192]
gi|306533065|gb|ADN02599.1| OmpA family protein [Spirochaeta thermophila DSM 6192]
Length = 826
Score = 54.8 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 25/60 (41%)
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
L RA AV ++RG+ SR+ + YG P V D NRR LK N
Sbjct: 767 PLSRARAEAVRKALISRGVDPSRLSIVGYGGSRPIVPFSDLKKRWVNRRVEFLLKEKSGN 826
>gi|302036309|ref|YP_003796631.1| hypothetical protein NIDE0942 [Candidatus Nitrospira defluvii]
gi|300604373|emb|CBK40705.1| exported protein of unknown function, OmpA family [Candidatus
Nitrospira defluvii]
Length = 273
Score = 54.8 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 62/136 (45%), Gaps = 1/136 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-K 78
D+ S P T ++ + L + + + D + F+ + L +L+ +
Sbjct: 76 STDHAPVSASIPTTHVDTAPLAIRSTDILHDDIHFEIGRKGLTDDGKAALQRHAEFLKSE 135
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
D L++G+ D+ GSR+ + LG++RA V + +A G+ S ++ S G+E +
Sbjct: 136 RDWGILLQGYTDQQGSRSFNKILGMKRAETVKQHLMALGVPESSIRTVSLGEEGALCIDN 195
Query: 139 DEDAYAKNRRAIVFLK 154
+ NRR V ++
Sbjct: 196 SDVCRRMNRRVHVEMR 211
>gi|187921498|ref|YP_001890530.1| OmpA/MotB domain-containing protein [Burkholderia phytofirmans
PsJN]
gi|187719936|gb|ACD21159.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
Length = 371
Score = 54.8 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 37/148 (25%), Positives = 57/148 (38%), Gaps = 10/148 (6%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK-- 78
L+ P E Q+ + F + PA L L L++
Sbjct: 205 TAALEACTPPPTAAKVEPLPQKVTLQADATFKFDRGDLAGMLPAGKAKLDELIRSLKQAD 264
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
I+G+ D LGS + + L +RA V Y + G+S + +GKE P V +
Sbjct: 265 DVTGISIDGYTDRLGSDSYNRQLSAKRAETVKRYLQSGGVSPV-ISTRGHGKEDPVVQCN 323
Query: 139 D------EDAYAKNRRAIV-FLKGCRAN 159
D A NRR + F++G RA+
Sbjct: 324 DHNRAALIACLAPNRRVELDFVRGGRAS 351
>gi|257483657|ref|ZP_05637698.1| OmpA domain-containing protein [Pseudomonas syringae pv. tabaci
ATCC 11528]
gi|331012188|gb|EGH92244.1| OmpA domain-containing protein [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 830
Score = 54.8 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 49/130 (37%), Gaps = 12/130 (9%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSI---RPADIQVLSNLGSW--LEKHDCDFLIEGHADE 91
SL+ + ++ F + LS + + +I GHAD+
Sbjct: 698 TQSLKAIETITLESDTLFAFGRADFQSLKTEGQNQLSAIAGKLLSTPNIGKIVIAGHADQ 757
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK------ 145
LG S++ + +RA + Y V +G+ A + G E P V + A+
Sbjct: 758 LGDPQSNMQVSKQRAQTIKTYLVGKGVPAELVDAVGEGSEKPLVKCDMQQPRAQLIQCLE 817
Query: 146 -NRRAIVFLK 154
NRR + ++
Sbjct: 818 PNRRVEIEVR 827
>gi|117618219|ref|YP_855821.1| major outer membrane protein OmpAII [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117559626|gb|ABK36574.1| major outer membrane protein OmpAII [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 333
Score = 54.8 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 12/126 (9%)
Query: 47 SVGDSVFFDTSSYSIRPA---DIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F +++P + L ++ D ++ G+ D +GS ++ L
Sbjct: 207 ALSSDVLFAFGKSTLKPEGVAALNTLYQQIVDVQPKDGSAVVVGYTDRIGSDAYNLKLSE 266
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS---------VYGHDEDAYAKNRRAIVFLK 154
RA V ++ V +G+ A ++ + G+ P A +RR V +
Sbjct: 267 ARARTVADFLVGKGLPAGKVAIEGRGEANPVTGTQCNGIKAKAQLISCLAPDRRVEVRVT 326
Query: 155 GCRANT 160
G + T
Sbjct: 327 GVQQVT 332
>gi|190895276|ref|YP_001985569.1| hypothetical protein RHECIAT_PC0000949 [Rhizobium etli CIAT 652]
gi|190700937|gb|ACE95019.1| hypothetical conserved membrane protein [Rhizobium etli CIAT 652]
gi|327193548|gb|EGE60440.1| hypothetical conserved membrane protein [Rhizobium etli CNPAF512]
Length = 441
Score = 54.8 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/127 (15%), Positives = 47/127 (37%), Gaps = 8/127 (6%)
Query: 36 NESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF---LIEGHADEL 92
NE++ F ++ + +++++ + L+++ I GH D +
Sbjct: 312 NENASSVTLLLQSSTPELFQSARPELTKGFEPLVASIATVLKQNAELIGGITITGHTDNV 371
Query: 93 G-----SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+++ L RA + + A G+ A ++K P + A NR
Sbjct: 372 PLQASNPLSNNQRLSEARAATIASLLAASGVPAGQLKSQGRAATEPLAGNDSREGRAANR 431
Query: 148 RAIVFLK 154
R + ++
Sbjct: 432 RIEILIQ 438
>gi|78484731|ref|YP_390656.1| OmpA/MotB [Thiomicrospira crunogena XCL-2]
gi|78363017|gb|ABB40982.1| OmpA/MotB [Thiomicrospira crunogena XCL-2]
Length = 248
Score = 54.8 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 42/120 (35%), Gaps = 4/120 (3%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS--- 94
+ ++ FF++ +I + L LG L D + I G+ D +
Sbjct: 104 EDTPDYTKITLRSDSFFESGRATITDKTREQLEQLGETLAGRDQEISITGYTDSIPIENL 163
Query: 95 -RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L RA V F+ G+ + + ++ + NRR I+ +
Sbjct: 164 QFPSNWELSAARAATVARTFIYMGVDKNLVTISGKADNDAVAPNATAYGRSLNRRVIILV 223
>gi|99080027|ref|YP_612181.1| OmpA/MotB [Ruegeria sp. TM1040]
gi|99036307|gb|ABF62919.1| OmpA/MotB [Ruegeria sp. TM1040]
Length = 192
Score = 54.8 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FF T+ ++ A + L + F++ GH D S ++AL RRA AV
Sbjct: 91 FFPTNGSTVNAAGRKRLQEWFQSVMPGTRSFVVAGHTDSRASDEYNMALSQRRADAVAQI 150
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
R + A V +YG+ P V A+NRR +
Sbjct: 151 --GRSVGARIKDVRAYGERSPRVPNRGAANLAQNRRVEI 187
>gi|114561619|ref|YP_749132.1| OmpA/MotB domain-containing protein [Shewanella frigidimarina NCIMB
400]
gi|114332912|gb|ABI70294.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400]
Length = 200
Score = 54.8 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 67/179 (37%), Gaps = 26/179 (14%)
Query: 1 MQYSTIFIIL--SAITM-----MSISGIDNLDTKISSPDTV----------LNESSLQEQ 43
M+Y I + L + ++ + S N D S D V L +++
Sbjct: 1 MKYLIILLALITTGCSVNDIVESNASTQQNFDLADSDRDGVIMARERCASTLIGAAVDNY 60
Query: 44 FSSSVGDS-------VFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSR 95
S+ D + F +S I P + + + + + IEGH + GS
Sbjct: 61 GCGSIKDINERQDLKILFSNNSVVIEPQYYNQIERVANVMTTYPTTKVTIEGHTSKRGSY 120
Query: 96 NSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++AL +RA AV GI SR+ T Y + P +A +NRR + +
Sbjct: 121 ELNLALSQKRAKAVIEVLENTFGIDPSRLNATGYSFDRPIDNSGTPEAEERNRRVVAEV 179
>gi|313203341|ref|YP_004041998.1| ompa/motb domain protein [Paludibacter propionicigenes WB4]
gi|312442657|gb|ADQ79013.1| OmpA/MotB domain protein [Paludibacter propionicigenes WB4]
Length = 662
Score = 54.8 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 35/177 (19%), Positives = 70/177 (39%), Gaps = 33/177 (18%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG-----DSVFFDTSSYSIRPA 64
L+ + +S G N +T +S+ V +++ + S++ +++F+++ + + PA
Sbjct: 478 LNCVVFVSARGYLNQNTSLSTQGLVESKTFNVDFKLSAISKPIQIENIFYESGKWELTPA 537
Query: 65 DIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
L L + + I + D +GS + AL +RA +V +Y +++ I+ R+
Sbjct: 538 SENGLQVLVKLLNDNPNITIEISANTDLVGSNADNKALSTKRAKSVVDYLISKKIAPDRL 597
Query: 124 KVTSYGKEMPSV---------------------------YGHDEDAYAKNRRAIVFL 153
YG+E P V E A NRR +
Sbjct: 598 TSVGYGEEKPVVVDAAMAKKYPFLKENDVLDEAYVLKLTPAQQEVANQINRRTEFRV 654
>gi|237802142|ref|ZP_04590603.1| OmpA domain-containing protein [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331024999|gb|EGI05055.1| OmpA domain-containing protein [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 830
Score = 54.8 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 49/130 (37%), Gaps = 12/130 (9%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSI---RPADIQVLSNLGSW--LEKHDCDFLIEGHADE 91
SL+ + ++ F + LS + + +I GHAD+
Sbjct: 698 TQSLKAIETITLESDTLFAFGRADFQSLKTEGQNQLSAIAGKLLSTPNIGKIVIAGHADQ 757
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK------ 145
LG S++ + +RA + Y V +G+ A + G E P V + A+
Sbjct: 758 LGDPQSNMQVSKQRAQTIKTYLVGKGVPAELVDAVGEGSEKPLVKCDMQQPRAQLIQCLE 817
Query: 146 -NRRAIVFLK 154
NRR + ++
Sbjct: 818 PNRRVEIEVR 827
>gi|15602451|ref|NP_245523.1| Plp4 [Pasteurella multocida subsp. multocida str. Pm70]
gi|12720855|gb|AAK02670.1| Plp4 [Pasteurella multocida subsp. multocida str. Pm70]
Length = 272
Score = 54.8 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 47/119 (39%), Gaps = 8/119 (6%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGL 103
+ S+ FD + S+ +V+ ++ + L+ D + G D LGS ++ L
Sbjct: 133 AFSLSGDFLFDFNKDSLTAKGKEVVDSVATQLKASDAKEVKVAGFTDRLGSEAYNLKLSQ 192
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK------NRRAIVFLKGC 156
RRA V + +G++A + YGK D A NRR + G
Sbjct: 193 RRADRVKARLIEQGVAA-NIHAVGYGKAQQVKACDDVQGAALRDCLRPNRRVEITASGT 250
>gi|110678301|ref|YP_681308.1| OmpA family domain-containing protein [Roseobacter denitrificans
OCh 114]
gi|109454417|gb|ABG30622.1| OmpA family domain protein [Roseobacter denitrificans OCh 114]
Length = 319
Score = 54.8 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSV 135
D + GH D G+ ++I+L RA +V + + G+S ++ G P
Sbjct: 238 RSQDMRVALVGHTDATGTLAANISLSRARARSVRSRLIETYGVSPDQVDAEGMGYLAPIA 297
Query: 136 YGHDEDAYAKNRRAIVFLKGCR 157
E+ NRR V L +
Sbjct: 298 SNLTEEGRRLNRRVEVVLLNTQ 319
>gi|146278796|ref|YP_001168955.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
17025]
gi|145557037|gb|ABP71650.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17025]
Length = 499
Score = 54.8 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 33/93 (35%)
Query: 62 RPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS 121
+ L L D ++ G +D GS ++++L RA V +
Sbjct: 399 SREALTDLVKLVEVGRFRDQQLMLVGFSDGRGSAEANLSLSRDRAATVARALQEAAPDLA 458
Query: 122 RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
V +G+ +P NRR ++L+
Sbjct: 459 PPLVEGFGEALPLACDTTVAGRRMNRRVELWLR 491
>gi|329755862|gb|AEC04328.1| outer membrane protein A [Pasteurella multocida]
Length = 348
Score = 54.8 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 49/121 (40%), Gaps = 10/121 (8%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRR 105
++ V F ++PA VL + + + + G+ D LGS ++ L RR
Sbjct: 228 TLNTDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSASVAVAGYTDRLGSDAYNLKLSQRR 287
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLKGC 156
A V NY A+G++ + + T +G+ P A +R + +KG
Sbjct: 288 ADTVANYLEAKGVAQNAISATGHGEANPVTGNKCDSVKGRKALIACLADDRPVEIAVKGN 347
Query: 157 R 157
+
Sbjct: 348 K 348
>gi|299773233|gb|ADJ38691.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 368
Score = 54.8 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 51/126 (40%), Gaps = 15/126 (11%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + G+ D +G +++ L
Sbjct: 239 AFSSDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 298
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRA---IV 151
+RA V NY V++G++ + + YG+ P + A +RR +
Sbjct: 299 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVNASEI 358
Query: 152 FLKGCR 157
++G +
Sbjct: 359 QVQGSK 364
>gi|170722232|ref|YP_001749920.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619]
gi|169760235|gb|ACA73551.1| OmpA/MotB domain protein [Pseudomonas putida W619]
Length = 435
Score = 54.8 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 43/115 (37%), Gaps = 5/115 (4%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH---DCDFLIEGHADELGSRNSS 98
Q + + + F S S+ ++ + +L + ++ G D + +
Sbjct: 322 AQKAQRLSVNFRFQEGSASLDNKALRDTKRVADYLRQAGKLQNKAVLVGFGDPKETPGRA 381
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA AV G+ ++VT G E+P E +NRR V++
Sbjct: 382 ALLSRLRAQAVRRELARDGVEV--LEVTGMGDELPVAGNELEQGRLRNRRVEVWV 434
>gi|332664693|ref|YP_004447481.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332333507|gb|AEE50608.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 662
Score = 54.8 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 61/130 (46%), Gaps = 9/130 (6%)
Query: 33 TVLNESSLQEQFSSS---VGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGH 88
+NE +++ + V +++++D + +IR D + L L + + + + H
Sbjct: 517 APINEEVMRKPLAEGTVIVMENIYYDFNKAAIRTTDARDLEALTRLMLKYPTMEVELGAH 576
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD-----EDAY 143
D G+ + L +RRA A + V +G++A+R++ T +G+ + + E +
Sbjct: 577 TDSRGTTEYNQQLSVRRAEAAKEFLVRKGVAANRIRTTGFGETQIRNHCKEGIECAEKEH 636
Query: 144 AKNRRAIVFL 153
NRR V +
Sbjct: 637 QFNRRTEVKV 646
>gi|330874387|gb|EGH08536.1| OmpA domain-containing protein [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 830
Score = 54.8 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 49/130 (37%), Gaps = 12/130 (9%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSI---RPADIQVLSNLGSW--LEKHDCDFLIEGHADE 91
SL+ + ++ F + LS + + +I GHAD+
Sbjct: 698 TQSLKAIETITLESDTLFAFGRADFQSLKVEGQNQLSAIAGKLLSTPNIGKIVIAGHADQ 757
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK------ 145
LG S++ + +RA + Y V +G+ + + G E P V + A+
Sbjct: 758 LGDPQSNMQVSKQRAQTIKTYLVGKGVPSELVDAVGEGSEKPLVKCDMQQPRAQLIQCLE 817
Query: 146 -NRRAIVFLK 154
NRR + ++
Sbjct: 818 PNRRVEIEVR 827
>gi|54302262|ref|YP_132255.1| putative outer membrane protein [Photobacterium profundum SS9]
gi|46915683|emb|CAG22455.1| putative outer membrane protein [Photobacterium profundum SS9]
Length = 196
Score = 54.8 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAV 109
V F S +I A + + + +LE + ++G+A +G+ +I L RRA V
Sbjct: 74 RVLFANDSAAIPEAFLSEIQRMADFLEIYPETYIELKGYASPVGNAEYNIGLSKRRATKV 133
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
+A G++ R+K +G P E +RR + + G + +
Sbjct: 134 REQLIAEGVAPQRIKTIGFGDAEPIAAESSEATNTLSRRVVARVIGSKGS 183
>gi|320326605|gb|EFW82655.1| OmpA domain-containing protein [Pseudomonas syringae pv. glycinea
str. B076]
gi|320331074|gb|EFW87046.1| OmpA domain-containing protein [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 830
Score = 54.8 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 49/130 (37%), Gaps = 12/130 (9%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSI---RPADIQVLSNLGSW--LEKHDCDFLIEGHADE 91
SL+ + ++ F + LS + + +I GHAD+
Sbjct: 698 TQSLKAIETITLESDTLFAFGRADFQSLKTEGQNQLSAIAGKLLSTPNIGKIMIAGHADQ 757
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK------ 145
LG S++ + +RA + Y V +G+ A + G E P V + A+
Sbjct: 758 LGDPQSNMQVSKQRAQTIKTYLVGKGVPAELVDAVGEGSEKPLVKCDMQQPRAQLIQCLE 817
Query: 146 -NRRAIVFLK 154
NRR + ++
Sbjct: 818 PNRRVEIEVR 827
>gi|149371333|ref|ZP_01890819.1| outer membrane protein A [unidentified eubacterium SCB49]
gi|149355471|gb|EDM44030.1| outer membrane protein A [unidentified eubacterium SCB49]
Length = 560
Score = 54.8 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/146 (15%), Positives = 50/146 (34%), Gaps = 7/146 (4%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
++ + + + + + ++ + ++ S ++ ++
Sbjct: 412 IVPATTTTVTKEVLQTKGGLTTWTEVECALVEYQALPINWNLGSATLTAQAKNIIDTRLM 471
Query: 75 WL--EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
+ + I H D G + ++ L RRA AV Y ++GI+ S + +G+
Sbjct: 472 PVLAQNPGVKLEIASHTDSRGGKAANQDLSERRAQAVAVYLQSKGINNSLLVANGFGETR 531
Query: 133 PSVYGH-----DEDAYAKNRRAIVFL 153
E +A NRR L
Sbjct: 532 LLNRCADGVSCTEKEHAANRRTEFRL 557
>gi|104780481|ref|YP_606979.1| OmpA family outer membrane protein [Pseudomonas entomophila L48]
gi|95109468|emb|CAK14169.1| putative outer membrane protein, OmpA family [Pseudomonas
entomophila L48]
Length = 322
Score = 54.8 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 32/71 (45%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
LI GHAD G+ ++ L L RA +V F G+ R+ + G MP +
Sbjct: 161 VLILGHADSSGATAANQKLSLERAASVSAIFRLSGLQRDRLMLKGMGSVMPRAANDSAEG 220
Query: 143 YAKNRRAIVFL 153
A NRR + L
Sbjct: 221 RALNRRVEMLL 231
>gi|281420329|ref|ZP_06251328.1| lipoprotein PG3 [Prevotella copri DSM 18205]
gi|281405631|gb|EFB36311.1| lipoprotein PG3 [Prevotella copri DSM 18205]
Length = 248
Score = 54.4 bits (129), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 64/139 (46%), Gaps = 4/139 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-D 80
+ ++ + +++ + + F T+ ++ + L+ L+ + D
Sbjct: 101 AEAEQVKNAQVETVTDANGLSAVKVTFASGILFPTNGSTLSSSAKTDLAQFAGVLKNNTD 160
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHD 139
C+ I+G+ D G+ ++ L +RA AV+NY + G+++ ++K V +G P V
Sbjct: 161 CEVSIQGYTDATGNDGINLPLSQKRAEAVYNYLASCGVTSRQVKNVQGFGSANPVV-NTT 219
Query: 140 EDAYAKNRRAIVFLKGCRA 158
A+NRR V++ +A
Sbjct: 220 AAC-AQNRRVEVYMYASQA 237
>gi|225620337|ref|YP_002721594.1| putative flagellar motor protein [Brachyspira hyodysenteriae WA1]
gi|225215156|gb|ACN83890.1| putative flagellar motor protein [Brachyspira hyodysenteriae WA1]
Length = 266
Score = 54.4 bits (129), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 44/131 (33%), Gaps = 15/131 (11%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYS--IRPADIQVLSNLGSWLEKHDCDFLIEGHADEL--- 92
+ F S+G +F+++S + +++ L S L D IEGH D
Sbjct: 125 EEDERGFIISLGADQYFESASTNLVDNQNNVETFIKLASVLSGLPNDVRIEGHTDSGSII 184
Query: 93 ----------GSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
+ S A + +F A + ++ + Y P D
Sbjct: 185 PGSITEQKFGNNWGLSSARAMVILEKIFENDQAGKLDRNKYSIAGYADTRPVASNDLPDG 244
Query: 143 YAKNRRAIVFL 153
A NRR + +
Sbjct: 245 RALNRRVDIVV 255
>gi|126736760|ref|ZP_01752498.1| OmpA/MotB [Roseobacter sp. CCS2]
gi|126713731|gb|EBA10604.1| OmpA/MotB [Roseobacter sp. CCS2]
Length = 592
Score = 54.4 bits (129), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 47/130 (36%), Gaps = 6/130 (4%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE---KHDCDFLIEG 87
D V + + + S+ F T + I + + S + + L+ G
Sbjct: 460 ADDVTRTYLAEIANAERLSTSLRFLTGQAVLDTKAIADIKRISSIVRSAEYEGYEVLVFG 519
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGI---SASRMKVTSYGKEMPSVYGHDEDAYA 144
D +G+ N++IAL RRA V + +A + + G P
Sbjct: 520 FTDSVGTINNNIALAERRAQTVKDVLIAENAGILDDETVSIFGMGPIAPVNCNDTSVGRD 579
Query: 145 KNRRAIVFLK 154
NRR V+++
Sbjct: 580 LNRRVEVWIR 589
>gi|330947103|gb|EGH47879.1| OmpA/MotB [Pseudomonas syringae pv. pisi str. 1704B]
Length = 156
Score = 54.4 bits (129), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 29/69 (42%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
LI GHAD GS ++ + RA +V F G+ +R+ G MP
Sbjct: 26 VLILGHADTSGSTEANQKISQERAQSVAAIFRLSGLERNRLSQRGMGAVMPRAANDSLQG 85
Query: 143 YAKNRRAIV 151
A NRR +
Sbjct: 86 RALNRRVEI 94
>gi|161621187|ref|YP_001595073.1| flagellar motor protein MotB [Brucella canis ATCC 23365]
gi|254702390|ref|ZP_05164218.1| flagellar motor protein MotB [Brucella suis bv. 3 str. 686]
gi|260568709|ref|ZP_05839178.1| OmpA/MotB domain-containing protein [Brucella suis bv. 4 str. 40]
gi|261752951|ref|ZP_05996660.1| flagellar motor protein MotB [Brucella suis bv. 3 str. 686]
gi|161337998|gb|ABX64302.1| Protein mbhA [Brucella canis ATCC 23365]
gi|260155374|gb|EEW90455.1| OmpA/MotB domain-containing protein [Brucella suis bv. 4 str. 40]
gi|261742704|gb|EEY30630.1| flagellar motor protein MotB [Brucella suis bv. 3 str. 686]
Length = 366
Score = 54.4 bits (129), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 47/142 (33%), Gaps = 9/142 (6%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSNLGSWL 76
+ P + ++ + D V F S +Q+L + +
Sbjct: 224 APNAGKAAKPEPMPDVTVVPVEGGVMIQLTDKVDYGMFTIGSAKPDARVVQMLERIAQVI 283
Query: 77 EKHDCDFLIEGHADELGSR---NSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEM 132
+ + +I GH D + + L RA + V G+ R ++V Y
Sbjct: 284 ARQPGEVIISGHTDARPFKSATYDNWRLSSTRAQMAYYMLVRGGLDEKRVLRVEGYADRQ 343
Query: 133 PSVYGHDEDAYAKNRRAIVFLK 154
P A+NRR +F+K
Sbjct: 344 PKNPNDPNA--AENRRIDIFIK 363
>gi|332292958|ref|YP_004431567.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332171044|gb|AEE20299.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 640
Score = 54.4 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 51/122 (41%), Gaps = 8/122 (6%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADELGSRNSS 98
+ + + F+++ Y+I Q L + + ++ + IE H D+ G + +
Sbjct: 516 TDGEIEKIKINPINFESNRYAINIFAAQQLQRIIDIMNEYPALIIKIESHTDQRGGASYN 575
Query: 99 IALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGH------DEDAYAKNRRAIV 151
L RA + +Y + GI++SR+ +G+ P E Y +NRR+
Sbjct: 576 QTLSENRATSTRDYLIKNGITSSRIESAKGFGESRPIHICDEADDSCTEVQYLENRRSDF 635
Query: 152 FL 153
+
Sbjct: 636 IV 637
>gi|126441843|ref|YP_001058607.1| OmpA family outer membrane protein [Burkholderia pseudomallei 668]
gi|126221336|gb|ABN84842.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 668]
Length = 236
Score = 54.4 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 48/146 (32%), Gaps = 7/146 (4%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
T+ G S + + ++ F + S+ Q LS L
Sbjct: 84 TLAFQCGEPAQPVAQQSQPAPAAAPAAEPIRLNADAMFAFDRADAASMTEQGRQQLSQLA 143
Query: 74 SW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
++H I G+ D LGS + L RA V +Y +A G+ A + G
Sbjct: 144 QRLTDRHAQTVSIVGYTDRLGSDAYNRQLSQARAKTVGDYLIAAGVPADSVHAEGRGASD 203
Query: 133 PSVYGHDED------AYAKNRRAIVF 152
P V + A NRR V
Sbjct: 204 PLVQCDQRERAALIACLAPNRRVEVV 229
>gi|254467600|ref|ZP_05081009.1| OmpA/MotB domain protein [Rhodobacterales bacterium Y4I]
gi|206684348|gb|EDZ44832.1| OmpA/MotB domain protein [Rhodobacterales bacterium Y4I]
Length = 191
Score = 54.4 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 41/111 (36%), Gaps = 4/111 (3%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIAL 101
+ + + FD S ++R L+N+ ++ I GH D GS + + L
Sbjct: 79 DQQTQINVQISFDFDSAALRADQAPKLANMCESMKLMGGTVFQIIGHTDSSGSASYNERL 138
Query: 102 GLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
L RA V + ++ +K G+ P D +NRR
Sbjct: 139 SLLRAQEVRRHLISSCGVPEDMLKAIGMGETAPF--NQDNPRADENRRVEF 187
>gi|167855462|ref|ZP_02478226.1| lipoprotein Plp4 [Haemophilus parasuis 29755]
gi|167853391|gb|EDS24641.1| lipoprotein Plp4 [Haemophilus parasuis 29755]
Length = 281
Score = 54.4 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 40/107 (37%), Gaps = 8/107 (7%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FD + +V+ N+ L+ + G+AD LGS ++ L RRA V
Sbjct: 143 LFDFDKDILTTKGREVVDNVAEQLKSSGAEKVKLVGYADRLGSEEYNLDLSQRRANMVKA 202
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK------NRRAIVF 152
V +GI ++ YGK E A NRR +
Sbjct: 203 RLVEQGIKVP-IEAVGYGKANQVKACDGESGQALRDCLRPNRRVEIT 248
>gi|17988498|ref|NP_541131.1| flagellar motor protein MotB [Brucella melitensis bv. 1 str. 16M]
gi|256042871|ref|ZP_05445817.1| flagellar motor protein MotB [Brucella melitensis bv. 1 str. Rev.1]
gi|260564108|ref|ZP_05834593.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 1 str.
16M]
gi|265989306|ref|ZP_06101863.1| flagellar motor protein MotB [Brucella melitensis bv. 1 str. Rev.1]
gi|17984289|gb|AAL53395.1| chemotaxis motb protein [Brucella melitensis bv. 1 str. 16M]
gi|260151751|gb|EEW86844.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 1 str.
16M]
gi|262999975|gb|EEZ12665.1| flagellar motor protein MotB [Brucella melitensis bv. 1 str. Rev.1]
Length = 366
Score = 54.4 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 49/140 (35%), Gaps = 7/140 (5%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+G + V E + Q + V D F S +Q+L + + +
Sbjct: 227 AGKAAKPEPMPDVTVVPVEGGVMSQLTDKV-DYGMFTIGSAKPDARVVQMLERIAQVIAR 285
Query: 79 HDCDFLIEGHADELGSR---NSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPS 134
+ +I GH D + + L RA + V G+ R ++V Y P
Sbjct: 286 QPGEVIISGHTDARPFKSATYDNWRLSSARAQMAYYMLVRGGLDEKRVLRVEGYADRQPK 345
Query: 135 VYGHDEDAYAKNRRAIVFLK 154
A+NRR +F+K
Sbjct: 346 NPNDPNA--AENRRIDIFIK 363
>gi|86145932|ref|ZP_01064260.1| putative outer membrane protein [Vibrio sp. MED222]
gi|85836387|gb|EAQ54517.1| putative outer membrane protein [Vibrio sp. MED222]
Length = 204
Score = 54.4 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 51/111 (45%), Gaps = 6/111 (5%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVF 110
+ F S I+P + + + ++L++++ ++G+A ++G+ ++ L +RA V
Sbjct: 84 ILFANDSAEIKPVFLSQIRQMAAFLKRYENTSIQLQGYASKVGNAEHNLKLSEKRADNVR 143
Query: 111 NYFVARGISASRMKVTSYGK--EMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
++ GI SR YG E +A NR+ + + G + N
Sbjct: 144 RALISNGIPPSRAYTVGYGDVGFR---DNDTETNHALNRKVVASVVGFKGN 191
>gi|228018095|gb|ACP52726.1| fibronectin-binding protein [Campylobacter coli]
Length = 211
Score = 54.4 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 54/144 (37%), Gaps = 6/144 (4%)
Query: 4 STIFIILSAITMMSISGIDNLDTKISSPDTVLNESSL-----QEQFSSSVGDSVFFDTSS 58
ST+ I + + + DT+ + E + ++ F
Sbjct: 68 STLGISFGFGSKKEKAVEEVADTRPAPQAKCPVEPREGALLDENGCEKTISLEGHFGFDK 127
Query: 59 YSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG 117
+I P + + + E D ++EGH D +GSR + L RRA +V G
Sbjct: 128 TTINPTFQEKIKEIAKVLDENERYDTILEGHTDNIGSRAYNQKLSERRANSVAKELEKFG 187
Query: 118 ISASRMKVTSYGKEMPSVYGHDED 141
+ SR++ YG++ P ++
Sbjct: 188 VDKSRIQTVGYGQDKPRSSNDTKE 211
>gi|170721680|ref|YP_001749368.1| OmpA/MotB domain-containing protein [Pseudomonas putida W619]
gi|169759683|gb|ACA72999.1| OmpA/MotB domain protein [Pseudomonas putida W619]
Length = 831
Score = 54.4 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 45/112 (40%), Gaps = 9/112 (8%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSW--LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
F S++ LS + S + +I GHAD+LG ++ + +RA +
Sbjct: 718 FARADFQSLKSEGQNQLSAIASKLLNTPNIGKIIISGHADQLGDAQGNLQVSRQRAQTIR 777
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK-------NRRAIVFLKG 155
Y V +G+ A + G P V + A+ NRR + ++G
Sbjct: 778 TYLVGKGVPAELVSAQGEGSRKPLVNCDMQQPRAQLIKCLEPNRRVEIEVRG 829
>gi|262039316|ref|ZP_06012632.1| outer membrane porin F [Leptotrichia goodfellowii F0264]
gi|261746660|gb|EEY34183.1| outer membrane porin F [Leptotrichia goodfellowii F0264]
Length = 104
Score = 54.4 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+E S+ FD +++P +L NL ++E +D D I GH D G+
Sbjct: 1 TKVKGPKEVTVVLDERSLLFDFDKSNVKPQYYGILQNLKEYIEVNDYDVTIIGHTDSKGT 60
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYG 137
++ LG+RRA +V + G+ ASR+ V S G+E P
Sbjct: 61 NEYNMKLGMRRAESVKAKMIEFGVPASRIVGVESRGEEEPVATN 104
>gi|13472165|ref|NP_103732.1| hypothetical protein mll2368 [Mesorhizobium loti MAFF303099]
gi|14022910|dbj|BAB49518.1| mll2368 [Mesorhizobium loti MAFF303099]
Length = 167
Score = 54.4 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 43/124 (34%), Gaps = 6/124 (4%)
Query: 34 VLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS---WLEKHDCDFLIEGHAD 90
E + + + + F S + L F++EGH D
Sbjct: 45 SKAEKTGSAAQKTGLDMMINFALDSAQLDQTARAELDEFAKALKDNRLSTFSFVVEGHTD 104
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + L RRA +V + A G+ + R++ GK P V + NRR
Sbjct: 105 ATGPDRYNQDLSQRRAQSVAAFLEANGVESVRLEAIGLGKSHPRVANPYD---PVNRRVE 161
Query: 151 VFLK 154
+ ++
Sbjct: 162 MRIR 165
>gi|327402922|ref|YP_004343760.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
16823]
gi|327318430|gb|AEA42922.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
Length = 321
Score = 54.4 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 48/130 (36%), Gaps = 11/130 (8%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHAD 90
+ L + S+ + F + S ++ + L +L + D + ++EGH D
Sbjct: 183 NKGLTVVEKNGKIYVSLEAKLLFASGSTTVEAEGKKALVDLAKVLENEKDLEIIVEGHTD 242
Query: 91 -----ELGSRNSSIALGLRRAYAVFNYFV-ARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
S+ L + R+ AV + ++ ++ G+ P D A
Sbjct: 243 TDKLASTAHPKSNWELSVLRSTAVVEIMIGNSKMNPMQLMAAGRGEYHPV----DAKDKA 298
Query: 145 KNRRAIVFLK 154
KNRR V +
Sbjct: 299 KNRRIEVIIS 308
>gi|313141840|ref|ZP_07804033.1| OmpA/MotB [Helicobacter canadensis MIT 98-5491]
gi|313130871|gb|EFR48488.1| OmpA/MotB [Helicobacter canadensis MIT 98-5491]
Length = 263
Score = 54.4 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 41/136 (30%), Gaps = 8/136 (5%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN---LGSWLEKHD 80
+ S + E +E F + FD +I AD + L
Sbjct: 87 KEDARVSLGPSVVEDDGKEGFILRFHGRLLFDEEKTAIENADEILFLKRLALILQKMPQT 146
Query: 81 CDFLIEGHADE-----LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
I G+AD S+ L RA V + ++ ++ G +
Sbjct: 147 MHLDIIGYADNVEGKPNLKYQDSLGLSALRASNVAKILIENQVNPQKITSLGGGATNFLL 206
Query: 136 YGHDEDAYAKNRRAIV 151
+ + A+NRR
Sbjct: 207 PNTNAENRAQNRRVEF 222
>gi|302035839|ref|YP_003796161.1| hypothetical protein NIDE0460 [Candidatus Nitrospira defluvii]
gi|300603903|emb|CBK40235.1| exported protein of unknown function, OmpA family [Candidatus
Nitrospira defluvii]
Length = 236
Score = 54.4 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 51 SVFFDTSSYSIRPADIQV-LSNLGSWLEKHDCDFL-IEGHADELGSRNSSIALGLRRAYA 108
VF+ YS+ D V L+ WL+++ L I GH DE G+ + ++ LG +RA A
Sbjct: 130 DVFYGYDRYSVSDNDGVVSLTTNADWLKENPKALLKISGHCDERGTHDYNLVLGEKRAKA 189
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
++ V G++A ++ + SYGK+ P HDE + +NRR
Sbjct: 190 AKSFLVDLGVNAKQVAIVSYGKDRPFCADHDEACHQQNRR 229
>gi|225686890|ref|YP_002734862.1| flagellar motor protein MotB [Brucella melitensis ATCC 23457]
gi|256261973|ref|ZP_05464505.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 2 str.
63/9]
gi|225642995|gb|ACO02908.1| Protein mbhA [Brucella melitensis ATCC 23457]
gi|263091457|gb|EEZ15993.1| OmpA/MotB domain-containing protein [Brucella melitensis bv. 2 str.
63/9]
gi|326411308|gb|ADZ68372.1| flagellar motor protein MotB [Brucella melitensis M28]
gi|326554597|gb|ADZ89236.1| flagellar motor protein MotB [Brucella melitensis M5-90]
Length = 366
Score = 54.4 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 49/140 (35%), Gaps = 7/140 (5%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+G + V E + Q + V D F S +Q+L + + +
Sbjct: 227 AGKAAKPEPMPDVTVVPVEGGVMSQLTDKV-DYGMFTIGSAKPDARVVQMLERIAQVIAR 285
Query: 79 HDCDFLIEGHADELGSR---NSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPS 134
+ +I GH D + + L RA + V G+ R ++V Y P
Sbjct: 286 QPGEVIISGHTDARPFKSATYDNWRLSSARAQMAYYMLVRGGLDEKRVLRVEGYADRQPK 345
Query: 135 VYGHDEDAYAKNRRAIVFLK 154
A+NRR +F+K
Sbjct: 346 NPNDPNA--AENRRIDIFIK 363
>gi|156977089|ref|YP_001447995.1| hypothetical protein VIBHAR_05874 [Vibrio harveyi ATCC BAA-1116]
gi|156528683|gb|ABU73768.1| hypothetical protein VIBHAR_05874 [Vibrio harveyi ATCC BAA-1116]
Length = 1211
Score = 54.4 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 46/119 (38%), Gaps = 10/119 (8%)
Query: 50 DSVFFDTSSYSIRPAD--IQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
+ FF+ SY + + ++ L + + +I GH +GS ++AL +RA
Sbjct: 263 NMTFFEFDSYQVTEKGSVHKRIAEQLQALISNPFEIVITGHTCNMGSEAYNLALSEKRAV 322
Query: 108 AVFNYFVARGISASR--------MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
+V + +R + Y +P + KNRR ++L R+
Sbjct: 323 SVKEAILDAMSPDARSVWSPLFKIVAKGYAVSLPGNTNRTIEERVKNRRVEIYLAFSRS 381
>gi|1332435|emb|CAA63037.1| outer membrane protein [Aeromonas salmonicida]
gi|1588799|prf||2209353B major outer membrane protein OmpAII
Length = 330
Score = 54.4 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 51/130 (39%), Gaps = 12/130 (9%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSI 99
S ++ V F +++P + L+ L + D ++ G+ D +GS ++
Sbjct: 200 DKSFALSSDVLFAFGKSTLKPEGVAALNTLYHQNVDVQPKDGSAVVVGYTDRIGSDAYNL 259
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS---------VYGHDEDAYAKNRRAI 150
L RA V ++ V +G+ A ++ + G+ P A +RR
Sbjct: 260 KLSEARARTVADFLVGKGLPAGKVAIEGRGEASPVTGTQCDGIKAKAQLIACLAPDRRVE 319
Query: 151 VFLKGCRANT 160
V + G + T
Sbjct: 320 VRVTGIQEVT 329
>gi|297538146|ref|YP_003673915.1| OmpA/MotB domain-containing protein [Methylotenera sp. 301]
gi|297257493|gb|ADI29338.1| OmpA/MotB domain protein [Methylotenera sp. 301]
Length = 378
Score = 54.4 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 43/115 (37%), Gaps = 8/115 (6%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD--CDFLIEGHADELGSRNSSIALGL 103
+V F ++ +L + + ++ + ++ GH D +GS + L
Sbjct: 254 VTVSAEKLFGFDKAKLQDGAKPILDDTVAKIKANPELKTVIVTGHTDRIGSTAYNQKLSE 313
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY------AKNRRAIVF 152
+RA V Y V++G+ A + G+ P A NRR ++
Sbjct: 314 KRASIVKEYLVSQGVDAGIITSVGKGESEPVEACKGVTGKKLISCLAPNRRVVIT 368
>gi|288918113|ref|ZP_06412470.1| OmpA/MotB domain protein [Frankia sp. EUN1f]
gi|288350495|gb|EFC84715.1| OmpA/MotB domain protein [Frankia sp. EUN1f]
Length = 186
Score = 54.4 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 60/148 (40%), Gaps = 8/148 (5%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNE----SSLQEQFSSSVGDSVFFDTSSYSIRPADI 66
+A + + + S D + + S+V FD S +RP
Sbjct: 43 AAASTFTPAPHATRVPPTVSADPLPPLSSFITQADGSRVSTVSADYLFDADSDVLRPEAA 102
Query: 67 QVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT 126
L+ + + +HD + G++D LGS ++ L RA AV Y ++ I A+ ++V
Sbjct: 103 TALAGIVPQIREHDGKVQVVGYSDGLGSTEHNLELSRERAVAVQTYLTSQDIPAAMLEVV 162
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ G+ + + + RR + L+
Sbjct: 163 AKGEA-GAADNVADASR---RRVEIVLR 186
>gi|332534695|ref|ZP_08410524.1| OmpA/MotB domain protein [Pseudoalteromonas haloplanktis ANT/505]
gi|332035845|gb|EGI72328.1| OmpA/MotB domain protein [Pseudoalteromonas haloplanktis ANT/505]
Length = 432
Score = 54.4 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 58/136 (42%), Gaps = 2/136 (1%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
D + S + L+ ++ +S++ + F S +R IQ +S L +L+++
Sbjct: 294 EQDTCPSTPLSTNVDLSGCTIYSASTSNIEIGIPFSADSSDVRSQYIQEISRLADFLKEN 353
Query: 80 DCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYG 137
I+GHA G R + L +RA+AV + + R+K YG + P V
Sbjct: 354 PTKQVEIQGHASLDGDRKYNRKLSEKRAFAVAEILIKQFDVEPKRVKSFGYGIDQPRVNE 413
Query: 138 HDEDAYAKNRRAIVFL 153
A A NRR +
Sbjct: 414 ISVRANAANRRIEAVI 429
>gi|294852974|ref|ZP_06793646.1| chemotaxis protein MotB [Brucella sp. NVSL 07-0026]
gi|294818629|gb|EFG35629.1| chemotaxis protein MotB [Brucella sp. NVSL 07-0026]
Length = 366
Score = 54.4 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 47/142 (33%), Gaps = 9/142 (6%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSNLGSWL 76
+ P + ++ + D V F S +Q+L + +
Sbjct: 224 APNAGKAAKPEPMPDVTVVPVEGGVMIQLTDKVDYGMFTIGSAKPDARVVQMLERIAQVI 283
Query: 77 EKHDCDFLIEGHADELGSR---NSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEM 132
+ + +I GH D + + L RA + V G+ R ++V Y
Sbjct: 284 ARQPGEVIISGHTDARPFKSATYDNWRLSSARAQMAYYMLVRGGLDEKRVLRVEGYADRQ 343
Query: 133 PSVYGHDEDAYAKNRRAIVFLK 154
P A+NRR +F+K
Sbjct: 344 PKNPNDPNA--AENRRIDIFIK 363
>gi|294786072|ref|ZP_06751357.1| outer membrane protein [Fusobacterium sp. 3_1_27]
gi|294486294|gb|EFG33659.1| outer membrane protein [Fusobacterium sp. 3_1_27]
Length = 70
Score = 54.4 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 104 RRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RRA +V + G+S R+ + + G+E P ++ A+NRR L
Sbjct: 1 RRAESVKAKLLEFGLSEDRIVGIEAMGEEQPIATNATKEGRAQNRRVEFKL 51
>gi|82703306|ref|YP_412872.1| OmpA/MotB [Nitrosospira multiformis ATCC 25196]
gi|82411371|gb|ABB75480.1| OmpA/MotB [Nitrosospira multiformis ATCC 25196]
Length = 225
Score = 54.4 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 49/128 (38%), Gaps = 13/128 (10%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIA 100
E S+ FD ++RP Q L + + + G+AD LGS +
Sbjct: 95 EPEKISLSADQLFDFDKANLRPEGKQTLDDLVAKLGGVKYDTIVAIGYADRLGSDAYNKK 154
Query: 101 LGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHD----------EDAYAKNRRA 149
L +RRA +V Y V +GI A R+ + G+ P G +RR
Sbjct: 155 LSMRRAESVKAYLVNEKGIPADRIFIDGKGEANPV-TGDTCKGNKKTKALIACLQPDRRV 213
Query: 150 IVFLKGCR 157
V + G +
Sbjct: 214 EVEVAGTK 221
>gi|127512720|ref|YP_001093917.1| OmpA/MotB domain-containing protein [Shewanella loihica PV-4]
gi|126638015|gb|ABO23658.1| OmpA/MotB domain protein [Shewanella loihica PV-4]
Length = 251
Score = 54.4 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGL 103
++G +V F T S ++ P L+ + + + G+AD G + + AL
Sbjct: 132 ELALGLNVQFKTGSSTVEPHFQSQLNEVADAMAISPQLKLDLTGYADRRGDSSYNQALSE 191
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+R V +Y V++G+ +R+ +YG P + +RR + L
Sbjct: 192 QRVAEVRSYLVSKGVDEARLDAKAYGASAPVKDEQSFENDFFDRRVTIKL 241
>gi|23500858|ref|NP_700298.1| flagellar motor protein MotB [Brucella suis 1330]
gi|163845462|ref|YP_001623117.1| flagellar motor protein MotB [Brucella suis ATCC 23445]
gi|225628433|ref|ZP_03786467.1| Protein mbhA [Brucella ceti str. Cudo]
gi|254711223|ref|ZP_05173034.1| flagellar motor protein MotB [Brucella pinnipedialis B2/94]
gi|254711824|ref|ZP_05173635.1| flagellar motor protein MotB [Brucella ceti M644/93/1]
gi|254714893|ref|ZP_05176704.1| flagellar motor protein MotB [Brucella ceti M13/05/1]
gi|256015903|ref|YP_003105912.1| flagellar motor protein [Brucella microti CCM 4915]
gi|256030148|ref|ZP_05443762.1| flagellar motor protein MotB [Brucella pinnipedialis M292/94/1]
gi|256059799|ref|ZP_05449994.1| flagellar motor protein MotB [Brucella neotomae 5K33]
gi|256158327|ref|ZP_05456231.1| flagellar motor protein MotB [Brucella ceti M490/95/1]
gi|256252739|ref|ZP_05458275.1| flagellar motor protein MotB [Brucella ceti B1/94]
gi|260166800|ref|ZP_05753611.1| flagellar motor protein MotB [Brucella sp. F5/99]
gi|261216582|ref|ZP_05930863.1| flagellar motor protein MotB [Brucella ceti M13/05/1]
gi|261219818|ref|ZP_05934099.1| flagellar motor protein MotB [Brucella ceti B1/94]
gi|261318815|ref|ZP_05958012.1| flagellar motor protein MotB [Brucella pinnipedialis B2/94]
gi|261319452|ref|ZP_05958649.1| flagellar motor protein MotB [Brucella ceti M644/93/1]
gi|261323779|ref|ZP_05962976.1| flagellar motor protein MotB [Brucella neotomae 5K33]
gi|261756178|ref|ZP_05999887.1| OmpA/MotB domain-containing protein [Brucella sp. F5/99]
gi|265987178|ref|ZP_06099735.1| flagellar motor protein MotB [Brucella pinnipedialis M292/94/1]
gi|265996841|ref|ZP_06109398.1| flagellar motor protein MotB [Brucella ceti M490/95/1]
gi|23464523|gb|AAN34303.1| chemotaxis motB protein [Brucella suis 1330]
gi|163676185|gb|ABY40295.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|225616279|gb|EEH13327.1| Protein mbhA [Brucella ceti str. Cudo]
gi|255998563|gb|ACU50250.1| flagellar motor protein [Brucella microti CCM 4915]
gi|260918402|gb|EEX85055.1| flagellar motor protein MotB [Brucella ceti B1/94]
gi|260921671|gb|EEX88239.1| flagellar motor protein MotB [Brucella ceti M13/05/1]
gi|261292142|gb|EEX95638.1| flagellar motor protein MotB [Brucella ceti M644/93/1]
gi|261298038|gb|EEY01535.1| flagellar motor protein MotB [Brucella pinnipedialis B2/94]
gi|261299759|gb|EEY03256.1| flagellar motor protein MotB [Brucella neotomae 5K33]
gi|261736162|gb|EEY24158.1| OmpA/MotB domain-containing protein [Brucella sp. F5/99]
gi|262551138|gb|EEZ07299.1| flagellar motor protein MotB [Brucella ceti M490/95/1]
gi|264659375|gb|EEZ29636.1| flagellar motor protein MotB [Brucella pinnipedialis M292/94/1]
Length = 366
Score = 54.4 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 47/142 (33%), Gaps = 9/142 (6%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSNLGSWL 76
+ P + ++ + D V F S +Q+L + +
Sbjct: 224 APNAGKAAKPEPMPDVTVVPVEGGVMIQLTDKVDYGMFTIGSAKPDARVVQMLERIAQVI 283
Query: 77 EKHDCDFLIEGHADELGSR---NSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEM 132
+ + +I GH D + + L RA + V G+ R ++V Y
Sbjct: 284 ARQPGEVIISGHTDARPFKSATYDNWRLSSARAQMAYYMLVRGGLDEKRVLRVEGYADRQ 343
Query: 133 PSVYGHDEDAYAKNRRAIVFLK 154
P A+NRR +F+K
Sbjct: 344 PKNPNDPNA--AENRRIDIFIK 363
>gi|255263223|ref|ZP_05342565.1| OmpA/MotB domain protein [Thalassiobium sp. R2A62]
gi|255105558|gb|EET48232.1| OmpA/MotB domain protein [Thalassiobium sp. R2A62]
Length = 725
Score = 54.4 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 42/119 (35%), Gaps = 14/119 (11%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLE--------KHDCDFLIEGHADELG-----S 94
V F S + A ++ + L + ++GH D
Sbjct: 603 FASEVLFRPGSADLSDAGRDEIAKVAGILRGVASEIPPSINWVIRVDGHTDNTPLSGLGQ 662
Query: 95 RNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
++ L RA +V Y V GI +R+ +G+ P G + A A+NRR +
Sbjct: 663 FANNWELSQARALSVVLYMVNFLGIPPNRLAANGFGQYQPVTNGDSDQARAQNRRIELK 721
>gi|219870536|ref|YP_002474911.1| lipoprotein Plp4/outer membrane protein and related
peptidoglycan-associated (lipo)proteins [Haemophilus
parasuis SH0165]
gi|219690740|gb|ACL31963.1| lipoprotein Plp4/outer membrane protein and related
peptidoglycan-associated (lipo)proteins [Haemophilus
parasuis SH0165]
Length = 281
Score = 54.4 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 40/107 (37%), Gaps = 8/107 (7%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FD + +V+ ++ L+ + G+AD LGS ++ L RRA V
Sbjct: 143 LFDFDKDILTTKGREVVDDVAEQLKSSGAEKVKLVGYADRLGSEEYNLDLSQRRANMVKA 202
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK------NRRAIVF 152
V +GI ++ YGK E A NRR +
Sbjct: 203 RLVEQGIKVP-IEAVGYGKANQVKACDGESGQALRDCLRPNRRVEIT 248
>gi|327398736|ref|YP_004339605.1| OmpA/MotB domain-containing protein [Hippea maritima DSM 10411]
gi|327181365|gb|AEA33546.1| OmpA/MotB domain protein [Hippea maritima DSM 10411]
Length = 287
Score = 54.4 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 31/124 (25%), Positives = 42/124 (33%), Gaps = 9/124 (7%)
Query: 38 SSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+E + D F S + P +VL + L IEGH D
Sbjct: 164 EITEEGLRIVIFDKNKRPMFYPGSDKLEPWAKEVLDIVAKQLADISNKITIEGHTDANPY 223
Query: 95 RN---SSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAI 150
S+ L RA A G+S SR + YG P G D NRR +
Sbjct: 224 VIGGLSNWDLSTMRANAARREIQTNGVSVSRFDSIVGYGDTRPV-PGTDPKD-PINRRIV 281
Query: 151 VFLK 154
+ +K
Sbjct: 282 ILVK 285
>gi|289165851|ref|YP_003455989.1| lipoprotein [Legionella longbeachae NSW150]
gi|288859024|emb|CBJ12952.1| putative lipoprotein [Legionella longbeachae NSW150]
Length = 239
Score = 54.4 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 40/111 (36%), Gaps = 1/111 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIA 100
+ + V +F S + L N+ L+ + + G D++G+R +
Sbjct: 102 DTMTLIVPVDKYFMFESPRLNEICYPGLINIVRLLKFYPLSPVYVAGFTDDVGTRYHKRS 161
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
L +A + + A I A +K YG + A NRR +
Sbjct: 162 LSQAQAETMLTFLWANNIPAQLLKAEGYGDKNDVGDNKLIHGSAFNRRIEI 212
>gi|189219864|ref|YP_001940505.1| Flagellar motor protein [Methylacidiphilum infernorum V4]
gi|189186722|gb|ACD83907.1| Flagellar motor protein [Methylacidiphilum infernorum V4]
Length = 311
Score = 54.4 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 17/128 (13%), Positives = 37/128 (28%), Gaps = 13/128 (10%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-----DCDFLIEGHADELG 93
+ S F I + +L L + L+ + + + + D
Sbjct: 151 QNPQNIVIRFSKSALFSYGGIKISNSGKALLEKLITALKPYLDNSKEAKIEVCAYTDNDP 210
Query: 94 S-------RNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAK 145
++ + R+ AV + + + + G P ++ K
Sbjct: 211 PALEVQNVYPTNWEISAMRSAAVIRTLIQLSQLPEDIFSLAAGGATKPIADNSFQEGKEK 270
Query: 146 NRRAIVFL 153
NRR + L
Sbjct: 271 NRRVEITL 278
>gi|54308335|ref|YP_129355.1| hypothetical protein PBPRA1142 [Photobacterium profundum SS9]
gi|46912763|emb|CAG19553.1| hypothetical protein PBPRA1142 [Photobacterium profundum SS9]
Length = 168
Score = 54.4 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 37/165 (22%), Positives = 61/165 (36%), Gaps = 13/165 (7%)
Query: 1 MQ--YSTIFIILSAITMMSI-SGIDNLDTKISSPDT--------VLNESSLQEQFSSSVG 49
M+ T+ I L M + D I D + +++ + +
Sbjct: 1 MKVFLRTVCITLLLTLMAGCVTDTYVSDENIDKFDDLSVKKFLIAEIQPTVEPEKKIYLS 60
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
FD ++P DI L + + + +I GH D GS + + L RR+ +
Sbjct: 61 LVSHFDFDKSILKPEDIAELDDFIAKVINLKGHIVIAGHTDYQGSDDYNEKLSFRRSTVI 120
Query: 110 FNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRR-AIVF 152
Y AR +V +G+ P V H A A NRR ++F
Sbjct: 121 QQYLAARIPVENYTFEVAYFGENNPIVKAHSLKANALNRRGIVIF 165
>gi|330970538|gb|EGH70604.1| OmpA/MotB [Pseudomonas syringae pv. aceris str. M302273PT]
Length = 830
Score = 54.4 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 49/130 (37%), Gaps = 12/130 (9%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSI---RPADIQVLSNLGSW--LEKHDCDFLIEGHADE 91
SL+ + ++ F + LS + + +I GHAD+
Sbjct: 698 TQSLKAIETITLESDTLFAFGRADFQSLKTEGQNQLSAIAGKLLSTPNIGKIVIAGHADQ 757
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK------ 145
LG S++ + +RA + Y V +G+ A + G E P V + A+
Sbjct: 758 LGDPQSNMQVSKQRAQTIKTYLVGKGVPAELVDAIGEGSEKPLVKCDMQQPRAQLIQCLE 817
Query: 146 -NRRAIVFLK 154
NRR + ++
Sbjct: 818 PNRRVEIEVR 827
>gi|299773231|gb|ADJ38690.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 370
Score = 54.4 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 51/126 (40%), Gaps = 15/126 (11%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + G+ D +G +++ L
Sbjct: 241 AFSSDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 300
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRA---IV 151
+RA V NY V++G++ + + YG+ P + A +RR +
Sbjct: 301 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPDRRVIHPEI 360
Query: 152 FLKGCR 157
++G +
Sbjct: 361 QVQGSK 366
>gi|256112172|ref|ZP_05453093.1| flagellar motor protein MotB [Brucella melitensis bv. 3 str. Ether]
gi|265993598|ref|ZP_06106155.1| flagellar motor protein MotB [Brucella melitensis bv. 3 str. Ether]
gi|262764468|gb|EEZ10500.1| flagellar motor protein MotB [Brucella melitensis bv. 3 str. Ether]
Length = 366
Score = 54.4 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 49/140 (35%), Gaps = 7/140 (5%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+G + V E + Q + V D F S +Q+L + + +
Sbjct: 227 AGKAAKPEPMPDVTVVPVEGGVMSQLTDKV-DYGMFTIGSAKPDARVVQMLERIAQVIAR 285
Query: 79 HDCDFLIEGHADELGSR---NSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPS 134
+ +I GH D + + L RA + V G+ R ++V Y P
Sbjct: 286 QPGEVIISGHTDARPFKSATYDNWRLSSARAQMAYYMLVRGGLDEKRVLRVEGYADRQPK 345
Query: 135 VYGHDEDAYAKNRRAIVFLK 154
A+NRR +F+K
Sbjct: 346 NPNDPNA--AENRRIDIFIK 363
>gi|251767113|ref|ZP_02266018.2| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia
mallei PRL-20]
gi|254189998|ref|ZP_04896507.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237]
gi|254200781|ref|ZP_04907146.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia
mallei FMH]
gi|254204753|ref|ZP_04911106.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia
mallei JHU]
gi|147748393|gb|EDK55468.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia
mallei FMH]
gi|147754339|gb|EDK61403.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia
mallei JHU]
gi|157937675|gb|EDO93345.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237]
gi|243063848|gb|EES46034.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia
mallei PRL-20]
Length = 274
Score = 54.4 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 45/141 (31%), Gaps = 15/141 (10%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIR---PADIQVLSNLG---SWLEKHDCDFL 84
P + + ++ + F ++R PA L + +H
Sbjct: 134 PAPAVQAPPGDDVKQFTLDYQLLFPFDKSALRDLLPAGRAELDRIAATLEQQYQHIRSVR 193
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY- 143
+ G+ D LG+ + L L RA + Y RG+ + GK P
Sbjct: 194 VTGYTDRLGTDAYNRQLSLARAETIRAYLTTRGLPGDLIVAQGLGKADPV-SNGCPAGRS 252
Query: 144 -------AKNRRAIVFLKGCR 157
A +RR + + G R
Sbjct: 253 AEAIACLAPDRRVRIDVAGER 273
>gi|53721933|ref|YP_110918.1| OmpA family protein [Burkholderia pseudomallei K96243]
gi|121596633|ref|YP_989916.1| OmpA/SmpA/OmlA family outer membrane lipoprotein [Burkholderia
mallei SAVP1]
gi|124383233|ref|YP_001024397.1| OmpA/SmpA/OmlA family outer membrane lipoprotein [Burkholderia
mallei NCTC 10229]
gi|126443869|ref|YP_001062318.1| ompA family protein [Burkholderia pseudomallei 668]
gi|126447564|ref|YP_001078178.1| OmpA/SmpA/OmlA family outer membrane lipoprotein [Burkholderia
mallei NCTC 10247]
gi|126456472|ref|YP_001075283.1| ompA family protein [Burkholderia pseudomallei 1106a]
gi|134279076|ref|ZP_01765789.1| ompA family protein [Burkholderia pseudomallei 305]
gi|167723261|ref|ZP_02406497.1| ompA family protein [Burkholderia pseudomallei DM98]
gi|167742230|ref|ZP_02415004.1| ompA family protein [Burkholderia pseudomallei 14]
gi|167819406|ref|ZP_02451086.1| ompA family protein [Burkholderia pseudomallei 91]
gi|167827777|ref|ZP_02459248.1| ompA family protein [Burkholderia pseudomallei 9]
gi|167849251|ref|ZP_02474759.1| ompA family protein [Burkholderia pseudomallei B7210]
gi|167897853|ref|ZP_02485255.1| ompA family protein [Burkholderia pseudomallei 7894]
gi|167906193|ref|ZP_02493398.1| ompA family protein [Burkholderia pseudomallei NCTC 13177]
gi|167914516|ref|ZP_02501607.1| ompA family protein [Burkholderia pseudomallei 112]
gi|167922410|ref|ZP_02509501.1| ompA family protein [Burkholderia pseudomallei BCC215]
gi|217418937|ref|ZP_03450444.1| ompA family protein [Burkholderia pseudomallei 576]
gi|226197635|ref|ZP_03793210.1| ompA family protein [Burkholderia pseudomallei Pakistan 9]
gi|237509538|ref|ZP_04522253.1| OmpA family protein [Burkholderia pseudomallei MSHR346]
gi|242311390|ref|ZP_04810407.1| ompA family protein [Burkholderia pseudomallei 1106b]
gi|254174141|ref|ZP_04880803.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia
mallei ATCC 10399]
gi|254183366|ref|ZP_04889958.1| ompA family protein [Burkholderia pseudomallei 1655]
gi|254193146|ref|ZP_04899581.1| ompA family protein [Burkholderia pseudomallei S13]
gi|254263683|ref|ZP_04954548.1| ompA family protein [Burkholderia pseudomallei 1710a]
gi|254300263|ref|ZP_04967709.1| ompA family protein [Burkholderia pseudomallei 406e]
gi|254357001|ref|ZP_04973276.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia
mallei 2002721280]
gi|52212347|emb|CAH38371.1| OmpA family protein [Burkholderia pseudomallei K96243]
gi|121224431|gb|ABM47962.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia
mallei SAVP1]
gi|124291253|gb|ABN00523.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia
mallei NCTC 10229]
gi|126223360|gb|ABN86865.1| ompA family protein [Burkholderia pseudomallei 668]
gi|126230240|gb|ABN93653.1| ompA family protein [Burkholderia pseudomallei 1106a]
gi|126240418|gb|ABO03530.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia
mallei NCTC 10247]
gi|134249495|gb|EBA49576.1| ompA family protein [Burkholderia pseudomallei 305]
gi|148026028|gb|EDK84151.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia
mallei 2002721280]
gi|157810253|gb|EDO87423.1| ompA family protein [Burkholderia pseudomallei 406e]
gi|160695187|gb|EDP85157.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia
mallei ATCC 10399]
gi|169649900|gb|EDS82593.1| ompA family protein [Burkholderia pseudomallei S13]
gi|184213899|gb|EDU10942.1| ompA family protein [Burkholderia pseudomallei 1655]
gi|217398241|gb|EEC38256.1| ompA family protein [Burkholderia pseudomallei 576]
gi|225930244|gb|EEH26256.1| ompA family protein [Burkholderia pseudomallei Pakistan 9]
gi|235001743|gb|EEP51167.1| OmpA family protein [Burkholderia pseudomallei MSHR346]
gi|242134629|gb|EES21032.1| ompA family protein [Burkholderia pseudomallei 1106b]
gi|254214685|gb|EET04070.1| ompA family protein [Burkholderia pseudomallei 1710a]
Length = 276
Score = 54.4 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 45/141 (31%), Gaps = 15/141 (10%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIR---PADIQVLSNLG---SWLEKHDCDFL 84
P + + ++ + F ++R PA L + +H
Sbjct: 136 PAPAVQAPPGDDVKQFTLDYQLLFPFDKSALRDLLPAGRAELDRIAATLEQQYQHIRSVR 195
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY- 143
+ G+ D LG+ + L L RA + Y RG+ + GK P
Sbjct: 196 VTGYTDRLGTDAYNRQLSLARAETIRAYLTTRGLPGDLIVAQGLGKADPV-SNGCPAGRS 254
Query: 144 -------AKNRRAIVFLKGCR 157
A +RR + + G R
Sbjct: 255 AEAIACLAPDRRVRIDVAGER 275
>gi|53717117|ref|YP_105939.1| OmpA/SmpA/OmlA family outer membrane lipoprotein [Burkholderia
mallei ATCC 23344]
gi|238561376|ref|ZP_00442008.2| OmpA family protein [Burkholderia mallei GB8 horse 4]
gi|52423087|gb|AAU46657.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia
mallei ATCC 23344]
gi|238524569|gb|EEP88001.1| OmpA family protein [Burkholderia mallei GB8 horse 4]
Length = 271
Score = 54.4 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 45/141 (31%), Gaps = 15/141 (10%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIR---PADIQVLSNLG---SWLEKHDCDFL 84
P + + ++ + F ++R PA L + +H
Sbjct: 131 PAPAVQAPPGDDVKQFTLDYQLLFPFDKSALRDLLPAGRAELDRIAATLEQQYQHIRSVR 190
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY- 143
+ G+ D LG+ + L L RA + Y RG+ + GK P
Sbjct: 191 VTGYTDRLGTDAYNRQLSLARAETIRAYLTTRGLPGDLIVAQGLGKADPV-SNGCPAGRS 249
Query: 144 -------AKNRRAIVFLKGCR 157
A +RR + + G R
Sbjct: 250 AEAIACLAPDRRVRIDVAGER 270
>gi|66048188|ref|YP_238029.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
gi|63258895|gb|AAY39991.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
Length = 830
Score = 54.4 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 49/130 (37%), Gaps = 12/130 (9%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSI---RPADIQVLSNLGSW--LEKHDCDFLIEGHADE 91
SL+ + ++ F + LS + + +I GHAD+
Sbjct: 698 TQSLKAIETITLESDTLFAFGRADFQSLKTEGQNQLSAIAGKLLSTPNIGKIVIAGHADQ 757
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK------ 145
LG S++ + +RA + Y V +G+ A + G E P V + A+
Sbjct: 758 LGDPQSNMQVSKQRAQTIKTYLVGKGVPAELVDAIGEGSEKPLVKCDMQQPRAQLIQCLE 817
Query: 146 -NRRAIVFLK 154
NRR + ++
Sbjct: 818 PNRRVEIEVR 827
>gi|76818337|ref|YP_337657.1| OmpA family protein [Burkholderia pseudomallei 1710b]
gi|76582810|gb|ABA52284.1| OmpA family protein [Burkholderia pseudomallei 1710b]
Length = 252
Score = 54.4 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 45/141 (31%), Gaps = 15/141 (10%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIR---PADIQVLSNLG---SWLEKHDCDFL 84
P + + ++ + F ++R PA L + +H
Sbjct: 112 PAPAVQAPPGDDVKQFTLDYQLLFPFDKSALRDLLPAGRAELDRIAATLEQQYQHIRSVR 171
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY- 143
+ G+ D LG+ + L L RA + Y RG+ + GK P
Sbjct: 172 VTGYTDRLGTDAYNRQLSLARAETIRAYLTTRGLPGDLIVAQGLGKADPV-SNGCPAGRS 230
Query: 144 -------AKNRRAIVFLKGCR 157
A +RR + + G R
Sbjct: 231 AEAIACLAPDRRVRIDVAGER 251
>gi|32035883|ref|ZP_00135676.1| COG2885: Outer membrane protein and related
peptidoglycan-associated (lipo)proteins [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
Length = 137
Score = 54.4 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 47/121 (38%), Gaps = 12/121 (9%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGLRR 105
V FD S++PA L + + + G+ D +G S++ L RR
Sbjct: 13 SSDVLFDFGKSSLKPAAATALDAANTEIANLGLATPAIQVNGYTDRIGKEASNLKLSQRR 72
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY-------AKNRRAIVFLKGC 156
A V NY V++G + + + YG+ P A +RR V ++G
Sbjct: 73 AETVANYLVSKGQNPANVTAVGYGEANPVTGATCDAVKGRKALIACLAPDRRVEVQVQGA 132
Query: 157 R 157
+
Sbjct: 133 K 133
>gi|78358627|ref|YP_390076.1| OmpA family protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78221032|gb|ABB40381.1| OmpA family protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 306
Score = 54.4 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 53/138 (38%), Gaps = 14/138 (10%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHA 89
PD+ LN S+ D+V F S+ + P I+VL + WL + + L+ GH
Sbjct: 99 DPDSDLNFQQNSMVQILSINDAVLFRPGSFVLLPGGIKVLDRILPWLLRVEHPLLLAGHT 158
Query: 90 DELGSRN--------------SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+ + L R AV+ Y RG+ A +KV ++ P
Sbjct: 159 ATQRAEEGQEYKVVFDEKQLAPTWRLSFMRVMAVYRYLTGRGMPAENLKVEAFAHYRPRF 218
Query: 136 YGHDEDAYAKNRRAIVFL 153
G D +N R + L
Sbjct: 219 DGTTPDGRRRNSRVDIVL 236
>gi|224418309|ref|ZP_03656315.1| putative flagellar motor protein [Helicobacter canadensis MIT
98-5491]
gi|253827631|ref|ZP_04870516.1| flagellar motor protein MotB [Helicobacter canadensis MIT 98-5491]
gi|253511037|gb|EES89696.1| flagellar motor protein MotB [Helicobacter canadensis MIT 98-5491]
Length = 276
Score = 54.4 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 41/136 (30%), Gaps = 8/136 (5%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN---LGSWLEKHD 80
+ S + E +E F + FD +I AD + L
Sbjct: 100 KEDARVSLGPSVVEDDGKEGFILRFHGRLLFDEEKTAIENADEILFLKRLALILQKMPQT 159
Query: 81 CDFLIEGHADE-----LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
I G+AD S+ L RA V + ++ ++ G +
Sbjct: 160 MHLDIIGYADNVEGKPNLKYQDSLGLSALRASNVAKILIENQVNPQKITSLGGGATNFLL 219
Query: 136 YGHDEDAYAKNRRAIV 151
+ + A+NRR
Sbjct: 220 PNTNAENRAQNRRVEF 235
>gi|213422612|ref|ZP_03355677.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 90
Score = 54.4 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 37/82 (45%), Gaps = 9/82 (10%)
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE---- 140
+ G D +GS + L +RA +V +Y +++GI + ++ G+ P +
Sbjct: 1 VLGFTDRIGSDAYNQGLSEKRAQSVVDYLISKGIPSDKISARGMGESNPVTGNTCDNVKP 60
Query: 141 -----DAYAKNRRAIVFLKGCR 157
D A +RR + +KG +
Sbjct: 61 RAALIDCLAPDRRVEIEVKGVK 82
>gi|305666576|ref|YP_003862863.1| OmpA/MotB family outer membrane protein [Maribacter sp. HTCC2170]
gi|88708847|gb|EAR01082.1| outer membrane protein, OmpA/MotB family [Maribacter sp. HTCC2170]
Length = 393
Score = 54.4 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 57/126 (45%), Gaps = 8/126 (6%)
Query: 36 NESSLQEQFSSSVGDS--VFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADEL 92
E+ ++Q +S+ + V+F +S + VL L + L++ I H D
Sbjct: 265 AENQRKQQLENSIKELGLVYFGFNSSYLNKNSKSVLGLLANLLKEKPSVHLKITSHTDSR 324
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD-----EDAYAKNR 147
G+ + + L RR NY ++ GIS +R+ ++G+E + D + + KNR
Sbjct: 325 GASDYNKWLSERRVERTKNYLMSIGISENRLVAEAFGEEQLTNECGDGVRCSAEKHRKNR 384
Query: 148 RAIVFL 153
R+ +
Sbjct: 385 RSEFEV 390
>gi|270159328|ref|ZP_06187984.1| OmpA family outer membrane protein [Legionella longbeachae D-4968]
gi|269987667|gb|EEZ93922.1| OmpA family outer membrane protein [Legionella longbeachae D-4968]
Length = 249
Score = 54.0 bits (128), Expect = 6e-06, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 40/111 (36%), Gaps = 1/111 (0%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIA 100
+ + V +F S + L N+ L+ + + G D++G+R +
Sbjct: 112 DTMTLIVPVDKYFMFESPRLNEICYPGLINIVRLLKFYPLSPVYVAGFTDDVGTRYHKRS 171
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
L +A + + A I A +K YG + A NRR +
Sbjct: 172 LSQAQAETMLTFLWANNIPAQLLKAEGYGDKNDVGDNKLIHGSAFNRRIEI 222
>gi|58422901|gb|AAW73250.1| OmpA [Enterobacter cloacae]
Length = 223
Score = 54.0 bits (128), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 5/104 (4%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P Q L L + L + D ++ G D +GS + L
Sbjct: 113 TLKSDVLFNFNKATLKPEGQQALDQLYTQLSNLDPKDGSVVVLGFTDRIGSDAYNQKLSE 172
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK 145
+RA +V +Y +++GI A+++ G+ P + A A
Sbjct: 173 KRAQSVVDYLISKGIPANKISPRGMGESNPVTGNTCDNVKARAA 216
>gi|330871941|gb|EGH06090.1| OmpA domain-containing protein [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 666
Score = 54.0 bits (128), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 49/130 (37%), Gaps = 12/130 (9%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSI---RPADIQVLSNLGSW--LEKHDCDFLIEGHADE 91
SL+ + ++ F + LS + + +I GHAD+
Sbjct: 534 TQSLKAIETITLESDTLFAFGRADFQSLKTEGQNQLSAIAGKLLSTPNIGKIMIAGHADQ 593
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK------ 145
LG S++ + +RA + Y V +G+ A + G E P V + A+
Sbjct: 594 LGDPQSNMQVSKQRAQTIKTYLVGKGVPAELVDAVGEGSEKPLVKCDMQQPRAQLIQCLE 653
Query: 146 -NRRAIVFLK 154
NRR + ++
Sbjct: 654 PNRRVEIEVR 663
>gi|300726777|ref|ZP_07060207.1| immunogenic 75 kDa protein PG4 [Prevotella bryantii B14]
gi|299775890|gb|EFI72470.1| immunogenic 75 kDa protein PG4 [Prevotella bryantii B14]
Length = 689
Score = 54.0 bits (128), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 49/143 (34%), Gaps = 28/143 (19%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGL 103
+ + D++F++ ++ + L L + E + + H D GS + + L
Sbjct: 514 APVLIDNIFYEFDKANLTSESTKALDELVNLLNENPNVTIELSAHCDYKGSEDYNKQLSQ 573
Query: 104 RRAYAVFNYFVARGISASRMKVTSYG-------------KEMPSVYGH--DED------- 141
RRA +V NY +A+GI+ R+ YG K E+
Sbjct: 574 RRAESVVNYLIAKGIAKDRLTPVGYGKDKPKTIKKKLTEKYKWLKENDVLTEEYIKKLSK 633
Query: 142 -----AYAKNRRAIVFLKGCRAN 159
NRR + N
Sbjct: 634 EEQEICNQLNRRTEFIVLRTTYN 656
>gi|323697841|ref|ZP_08109753.1| OmpA/MotB domain protein [Desulfovibrio sp. ND132]
gi|323457773|gb|EGB13638.1| OmpA/MotB domain protein [Desulfovibrio desulfuricans ND132]
Length = 254
Score = 54.0 bits (128), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 60/150 (40%), Gaps = 8/150 (5%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
+L ++ M S ++NLD K+ V + ++ + F + +RP Q+
Sbjct: 100 LLLSVVMRIKSMVENLDNKLKEGAGVNAD---RDGVVFRTSSAALFQPFTAELRPDATQI 156
Query: 69 LSNLGSWLEKHDCDFLIEGHADELGSR----NSSIALGLRRAYAVFNYFVARGISA-SRM 123
L + L+ + + ++ GH D+ S+ L RA +Y V +G +R
Sbjct: 157 LDGVIKVLKDYKLNLVVRGHTDDRPIHTAKYPSNWELSAARAAVALDYIVNKGGIEINRA 216
Query: 124 KVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
K Y P V E +N+R ++
Sbjct: 217 KAVGYADTRPEVPNDTEADRLRNQRVEFYI 246
>gi|294784302|ref|ZP_06749596.1| outer membrane protein [Fusobacterium sp. 3_1_27]
gi|294488058|gb|EFG35410.1| outer membrane protein [Fusobacterium sp. 3_1_27]
Length = 71
Score = 54.0 bits (128), Expect = 6e-06, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 103 LRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RRA +V + G+S R+ + + G+E P ++ A+NRR L
Sbjct: 1 RRRAESVKAKLLEFGLSEDRIVGIEAMGEEQPIATNATKEGRAQNRRVEFKL 52
>gi|114778405|ref|ZP_01453252.1| outer membrane protein A precursor [Mariprofundus ferrooxydans
PV-1]
gi|114551368|gb|EAU53925.1| outer membrane protein A precursor [Mariprofundus ferrooxydans
PV-1]
Length = 360
Score = 54.0 bits (128), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 46/127 (36%), Gaps = 11/127 (8%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALG 102
F+S + F + ++R + L L+ ++ G+ D +G+ + L
Sbjct: 233 FASDSSANSLFGFNRSTLRNEGKRALDKFVESLKGASFETMVVTGYTDRIGTDEYNQKLS 292
Query: 103 LRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKN---------RRAIVF 152
RRA AV +Y V G ++ G+ P D + N RR V
Sbjct: 293 ERRANAVRDYLVKFGGIPADKITARGAGESNPVTKREDCAGKSGNPLITCLAPDRRVEVE 352
Query: 153 LKGCRAN 159
+ R +
Sbjct: 353 VTATRTS 359
>gi|295690965|ref|YP_003594658.1| OmpA/MotB domain-containing protein [Caulobacter segnis ATCC 21756]
gi|295432868|gb|ADG12040.1| OmpA/MotB domain protein [Caulobacter segnis ATCC 21756]
Length = 386
Score = 54.0 bits (128), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVF 110
V+F Y + P V+ + + ++ GH D GS + L RRA AV
Sbjct: 282 VYFPFDQYVLTPEAQAVVQQAADYAKGGGATKIVVTGHTDTSGSDAYNRRLSERRAKAVA 341
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ V G++A+ + V G+ P+V D NRR+ V +
Sbjct: 342 DGLVGMGVNATALAVDWKGESAPAVATGDGVKEPLNRRSTVSI 384
>gi|269958634|ref|YP_003328421.1| putative outer membrane protein OmpA [Anaplasma centrale str.
Israel]
gi|269848463|gb|ACZ49107.1| putative outer membrane protein OmpA [Anaplasma centrale str.
Israel]
Length = 212
Score = 54.0 bits (128), Expect = 6e-06, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIAL 101
S+ + V+FD + Y I+ + +VL L ++ LI GH D G+ ++AL
Sbjct: 35 PLSAGRVEKVYFDFNKYEIKGSGKKVLLGLVERMKADKMSTLLIVGHTDSRGTEEYNLAL 94
Query: 102 GLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMP--SVYGHD----EDAYAKNRRAIVFLK 154
G RRA AV + + S + R+ S GK P VY D E A+A+NRR ++ ++
Sbjct: 95 GERRANAVKEFILGCDRSLSPRISTQSRGKAEPEILVYSSDFKEAEKAHAQNRRVVLIME 154
>gi|149918137|ref|ZP_01906630.1| OmpA family protein [Plesiocystis pacifica SIR-1]
gi|149821142|gb|EDM80548.1| OmpA family protein [Plesiocystis pacifica SIR-1]
Length = 158
Score = 54.0 bits (128), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 52/143 (36%), Gaps = 10/143 (6%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSV----GDSVFFDTSSYSIRPADIQVLSNLG 73
+S P++++ + + D F S + + L+ L
Sbjct: 17 LSATRPRQPSAGEPESLVTGNLVIADNVVDACLLPKDEALFAYDSAKLSEKAERTLALLA 76
Query: 74 SWLEKHDCD---FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
+ L+ GH D GS ++ LGL RA AV +Y V G+ R++ S G+
Sbjct: 77 RCFDTGPMRYQDLLVTGHTDPRGSDEYNLDLGLERAVAVRDYLVDEGVEDFRIEARSVGE 136
Query: 131 EMPSVYGHDEDAYAKNRRAIVFL 153
+ + +R+ + L
Sbjct: 137 RR--ASND-PEDWDDDRKVEIQL 156
>gi|330448674|ref|ZP_08312322.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328492865|dbj|GAA06819.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 180
Score = 54.0 bits (128), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/154 (20%), Positives = 61/154 (39%), Gaps = 5/154 (3%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ +++ +SG + + + + + + + V F
Sbjct: 1 MKVRLFLLLV----CTYMSGCVSDRAIYADYGPLACQKACPQVVIDAWPSVVNFGFDKSE 56
Query: 61 IRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
+ PA++ L+N + + + G D GS + AL +RRA V +Y ++GIS
Sbjct: 57 LTPAEMSRLANAVNVLQQNPSFKVAVVGSTDPEGSEEYNDALSMRRAQVVGDYLQSQGIS 116
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+SRM + G+ ++ NRR + L
Sbjct: 117 SSRMTLIGTGERELFIHTDSRSDNRANRRTQLIL 150
>gi|259415649|ref|ZP_05739570.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
gi|259348879|gb|EEW60641.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
Length = 136
Score = 54.0 bits (128), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 2/99 (2%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FF T ++ A + L F++ GH D S ++AL RRA AV
Sbjct: 35 FFATDGSTVNAAGRKRLQEWFRNAMPGTRSFVVAGHTDSRASDEYNMALSQRRADAVAQI 94
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
R + A V +YG+ P V A+NRR +
Sbjct: 95 --GRSVGARIKDVRAYGERSPRVPNRGAANLAQNRRVEI 131
>gi|254464865|ref|ZP_05078276.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
gi|206685773|gb|EDZ46255.1| OmpA/MotB [Rhodobacterales bacterium Y4I]
Length = 517
Score = 54.0 bits (128), Expect = 6e-06, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 40/108 (37%), Gaps = 7/108 (6%)
Query: 54 FDTSSYSIRPADIQVLSNLGSW---LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
F+ S + L E + + G +D +G + + L+RA AV
Sbjct: 410 FEPGSARPDAQSRSNIEQLARALEAGEFDAKEIVFAGFSDGVGPAEGNRQIALKRAGAVR 469
Query: 111 NYFVARGISAS----RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ V +A R++ +G+ +P NRR V+++
Sbjct: 470 DAVVKAAETADISRVRIRTEGFGEALPMACDDSAWGRQINRRVEVWVR 517
>gi|167616252|ref|ZP_02384887.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia
thailandensis Bt4]
gi|257142822|ref|ZP_05591084.1| OmpA/SmpA/OmlA family outer membrane lipoprotein [Burkholderia
thailandensis E264]
Length = 267
Score = 54.0 bits (128), Expect = 6e-06, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 52/153 (33%), Gaps = 16/153 (10%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIR---PADIQVLSNLG-- 73
S L P + + + ++ + F ++R PA L +
Sbjct: 116 SACKALADGP-KPAPAVQTAPRDDVKQFTLDYQLLFPFDKSALRDLLPAGRAELDRIAAT 174
Query: 74 -SWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
+H + G+ D LG+ + L L RA A+ Y RG+ + + GK
Sbjct: 175 LEQQYQHIRSVRVTGYTDRLGTNTYNRQLSLARAEAIREYLTTRGLPGNLIVAQGLGKAD 234
Query: 133 PSVYGHDEDAY--------AKNRRAIVFLKGCR 157
P D + A +RR + + G R
Sbjct: 235 PV-SNGCPDGHSAEAIACLAPDRRVRIDVAGER 266
>gi|59713370|ref|YP_206145.1| flagellar motor protein MotB2 [Vibrio fischeri ES114]
gi|59481618|gb|AAW87257.1| flagellar motor protein MotB2 [Vibrio fischeri ES114]
Length = 213
Score = 54.0 bits (128), Expect = 6e-06, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 53/131 (40%), Gaps = 9/131 (6%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHA 89
+ +++ + + +D+ S S++P ++S +++ D + ++EGH+
Sbjct: 81 DSVVVTAVTDGIRIDLNSENLYDSGSASLKPEGKALISEFAEAMKEVDLNGRSIIVEGHS 140
Query: 90 DELGSRNSS----IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH--DEDAY 143
D+L L RA V + + S+++ +Y P E
Sbjct: 141 DDLPIHTKQFDSNWELSGARAIEVTKQLIKFNVDKSQLRAVAYADAQPRADKALPIEQQR 200
Query: 144 AKNRRAIVFLK 154
NRR ++++K
Sbjct: 201 QLNRRVVIYIK 211
>gi|167035280|ref|YP_001670511.1| OmpA/MotB domain-containing protein [Pseudomonas putida GB-1]
gi|166861768|gb|ABZ00176.1| OmpA/MotB domain protein [Pseudomonas putida GB-1]
Length = 325
Score = 54.0 bits (128), Expect = 6e-06, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 32/71 (45%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
L+ GHAD G+ ++ L L RA +V F G+ R+ + G MP +
Sbjct: 162 VLVLGHADSSGAAAANQKLSLERAASVSAIFRLSGLQRDRLTLKGMGSVMPRAANDSAEG 221
Query: 143 YAKNRRAIVFL 153
+ NRR + L
Sbjct: 222 RSLNRRVEMLL 232
>gi|224536108|ref|ZP_03676647.1| hypothetical protein BACCELL_00973 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522279|gb|EEF91384.1| hypothetical protein BACCELL_00973 [Bacteroides cellulosilyticus
DSM 14838]
Length = 667
Score = 54.0 bits (128), Expect = 6e-06, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 42/132 (31%), Gaps = 28/132 (21%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
+++F++ + L L + + + H D G+ + ++ L RRA +
Sbjct: 530 ENIFYEFDKADLTSESTVALDELIELLNDNPNVTIELSAHCDYKGNDDYNLRLSQRRAES 589
Query: 109 VFNYFVARGISASRMKVTSYGKEMP---------------------------SVYGHDED 141
V Y + GI R+ YG++ P E
Sbjct: 590 VVRYLIKGGIDPERLTPKGYGEQQPKTVTKFTLKSAPFLKEGDVLTEEFIKNLPPEQQEI 649
Query: 142 AYAKNRRAIVFL 153
A NRR +
Sbjct: 650 CNAINRRTEFKV 661
>gi|261885573|ref|ZP_06009612.1| Omp18 [Campylobacter fetus subsp. venerealis str. Azul-94]
Length = 72
Score = 54.0 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 41/70 (58%)
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
++EG+ DE GS + ALG++RA + VA+G+SA R+++TS G+ P +
Sbjct: 1 MVEGNCDEWGSDEYNYALGVKRAKTAKDALVAQGVSADRIEITSNGESKPVCTERTKACD 60
Query: 144 AKNRRAIVFL 153
A+NRR +
Sbjct: 61 AQNRRDEFKI 70
>gi|58422905|gb|AAW73252.1| OmpA [Salmonella sp. CDC 156-87]
Length = 226
Score = 54.0 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 52/139 (37%), Gaps = 5/139 (3%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + +S + + ++ V F+ + +++P Q L
Sbjct: 81 GLLSVGVSYRFGQQEAAPVVAPAPAPAPEVQTKHFTLKSDVLFNFNKSTLKPEGQQALDQ 140
Query: 72 LGSWL---EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L + L + D ++ G D +GS + L +RA +V +Y +++GI + ++
Sbjct: 141 LYNQLSNLDPKDGSVVVLGFTDRIGSDAYNQGLSEKRAQSVVDYLISKGIPSDKISARGM 200
Query: 129 GKEMPS--VYGHDEDAYAK 145
G+ P + A
Sbjct: 201 GESNPVTGNTCDNVKPRAA 219
>gi|78356759|ref|YP_388208.1| chemotaxis protein PomB [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78219164|gb|ABB38513.1| chemotaxis protein PomB [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 253
Score = 54.0 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 39/120 (32%), Gaps = 6/120 (5%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS--- 94
++ + F S P + + L + + D ++ H + +
Sbjct: 124 TTEDAGVVIRIPSYALFAPGSAKPLPDAASKTATVVRILRERNLDLVVRCHTSDEKAEEE 183
Query: 95 --RNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
S+ L RA AV + I SRMK Y P + + ++ A N R
Sbjct: 184 SLYPSNWELSSARAAAVLRLLIKEGDIPPSRMKAVGYADSQPLLPNNTDENRAINSRMEF 243
>gi|256019218|ref|ZP_05433083.1| outer membrane protein A [Shigella sp. D9]
Length = 109
Score = 54.0 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 9/104 (8%)
Query: 61 IRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI 118
+ + L +L L + ++ GH D LGS + ++ L +RA V Y +A+G+
Sbjct: 1 MSQQGLADLDHLAMNLNSFEKINGIIVIGHTDRLGSEDYNLTLSRKRAETVRQYLIAKGL 60
Query: 119 SASRMKVTSYGKEMPSVYGHDEDAYA-------KNRRAIVFLKG 155
A ++ GK P + A NRR V + G
Sbjct: 61 PAEKITSIGMGKSQPVKKCKYNNDRASLIVCLQPNRRVEVEVDG 104
>gi|16127724|ref|NP_422288.1| OmpA family protein [Caulobacter crescentus CB15]
gi|221236545|ref|YP_002518982.1| cell surface antigen Sca2 [Caulobacter crescentus NA1000]
gi|13425220|gb|AAK25456.1| OmpA family protein [Caulobacter crescentus CB15]
gi|220965718|gb|ACL97074.1| cell surface antigen Sca2 [Caulobacter crescentus NA1000]
Length = 449
Score = 54.0 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 1/104 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAV 109
V+F + P V++ + ++ GH D GS + L RRA AV
Sbjct: 344 IVYFPFDQSVLTPEAQSVVTEAAKYSNDGKATKIIVVGHTDTSGSPKYNAKLSERRARAV 403
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ V++G+S + + V G+ P+V D NRR+ + +
Sbjct: 404 ADALVSQGVSQNVLGVDWKGESAPAVATGDGVKEPLNRRSTISI 447
>gi|228018149|gb|ACP52753.1| fibronectin-binding protein [Campylobacter jejuni]
gi|228018157|gb|ACP52757.1| fibronectin-binding protein [Campylobacter jejuni]
gi|228018163|gb|ACP52760.1| fibronectin-binding protein [Campylobacter jejuni]
Length = 211
Score = 54.0 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 47/129 (36%), Gaps = 1/129 (0%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+ ++ + + ++ F +I P + + +
Sbjct: 83 AVEEVADTRPAPQTKCPVEPREGALLDENGCEKTISLEGHFGFDKTTINPTFQEKIKEIA 142
Query: 74 SW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
E D ++EGH D +GSR + L RRA +V N G+ SR+K YG++
Sbjct: 143 KVLDENERYDTILEGHTDNIGSRAYNQKLSERRAKSVANELEKYGVEKSRIKTVGYGQDN 202
Query: 133 PSVYGHDED 141
P ++
Sbjct: 203 PRSSNDTKE 211
>gi|257092704|ref|YP_003166345.1| OmpA/MotB domain-containing protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257045228|gb|ACV34416.1| OmpA/MotB domain protein [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 221
Score = 54.0 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 49/122 (40%), Gaps = 10/122 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+V FD + ++RP L + + + +I GH D +GS + L R
Sbjct: 100 ITVAADALFDFNKATLRPEGKAKLDEVVAKAGAIKLEVIIAVGHTDRIGSDAYNQKLSER 159
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH------DE---DAYAKNRRAIVFLKG 155
RA AV Y V++GI A+R+ GK+ P +RR + L G
Sbjct: 160 RAAAVKQYLVSKGIDANRVYTEGKGKKNPVTKPDQCLGKTSPKVIACLQPDRRVDIELIG 219
Query: 156 CR 157
+
Sbjct: 220 TK 221
>gi|254507991|ref|ZP_05120119.1| outer membrane protein [Vibrio parahaemolyticus 16]
gi|219549099|gb|EED26096.1| outer membrane protein [Vibrio parahaemolyticus 16]
Length = 278
Score = 54.0 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 50/139 (35%), Gaps = 1/139 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
++ ++ + + F +S + P + L+ + E
Sbjct: 126 TSQTKCVPPMDEGAFHQRLAVIDELFNLLNVDNQFAFNSSEVNPKYMGHLAKAANMLAEH 185
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ + GHAD +G + L L RA V Y G++ +R+ S G +P G+
Sbjct: 186 PSLNLKVTGHADSVGDVAYNEKLALERAQQVKRYLSIFGLAPTRIATHSVGDTLPLHEGN 245
Query: 139 DEDAYAKNRRAIVFLKGCR 157
E NRR + + +
Sbjct: 246 SEGVKLTNRRVSIEVIDTQ 264
>gi|213970767|ref|ZP_03398891.1| OmpA domain protein [Pseudomonas syringae pv. tomato T1]
gi|301383000|ref|ZP_07231418.1| OmpA domain-containing protein [Pseudomonas syringae pv. tomato
Max13]
gi|302059103|ref|ZP_07250644.1| OmpA domain-containing protein [Pseudomonas syringae pv. tomato
K40]
gi|302133343|ref|ZP_07259333.1| OmpA domain-containing protein [Pseudomonas syringae pv. tomato
NCPPB 1108]
gi|213924439|gb|EEB58010.1| OmpA domain protein [Pseudomonas syringae pv. tomato T1]
Length = 830
Score = 54.0 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 49/130 (37%), Gaps = 12/130 (9%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSI---RPADIQVLSNLGSW--LEKHDCDFLIEGHADE 91
SL+ + ++ F + LS + + +I GHAD+
Sbjct: 698 TQSLKAIETITLESDTLFAFGRADFQSLKVEGQNQLSAIAGKLLSTPNIGKIVIAGHADQ 757
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK------ 145
LG S++ + +RA + Y V +G+ A + G E P V + A+
Sbjct: 758 LGDPQSNMQVSKQRAQTIKTYLVGKGVPAELVDAVGEGSEKPLVRCDMQQPRAQLIQCLE 817
Query: 146 -NRRAIVFLK 154
NRR + ++
Sbjct: 818 PNRRVEIEVR 827
>gi|331018731|gb|EGH98787.1| OmpA domain-containing protein [Pseudomonas syringae pv. lachrymans
str. M302278PT]
Length = 830
Score = 54.0 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 49/130 (37%), Gaps = 12/130 (9%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSI---RPADIQVLSNLGSW--LEKHDCDFLIEGHADE 91
SL+ + ++ F + LS + + +I GHAD+
Sbjct: 698 TQSLKAIETITLESDTLFAFGRADFQSLKVEGQNQLSAIAGKLLSTPNIGKIVIAGHADQ 757
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK------ 145
LG S++ + +RA + Y V +G+ A + G E P V + A+
Sbjct: 758 LGDPQSNMQVSKQRAQTIKTYLVGKGVPAELVDAVGEGSEKPLVRCDMQQPRAQLIQCLE 817
Query: 146 -NRRAIVFLK 154
NRR + ++
Sbjct: 818 PNRRVEIEVR 827
>gi|315127493|ref|YP_004069496.1| hypothetical protein PSM_A2431 [Pseudoalteromonas sp. SM9913]
gi|315016007|gb|ADT69345.1| conserved hypothetical protein [Pseudoalteromonas sp. SM9913]
Length = 241
Score = 54.0 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 54/129 (41%), Gaps = 1/129 (0%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADE 91
NE Q Q ++ + +V F T S I P + L + + + G AD+
Sbjct: 107 AQQNEQLTQSQLNNLLAMTVQFKTGSSDIAPHFAKQLDQLVALLKSQPQLALDLSGFADQ 166
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
G +++ L R AV +Y + +G+S +R+ ++G++ + + +RR +
Sbjct: 167 RGEEQANLLLSKARVNAVQSYLIKQGVSHTRLSAQAFGEQQSIANSNTLEDNFFDRRVTL 226
Query: 152 FLKGCRANT 160
+ T
Sbjct: 227 TTRALNQTT 235
>gi|145298280|ref|YP_001141121.1| outer membrane protein [Aeromonas salmonicida subsp. salmonicida
A449]
gi|142851052|gb|ABO89373.1| outer membrane protein [Aeromonas salmonicida subsp. salmonicida
A449]
Length = 333
Score = 54.0 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 50/130 (38%), Gaps = 12/130 (9%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPA---DIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSI 99
S ++ V F +++P + L ++ D ++ G+ D +GS ++
Sbjct: 203 DKSFALSSDVLFAFGKSTLKPEGVAALNTLYQQIVDVQPKDGSAVVVGYTDRIGSDAYNL 262
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS---------VYGHDEDAYAKNRRAI 150
L RA V ++ V +G+ A ++ + G+ P A +RR
Sbjct: 263 KLSEARARTVADFLVGKGLPAGKVAIEGRGEASPVTGTQCDGIKAKAQLIACLAPDRRVE 322
Query: 151 VFLKGCRANT 160
V + G + T
Sbjct: 323 VRVTGIQEVT 332
>gi|255262704|ref|ZP_05342046.1| inner membrane lipoprotein YiaD [Thalassiobium sp. R2A62]
gi|255105039|gb|EET47713.1| inner membrane lipoprotein YiaD [Thalassiobium sp. R2A62]
Length = 43
Score = 54.0 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
VARG+ A R+ YG+ P E+ A NRR +
Sbjct: 1 MVARGVDAERISAQGYGESEPIATNETEEGRAANRRTTIT 40
>gi|83594714|ref|YP_428466.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170]
gi|83577628|gb|ABC24179.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170]
Length = 242
Score = 54.0 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 44/135 (32%), Gaps = 4/135 (2%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LE 77
+G + ++P + S + F + + +L+ +
Sbjct: 107 AGTPLHVSLTAAPTDAVTVGGTVTPPSPRPS--LHFASDQADLDDDAGPLLAEAARVLKQ 164
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVY 136
++ GH D+ + + ++ L RRA AV V + R+ G P
Sbjct: 165 DPRLSLMVMGHTDDRHALDEALDLSARRAEAVVAALVEDHGVERGRLVPRGAGWLAPVAS 224
Query: 137 GHDEDAYAKNRRAIV 151
+ A NRR +
Sbjct: 225 NRTQAGRALNRRVDL 239
>gi|260891273|ref|ZP_05902536.1| OmpA family protein [Leptotrichia hofstadii F0254]
gi|260858949|gb|EEX73449.1| OmpA family protein [Leptotrichia hofstadii F0254]
Length = 367
Score = 53.7 bits (127), Expect = 7e-06, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 33/106 (31%), Gaps = 4/106 (3%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHD--CDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
F + L + + + GH D GS + L + RA V
Sbjct: 251 FKVDGRVPNEGEAADLRTIAGVINQFADGGSIDFVGHTDSTGSAAYNQKLSVARAQNVAK 310
Query: 112 YFVARGISASRM--KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
G+ + +T G+ P+ + NRR +F +
Sbjct: 311 LLREYGLKNTISYGTITGQGESNPADTNDTVEGRYNNRRVELFFQN 356
>gi|325068018|ref|ZP_08126691.1| OmpA/MotB [Actinomyces oris K20]
Length = 139
Score = 53.7 bits (127), Expect = 7e-06, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 50/129 (38%), Gaps = 8/129 (6%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGH 88
S D+ + SS + +S+ V FD S ++ QVL + K + GH
Sbjct: 9 SSDSAVTYSSDGQTTVASLSGDVTFDVDSSALTDRAKQVLDEIVKRWNGKPPATVTVVGH 68
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH------DEDA 142
D + + L +RA AV +Y ++ + ++ + G+ P +E
Sbjct: 69 TDSVADDAHNQTLSEQRAKAVADYLTSKVP-SLNVQSSGKGESEPVASETNADGSVNEAG 127
Query: 143 YAKNRRAIV 151
A NR V
Sbjct: 128 KAANRHVDV 136
>gi|107027335|ref|YP_624846.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
gi|105896709|gb|ABF79873.1| OmpA/MotB [Burkholderia cenocepacia AU 1054]
Length = 119
Score = 53.7 bits (127), Expect = 7e-06, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 83 FLIEGHADELG----SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ G+ D + SR ++ AL RA V F A G+ + T G P
Sbjct: 43 VQVVGYTDNVPAGAISRGNNQALSEARAREVARIFAAAGVPMQNISATGQGDADPLADNG 102
Query: 139 DEDAYAKNRRAIVFLKG 155
++NRR V +
Sbjct: 103 TAPGRSRNRRVEVTVSN 119
>gi|228018085|gb|ACP52721.1| fibronectin-binding protein [Campylobacter coli]
Length = 224
Score = 53.7 bits (127), Expect = 7e-06, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 49/127 (38%), Gaps = 11/127 (8%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSV----------FFDTSSYSIRPADIQVLSNLGSW 75
+ V +E ++ D FD +I PA + + +
Sbjct: 98 VTPAPAPVVSQSKCSEEPREGALLDENGCEKTIYLEGHFDFDKVNINPAFEEQIKEIAQI 157
Query: 76 -LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
E D ++EGH D +GSR+ + L RRA +V G+ SR++ YG++ P
Sbjct: 158 LDENVRYDTILEGHTDNIGSRSYNQKLSERRANSVAKELEKFGVDKSRIQTVGYGQDKPR 217
Query: 135 VYGHDED 141
++
Sbjct: 218 SSNDTKE 224
>gi|221640665|ref|YP_002526927.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides KD131]
gi|221161446|gb|ACM02426.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides KD131]
Length = 485
Score = 53.7 bits (127), Expect = 7e-06, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 31/100 (31%), Gaps = 1/100 (1%)
Query: 56 TSSYSI-RPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
T S + L L ++ G +D G +++ L RA V
Sbjct: 378 TDSLEPQSRESLSELIKLLEIGRFRGQQLMLIGFSDGRGPARANLDLSRERAETVAAALR 437
Query: 115 ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
V +G+ +P NRR ++L+
Sbjct: 438 EAVPVLGPPLVEGFGEALPLACDTTVAGRRMNRRVELWLR 477
>gi|167648617|ref|YP_001686280.1| OmpA/MotB domain-containing protein [Caulobacter sp. K31]
gi|167351047|gb|ABZ73782.1| OmpA/MotB domain protein [Caulobacter sp. K31]
Length = 401
Score = 53.7 bits (127), Expect = 7e-06, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 1/104 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
V+F Y + P V+S ++ H ++ GH D GS + L RRA AV
Sbjct: 296 IVYFPFDQYVLTPEAQSVVSEAANYATSGHATKLVVVGHTDTSGSPKYNAKLSERRAKAV 355
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ V G++A + V G+ P+V D NRR+ + +
Sbjct: 356 ADALVGAGVAADALAVDWKGESAPAVATGDGVKEPLNRRSTISI 399
>gi|83312347|ref|YP_422611.1| Outer membrane protein and related peptidoglycan-associated lipo
protein [Magnetospirillum magneticum AMB-1]
gi|82947188|dbj|BAE52052.1| Outer membrane protein and related peptidoglycan-associated lipo
protein [Magnetospirillum magneticum AMB-1]
Length = 410
Score = 53.7 bits (127), Expect = 7e-06, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVF 110
V FD S + P +Q L + + + G+ D LGS ++++ L +RA AV
Sbjct: 177 VNFDLGSAKLSPQALQTLKEAAAAQAQMYAPLVSVAGYTDTLGSADANLRLSRQRADAVT 236
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
G++ + + + G+ +V D A AKNRR + L G
Sbjct: 237 AELTKLGVNPAIIAENALGESSLAVATGDNKAEAKNRRVEITLAG 281
>gi|329849481|ref|ZP_08264327.1| ompA family protein [Asticcacaulis biprosthecum C19]
gi|328841392|gb|EGF90962.1| ompA family protein [Asticcacaulis biprosthecum C19]
Length = 408
Score = 53.7 bits (127), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 1/104 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAV 109
V+F+ + V+S + + ++ GHAD GS +I L RRA V
Sbjct: 303 IVYFEFDKSDLTADAQAVVSAAADYAKTGGAARVVVVGHADTSGSAAYNIRLSERRAKTV 362
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ G+ S++ V G+ P+V D NRR+ + +
Sbjct: 363 ADALAGLGVDGSKLAVDWKGESQPAVATGDGVKEPLNRRSTIDI 406
>gi|228018099|gb|ACP52728.1| fibronectin-binding protein [Campylobacter coli]
Length = 224
Score = 53.7 bits (127), Expect = 8e-06, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 52/118 (44%), Gaps = 2/118 (1%)
Query: 26 TKISSPDTVLNESSLQE-QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDF 83
++ SP+ + L E ++ FD +I PA + + + E D
Sbjct: 107 SQSKSPEEPREGALLDENGCEKTIYLEGHFDFDKVNINPAFEEQIKEIAQILDENVRYDT 166
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
++EGH D +GSR+ + L RRA +V G+ SR++ YG++ P ++
Sbjct: 167 ILEGHTDNIGSRSYNQKLSERRANSVAKELEKFGVDKSRIQTVGYGQDKPRSSNDTKE 224
>gi|167578122|ref|ZP_02370996.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia
thailandensis TXDOH]
Length = 267
Score = 53.7 bits (127), Expect = 8e-06, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 50/141 (35%), Gaps = 15/141 (10%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIR---PADIQVLSNLG---SWLEKHDCDFL 84
P + + + ++ + F ++R PA L + +H
Sbjct: 127 PAPAVQTAPSDDVKQFTLDYQLLFPFDKSALRDLLPAGRAELDRIAATLEQQYQHIRSVR 186
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY- 143
+ G+ D LG+ + L L RA A+ Y RG+ + + GK P D Y
Sbjct: 187 VTGYTDRLGTDTYNRQLSLARAEAIREYLTTRGLPGNLIVAQGLGKADPV-SNGCPDGYS 245
Query: 144 -------AKNRRAIVFLKGCR 157
A +RR + + G R
Sbjct: 246 AEAIACLAPDRRVRIDVAGER 266
>gi|188579878|ref|YP_001923323.1| OmpA/MotB domain protein [Methylobacterium populi BJ001]
gi|179343376|gb|ACB78788.1| OmpA/MotB domain protein [Methylobacterium populi BJ001]
Length = 470
Score = 53.7 bits (127), Expect = 8e-06, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 53/153 (34%), Gaps = 10/153 (6%)
Query: 11 SAITMMSIS-GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADI 66
+A++ + S+P L E S+ D + F S P +
Sbjct: 317 AALSALKAEIARAVPSLPNSAPAPHLEVRRTGEGVLISITDEINFSMFGIGSAEPTPKVV 376
Query: 67 QVLSNLGSWLEKHDCDFLIEGHADELGSR---NSSIALGLRRAYAVFNYFVARGISASRM 123
+ L + L ++ GH D R + L RA V G+ +R+
Sbjct: 377 KALERIAKILNSRPGRIVVRGHTDGRPFRSETYDNWRLSSARAQMASYMLVRGGLDEARI 436
Query: 124 K-VTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+ + Y P + + A+NRR + L+G
Sbjct: 437 ERIEGYADRQPRIAADPKA--AENRRIEILLRG 467
>gi|284042327|ref|YP_003392667.1| OmpA/MotB domain protein [Conexibacter woesei DSM 14684]
gi|283946548|gb|ADB49292.1| OmpA/MotB domain protein [Conexibacter woesei DSM 14684]
Length = 913
Score = 53.7 bits (127), Expect = 8e-06, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 42/106 (39%), Gaps = 2/106 (1%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
+ F T S + PA ++ L + + L+ GH D G ++ ALG RA
Sbjct: 808 IPSDGQFATDSARLLPAGVRHLRRVAADLDG-ARSIRSVGHTDARGDATANRALGRARAA 866
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV R +R+ V S G+ P A NRR + +
Sbjct: 867 AVCAVL-RRAGVRARLPVASAGESRPRADDATPAGRALNRRVELVV 911
>gi|189463929|ref|ZP_03012714.1| hypothetical protein BACINT_00263 [Bacteroides intestinalis DSM
17393]
gi|189438502|gb|EDV07487.1| hypothetical protein BACINT_00263 [Bacteroides intestinalis DSM
17393]
Length = 666
Score = 53.7 bits (127), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 28/132 (21%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
+++F++ + P L L + + + H D G+ + ++ L RRA +
Sbjct: 529 ENIFYEFDRADLTPESTVALDELIQLLNDNPNVTIELSAHCDYKGNDDYNLRLSQRRAES 588
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGH---------------DED------------ 141
V Y + GI + R+ YG++ P + E+
Sbjct: 589 VVRYLIKGGIDSERLTPKGYGEQQPKTVTNFTLKSAPFLKVGDVLTEEFIKNLPLEQQEI 648
Query: 142 AYAKNRRAIVFL 153
A NRR +
Sbjct: 649 CNAINRRTEFKV 660
>gi|167623666|ref|YP_001673960.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis
HAW-EB4]
gi|167353688|gb|ABZ76301.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4]
Length = 245
Score = 53.7 bits (127), Expect = 8e-06, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 63/143 (44%), Gaps = 1/143 (0%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
S+ + + + T L + Q+ ++G +V F T S +I P L+++ +
Sbjct: 98 SLVELSDQYEQAQQQLTSLKMAQEQKLTELALGLNVQFKTGSSTIEPHFQNQLNDIAYAM 157
Query: 77 E-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+ + G+AD G + + AL +R V NY + +G++ +R+ +YG P +
Sbjct: 158 SLSPELTLDLTGYADRRGDGDYNQALSEQRVAEVKNYLIEQGVAEARLHNQAYGDSSPLM 217
Query: 136 YGHDEDAYAKNRRAIVFLKGCRA 158
+ +RR + L+ +
Sbjct: 218 AEQSFENDFFDRRVTLKLQNQES 240
>gi|148862|gb|AAA24941.1| 31 kDa antigen [Histophilus somni]
Length = 273
Score = 53.7 bits (127), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 8/116 (6%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIAL 101
S S+ + FD ++ + + N+ LE I G D LG+ + ++ L
Sbjct: 131 YASFSLNTDLLFDFDQDTLTSKGEEAVDNVAMQLEAFSAKEIKIVGFTDRLGTDSYNLDL 190
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD------EDAYAKNRRAIV 151
RRA V + +G++ + YGK +D +D NRR +
Sbjct: 191 SQRRADRVKERLIEKGLNID-IIAIGYGKTQQIKACNDVPAKELKDCLRPNRRVEI 245
>gi|113460985|ref|YP_719052.1| outer membrane protein [Haemophilus somnus 129PT]
gi|170717551|ref|YP_001784639.1| SmpA/OmlA domain-containing protein [Haemophilus somnus 2336]
gi|112823028|gb|ABI25117.1| outer membrane protein [Haemophilus somnus 129PT]
gi|168825680|gb|ACA31051.1| SmpA/OmlA domain protein [Haemophilus somnus 2336]
Length = 273
Score = 53.7 bits (127), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 8/116 (6%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIAL 101
S S+ + FD ++ + + N+ LE I G D LG+ + ++ L
Sbjct: 131 YASFSLNTDLLFDFDQDTLTSKGEEAVDNVAMQLEAFSAKEIKIVGFTDRLGTDSYNLDL 190
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD------EDAYAKNRRAIV 151
RRA V + +G++ + YGK +D +D NRR +
Sbjct: 191 SQRRADRVKERLIEKGLNID-IIAIGYGKTQQIKACNDVPAKELKDCLRPNRRVEI 245
>gi|86144308|ref|ZP_01062640.1| hypothetical protein MED222_07863 [Vibrio sp. MED222]
gi|85837207|gb|EAQ55319.1| hypothetical protein MED222_07863 [Vibrio sp. MED222]
Length = 182
Score = 53.7 bits (127), Expect = 8e-06, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 49/125 (39%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHA 89
S + + + V ++ + + + + L IEGHA
Sbjct: 57 SEVIQIAAQDDVCFYDKATQSLVLNYPTNVYLLDENHKQVLGQYLSLVGDKSKIYIEGHA 116
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D LGS++ + AL RRA V +Y +R+ +YG+ P D A NRR
Sbjct: 117 DSLGSKSYNKALSSRRAGQVASYLKKDLHQGNRIVEYAYGESAPICKVTDNKATGCNRRV 176
Query: 150 IVFLK 154
++ +K
Sbjct: 177 VITVK 181
>gi|145297581|ref|YP_001140422.1| outer membrane protein A [Aeromonas salmonicida subsp. salmonicida
A449]
gi|142850353|gb|ABO88674.1| outer membrane protein A [Aeromonas salmonicida subsp. salmonicida
A449]
Length = 343
Score = 53.7 bits (127), Expect = 8e-06, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 50/120 (41%), Gaps = 11/120 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
++ V FD + +++P Q L L +E + G+ D +GS + L
Sbjct: 218 TLSSDVLFDFNKATLKPEGGQALDTLYGEIEAARPTDGVATVIGYTDRIGSDAYNQRLSE 277
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDED------AYAKNRRAIVFLKG 155
+RA V +Y V +G+ A ++ V GK P + A +RR V ++G
Sbjct: 278 QRAQTVADYLVGKGLPAGKVNVEGRGKGSPVTGDSCTSKSKHELIVCLAPDRRVEVKVEG 337
>gi|313672972|ref|YP_004051083.1| ompa/motb domain protein [Calditerrivibrio nitroreducens DSM 19672]
gi|312939728|gb|ADR18920.1| OmpA/MotB domain protein [Calditerrivibrio nitroreducens DSM 19672]
Length = 201
Score = 53.7 bits (127), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAV 109
++F+T S + I + + + ++ + + I GH D +G + ++ LGL+RA +V
Sbjct: 96 ILYFETGSDQLTEESINMTKEIINEIKNRENPELEIIGHTDSVGEKEANYLLGLKRAESV 155
Query: 110 FNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
N ++ + ++++S G++ P + DE KNRR V +K
Sbjct: 156 KNILTSQGVDTGMEIELSSLGEDNPLIPMPDETPEPKNRRVEVVVK 201
>gi|153011513|ref|YP_001372727.1| flagellar motor protein MotB [Ochrobactrum anthropi ATCC 49188]
gi|151563401|gb|ABS16898.1| OmpA/MotB domain protein [Ochrobactrum anthropi ATCC 49188]
Length = 371
Score = 53.7 bits (127), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 51/143 (35%), Gaps = 9/143 (6%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSNLGSW 75
+ + + K + P + + + D + F S +Q+L +
Sbjct: 228 AAKEGAEAKKAEPMPDVTVVPVDGGVMIQLTDKIDYGMFTIGSAKPDARVVQMLERIAQV 287
Query: 76 LEKHDCDFLIEGHADELGSR---NSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKE 131
+ + + +I GH D + + L RA + V G+ R ++V Y
Sbjct: 288 ISRQPGEVIISGHTDARPFKSATYDNWRLSSARAQMAYYMLVRGGLDEKRVLRVEGYADR 347
Query: 132 MPSVYGHDEDAYAKNRRAIVFLK 154
P + A+NRR +FLK
Sbjct: 348 QP--KNASDPNAAENRRIDIFLK 368
>gi|228018089|gb|ACP52723.1| fibronectin-binding protein [Campylobacter coli]
gi|228018119|gb|ACP52738.1| fibronectin-binding protein [Campylobacter coli]
gi|228018121|gb|ACP52739.1| fibronectin-binding protein [Campylobacter coli]
gi|228018123|gb|ACP52740.1| fibronectin-binding protein [Campylobacter coli]
gi|228018137|gb|ACP52747.1| fibronectin-binding protein [Campylobacter coli]
Length = 224
Score = 53.7 bits (127), Expect = 8e-06, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FD +I PA + + + E D ++EGH D +GSR+ + L RRA +V
Sbjct: 135 HFDFDKVNINPAFEEQIKEIAQILDENVRYDTILEGHTDNIGSRSYNQKLSERRANSVAK 194
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDED 141
G+ SR++ YG++ P ++
Sbjct: 195 KLEKFGVDKSRIQTVGYGQDKPRSSNDTKE 224
>gi|559851|gb|AAA50841.1| locus involved in self protection to the lipodepsipeptide toxin
tolaasin [Pseudomonas tolaasii]
Length = 163
Score = 53.7 bits (127), Expect = 8e-06, Method: Composition-based stats.
Identities = 35/155 (22%), Positives = 70/155 (45%), Gaps = 6/155 (3%)
Query: 3 YSTIFI--ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
Y+ F+ +L A ++ +++ + + + ++V+F + Y+
Sbjct: 3 YNKFFVKSLLVAGSVAALAACSSRNNDAAGNGAANTFGEYSVANLGQRYNNVYFGYNKYN 62
Query: 61 IRPADIQVLS--NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYF--VAR 116
+ + +L+ + L+ G+ DE + +IAL R A + Y +
Sbjct: 63 LNEGFVNLLNAGHAAYLDANPAGLVLVGGNNDENENPEYNIALEERAADVLKGYVAGKGK 122
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
G+ A + S G+E+P+V GHDE A +KNRRA++
Sbjct: 123 GVDAGLLGNVSNGEELPAVLGHDEAACSKNRRAVL 157
>gi|228018109|gb|ACP52733.1| fibronectin-binding protein [Campylobacter coli]
gi|228018111|gb|ACP52734.1| fibronectin-binding protein [Campylobacter coli]
gi|228018113|gb|ACP52735.1| fibronectin-binding protein [Campylobacter coli]
Length = 223
Score = 53.7 bits (127), Expect = 8e-06, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FD +I PA + + + E D ++EGH D +GSR+ + L RRA +V
Sbjct: 134 HFDFDKVNINPAFEEQIKEIAQILDENVRYDTILEGHTDNIGSRSYNQKLSERRANSVAK 193
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDED 141
G+ SR++ YG++ P ++
Sbjct: 194 ELEKFGVDKSRIQTVGYGQDKPRSSNDTKE 223
>gi|228018097|gb|ACP52727.1| fibronectin-binding protein [Campylobacter coli]
Length = 224
Score = 53.7 bits (127), Expect = 8e-06, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FD +I PA + + + E D ++EGH D +GSR+ + L RRA +V
Sbjct: 135 HFDFDKVNINPAFEEQIKEIAQILDENVRYDTILEGHTDNIGSRSYNQKLSERRANSVAK 194
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDED 141
G+ SR++ YG++ P ++
Sbjct: 195 ELEKFGVDKSRIQTVGYGQDKPRSSNDTKE 224
>gi|228018087|gb|ACP52722.1| fibronectin-binding protein [Campylobacter coli]
Length = 224
Score = 53.7 bits (127), Expect = 8e-06, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FD +I PA + + + E D ++EGH D +GSR+ + L RRA +V
Sbjct: 135 HFDFDKVNINPAFEEQIKEIAQILDENVRYDTILEGHTDNIGSRSYNQKLSERRANSVAK 194
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDED 141
G+ SR++ YG++ P ++
Sbjct: 195 ELEKFGVDKSRIQTVGYGQDKPRSSNDTKE 224
>gi|228018083|gb|ACP52720.1| fibronectin-binding protein [Campylobacter coli]
gi|228018091|gb|ACP52724.1| fibronectin-binding protein [Campylobacter coli]
gi|228018093|gb|ACP52725.1| fibronectin-binding protein [Campylobacter coli]
gi|228018101|gb|ACP52729.1| fibronectin-binding protein [Campylobacter coli]
gi|228018103|gb|ACP52730.1| fibronectin-binding protein [Campylobacter coli]
gi|228018105|gb|ACP52731.1| fibronectin-binding protein [Campylobacter coli]
gi|228018107|gb|ACP52732.1| fibronectin-binding protein [Campylobacter coli]
gi|228018115|gb|ACP52736.1| fibronectin-binding protein [Campylobacter coli]
gi|228018117|gb|ACP52737.1| fibronectin-binding protein [Campylobacter coli]
gi|228018125|gb|ACP52741.1| fibronectin-binding protein [Campylobacter coli]
gi|228018127|gb|ACP52742.1| fibronectin-binding protein [Campylobacter coli]
gi|228018129|gb|ACP52743.1| fibronectin-binding protein [Campylobacter coli]
gi|228018131|gb|ACP52744.1| fibronectin-binding protein [Campylobacter coli]
gi|228018133|gb|ACP52745.1| fibronectin-binding protein [Campylobacter coli]
gi|228018135|gb|ACP52746.1| fibronectin-binding protein [Campylobacter coli]
Length = 224
Score = 53.7 bits (127), Expect = 8e-06, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FD +I PA + + + E D ++EGH D +GSR+ + L RRA +V
Sbjct: 135 HFDFDKVNINPAFEEQIKEIAQILDENVRYDTILEGHTDNIGSRSYNQKLSERRANSVAK 194
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDED 141
G+ SR++ YG++ P ++
Sbjct: 195 ELEKFGVDKSRIQTVGYGQDKPRSSNDTKE 224
>gi|149371838|ref|ZP_01891157.1| outer membrane protein, peptidoglycan-associated lipoprotein
[unidentified eubacterium SCB49]
gi|149354978|gb|EDM43539.1| outer membrane protein, peptidoglycan-associated lipoprotein
[unidentified eubacterium SCB49]
Length = 647
Score = 53.7 bits (127), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 44/111 (39%), Gaps = 7/111 (6%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYA 108
+ ++FD IR L + +++K+ + H D S + L RR
Sbjct: 535 NMIYFDLDKDFIRADAQIELQKVIKYMKKYPNLKIDVRSHTDSRNSHAYNEDLSSRRNKN 594
Query: 109 VFNYFVARG-ISASRMKVTSYGKEMPSVYGHD-----EDAYAKNRRAIVFL 153
Y V G ISA+R+ YG+ + + D E + NRR+ +
Sbjct: 595 TIAYIVNHGGISAARLTGRGYGETQLTNHCSDGVQCSEALHQLNRRSEFII 645
>gi|260431085|ref|ZP_05785056.1| OmpA family protein [Silicibacter lacuscaerulensis ITI-1157]
gi|260414913|gb|EEX08172.1| OmpA family protein [Silicibacter lacuscaerulensis ITI-1157]
Length = 209
Score = 53.7 bits (127), Expect = 8e-06, Method: Composition-based stats.
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 15/149 (10%)
Query: 1 MQYSTIFIILSAITMMSIS------------GIDNLDTKISSPDTVLNESSLQEQFSSSV 48
M I + LS + + + G L+ + L ++F++ V
Sbjct: 1 MNKWIITLGLS-VAVAGCTREAGYEIDQGAFGNATLNNIQVMNGELTYGQILAQRFAAEV 59
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAY 107
+ F S + + ++L +W+++ F + GH D +GS++ + LGLRRA
Sbjct: 60 PSQINFAFDSAQLDASAQRILLQQANWIKQFPEARFRVYGHTDAVGSQSYNYNLGLRRAN 119
Query: 108 AVFNYFVARGISASRMKV-TSYGKEMPSV 135
AV N+ V +GIS SR++ S+GK P V
Sbjct: 120 AVVNFLVQQGISRSRLEALVSFGKTRPLV 148
>gi|148554155|ref|YP_001261737.1| OmpA/MotB domain-containing protein [Sphingomonas wittichii RW1]
gi|148499345|gb|ABQ67599.1| OmpA/MotB domain protein [Sphingomonas wittichii RW1]
Length = 196
Score = 53.7 bits (127), Expect = 8e-06, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 57/142 (40%), Gaps = 1/142 (0%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+ ++SG + + + LQ + V +++F + + P L+ L
Sbjct: 55 SSTNLSGTPRTRSIDPAKMSARQRELLQALPPAPVRLTLYFLEGTTELTPESQPGLAFLI 114
Query: 74 SWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
+ E+ + + G+ D LG +++ L +RA V +GI + M G+
Sbjct: 115 KEVSERPGAEVQVTGYTDTLGEADANDRLSQQRAEEVLGVLAKQGIDPTLMSAVGRGERN 174
Query: 133 PSVYGHDEDAYAKNRRAIVFLK 154
V D + NRR +V ++
Sbjct: 175 LRVATPDGVSEPANRRVVVTIR 196
>gi|254780953|ref|YP_003065366.1| OmpA/MotB [Candidatus Liberibacter asiaticus str. psy62]
gi|254040630|gb|ACT57426.1| OmpA/MotB [Candidatus Liberibacter asiaticus str. psy62]
Length = 190
Score = 53.7 bits (127), Expect = 9e-06, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 64 ADIQVLSNLGSWLEKHDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASR 122
+ +L + + L K + I+ H D +G+ +++ + RA + +Y + RG+S++R
Sbjct: 91 KFLPMLQLIATILNKFPSTVIAIQSHTDSIGTLKNNLLISQERADVIKSYLIQRGVSSNR 150
Query: 123 -MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ V + + P + N+R + +
Sbjct: 151 FISVRGFAYKYPIDTNDTKVGRQNNQRIEIQI 182
>gi|320531947|ref|ZP_08032850.1| OmpA family protein [Actinomyces sp. oral taxon 171 str. F0337]
gi|320135840|gb|EFW27885.1| OmpA family protein [Actinomyces sp. oral taxon 171 str. F0337]
Length = 227
Score = 53.7 bits (127), Expect = 9e-06, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 48/125 (38%), Gaps = 8/125 (6%)
Query: 34 VLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADEL 92
+ SS + +S+ V FD S ++ QVL ++ K + GH D +
Sbjct: 101 AVTYSSDGQTTVASLSGDVTFDVDSSALTDRAKQVLDDIVKRWNGKPPATVTVVGHTDSV 160
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH------DEDAYAKN 146
+ L +RA AV +Y ++ + ++ + G+ P +E A N
Sbjct: 161 ADDAHNQTLSEQRAKAVADYLTSKVP-SLNVQSSGKGESEPVASETNADGSVNEAGKAAN 219
Query: 147 RRAIV 151
R V
Sbjct: 220 RHVDV 224
>gi|315186730|gb|EFU20488.1| OmpA/MotB domain protein [Spirochaeta thermophila DSM 6578]
Length = 826
Score = 53.7 bits (127), Expect = 9e-06, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 24/55 (43%)
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L RA AV ++RG+ SR+ + YG P V D NRR LK
Sbjct: 767 PLSRARAEAVRKALISRGVDPSRLSIVGYGGSRPIVPFSDLKKRWVNRRVEFLLK 821
>gi|89053189|ref|YP_508640.1| OmpA/MotB [Jannaschia sp. CCS1]
gi|88862738|gb|ABD53615.1| OmpA/MotB [Jannaschia sp. CCS1]
Length = 195
Score = 53.7 bits (127), Expect = 9e-06, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 36/100 (36%), Gaps = 4/100 (4%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F + S + + Q L + + I GH D S ++ L RRA AV N
Sbjct: 97 MFQSGSARLTGSGRQYLQQFFAGAGAYAY--AIYGHTDSRASDEYNMRLSERRAAAVANV 154
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ G +R YG+ P +NRR +
Sbjct: 155 ARSVGARVAR--EIGYGERRPVAPNDSAANMQRNRRVEIV 192
>gi|218676259|ref|YP_002395078.1| Outer membrane protein [Vibrio splendidus LGP32]
gi|218324527|emb|CAV26009.1| Outer membrane protein [Vibrio splendidus LGP32]
Length = 188
Score = 53.7 bits (127), Expect = 9e-06, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 49/125 (39%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHA 89
S + + + V ++ + + + + L IEGHA
Sbjct: 63 SEVIQIAAQDDVCFYDKATQSLVLNYPTNVYLLDENHKQVLGQYLSLVGDKSKIYIEGHA 122
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D LGS++ + AL RRA V +Y +R+ +YG+ P D A NRR
Sbjct: 123 DSLGSKSYNKALSSRRAGQVASYLKKDLHQGNRIVEYAYGESAPICKVTDNKATGCNRRV 182
Query: 150 IVFLK 154
++ +K
Sbjct: 183 VITVK 187
>gi|226944060|ref|YP_002799133.1| outer membrane protein, OmpA/MotB family [Azotobacter vinelandii
DJ]
gi|226718987|gb|ACO78158.1| outer membrane protein, OmpA/MotB family [Azotobacter vinelandii
DJ]
Length = 215
Score = 53.7 bits (127), Expect = 9e-06, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 34/77 (44%)
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ + L+ GH D GS + L RA ++ F G+ R+ G ++P
Sbjct: 111 QDREVAVLLLGHGDSSGSAELTNRLSQERAQSMAAIFRMSGLHHDRLMYKGMGSDVPRSS 170
Query: 137 GHDEDAYAKNRRAIVFL 153
++D + NRR ++L
Sbjct: 171 NANKDGRSLNRRVEMYL 187
>gi|306841271|ref|ZP_07473982.1| flagellar motor protein MotB [Brucella sp. BO2]
gi|306845424|ref|ZP_07477998.1| flagellar motor protein MotB [Brucella sp. BO1]
gi|306274167|gb|EFM55983.1| flagellar motor protein MotB [Brucella sp. BO1]
gi|306288673|gb|EFM60004.1| flagellar motor protein MotB [Brucella sp. BO2]
Length = 366
Score = 53.7 bits (127), Expect = 9e-06, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 48/142 (33%), Gaps = 9/142 (6%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSNLGSWL 76
+ P + ++ + D V F S +Q+L + +
Sbjct: 224 AQNAGKAAKPEPMPDVTVVPVEGGVMIQLTDKVDYGMFTIGSAKPDARVVQMLERIAQVI 283
Query: 77 EKHDCDFLIEGHADELGSR---NSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEM 132
+ + +I GH D + + L RA + V G+ R ++V Y
Sbjct: 284 ARQPGEVIISGHTDARPFKSATYDNWRLSSARAQMAYYMLVRGGLDEKRVLRVEGYADRQ 343
Query: 133 PSVYGHDEDAYAKNRRAIVFLK 154
P + A+NRR +F+K
Sbjct: 344 P--KNPTDPNAAENRRIDIFIK 363
>gi|207108745|ref|ZP_03242907.1| flagellar motor protein MotB [Helicobacter pylori HPKX_438_CA4C1]
Length = 150
Score = 53.7 bits (127), Expect = 9e-06, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 36/103 (34%), Gaps = 6/103 (5%)
Query: 58 SYSIRPADIQVLSNLGSWLEKHDCDFLIE--GHADELG----SRNSSIALGLRRAYAVFN 111
S +I + L + ++K I G D+ S L RAY V
Sbjct: 21 SDAINQDMMLYLERIAKIIQKLPKRVHINVRGFTDDTPLVKTRFKSHYELAANRAYRVMK 80
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ G+ +++ +SYG P + KN R +F
Sbjct: 81 VLIQYGVDPNQLSFSSYGSTNPIAPNDSLENRMKNNRVEIFFS 123
>gi|298208824|ref|YP_003717003.1| putative flagellar motor protein MotB [Croceibacter atlanticus
HTCC2559]
gi|83848751|gb|EAP86620.1| putative flagellar motor protein MotB [Croceibacter atlanticus
HTCC2559]
Length = 280
Score = 53.7 bits (127), Expect = 9e-06, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 49/140 (35%), Gaps = 7/140 (5%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
++ D ++ + + SV D + F++ SY + +L L + +
Sbjct: 126 TKSMRENFDGNDEDIDVNIDETVVMISVSDKLLFNSGSYRVSNKANSLLERLAAVINSEP 185
Query: 81 -CDFLIEGHADELG-----SRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMP 133
+ +IEGH D+ + L RA A+ ++ +M P
Sbjct: 186 AIEVMIEGHTDDRTVKQGSYIKDNWDLSTERATAIIRKLADDYNVAPEKMIAAGRSSYKP 245
Query: 134 SVYGHDEDAYAKNRRAIVFL 153
V + A NRR + +
Sbjct: 246 LVANDSNENRAANRRTRILI 265
>gi|296282332|ref|ZP_06860330.1| putative outer membrane lipoprotein [Citromicrobium bathyomarinum
JL354]
Length = 238
Score = 53.7 bits (127), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 42/116 (36%), Gaps = 3/116 (2%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADELGSRNS 97
E ++ F+ SS P ++L L + + + I GH D GS
Sbjct: 108 CESELLGVLAERTIRFEESSAEFIPGSEELLDELATAMRPCVGAIVAISGHTDTSGSPKV 167
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++AL RA V + RGI + +G P G A NRR +
Sbjct: 168 NLALSQDRAQMVRRELIERGIPGQNLIANGFGSSRPV-EGLSPADPA-NRRIEFRV 221
>gi|327403146|ref|YP_004343984.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
16823]
gi|327318654|gb|AEA43146.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
Length = 249
Score = 53.7 bits (127), Expect = 9e-06, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 43/120 (35%), Gaps = 3/120 (2%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ E L + + V ++ F+ ++ ++ I L L D + +
Sbjct: 128 SAKQEKPLVFELNKPVNLNINFENANAVVKAESIPNLEKL---NRILLEDTSLFVRLNGH 184
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
S+ L +RA V Y + GI SR+ + V + E+ A NRR
Sbjct: 185 VCCTSAQELSFQRANTVMTYLLKHGIPQSRIYAEGFSNTQLLVPDNSEENMAINRRVEAI 244
>gi|94499424|ref|ZP_01305961.1| OmpA family protein [Oceanobacter sp. RED65]
gi|94428178|gb|EAT13151.1| OmpA family protein [Oceanobacter sp. RED65]
Length = 465
Score = 53.7 bits (127), Expect = 9e-06, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 49/136 (36%), Gaps = 9/136 (6%)
Query: 25 DTKISSPDTVLNESSLQEQFS-----SSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EK 78
+ + D L + Q+ + + + F S + ++ + L ++ E
Sbjct: 333 SQNVEAMDVALPDELPQDYLAMVKNAKRLSINFRFKEGSAKLDNKALKDIQRLAYYMTEH 392
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ ++ G D ++ S L RA AV GI + YG+ P
Sbjct: 393 PQQELVLIGFGDRRKNKERSKLLSKLRAMAVRRELSRLGIYPD--EAEGYGEYNPVAAFE 450
Query: 139 DEDAYAKNRRAIVFLK 154
A KNRR V+L+
Sbjct: 451 QSAA-TKNRRVEVWLR 465
>gi|288801512|ref|ZP_06406964.1| OmpA family protein [Prevotella sp. oral taxon 299 str. F0039]
gi|288331593|gb|EFC70079.1| OmpA family protein [Prevotella sp. oral taxon 299 str. F0039]
Length = 674
Score = 53.3 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 48/137 (35%), Gaps = 28/137 (20%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGL 103
+ + D++F+D ++RP L L E + + H D GS + L
Sbjct: 500 APVLIDNIFYDFDKATLRPESTTSLDELVKLLNENPNVTIELSAHTDYRGSEEYNKKLSQ 559
Query: 104 RRAYAVFNYFVARGISASRMKVTSYG------------KEMP---------------SVY 136
+RA AV NY +A GIS+ R+ YG ++ P
Sbjct: 560 KRAEAVVNYLIAHGISSERLTPVGYGKEKPKKIKKKLTEKYPWLKEDSALTESFIQSLDK 619
Query: 137 GHDEDAYAKNRRAIVFL 153
E NRR +
Sbjct: 620 EKQEICNQLNRRTEFIV 636
>gi|148976136|ref|ZP_01812879.1| outer membrane protein [Vibrionales bacterium SWAT-3]
gi|145964531|gb|EDK29785.1| outer membrane protein [Vibrionales bacterium SWAT-3]
Length = 277
Score = 53.3 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 1/116 (0%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNS 97
S+ +Q + F +S + P + L+ L+ + + ++ GH+D GS
Sbjct: 149 SIIQQLYDLLNVDNQFAHNSIEVNPKYMGKLAEASYILKDNKSLELIVTGHSDATGSEEY 208
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L L RA V Y G+S SR+K S G+ +P G E NRR + +
Sbjct: 209 NDKLALGRAQQVERYLTIFGLSPSRIKAVSVGETVPLFEGESEGTRLTNRRVSIEV 264
>gi|114327495|ref|YP_744652.1| outer membrane protein [Granulibacter bethesdensis CGDNIH1]
gi|114315669|gb|ABI61729.1| outer membrane protein [Granulibacter bethesdensis CGDNIH1]
Length = 149
Score = 53.3 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 42/101 (41%), Gaps = 7/101 (6%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+FF + + + +L ++ + H + ++ G+ D +GS + L RA +
Sbjct: 50 IFFAPDASQPKTDSLPILKVAVTYAKDHPDQNIIVVGYTDPVGSAKDNHDLSEERADTIR 109
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ GI +R+ +G+ P E ++RR +
Sbjct: 110 KDLIKAGIPQARITARGHGQTQP------EWNNQESRRVEI 144
>gi|298370128|ref|ZP_06981444.1| OmpA family protein [Neisseria sp. oral taxon 014 str. F0314]
gi|298281588|gb|EFI23077.1| OmpA family protein [Neisseria sp. oral taxon 014 str. F0314]
Length = 298
Score = 53.3 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 43/141 (30%), Gaps = 16/141 (11%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD------CDFLIE 86
V + Q ++ S F + Q + + + +
Sbjct: 158 VVSKDKCAQVLKKYNLQASALFKFDRSGYQDMLEQGKREVSTISQDIKQNPAAVTSVNVV 217
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG------HDE 140
GH D G + AL ++RA V + G+ + + G+ V +
Sbjct: 218 GHTDPEGKPEYNDALSVKRAQTVKQALSSSGLDGNIISTQGKGERELVVTNCRKRFPKNA 277
Query: 141 DAYAK----NRRAIVFLKGCR 157
A K NRR + L G +
Sbjct: 278 KAREKCDQPNRRVEIILHGEK 298
>gi|228472824|ref|ZP_04057582.1| OmpA/MotB domain protein [Capnocytophaga gingivalis ATCC 33624]
gi|228275875|gb|EEK14641.1| OmpA/MotB domain protein [Capnocytophaga gingivalis ATCC 33624]
Length = 393
Score = 53.3 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 52/128 (40%), Gaps = 2/128 (1%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIE 86
S+ + +V+FD +S + + + + + ++L+++
Sbjct: 267 GSNAQNKYATGDAARELIEKGYINVYFDFNSSKPQKSSLWAVDFVANYLKQNSGASVNAV 326
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
G+ADE GS N + L +RA + V RGI+AS++ G++ A
Sbjct: 327 GYADEKGSENYNQKLSAKRAEVIKQLLVDRGINASQLSFEGKGEDKTVNANSSN-ARQLA 385
Query: 147 RRAIVFLK 154
RR LK
Sbjct: 386 RRVTFELK 393
>gi|254695098|ref|ZP_05156926.1| flagellar motor protein MotB [Brucella abortus bv. 3 str. Tulya]
gi|261215449|ref|ZP_05929730.1| flagellar motor protein MotB [Brucella abortus bv. 3 str. Tulya]
gi|260917056|gb|EEX83917.1| flagellar motor protein MotB [Brucella abortus bv. 3 str. Tulya]
Length = 366
Score = 53.3 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 49/140 (35%), Gaps = 7/140 (5%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+G + V E + Q + V D F S +Q+L + + +
Sbjct: 227 AGKAAKPEPMPDVTVVPVEGGVMSQLTDKV-DYGMFTIGSAKPDARVVQMLERIAQVIAR 285
Query: 79 HDCDFLIEGHADELGSR---NSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPS 134
+ +I GH D + + L RA + V G+ R ++V Y P
Sbjct: 286 QPGEVIISGHTDARPFKSATYDNWRLSSARAQMAYYMLVRGGLDEKRVLRVEGYADRHPK 345
Query: 135 VYGHDEDAYAKNRRAIVFLK 154
A+NRR +F+K
Sbjct: 346 NPNDPNA--AENRRIDIFIK 363
>gi|197336843|ref|YP_002157778.1| chemotaxis MotB protein [Vibrio fischeri MJ11]
gi|197314095|gb|ACH63544.1| chemotaxis MotB protein [Vibrio fischeri MJ11]
Length = 213
Score = 53.3 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 53/131 (40%), Gaps = 9/131 (6%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHA 89
+ +++ + + +D+ S S++P ++S +++ D + ++EGH+
Sbjct: 81 DSVVVTAVTDGIRIDLDSENLYDSGSASLKPEGKALISEFAEAMKEVDLNGRSIIVEGHS 140
Query: 90 DELGSRNSS----IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH--DEDAY 143
D+L L RA V + + S+++ +Y P E
Sbjct: 141 DDLPIHTKQFDSNWELSGARAIEVTKQLIKFNVDKSQLRAVAYADAQPRADKALPIEQQR 200
Query: 144 AKNRRAIVFLK 154
NRR ++++K
Sbjct: 201 QLNRRVVIYIK 211
>gi|116693955|ref|YP_839488.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
HI2424]
gi|116651955|gb|ABK12595.1| OmpA/MotB domain protein [Burkholderia cenocepacia HI2424]
Length = 103
Score = 53.3 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 83 FLIEGHADELG----SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ G+ D + SR ++ AL RA V F A G+ + T G P
Sbjct: 27 VQVVGYTDNVPAGAISRGNNQALSEARAREVARIFAAAGVPMQNISATGQGDADPLADNG 86
Query: 139 DEDAYAKNRRAIVFLKG 155
++NRR V +
Sbjct: 87 TAPGRSRNRRVEVTVSN 103
>gi|146300670|ref|YP_001195261.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
UW101]
gi|146155088|gb|ABQ05942.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
Length = 277
Score = 53.3 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/147 (14%), Positives = 63/147 (42%), Gaps = 7/147 (4%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
++++ + +L + D + + + S+ D + F + SY + VL+ +
Sbjct: 112 SVTLALVTSLKGAVGINDPDIEVNVEKGVVFISIADKLLFKSGSYDVSDKAKSVLAKVAK 171
Query: 75 WLEKHD-CDFLIEGHADELGSRNS-----SIALGLRRAYAVFNYFVA-RGISASRMKVTS 127
+ + ++EGH D++ +++ + L ++R+ ++ G++ +++
Sbjct: 172 VVNDKPDFECMVEGHTDDVPYKSNGVILDNWDLSVKRSTSIVRVLTNDLGVNPAKLIAAG 231
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+P V + A+NRR + +
Sbjct: 232 RSSYVPLVANDSAENKARNRRTRIVVM 258
>gi|71908258|ref|YP_285845.1| OmpA/MotB [Dechloromonas aromatica RCB]
gi|71847879|gb|AAZ47375.1| OmpA/MotB [Dechloromonas aromatica RCB]
Length = 225
Score = 53.3 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/140 (15%), Positives = 45/140 (32%), Gaps = 4/140 (2%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS--SYSIRPADIQVLSNLG 73
S+ +D + + ++ + ++ S + PA L+ +
Sbjct: 78 SSVRTVDRATSSSPAHPIASEPTTPLPTPKTDTSRTITIQFGLGSAKLSPAAHTSLNEVM 137
Query: 74 SWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEM 132
+ L I G D G + +L L RA AV ++ + + + V + G
Sbjct: 138 TAL-LSARQITIIGRTDNTGPLAFNESLALARALAVRDHLIKKYPRLMPTLSVKARGACC 196
Query: 133 PSVYGHDEDAYAKNRRAIVF 152
+NRR +
Sbjct: 197 FIAANDTLAGRTQNRRVELV 216
>gi|308049988|ref|YP_003913554.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
gi|307632178|gb|ADN76480.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
Length = 285
Score = 53.3 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 35/72 (48%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
L + + D S+ ++ A+ ++A + +Y V GIS R+ T++G++
Sbjct: 213 VLTDTYTDNHRSKATNQAITEQQANTLRSYLVQSGISEERIIATAHGEQRHIANNRTTRG 272
Query: 143 YAKNRRAIVFLK 154
NRR +V ++
Sbjct: 273 RDLNRRVVVRVE 284
>gi|90422620|ref|YP_530990.1| flagellar motor protein MotB [Rhodopseudomonas palustris BisB18]
gi|90104634|gb|ABD86671.1| OmpA/MotB [Rhodopseudomonas palustris BisB18]
Length = 423
Score = 53.3 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 51/143 (35%), Gaps = 9/143 (6%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSNLGSW 75
+ I + + V E S+ D V F T S + P ++ L +
Sbjct: 279 ATITAALATLGAARPVTEVRETTEGLLISLTDDVNYGMFATGSAAPSPGLVRALDKITPL 338
Query: 76 LEKHDCDFLIEGHADELGSR---NSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKE 131
+ ++ ++ GH D R + L RA+ + + G+ A R++ + Y
Sbjct: 339 IAQNRGQMIVRGHTDNRAYRSAEYDNWRLSTARAHMAYYMLIRGGLDAGRIERIEGYADR 398
Query: 132 MPSVYGHDEDAYAKNRRAIVFLK 154
P A NRR + ++
Sbjct: 399 RPKDPNDPSA--APNRRIELLIR 419
>gi|269104725|ref|ZP_06157421.1| outer membrane protein [Photobacterium damselae subsp. damselae CIP
102761]
gi|268161365|gb|EEZ39862.1| outer membrane protein [Photobacterium damselae subsp. damselae CIP
102761]
Length = 188
Score = 53.3 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/139 (17%), Positives = 46/139 (33%), Gaps = 1/139 (0%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
D + + V F S I + L +LE
Sbjct: 37 DKCADTPLGAVVDNDGCPTYVKTDEKNSVHVLFANDSTVIPETYMAQLKKTAQFLETFPE 96
Query: 82 D-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
++G+A +G+ + L RA V + G++A R+K +G P E
Sbjct: 97 THIELKGYASPVGNSAHNQYLSDTRAANVRQQLIDFGVAADRIKTVGFGDADPIQAETSE 156
Query: 141 DAYAKNRRAIVFLKGCRAN 159
+ +RR + + G + +
Sbjct: 157 ASNTLSRRVVAQVVGSKGH 175
>gi|262198303|ref|YP_003269512.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
gi|262081650|gb|ACY17619.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
Length = 170
Score = 53.3 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 19/165 (11%)
Query: 1 MQYST--IFIILSAITMMSISGIDNLDT-----------KISSPDTVLNESSLQEQFSSS 47
M+ ST I + ++ + + S++ + P ++ +
Sbjct: 1 MRTSTLRILLSIAYLGLFSLAACGGSSASSDDSTTPEFREDEEPLASDEMAASPGEEQIE 60
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRA 106
VFF S + P L ++ +WL ++ +IEGHAD G+ + + L +RA
Sbjct: 61 PESRVFFALDSAELTPLAQSELEDVAAWLVDNEERELVIEGHADPQGAADYNQELSEKRA 120
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
AV+ + + +GI A RM+ ++G+ DE Y+ NRRA++
Sbjct: 121 IAVYQFLLDQGIPAERMERRAFGESE-----ADEAPYSINRRALI 160
>gi|121582538|ref|YP_974070.1| OmpA/MotB domain-containing protein [Acidovorax sp. JS42]
gi|120608596|gb|ABM44335.1| OmpA/MotB domain protein [Acidovorax sp. JS42]
Length = 347
Score = 53.3 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 53/141 (37%), Gaps = 3/141 (2%)
Query: 14 TMMSISGIDNLDTKISSP-DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL 72
+ + S D + + + + ++ + +S+ S+ F ++ + + LS L
Sbjct: 202 AIPAGSAQLTDDVQPVTVIASGPSVTTPVTETASTPLRSIPFPSAVAILNDDAKRGLSEL 261
Query: 73 GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
L I G D G+ + AL + RA V F + G+ ++K SY
Sbjct: 262 -LPLAMKAERVFIRGRTDSTGTVAGNRALAIARAATVRAAFASGGVDPRKLK-VSYCVTC 319
Query: 133 PSVYGHDEDAYAKNRRAIVFL 153
E + NRR V L
Sbjct: 320 FVASNDTEAGRSANRRVEVEL 340
>gi|58039713|ref|YP_191677.1| Outer membrane protein [Gluconobacter oxydans 621H]
gi|58002127|gb|AAW61021.1| Outer membrane protein [Gluconobacter oxydans 621H]
Length = 370
Score = 53.3 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 38/107 (35%), Gaps = 7/107 (6%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRN------SSIALGLR 104
VFFD S + V++ + G+ D + ++AL R
Sbjct: 261 VFFDWDSAELSTRAKAVVAAAARNSTSVQVTHIEVSGYTDTSAAHPGHRGEAYNMALSQR 320
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA V V G++A + +G+ P V +NRR +
Sbjct: 321 RANTVKEELVRDGVAAGLITTQGFGESHPLVVTAANTREPQNRRVEI 367
>gi|153003288|ref|YP_001377613.1| OmpA/MotB family outer membrane protein [Anaeromyxobacter sp.
Fw109-5]
gi|152026861|gb|ABS24629.1| outer membrane protein, OmpA/MotB family [Anaeromyxobacter sp.
Fw109-5]
Length = 385
Score = 53.3 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 22/71 (30%)
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
IE D R L A G++ +R+ + G E P +
Sbjct: 311 VTVRIEAFVDASDDRAGDGKLSEEMARTAGERLHQLGVARARLAWSGRGGESPLLPNFTA 370
Query: 141 DAYAKNRRAIV 151
A NRR V
Sbjct: 371 RGRAANRRIEV 381
>gi|218511064|ref|ZP_03508942.1| hypothetical conserved membrane protein [Rhizobium etli Brasil 5]
Length = 106
Score = 53.3 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 38/103 (36%), Gaps = 4/103 (3%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAV 109
V S +I P +L L S +++ D I GH D G + L + RA V
Sbjct: 2 RVQLAFDSSAIAPKQKPMLQKLCSVVKEMDIKLIRIVGHTDASGGARYNQNLSMLRAREV 61
Query: 110 FNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+F R++ G++ P + +NRR
Sbjct: 62 ARFFTEDCHIPPERLEAVGVGEQFPLDPQKPKAD--ENRRVEF 102
>gi|329755864|gb|AEC04329.1| outer membrane protein A [Pasteurella multocida]
Length = 351
Score = 53.3 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 50/121 (41%), Gaps = 10/121 (8%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLG-SWLEKHDCDFLIEGHADELGSRNSSIALGLRR 105
++ V F ++PA VL + + + G+ D LGS ++ L RR
Sbjct: 231 TLNSDVTFGFDKADLKPAAQNVLDGIYGEIAQLKSASVAVAGYTDRLGSDAYNLKLSQRR 290
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE---------DAYAKNRRAIVFLKGC 156
A V NY VA+G++ + + T +G+ P + A +R V +KG
Sbjct: 291 ADTVANYLVAKGVAQNAISATGHGEANPVTGNKCDAVKGRKALIACLADDRPVEVAVKGN 350
Query: 157 R 157
+
Sbjct: 351 K 351
>gi|188579997|ref|YP_001923442.1| OmpA/MotB domain protein [Methylobacterium populi BJ001]
gi|179343495|gb|ACB78907.1| OmpA/MotB domain protein [Methylobacterium populi BJ001]
Length = 282
Score = 53.3 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/138 (27%), Positives = 51/138 (36%), Gaps = 6/138 (4%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
G + SL+ + SV +VFF S + P L LG L+
Sbjct: 99 GNPGRPAAPVAVSPGDGGPSLRVDPARSVDLTVFFAYDSARLTPEARIQLEPLGQALQSR 158
Query: 80 DCD---FLIEGHADELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSV 135
+ FLI GH D G + L L RA AV + GI R+++ +G P
Sbjct: 159 ELAGHGFLIAGHTDAAGGLGYNRRLSLARARAVRAHLAETYGIDPHRLRIHGWGPGRPKD 218
Query: 136 YGHDEDAYAKNRRAIVFL 153
A NRR V L
Sbjct: 219 PAR-PFAR-INRRVEVSL 234
>gi|91218366|ref|ZP_01255310.1| putative flagellar motor protein MotB [Psychroflexus torquis ATCC
700755]
gi|91183504|gb|EAS69903.1| putative flagellar motor protein MotB [Psychroflexus torquis ATCC
700755]
Length = 277
Score = 53.3 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 54/139 (38%), Gaps = 7/139 (5%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDC 81
N+ + + LN S + ++ D++ F SS+ + ++LS + +
Sbjct: 126 NISKNMGESGSDLNISIEETMVKINIDDNLLFGDSSFRVGSDADEILSRIAKVLNSEPSL 185
Query: 82 DFLIEGHADELG-----SRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSV 135
+ L+EGH D + L RR+ A+ + + ++ V P V
Sbjct: 186 EVLVEGHTDSRTIKKDSYIIDNWDLSARRSAAIVRRLENKFGVASDQLIVAGRSSYDPLV 245
Query: 136 YGHDEDAYAKNRRAIVFLK 154
+D AKNRR + +
Sbjct: 246 PNDTKDNMAKNRRTQIVIM 264
>gi|54302595|ref|YP_132588.1| hypothetical protein PBPRB0916 [Photobacterium profundum SS9]
gi|46916019|emb|CAG22788.1| hypothetical protein PBPRB0916 [Photobacterium profundum SS9]
Length = 208
Score = 53.3 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/188 (16%), Positives = 70/188 (37%), Gaps = 38/188 (20%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSV-------------- 48
+++ I++S + + + + + + + N + +
Sbjct: 8 FTSSIILISCVFLFACTTTSEQKSDSVTGKSQGNTENTTSSLNIYTSSNELNTSRNSAVV 67
Query: 49 ----------------------GDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLI 85
+ ++FD +Y + + Q+L + L+ H D ++
Sbjct: 68 TDSITYTATPDASILLAQLPEQKEVIYFDNMNYELSVKNQQLLDPIALRLKLHLDSYLIV 127
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYA 144
GH+D+ GS+ ++ L RA++V Y + GI R+++ + G + G+ E
Sbjct: 128 IGHSDDAGSKEENLVLSFERAFSVAIYISSVFGIEEERIQIVALGDDELISNGNSEQERR 187
Query: 145 KNRRAIVF 152
NRR V
Sbjct: 188 LNRRVEVI 195
>gi|167950653|ref|ZP_02537727.1| OmpA domain protein [Endoriftia persephone 'Hot96_1+Hot96_2']
Length = 62
Score = 53.3 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 25/56 (44%)
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ L RRA V +Y G++A R+ +G+E P + NRRA +
Sbjct: 4 YNKDLSHRRAITVMHYLSDNGVAAERLSAEGFGEEQPISDNESLEGQTMNRRAELI 59
>gi|170748097|ref|YP_001754357.1| OmpA/MotB domain-containing protein [Methylobacterium radiotolerans
JCM 2831]
gi|170654619|gb|ACB23674.1| OmpA/MotB domain protein [Methylobacterium radiotolerans JCM 2831]
Length = 401
Score = 53.3 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 50/155 (32%), Gaps = 9/155 (5%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPAD 65
+ SA + + + + E +V D + F S RP
Sbjct: 247 VASAAALKAEIAKIFPPPAPGTSGPRVEVQGTPEGLLINVTDDLNFSMFAVGSAEPRPET 306
Query: 66 IQVLSNLGSWLEKHDCDFLIEGHADELGSR---NSSIALGLRRAYAVFNYFVARGISASR 122
++ + L L ++ GH D R + L RA+ GI +R
Sbjct: 307 VRAMERLAKALAARPGRIVVRGHTDSRPFRSEVYDNWRLSTARAHMASYMLTRAGIDEAR 366
Query: 123 M-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
+ +V MP + +NRR + L+G
Sbjct: 367 IWRVEGAADRMPRNAADPKA--PENRRIEILLQGS 399
>gi|163748690|ref|ZP_02155943.1| OmpA family protein [Shewanella benthica KT99]
gi|161331800|gb|EDQ02604.1| OmpA family protein [Shewanella benthica KT99]
Length = 199
Score = 53.3 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/180 (18%), Positives = 56/180 (31%), Gaps = 28/180 (15%)
Query: 5 TIFIILSAITMMSISGI--------------------------DNLDTKISSPDTVLNES 38
FI L AIT++S + + +
Sbjct: 2 KTFITLLAITLLSACSSIVTMDGNTTQIHDLNDMDQDGVIVARERCNDTVMGATIDNYGC 61
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNS 97
+ + F SY I P + + S++ + + IEGH + GS
Sbjct: 62 GKVKPIHQRSELKILFANDSYYIAPLHYDQVEVIASFMNEFKNTKVTIEGHCSKTGSYQH 121
Query: 98 SIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
+++L RA AV + R R+ Y + P A +NRR I + G
Sbjct: 122 NLSLSQNRADAVTSLLTERFSIAPDRLIAIGYSYDRPVDESGTHRAQTRNRRVIAEVTGE 181
>gi|149189863|ref|ZP_01868143.1| putative sodium-type flagellar protein MotY precursor [Vibrio
shilonii AK1]
gi|148836349|gb|EDL53306.1| putative sodium-type flagellar protein MotY precursor [Vibrio
shilonii AK1]
Length = 334
Score = 53.3 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 3/110 (2%)
Query: 40 LQEQFSSSVGDSVF-FDTSSYSIRPADIQVLSNLGSWLEK--HDCDFLIEGHADELGSRN 96
L E S D V FD + Q L +L S+++ H L++GH D +GS
Sbjct: 199 LPEMNYSQARDVVLKFDFGQRVVTSEQRQTLQSLASYIKADGHISKVLVDGHTDNVGSSL 258
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
S++ + RA V + G A ++V ++G P E AKN
Sbjct: 259 SNLQVSRVRADDVASVLTELGTPAKLIEVRAHGARYPVSSNETEFGQAKN 308
>gi|90411166|ref|ZP_01219179.1| putative outer membrane protein [Photobacterium profundum 3TCK]
gi|90328012|gb|EAS44333.1| putative outer membrane protein [Photobacterium profundum 3TCK]
Length = 196
Score = 53.3 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 48/110 (43%), Gaps = 1/110 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAV 109
V F S +I A + + + +L+ + ++G+A +G+ +I L RRA V
Sbjct: 74 RVLFANDSTAIPEAFLSEIQRMADFLDVYPEAYIELKGYASPVGNSEYNIGLSKRRATKV 133
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
+A G++ R+K +G P E +RR + + G + +
Sbjct: 134 REQLIAEGVAPQRIKTIGFGDAEPIAAESSEATNTLSRRVVARVIGSKGS 183
>gi|89889840|ref|ZP_01201351.1| OmpA family protein [Flavobacteria bacterium BBFL7]
gi|89518113|gb|EAS20769.1| OmpA family protein [Flavobacteria bacterium BBFL7]
Length = 625
Score = 53.3 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 62/139 (44%), Gaps = 5/139 (3%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ T + + + + + ++FD + +IRP L L S+++K+
Sbjct: 484 SVAEEATAMVTVNMEPIIPDPPVVDEKIILNKIYFDLDASNIRPDAALELDRLVSFMKKY 543
Query: 80 D-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ + E +AD GS + ++AL RRA ++ Y V++G+ ASR+ G+ P +
Sbjct: 544 PELEVMAETYADIRGSDSYNLALTQRRAESIVAYVVSQGVDASRLTAVGRGEANPVMDCA 603
Query: 139 ----DEDAYAKNRRAIVFL 153
Y +RR+ +
Sbjct: 604 SQKCTSAEYELSRRSEFTI 622
>gi|298208185|ref|YP_003716364.1| hypothetical protein CA2559_08086 [Croceibacter atlanticus
HTCC2559]
gi|83848106|gb|EAP85976.1| hypothetical protein CA2559_08086 [Croceibacter atlanticus
HTCC2559]
Length = 366
Score = 53.3 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 5/108 (4%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
++ ++ S S+ A + + + I H D G+ +S+ AL RRA AV
Sbjct: 256 NIVWNLGSASLTNAAKAEIDAKLLPVMQQGVSVEIASHTDSRGTASSNQALSERRAQAVT 315
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGH-----DEDAYAKNRRAIVFL 153
NY +++GI++S++ YG+ E + NRR +
Sbjct: 316 NYLISKGINSSKITSNGYGESKLRNRCADGVSCTEREHTLNRRTQFRV 363
>gi|124007657|ref|ZP_01692361.1| outer membrane protein OmpA family, putative [Microscilla marina
ATCC 23134]
gi|123986955|gb|EAY26720.1| outer membrane protein OmpA family, putative [Microscilla marina
ATCC 23134]
Length = 632
Score = 53.3 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 6/99 (6%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVF 110
++F S + L + ++ H +E H D G+ S++ L +RA AV
Sbjct: 532 LYFAYKSTILDAQSRVYLQTVYKLMQHHPDLHLRVEAHTDASGTWTSNLLLSEQRAKAVK 591
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
+ GI + ++ V +G+ P + AKNRR
Sbjct: 592 AFLTDLGIPSGQIVVKGFGEARPL-----GASAAKNRRV 625
>gi|304312855|ref|YP_003812453.1| Outer membrane protein [gamma proteobacterium HdN1]
gi|301798588|emb|CBL46818.1| Outer membrane protein [gamma proteobacterium HdN1]
Length = 285
Score = 53.3 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/113 (16%), Positives = 42/113 (37%), Gaps = 2/113 (1%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH--DCDFLIEGHADELGSRNSS 98
+ + + + + L + + + ++GH+D +G +
Sbjct: 168 PANYEQLKASVLHYASEQWKPDGKAQARLDLIAGYQKLDAGIRKIFVDGHSDTMGRLGHN 227
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ RA AV Y +A+G+ + + +GK P + + NRR +V
Sbjct: 228 WEVSRLRANAVREYLIAKGVPEEMIVMRYWGKSRPIDKRGNRKSSPANRRVVV 280
>gi|306840141|ref|ZP_07472926.1| flagellar motor protein MotB [Brucella sp. NF 2653]
gi|306404786|gb|EFM61080.1| flagellar motor protein MotB [Brucella sp. NF 2653]
Length = 366
Score = 53.3 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 48/142 (33%), Gaps = 9/142 (6%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSNLGSWL 76
+ P + ++ + D V F S +Q+L + +
Sbjct: 224 AQNAGKAAKPEPMPDVTVVPVEGGVMIQLTDKVDYGMFTIGSAKPDARVVQMLERIAQVI 283
Query: 77 EKHDCDFLIEGHADELGSR---NSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEM 132
+ + +I GH D + + L RA + V G+ R ++V Y
Sbjct: 284 ARQLGEVIISGHTDARPFKSATYDNWRLSSARAQMAYYMLVRGGLDEKRVLRVEGYADRQ 343
Query: 133 PSVYGHDEDAYAKNRRAIVFLK 154
P + A+NRR +F+K
Sbjct: 344 P--KNPTDPNAAENRRIDIFIK 363
>gi|254720768|ref|ZP_05182579.1| flagellar motor protein MotB [Brucella sp. 83/13]
gi|265985826|ref|ZP_06098561.1| flagellar motor protein MotB [Brucella sp. 83/13]
gi|264664418|gb|EEZ34679.1| flagellar motor protein MotB [Brucella sp. 83/13]
Length = 366
Score = 53.3 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 48/142 (33%), Gaps = 9/142 (6%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSNLGSWL 76
+ P + ++ + D V F S +Q+L + +
Sbjct: 224 AQNAGKAAKPEPMPDVTVVPVEGGVMIQLTDKVDYGMFTIGSAKPDARVVQMLERIAQVI 283
Query: 77 EKHDCDFLIEGHADELGSR---NSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEM 132
+ + +I GH D + + L RA + V G+ R ++V Y
Sbjct: 284 ARQLGEVIISGHTDARPFKSATYDNWRLSSARAQMAYYMLVRGGLDEKRVLRVEGYADRQ 343
Query: 133 PSVYGHDEDAYAKNRRAIVFLK 154
P + A+NRR +F+K
Sbjct: 344 P--KNPTDPNAAENRRIDIFIK 363
>gi|332664418|ref|YP_004447206.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332333232|gb|AEE50333.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 289
Score = 53.3 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 41/119 (34%), Gaps = 7/119 (5%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-------KHDCDFLIEGHADELGSR 95
+ + D F D S +L + + I GH D G
Sbjct: 171 PLAYTFEDMTFSDESFAPDGVEFRPILPLVQYADSVRQYLALHKNKKLSIIGHTDSTGDA 230
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+++ LGL RA YF GI S+M S G + P E +NRR ++
Sbjct: 231 KNNLKLGLERAQNTMRYFRELGIPPSQMAAYSEGSKHPVSDNSTEVGKRRNRRINFIIE 289
>gi|313677243|ref|YP_004055239.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
gi|312943941|gb|ADR23131.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
Length = 771
Score = 52.9 bits (125), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 39/104 (37%), Gaps = 6/104 (5%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
++FD + + L + ++ I G+A G + L +RA V
Sbjct: 665 KIYFDVGASEFDAKYNEQLQEIYQKIKGNEQLGIQISGYASAEGDPEFNRKLSNKRAIEV 724
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
N+F +GI R+ YG D A+NRR V +
Sbjct: 725 VNFFNYKGIVRRRIIAKGYGSTR--ADTKDA---AENRRVEVQI 763
>gi|37704634|gb|AAR01589.1| OprF [Pseudomonas sp. MFY79]
Length = 296
Score = 52.9 bits (125), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAV 109
V FD ++P + NL +++++ ++EGH D +G + L RRA AV
Sbjct: 211 DVKFDFDKSVVKPNSYADVKNLADFMKQYPQTTTVVEGHTDSVGPDAYNQKLSQRRADAV 270
Query: 110 FNYFVARGISASRMKVTSYGKEMPSV 135
V GI A R+ YG+ P
Sbjct: 271 KQVLVKDGIDAGRVSSVGYGESRPVA 296
>gi|33593045|ref|NP_880689.1| putative lipoprotein [Bordetella pertussis Tohama I]
gi|33563420|emb|CAE42299.1| putative lipoprotein [Bordetella pertussis Tohama I]
gi|332382458|gb|AEE67305.1| putative lipoprotein [Bordetella pertussis CS]
Length = 182
Score = 52.9 bits (125), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 1/122 (0%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
IS + +++ ++ ++ + ++ V FD I A L ++ ++
Sbjct: 55 ISDLSAQVGALAARHEGVSVRQGKDAVTIAMMGDVLFDFDKADILAAAEPTLRDIAELIK 114
Query: 78 KHDCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ IEGH D GS + + L LRRA AV + A G+ A+++ V G P
Sbjct: 115 SPATGIVAIEGHTDSKGSDSYNKGLSLRRAQAVAQWLGAHGVDAAKLSVRGLGAARPVQP 174
Query: 137 GH 138
Sbjct: 175 NQ 176
>gi|94500736|ref|ZP_01307265.1| chemotaxis MotB protein [Oceanobacter sp. RED65]
gi|94427058|gb|EAT12039.1| chemotaxis MotB protein [Oceanobacter sp. RED65]
Length = 226
Score = 52.9 bits (125), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 53/136 (38%), Gaps = 12/136 (8%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEG 87
++ ++ D +D+ S +IRP + VL+ + +E +EG
Sbjct: 89 MQENVSVVIDKKGVKVEFSDFSLYDSGSAAIRPQALPVLNEVTKVIESSVHKTHLVEVEG 148
Query: 88 HAD----ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG-----H 138
H D S+ L RA V Y + +G+ ++K + Y P
Sbjct: 149 HTDDVPISTEKFPSNWELSAARASNVVKYLLGKGVKKEQLKASGYADSRPKSAPIEGQVM 208
Query: 139 DEDAYAKNRRAIVFLK 154
D A+NRR +++++
Sbjct: 209 DAQQRAENRRVVIYVR 224
>gi|281192981|gb|ADA57643.1| outer membrane protein A precursor [Aeromonas hydrophila]
Length = 343
Score = 52.9 bits (125), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 55/146 (37%), Gaps = 16/146 (10%)
Query: 28 ISSPDTVLNESSLQEQFSS----SVGDSVFFDTSSYSIRPA---DIQVLSNLGSWLEKHD 80
+P V+ E+ ++ V S++P + L + D
Sbjct: 194 APAPAPVVEEAPAPAPQVVEKNFALNSDVLLAFGKDSLKPEGVAALNALYQQIVEFQPKD 253
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS------ 134
+ ++ G+ + +GS + L RA V N+ V++G++AS++ + G+ P
Sbjct: 254 GNAVVVGYTNRIGSDAYNQKLSEARARTVANFLVSKGMAASKVAIEGRGEANPVTGTKCN 313
Query: 135 ---VYGHDEDAYAKNRRAIVFLKGCR 157
A +RR V + G +
Sbjct: 314 GVKAKAQLTSCLAPDRRVEVRVSGVQ 339
>gi|218780334|ref|YP_002431652.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01]
gi|218761718|gb|ACL04184.1| OmpA/MotB domain protein [Desulfatibacillum alkenivorans AK-01]
Length = 387
Score = 52.9 bits (125), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Query: 54 FDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FDT+ ++P + ++ + ++GHAD G+++ + L RRA +V
Sbjct: 285 FDTNKADVKPEYLPLVYKVIPILNNNPGMKIELQGHADNRGAKDYNQGLSERRAESVKKI 344
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDA 142
V +G+ A R+ +G P V E
Sbjct: 345 LVDKGVDAGRLSTKGWGFTKPIVPNDSEAN 374
>gi|332297504|ref|YP_004439426.1| OmpA/MotB domain protein [Treponema brennaborense DSM 12168]
gi|332180607|gb|AEE16295.1| OmpA/MotB domain protein [Treponema brennaborense DSM 12168]
Length = 1044
Score = 52.9 bits (125), Expect = 1e-05, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 22/54 (40%)
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA V + G+ SR+ G P V D+D + KNRR L
Sbjct: 989 PLSEARAQTVKKMLIEFGVDGSRLTTVGIGGRQPVVPRSDKDNWWKNRRVEFIL 1042
>gi|330955899|gb|EGH56159.1| OmpA/MotB [Pseudomonas syringae Cit 7]
Length = 132
Score = 52.9 bits (125), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 28/69 (40%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
LI GHAD G ++ + RA +V F G+ +R+ G MP
Sbjct: 2 VLILGHADTSGPTEANQKISQERAQSVAAIFRLSGLERNRLSQRGMGAVMPRAANDSLQG 61
Query: 143 YAKNRRAIV 151
A NRR +
Sbjct: 62 RALNRRVEI 70
>gi|239834431|ref|ZP_04682759.1| Protein mbhA [Ochrobactrum intermedium LMG 3301]
gi|239822494|gb|EEQ94063.1| Protein mbhA [Ochrobactrum intermedium LMG 3301]
Length = 379
Score = 52.9 bits (125), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/143 (18%), Positives = 49/143 (34%), Gaps = 9/143 (6%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSNLGSW 75
+ + K + P + + + D + F S +Q+L +
Sbjct: 236 TAKEGTAAKKAEPMPDVTVVPVDGGVMIQLTDKIDYGMFTIGSAKPDARVVQMLERIAQV 295
Query: 76 LEKHDCDFLIEGHADELGSR---NSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKE 131
+ + + +I GH D + + L RA + V G+ R ++V Y
Sbjct: 296 ISRQPGEVIISGHTDARPFKSATYDNWRLSSARAQMAYYMLVRGGLDEKRVLRVEGYADR 355
Query: 132 MPSVYGHDEDAYAKNRRAIVFLK 154
P A+NRR +FLK
Sbjct: 356 QPKNANDPNA--AENRRIDIFLK 376
>gi|197337755|ref|YP_002158384.1| OmpA family protein [Vibrio fischeri MJ11]
gi|197315007|gb|ACH64456.1| OmpA family protein [Vibrio fischeri MJ11]
Length = 1600
Score = 52.9 bits (125), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 44/118 (37%), Gaps = 15/118 (12%)
Query: 50 DSVFFDTSSYSIRPAD------IQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGL 103
D+ FD S+ I+P Q ++ L +I GH +GS ++ L
Sbjct: 636 DATMFDFDSHEIQPDFSGASTPFQSIAEELKKLSGAPFVIMIIGHTCSIGSEAYNLELSK 695
Query: 104 RRAYAVFNYFVA-------RGISASRMKVTSYGKEMPS--VYGHDEDAYAKNRRAIVF 152
+RA AV N + + I + + V G+ P E+ NRR +
Sbjct: 696 QRAVAVKNSIIDALSDEKYKSIWSDLLVVKGEGESTPLPGNNNETEEERKLNRRVEIV 753
>gi|301064490|ref|ZP_07204897.1| OmpA family protein [delta proteobacterium NaphS2]
gi|300441407|gb|EFK05765.1| OmpA family protein [delta proteobacterium NaphS2]
Length = 275
Score = 52.9 bits (125), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 48/126 (38%), Gaps = 7/126 (5%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
LD +P ++ V V FD +I+P L E +
Sbjct: 152 CAELDKCPGTPKGAK-----VNEYGCWVIGDVLFDFDKANIKPEFYGQLDEAARVFEMNP 206
Query: 81 -CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
++G+ D +G+ ++ L LRRA AV NY V RG+ SR+ +P +
Sbjct: 207 GLKVEVQGNTDNVGTYKYNMGLSLRRANAVLNYLVKRGVDRSRLAARGSATHVP-SHNDT 265
Query: 140 EDAYAK 145
+ A
Sbjct: 266 PEGRAL 271
>gi|90415116|ref|ZP_01223071.1| hypothetical OmpA family protein [Photobacterium profundum 3TCK]
gi|90323761|gb|EAS40380.1| hypothetical OmpA family protein [Photobacterium profundum 3TCK]
Length = 252
Score = 52.9 bits (125), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 53/122 (43%), Gaps = 3/122 (2%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRNS 97
+E+ + + +V F T S I P Q L + + + + + G+AD G
Sbjct: 125 QSEERQALMLEVNVHFRTGSSDIEPLFQQQLDEIAELMKQSPEMSWQLAGYADRRGDSQK 184
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
+ L +RR AV +Y ++GI ++ V +YG P + + +RR L+ +
Sbjct: 185 NFDLSMRRVDAVRDYLESQGIDTDQLLVDAYGDLEPLKSEQNFENDFFDRRV--TLRSTQ 242
Query: 158 AN 159
+
Sbjct: 243 GD 244
>gi|224417757|ref|ZP_03655763.1| motility protein MotB [Helicobacter canadensis MIT 98-5491]
gi|253827100|ref|ZP_04869985.1| flagellar motor protein MotB [Helicobacter canadensis MIT 98-5491]
gi|313141298|ref|ZP_07803491.1| motb protein [Helicobacter canadensis MIT 98-5491]
gi|253510506|gb|EES89165.1| flagellar motor protein MotB [Helicobacter canadensis MIT 98-5491]
gi|313130329|gb|EFR47946.1| motb protein [Helicobacter canadensis MIT 98-5491]
Length = 256
Score = 52.9 bits (125), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 48/132 (36%), Gaps = 8/132 (6%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADI-QVLSNLGSWLEKHDCD--FLIE 86
+ + +E + +S+ F++ S ++ + L L +K
Sbjct: 107 ANGPAVEFEEAEEGVIIRIPESLLFESGSATLTNSSGLAFLKRLTLEFDKLPETALIKAI 166
Query: 87 GHADELGSRNSSI-----ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
GH D + R + I L + R V + GIS R+ G+ P +
Sbjct: 167 GHTDNVPMRENPIFADNLELSIARGVNVAELIITEGISKERVLGGGEGEFSPIASNKIPE 226
Query: 142 AYAKNRRAIVFL 153
AKNRR +++
Sbjct: 227 LRAKNRRVDLYI 238
>gi|58422899|gb|AAW73249.1| OmpA [Serratia sp. MF 426]
Length = 228
Score = 52.9 bits (125), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 52/138 (37%), Gaps = 5/138 (3%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPA---DIQV 68
+ + +S D + + E ++ V F+ + +++P +
Sbjct: 81 GMLSVGVSYRFGQDEAAPVVAPAPAPAPVVETKKFTLTSDVLFNFNKATLKPEGQHALDQ 140
Query: 69 LSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L S L+ D ++ G D +GS + L +RA +V +Y V++GI + ++
Sbjct: 141 LYTQLSSLDPKDGSVVVLGFTDAVGSAQYNQRLSEQRAQSVVDYLVSKGIPSDKISARGM 200
Query: 129 GKEMPS--VYGHDEDAYA 144
GK P A
Sbjct: 201 GKSNPVTGDSCGYRSGRA 218
>gi|254438848|ref|ZP_05052342.1| OmpA family protein [Octadecabacter antarcticus 307]
gi|198254294|gb|EDY78608.1| OmpA family protein [Octadecabacter antarcticus 307]
Length = 743
Score = 52.9 bits (125), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 43/120 (35%), Gaps = 14/120 (11%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLG--------SWLEKHDCDFLIEGHADELG-----S 94
V F+ + + + ++ + E D ++GH D +
Sbjct: 621 FSSEVLFEQGAAQLSGEGQREIAKVATILRDVAGDIPESIDWVIRVDGHTDNVPLSGAGE 680
Query: 95 RNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L RA +V Y V I R+ +G+ P + +A A+NRR + L
Sbjct: 681 FANNWELSQARALSVVLYMVNFLAIPPERLAANGFGQYQPINPANTTEARAQNRRIELKL 740
>gi|170693151|ref|ZP_02884312.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
gi|170142149|gb|EDT10316.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
Length = 242
Score = 52.9 bits (125), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 60/154 (38%), Gaps = 13/154 (8%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSY---SIRPADIQVLSN 71
++ G + + + V ++ E F+ + F ++ P+ L +
Sbjct: 91 LLFKCGQEAGNNAAADTGAVAAQAPTLESFA--LESDALFPFGKSAADTMLPSAKAQLDD 148
Query: 72 LGSWLEKHD--CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
+ + + KH+ + GH D LG + + L L RA V +Y +A G+ S ++ G
Sbjct: 149 VAARIRKHEQVSAIEVVGHTDRLGPESLNGPLSLARANTVRDYLIAHGLDGSIIQAKGVG 208
Query: 130 KEMPSVYGHDEDAYAK------NRRAIVFLKGCR 157
P D + A +R + ++G +
Sbjct: 209 ASQPRTNCADREGRALIACLQPDRYVSITVQGRK 242
>gi|90578134|ref|ZP_01233945.1| putative outer membrane protein [Vibrio angustum S14]
gi|90441220|gb|EAS66400.1| putative outer membrane protein [Vibrio angustum S14]
Length = 196
Score = 52.9 bits (125), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 62/142 (43%), Gaps = 4/142 (2%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDS---VFFDTSSYSIRPADIQVLSNLGSW-LE 77
+ D +P + ++ F + ++ V F S I + ++ +SN+ + +
Sbjct: 42 NQRDRCADTPIDAVVDNDGCPTFVKNSEENNIHVLFANDSSEIPESYMENISNMSEFLAK 101
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
++G+A +G+ ++ L RRA A+ + G++ SR+K +G P
Sbjct: 102 YPKTHIELKGYASPVGNAAYNVGLSKRRAAAIQQALITEGVAPSRIKTIGFGDSDPVKAS 161
Query: 138 HDEDAYAKNRRAIVFLKGCRAN 159
E++ +RR + + G + N
Sbjct: 162 DAEESNTLSRRVVAQVVGSQGN 183
>gi|16127077|ref|NP_421641.1| OmpA family protein [Caulobacter crescentus CB15]
gi|221235874|ref|YP_002518311.1| outer membrane protein A [Caulobacter crescentus NA1000]
gi|13424457|gb|AAK24809.1| OmpA family protein [Caulobacter crescentus CB15]
gi|220965047|gb|ACL96403.1| outer membrane protein A [Caulobacter crescentus NA1000]
Length = 191
Score = 52.9 bits (125), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEK-HDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
V+F S + + VL ++ + + ++ GHAD G +I L RRA A
Sbjct: 86 IVYFPFDSAVLDESGQIVLVAAANYAKSGNATRIVVVGHADTAGPDAYNIGLSERRAKAT 145
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ V GISAS + V G+ P+V D + NRR +
Sbjct: 146 ADTLVNLGISASTIAVDWKGESAPAVATGDGVSEPLNRRVTI 187
>gi|167946599|ref|ZP_02533673.1| OmpA/MotB domain protein [Endoriftia persephone 'Hot96_1+Hot96_2']
Length = 126
Score = 52.9 bits (125), Expect = 1e-05, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 27/67 (40%)
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
G+ S S+ L RA +V Y ++GI R+ +G+ G +A
Sbjct: 7 TPTGYRSTPSSVPSNWELSSARAVSVVRYLASQGIPQRRLTAAGFGEFHSIDTGDTPEAL 66
Query: 144 AKNRRAI 150
+ NRR
Sbjct: 67 SHNRRIE 73
>gi|226225701|ref|YP_002759807.1| chemotaxis MotB protein [Gemmatimonas aurantiaca T-27]
gi|226088892|dbj|BAH37337.1| chemotaxis MotB protein [Gemmatimonas aurantiaca T-27]
Length = 289
Score = 52.9 bits (125), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/141 (23%), Positives = 52/141 (36%), Gaps = 7/141 (4%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
++ D+L + D + + L+ + S V+F S + A + L +G L
Sbjct: 116 LATSDSLKRLNAQVDVQVTQEGLRIELVESERGDVYFPIGSSQMNSATVLTLQLIGQELS 175
Query: 78 KHDCDFLIEGHADE----LGSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEM 132
+IEGH D + ++ L RA A A GI R+ V Y
Sbjct: 176 PIAQSLIIEGHTDAAPFGRDASYTNWELSADRANAARRVLQAAGIDPKRISEVRGYADTK 235
Query: 133 PSVYGHDEDAYAKNRRAIVFL 153
P V + NRR V +
Sbjct: 236 PRVINDPKA--PANRRISVLI 254
>gi|295134914|ref|YP_003585590.1| OmpA/MotB domain-containing protein [Zunongwangia profunda SM-A87]
gi|294982929|gb|ADF53394.1| OmpA/MotB domain-containing protein [Zunongwangia profunda SM-A87]
Length = 618
Score = 52.9 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 9/112 (8%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYA 108
D +FF+ + Y IRP + L ++ LE IE H D GS ++ L RA +
Sbjct: 506 DPIFFEFNEYDIRPRAAKQLDHIVYVLESFPEMKIKIESHTDSRGSDTYNLLLSQNRAKS 565
Query: 109 VFNYFVARGISASRM-KVTSYGKEMPS------VYGHDEDAYAKNRRAIVFL 153
NY ++RGI+ +R+ + YG+ V +DE+ + +NRR+ +
Sbjct: 566 TKNYLISRGIAENRIVSIKGYGEIEILNRCVNGVECNDEE-HEENRRSNFII 616
>gi|114769425|ref|ZP_01447051.1| flagellar motor protein [alpha proteobacterium HTCC2255]
gi|114550342|gb|EAU53223.1| flagellar motor protein [alpha proteobacterium HTCC2255]
Length = 638
Score = 52.9 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 37/113 (32%), Gaps = 7/113 (6%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG------SRNSSIA 100
SVG + I + D ++GH D + +
Sbjct: 522 SVGSAYLGSRGKTEISKVADIINQIADEIPTGIDWILRVDGHTDRIPFSGFGNDYKDNWE 581
Query: 101 LGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
L RA +V Y + I A+R+ +G+ P +AY NRR +
Sbjct: 582 LSQARALSVVRYLMDDLDIPANRLAANGFGEFQPIDNRDTPEAYKTNRRIELK 634
>gi|328908054|gb|EGG27813.1| putative outer membrane protein A [Propionibacterium sp. P08]
Length = 48
Score = 52.9 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 7/46 (15%), Positives = 13/46 (28%)
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ + + G+ P E NRR + +K
Sbjct: 1 MARLLGLQLSKGVTLVTAGKGEADPVASNDSEAGRRLNRRVTITVK 46
>gi|327404032|ref|YP_004344870.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
16823]
gi|327319540|gb|AEA44032.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
Length = 734
Score = 52.9 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 43/113 (38%), Gaps = 11/113 (9%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADELGSRNSSIALGLRRAYAVF 110
++FD + Y IRP L + + + + + + H D G+ ++ L +RA A
Sbjct: 619 IYFDLAKYDIRPDAAVELDKIVAIMNEFPTMVIELGSHTDCRGTALKNLELSQKRADASA 678
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGH----------DEDAYAKNRRAIVFL 153
NY ++ R+ YG+ E ++ NRR +
Sbjct: 679 NYIKSKIKDPYRIAGKGYGETKILNGCSCEGPKKQPKYTEAQHSVNRRTEFLV 731
>gi|83717436|ref|YP_439684.1| OmpA/SmpA/OmlA family outer membrane lipoprotein [Burkholderia
thailandensis E264]
gi|83651261|gb|ABC35325.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Burkholderia
thailandensis E264]
Length = 298
Score = 52.9 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 52/153 (33%), Gaps = 16/153 (10%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIR---PADIQVLSNLG-- 73
S L P + + + ++ + F ++R PA L +
Sbjct: 147 SACKALADGP-KPAPAVQTAPRDDVKQFTLDYQLLFPFDKSALRDLLPAGRAELDRIAAT 205
Query: 74 -SWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
+H + G+ D LG+ + L L RA A+ Y RG+ + + GK
Sbjct: 206 LEQQYQHIRSVRVTGYTDRLGTNTYNRQLSLARAEAIREYLTTRGLPGNLIVAQGLGKAD 265
Query: 133 PSVYGHDEDAY--------AKNRRAIVFLKGCR 157
P D + A +RR + + G R
Sbjct: 266 PV-SNGCPDGHSAEAIACLAPDRRVRIDVAGER 297
>gi|53719675|ref|YP_108661.1| OmpA family protein [Burkholderia pseudomallei K96243]
gi|76810742|ref|YP_333152.1| OmpA family protein [Burkholderia pseudomallei 1710b]
gi|126453035|ref|YP_001065862.1| OmpA family outer membrane protein [Burkholderia pseudomallei
1106a]
gi|134282791|ref|ZP_01769494.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 305]
gi|167720016|ref|ZP_02403252.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
DM98]
gi|167739026|ref|ZP_02411800.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 14]
gi|167816239|ref|ZP_02447919.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 91]
gi|167824618|ref|ZP_02456089.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 9]
gi|167846148|ref|ZP_02471656.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
B7210]
gi|167894724|ref|ZP_02482126.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
7894]
gi|167903126|ref|ZP_02490331.1| outer membrane protein, OmpA family [Burkholderia pseudomallei NCTC
13177]
gi|167911363|ref|ZP_02498454.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 112]
gi|167919383|ref|ZP_02506474.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
BCC215]
gi|217423544|ref|ZP_03455045.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 576]
gi|226196265|ref|ZP_03791848.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
Pakistan 9]
gi|237811866|ref|YP_002896317.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
MSHR346]
gi|242314198|ref|ZP_04813214.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
1106b]
gi|254180141|ref|ZP_04886740.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
1655]
gi|254188449|ref|ZP_04894960.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
Pasteur 52237]
gi|254198064|ref|ZP_04904486.1| outer membrane protein, OmpA family [Burkholderia pseudomallei S13]
gi|254259492|ref|ZP_04950546.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
1710a]
gi|254297974|ref|ZP_04965427.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
406e]
gi|52210089|emb|CAH36063.1| OmpA family protein [Burkholderia pseudomallei K96243]
gi|76580195|gb|ABA49670.1| OmpA family protein [Burkholderia pseudomallei 1710b]
gi|126226677|gb|ABN90217.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
1106a]
gi|134245877|gb|EBA45968.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 305]
gi|157808001|gb|EDO85171.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
406e]
gi|157936128|gb|EDO91798.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
Pasteur 52237]
gi|169654805|gb|EDS87498.1| outer membrane protein, OmpA family [Burkholderia pseudomallei S13]
gi|184210681|gb|EDU07724.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
1655]
gi|217393402|gb|EEC33423.1| outer membrane protein, OmpA family [Burkholderia pseudomallei 576]
gi|225931663|gb|EEH27667.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
Pakistan 9]
gi|237506719|gb|ACQ99037.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
MSHR346]
gi|242137437|gb|EES23839.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
1106b]
gi|254218181|gb|EET07565.1| outer membrane protein, OmpA family [Burkholderia pseudomallei
1710a]
Length = 236
Score = 52.9 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 39/103 (37%), Gaps = 7/103 (6%)
Query: 57 SSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA 115
+ S+ Q LS L ++H I G+ D LGS + L RA V +Y +A
Sbjct: 127 DAASMTEQGRQQLSQLAQRLTDRHAQTVSIVGYTDRLGSDAYNRQLSQARAKTVGDYLIA 186
Query: 116 RGISASRMKVTSYGKEMPSVYGHDED------AYAKNRRAIVF 152
G+ A + G P V + A NRR V
Sbjct: 187 AGVPADSVHAEGRGASDPLVQCDQRERAALIACLAPNRRVEVV 229
>gi|126736504|ref|ZP_01752245.1| OmpA/MotB [Roseobacter sp. CCS2]
gi|126714042|gb|EBA10912.1| OmpA/MotB [Roseobacter sp. CCS2]
Length = 526
Score = 52.9 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 35/107 (32%), Gaps = 6/107 (5%)
Query: 54 FDTSSYSIRPADIQVLSNLGS---WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
F+T S ++ + L + + + G D +G + L RRA V
Sbjct: 414 FETGSSNLDARAQDDIVRLARLLSSDAYRNKEAVFVGFTDSVGDPELNRQLSERRAGQVV 473
Query: 111 NYFVARGIS---ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ ++ YG+ P NRR V+++
Sbjct: 474 QELLDENPDLQSNVALQTIGYGEISPLGCNETNTGRRINRRVEVWVR 520
>gi|254373811|ref|ZP_04989294.1| hypothetical protein FTDG_01595 [Francisella novicida GA99-3548]
gi|151571532|gb|EDN37186.1| hypothetical protein FTDG_01595 [Francisella novicida GA99-3548]
Length = 207
Score = 52.9 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/195 (20%), Positives = 67/195 (34%), Gaps = 44/195 (22%)
Query: 1 MQYSTI-FIILSAITMMSISGIDNLDTKISSPDTVLNESSLQ------------------ 41
M+ I ++ ++ M++ D D S Q
Sbjct: 2 MKKRIINLAVIGSMLMLASCSSTRPDNSDLIKDKYAGVDSSQALEMSSQIYGSDKLSSDQ 61
Query: 42 -EQFSSSVGDS----VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
EQ + + V+F SY+I + L + + D + G+ D GS
Sbjct: 62 VEQMKKELMNINCRSVYFGFDSYNITDDAKECLDKTADYLIAHPDQPIKLSGNTDPRGSE 121
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG------------------ 137
+ LG +RA AV+NY + + ++ ++ V SYGK P+
Sbjct: 122 KYNFNLGQKRAEAVYNYLLGKNVNKDQICVVSYGKLKPAAEPTQFYDEFCKDGVNDACMY 181
Query: 138 -HDEDAYAKNRRAIV 151
E AY +RR +
Sbjct: 182 KASEKAYYLDRRTEI 196
>gi|327539245|gb|EGF25868.1| OmpA/MotB domain protein [Rhodopirellula baltica WH47]
Length = 282
Score = 52.9 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 38/128 (29%), Gaps = 7/128 (5%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE--KHDCDFLIEGHAD 90
L E + F + ++P+ +L + L IEG+ D
Sbjct: 150 GGLKVEQDGEVLRVVLPSDQLFAQGTGQLQPSAGAILDPTAAQLRSVFPRQRIGIEGYTD 209
Query: 91 ELGSRN----SSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAK 145
S+ L + AV ++ R ++ + G P A
Sbjct: 210 NAPMYGGAAGSAHQLTSAQTGAVLDWLTRRSGMPEQQLFTVAQGSNNPRQDNTTPAGRAA 269
Query: 146 NRRAIVFL 153
NRR + +
Sbjct: 270 NRRIELVI 277
>gi|332827935|gb|EGK00657.1| hypothetical protein HMPREF9455_02931 [Dysgonomonas gadei ATCC
BAA-286]
Length = 661
Score = 52.5 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 45/134 (33%), Gaps = 28/134 (20%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRA 106
V +++F+D ++RP + L L L + + H D GS + L RRA
Sbjct: 520 VLENIFYDFDKATLRPESKEELDGLIDLLNLNPNVTIELSAHTDRKGSDEYNNRLSQRRA 579
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSV---------------------------YGHD 139
+V NY + GI+ R+ GK P
Sbjct: 580 ESVVNYLITHGIAKDRLTAVGKGKAQPKNVTKAVVKKYDFLKEGEVLTEQFIQELPPEQQ 639
Query: 140 EDAYAKNRRAIVFL 153
+ A NRR +
Sbjct: 640 DMADQVNRRTEFRV 653
>gi|144897493|emb|CAM74357.1| Outer membrane protein and related peptidoglycan-associated (lipo)
[Magnetospirillum gryphiswaldense MSR-1]
Length = 280
Score = 52.5 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 4/122 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK-HDCDFLIEGHA 89
P V+ + + V V+FD +I A ++L ++ + GH
Sbjct: 158 PKPVVAAPASPKIIKQFV---VYFDLGKSAITAAAKKILVDVVKDEAALKPTSVYLAGHT 214
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D +G+ ++ AL ++R V G++ + + S+G+ +V D A KNRR
Sbjct: 215 DTVGNAKANEALSIKRTETVAKELAKMGVATKVLDMKSHGEAKLAVPTKDNVAEGKNRRV 274
Query: 150 IV 151
+
Sbjct: 275 EI 276
>gi|83312507|ref|YP_422771.1| Outer membrane protein and related peptidoglycan-associated lipo
protein [Magnetospirillum magneticum AMB-1]
gi|82947348|dbj|BAE52212.1| Outer membrane protein and related peptidoglycan-associated lipo
protein [Magnetospirillum magneticum AMB-1]
Length = 278
Score = 52.5 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 49/127 (38%), Gaps = 5/127 (3%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEG 87
P+ + +++ + + V+FD + ++ + L + + + + G
Sbjct: 155 VEPELQVKAAAVAPKIVKTF--IVYFDFNKSTLTKEAQKTLKEVATAAGQIKPASIYVAG 212
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
H D +G + L RA AV GI + + S+G +V AKNR
Sbjct: 213 HTDTVGKSGYNDKLSNARAAAVSKQLAKAGIKS--IDAKSFGFTKLAVPTKANTKEAKNR 270
Query: 148 RAIVFLK 154
R ++ +
Sbjct: 271 RVEIYFE 277
>gi|254461268|ref|ZP_05074684.1| flagellar motor protein [Rhodobacterales bacterium HTCC2083]
gi|206677857|gb|EDZ42344.1| flagellar motor protein [Rhodobacteraceae bacterium HTCC2083]
Length = 760
Score = 52.5 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 43/125 (34%), Gaps = 14/125 (11%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG--------SWLEKHDCDFLIEGHADELG 93
E V F ++ P ++ + + D ++GH D +
Sbjct: 632 EGDRFVFSSEVLFPPGRAALSPEGRGEVAKVASILLAVADDIPDGIDWIIRVDGHTDNVP 691
Query: 94 -----SRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+ L RA +V Y V GI +R+ +G+ P ++A A+NR
Sbjct: 692 LSGLGEFADNWELSQARALSVVKYMVNFLGIQPTRLAANGFGQFQPVNLEDSDEARAQNR 751
Query: 148 RAIVF 152
R +
Sbjct: 752 RIELK 756
>gi|167626685|ref|YP_001677185.1| OmpA family peptidoglycan-associated lipoprotein [Francisella
philomiragia subsp. philomiragia ATCC 25017]
gi|167596686|gb|ABZ86684.1| peptidoglycan-associated lipoprotein, OmpA family [Francisella
philomiragia subsp. philomiragia ATCC 25017]
Length = 209
Score = 52.5 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/196 (19%), Positives = 66/196 (33%), Gaps = 45/196 (22%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSP---------------------DTVLNESS 39
M +I I +M+ ++ + S + S
Sbjct: 1 MMKKSIVSIAVVSSMLMLASCSSTRPDNSDLIKDKYAGVDSSQALEMSSQIYGSDNMSSD 60
Query: 40 LQEQFSSSVGDS----VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGS 94
EQ + D V+F SY+I + L + + D + G+ D GS
Sbjct: 61 QVEQMKKELMDINCRSVYFGFDSYNITDDAKECLDKTADYLIAHPDQPIKLSGNTDPRGS 120
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY-------------GHD-- 139
+ LG +RA AV+NY + + ++ ++ V SYGK P+
Sbjct: 121 EKYNFNLGQKRAEAVYNYLLGKNVNKDQICVVSYGKLKPAAEPTQFYDEFCTDGVNDTCS 180
Query: 140 ----EDAYAKNRRAIV 151
E A+ +RR +
Sbjct: 181 YKASEKAFYLDRRTEI 196
>gi|256376462|ref|YP_003100122.1| OmpA/MotB domain protein [Actinosynnema mirum DSM 43827]
gi|255920765|gb|ACU36276.1| OmpA/MotB domain protein [Actinosynnema mirum DSM 43827]
Length = 295
Score = 52.5 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 37/102 (36%), Gaps = 5/102 (4%)
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD----ELGSRNSSIALGLRRAYAVFNY 112
+ P +++ L L+ ++GH + + SS L RA +V Y
Sbjct: 176 DRAELLPDGQRIVDALAPVLKSVGNRVEVDGHTNQLPVATVNYPSSWELSTARASSVVRY 235
Query: 113 FVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ R ++ R+ Y P D + NRR V +
Sbjct: 236 LIERDGLASDRLTAVGYADTRPLYDPADPRSVTGNRRVEVVV 277
>gi|149908775|ref|ZP_01897435.1| hypothetical protein PE36_21279 [Moritella sp. PE36]
gi|149808049|gb|EDM67990.1| hypothetical protein PE36_21279 [Moritella sp. PE36]
Length = 284
Score = 52.5 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKH--DCDFLIEGHADELGSRNSSIALGLRRAY 107
++++ SY + Q ++ + ++ LI+GH++ +G+ +++ L +RA
Sbjct: 173 RNLYYSGGSYLLNTQQKQEMAAIVKYISLDGLVTKVLIDGHSNSIGNTVNNLLLSQQRAD 232
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V+ Y + GIS M+V S+G P KNRR + +
Sbjct: 233 DVYMYLMEAGISTKLMEVRSHGDRYPLKSDRTASGREKNRRVNLRI 278
>gi|37704656|gb|AAR01600.1| OprF [Pseudomonas sp. MFY146]
Length = 297
Score = 52.5 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGL 103
V V FD ++ + + N+ +++++ + G+ D +G+ ++ L
Sbjct: 206 VVKVELDVKFDFDKAVVKSQYLPDIKNVAQFMQQYPATSTTVNGYTDSVGTDAYNLKLSQ 265
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
RRA +V V +G+S SR+ +GK P
Sbjct: 266 RRADSVRQALVQQGVSPSRVDAVGHGKSDPVA 297
>gi|126736583|ref|ZP_01752323.1| OmpA/MotB [Roseobacter sp. CCS2]
gi|126713896|gb|EBA10767.1| OmpA/MotB [Roseobacter sp. CCS2]
Length = 513
Score = 52.5 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 35/107 (32%), Gaps = 6/107 (5%)
Query: 54 FDTSSYSIRPADIQVLSNLGS---WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
F+T S ++ + L + + + G D +G + L RRA V
Sbjct: 401 FETGSSNLDARAQDDIVRLARLLSSDAYRNKEAVFVGFTDSVGDPELNRQLSERRAGQVV 460
Query: 111 NYFVARGIS---ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ ++ YG+ P NRR V+++
Sbjct: 461 QELLDENPDLQSNVALQTIGYGEISPLGCNETNTGRRINRRVEVWVR 507
>gi|157963679|ref|YP_001503713.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC
700345]
gi|157848679|gb|ABV89178.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345]
Length = 404
Score = 52.5 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 53/136 (38%), Gaps = 7/136 (5%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
D S+ +L + +V ++ S I ++ + L ++E++
Sbjct: 263 AQDQCLDTPSTHAVDSRGCTLFAPRVVEMKLTVLYENDSDKIDLSNTDKIQKLADFIEQY 322
Query: 80 DCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYG 137
D + GH +GS+ + L RRA +V A A+ +K G+ P
Sbjct: 323 DIKQITVFGHTSAVGSQAYNQKLSERRAASVAEMLAADFNIATGIIKAVGKGESEPIS-- 380
Query: 138 HDEDAYAKNRRAIVFL 153
H + +NRR V+L
Sbjct: 381 HIPE---QNRRIEVYL 393
>gi|124004962|ref|ZP_01689805.1| OmpA family protein [Microscilla marina ATCC 23134]
gi|123989640|gb|EAY29186.1| OmpA family protein [Microscilla marina ATCC 23134]
Length = 645
Score = 52.5 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 37/105 (35%), Gaps = 3/105 (2%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVF 110
+ F + P L L L H I GH D G ++++ L RA A+
Sbjct: 537 IEFKEGKADVIPDMEADLDKLVILLADHPKLGLKISGHTDSSGDSDANLKLSQNRADAIK 596
Query: 111 NYFVAR-GISASRMKVTSYGKEMPS-VYGHDEDAYAKNRRAIVFL 153
Y V + R+ YG +P ++ NRR +
Sbjct: 597 KYIVDKGKFDPKRVTAIGYGDTVPIIKSEKTDEDKKINRRVEFEI 641
>gi|119385186|ref|YP_916242.1| OmpA/MotB domain-containing protein [Paracoccus denitrificans
PD1222]
gi|119374953|gb|ABL70546.1| OmpA/MotB domain protein [Paracoccus denitrificans PD1222]
Length = 197
Score = 52.5 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 53/134 (39%), Gaps = 6/134 (4%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
G + T+ + P + + ++ + F S SI P L + S + +
Sbjct: 64 GGEQGATEATEPSGTVVFGEFAPELQVNIA--IRFAFDSASIAPDQRPALERMCSAMRQS 121
Query: 80 DC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYG 137
D F I GH D GS + + L RA V + V I+ASR++ GK
Sbjct: 122 DVGLFRIVGHTDAKGSDSYNETLSKLRAEEVRRWLVQDCGITASRLEALGMGK-RFLANP 180
Query: 138 HDEDAYAKNRRAIV 151
D A A+NRR
Sbjct: 181 ADPAA-AENRRVEF 193
>gi|257456150|ref|ZP_05621347.1| OmpA family protein [Treponema vincentii ATCC 35580]
gi|257446236|gb|EEV21282.1| OmpA family protein [Treponema vincentii ATCC 35580]
Length = 1355
Score = 52.5 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 48/124 (38%), Gaps = 12/124 (9%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADI------QVLSNLGSW-LEKHDCDFLIEGHADE--- 91
++ +V +F ++ +VL+ + + + +EGHA+
Sbjct: 1230 DKLKIAVPSIIFRKNAADFDGLEQNVVDRNIKVLTRIAEILNKFPEYKVQVEGHANNVSG 1289
Query: 92 --LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
+ I L RA AV + + RG+S SR+ G P D+D + KNRR
Sbjct: 1290 TEREEKEDLIPLSAARADAVRRFLIERGVSRSRLSSVGIGGTKPIASLSDKDNWWKNRRV 1349
Query: 150 IVFL 153
L
Sbjct: 1350 EFVL 1353
>gi|225159124|ref|ZP_03725430.1| OmpA/MotB domain protein [Opitutaceae bacterium TAV2]
gi|224802279|gb|EEG20545.1| OmpA/MotB domain protein [Opitutaceae bacterium TAV2]
Length = 199
Score = 52.5 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 39/197 (19%), Positives = 67/197 (34%), Gaps = 46/197 (23%)
Query: 1 MQ--YSTIFIILSAITMMSISGIDNLDTKI----------------------SSPDTVLN 36
M I++ ++ +G + ++P L
Sbjct: 1 MNVLLRKALFIIAGSAVIFAAGCKKKPVRPDPQSTLIGQTPGGNDTHSSGLNTTPFGDLT 60
Query: 37 ESSLQEQFSSSVG--------------------DSVFFDTSSYSIRPADIQVLSNLGSWL 76
S L S G SV+F ++R + + + ++L
Sbjct: 61 PSPLPAGLVSDTGSGLQLGTTDASHGNQIRDAVQSVYFAFDQSAVRQEERAKIQDAQNYL 120
Query: 77 EKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
H L+EG D G+ ++ LG RRA +V Y GI+A+R+++ S G +V
Sbjct: 121 NAHPDQRVLLEGRCDWRGTAEYNLGLGDRRANSVRQYLQDLGIAANRIEILSKGDLE-AV 179
Query: 136 YGHDEDAYAKNRRAIVF 152
D AK+RR
Sbjct: 180 ENADAATAAKDRRVDFV 196
>gi|326773952|ref|ZP_08233234.1| OmpA family protein [Actinomyces viscosus C505]
gi|326636091|gb|EGE36995.1| OmpA family protein [Actinomyces viscosus C505]
Length = 199
Score = 52.5 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 47/125 (37%), Gaps = 8/125 (6%)
Query: 34 VLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADEL 92
+ SS + +S+ V FD S ++ QVL + K + GH D +
Sbjct: 73 AVTYSSDGQTTVASLSGDVTFDVDSSALTDRAKQVLDEIVKRWNGKPPATVTVVGHTDSV 132
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH------DEDAYAKN 146
+ L +RA AV +Y ++ + ++ + G+ P +E A N
Sbjct: 133 ADDAHNQTLSEQRAKAVADYLTSKVP-SLNVQSSGKGESEPVASETNADGSVNEAGKAAN 191
Query: 147 RRAIV 151
R V
Sbjct: 192 RHVDV 196
>gi|76789924|gb|ABA55070.1| OmpA family protein [Riemerella anatipestifer]
Length = 384
Score = 52.5 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
V+FD + V++ ++ + L+ GH D G+ + L RRA V
Sbjct: 280 VYFDFDRSDLTAEARSVVTQAANYAKSGAPTRVLVVGHTDTSGNAAYNQGLSNRRARTVA 339
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ VA+G++ + + G+ P+ D NRRA V +
Sbjct: 340 DALVAQGVNGGVISLDGKGETQPAKATGDGVREPLNRRATVDI 382
>gi|295133926|ref|YP_003584602.1| OmpA/MotB family outer hypothetical protein [Zunongwangia profunda
SM-A87]
gi|294981941|gb|ADF52406.1| OmpA/MotB family outer membrane protein [Zunongwangia profunda
SM-A87]
Length = 281
Score = 52.5 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 42/117 (35%), Gaps = 7/117 (5%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELG-----SRNS 97
+V D + F + SY + +L L + ++EGH D
Sbjct: 148 VMINVSDKLLFRSGSYRLSNDAQPLLKKLAEVINSEPSMEVMVEGHTDNRTMVEDSWLED 207
Query: 98 SIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L +RRA AV + +++ P V +D AKNRR + +
Sbjct: 208 NWDLSVRRATAVVRQLQDKYDVDGAKLIAAGRSSYSPLVENTSKDNMAKNRRTRIVV 264
>gi|171060501|ref|YP_001792850.1| peptidoglycan-associated lipoprotein [Leptothrix cholodnii SP-6]
gi|170777946|gb|ACB36085.1| peptidoglycan-associated lipoprotein [Leptothrix cholodnii SP-6]
Length = 182
Score = 52.5 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 49/163 (30%), Positives = 67/163 (41%), Gaps = 24/163 (14%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESS-----------------------LQEQFSSSVG 49
+ + + + L + S
Sbjct: 17 CSSTPPAPAPAPAPAPVAAAPAPAPAPAPTPAAAAPAPAPQVAAAALAPHLDPNHAISKQ 76
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYA 108
SVFFD + IR D V+ G +L +IEG+ADE GSR ++ALG +RA A
Sbjct: 77 RSVFFDFDEFVIRTQDRPVVELHGKYLASTPALKVVIEGNADERGSREYNLALGNKRAQA 136
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
V F G + +M+ SYG+E P GHDE A+AKNRRA V
Sbjct: 137 VVQSFKLLGAADGQMEAISYGEERPMDAGHDEAAWAKNRRADV 179
>gi|332664542|ref|YP_004447330.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332333356|gb|AEE50457.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 226
Score = 52.5 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 38/100 (38%), Gaps = 1/100 (1%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F + PA L+ L + + F I H +G ++ L RA ++
Sbjct: 124 FVPEQADVLPAMKPELTQLANIMAAFPEFKFQIAAHTAGVGDHILNLTLSHHRATSIVEA 183
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
G++ SRMK YG E+P + N+R +
Sbjct: 184 LEKMGVAKSRMKARGYGDELPIADHTMPEGREANQRIELT 223
>gi|108761761|ref|YP_631366.1| OmpA domain-containing protein [Myxococcus xanthus DK 1622]
gi|108465641|gb|ABF90826.1| OmpA domain protein [Myxococcus xanthus DK 1622]
Length = 449
Score = 52.5 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 42/143 (29%), Gaps = 3/143 (2%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+S + + ++ ++ ++ + F + R L+ L
Sbjct: 303 VTLSREAVPTVSFTLAKAPVSKSQKVRLKKEVVELPRMPRFAEKQAAPRNGTTAGLALLM 362
Query: 74 SWL-EKHDCDFLIEGHADELGSRNS--SIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
IEGH D + L RA AV V G+ ASR++ G
Sbjct: 363 DMFVRDEKLRLRIEGHTDNRERPAAAARKTLSEARAAAVAKALVDAGLDASRIETVGLGD 422
Query: 131 EMPSVYGHDEDAYAKNRRAIVFL 153
P NRR L
Sbjct: 423 TRPKAPNLLPRGRELNRRVEFVL 445
>gi|315453529|ref|YP_004073799.1| putative flagellar motor protein [Helicobacter felis ATCC 49179]
gi|315132581|emb|CBY83209.1| putative flagellar motor protein [Helicobacter felis ATCC 49179]
Length = 253
Score = 52.5 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 44/136 (32%), Gaps = 7/136 (5%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE--KHDCDFLIEGH 88
+ + E + Q +F + +I + + + S + + G+
Sbjct: 103 GEGSVLEQTDQGSVLKLPSSLIFTEPYGDTINATMQEYIGRIASIIRALPSQVQINVRGY 162
Query: 89 ADE-----LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
D AL RA V +A GI+ ++ TSYG P V +
Sbjct: 163 TDNTPIPAHIPFKDHYALAASRASKVMRELIADGINPQKLSFTSYGANNPIVPNDSIENR 222
Query: 144 AKNRRAIVFLKGCRAN 159
+N R +F N
Sbjct: 223 MRNNRVEIFFSTNPEN 238
>gi|288956961|ref|YP_003447302.1| hypothetical protein AZL_001200 [Azospirillum sp. B510]
gi|288909269|dbj|BAI70758.1| hypothetical protein AZL_001200 [Azospirillum sp. B510]
Length = 73
Score = 52.5 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
++ G D G+R +++ L +RA + + RG+ V G ++P E+
Sbjct: 1 MVLIGFTDAQGARAANVTLSQQRAQIIADELRRRGVQVQ--SVMGLGPDLPVTSNDTEEG 58
Query: 143 YAKNRRAIVFLK 154
KNRR V+L+
Sbjct: 59 RDKNRRVEVWLR 70
>gi|170739239|ref|YP_001767894.1| OmpA/MotB domain-containing protein [Methylobacterium sp. 4-46]
gi|168193513|gb|ACA15460.1| OmpA/MotB domain protein [Methylobacterium sp. 4-46]
Length = 178
Score = 52.5 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 42/105 (40%), Gaps = 6/105 (5%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGLRRAYA 108
V FD +S + A Q L L FL+EGH D G ++ L RRA A
Sbjct: 74 VNFDYNSDQLTGAAKQNLDEFAKALRDDRLRSSTFLVEGHTDARGGEEFNLGLSGRRADA 133
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V Y RG+ A+++ GK P + NRR L
Sbjct: 134 VVRYLSGRGVLAAQLTARGLGKSRPLTDNPLD---PANRRVETRL 175
>gi|262193343|ref|YP_003264552.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
gi|262076690|gb|ACY12659.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
Length = 254
Score = 52.5 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 7/103 (6%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADELGSRNSSIALGLRRAYA 108
+V+FD IR +VL+ + + D +EGH D G+ ++AL RRA
Sbjct: 154 TVYFDFDEAGIRDDAREVLTQAAECIRQAPADSGVYVEGHTDGSGTEEYNVALSERRART 213
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
V + GI R V + G+ +P + K+RR
Sbjct: 214 VTEFLERLGIDPGRFSVIAKGEGVP-----SGEGTDKDRRVEF 251
>gi|218508705|ref|ZP_03506583.1| hypothetical protein RetlB5_14646 [Rhizobium etli Brasil 5]
Length = 56
Score = 52.5 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 20/56 (35%)
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A + R++ G P H + A+NRR + + +
Sbjct: 1 SLARASAAAEIIKSMMDDPGRVREEGRGSGEPVASNHTPEGRARNRRIQIIITKTQ 56
>gi|257125161|ref|YP_003163275.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b]
gi|257049100|gb|ACV38284.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b]
Length = 366
Score = 52.5 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 27/76 (35%), Gaps = 2/76 (2%)
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM--KVTSYGKEMPSVYGHD 139
GH D GS + L + RA V G+ + +T G+ P+
Sbjct: 280 SIDFVGHTDSTGSDAYNQKLSVARAQNVARLLREYGLKNTISYGTITGQGESNPADTNDT 339
Query: 140 EDAYAKNRRAIVFLKG 155
D NRR +F +
Sbjct: 340 TDGRYNNRRVELFFQN 355
>gi|26989809|ref|NP_745234.1| OmpA domain-containing protein [Pseudomonas putida KT2440]
gi|24984708|gb|AAN68698.1|AE016499_3 OmpA domain protein [Pseudomonas putida KT2440]
Length = 831
Score = 52.5 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 49/135 (36%), Gaps = 12/135 (8%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSI---RPADIQVLSNLGSW--LEKHDCDFLIEG 87
L SL+ + ++ F + LS + S + +I G
Sbjct: 695 DSLRAQSLRAIETITLESDTLFAFGRADFQSLKNEGQHQLSAIASKLLNTPNIGKIIISG 754
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK-- 145
HAD+LG ++ + +RA + Y V +G+ A + G P V + +
Sbjct: 755 HADQLGDSQGNLQVSKQRAQTIRTYLVGKGVPAELVVAQGEGSRKPLVNCDMQQPRTQLI 814
Query: 146 -----NRRAIVFLKG 155
NRR + ++G
Sbjct: 815 KCLEPNRRVEIEVRG 829
>gi|86146029|ref|ZP_01064356.1| Outer membrane protein [Vibrio sp. MED222]
gi|85836234|gb|EAQ54365.1| Outer membrane protein [Vibrio sp. MED222]
Length = 278
Score = 52.5 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 1/116 (0%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNS 97
S+ EQ + F +S + P + L+ + + D ++ GHAD G+
Sbjct: 150 SVIEQLYDLLNVDNQFAENSTEVNPKYMGRLAEATTLLNKHKSLDLVVTGHADATGTEKF 209
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L L RA V Y G+ A R+K S G+ +P G + NRR + +
Sbjct: 210 NDDLALGRAKQVERYLTIFGLGAQRIKAVSVGETVPLFEGESDGTRLTNRRVSIEI 265
>gi|84385524|ref|ZP_00988555.1| Outer membrane protein [Vibrio splendidus 12B01]
gi|84379504|gb|EAP96356.1| Outer membrane protein [Vibrio splendidus 12B01]
Length = 278
Score = 52.5 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 1/116 (0%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNS 97
S+ EQ + F +S + P + L+ + L++H D ++ GHAD G+
Sbjct: 150 SVIEQLYDLLNVDNQFAENSTEVNPKYMGRLAEATTLLKEHKSLDLVVTGHADATGTEEY 209
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L L RA V Y G+ A R+K S G+ +P G + NRR + +
Sbjct: 210 NDDLALGRAKQVERYLTIFGLGAQRIKAVSVGETVPLFEGESDGTRLTNRRVSIEI 265
>gi|148547849|ref|YP_001267951.1| OmpA/MotB domain-containing protein [Pseudomonas putida F1]
gi|148511907|gb|ABQ78767.1| OmpA/MotB domain protein [Pseudomonas putida F1]
Length = 831
Score = 52.5 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 49/135 (36%), Gaps = 12/135 (8%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSI---RPADIQVLSNLGSW--LEKHDCDFLIEG 87
L SL+ + ++ F + LS + S + +I G
Sbjct: 695 DSLRAQSLRAIETITLESDTLFAFGRADFQSLKNEGQHQLSAIASKLLNTPNIGKIIISG 754
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK-- 145
HAD+LG ++ + +RA + Y V +G+ A + G P V + +
Sbjct: 755 HADQLGDSQGNLQVSKQRAQTIRTYLVGKGVPAELVVAQGEGSRKPLVNCDMQQPRTQLI 814
Query: 146 -----NRRAIVFLKG 155
NRR + ++G
Sbjct: 815 KCLEPNRRVEIEVRG 829
>gi|218261435|ref|ZP_03476250.1| hypothetical protein PRABACTJOHN_01916 [Parabacteroides johnsonii
DSM 18315]
gi|218224010|gb|EEC96660.1| hypothetical protein PRABACTJOHN_01916 [Parabacteroides johnsonii
DSM 18315]
Length = 52
Score = 52.5 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 16/38 (42%)
Query: 115 ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
G+ +++ G+ MP D AKNRR +
Sbjct: 1 DYGVKPLQIQPCGRGEFMPVDDNETADGRAKNRRTEII 38
>gi|91792756|ref|YP_562407.1| OmpA/MotB [Shewanella denitrificans OS217]
gi|91714758|gb|ABE54684.1| OmpA/MotB [Shewanella denitrificans OS217]
Length = 289
Score = 52.5 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 31/72 (43%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
LI+G D G ++ + + RA ++ +A GI ++ +G++
Sbjct: 215 VLIDGFTDSYGPKSINQTVSNNRADSIKQLLIASGIPKDKIISNGHGEKRHVASNELVQE 274
Query: 143 YAKNRRAIVFLK 154
+NRR ++ L
Sbjct: 275 RERNRRVVIQLS 286
>gi|320538522|ref|ZP_08038383.1| OmpA family protein [Treponema phagedenis F0421]
gi|320144629|gb|EFW36384.1| OmpA family protein [Treponema phagedenis F0421]
Length = 1347
Score = 52.1 bits (123), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 24/54 (44%)
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L +RA A+ Y + G+ ASR+ G P D + + KNRR L
Sbjct: 1292 PLSEKRAEAIRQYLIENGVRASRLTAEGKGGTEPVADFTDRNNWWKNRRVEFIL 1345
>gi|16125000|ref|NP_419564.1| OmpA family protein [Caulobacter crescentus CB15]
gi|221233721|ref|YP_002516157.1| heat resistant agglutinin [Caulobacter crescentus NA1000]
gi|13421980|gb|AAK22732.1| OmpA family protein [Caulobacter crescentus CB15]
gi|220962893|gb|ACL94249.1| heat resistant agglutinin [Caulobacter crescentus NA1000]
Length = 407
Score = 52.1 bits (123), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 1/103 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEK-HDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
V+F Y + P V+ + + + ++ GH D GS + L RR AV
Sbjct: 302 VYFPFDQYVLTPEAQAVVQQAADYAKGGNATRVVVTGHTDTSGSDAYNRKLSERRGRAVA 361
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ V G++A+ + V G++ P+V D NRR+ V +
Sbjct: 362 DGLVGMGLNAATVAVDWKGEKAPAVETGDGVKEPLNRRSSVSI 404
>gi|288225943|gb|ADC44456.1| OmpA [Enterobacter sp. i1]
Length = 111
Score = 52.1 bits (123), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIALGL 103
++ V F+ + +++P L L S L + D ++ G+ D +GS + L
Sbjct: 21 TLKSDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSE 80
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
RRA +V +Y +++GI A ++ G+ P
Sbjct: 81 RRAQSVVDYLISKGIPADKISARGMGESNPV 111
>gi|126662707|ref|ZP_01733706.1| possible outer membrane protein [Flavobacteria bacterium BAL38]
gi|126626086|gb|EAZ96775.1| possible outer membrane protein [Flavobacteria bacterium BAL38]
Length = 283
Score = 52.1 bits (123), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 44/108 (40%), Gaps = 4/108 (3%)
Query: 50 DSVFFDTSSYSIRPA-DIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
S+FF+ + ++++ V++ + I G+ D+ G + L RA
Sbjct: 25 HSIFFEFNKFNLKEEQADAVVAFVSKIDTSRIESVQIFGYCDDRGKDAYNYTLSTNRANT 84
Query: 109 VFNYFVARGISASRMKV-TSYGKEMPSVYGHD--EDAYAKNRRAIVFL 153
V + + +GI + + G+ M +A +KNRR V +
Sbjct: 85 VKDKLIEKGIKSKIIITLEGKGRIMLDEDMQTNIPEARSKNRRVDVVV 132
>gi|21114987|gb|AAM42970.1| chemotaxis protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
Length = 89
Score = 52.1 bits (123), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 27/62 (43%)
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D + L +RA V +A G+ AS + ++G + P DE AKNRR
Sbjct: 13 DSNRRYADNWELSAQRALTVTRALIAEGVPASSVFAAAFGSQQPVDSNADETRRAKNRRV 72
Query: 150 IV 151
+
Sbjct: 73 EI 74
>gi|297183087|gb|ADI19231.1| flagellar motor protein [uncultured delta proteobacterium
HF0200_14D13]
Length = 211
Score = 52.1 bits (123), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 58/170 (34%), Gaps = 22/170 (12%)
Query: 6 IFIILSAITM--MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRP 63
F++L+ ++ + SG+++ + + S + S+ F + ++
Sbjct: 24 FFVLLTVLSTQPKNCSGLESFMKENARLFKNYQLRSTKLSCIVSLPQDFLFRSGDAELKA 83
Query: 64 ADIQVLSNLGSWLEKHDCD----FLIEGHADELGSR----NSSIALGLRRAYAVFNYFVA 115
I+VL+ + +EGHAD L S+ L RA V +
Sbjct: 84 GAIRVLTPFFQKIRDLPEHQGDLVTVEGHADNLPIHTDKYPSNWELSTARATNVATMLIN 143
Query: 116 RGIS-ASRMKVTSYGKEMPSVYGHD-----------EDAYAKNRRAIVFL 153
R + + V Y P V D E A NRR + +
Sbjct: 144 RMGYASDTLSVNGYSDTRPKVSYKDARGNALRGTALEVARRTNRRVEIVI 193
>gi|163800821|ref|ZP_02194721.1| putative outer membrane protein [Vibrio sp. AND4]
gi|159175170|gb|EDP59967.1| putative outer membrane protein [Vibrio sp. AND4]
Length = 204
Score = 52.1 bits (123), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 63/189 (33%), Gaps = 31/189 (16%)
Query: 1 MQYSTIFIILSAITMMSIS-------------GIDNLDTKISSPDTVLNESSL------- 40
M+ + I +L I + D + D V+N L
Sbjct: 1 MKATKILFVLGTILTTQHALAEDEYDYAETPKAEQVADLQDDDNDGVINARDLCPATPEF 60
Query: 41 ----QEQFSSSVGD------SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHA 89
+ + + F S + + + L +L ++ + G+A
Sbjct: 61 SEINNDGCEEYIKSSERMEVRILFSNDSDDVDTVYRRQIGELSEFLNEYPSTSIELRGYA 120
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
++G ++ L RRA V + GI +R+++ G G DE ++A NRR
Sbjct: 121 SKVGGSEHNLDLSKRRASNVRTALLGYGIDPARVRIVGLGDTHLEQQGTDEVSHALNRRV 180
Query: 150 IVFLKGCRA 158
+ G +
Sbjct: 181 TASVIGYKG 189
>gi|119468930|ref|ZP_01611955.1| hypothetical protein ATW7_04182 [Alteromonadales bacterium TW-7]
gi|119447582|gb|EAW28849.1| hypothetical protein ATW7_04182 [Alteromonadales bacterium TW-7]
Length = 244
Score = 52.1 bits (123), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 51/121 (42%), Gaps = 1/121 (0%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADE 91
NE Q Q ++ + +V F T S +I P + L + + + G AD+
Sbjct: 110 AQQNEQLTQSQINNLLAMTVQFKTGSSTIAPHFAKQLDQLVVLLNNQPQLALDLSGFADQ 169
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
G ++ L +R AV +Y + G+S R+ ++G++ + + +RR +
Sbjct: 170 RGDEQANFLLSKKRVNAVQSYLIKHGVSHKRLSTQAFGEQHTLANSNTIEDNFFDRRVTL 229
Query: 152 F 152
Sbjct: 230 T 230
>gi|88798977|ref|ZP_01114558.1| OmpA/MotB [Reinekea sp. MED297]
gi|88778204|gb|EAR09398.1| OmpA/MotB [Reinekea sp. MED297]
Length = 300
Score = 52.1 bits (123), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 54/130 (41%), Gaps = 8/130 (6%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADE 91
+ ++ ++ ++ F ++ + VL++L L++H + GHAD
Sbjct: 171 DISITTAADGTTLINIPLTLLFANTNLDLANDAETVLTSLSEVLKQHPDRRVQVIGHADA 230
Query: 92 LG-------SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+ ++ L RA V + + +G+S R+ + P G +E+ ++
Sbjct: 231 RPIVSDLAQTYPTNWELSSARASRVVTFLIDQGVSDHRLLASGRAANQPVRDGANEEDWS 290
Query: 145 KNRRAIVFLK 154
NRR V ++
Sbjct: 291 VNRRIEVQIQ 300
>gi|242310593|ref|ZP_04809748.1| OmpA/MotB [Helicobacter pullorum MIT 98-5489]
gi|239522991|gb|EEQ62857.1| OmpA/MotB [Helicobacter pullorum MIT 98-5489]
Length = 251
Score = 52.1 bits (123), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 43/138 (31%), Gaps = 8/138 (5%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVL---SNLGSWLEK 78
D + S F + FD + +++ A+ ++ L
Sbjct: 75 DFKENTRVSLGPSTIIDEGSRGFILRFNGKLLFDKNETTLKNAEEKLFLKRMALILQKMP 134
Query: 79 HDCDFLIEGHADELGS-----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
+ + G+ D+ ++ L RA V + G++ ++ G
Sbjct: 135 ANMHLDVIGYTDDSQIIPTQKYQDNLGLSAMRALGVARVLIENGVNPQKITSLGNGATNF 194
Query: 134 SVYGHDEDAYAKNRRAIV 151
+ E+ A+NRR
Sbjct: 195 VLPNTTEENKAQNRRVEF 212
>gi|254706492|ref|ZP_05168320.1| flagellar motor protein MotB [Brucella pinnipedialis M163/99/10]
Length = 284
Score = 52.1 bits (123), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 47/142 (33%), Gaps = 9/142 (6%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSNLGSWL 76
+ P + ++ + D V F S +Q+L + +
Sbjct: 142 APNAGKAAKPEPMPDVTVVPVEGGVMIQLTDKVDYGMFTIGSAKPDARVVQMLERIAQVI 201
Query: 77 EKHDCDFLIEGHADELGSR---NSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEM 132
+ + +I GH D + + L RA + V G+ R ++V Y
Sbjct: 202 ARQPGEVIISGHTDARPFKSATYDNRRLSSARAQMAYYMLVRGGLDEKRVLRVEGYADRH 261
Query: 133 PSVYGHDEDAYAKNRRAIVFLK 154
P A+NRR +F+K
Sbjct: 262 PKNPNDPNA--AENRRIDIFIK 281
>gi|312885105|ref|ZP_07744791.1| OmpA family protein [Vibrio caribbenthicus ATCC BAA-2122]
gi|309367234|gb|EFP94800.1| OmpA family protein [Vibrio caribbenthicus ATCC BAA-2122]
Length = 1569
Score = 52.1 bits (123), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 45/134 (33%), Gaps = 14/134 (10%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSY-----SIRPADIQVLSNLGSWLEKHDCDFLI 85
D V + D+ F +S + Q + + + +I
Sbjct: 596 QDGVSIVEGTVGDLKVRL-DATHFAFNSDKIQVLEEKGNPYQTIGANLAKIAHSPFQIVI 654
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVA------RGISASRMKVTSYGKEMPS--VYG 137
GH ++GS ++ L ++RA AV N + R ++G P
Sbjct: 655 AGHTCDIGSEEVNLNLSMKRAIAVKNAILNAISGEGRQAWEGMFVTEAHGFSKPLPGNEN 714
Query: 138 HDEDAYAKNRRAIV 151
+E AKNRR +
Sbjct: 715 RNEHERAKNRRVEI 728
>gi|257093018|ref|YP_003166659.1| OmpA/MotB domain-containing protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257045542|gb|ACV34730.1| OmpA/MotB domain protein [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 566
Score = 52.1 bits (123), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 46/125 (36%), Gaps = 13/125 (10%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS--NLGSWLEKHDCDFLIEGHADELGSR 95
+ +++ + +V F + S + + + + F + G+ D GSR
Sbjct: 436 EATKKEAIVTKPVTVGFPSGSAELSKRAEKTVDSEMVPFIENNGKAYFEVSGNTDSTGSR 495
Query: 96 NSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHD--------EDAYAKN 146
+ L RA AV +Y V + R K+ YG + P + ED A N
Sbjct: 496 EVNQRLSAARARAVVDYLVKQWEFPRERFKIVGYGPDRPLCNEVNAAIEGLSLEDCRAIN 555
Query: 147 R--RA 149
R R
Sbjct: 556 RTTRV 560
>gi|261313945|ref|ZP_05953142.1| flagellar motor protein MotB [Brucella pinnipedialis M163/99/10]
gi|261302971|gb|EEY06468.1| flagellar motor protein MotB [Brucella pinnipedialis M163/99/10]
Length = 283
Score = 52.1 bits (123), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 47/142 (33%), Gaps = 9/142 (6%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSNLGSWL 76
+ P + ++ + D V F S +Q+L + +
Sbjct: 141 APNAGKAAKPEPMPDVTVVPVEGGVMIQLTDKVDYGMFTIGSAKPDARVVQMLERIAQVI 200
Query: 77 EKHDCDFLIEGHADELGSR---NSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEM 132
+ + +I GH D + + L RA + V G+ R ++V Y
Sbjct: 201 ARQPGEVIISGHTDARPFKSATYDNRRLSSARAQMAYYMLVRGGLDEKRVLRVEGYADRH 260
Query: 133 PSVYGHDEDAYAKNRRAIVFLK 154
P A+NRR +F+K
Sbjct: 261 PKNPNDPNA--AENRRIDIFIK 280
>gi|254512328|ref|ZP_05124395.1| OmpA domain protein [Rhodobacteraceae bacterium KLH11]
gi|221536039|gb|EEE39027.1| OmpA domain protein [Rhodobacteraceae bacterium KLH11]
Length = 515
Score = 52.1 bits (123), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 37/108 (34%), Gaps = 7/108 (6%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEK---HDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
F+ S + L LE G +D G+ S+ + LRRA V
Sbjct: 408 FEPGSSHPDAQSRSNILQLAQALENGTLDASHLAFVGFSDGDGAAASNTRIALRRARTVR 467
Query: 111 NYF----VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
N + + V +G+ MP E NRR V+++
Sbjct: 468 NAVLGAVETSIPDSIEITVEGFGEAMPMACDDTEWGRKVNRRVEVWVR 515
>gi|221200311|ref|ZP_03573353.1| OmpA family protein [Burkholderia multivorans CGD2M]
gi|221205990|ref|ZP_03579004.1| OmpA family protein [Burkholderia multivorans CGD2]
gi|221174002|gb|EEE06435.1| OmpA family protein [Burkholderia multivorans CGD2]
gi|221179652|gb|EEE12057.1| OmpA family protein [Burkholderia multivorans CGD2M]
Length = 277
Score = 52.1 bits (123), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 6/81 (7%)
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV---YG 137
+ GH D +GS S+ AL RA V Y VA G+ A+R++V G P G
Sbjct: 195 TRIDVVGHTDRIGSDQSNRALSRARAETVKRYLVAHGLDAARIRVEGAGSSQPVSHCPSG 254
Query: 138 HDE---DAYAKNRRAIVFLKG 155
K+RR + + G
Sbjct: 255 ETPAVIACLQKDRRVTITVYG 275
>gi|312884808|ref|ZP_07744500.1| hypothetical protein VIBC2010_03887 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309367460|gb|EFP95020.1| hypothetical protein VIBC2010_03887 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 266
Score = 52.1 bits (123), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLE--KHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
+FF + S+ + LS S+++ + L++G++D GS ++ L +RA A
Sbjct: 149 DLFFASGKSSLSSEQRETLSAFYSYIKVADNINRILVDGYSDSAGSSVVNLQLSRQRAQA 208
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+Y G + ++V ++G+ AKNRR + L
Sbjct: 209 AADYLQFLGTEQNLIEVRAHGERYLFNNNASNSG-AKNRRVTLRL 252
>gi|71907931|ref|YP_285518.1| OmpA/MotB [Dechloromonas aromatica RCB]
gi|71847552|gb|AAZ47048.1| OmpA/MotB [Dechloromonas aromatica RCB]
Length = 225
Score = 52.1 bits (123), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 46/134 (34%), Gaps = 4/134 (2%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ + P+ S+ + S ++ V F S + PA L+ + S L
Sbjct: 86 AAPSFPAQSIPPEPATPPSTPKIDTSRTI--IVQFGLGSAMLSPAARSSLNEVMSAL-LS 142
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVYGH 138
I G D G + +L L RA AV ++ ++ + V + G
Sbjct: 143 ARQITIIGRTDNTGPLAFNESLALARALAVRDHLLSTHPMLTPTLSVKARGTCCFIAAND 202
Query: 139 DEDAYAKNRRAIVF 152
+NRR +
Sbjct: 203 TLAGRTQNRRVELV 216
>gi|251733467|emb|CAR82483.1| pal [Agrobacterium vitis]
Length = 87
Score = 52.1 bits (123), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/85 (43%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 56 TSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
T S SIR Q L W +EGHADE G+R ++ALG RRA + Y V
Sbjct: 1 TDSTSIRADAQQTLDRQAQWLQRYSQYPITVEGHADERGTREYNLALGARRAASTKAYLV 60
Query: 115 ARGISASRMKVTSYGKEMPSVYGHD 139
+RGI A+R+K SYGKE P D
Sbjct: 61 SRGIPANRIKTISYGKERPVATCDD 85
>gi|114570410|ref|YP_757090.1| OmpA/MotB domain-containing protein [Maricaulis maris MCS10]
gi|114340872|gb|ABI66152.1| OmpA/MotB domain protein [Maricaulis maris MCS10]
Length = 359
Score = 52.1 bits (123), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 1/109 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLR 104
V V+F+ S ++ V++ + + G D G+ + ++ L R
Sbjct: 248 DDVSFPVYFEWDSSTLTAQARAVIAQASNQRGSCGVTRVTVAGFTDRSGAASYNVGLSER 307
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA V V G+ AS + + ++G+ +V D NRR V +
Sbjct: 308 RARVVREELVRLGVPASTISMEAFGETRNAVATADGVREPLNRRTEVVI 356
>gi|229121280|ref|ZP_04250511.1| OmpA/MotB domain protein [Bacillus cereus 95/8201]
gi|228662125|gb|EEL17734.1| OmpA/MotB domain protein [Bacillus cereus 95/8201]
Length = 224
Score = 52.1 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 45/118 (38%), Gaps = 5/118 (4%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ +N S + D++ FDT +++P +++S L + + ++EGH D
Sbjct: 100 SQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKEIISQLVGFFQSVPNPIVVEGHTDSR 159
Query: 93 GSRNS----SIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
N + L RA + ++ + + R+ Y P V + K
Sbjct: 160 PIHNDKFPSNWELSSARAANMIHHLIEVYNVDDKRLAAVGYADTKPVVPNDSPQNWEK 217
>gi|167578636|ref|ZP_02371510.1| hypothetical protein BthaT_10878 [Burkholderia thailandensis TXDOH]
gi|167616778|ref|ZP_02385409.1| hypothetical protein BthaB_10778 [Burkholderia thailandensis Bt4]
gi|257140710|ref|ZP_05588972.1| hypothetical protein BthaA_16123 [Burkholderia thailandensis E264]
Length = 575
Score = 52.1 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 36/125 (28%), Gaps = 14/125 (11%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RN 96
+ + FD +RP + + LG D + GH D
Sbjct: 363 PQGWLLVFKSDGAFDVGKAKVRPDFMHNIERLGLAFAPWPGDLEVIGHTDSRPIRTSEFP 422
Query: 97 SSIALGLRRAYAVFNYFVA----------RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ AL RA V + A ++ + G P AY +N
Sbjct: 423 DNQALSEARARTVADELRATALPGGARAPENAVQRNIEYSGRGDAQPIDTAKTAAAYERN 482
Query: 147 RRAIV 151
RR V
Sbjct: 483 RRVDV 487
>gi|167572326|ref|ZP_02365200.1| hypothetical protein BoklC_20981 [Burkholderia oklahomensis C6786]
Length = 470
Score = 52.1 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 36/125 (28%), Gaps = 14/125 (11%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RN 96
+ + FD +RP + + LG D + GH D
Sbjct: 266 PQGWLLVFKSDGAFDVGKAKVRPDFMHNIERLGLAFAPWPGDLEVIGHTDSRPIRTSEFP 325
Query: 97 SSIALGLRRAYAVFNYFVA----------RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ AL RA V + A ++ + G P AY +N
Sbjct: 326 DNQALSEARARTVADELRATALPGGARAPENAVQRNIEYSGRGDAQPIDTAKTAAAYERN 385
Query: 147 RRAIV 151
RR V
Sbjct: 386 RRVDV 390
>gi|282159136|gb|ADA78527.1| peptidoglycan-associated lipoprotein, OmpA family [Francisella
tularensis subsp. tularensis NE061598]
Length = 206
Score = 52.1 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 67/195 (34%), Gaps = 44/195 (22%)
Query: 1 MQYSTI-FIILSAITMMSISGIDNLDTKISSPDTVLNESSLQ------------------ 41
M+ I ++ ++ M++ D D S Q
Sbjct: 1 MKKRIINLAVIGSMLMLASCSSTRPDNSDLIKDKYAGVDSSQALEMSSQIYGSDKLSSDQ 60
Query: 42 -EQFSSSVGDS----VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
EQ + + V+F SY+I + L + + D + G+ D GS
Sbjct: 61 VEQMKKELMNINCRSVYFGFDSYNITDDAKECLDKTADYLIAHPDQPIKLSGNTDPRGSE 120
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG------------------ 137
+ LG +RA AV+NY + + ++ ++ V SYGK P+
Sbjct: 121 KYNFNLGQKRAEAVYNYLLGKNVNKDQICVVSYGKLKPAAEPTQFYDEFCKDGVNDACMY 180
Query: 138 -HDEDAYAKNRRAIV 151
E A+ +RR +
Sbjct: 181 KASEKAFYLDRRTEI 195
>gi|167722110|ref|ZP_02405346.1| hypothetical protein BpseD_24064 [Burkholderia pseudomallei DM98]
Length = 43
Score = 52.1 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 16/41 (39%)
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ G+ ASR++ G P A NRR + +
Sbjct: 1 LQSAGVPASRLEALGKGGAEPIGDNRTPQGRALNRRVEITV 41
>gi|212635870|ref|YP_002312395.1| OmpA protein [Shewanella piezotolerans WP3]
gi|212557354|gb|ACJ29808.1| OmpA [Shewanella piezotolerans WP3]
Length = 249
Score = 52.1 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 59/136 (43%), Gaps = 1/136 (0%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-K 78
+ + T L + Q+ ++G +V F T S +I P Q L ++ +
Sbjct: 102 ALSSQYEDAQQQLTSLKMAQEQKLTELALGLNVQFKTGSSTIEPHFQQQLDDVAYAMSLS 161
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ + G+AD G + + AL +R V NY VA+G++ R+ +YG P
Sbjct: 162 PELTLDLTGYADRRGDGDYNQALSEQRVAEVTNYLVAQGVANERLNYQAYGASSPLTAEQ 221
Query: 139 DEDAYAKNRRAIVFLK 154
+ + +RR + L+
Sbjct: 222 NFENDFFDRRVTLKLQ 237
>gi|313672698|ref|YP_004050809.1| ompa/motb domain protein [Calditerrivibrio nitroreducens DSM 19672]
gi|312939454|gb|ADR18646.1| OmpA/MotB domain protein [Calditerrivibrio nitroreducens DSM 19672]
Length = 276
Score = 52.1 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 56/145 (38%), Gaps = 9/145 (6%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ T++S + S+ E V D + F + S S+ VL L + L +
Sbjct: 121 VVKTQLSEFSDQIMVSTTPEGIRIDVIDKTGNPIFSSGSASLNTNGKAVLKVLANTLNEL 180
Query: 80 DCDFLIEGHADELGSR---NSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSV 135
+IEGH D + R N + L ++RA + G A+++ V Y P V
Sbjct: 181 SNKIVIEGHTDAMTYRGDKNGNWDLSIQRANNARAELLLNGYDANKISSVAGYAATRPIV 240
Query: 136 YGHDEDAYAKNRRAIVFLKGCRANT 160
D NRR + +A T
Sbjct: 241 --KDNPNDPMNRRISFLILYDKATT 263
>gi|111220228|ref|YP_711022.1| hypothetical protein FRAAL0749 [Frankia alni ACN14a]
gi|111147760|emb|CAJ59419.1| Putative outer membrane protein [Frankia alni ACN14a]
Length = 186
Score = 52.1 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 49/117 (41%), Gaps = 4/117 (3%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNS 97
+ ++V FD++S +R + L + + +H + G++D LG
Sbjct: 74 TQPDGSQVTTVSADYLFDSNSSELRGEAMTALQQVLPAIREHPGPISVIGYSDGLGRTED 133
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ L L RA +V + + I +S + V G+ + G + + RR + L+
Sbjct: 134 NQKLSLERAKSVEAWLATQNIPSSVLDVEGRGE-QGAQDGVADASR---RRVEIVLR 186
>gi|170693033|ref|ZP_02884194.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
gi|170142031|gb|EDT10198.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
Length = 259
Score = 52.1 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV---YG 137
+ GH D +GS S+ AL RA V Y VA G+ A R++ + G P G
Sbjct: 177 TRIDVVGHTDRIGSDESNRALSQARAETVKAYLVAHGLDAERIRASGAGSSQPVSHCPPG 236
Query: 138 HDE---DAYAKNRRAIVFLKGCR 157
K+RR + + G R
Sbjct: 237 ETPAVIACLQKDRRVTIAIYGQR 259
>gi|62317962|ref|YP_223815.1| flagellar motor protein MotB [Brucella abortus bv. 1 str. 9-941]
gi|83269939|ref|YP_419230.1| flagellar motor protein MotB [Brucella melitensis biovar Abortus
2308]
gi|189023213|ref|YP_001932954.1| flagellar motor protein MotB [Brucella abortus S19]
gi|237817509|ref|ZP_04596499.1| Protein mbhA [Brucella abortus str. 2308 A]
gi|254691605|ref|ZP_05154859.1| flagellar motor protein MotB [Brucella abortus bv. 6 str. 870]
gi|254698194|ref|ZP_05160022.1| flagellar motor protein MotB [Brucella abortus bv. 2 str. 86/8/59]
gi|254731639|ref|ZP_05190217.1| flagellar motor protein MotB [Brucella abortus bv. 4 str. 292]
gi|256256793|ref|ZP_05462329.1| flagellar motor protein MotB [Brucella abortus bv. 9 str. C68]
gi|260544147|ref|ZP_05819968.1| OmpA/MotB domain-containing protein [Brucella abortus NCTC 8038]
gi|260757237|ref|ZP_05869585.1| flagellar motor protein MotB [Brucella abortus bv. 6 str. 870]
gi|260759398|ref|ZP_05871746.1| flagellar motor protein MotB [Brucella abortus bv. 4 str. 292]
gi|260762641|ref|ZP_05874973.1| flagellar motor protein MotB [Brucella abortus bv. 2 str. 86/8/59]
gi|260883041|ref|ZP_05894655.1| flagellar motor protein MotB [Brucella abortus bv. 9 str. C68]
gi|297250146|ref|ZP_06933847.1| chemotaxis protein MotB [Brucella abortus bv. 5 str. B3196]
gi|62198155|gb|AAX76454.1| MotB, chemotaxis protein [Brucella abortus bv. 1 str. 9-941]
gi|82940213|emb|CAJ13269.1| OmpA/MotB domain [Brucella melitensis biovar Abortus 2308]
gi|189021787|gb|ACD74508.1| OmpA/MotB domain protein [Brucella abortus S19]
gi|237787264|gb|EEP61482.1| Protein mbhA [Brucella abortus str. 2308 A]
gi|260097418|gb|EEW81292.1| OmpA/MotB domain-containing protein [Brucella abortus NCTC 8038]
gi|260669716|gb|EEX56656.1| flagellar motor protein MotB [Brucella abortus bv. 4 str. 292]
gi|260673062|gb|EEX59883.1| flagellar motor protein MotB [Brucella abortus bv. 2 str. 86/8/59]
gi|260677345|gb|EEX64166.1| flagellar motor protein MotB [Brucella abortus bv. 6 str. 870]
gi|260872569|gb|EEX79638.1| flagellar motor protein MotB [Brucella abortus bv. 9 str. C68]
gi|297174015|gb|EFH33379.1| chemotaxis protein MotB [Brucella abortus bv. 5 str. B3196]
Length = 366
Score = 52.1 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 49/140 (35%), Gaps = 7/140 (5%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+G + V E + Q + V D F S +Q+L + + +
Sbjct: 227 AGKAAKPEPMPDVTVVPVEGGVMSQLTDKV-DYGMFTIGSAKPDARVVQMLERIAQVIAR 285
Query: 79 HDCDFLIEGHADELGSR---NSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPS 134
+ +I GH D + + L RA + V G+ R ++V Y P
Sbjct: 286 QPGEVIISGHTDARPFKSATYDNRRLSSARAQMAYYMLVRGGLDEKRVLRVEGYADRHPK 345
Query: 135 VYGHDEDAYAKNRRAIVFLK 154
A+NRR +F+K
Sbjct: 346 NPNDPNA--AENRRIDIFIK 363
>gi|228964710|ref|ZP_04125817.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228794960|gb|EEM42459.1| OmpA/MotB domain protein [Bacillus thuringiensis serovar sotto str.
T04001]
Length = 223
Score = 51.7 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 44/118 (37%), Gaps = 5/118 (4%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ +N S + D++ FDT +++P ++S L + + ++EGH D
Sbjct: 99 SQVNVYREDTGVSVVIVDNLIFDTGDANVKPEAKGIISQLVGFFQSVPNPIVVEGHTDSR 158
Query: 93 GSRNS----SIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
N + L RA + ++ + + R+ Y P V + K
Sbjct: 159 PIHNEKFPSNWELSSARAANMIHHLIEVYNVDDKRLAAVGYADTKPIVPNDSPQNWEK 216
>gi|167913946|ref|ZP_02501037.1| hypothetical protein Bpse112_25907 [Burkholderia pseudomallei 112]
Length = 483
Score = 51.7 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 35/125 (28%), Gaps = 14/125 (11%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RN 96
+ + FD ++R + + LG D + GH D
Sbjct: 294 PQGWLLVFKSDGAFDVGKANVRADFMHNIERLGLAFAPWPGDLEVIGHTDSRPIRTSEFP 353
Query: 97 SSIALGLRRAYAVFNYFVA----------RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ AL RA V + ++ + G P AY +N
Sbjct: 354 DNQALSEARARNVADELRKTALPGGARAPENAVQRNIEYSGRGDAQPIDTAKTAAAYERN 413
Query: 147 RRAIV 151
RR V
Sbjct: 414 RRVDV 418
>gi|167897282|ref|ZP_02484684.1| hypothetical protein Bpse7_26327 [Burkholderia pseudomallei 7894]
Length = 481
Score = 51.7 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 35/125 (28%), Gaps = 14/125 (11%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RN 96
+ + FD ++R + + LG D + GH D
Sbjct: 292 PQGWLLVFKSDGAFDVGKANVRADFMHNIERLGLAFAPWPGDLEVIGHTDSRPIRTSEFP 351
Query: 97 SSIALGLRRAYAVFNYFVA----------RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ AL RA V + ++ + G P AY +N
Sbjct: 352 DNQALSEARARNVADELRKTALPGGARAPENAVQRNIEYSGRGDAQPIDTAKTAAAYERN 411
Query: 147 RRAIV 151
RR V
Sbjct: 412 RRVDV 416
>gi|167848689|ref|ZP_02474197.1| hypothetical protein BpseB_25726 [Burkholderia pseudomallei B7210]
Length = 486
Score = 51.7 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 35/125 (28%), Gaps = 14/125 (11%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RN 96
+ + FD ++R + + LG D + GH D
Sbjct: 297 PQGWLLVFKSDGAFDVGKANVRADFMHNIERLGLAFAPWPGDLEVIGHTDSRPIRTSEFP 356
Query: 97 SSIALGLRRAYAVFNYFVA----------RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ AL RA V + ++ + G P AY +N
Sbjct: 357 DNQALSEARARNVADELRKTALPGGARAPENAVQRNIEYSGRGDAQPIDTAKTAAAYERN 416
Query: 147 RRAIV 151
RR V
Sbjct: 417 RRVDV 421
>gi|167827195|ref|ZP_02458666.1| hypothetical protein Bpseu9_26190 [Burkholderia pseudomallei 9]
Length = 489
Score = 51.7 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 35/125 (28%), Gaps = 14/125 (11%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RN 96
+ + FD ++R + + LG D + GH D
Sbjct: 300 PQGWLLVFKSDGAFDVGKANVRADFMHNIERLGLAFAPWPGDLEVIGHTDSRPIRTSEFP 359
Query: 97 SSIALGLRRAYAVFNYFVA----------RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ AL RA V + ++ + G P AY +N
Sbjct: 360 DNQALSEARARNVADELRKTALPGGARAPENAVQRNIEYSGRGDAQPIDTAKTAAAYERN 419
Query: 147 RRAIV 151
RR V
Sbjct: 420 RRVDV 424
>gi|167818821|ref|ZP_02450501.1| hypothetical protein Bpse9_27048 [Burkholderia pseudomallei 91]
Length = 490
Score = 51.7 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 35/125 (28%), Gaps = 14/125 (11%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RN 96
+ + FD ++R + + LG D + GH D
Sbjct: 301 PQGWLLVFKSDGAFDVGKANVRADFMHNIERLGLAFAPWPGDLEVIGHTDSRPIRTSEFP 360
Query: 97 SSIALGLRRAYAVFNYFVA----------RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ AL RA V + ++ + G P AY +N
Sbjct: 361 DNQALSEARARNVADELRKTALPGGARAPENAVQRNIEYSGRGDAQPIDTAKTAAAYERN 420
Query: 147 RRAIV 151
RR V
Sbjct: 421 RRVDV 425
>gi|167741629|ref|ZP_02414403.1| hypothetical protein Bpse14_26418 [Burkholderia pseudomallei 14]
Length = 472
Score = 51.7 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 35/125 (28%), Gaps = 14/125 (11%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RN 96
+ + FD ++R + + LG D + GH D
Sbjct: 283 PQGWLLVFKSDGAFDVGKANVRADFMHNIERLGLAFAPWPGDLEVIGHTDSRPIRTSEFP 342
Query: 97 SSIALGLRRAYAVFNYFVA----------RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ AL RA V + ++ + G P AY +N
Sbjct: 343 DNQALSEARARNVADELRKTALPGGARAPENAVQRNIEYSGRGDAQPIDTAKTAAAYERN 402
Query: 147 RRAIV 151
RR V
Sbjct: 403 RRVDV 407
>gi|167722659|ref|ZP_02405895.1| hypothetical protein BpseD_26829 [Burkholderia pseudomallei DM98]
Length = 480
Score = 51.7 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 35/125 (28%), Gaps = 14/125 (11%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RN 96
+ + FD ++R + + LG D + GH D
Sbjct: 291 PQGWLLVFKSDGAFDVGKANVRADFMHNIERLGLAFAPWPGDLEVIGHTDSRPIRTSEFP 350
Query: 97 SSIALGLRRAYAVFNYFVA----------RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ AL RA V + ++ + G P AY +N
Sbjct: 351 DNQALSEARARNVADELRKTALPGGARAPENAVQRNIEYSGRGDAQPIDTAKTAAAYERN 410
Query: 147 RRAIV 151
RR V
Sbjct: 411 RRVDV 415
>gi|37704654|gb|AAR01599.1| OprF [Pseudomonas sp. MFY143]
Length = 297
Score = 51.7 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGL 103
V V FD ++ + + N+ +++++ + G+ D +G+ ++ L
Sbjct: 206 VVKVELDVKFDFDKAVVKSQYLPDIKNVAQFMQQYPATSTTVNGYTDSVGTDAYNLKLSQ 265
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
RRA +V V +G+SA R+ +GK P
Sbjct: 266 RRADSVRQALVQQGVSACRVDAVGHGKADPVA 297
>gi|126463592|ref|YP_001044706.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
17029]
gi|126105256|gb|ABN77934.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17029]
Length = 512
Score = 51.7 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 34/100 (34%), Gaps = 1/100 (1%)
Query: 56 TSSYSI-RPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
T S + L L + ++ G +D G +++ L RA V
Sbjct: 405 TDSLEPQSRESLSELIKLLEIGRFRGHELMLVGFSDGRGPAKTNLDLSRERAETVAAALR 464
Query: 115 ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
A V S+G+ +P NRR ++L+
Sbjct: 465 AAVPELGPPLVESFGEALPLACDTTVAGRRMNRRVELWLR 504
>gi|124262903|ref|YP_001023373.1| outer membrane protein [Methylibium petroleiphilum PM1]
gi|124262149|gb|ABM97138.1| outer membrane protein [Methylibium petroleiphilum PM1]
Length = 217
Score = 51.7 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 47/130 (36%), Gaps = 7/130 (5%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGH 88
S D L+ + + +V+F + + GH
Sbjct: 94 SGQDGGLDGADSSLATPRAPDATVYFPFDGATALDLSPAT---ALIPRVTQGLGLRLTGH 150
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
AD GS ++ L RRA AV F+ GISA R+++ G+ AKNRR
Sbjct: 151 ADSQGSDLYNLRLSERRARAVSKVFLGAGISADRLEIEGRGERDLIDLADG----AKNRR 206
Query: 149 AIVFLKGCRA 158
+ L G A
Sbjct: 207 VEIRLVGGEA 216
>gi|193885364|pdb|3CYP|B Chain B, The Crystal Structure Of The C-Terminal Domain Of
Helicobacter Pylori Motb (Residues 125-256).
gi|193885365|pdb|3CYP|C Chain C, The Crystal Structure Of The C-Terminal Domain Of
Helicobacter Pylori Motb (Residues 125-256).
gi|193885366|pdb|3CYP|D Chain D, The Crystal Structure Of The C-Terminal Domain Of
Helicobacter Pylori Motb (Residues 125-256).
gi|193885367|pdb|3CYP|E Chain E, The Crystal Structure Of The C-Terminal Domain Of
Helicobacter Pylori Motb (Residues 125-256).
gi|193885368|pdb|3CYQ|B Chain B, The Crystal Structure Of The Complex Of The C-Terminal
Domain Of Helicobacter Pylori Motb (Residues 125-256)
With N-Acetylmuramic Acid
gi|193885369|pdb|3CYQ|C Chain C, The Crystal Structure Of The Complex Of The C-Terminal
Domain Of Helicobacter Pylori Motb (Residues 125-256)
With N-Acetylmuramic Acid
gi|193885370|pdb|3CYQ|D Chain D, The Crystal Structure Of The Complex Of The C-Terminal
Domain Of Helicobacter Pylori Motb (Residues 125-256)
With N-Acetylmuramic Acid
gi|193885371|pdb|3CYQ|E Chain E, The Crystal Structure Of The Complex Of The C-Terminal
Domain Of Helicobacter Pylori Motb (Residues 125-256)
With N-Acetylmuramic Acid
gi|193885372|pdb|3CYQ|F Chain F, The Crystal Structure Of The Complex Of The C-Terminal
Domain Of Helicobacter Pylori Motb (Residues 125-256)
With N-Acetylmuramic Acid
gi|193885373|pdb|3CYQ|G Chain G, The Crystal Structure Of The Complex Of The C-Terminal
Domain Of Helicobacter Pylori Motb (Residues 125-256)
With N-Acetylmuramic Acid
gi|193885374|pdb|3CYQ|H Chain H, The Crystal Structure Of The Complex Of The C-Terminal
Domain Of Helicobacter Pylori Motb (Residues 125-256)
With N-Acetylmuramic Acid
gi|193885375|pdb|3CYQ|I Chain I, The Crystal Structure Of The Complex Of The C-Terminal
Domain Of Helicobacter Pylori Motb (Residues 125-256)
With N-Acetylmuramic Acid
gi|193885376|pdb|3CYQ|A Chain A, The Crystal Structure Of The Complex Of The C-Terminal
Domain Of Helicobacter Pylori Motb (Residues 125-256)
With N-Acetylmuramic Acid
gi|193885377|pdb|3CYQ|J Chain J, The Crystal Structure Of The Complex Of The C-Terminal
Domain Of Helicobacter Pylori Motb (Residues 125-256)
With N-Acetylmuramic Acid
gi|193885378|pdb|3CYQ|K Chain K, The Crystal Structure Of The Complex Of The C-Terminal
Domain Of Helicobacter Pylori Motb (Residues 125-256)
With N-Acetylmuramic Acid
gi|193885379|pdb|3CYQ|L Chain L, The Crystal Structure Of The Complex Of The C-Terminal
Domain Of Helicobacter Pylori Motb (Residues 125-256)
With N-Acetylmuramic Acid
gi|193885380|pdb|3CYQ|M Chain M, The Crystal Structure Of The Complex Of The C-Terminal
Domain Of Helicobacter Pylori Motb (Residues 125-256)
With N-Acetylmuramic Acid
gi|193885381|pdb|3CYQ|N Chain N, The Crystal Structure Of The Complex Of The C-Terminal
Domain Of Helicobacter Pylori Motb (Residues 125-256)
With N-Acetylmuramic Acid
gi|193885382|pdb|3CYQ|O Chain O, The Crystal Structure Of The Complex Of The C-Terminal
Domain Of Helicobacter Pylori Motb (Residues 125-256)
With N-Acetylmuramic Acid
gi|193885383|pdb|3CYQ|P Chain P, The Crystal Structure Of The Complex Of The C-Terminal
Domain Of Helicobacter Pylori Motb (Residues 125-256)
With N-Acetylmuramic Acid
gi|302148709|pdb|3IMP|B Chain B, New Crystal Form Of The C-Terminal Domain Of Helicobacter
Pylori Motb (Residues 125-256)
gi|302148710|pdb|3IMP|C Chain C, New Crystal Form Of The C-Terminal Domain Of Helicobacter
Pylori Motb (Residues 125-256)
gi|302148711|pdb|3IMP|D Chain D, New Crystal Form Of The C-Terminal Domain Of Helicobacter
Pylori Motb (Residues 125-256)
gi|302148712|pdb|3IMP|E Chain E, New Crystal Form Of The C-Terminal Domain Of Helicobacter
Pylori Motb (Residues 125-256)
gi|302148713|pdb|3IMP|A Chain A, New Crystal Form Of The C-Terminal Domain Of Helicobacter
Pylori Motb (Residues 125-256)
gi|302148714|pdb|3IMP|F Chain F, New Crystal Form Of The C-Terminal Domain Of Helicobacter
Pylori Motb (Residues 125-256)
gi|302148715|pdb|3IMP|G Chain G, New Crystal Form Of The C-Terminal Domain Of Helicobacter
Pylori Motb (Residues 125-256)
gi|302148716|pdb|3IMP|H Chain H, New Crystal Form Of The C-Terminal Domain Of Helicobacter
Pylori Motb (Residues 125-256)
gi|302148717|pdb|3IMP|I Chain I, New Crystal Form Of The C-Terminal Domain Of Helicobacter
Pylori Motb (Residues 125-256)
gi|302148718|pdb|3IMP|J Chain J, New Crystal Form Of The C-Terminal Domain Of Helicobacter
Pylori Motb (Residues 125-256)
gi|302148719|pdb|3IMP|K Chain K, New Crystal Form Of The C-Terminal Domain Of Helicobacter
Pylori Motb (Residues 125-256)
gi|302148720|pdb|3IMP|L Chain L, New Crystal Form Of The C-Terminal Domain Of Helicobacter
Pylori Motb (Residues 125-256)
Length = 138
Score = 51.7 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 37/103 (35%), Gaps = 6/103 (5%)
Query: 58 SYSIRPADIQVLSNLGSWLEKHDCDFLIE--GHADELG----SRNSSIALGLRRAYAVFN 111
S +I + + + ++K I G D+ S L RAY V
Sbjct: 12 SDAINQDMMLYIERIAKIIQKLPKRVHINVRGFTDDTPLVKTRFKSHYELAANRAYRVMK 71
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ G++ +++ +SYG P + KN R +F
Sbjct: 72 VLIQYGVNPNQLSFSSYGSTNPIAPNDSLENRMKNNRVEIFFS 114
>gi|313500679|gb|ADR62045.1| OmpA/MotB domain protein [Pseudomonas putida BIRD-1]
Length = 217
Score = 51.7 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 40/116 (34%), Gaps = 4/116 (3%)
Query: 41 QEQFSSSVGDSVF-FDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSI 99
Q+Q +S+ F P+ ++ + I G D +G+ ++
Sbjct: 95 QDQIQTSINHMTLNFAFGHSRFSPSAED--GDVLVRSAQDALQVKIVGFTDSVGTVEANR 152
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+ L RA A Y V RG+ A+++ + A NRR G
Sbjct: 153 RVALLRAQAAKMYLVRRGVPAAKISAEGQ-EGDYIAANDTPAGRAANRRVEFEFFG 207
>gi|238022763|ref|ZP_04603189.1| hypothetical protein GCWU000324_02674 [Kingella oralis ATCC 51147]
gi|237865966|gb|EEP67102.1| hypothetical protein GCWU000324_02674 [Kingella oralis ATCC 51147]
Length = 230
Score = 51.7 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL-GSWLEKH 79
++ D +P + E + S+ F Y++RP I L++L + +
Sbjct: 59 VECGDKAPDAPAPQVVTEQAHE--TISLQSEFLFGFDKYNLRPEAITTLNDLSAKLSQSN 116
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
+EG+ D +GS + AL RRA V NY V +G+ A R+ G+
Sbjct: 117 VQSVRVEGNTDFMGSDKYNQALSERRANTVANYLVQQGVPADRISAVGLGETQ 169
>gi|325954512|ref|YP_004238172.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
gi|323437130|gb|ADX67594.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
Length = 436
Score = 51.7 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 2/132 (1%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCD 82
+ + S+ TVL +S L EQ +S +V+FD + A + + + + +
Sbjct: 305 KNNQGSNTTTVLADSDLLEQLINSGIINVYFDYNVDQPYEASVGGIKFVSEYLKRNPNVQ 364
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
+ G+AD +GS + L RRA V V +G +A+ + V + G++ A
Sbjct: 365 MDVIGYADPVGSDGFNKNLSQRRAENVKRILVQQGANANNLNVVAMGEDKSF-QNSTVSA 423
Query: 143 YAKNRRAIVFLK 154
+ RR I +K
Sbjct: 424 HQLARRVIFKIK 435
>gi|330950600|gb|EGH50860.1| peptidoglycan-associated lipoprotein [Pseudomonas syringae Cit 7]
Length = 34
Score = 51.7 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 23/32 (71%)
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+++++ SYG+E P G+DE ++A+NRR +
Sbjct: 1 PAQLELVSYGEERPVATGNDEQSWAQNRRVEL 32
>gi|323493924|ref|ZP_08099041.1| Outer membrane protein [Vibrio brasiliensis LMG 20546]
gi|323311865|gb|EGA65012.1| Outer membrane protein [Vibrio brasiliensis LMG 20546]
Length = 188
Score = 51.7 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 1/101 (0%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYF 113
+ Y + P QVL + IEGHAD LGS + AL RRA V Y
Sbjct: 88 YGIDIYKLSPNHKQVLEQYLGLVNN-TAKIYIEGHADSLGSEGYNKALSARRANQVAKYL 146
Query: 114 VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ +R+ +YG+ P A NRR ++ +K
Sbjct: 147 KSDLKQGNRIVEHAYGESSPICNLTQNSATGCNRRVVITVK 187
>gi|315497902|ref|YP_004086706.1| ompa/motb domain protein [Asticcacaulis excentricus CB 48]
gi|315415914|gb|ADU12555.1| OmpA/MotB domain protein [Asticcacaulis excentricus CB 48]
Length = 407
Score = 51.7 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 1/104 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEK-HDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
V+F+ ++ ++ + + + ++ GHAD GS +I L RRA V
Sbjct: 302 IVYFEFDQSTLTADAQAIVQQAADYAKAGNATRVVVVGHADTSGSAAYNIRLSERRAKTV 361
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ G+S S + V G+ P+V D NRR+ + +
Sbjct: 362 ADALAGLGVSGSILAVDWKGESAPAVATGDGVKEPLNRRSTIDI 405
>gi|294787834|ref|ZP_06753078.1| OmpA family protein [Simonsiella muelleri ATCC 29453]
gi|294484127|gb|EFG31810.1| OmpA family protein [Simonsiella muelleri ATCC 29453]
Length = 229
Score = 51.7 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/154 (17%), Positives = 53/154 (34%), Gaps = 21/154 (13%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
+ +P+ + + ++ S + F ++R + L+ + L +
Sbjct: 59 TECGGKPAPAPEPTVETITENKEEVISFQSNFLFGFDKSTLRSEAVAKLNETAAKLRGTE 118
Query: 81 CD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE--MPSVYG 137
+EGH D +G + AL RRA V NY +G+ A ++ YG+ +
Sbjct: 119 VQSVRVEGHTDFMGKDTYNQALSERRANVVANYLANQGVPAGKISAVGYGESQARMTASC 178
Query: 138 HDEDAY------------------AKNRRAIVFL 153
E A +RR + +
Sbjct: 179 QAEVARMGKKVSAAKKRAALIACIEPDRRVDIRV 212
>gi|167565227|ref|ZP_02358143.1| hypothetical protein BoklE_21929 [Burkholderia oklahomensis EO147]
Length = 459
Score = 51.7 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 35/125 (28%), Gaps = 14/125 (11%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RN 96
+ + FD +RP + + LG D + GH D
Sbjct: 251 PQGWLLVFKSDGAFDVGKAKVRPDFMHNIERLGLAFAPWPGDLEVIGHTDSRPIRTSEFP 310
Query: 97 SSIALGLRRAYAVFNYFVA----------RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ AL RA V + ++ + G P AY +N
Sbjct: 311 DNQALSEARARTVADELRTTALPGGARAPENAVQRNIEYSGRGDAQPIDTAKTAAAYERN 370
Query: 147 RRAIV 151
RR V
Sbjct: 371 RRVDV 375
>gi|325279593|ref|YP_004252135.1| OmpA/MotB domain-containing protein [Odoribacter splanchnicus DSM
20712]
gi|324311402|gb|ADY31955.1| OmpA/MotB domain protein [Odoribacter splanchnicus DSM 20712]
Length = 377
Score = 51.7 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 59/131 (45%), Gaps = 6/131 (4%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDF 83
+ K+ + V + + S+ ++ F +S ++ ++ N+G++++ +
Sbjct: 249 EIKVIEKEVVRPVETKNVEIVESIPSTIPFKFNSAVVQDIYDPLIYNIGTFMKNNPDVKI 308
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDA 142
I G+AD+ G N ++ + RA AV N GI+++RM + GKE P +++
Sbjct: 309 RIVGYADKFGPINVNLRISQERAEAVANMLKKDYGINSNRMVIEYVGKEKPYYNNNNKWN 368
Query: 143 Y-AKNRRAIVF 152
A +
Sbjct: 369 RCAM---VEII 376
>gi|332883506|gb|EGK03789.1| hypothetical protein HMPREF9456_01856 [Dysgonomonas mossii DSM
22836]
Length = 660
Score = 51.7 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 48/134 (35%), Gaps = 28/134 (20%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRA 106
V +++F++ ++ P + L L L + + HAD GS + +I L RRA
Sbjct: 519 VLENIFYEFDKATLLPESKKELDGLIDLLNTNPNVTIELSAHADRKGSDDYNIKLSQRRA 578
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMP---------------------------SVYGHD 139
+V NY +A GIS R+ GK P
Sbjct: 579 ESVVNYLIAGGISKDRLTAVGKGKSEPKTVTKAIVKKYDFLKEGDILNEEFIEGLTSEQQ 638
Query: 140 EDAYAKNRRAIVFL 153
E A NRR +
Sbjct: 639 EMADQVNRRTEFKV 652
>gi|114327745|ref|YP_744902.1| hypothetical protein GbCGDNIH1_1081 [Granulibacter bethesdensis
CGDNIH1]
gi|114315919|gb|ABI61979.1| chemotaxis motB protein [Granulibacter bethesdensis CGDNIH1]
Length = 350
Score = 51.7 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 42/118 (35%), Gaps = 12/118 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLG--------SWLEKHDCDFLIEGHADELGS----R 95
V F + + + Q + ++ + + ++GHAD
Sbjct: 230 FQSDVLFPSGNADLTEQGRQQVKDIAAALIQLSKKFPPNVNWLLRVDGHADRQKMVNGKF 289
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L +RA V + +G+ + + ++ P G E AKNRR + L
Sbjct: 290 ASNWELSAQRAINVARLLIEQGVPGNHVSADAFADYQPVSQGDSEADLAKNRRIELRL 347
>gi|300024245|ref|YP_003756856.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888]
gi|299526066|gb|ADJ24535.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888]
Length = 602
Score = 51.7 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 55/126 (43%), Gaps = 8/126 (6%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-----FL 84
+ D + ++L+++ D + F+ S+ + P + + L + +++ F+
Sbjct: 431 TLDEIRATATLRDRMRRIDLDDINFEFGSWEVDPGEYRKLERVARAMKRVISRNPNEVFM 490
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAY 143
IEG+ D +GS+ +++L RRA +V + YG++ V + A
Sbjct: 491 IEGYTDAVGSQEDNLSLSDRRAESVAEVLTEEFQVPFENLVTQGYGEDYLKVP--TQAAE 548
Query: 144 AKNRRA 149
NRR
Sbjct: 549 RLNRRV 554
>gi|119952965|ref|YP_945174.1| outer membrane protein [Borrelia turicatae 91E135]
gi|119861736|gb|AAX17504.1| outer membrane protein [Borrelia turicatae 91E135]
Length = 385
Score = 51.7 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 50/115 (43%), Gaps = 3/115 (2%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSI 99
+ + + + F S+ I + L ++ + + D + LIEGH + G+
Sbjct: 269 KNENGIKLSLDIEFYPDSFQIIKKEYNKLKHIANLLEKFKDNNILIEGHTAKFGTEQEMQ 328
Query: 100 ALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L +RA+++ NY + + +++ +G + P A +KNRR + +
Sbjct: 329 ELSEKRAHSIGNYLLKMKVKNKNQIFFKGWGAKKPKYANSSPLA-SKNRRVEITI 382
>gi|126724638|ref|ZP_01740481.1| OmpA domain protein [Rhodobacterales bacterium HTCC2150]
gi|126705802|gb|EBA04892.1| OmpA domain protein [Rhodobacterales bacterium HTCC2150]
Length = 521
Score = 51.7 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 39/109 (35%), Gaps = 7/109 (6%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLE---KHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
F + S + L L +E + + GH+D G + ++ RR+ AV
Sbjct: 410 HFKSGSTDLDVQSSGNLERLAQIIEIGGMDGKELIFVGHSDGEGDAGINQSISNRRSNAV 469
Query: 110 FNYFVARGISAS----RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
SA ++ +G+ P E NRR V++K
Sbjct: 470 LRDIRRAAKSADLSRVKLSGVGFGEVFPIACDDSEWGKRINRRVEVWIK 518
>gi|56707951|ref|YP_169847.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110670422|ref|YP_666979.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
tularensis FSC198]
gi|118496967|ref|YP_898017.1| OmpA family peptidoglycan-associated lipoprotein [Francisella
tularensis subsp. novicida U112]
gi|194324196|ref|ZP_03057970.1| OmpA family protein [Francisella tularensis subsp. novicida FTE]
gi|224457032|ref|ZP_03665505.1| OmpA family peptidoglycan-associated lipoprotein [Francisella
tularensis subsp. tularensis MA00-2987]
gi|254370440|ref|ZP_04986445.1| hypothetical protein [Francisella tularensis subsp. tularensis
FSC033]
gi|254372337|ref|ZP_04987828.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
novicida GA99-3549]
gi|254874755|ref|ZP_05247465.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
tularensis MA00-2987]
gi|56604443|emb|CAG45475.1| Peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110320755|emb|CAL08858.1| Peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
tularensis FSC198]
gi|118422873|gb|ABK89263.1| peptidoglycan-associated lipoprotein, OmpA family [Francisella
novicida U112]
gi|151568683|gb|EDN34337.1| hypothetical protein FTBG_00207 [Francisella tularensis subsp.
tularensis FSC033]
gi|151570066|gb|EDN35720.1| peptidoglycan-associated lipoprotein [Francisella novicida
GA99-3549]
gi|194321643|gb|EDX19127.1| OmpA family protein [Francisella tularensis subsp. novicida FTE]
gi|254840754|gb|EET19190.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
tularensis MA00-2987]
Length = 207
Score = 51.7 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/195 (19%), Positives = 67/195 (34%), Gaps = 44/195 (22%)
Query: 1 MQYSTI-FIILSAITMMSISGIDNLDTKISSPDTVLNESSLQ------------------ 41
M+ I ++ ++ M++ D D S Q
Sbjct: 2 MKKRIINLAVIGSMLMLASCSSTRPDNSDLIKDKYAGVDSSQALEMSSQIYGSDKLSSDQ 61
Query: 42 -EQFSSSVGDS----VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
EQ + + V+F SY+I + L + + D + G+ D GS
Sbjct: 62 VEQMKKELMNINCRSVYFGFDSYNITDDAKECLDKTADYLIAHPDQPIKLSGNTDPRGSE 121
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG------------------ 137
+ LG +RA AV+NY + + ++ ++ V SYGK P+
Sbjct: 122 KYNFNLGQKRAEAVYNYLLGKNVNKDQICVVSYGKLKPAAEPTQFYDEFCKDGVNDACMY 181
Query: 138 -HDEDAYAKNRRAIV 151
E A+ +RR +
Sbjct: 182 KASEKAFYLDRRTEI 196
>gi|83717203|ref|YP_440080.1| hypothetical protein BTH_II1886 [Burkholderia thailandensis E264]
gi|83651028|gb|ABC35092.1| OmpA domain protein [Burkholderia thailandensis E264]
Length = 594
Score = 51.7 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 36/125 (28%), Gaps = 14/125 (11%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RN 96
+ + FD +RP + + LG D + GH D
Sbjct: 382 PQGWLLVFKSDGAFDVGKAKVRPDFMHNIERLGLAFAPWPGDLEVIGHTDSRPIRTSEFP 441
Query: 97 SSIALGLRRAYAVFNYFVA----------RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ AL RA V + A ++ + G P AY +N
Sbjct: 442 DNQALSEARARTVADELRATALPGGARAPENAVQRNIEYSGRGDAQPIDTAKTAAAYERN 501
Query: 147 RRAIV 151
RR V
Sbjct: 502 RRVDV 506
>gi|53725459|ref|YP_102587.1| ompA family protein [Burkholderia mallei ATCC 23344]
gi|52428882|gb|AAU49475.1| ompA family protein [Burkholderia mallei ATCC 23344]
Length = 223
Score = 51.7 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 39/103 (37%), Gaps = 7/103 (6%)
Query: 57 SSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA 115
+ S+ Q LS L ++H I G+ D LGS + L RA V +Y +A
Sbjct: 114 DAASMTEQGRQQLSQLAQRLTDRHAQTVSIVGYTDRLGSDAYNRQLSQARAKTVGDYLIA 173
Query: 116 RGISASRMKVTSYGKEMPSVYGHDED------AYAKNRRAIVF 152
G+ A + G P V + + NRR V
Sbjct: 174 AGVPADSVHAEGRGASDPLVQCDQRERAALIACLSPNRRVEVV 216
>gi|328676441|gb|AEB27311.1| 18K peptidoglycan-associated outer membrane lipoprotein;
Peptidoglycan-associated lipoprotein precursor; Outer
membrane protein P6; OmpA/MotB precursor [Francisella
cf. novicida Fx1]
Length = 207
Score = 51.7 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 39/190 (20%), Positives = 69/190 (36%), Gaps = 39/190 (20%)
Query: 1 MQYSTI--FIILSAITMMSISGIDNLDTKISSPDTVLN-------------ESSLQEQFS 45
M + I ++L++ + D + K + D+ S EQ
Sbjct: 7 MNLAVIGSMLMLASCSSTRPDNSDLIKDKYAGVDSSQALEMSSQIYGSDKLSSDQVEQMK 66
Query: 46 SSVGDS----VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIA 100
+ + V+F SY+I + L + + D + G+ D GS +
Sbjct: 67 KELMNINCRSVYFGFDSYNITDDAKECLDKTADYLIAHPDQPIKLSGNTDPRGSEKYNFN 126
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG-------------------HDED 141
LG +RA AV+NY + + ++ ++ V SYGK P+ E
Sbjct: 127 LGQKRAEAVYNYLLGKNVNKDQICVVSYGKLKPAAEPTQFYDEFCKDGVNDACMYKASEK 186
Query: 142 AYAKNRRAIV 151
AY +RR +
Sbjct: 187 AYYLDRRTEI 196
>gi|330827372|ref|YP_004390610.1| OmpA/MotB domain-containing protein [Alicycliphilus denitrificans
K601]
gi|329312680|gb|AEB87094.1| OmpA/MotB domain protein [Alicycliphilus denitrificans K601]
Length = 351
Score = 51.7 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 52/149 (34%), Gaps = 1/149 (0%)
Query: 5 TIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPA 64
T+ I A + + S D + + V ++ ++S +SS +
Sbjct: 193 TLAIRAEADAIPAGSAQLTDDVRPVTVVAVGPATAAPVAATASSSLRSLPFSSSVANLND 252
Query: 65 DIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+ + + L LI G D G+ + AL + RA V F G+ ++K
Sbjct: 253 EAKRNLSELLPLAMTAERVLIRGRTDSTGTVAGNRALAIARAATVRAAFARGGVDPRKLK 312
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
SY E + NRR V L
Sbjct: 313 -VSYCVTCFVASNDTEAGRSANRRVEVEL 340
>gi|258620771|ref|ZP_05715806.1| Outer membrane protein A [Vibrio mimicus VM573]
gi|258586969|gb|EEW11683.1| Outer membrane protein A [Vibrio mimicus VM573]
Length = 213
Score = 51.7 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIA 100
+ + +++ FDT S + Q L + +L D ++EGH D G++ +
Sbjct: 87 DYPMIKLKNTIKFDTGSAKVSVQSKQWLDRMAQFLASESGIDIVLEGHTDNTGAQKFNDT 146
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
L +RA +V V R ++ + + YG+ +P+
Sbjct: 147 LSEKRASSVKTALVQRQVAQNAIYTRGYGEHVPACTNKT 185
>gi|203287740|ref|YP_002222755.1| flagellar motor rotation protein B [Borrelia recurrentis A1]
gi|201084960|gb|ACH94534.1| flagellar motor rotation protein B [Borrelia recurrentis A1]
Length = 262
Score = 51.7 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/171 (16%), Positives = 58/171 (33%), Gaps = 20/171 (11%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISS-----PDTVLNESSLQEQFSSSVGDSVFFDTS 57
S F+ L + + + + I + + S+ FFD++
Sbjct: 78 LSNSFMSLPSTAKNKQASQASKNKSIIEFVEKIQSNKVIVRRHERGVVVSLLADAFFDSA 137
Query: 58 SYSIRPADI----QVLSNLGSWLEKHDCDFLIEGHADE-----LGSRNSSIALGLRRAYA 108
S ++ D Q +++ +L+ +F IEGH D G S+ L RA
Sbjct: 138 SAEVKLDDNRDVIQKIASFIGFLDNQGYNFKIEGHTDNVDVNINGIWKSNWELSSARAVN 197
Query: 109 VFNYFVARGISAS------RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ + + + +V+ + P + A NRR + +
Sbjct: 198 MLEQILNYTDHSKIESIESKFEVSGFAGSRPVATDDTPEGRAYNRRIDILI 248
>gi|121600552|ref|YP_992694.1| ompA family protein [Burkholderia mallei SAVP1]
gi|124384797|ref|YP_001026510.1| ompA family protein [Burkholderia mallei NCTC 10229]
gi|126450730|ref|YP_001080211.1| ompA family protein [Burkholderia mallei NCTC 10247]
gi|167002004|ref|ZP_02267794.1| OmpA family protein [Burkholderia mallei PRL-20]
gi|238562245|ref|ZP_00440713.2| OmpA family protein [Burkholderia mallei GB8 horse 4]
gi|254177630|ref|ZP_04884285.1| ompA family protein [Burkholderia mallei ATCC 10399]
gi|254199515|ref|ZP_04905881.1| OmpA family protein [Burkholderia mallei FMH]
gi|254205830|ref|ZP_04912182.1| OmpA family protein [Burkholderia mallei JHU]
gi|254358770|ref|ZP_04975043.1| OmpA family protein [Burkholderia mallei 2002721280]
gi|121229362|gb|ABM51880.1| ompA family protein [Burkholderia mallei SAVP1]
gi|124292817|gb|ABN02086.1| ompA family protein [Burkholderia mallei NCTC 10229]
gi|126243600|gb|ABO06693.1| ompA family protein [Burkholderia mallei NCTC 10247]
gi|147749111|gb|EDK56185.1| OmpA family protein [Burkholderia mallei FMH]
gi|147753273|gb|EDK60338.1| OmpA family protein [Burkholderia mallei JHU]
gi|148027897|gb|EDK85918.1| OmpA family protein [Burkholderia mallei 2002721280]
gi|160698669|gb|EDP88639.1| ompA family protein [Burkholderia mallei ATCC 10399]
gi|238522977|gb|EEP86418.1| OmpA family protein [Burkholderia mallei GB8 horse 4]
gi|243062249|gb|EES44435.1| OmpA family protein [Burkholderia mallei PRL-20]
Length = 236
Score = 51.7 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 39/103 (37%), Gaps = 7/103 (6%)
Query: 57 SSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA 115
+ S+ Q LS L ++H I G+ D LGS + L RA V +Y +A
Sbjct: 127 DAASMTEQGRQQLSQLAQRLTDRHAQTVSIVGYTDRLGSDAYNRQLSQARAKTVGDYLIA 186
Query: 116 RGISASRMKVTSYGKEMPSVYGHDED------AYAKNRRAIVF 152
G+ A + G P V + + NRR V
Sbjct: 187 AGVPADSVHAEGRGASDPLVQCDQRERAALIACLSPNRRVEVV 229
>gi|329943865|ref|ZP_08292136.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386]
gi|328531571|gb|EGF58407.1| OmpA family protein [Actinomyces sp. oral taxon 170 str. F0386]
Length = 183
Score = 51.7 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 48/125 (38%), Gaps = 8/125 (6%)
Query: 34 VLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADEL 92
+ SS + +S+ V FD S ++ QVL + + K + GH D +
Sbjct: 57 AVTYSSDGQTTVASLSGDVTFDVDSATLTDRAKQVLDEIVTRWNGKPPATVTVVGHTDSV 116
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH------DEDAYAKN 146
+ L RRA AV +Y ++ + ++ + G+ P +E A N
Sbjct: 117 ADDAYNQTLSERRAKAVADYLTSKVA-SLNVQSSGKGESEPVASETNEDGSVNEAGKAAN 175
Query: 147 RRAIV 151
R V
Sbjct: 176 RHVDV 180
>gi|189353747|ref|YP_001949374.1| putative OmpA family transmembrane protein [Burkholderia
multivorans ATCC 17616]
gi|189337769|dbj|BAG46838.1| putative OmpA family transmembrane protein [Burkholderia
multivorans ATCC 17616]
Length = 266
Score = 51.7 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 6/81 (7%)
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV---YG 137
+ GH D +GS S+ AL RA V Y VA G+ A+R++ G P G
Sbjct: 184 TRIDVVGHTDRIGSDESNRALSRARAETVKRYLVAHGLDAARIRTEGAGSSQPVSHCPPG 243
Query: 138 HDE---DAYAKNRRAIVFLKG 155
K+RR + + G
Sbjct: 244 ESPAVIACLQKDRRVTITVYG 264
>gi|90414986|ref|ZP_01222948.1| hypothetical protein P3TCK_23895 [Photobacterium profundum 3TCK]
gi|90323925|gb|EAS40525.1| hypothetical protein P3TCK_23895 [Photobacterium profundum 3TCK]
Length = 260
Score = 51.7 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHAD 90
D +E L+E+ + F + + P Q L + L++ + GH D
Sbjct: 113 DHSYSEVELKEKLLVFMALDNQFALNRAELLPDYQQALRYAATILKRQSHWHLQLTGHTD 172
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
LG+ +S+I LG++RA AV + + +G+ ++++ V S G+ M H NR+
Sbjct: 173 SLGTSDSNIQLGMKRASAVKRFLIEQGVKSNQIAVFSAGESMAMDDTHSRTQRLANRKVE 232
Query: 151 VFL 153
+
Sbjct: 233 AQV 235
>gi|325287615|ref|YP_004263405.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
gi|324323069|gb|ADY30534.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
Length = 366
Score = 51.7 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 47/109 (43%), Gaps = 7/109 (6%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSW--LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
+ ++T S ++ +++ + + I H D G+ S+ +L RRA +V
Sbjct: 255 INWNTGSSTLTAEAKRIIDSRLMPVLNQNPGVKLEIASHTDSRGNSVSNQSLSERRAKSV 314
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGH-----DEDAYAKNRRAIVFL 153
+Y +++G+++S + YG+ E +A NRR L
Sbjct: 315 ADYLISKGVNSSLLVANGYGENKLKNRCKDGVSCTEREHAANRRTEFRL 363
>gi|319954930|ref|YP_004166197.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
gi|319423590|gb|ADV50699.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
Length = 366
Score = 51.7 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 46/109 (42%), Gaps = 7/109 (6%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
+ +++ S ++ ++ N + + + H D G+ +S+ L RRA AV
Sbjct: 255 INWNSGSATLTSEAKSIIDNRLMPVLAQNPGVKVELASHTDSQGASSSNQDLSERRAKAV 314
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGH-----DEDAYAKNRRAIVFL 153
+Y +++G+++S + YG+ +A NRR L
Sbjct: 315 ADYLISKGVNSSLLVANGYGETKLLNRCKDGVSCTAREHAANRRTQFRL 363
>gi|153877197|ref|ZP_02004126.1| Outer membrane protein A [Beggiatoa sp. PS]
gi|152066338|gb|EDN65873.1| Outer membrane protein A [Beggiatoa sp. PS]
Length = 148
Score = 51.7 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 46/124 (37%), Gaps = 10/124 (8%)
Query: 36 NESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE---KHDCDFLIEGHADEL 92
+Q S + + + F+ ++ +L L + + H +I GHAD
Sbjct: 27 QAPIADKQKSKAEDNRITFEPGKATLTDQVKSILDTLAAKICLEIAHINAIVITGHADSS 86
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGI--SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
+ N L L RA AV +Y +R + ++ + P AKNRR
Sbjct: 87 PTDNYKQKLSLARAVAVADYLKSRCPALTDDKLITKGLADQYPLSADS-----AKNRRVE 141
Query: 151 VFLK 154
+ +
Sbjct: 142 IRVM 145
>gi|54302438|ref|YP_132431.1| OmpA family protein [Photobacterium profundum SS9]
gi|46915860|emb|CAG22631.1| hypothetical OmpA family protein [Photobacterium profundum SS9]
Length = 252
Score = 51.7 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 51/114 (44%), Gaps = 1/114 (0%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRNS 97
+E+ + + +V F T S I P Q L + + + + + G+AD G
Sbjct: 125 QSEERQALMLEVNVHFRTGSSDIEPLFQQQLDEIAELMKQSPEMSWQLAGYADRRGDSQK 184
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ L +RR AV +Y ++G+ ++ V +YG P + ++ +RR +
Sbjct: 185 NFDLSMRRVDAVRDYLESQGLDTDQLLVDAYGDLEPLKSEQNFESDFFDRRVTL 238
>gi|126661869|ref|ZP_01732868.1| possible outer membrane protein [Flavobacteria bacterium BAL38]
gi|126625248|gb|EAZ95937.1| possible outer membrane protein [Flavobacteria bacterium BAL38]
Length = 295
Score = 51.7 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 50/136 (36%), Gaps = 4/136 (2%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKH 79
+ + D I + + V ++++F S P + V+ L ++
Sbjct: 158 VPDADELIEPVELHQTPYDTAKVGDKLVMNNLYFYDRSGIFVPESLPVMEELLEFMIAHP 217
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYG 137
I+GH + L RA AV NY VA I R+ S+G P +
Sbjct: 218 KVKIEIQGHICCQL-GEDPEDIALIRAIAVHNYLVANDIDDKRLMYKSFGSTQPLHKIPE 276
Query: 138 HDEDAYAKNRRAIVFL 153
+E +NRR + +
Sbjct: 277 KNEKERNENRRVEILI 292
Score = 47.9 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 41/112 (36%), Gaps = 10/112 (8%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLR 104
S+ +S +FD P + L +++ +I G+ D G+ + + L +
Sbjct: 13 SAQEKESFYFDFDQDKFNPKQNE-LFLTWLNKDENREILIINGYCDWYGTFDYNDTLAYK 71
Query: 105 RAYAVFNYFVAR----GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
R + N + + ++ + YG+ + NRR VF
Sbjct: 72 RINTIQNELQTKENATIFFSDKIIIKGYGERV-----QTRKERRFNRRVDVF 118
>gi|93005425|ref|YP_579862.1| OmpA/MotB [Psychrobacter cryohalolentis K5]
gi|92393103|gb|ABE74378.1| OmpA/MotB [Psychrobacter cryohalolentis K5]
Length = 194
Score = 51.7 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/191 (16%), Positives = 61/191 (31%), Gaps = 37/191 (19%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV-------- 52
M ++L + +S + + S + + + V + +
Sbjct: 3 MLLRNTLVVLVSALTLSACQTADFSKQTSQTINMPTVAVNLDSDGDGVPNKLDQCPNTPE 62
Query: 53 --------------------------FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-I 85
++D +S I+ + L N G ++ H + I
Sbjct: 63 NVVVDDRGCPHSLLFGENEFMMEARAYYDENSSEIKSEYYEQLDNAGKKMQDHLDAVMHI 122
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
EGH + N++ L R + NY + I R+K YG E P E+++
Sbjct: 123 EGHISKREDNNANQTLSRYRVEEIKNYMTMTYNIDPDRIKTIYYGSERPIATNDAENSW- 181
Query: 145 KNRRAIVFLKG 155
N+R +
Sbjct: 182 LNQRIYALISN 192
>gi|228471058|ref|ZP_04055893.1| OmpA family protein [Porphyromonas uenonis 60-3]
gi|228307180|gb|EEK16217.1| OmpA family protein [Porphyromonas uenonis 60-3]
Length = 348
Score = 51.3 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 5/98 (5%)
Query: 57 SSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA 115
+ VL +L +E D IEGH E G + L RA ++ ++
Sbjct: 253 GKADLTDEAKFVLHDLAKLMEANPDLKLKIEGHTSEEGDEAFNQRLSEERAQVAVDFLIS 312
Query: 116 RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+GISA R++ G P + + NRR +
Sbjct: 313 QGISADRLQAEGKGSSEPIDPSNPDV----NRRTEFIV 346
>gi|109900220|ref|YP_663475.1| OmpA/MotB [Pseudoalteromonas atlantica T6c]
gi|109702501|gb|ABG42421.1| OmpA/MotB [Pseudoalteromonas atlantica T6c]
Length = 274
Score = 51.3 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 57/126 (45%), Gaps = 1/126 (0%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGH 88
+ E + + + + ++ F T S+++ + L + + + D + G+
Sbjct: 135 GTEQQSTEQTTESHSITPIETNIQFRTGSHAVESHYHRQLDLIAALVRQSPDLQITLAGY 194
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
ADE GS + + AL +RA +V Y + + +++ S+G+ S + +++ R+
Sbjct: 195 ADERGSSHYNQALSQQRAISVKRYLTKQHVPGAQLHTESFGESAVSSDKSEPESWFFARK 254
Query: 149 AIVFLK 154
+ ++
Sbjct: 255 VTLSIQ 260
>gi|260590691|ref|ZP_05856149.1| lipoprotein PG3 [Prevotella veroralis F0319]
gi|260537352|gb|EEX19969.1| lipoprotein PG3 [Prevotella veroralis F0319]
Length = 256
Score = 51.3 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 58/134 (43%), Gaps = 5/134 (3%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ ++ + +++ E + + F + + A L+ L ++++
Sbjct: 111 EAAQQLPNASVDKVTDANGLECVKVTFDSGILFPLNGSDLNAAAKNDLTKLAGLMKRNSN 170
Query: 82 -DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHD 139
D I+G+ D G+ +I L RRA +V +Y +G+++ ++ V +G + P
Sbjct: 171 CDVAIQGYTDASGNDKINIPLSQRRASSVSSYLQNQGVTSRQIRSVEGFGSQNPI-ENKT 229
Query: 140 EDAYAKNRRAIVFL 153
KNRR V+L
Sbjct: 230 VS--QKNRRVEVYL 241
>gi|257092706|ref|YP_003166347.1| OmpA/MotB domain-containing protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257045230|gb|ACV34418.1| OmpA/MotB domain protein [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 225
Score = 51.3 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 50/122 (40%), Gaps = 10/122 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLR 104
+V FD + ++RPA L + + + +I GH D +GS + L R
Sbjct: 104 ITVAADALFDFNKATLRPAGKAKLDEVVAKAGAIKLEVIIAVGHTDRIGSDAYNQKLSER 163
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD---------EDAYAKNRRAIVFLKG 155
RA AV Y V++GI A+R+ GK+ P +RR + L G
Sbjct: 164 RAAAVKQYLVSKGIDANRVYTEGKGKKNPVTKPDQCLGKTSPKVIACLQPDRRVDIELIG 223
Query: 156 CR 157
+
Sbjct: 224 TK 225
>gi|187931257|ref|YP_001891241.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
mediasiatica FSC147]
gi|187712166|gb|ACD30463.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 207
Score = 51.3 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 39/190 (20%), Positives = 69/190 (36%), Gaps = 39/190 (20%)
Query: 1 MQYSTI--FIILSAITMMSISGIDNLDTKISSPDTVLN-------------ESSLQEQFS 45
M S I ++L++ + D + K + D+ S EQ
Sbjct: 7 MNLSVIGSMLMLASCSSTRPDNSDLIKDKYAGVDSSQALEMSSQIYGSDKLSSDQVEQMK 66
Query: 46 SSVGDS----VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIA 100
+ + V+F SY+I + L + + D + G+ D GS +
Sbjct: 67 KELMNINCRSVYFGFDSYNITDDAKECLDKTADYLIAHPDQPIKLSGNTDPRGSEKYNFN 126
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG-------------------HDED 141
LG +RA AV+NY + + ++ ++ V SYGK P+ E
Sbjct: 127 LGQKRAEAVYNYLLGKNVNKDQICVVSYGKLKPAAEPTQFYDEFCKDGVNDACMYKASEK 186
Query: 142 AYAKNRRAIV 151
A+ +RR +
Sbjct: 187 AFYLDRRTEI 196
>gi|220921336|ref|YP_002496637.1| OmpA/MotB domain-containing protein [Methylobacterium nodulans ORS
2060]
gi|219945942|gb|ACL56334.1| OmpA/MotB domain protein [Methylobacterium nodulans ORS 2060]
Length = 178
Score = 51.3 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 45/105 (42%), Gaps = 6/105 (5%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGLRRAYA 108
V F+ +S ++ PA Q L L+ F++EGH D G ++ L RRA A
Sbjct: 74 VNFEYNSDALTPAAKQNLDEFAKALQDARLRSASFVVEGHTDARGGEEFNLGLSTRRADA 133
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V Y RG+ ++ +GK P D A NRR L
Sbjct: 134 VVKYLSGRGVPQGQLTARGFGKSRPL--TDDPLDPA-NRRVETRL 175
>gi|323143404|ref|ZP_08078089.1| putative outer membrane protein A [Succinatimonas hippei YIT 12066]
gi|322416809|gb|EFY07458.1| putative outer membrane protein A [Succinatimonas hippei YIT 12066]
Length = 329
Score = 51.3 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 50/120 (41%), Gaps = 10/120 (8%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
++ S F S+ ++ ++++ + + + ++G+ D +GS + L
Sbjct: 205 TLDASTLFPFDGSSLCEEGVKAVNDVVDSVNAKNIQNAAYDVKGYTDRIGSEAYNQTLSE 264
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVY-------GHDEDAYAKNRRAIVFLKGC 156
+RA AV + A G++ ++ VT G+ P D A +RR + + G
Sbjct: 265 KRAQAVADQLQAAGVAPEQLTVTGMGEADPVSTGCEGLRGNKLVDCLAPDRRVELSVTGE 324
>gi|119502996|ref|ZP_01625081.1| conserved hypothetical OmpA family protein [marine gamma
proteobacterium HTCC2080]
gi|119461342|gb|EAW42432.1| conserved hypothetical OmpA family protein [marine gamma
proteobacterium HTCC2080]
Length = 297
Score = 51.3 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 2/129 (1%)
Query: 25 DTKISSPDTVLNESSLQEQFS-SSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCD 82
D + + V E + + + + F T+ + LS L S+ +
Sbjct: 150 DKVNADLEIVQEEQQRFAKLALEQLQLEMLFKTNDSRLTAGGEDRLSLLASFLTRNENLS 209
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
IEG+AD G S++AL L RA V + G++A+RM V+++G+ D DA
Sbjct: 210 VRIEGYADPRGDSASNMALSLARAERVAQQLIDSGVAANRMTVSAHGESQALAGDGDIDA 269
Query: 143 YAKNRRAIV 151
YA +RR +
Sbjct: 270 YALDRRVHI 278
>gi|114776804|ref|ZP_01451847.1| hypothetical protein SPV1_11331 [Mariprofundus ferrooxydans PV-1]
gi|114552890|gb|EAU55321.1| hypothetical protein SPV1_11331 [Mariprofundus ferrooxydans PV-1]
Length = 219
Score = 51.3 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 18/117 (15%), Positives = 34/117 (29%), Gaps = 14/117 (11%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAY--- 107
+ F + S+ P +VL+ + H +E + +
Sbjct: 95 RISFKSGQTSVEPKTRKVLTAIAGKFLAHPGKMHLEIRGYSDDEPIGGYKHSHKPRHNLK 154
Query: 108 -----------AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
AV + GI + + T G + + +KNRR + L
Sbjct: 155 SLQALTQARADAVAAVMIDAGIPQTLVHATGMGATGFISDNNTAEGRSKNRRVDIHL 211
>gi|203284201|ref|YP_002221941.1| flagellar motor rotation protein B [Borrelia duttonii Ly]
gi|201083644|gb|ACH93235.1| flagellar motor rotation protein B [Borrelia duttonii Ly]
Length = 262
Score = 51.3 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/171 (16%), Positives = 58/171 (33%), Gaps = 20/171 (11%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISS-----PDTVLNESSLQEQFSSSVGDSVFFDTS 57
S F+ L + + + + I + + S+ FFD++
Sbjct: 78 LSNSFMSLPSTAKNKQASQASKNKSIIEFVEKIQSNKVIVRRHERGVVVSLLADAFFDSA 137
Query: 58 SYSIRPADI----QVLSNLGSWLEKHDCDFLIEGHADE-----LGSRNSSIALGLRRAYA 108
S ++ D Q +++ +L+ +F IEGH D G S+ L RA
Sbjct: 138 SAEVKLDDNRDVIQKIASFIGFLDNQGYNFKIEGHTDNVDVNINGIWKSNWELSSARAVN 197
Query: 109 VFNYFVARGISAS------RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ + + + +V+ + P + A NRR + +
Sbjct: 198 MLEQILNYTDHSKIESIESKFEVSGFAGSRPVATDDTPEGRAYNRRIDILI 248
>gi|54307571|ref|YP_128591.1| hypothetical protein PBPRA0350 [Photobacterium profundum SS9]
gi|46911994|emb|CAG18789.1| hypothetical protein PBPRA0350 [Photobacterium profundum SS9]
Length = 253
Score = 51.3 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 56/123 (45%), Gaps = 1/123 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHAD 90
D +E L+E+ + F + + P Q L + L++ + GH D
Sbjct: 106 DHSYSEVELKEKLLVFMALDNQFALNRAELLPDYQQALRYAATILKRQSHWHLQLTGHTD 165
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
LG+ +++I LG++RA AV + + +G+ ++++ + S G+ M H NR+
Sbjct: 166 SLGTSDNNIQLGMKRASAVKRFLIEQGVKSNQIAIFSAGESMSMDDTHSRTQRLANRKVE 225
Query: 151 VFL 153
+
Sbjct: 226 AQV 228
>gi|42527170|ref|NP_972268.1| OmpA family protein [Treponema denticola ATCC 35405]
gi|41817594|gb|AAS12179.1| OmpA family protein [Treponema denticola ATCC 35405]
Length = 167
Score = 51.3 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 62/149 (41%), Gaps = 11/149 (7%)
Query: 14 TMMSI-SGIDNLDTKISSPDTVLNESSLQEQFSSSVGD--------SVFFDTSSYSIRPA 64
M S S + K + P+ + ++E+ + +V+F SY I
Sbjct: 15 FMFSCKSAPKQKEEKPAEPEKTQEQEVVKEETDKKANEKNMSDDYYTVYFAPQSYQIDQF 74
Query: 65 DIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASR 122
Q+L +G L+ + +I GH+ +L S+ + L+RA AV +YF + A+
Sbjct: 75 TAQILKEIGEDLKAKNVKKIVIYGHSAKLDSQKDEDRIALQRAIAVASYFQKMKLFDANN 134
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ V G P+ + KNRR +
Sbjct: 135 IIVEGKGASEPARSHSEITDRFKNRRVEI 163
>gi|260426228|ref|ZP_05780207.1| OmpA family protein [Citreicella sp. SE45]
gi|260420720|gb|EEX13971.1| OmpA family protein [Citreicella sp. SE45]
Length = 219
Score = 51.3 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 36/154 (23%), Positives = 64/154 (41%), Gaps = 21/154 (13%)
Query: 2 QYSTIFIILSAITMMSISGI-------------------DNLDTKISSPDTVLNESSLQE 42
+YS I I ++ + ++ ++G ++ + L +
Sbjct: 4 RYSMIRIGIAGLALLLVTGCGAEFYREAGATTDRGDFGNATMNNTMLMNGDRSYVLDLGQ 63
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIAL 101
+F+ V V F +S + + L W+ + F + GH D +GS + + L
Sbjct: 64 RFAEDVPSMVNFAFNSSQLDAGARETLRVQAGWIRQFPEVRFRVYGHTDLVGSASYNRQL 123
Query: 102 GLRRAYAVFNYFVARGISASRMKVT-SYGKEMPS 134
GL RA AV Y ++GIS SR++ SYG+ P
Sbjct: 124 GLARAQAVVAYLASQGISRSRLEAVVSYGETQPL 157
>gi|221209346|ref|ZP_03582327.1| OmpA family protein [Burkholderia multivorans CGD1]
gi|221170034|gb|EEE02500.1| OmpA family protein [Burkholderia multivorans CGD1]
Length = 277
Score = 51.3 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 6/81 (7%)
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV---YG 137
+ GH D +GS S+ AL RA V Y VA G+ A+R++ G P G
Sbjct: 195 TRIEVVGHTDRIGSDESNRALSRARAETVKRYLVAHGLDAARIRTEGAGSSQPVSHCPPG 254
Query: 138 HDE---DAYAKNRRAIVFLKG 155
K+RR + + G
Sbjct: 255 ESPAVIACLQKDRRVTITVYG 275
>gi|193213926|ref|YP_001995125.1| OmpA/MotB domain-containing protein [Chloroherpeton thalassium ATCC
35110]
gi|193087403|gb|ACF12678.1| OmpA/MotB domain protein [Chloroherpeton thalassium ATCC 35110]
Length = 702
Score = 51.3 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 41/107 (38%), Gaps = 3/107 (2%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRA 106
+ D VF+ + +I + + LG ++ + D LI+G+ G+ RA
Sbjct: 51 INDDVFYP-GTATINKSTQAAVDRLGLYVAARPDLKILIQGNWSNEGNTVREKLYSEERA 109
Query: 107 YAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
A+ + I SR++ YG P A+NR +
Sbjct: 110 LAIQRFLIYTHNIDPSRIQTVGYGSARPLTVEKTAADKARNRAVTIV 156
>gi|146282539|ref|YP_001172692.1| OmpA family protein [Pseudomonas stutzeri A1501]
gi|145570744|gb|ABP79850.1| OmpA family protein [Pseudomonas stutzeri A1501]
Length = 457
Score = 51.3 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 33/100 (33%), Gaps = 5/100 (5%)
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDC---DFLIEGHADELGSRNSSIALGLRRAYAVFNYF 113
S + + L + +L + + G D G + L RA V
Sbjct: 359 GSAQLDNKAQRDLERVVEYLRDNGKLTDSAALVGFGDATGDPARAALLSKLRAMTVRREL 418
Query: 114 VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RG+ ++ G E+P KNRR V++
Sbjct: 419 NKRGVFLK--EINGMGSELPVASNDAGSGRVKNRRVEVWV 456
>gi|86130772|ref|ZP_01049371.1| OmpA family protein [Dokdonia donghaensis MED134]
gi|85818183|gb|EAQ39343.1| OmpA family protein [Dokdonia donghaensis MED134]
Length = 293
Score = 51.3 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 51/137 (37%), Gaps = 7/137 (5%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CD 82
D ++ +N S+ D + F + SY + +L + + + +
Sbjct: 142 RDVYGNNASQDINIDIDDTVVQISISDKMLFRSGSYRVSKEADDLLKRIAAVVNSEPAVE 201
Query: 83 FLIEGHADELG-----SRNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVY 136
++EGH D + L ++RA A+ +++ + +P V
Sbjct: 202 VMVEGHTDSRTVKKGSYLKDNWDLSVQRATAIVRELQNNHNVDPAKLIASGRSSYVPLVE 261
Query: 137 GHDEDAYAKNRRAIVFL 153
+ ++ ++NRR + +
Sbjct: 262 NNSKENMSRNRRTRILI 278
>gi|53721567|ref|YP_110552.1| hypothetical protein BPSS0531 [Burkholderia pseudomallei K96243]
gi|126442377|ref|YP_001061803.1| hypothetical protein BURPS668_A0804 [Burkholderia pseudomallei 668]
gi|126457957|ref|YP_001074752.1| hypothetical protein BURPS1106A_A0716 [Burkholderia pseudomallei
1106a]
gi|134283082|ref|ZP_01769784.1| ompA family protein [Burkholderia pseudomallei 305]
gi|167905639|ref|ZP_02492844.1| hypothetical protein BpseN_25596 [Burkholderia pseudomallei NCTC
13177]
gi|167921862|ref|ZP_02508953.1| hypothetical protein BpseBC_25138 [Burkholderia pseudomallei
BCC215]
gi|217424539|ref|ZP_03456037.1| type IV/VI secretion system protein, DotU/OmpA family protein
[Burkholderia pseudomallei 576]
gi|226196513|ref|ZP_03792094.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9]
gi|242312248|ref|ZP_04811265.1| OmpA family protein [Burkholderia pseudomallei 1106b]
gi|254185465|ref|ZP_04892053.1| ompA family protein [Burkholderia pseudomallei 1655]
gi|254296659|ref|ZP_04964113.1| ompA family protein [Burkholderia pseudomallei 406e]
gi|52211981|emb|CAH37988.1| OmpA-family membrane protein [Burkholderia pseudomallei K96243]
gi|126221868|gb|ABN85373.1| type IV/VI secretion system protein, DotU/OmpA family protein
[Burkholderia pseudomallei 668]
gi|126231725|gb|ABN95138.1| OmpA family protein [Burkholderia pseudomallei 1106a]
gi|134245730|gb|EBA45822.1| ompA family protein [Burkholderia pseudomallei 305]
gi|157806733|gb|EDO83903.1| ompA family protein [Burkholderia pseudomallei 406e]
gi|184209700|gb|EDU06743.1| ompA family protein [Burkholderia pseudomallei 1655]
gi|217392463|gb|EEC32487.1| type IV/VI secretion system protein, DotU/OmpA family protein
[Burkholderia pseudomallei 576]
gi|225931389|gb|EEH27395.1| OmpA family protein [Burkholderia pseudomallei Pakistan 9]
gi|242135487|gb|EES21890.1| OmpA family protein [Burkholderia pseudomallei 1106b]
Length = 552
Score = 51.3 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 35/125 (28%), Gaps = 14/125 (11%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RN 96
+ + FD ++R + + LG D + GH D
Sbjct: 363 PQGWLLVFKSDGAFDVGKANVRADFMHNIERLGLAFAPWPGDLEVIGHTDSRPIRTSEFP 422
Query: 97 SSIALGLRRAYAVFNYFVA----------RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ AL RA V + ++ + G P AY +N
Sbjct: 423 DNQALSEARARNVADELRKTALPGGARAPENAVQRNIEYSGRGDAQPIDTAKTAAAYERN 482
Query: 147 RRAIV 151
RR V
Sbjct: 483 RRVDV 487
>gi|327480795|gb|AEA84105.1| OmpA family protein [Pseudomonas stutzeri DSM 4166]
Length = 457
Score = 51.3 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 33/100 (33%), Gaps = 5/100 (5%)
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDC---DFLIEGHADELGSRNSSIALGLRRAYAVFNYF 113
S + + L + +L + + G D G + L RA V
Sbjct: 359 GSAQLDNKAQRDLERVVEYLRDNGKLTDSAALVGFGDATGDPARAALLSKLRAMTVRREL 418
Query: 114 VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RG+ ++ G E+P KNRR V++
Sbjct: 419 NKRGVFLK--EINGMGSELPVASNDAGSGRVKNRRVEVWV 456
>gi|219684554|ref|ZP_03539497.1| outer membrane protein [Borrelia garinii PBr]
gi|219671916|gb|EED28970.1| outer membrane protein [Borrelia garinii PBr]
Length = 389
Score = 51.3 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 44/111 (39%), Gaps = 3/111 (2%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGL 103
++ + F S+ I + + L + + + LIEGH ++ G L
Sbjct: 277 GINLSLDIEFYPDSFQILQKEYKKLDLIAKLLEKFEKNNILIEGHTEQFGLEEEMYELSE 336
Query: 104 RRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+RA + NY + + + ++ +G + P AKNRR + +
Sbjct: 337 KRARTIGNYLIKMKVKNKDQILFKGWGSKKPKYPNSSPL-KAKNRRVEITI 386
>gi|124383073|ref|YP_001024835.1| hypothetical protein BMA10229_1027 [Burkholderia mallei NCTC 10229]
gi|124291093|gb|ABN00363.1| OmpA domain protein [Burkholderia mallei NCTC 10229]
Length = 560
Score = 51.3 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 35/125 (28%), Gaps = 14/125 (11%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RN 96
+ + FD ++R + + LG D + GH D
Sbjct: 371 PQGWLLVFKSDGAFDVGKANVRADFMHNIERLGLAFAPWPGDLEVIGHTDSRPIRTSEFP 430
Query: 97 SSIALGLRRAYAVFNYFVA----------RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ AL RA V + ++ + G P AY +N
Sbjct: 431 DNQALSEARARNVADELRKTALPGGARAPENAVQRNIEYSGRGDAQPIDTAKTAAAYERN 490
Query: 147 RRAIV 151
RR V
Sbjct: 491 RRVDV 495
>gi|223041430|ref|ZP_03611633.1| lipoprotein Plp4 [Actinobacillus minor 202]
gi|223017688|gb|EEF16095.1| lipoprotein Plp4 [Actinobacillus minor 202]
Length = 294
Score = 51.3 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 7/119 (5%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRR 105
++ FD S+ ++ ++ L L+ ++EG+ D +G+ ++ L RR
Sbjct: 136 NINSDFLFDFDKDSLTAEGVRTVNALADKLKSLPVKSIVVEGYTDRMGTVEYNLDLSQRR 195
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAY---AKNRRAIVFLKGCRAN 159
A V G++ + YGK G+D+ A NRR +V +G N
Sbjct: 196 ANTVKAELQRLGVTTE-LNAVGYGKANQVKHCDGNDQAAKDCLRPNRRVVVKAQGVEMN 253
>gi|86130146|ref|ZP_01048746.1| OmpA family protein [Dokdonia donghaensis MED134]
gi|85818821|gb|EAQ39980.1| OmpA family protein [Dokdonia donghaensis MED134]
Length = 431
Score = 51.3 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 2/133 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHD 80
+S + + + ++ +V+F +S ++ ++ L ++ E
Sbjct: 299 AKKSDIPTSTPAIASGDDVIKKLIEDGYVNVYFQFNSTKPETYSLESINYLIKYMTENAG 358
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ G+ADE+G+ +++ L RRA V + VA GISASR+ T G++
Sbjct: 359 ASAQLVGYADEIGNASTNQRLSERRAQKVKDIMVAAGISASRLTATGNGEDASVDKNSAP 418
Query: 141 DAYAKNRRAIVFL 153
A RR L
Sbjct: 419 -ARQLVRRVTFKL 430
>gi|99082759|ref|YP_614913.1| OmpA/MotB [Ruegeria sp. TM1040]
gi|99039039|gb|ABF65651.1| OmpA/MotB [Ruegeria sp. TM1040]
Length = 517
Score = 51.3 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 37/105 (35%), Gaps = 7/105 (6%)
Query: 57 SSYSIRPADIQVLSNLGSWLE---KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYF 113
S + L LE + G +D G + A+ ++RA +V
Sbjct: 413 GSSRPDAQSRNNIDLLARELEAGVYDGKRLVFVGFSDGEGPAEGNRAIAMKRAESVRRAV 472
Query: 114 VARGISAS----RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+A+ ++ +YG+ +P NRR V+++
Sbjct: 473 ERAAETANLDRISIETAAYGEALPIACDDSAWGRQANRRVEVWIR 517
>gi|218675048|ref|ZP_03524717.1| OmpA family membrane protein [Rhizobium etli GR56]
Length = 500
Score = 51.3 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 8/108 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWL-----EKHDCDFLIEGHADELGSRNSSIALGLR 104
D++ F T S I + L + + + FLIEGH D +GS S++ L +
Sbjct: 381 DTITFATGSAEIPMTQARTLRKVADAINQVLEKDPSETFLIEGHTDAVGSDQSNLILSDQ 440
Query: 105 RAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA +V N GI+ + YG+ V D + +NRR +
Sbjct: 441 RAESVANVLTDVYGIAPENLATQGYGERYLKVNTSDPE--QENRRVTI 486
>gi|67639335|ref|ZP_00438203.1| OmpA domain protein [Burkholderia mallei GB8 horse 4]
gi|121597986|ref|YP_990337.1| hypothetical protein BMASAVP1_0732 [Burkholderia mallei SAVP1]
gi|126447196|ref|YP_001079177.1| hypothetical protein BMA10247_A2001 [Burkholderia mallei NCTC
10247]
gi|167003578|ref|ZP_02269364.1| OmpA family protein [Burkholderia mallei PRL-20]
gi|254177240|ref|ZP_04883896.1| OmpA domain protein [Burkholderia mallei ATCC 10399]
gi|254203187|ref|ZP_04909549.1| OmpA family protein [Burkholderia mallei FMH]
gi|254208522|ref|ZP_04914871.1| OmpA family protein [Burkholderia mallei JHU]
gi|121225784|gb|ABM49315.1| OmpA domain protein [Burkholderia mallei SAVP1]
gi|126240050|gb|ABO03162.1| OmpA domain protein [Burkholderia mallei NCTC 10247]
gi|147746232|gb|EDK53310.1| OmpA family protein [Burkholderia mallei FMH]
gi|147751209|gb|EDK58277.1| OmpA family protein [Burkholderia mallei JHU]
gi|160698280|gb|EDP88250.1| OmpA domain protein [Burkholderia mallei ATCC 10399]
gi|238519871|gb|EEP83337.1| OmpA domain protein [Burkholderia mallei GB8 horse 4]
gi|243060913|gb|EES43099.1| OmpA family protein [Burkholderia mallei PRL-20]
Length = 552
Score = 51.3 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 35/125 (28%), Gaps = 14/125 (11%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RN 96
+ + FD ++R + + LG D + GH D
Sbjct: 363 PQGWLLVFKSDGAFDVGKANVRADFMHNIERLGLAFAPWPGDLEVIGHTDSRPIRTSEFP 422
Query: 97 SSIALGLRRAYAVFNYFVA----------RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ AL RA V + ++ + G P AY +N
Sbjct: 423 DNQALSEARARNVADELRKTALPGGARAPENAVQRNIEYSGRGDAQPIDTAKTAAAYERN 482
Query: 147 RRAIV 151
RR V
Sbjct: 483 RRVDV 487
>gi|254355979|ref|ZP_04972256.1| OmpA family protein [Burkholderia mallei 2002721280]
gi|148024962|gb|EDK83131.1| OmpA family protein [Burkholderia mallei 2002721280]
Length = 560
Score = 51.3 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 35/125 (28%), Gaps = 14/125 (11%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RN 96
+ + FD ++R + + LG D + GH D
Sbjct: 371 PQGWLLVFKSDGAFDVGKANVRADFMHNIERLGLAFAPWPGDLEVIGHTDSRPIRTSEFP 430
Query: 97 SSIALGLRRAYAVFNYFVA----------RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ AL RA V + ++ + G P AY +N
Sbjct: 431 DNQALSEARARNVADELRKTALPGGARAPENAVQRNIEYSGRGDAQPIDTAKTAAAYERN 490
Query: 147 RRAIV 151
RR V
Sbjct: 491 RRVDV 495
>gi|288959770|ref|YP_003450110.1| outer membrane protein [Azospirillum sp. B510]
gi|288912078|dbj|BAI73566.1| outer membrane protein [Azospirillum sp. B510]
Length = 203
Score = 51.3 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
VFFD +I PA +V+ + + + L+ + GH D GS + L +RRA AV
Sbjct: 93 VFFDWDKSTITPAADRVIGDAVSAILKNGGAKIQVVGHTDTSGSPAYNQKLSVRRADAVK 152
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
VA+GI A+ + G+ V NRRA +
Sbjct: 153 KALVAKGIQAANITTEGKGESQLLVQTGPNVREPSNRRAQI 193
>gi|153000353|ref|YP_001366034.1| OmpA/MotB domain-containing protein [Shewanella baltica OS185]
gi|151364971|gb|ABS07971.1| OmpA/MotB domain protein [Shewanella baltica OS185]
Length = 276
Score = 51.3 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 63/148 (42%), Gaps = 3/148 (2%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQF--SSSVGDSVFFDTSSYSIRPADIQ 67
LS +++ + + + S Q Q ++G +V F T S + +
Sbjct: 117 LSELSVKQQAAEKRASEYAKAQQELDELLSAQRQLLSELALGLNVQFRTGSSEVESHFLP 176
Query: 68 VLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT 126
L ++ + + + ++G+AD G + + AL +R V Y + +G++A RM
Sbjct: 177 QLDDVAEVMNLSPELNLELKGYADRRGDVSYNQALSEQRLLEVRGYLIKQGVAAERMTTQ 236
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
++G P D ++ +RR + L+
Sbjct: 237 AFGALSPLQAEQDRESDVFDRRVTLTLQ 264
>gi|260768753|ref|ZP_05877687.1| Flagellar motor rotation protein MotB [Vibrio furnissii CIP 102972]
gi|260616783|gb|EEX41968.1| Flagellar motor rotation protein MotB [Vibrio furnissii CIP 102972]
Length = 324
Score = 51.3 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 52/136 (38%), Gaps = 9/136 (6%)
Query: 30 SPDTVLNESSLQEQFSSSVGDS---VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+N + + DS F+ S+ P +L NL + + ++
Sbjct: 131 DGAGSVNVQITPQGLKIIISDSDKGPMFNRGGSSMTPYYQDLLLNLAPVFSRVENAIIVT 190
Query: 87 GHADELG---SRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDA 142
GH D + ++ L RA + + + G+ +++ +V+ + P + + +
Sbjct: 191 GHTDASRFRGTSMTNWELSSNRANSARYFLNSGGVPRAQIFQVSGMAESAPLLPENPKSG 250
Query: 143 YAKNRRAIVFLKGCRA 158
+NRR +FL A
Sbjct: 251 --QNRRIEIFLLTSDA 264
>gi|126174068|ref|YP_001050217.1| OmpA/MotB domain-containing protein [Shewanella baltica OS155]
gi|125997273|gb|ABN61348.1| OmpA/MotB domain protein [Shewanella baltica OS155]
Length = 276
Score = 51.3 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 63/148 (42%), Gaps = 3/148 (2%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQF--SSSVGDSVFFDTSSYSIRPADIQ 67
LS +++ + + + S Q Q ++G +V F T S + +
Sbjct: 117 LSELSVKQQAAEKRASEYAKAQQDLDELLSAQRQLLSELALGLNVQFRTGSSEVESHFLP 176
Query: 68 VLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT 126
L ++ + + + ++G+AD G + + AL +R V Y + +G++A RM
Sbjct: 177 QLDDVAEVMNLSPELNLELKGYADRRGDVSYNQALSEQRLLEVRGYLIMQGVAAERMTTQ 236
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
++G P D ++ +RR + L+
Sbjct: 237 AFGALSPLQAEQDRESDVFDRRVTLTLQ 264
>gi|261867947|ref|YP_003255869.1| Plp4 [Aggregatibacter actinomycetemcomitans D11S-1]
gi|261413279|gb|ACX82650.1| Plp4 [Aggregatibacter actinomycetemcomitans D11S-1]
Length = 274
Score = 51.3 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 45/112 (40%), Gaps = 8/112 (7%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRR 105
S+ FD ++ +V+ + + L++ + G+ D LGS+ ++ L RR
Sbjct: 138 SLTADFLFDFDKDTLTVKGREVVDKVAAQLKESKAQEVKVAGYTDRLGSKVYNMDLSQRR 197
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD------EDAYAKNRRAIV 151
A V N + +GI ++ YG+ ++ NRR +
Sbjct: 198 ADRVKNRLIEQGID-VQINAVGYGEAHQVQACNNVKSSQLISCLRPNRRVEI 248
>gi|217973615|ref|YP_002358366.1| OmpA/MotB domain-containing protein [Shewanella baltica OS223]
gi|217498750|gb|ACK46943.1| OmpA/MotB domain protein [Shewanella baltica OS223]
Length = 276
Score = 51.3 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 63/148 (42%), Gaps = 3/148 (2%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQF--SSSVGDSVFFDTSSYSIRPADIQ 67
LS +++ + + + S Q Q ++G +V F T S + +
Sbjct: 117 LSELSVKQQAAEKRASEYAKAQQELDELLSAQRQLLSELALGLNVQFRTGSSEVESHFLP 176
Query: 68 VLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT 126
L ++ + + + ++G+AD G + + AL +R V Y + +G++A RM
Sbjct: 177 QLDDVAEVMNLSPELNLELKGYADRRGDVSYNQALSEQRLLEVRGYLIKQGVAAERMTTQ 236
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
++G P D ++ +RR + L+
Sbjct: 237 AFGALSPLQAEQDRESDVFDRRVTLTLQ 264
>gi|28275237|ref|NP_783492.1| outer membrane protein OmpA weak-like protein [Shewanella
oneidensis MR-1]
Length = 49
Score = 51.3 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 16/41 (39%)
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+GI ++R+ G+ P +NRR V +
Sbjct: 1 MQGQGIQSNRLISLGKGESDPVANNKSASGRQQNRRVEVII 41
>gi|89890715|ref|ZP_01202224.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
gi|89516860|gb|EAS19518.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
Length = 368
Score = 51.3 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/147 (21%), Positives = 55/147 (37%), Gaps = 7/147 (4%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-- 71
+++ + K+ S + S + + + T S ++ AD +
Sbjct: 219 SVVPSTQQTITREKLVSKGGLTVWSEVDCALVEENNLQINWATGSSTLTAADKAEIDAKL 278
Query: 72 LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
L + H D GS+ S+ AL RRA +V NY +++GI+ SR+ YG+
Sbjct: 279 LSVLNNTPGSKVEVASHTDSRGSKTSNQALSERRAQSVANYLISKGINNSRIVANGYGEN 338
Query: 132 MPSVYGH-----DEDAYAKNRRAIVFL 153
E + NRR L
Sbjct: 339 RLKNRCADGVSCTEREHKANRRTTFRL 365
>gi|226939541|ref|YP_002794614.1| RmpM [Laribacter hongkongensis HLHK9]
gi|226714467|gb|ACO73605.1| RmpM [Laribacter hongkongensis HLHK9]
Length = 210
Score = 51.3 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 19/123 (15%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
S+ V F ++ P Q L ++ + ++ + G+ D +G+ ++AL
Sbjct: 87 SLSAEVLFGFDKSTVTPEGKQALVDVANKIKSKGAKLQGVEVLGYTDYIGTEKYNMALSE 146
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK-------------NRRAI 150
RRA AV N V G +++ G+ ++ AK +RR
Sbjct: 147 RRAAAVKNVLVEMGADPAKITSAGRGE---LNDKTAQECRAKKQSYKQLKACLAPDRRVD 203
Query: 151 VFL 153
V +
Sbjct: 204 VEI 206
>gi|332291485|ref|YP_004430094.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332169571|gb|AEE18826.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 293
Score = 51.3 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 46/117 (39%), Gaps = 7/117 (5%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELG-----SRNS 97
S+ D + F + SY + +L + + + + ++EGH D
Sbjct: 162 VQISISDKMLFRSGSYRVSKEADALLRRIAAVVNSEPAVEVMVEGHTDSRTVKKGSYLKD 221
Query: 98 SIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L ++RA A+ + S++ + +P V ++ ++NRR + +
Sbjct: 222 NWDLSVQRATAIVRELQTKHNVDPSKLIASGRSSYVPLVENDSKENMSRNRRTRILI 278
>gi|251733459|emb|CAR82479.1| pal [Rhizobium undicola]
Length = 87
Score = 51.3 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 56 TSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
T S SIR Q L W +EGHADE G+R ++ALG RRA A +Y V
Sbjct: 1 TDSTSIRADAQQTLDRQAQWLQRYSQYPITVEGHADERGTREYNLALGARRAAATKDYLV 60
Query: 115 ARGISASRMKVTSYGKEMPSVYGHD 139
+RGI ASR+K SYGKE P D
Sbjct: 61 SRGIPASRIKTISYGKERPVATCDD 85
>gi|330752331|emb|CBL87285.1| protein with similarity to outer membrane OmpA family protein
[uncultured Flavobacteria bacterium]
Length = 266
Score = 51.3 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 45/121 (37%), Gaps = 3/121 (2%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL--GS 94
E L + + + +F + + + L + L+EGH + +
Sbjct: 146 ERELVKGDKIRLKNILFVGGEARFRAVSYKDLNQLLAVMNAYPNLKILVEGHVNSPGKRN 205
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD-EDAYAKNRRAIVFL 153
N++ L +RA AV Y + +GI SR+ +G E NRR + +
Sbjct: 206 TNTNQVLSTQRAEAVVKYLIKKGIRESRLSFIGFGNTKMIYPNTKLEYEMQFNRRVEILV 265
Query: 154 K 154
+
Sbjct: 266 Q 266
>gi|208780419|ref|ZP_03247760.1| OmpA family protein [Francisella novicida FTG]
gi|208743787|gb|EDZ90090.1| OmpA family protein [Francisella novicida FTG]
Length = 201
Score = 51.3 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 69/190 (36%), Gaps = 39/190 (20%)
Query: 1 MQYSTI--FIILSAITMMSISGIDNLDTKISSPDTVLN-------------ESSLQEQFS 45
M + I ++L++ + D + K + D+ S EQ
Sbjct: 1 MNLAVIGSMLMLASCSSTRPDNSDLIKDKYAGVDSSQALEMSSQIYGSDKLSSDQVEQMK 60
Query: 46 SSVGDS----VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIA 100
+ + V+F SY+I + L + + D + G+ D GS +
Sbjct: 61 KELMNINCRSVYFGFDSYNITDDAKECLDKTADYLIAHPDQPIKLSGNTDPRGSEKYNFN 120
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG-------------------HDED 141
LG +RA AV+NY + + ++ ++ V SYGK P+ E
Sbjct: 121 LGQKRAEAVYNYLLGKNVNKDQICVVSYGKLKPAAEPTQFYDEFCKDGVNDACMYKASEK 180
Query: 142 AYAKNRRAIV 151
A+ +RR +
Sbjct: 181 AFYLDRRTEI 190
>gi|119953079|ref|YP_945288.1| flagellar motor protein MotB [Borrelia turicatae 91E135]
gi|119861850|gb|AAX17618.1| chemotaxis MotB protein [Borrelia turicatae 91E135]
Length = 262
Score = 51.3 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 43/128 (33%), Gaps = 15/128 (11%)
Query: 41 QEQFSSSVGDSVFFDTSSYS----IRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRN 96
+ S+ FFD++S IQ +++ +L+ +F IEGH D +
Sbjct: 121 ERGVVVSLLADAFFDSASAEVKLDDNRETIQKIASFIGFLDNQGYNFKIEGHTDNVDVNI 180
Query: 97 SSIALGLRRAYAVFNYFV-----------ARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ I + + S+ +V+ + P + A
Sbjct: 181 NGIWKSNWELSSARAVNMLEQILNYTDQSKIQSIESKFEVSGFAGSRPVATDDTPEGRAY 240
Query: 146 NRRAIVFL 153
NRR + +
Sbjct: 241 NRRIDILI 248
>gi|87307403|ref|ZP_01089548.1| probable MotB-like protein [Blastopirellula marina DSM 3645]
gi|87290143|gb|EAQ82032.1| probable MotB-like protein [Blastopirellula marina DSM 3645]
Length = 257
Score = 51.3 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 50/140 (35%), Gaps = 5/140 (3%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
S + D + ++ S++VG ++F S + + L
Sbjct: 88 STQEGGDKVKAPVGDSPQVRIIRPGSSTAVGTVIYFPGESAKLTDEMKRDLQVQAQEFGG 147
Query: 79 HDCDFLIEGHADELG-----SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
I GHA LG R AV N+ V+ GI R+++++ GK P
Sbjct: 148 KPQKIEIRGHAAPKPLAPGAPFVDHYDLGYERCRAVMNFLVSLGIDPRRIRISTAGKNEP 207
Query: 134 SVYGHDEDAYAKNRRAIVFL 153
G D +N R VFL
Sbjct: 208 IHIGTDPLKSKQNPRVEVFL 227
>gi|224371704|ref|YP_002605868.1| OmpA3 [Desulfobacterium autotrophicum HRM2]
gi|223694421|gb|ACN17704.1| OmpA3 [Desulfobacterium autotrophicum HRM2]
Length = 196
Score = 51.3 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 46/111 (41%), Gaps = 1/111 (0%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGL 103
+ V +F+T S+ + ++ + + +++ + I GH D G+ + L L
Sbjct: 86 VAPVSFIFYFNTGDTSLTKESLDLIPEVLNSVKERAPSEISIIGHTDTKGASVYNNKLSL 145
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RA V + + + +G+ P V D + +NRR + ++
Sbjct: 146 ERANKVAKIITHIDANLKNIYIQFHGENDPLVITGDNVSEKRNRRVEIMVR 196
>gi|293390339|ref|ZP_06634673.1| lipoprotein PlpD [Aggregatibacter actinomycetemcomitans D7S-1]
gi|290950873|gb|EFE00992.1| lipoprotein PlpD [Aggregatibacter actinomycetemcomitans D7S-1]
Length = 274
Score = 51.3 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 45/112 (40%), Gaps = 8/112 (7%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRR 105
S+ FD ++ +V+ + + L++ + G+ D LGS+ ++ L RR
Sbjct: 138 SLTADFLFDFDKDTLTVKGREVVDKVAAQLKESKAQEVKVAGYTDRLGSKVYNMDLSQRR 197
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD------EDAYAKNRRAIV 151
A V N + +GI ++ YG+ ++ NRR +
Sbjct: 198 ADRVKNRLIEQGID-VQINTVGYGEAHQVQACNNVKSSQLISCLRPNRRVEI 248
>gi|88607299|ref|YP_504946.1| OmpA family protein [Anaplasma phagocytophilum HZ]
gi|88598362|gb|ABD43832.1| OmpA family protein [Anaplasma phagocytophilum HZ]
Length = 205
Score = 51.3 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 66/162 (40%), Gaps = 10/162 (6%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M + F L A+ ++ G D+ + L + V+FD Y
Sbjct: 1 MLRRSSFFCLLALLSVTSCGTLLPDSNVGVGRHDLGSHRSVAFAKKV--EKVYFDIGKYD 58
Query: 61 IRPADIQV-LSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
++ +V L + + ++ GHAD G+ S+ALG +RA AV + + S
Sbjct: 59 LKGPGKKVILELVEQLRQDDSMYLVVIGHADATGTEEYSLALGEKRANAVKQFIIGCDKS 118
Query: 120 -ASRMKVTSYGKEMP---SVYGHD---EDAYAKNRRAIVFLK 154
A R+ S GK P E A A+NRRA++ ++
Sbjct: 119 LAPRVTTQSRGKAEPEVLVYSTDAQEVEKANAQNRRAVIVVE 160
>gi|255008683|ref|ZP_05280809.1| OmpA family membrane protein [Bacteroides fragilis 3_1_12]
gi|313146419|ref|ZP_07808612.1| outer membrane protein [Bacteroides fragilis 3_1_12]
gi|313135186|gb|EFR52546.1| outer membrane protein [Bacteroides fragilis 3_1_12]
Length = 224
Score = 51.0 bits (120), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 52/121 (42%), Gaps = 6/121 (4%)
Query: 34 VLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADEL 92
+ +++ + + F +S ++ A Q L+ + L++ D I GH D++
Sbjct: 93 QVTDNNGLAAVKVTFPSGILFAFNSSALSAASKQSLAEFANILKEDPTVDVAIIGHTDKV 152
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIV 151
G+ ++ + RAYAV NY + G+ + K V G + +NRR +
Sbjct: 153 GTYEANQKVSSNRAYAVENYLQSCGVKPYQFKKVEGVGYSQ-YNEAETPE---QNRRVEI 208
Query: 152 F 152
F
Sbjct: 209 F 209
>gi|322641772|gb|EFY38406.1| peptidoglycan-associated outer membrane lipoprotein [Salmonella
enterica subsp. enterica serovar Montevideo str. 531954]
Length = 178
Score = 51.0 bits (120), Expect = 5e-05, Method: Composition-based stats.
Identities = 39/151 (25%), Positives = 61/151 (40%), Gaps = 21/151 (13%)
Query: 1 MQYSTIF----IILSAITMMSISGIDNLDTKISSPDT----------------VLNESSL 40
MQ + + I L + + + S N S E +
Sbjct: 1 MQLNKVLKGLMIALPVMAIAACSSNKNASNDGSEGGMLNGAGTGMDANGNGNMSSEEQAR 60
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSI 99
+ + V+FD Y IR +L ++L + +EGHADE G+ +I
Sbjct: 61 LQMQQLQQNNIVYFDLDKYDIRSDFAAMLDAHANFLRSNPSYKVTVEGHADERGTPEYNI 120
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
+LG RRA AV Y +G+SA ++ + SYGK
Sbjct: 121 SLGERRANAVKMYLQGKGVSADQISIVSYGK 151
>gi|163781628|ref|ZP_02176628.1| predicted inner membrane protein [Hydrogenivirga sp. 128-5-R1-1]
gi|159882848|gb|EDP76352.1| predicted inner membrane protein [Hydrogenivirga sp. 128-5-R1-1]
Length = 224
Score = 51.0 bits (120), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 46/121 (38%), Gaps = 7/121 (5%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FLIEGHADE-----L 92
+ + D VFF+ +Y + P + L + + L+K + +EGH
Sbjct: 97 TADFVKLRLFDKVFFEDGTYQLTPKAREALVEVANVLKKLPENSFIRVEGHVSSLVEVRG 156
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
L +RRA V + A+G+ +++ YG P +N R ++
Sbjct: 157 RVVRDKWELSVRRATEVVRFLQAQGVEPTKLSAAGYGDIKPLYTWRQPILMERNNRVEIY 216
Query: 153 L 153
+
Sbjct: 217 I 217
>gi|315180456|gb|ADT87370.1| chemotaxis LafU protein [Vibrio furnissii NCTC 11218]
Length = 324
Score = 51.0 bits (120), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 52/136 (38%), Gaps = 9/136 (6%)
Query: 30 SPDTVLNESSLQEQFSSSVGDS---VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+N + + DS F+ S+ P +L NL + + ++
Sbjct: 131 DGAGSVNVQITPQGLKIIISDSDKGPMFNRGGSSMTPYYQDLLLNLAPVFSRVENAIIVT 190
Query: 87 GHADELG---SRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDA 142
GH D + ++ L RA + + + G+ +++ +V+ + P + + +
Sbjct: 191 GHTDASRFRGTSMTNWELSSNRANSARYFLNSGGVPRAQIFQVSGMAESAPLLPENPKSG 250
Query: 143 YAKNRRAIVFLKGCRA 158
+NRR +FL A
Sbjct: 251 --QNRRIEIFLLTSDA 264
>gi|237752333|ref|ZP_04582813.1| OmpA/MotB [Helicobacter winghamensis ATCC BAA-430]
gi|229375822|gb|EEO25913.1| OmpA/MotB [Helicobacter winghamensis ATCC BAA-430]
Length = 276
Score = 51.0 bits (120), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 40/138 (28%), Gaps = 8/138 (5%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV-LSNLGSWLEKHD 80
D + +S E F + FD ++ AD + L L L+K
Sbjct: 98 DFKENVKTSLGPSNIIDEGSEGFILRFSGKLLFDEGEITLNDADEVLFLKRLALILQKMP 157
Query: 81 CDFL--IEGHADELGSRNSSIALGLRRAYA-----VFNYFVARGISASRMKVTSYGKEMP 133
+ G+ D + A V + G++ +M G
Sbjct: 158 STLHLDVIGYTDNRTISPTPKFKDDIGLSALRALGVERVLLENGVNPKKMTALGNGATNF 217
Query: 134 SVYGHDEDAYAKNRRAIV 151
+ ++ KNRR
Sbjct: 218 ILPNTTKENRQKNRRVEF 235
>gi|254491000|ref|ZP_05104181.1| OmpA family protein [Methylophaga thiooxidans DMS010]
gi|224463513|gb|EEF79781.1| OmpA family protein [Methylophaga thiooxydans DMS010]
Length = 171
Score = 51.0 bits (120), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 45/122 (36%), Gaps = 1/122 (0%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHA 89
P L E+ +FF + + ++ + +I GH
Sbjct: 47 PPMELPETPKLVTLPEPFSAKLFFLLDKTEFTAESRVESQEIYQKILDRSFGEVVITGHT 106
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D S + AL LRRA V + G+ A +++++ G+ V D+ +NRR
Sbjct: 107 DTSASSAYNEALSLRRAQKVRQQLIDFGVPADSVRISAEGEYRLLVSTPDDTVEVRNRRV 166
Query: 150 IV 151
+
Sbjct: 167 EI 168
>gi|315057756|gb|ADT72085.1| Flagellar motor rotation protein MotB [Campylobacter jejuni subsp.
jejuni S3]
Length = 247
Score = 51.0 bits (120), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 43/125 (34%), Gaps = 6/125 (4%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSI-RPADIQVLSNLGS--WLEKHDCDFLIEGHADELGSR 95
Q + ++ V F+ S I L + I G+ D S
Sbjct: 108 QSDNQVALNLPSKVEFERGSAQIVSADIQDYLKRIAELTTYLPPQAKIEIRGYTDNSDSI 167
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
S L +RA V YF+ G + + + SYG P + A N R ++ K
Sbjct: 168 IRSYELAYQRAENVLKYFIEGGANLKNISIKSYGLNNPI--NGNPQALENN-RVEIYFKV 224
Query: 156 CRANT 160
A+T
Sbjct: 225 DTADT 229
>gi|309783317|ref|ZP_07678027.1| OmpA family protein [Ralstonia sp. 5_7_47FAA]
gi|308917861|gb|EFP63548.1| OmpA family protein [Ralstonia sp. 5_7_47FAA]
Length = 351
Score = 51.0 bits (120), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 48/140 (34%), Gaps = 1/140 (0%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+ + S D + + V ++ ++S +SS + + + +
Sbjct: 202 AIPAGSAQLTDDVRPVTVVAVGPATAAPVAATASSSLRSLPFSSSVANLNDEAKRSLSEL 261
Query: 74 SWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
L LI G D G+ + AL + RA V F G+ ++K SY
Sbjct: 262 LPLAMTAERVLIRGRTDSTGTVAGNRALAIARAATVRAAFARGGVDPRKLK-VSYCVTCF 320
Query: 134 SVYGHDEDAYAKNRRAIVFL 153
E + NRR V L
Sbjct: 321 VASNDTEAGRSANRRVEVEL 340
>gi|34540795|ref|NP_905274.1| OmpA family protein [Porphyromonas gingivalis W83]
gi|5081701|gb|AAD39496.1|AF145800_1 immunogenic 75 kDa protein PG4 [Porphyromonas gingivalis]
gi|34397109|gb|AAQ66173.1| OmpA family protein [Porphyromonas gingivalis W83]
Length = 672
Score = 51.0 bits (120), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 49/132 (37%), Gaps = 28/132 (21%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
++F+D ++RP ++ L L + D + HAD G ++ L RRA +
Sbjct: 535 QNIFYDFDKATLRPESMKSLDELIRILTDNPDIRIELGSHADRKGPDAYNLGLSDRRAKS 594
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGH---------------DED------------ 141
V +Y +RGI+A R+ YGK +P E+
Sbjct: 595 VVDYLTSRGIAADRLTWKGYGKSVPKTVTAKIAERHDFLKEGDVLTEEFVAPLTEEQQSV 654
Query: 142 AYAKNRRAIVFL 153
NRR +
Sbjct: 655 CDQLNRRTEFRV 666
>gi|197124507|ref|YP_002136458.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K]
gi|196174356|gb|ACG75329.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K]
Length = 357
Score = 51.0 bits (120), Expect = 5e-05, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 21/70 (30%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
+E D + L A A G++ R+ YG E P +
Sbjct: 283 VRVEAFVDATPDAQADQRLSQAMADAAIGRLRELGVAERRLSGVGYGGERPLLPNFTVRG 342
Query: 143 YAKNRRAIVF 152
NRR +
Sbjct: 343 RTANRRLEIV 352
>gi|91777208|ref|YP_552416.1| OmpA/MotB family outer membrane protein [Burkholderia xenovorans
LB400]
gi|91689868|gb|ABE33066.1| outer membrane protein, OmpA/MotB family [Burkholderia xenovorans
LB400]
Length = 359
Score = 51.0 bits (120), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 52/149 (34%), Gaps = 12/149 (8%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDT---SSYSIRPADIQVLSNLGSWLE 77
+S S + Q ++ F ++ PA + L ++ + L
Sbjct: 212 CKQALQAPASMSAPEQGSVAKPQQKITLKADSLFRFNGGDEAAMLPAGKRQLDDVATGLN 271
Query: 78 KHDC--DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+ I G+AD LG ++ ++ L ++RA V Y A + + G P V
Sbjct: 272 NAPALHELKITGYADRLGDKSYNLGLSMQRARTVERYLRA-HGVSVPITAQGRGSANPLV 330
Query: 136 YGH-DE-----DAYAKNRRAIVFLKGCRA 158
+ A NRR + L R+
Sbjct: 331 DCRRTKRDALVKCLAPNRRVEIELVAARS 359
>gi|71280451|ref|YP_270642.1| ompA family protein [Colwellia psychrerythraea 34H]
gi|71146191|gb|AAZ26664.1| ompA family protein [Colwellia psychrerythraea 34H]
Length = 278
Score = 51.0 bits (120), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 52/116 (44%), Gaps = 1/116 (0%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNS 97
+ + ++ S+ F T S I P + ++ L + + G+ D +G ++
Sbjct: 143 DSGQLQADNLLMSLQFSTGSSDIAPHYQEQVAALAQILNSSPEMKIDLSGYTDSIGEQSL 202
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L R +V +A+G+ ++ ++G+E P V ++ + +RR ++ L
Sbjct: 203 NQTLSQARVESVRTLLMAQGVEEQQIATFAFGEESPVVANNESEVSFYDRRVVLKL 258
>gi|52425200|ref|YP_088337.1| SmpA protein [Mannheimia succiniciproducens MBEL55E]
gi|52307252|gb|AAU37752.1| SmpA protein [Mannheimia succiniciproducens MBEL55E]
Length = 272
Score = 51.0 bits (120), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 42/118 (35%), Gaps = 9/118 (7%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRR 105
S+ FD S+ +V+ ++ L+ + G D LGS ++ L RR
Sbjct: 135 SLSADFLFDFDKDSLTERGKKVVDSVAEQLKASKAKTVKVAGFTDRLGSEAYNLELSQRR 194
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD-EDAYAK------NRRAIVFLKGC 156
A V + +AR + A + YG + A NRR + G
Sbjct: 195 ANQVKEWLIARDVKAD-IDAIGYGSAQQIKPCTGLKAGKALRDCLRPNRRVEISSSGT 251
>gi|118591825|ref|ZP_01549220.1| possible OmpA family member [Stappia aggregata IAM 12614]
gi|118435468|gb|EAV42114.1| possible OmpA family member [Stappia aggregata IAM 12614]
Length = 628
Score = 51.0 bits (120), Expect = 5e-05, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 8/108 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGS-----WLEKHDCDFLIEGHADELGSRNSSIALGLR 104
D++ FDT S +R + + L ++ + LIEGH D +GS S++AL R
Sbjct: 512 DTITFDTGSAVVRQSQVPQLEDIARASQAVIEQDPTTVLLIEGHTDAVGSDVSNLALSDR 571
Query: 105 RAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA V G++ M V YG++ V + NRR +
Sbjct: 572 RAETVARILADVYGVAPENMVVQGYGEDYLKVDTQGAEER--NRRVTI 617
>gi|89052778|ref|YP_508229.1| OmpA/MotB [Jannaschia sp. CCS1]
gi|88862327|gb|ABD53204.1| phosphate ABC transporter substrate-binding protein, PhoT family
[Jannaschia sp. CCS1]
Length = 513
Score = 51.0 bits (120), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 35/95 (36%), Gaps = 3/95 (3%)
Query: 62 RPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI--- 118
A + L+ + G +D G + L LRRA V + +A G+
Sbjct: 418 SRASVGRLAAAIERGTFDGRQLIFAGFSDGDGPSTVNARLSLRRADVVRDAVMAAGVAAL 477
Query: 119 SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +G+ MP + A NRR V++
Sbjct: 478 DRVELVTVGFGEAMPMACDDTDWGRAVNRRVEVWV 512
>gi|37704616|gb|AAR01580.1| OprF [Pseudomonas sp. MFY63]
Length = 297
Score = 51.0 bits (120), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGL 103
V V FD ++P + NL +++++ ++EGH D +G + L
Sbjct: 205 VVRVELDVKFDFDKSVVKPNSYADIKNLADFMKQYPQTTTVVEGHTDSVGPDAYNQKLSE 264
Query: 104 RRAYAVFNYFVARG-ISASRMKVTSYGKEMPSV 135
RRA AV ++ + +SR++ YG+ P
Sbjct: 265 RRANAVKQVLTSQYGVESSRVQSVGYGESRPVA 297
>gi|104782093|ref|YP_608591.1| periplamic phosphate-binding protein [Pseudomonas entomophila L48]
gi|95111080|emb|CAK15800.1| putative periplamic phosphate-binding protein [Pseudomonas
entomophila L48]
Length = 435
Score = 51.0 bits (120), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/103 (21%), Positives = 37/103 (35%), Gaps = 5/103 (4%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKH---DCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
F S S+ ++ + +G +L ++ G D + + L RA AV
Sbjct: 334 FQEGSASLDNKALRDVQRVGDYLRHAGKLHEQAVLVGFGDPKETPGRAALLSRLRAMAVR 393
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G+ V G E+P E +NRR V++
Sbjct: 394 RELARAGVEVK--DVAGMGDELPVAGNDLEQGRLRNRRVEVWV 434
>gi|254524741|ref|ZP_05136796.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Stenotrophomonas
sp. SKA14]
gi|219722332|gb|EED40857.1| outer membrane lipoprotein, OmpA/SmpA/OmlA family [Stenotrophomonas
sp. SKA14]
Length = 280
Score = 51.0 bits (120), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 43/140 (30%), Gaps = 8/140 (5%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK- 78
+ P + + + F S + Q + + + + +
Sbjct: 134 SCAAVLDPPRPPAPPAPAPAPLPEQPLRLSADALFGFDSAKLSAEGQQAVQGILAQVREA 193
Query: 79 -HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+ G+ D +GS + + AL RRA AV V G+ A + G P V
Sbjct: 194 AQVQSIRVTGYTDRIGSASYNQALSQRRADAVRTALVQGGVPAGSISAEGRGAAEPIVQC 253
Query: 138 HD------EDAYAKNRRAIV 151
A NRR +
Sbjct: 254 EQHNRRELIACLAPNRRVQI 273
>gi|163754882|ref|ZP_02162003.1| hypothetical protein KAOT1_02672 [Kordia algicida OT-1]
gi|161324949|gb|EDP96277.1| hypothetical protein KAOT1_02672 [Kordia algicida OT-1]
Length = 560
Score = 51.0 bits (120), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 5/112 (4%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
++ ++ S ++ A + + + + I H D GS S+ AL RRA AV
Sbjct: 448 NINWNLGSATLTAAAKREIDTKLLPVLQTGVSVEIASHTDSRGSAASNEALSQRRAQAVT 507
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGH-----DEDAYAKNRRAIVFLKGCR 157
NY +++GI++S++ YG+ E + NRR + +
Sbjct: 508 NYLISKGINSSKIVSNGYGERRLLNRCKDGVSCTEREHLANRRTQFRVLDQK 559
>gi|161520074|ref|YP_001583501.1| OmpA/MotB domain-containing protein [Burkholderia multivorans ATCC
17616]
gi|160344124|gb|ABX17209.1| OmpA/MotB domain protein [Burkholderia multivorans ATCC 17616]
Length = 277
Score = 51.0 bits (120), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 34/81 (41%), Gaps = 6/81 (7%)
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV---YG 137
+ GH D +GS S+ AL RA V Y VA G+ A+R++ G P G
Sbjct: 195 TRIDVVGHTDRIGSDESNRALSRARAETVKRYLVAHGLDAARIRTEGAGSSQPVSHCPPG 254
Query: 138 HDE---DAYAKNRRAIVFLKG 155
K+RR + + G
Sbjct: 255 ESPAVIACLQKDRRVTITVYG 275
>gi|241667260|ref|ZP_04754838.1| OmpA family peptidoglycan-associated lipoprotein [Francisella
philomiragia subsp. philomiragia ATCC 25015]
gi|254875811|ref|ZP_05248521.1| peptidoglycan-associated lipoprotein [Francisella philomiragia
subsp. philomiragia ATCC 25015]
gi|254841832|gb|EET20246.1| peptidoglycan-associated lipoprotein [Francisella philomiragia
subsp. philomiragia ATCC 25015]
Length = 208
Score = 51.0 bits (120), Expect = 5e-05, Method: Composition-based stats.
Identities = 42/195 (21%), Positives = 72/195 (36%), Gaps = 44/195 (22%)
Query: 1 MQYS--TIFIILSAITMMSISGI-----DNLDTKISSPDTVLN-------------ESSL 40
M+ S +I ++ S + + S S D + K + D+ S
Sbjct: 1 MKKSIVSIAVVSSMLMLASCSSTRPDNSDLIKDKYAGVDSSQALEMSSQIYGSDNMSSDQ 60
Query: 41 QEQFSSSVGDS----VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
EQ + D V+F SY+I + L + + D + G+ D GS
Sbjct: 61 VEQMKKELMDINCRSVYFGFDSYNITDDAKECLDKTADYLIAHPDQPIKLSGNTDPRGSE 120
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG------------------ 137
+ LG +RA AV+NY + + ++ ++ V SYGK P+
Sbjct: 121 KYNFNLGQKRAEAVYNYLLGKNVNKDQICVVSYGKLKPAAEPTQFYDEFCTDGVNDMCSY 180
Query: 138 -HDEDAYAKNRRAIV 151
E A+ +RR +
Sbjct: 181 KASEKAFYLDRRTEI 195
>gi|254187351|ref|ZP_04893865.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237]
gi|157935033|gb|EDO90703.1| ompA family protein [Burkholderia pseudomallei Pasteur 52237]
Length = 571
Score = 51.0 bits (120), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 35/125 (28%), Gaps = 14/125 (11%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RN 96
+ + FD ++R + + LG D + GH D
Sbjct: 382 PQGWLLVFKSDGAFDVGKANVRADFMHNIERLGLAFAPWPGDLEVIGHTDSRPIRTSEFP 441
Query: 97 SSIALGLRRAYAVFNYFVA----------RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ AL RA V + ++ + G P AY +N
Sbjct: 442 DNQALSEARARNVADELRKTALPGGARAPENAVQRNIEYSGRGDAQPIDTAKTAAAYERN 501
Query: 147 RRAIV 151
RR V
Sbjct: 502 RRVDV 506
>gi|160874991|ref|YP_001554307.1| OmpA/MotB domain-containing protein [Shewanella baltica OS195]
gi|160860513|gb|ABX49047.1| OmpA/MotB domain protein [Shewanella baltica OS195]
gi|315267223|gb|ADT94076.1| OmpA/MotB domain protein [Shewanella baltica OS678]
Length = 276
Score = 51.0 bits (120), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 63/148 (42%), Gaps = 3/148 (2%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQF--SSSVGDSVFFDTSSYSIRPADIQ 67
LS +++ + + + S Q Q ++G +V F T S + +
Sbjct: 117 LSELSVKQQAAEKRASEYAKAQQELDELLSAQRQLLSELALGLNVQFRTGSSEVESHFLP 176
Query: 68 VLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT 126
L ++ + + + ++G+AD G + + AL +R V Y + +G++A RM
Sbjct: 177 QLDDVAEVMNLSPELNLELKGYADRRGDVSYNQALSEQRLLEVRGYLIKQGVAAERMTTQ 236
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
++G P D ++ +RR + L+
Sbjct: 237 AFGALSPLQAEQDRESDVFDRRVTLTLQ 264
>gi|330722512|gb|EGH00335.1| PsaB [gamma proteobacterium IMCC2047]
Length = 55
Score = 51.0 bits (120), Expect = 5e-05, Method: Composition-based stats.
Identities = 8/42 (19%), Positives = 13/42 (30%)
Query: 115 ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
+ R+ YG+ P D +NRR +
Sbjct: 7 EMDVDRDRLTAKGYGETQPRATNDSADGRQQNRRVTAVISAS 48
>gi|94986926|ref|YP_594859.1| flagellar motor protein [Lawsonia intracellularis PHE/MN1-00]
gi|94731175|emb|CAJ54537.1| Flagellar motor protein [Lawsonia intracellularis PHE/MN1-00]
Length = 237
Score = 51.0 bits (120), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 48/126 (38%), Gaps = 6/126 (4%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
P + S+ V + F + ++ P +V+ + + L +++ +I GHAD
Sbjct: 99 PQSATGISADDVGVLLRVNSNSTFLPGTATLTPEGKKVMGTVLAVLREYNLYLVIRGHAD 158
Query: 91 ELGS-----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
S+ L RA A Y V GI ASR++ Y P + K
Sbjct: 159 IGEITKGSPFASNWELSGARAAAAAQYLVEHGIKASRIRSVGYADTRPLEP-SSPEGSTK 217
Query: 146 NRRAIV 151
NRR
Sbjct: 218 NRRIEF 223
>gi|110639367|ref|YP_679576.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
gi|110282048|gb|ABG60234.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
Length = 712
Score = 51.0 bits (120), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 3/103 (2%)
Query: 54 FDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FD +S I P L + + ++ +I GH D G +++ L RA A+ +Y
Sbjct: 589 FDNNSSKILPEMEGDLDKVVDFLVDHPQIKLVISGHTDGSGDAAANLRLSQARADAIKSY 648
Query: 113 FVAR-GISASRMKVTSYGKEMPSVYGH-DEDAYAKNRRAIVFL 153
+ + I SR++ YG + P + E NRR L
Sbjct: 649 IMEKGNIDESRIEAVGYGNQKPIIQQEVSESDRKINRRVEFEL 691
>gi|197336852|ref|YP_002158687.1| OmpA family protein [Vibrio fischeri MJ11]
gi|197314104|gb|ACH63553.1| OmpA family protein [Vibrio fischeri MJ11]
Length = 274
Score = 51.0 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 52/129 (40%), Gaps = 1/129 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFL 84
+ + ++ L ++ + F +S + P I LS + D L
Sbjct: 129 QPPTDSNNGNSDIELAQKIHDLLNRDNQFAFNSAELNPKYIVNLSEASQLLNQHKDFKLL 188
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
I GHAD LG +++ L L RA V Y G+S R+ V S G P + G +
Sbjct: 189 ITGHADALGEEDANQNLALERAKQVKRYLSIFGLSQQRIHVDSVGSNDPYLSGTEPHVRL 248
Query: 145 KNRRAIVFL 153
NRR + L
Sbjct: 249 TNRRVTIEL 257
>gi|59714204|ref|YP_206979.1| outer membrane protein [Vibrio fischeri ES114]
gi|59482452|gb|AAW88091.1| outer membrane protein [Vibrio fischeri ES114]
Length = 274
Score = 51.0 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 52/129 (40%), Gaps = 1/129 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFL 84
+ + ++ L ++ + F +S + P I LS + D L
Sbjct: 129 QPPTDSNNGNSDIELAQKIHDLLNRDNQFAFNSAELNPKYIVNLSEASQLLNQHKDFKLL 188
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
I GHAD LG +++ L L RA V Y G+S R+ V S G P + G +
Sbjct: 189 ITGHADALGEEDANQNLALERAKQVKRYLSIFGLSQQRIHVDSVGSNDPYLSGTEPHVRL 248
Query: 145 KNRRAIVFL 153
NRR + L
Sbjct: 249 TNRRVTIEL 257
>gi|76819156|ref|YP_337240.1| hypothetical protein BURPS1710b_A2089 [Burkholderia pseudomallei
1710b]
gi|237509287|ref|ZP_04522002.1| type IV / VI secretion system protein, DotU family [Burkholderia
pseudomallei MSHR346]
gi|254198855|ref|ZP_04905273.1| ompA family protein [Burkholderia pseudomallei S13]
gi|254264296|ref|ZP_04955161.1| ompA family protein [Burkholderia pseudomallei 1710a]
gi|76583629|gb|ABA53103.1| OmpA domain protein [Burkholderia pseudomallei 1710b]
gi|169657027|gb|EDS88421.1| ompA family protein [Burkholderia pseudomallei S13]
gi|235001492|gb|EEP50916.1| type IV / VI secretion system protein, DotU family [Burkholderia
pseudomallei MSHR346]
gi|254215298|gb|EET04683.1| ompA family protein [Burkholderia pseudomallei 1710a]
Length = 571
Score = 51.0 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 35/125 (28%), Gaps = 14/125 (11%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RN 96
+ + FD ++R + + LG D + GH D
Sbjct: 382 PQGWLLVFKSDGAFDVGKANVRADFMHNIERLGLAFAPWPGDLEVIGHTDSRPIRTSEFP 441
Query: 97 SSIALGLRRAYAVFNYFVA----------RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ AL RA V + ++ + G P AY +N
Sbjct: 442 DNQALSEARARNVADELRKTALPGGARAPENAVQRNIEYSGRGDAQPIDTAKTAAAYERN 501
Query: 147 RRAIV 151
RR V
Sbjct: 502 RRVDV 506
>gi|260914077|ref|ZP_05920550.1| lipoprotein PlpD [Pasteurella dagmatis ATCC 43325]
gi|260631710|gb|EEX49888.1| lipoprotein PlpD [Pasteurella dagmatis ATCC 43325]
Length = 275
Score = 51.0 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 45/118 (38%), Gaps = 9/118 (7%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRR 105
S+ FD ++ +V+ ++ + L+ + G D LGS ++ L RR
Sbjct: 135 SLSGDFLFDFDKDALTAKGKEVVDSVATQLKSSGAKEVKVAGFTDRLGSAAYNLDLSQRR 194
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD-------EDAYAKNRRAIVFLKGC 156
A V + +G++A + YGK + +D NRR + G
Sbjct: 195 ANRVKARLIEQGVNA-NINAVGYGKAQQVKACEEYPFGKQLKDCLRPNRRVEITASGT 251
>gi|251733505|emb|CAR82502.1| pal [Ensifer adhaerens]
Length = 87
Score = 51.0 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 56 TSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
T S S+R Q L W + + IEGHADE G+R ++ALG RRA + +Y +
Sbjct: 1 TDSTSVRADAQQTLDRQAQWLAKYPNYAVTIEGHADERGTREYNLALGARRAASTKDYLI 60
Query: 115 ARGISASRMKVTSYGKEMPSVYGHD 139
+RG+ A+R+K SYGKE P D
Sbjct: 61 SRGVPANRLKTISYGKEKPVAVCDD 85
>gi|269123033|ref|YP_003305610.1| OmpA/MotB domain-containing protein [Streptobacillus moniliformis
DSM 12112]
gi|268314359|gb|ACZ00733.1| OmpA/MotB domain protein [Streptobacillus moniliformis DSM 12112]
Length = 367
Score = 51.0 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 34/102 (33%), Gaps = 2/102 (1%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
S D + ++ G+ D G+ ++ LGL RA +V Y
Sbjct: 268 ISGFDSGKFTLKQEHKNIIDSLISGLKDKEIIVVGYTDTDGTDKYNLNLGLNRAKSVKIY 327
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+G+ + S G + A NRR + +K
Sbjct: 328 LENKGVKVK--ETRSAGFNELIRDNKTSENKALNRRVEIMVK 367
>gi|257126466|ref|YP_003164580.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b]
gi|257050405|gb|ACV39589.1| OmpA/MotB domain protein [Leptotrichia buccalis C-1013-b]
Length = 149
Score = 51.0 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 24/73 (32%), Gaps = 4/73 (5%)
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV---TSYGKEMPSVYGH 138
G+ D G++ + L L RA V + + + G+E P
Sbjct: 67 TVDFVGYTDSTGTKKYNQKLSLIRARNVAR-LFREFGLKDAISIGKISGKGEEDPVDLND 125
Query: 139 DEDAYAKNRRAIV 151
+ NRR +
Sbjct: 126 TDQGKYSNRRVEI 138
>gi|53716506|ref|YP_105228.1| hypothetical protein BMAA0453 [Burkholderia mallei ATCC 23344]
gi|52422476|gb|AAU46046.1| OmpA domain protein [Burkholderia mallei ATCC 23344]
Length = 571
Score = 51.0 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 35/125 (28%), Gaps = 14/125 (11%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RN 96
+ + FD ++R + + LG D + GH D
Sbjct: 382 PQGWLLVFKSDGAFDVGKANVRADFMHNIERLGLAFAPWPGDLEVIGHTDSRPIRTSEFP 441
Query: 97 SSIALGLRRAYAVFNYFVA----------RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ AL RA V + ++ + G P AY +N
Sbjct: 442 DNQALSEARARNVADELRKTALPGGARAPENAVQRNIEYSGRGDAQPIDTAKTAAAYERN 501
Query: 147 RRAIV 151
RR V
Sbjct: 502 RRVDV 506
>gi|167839008|ref|ZP_02465785.1| hypothetical protein Bpse38_20639 [Burkholderia thailandensis
MSMB43]
Length = 560
Score = 51.0 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 35/125 (28%), Gaps = 14/125 (11%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RN 96
+ + FD +RP + + LG D + GH D
Sbjct: 360 PQGWLLVFKSDGAFDVGKAKVRPDFMHNIERLGLAFAPWPGDLEVIGHTDSRPIRTSEFP 419
Query: 97 SSIALGLRRAYAVFNYFVA----------RGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ AL RA V + ++ + G P AY +N
Sbjct: 420 DNQALSEARARTVADELRTTALPGGARAPENAVQRSIEYSGRGDAQPIDTAKTAAAYERN 479
Query: 147 RRAIV 151
RR V
Sbjct: 480 RRVDV 484
>gi|288962863|ref|YP_003453157.1| outer membrane protein [Azospirillum sp. B510]
gi|288915129|dbj|BAI76613.1| outer membrane protein [Azospirillum sp. B510]
Length = 347
Score = 51.0 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 1/105 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAV 109
VFFD +I P +++++ + + GH D GS + + L LRRA AV
Sbjct: 241 QVFFDWDKSAITPNSDKIIADAAEAAGRARAVRIQVIGHTDTSGSPSYNQKLSLRRAEAV 300
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
V G A+ + + G+ V NRRA + +K
Sbjct: 301 RKALVGHGTPANIISIEGVGENQLMVPTGPNVREPSNRRAQIMIK 345
>gi|224824631|ref|ZP_03697738.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002]
gi|224603124|gb|EEG09300.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002]
Length = 218
Score = 51.0 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 32/158 (20%), Positives = 58/158 (36%), Gaps = 17/158 (10%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
++ + + + + + ++ V FD + ++R L L S
Sbjct: 57 LVECGDKEAAKPAPTPVAEAPKPAMVAVKEKVTLSAKVLFDFNKTNLRADAKNELDPLVS 116
Query: 75 WLE--KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
L+ + ++GH D LGS + AL +RA AV NYFVA G+ A ++ G+
Sbjct: 117 RLKGDANLKSVEVDGHTDYLGSEKYNQALSQKRADAVKNYFVAAGVPAEKVTAVGKGESE 176
Query: 133 PSVYGHDE-------------DAYAKNRRAIVFLKGCR 157
DE +RR + + +
Sbjct: 177 --AKLTDECKAKKFKKKAALQACLEGDRRVELTIDTFK 212
>gi|163796351|ref|ZP_02190312.1| OmpA/MotB [alpha proteobacterium BAL199]
gi|159178493|gb|EDP63035.1| OmpA/MotB [alpha proteobacterium BAL199]
Length = 561
Score = 51.0 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/118 (25%), Positives = 41/118 (34%), Gaps = 16/118 (13%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF--------LIEGHADELGSRNSS- 98
V F + S I L + L + +EGH D + N
Sbjct: 445 FQSEVLFGSGSAQIGEPGKVKLGQFAATLREIAPRIPKNIGWILQVEGHTDTVPIHNEQF 504
Query: 99 ---IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA +V Y V +GI A R+ T YG+ P D +NRR + L
Sbjct: 505 RSNWELSAARAISVVKYLVDQGIPAERLSATGYGEYQPI----DPADLERNRRIEMKL 558
>gi|163733012|ref|ZP_02140456.1| OmpA domain protein [Roseobacter litoralis Och 149]
gi|161393547|gb|EDQ17872.1| OmpA domain protein [Roseobacter litoralis Och 149]
Length = 519
Score = 51.0 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 37/105 (35%), Gaps = 7/105 (6%)
Query: 57 SSYSIRPADIQVLSNLGS---WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYF 113
S + + L + G +D GS +++ + L RA +V +
Sbjct: 415 GSARLDAQSRSNVVQLAHDLEQGRFDARQMIFVGFSDGQGSAEANMEIALSRANSVADAV 474
Query: 114 VARGI----SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ M+V ++G+ MP NRR V+++
Sbjct: 475 RTKAETADLMQIDMQVDAFGEAMPLACDDSVWGRQANRRVEVWVR 519
>gi|325279496|ref|YP_004252038.1| OmpA/MotB domain-containing protein [Odoribacter splanchnicus DSM
20712]
gi|324311305|gb|ADY31858.1| OmpA/MotB domain protein [Odoribacter splanchnicus DSM 20712]
Length = 782
Score = 50.6 bits (119), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 49/131 (37%), Gaps = 28/131 (21%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAV 109
+++FD + + +RP Q L L + LE + + H D +G+ ++ L RA AV
Sbjct: 541 NIYFDVAKWELRPEARQNLEELLTILEDNPNITIELSAHTDMVGNDEANRILSEHRARAV 600
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHD---------------------------EDA 142
+Y + +G+ R++ YG+ P E A
Sbjct: 601 VDYLIGKGVYWDRLEAKGYGETQPRQINEKDAREYPFFKVGEVLNERFFGRLRGEQRETA 660
Query: 143 YAKNRRAIVFL 153
NRR +
Sbjct: 661 LQLNRRIEFKV 671
>gi|171057549|ref|YP_001789898.1| OmpA/MotB domain-containing protein [Leptothrix cholodnii SP-6]
gi|170774994|gb|ACB33133.1| OmpA/MotB domain protein [Leptothrix cholodnii SP-6]
Length = 230
Score = 50.6 bits (119), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 42/133 (31%), Gaps = 8/133 (6%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL 84
+ + + +S++E S R + +
Sbjct: 86 KPSSPASVAIASPTSIREVMQPLANSIYTVQFDYGSSRVNLAPTFLRAVLDQARTAPLVV 145
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP----SVYGHDE 140
+ G D + + RA AV ++ VA G+ +R++ T P +
Sbjct: 146 LRGRTDGTQDVAAEGRIARERAQAVKSHLVAAGLDPNRIRTTW----QPTGDHAADNGTP 201
Query: 141 DAYAKNRRAIVFL 153
D A+NRR + +
Sbjct: 202 DGQARNRRVEIEV 214
>gi|32472143|ref|NP_865137.1| outer membrane protein A (OmpA) [Rhodopirellula baltica SH 1]
gi|32397515|emb|CAD72821.1| probable outer membrane protein A (OmpA) [Rhodopirellula baltica SH
1]
Length = 259
Score = 50.6 bits (119), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/128 (15%), Positives = 37/128 (28%), Gaps = 7/128 (5%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE--KHDCDFLIEGHAD 90
L E + F + ++P+ +L + L IEG+ D
Sbjct: 127 GGLKVEQDGEVLRVVLPSDQLFAQGTGQLQPSAGAILDPTAAQLRSVFPRQRIGIEGYTD 186
Query: 91 ELGSRN----SSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAK 145
S+ L + AV ++ R ++ + G P
Sbjct: 187 NAPMYGGAAGSAHQLTSAQTGAVLDWLTRRSGMPEQQLFTVAQGSNNPRKDNTTPAGRVA 246
Query: 146 NRRAIVFL 153
NRR + +
Sbjct: 247 NRRIELVI 254
>gi|332969794|gb|EGK08805.1| OmpA/MotB domain protein [Psychrobacter sp. 1501(2011)]
Length = 211
Score = 50.6 bits (119), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 50/141 (35%), Gaps = 6/141 (4%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
N I S L ++ S F++ S + + L + +EK+
Sbjct: 57 CPNTPWNIVVDPNGCPASLLPKEGSVHAEYRGFYEEGSSQLTKEYLNELDKIAGLMEKYP 116
Query: 81 CDFL-----IEGHADELGSRNSSIALGLRRAYAVFNYFV-ARGISASRMKVTSYGKEMPS 134
F+ I +L S+ L L R V NY + I +R++ +YG E P
Sbjct: 117 DAFMSLEAHISEPESKLKKNLSNQTLSLARVEGVKNYLILKHKIDPNRIRTYTYGAERPI 176
Query: 135 VYGHDEDAYAKNRRAIVFLKG 155
+ + N+R ++
Sbjct: 177 ASNDEVEGIRLNQRVYAVIRN 197
>gi|251733503|emb|CAR82501.1| pal [Ensifer adhaerens]
Length = 87
Score = 50.6 bits (119), Expect = 7e-05, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 56 TSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
T S SIR Q L W + + +EGHADE G+R ++ALG RRA + +Y +
Sbjct: 1 TDSTSIRADAQQTLDRQAQWLAKYPNYAVTVEGHADERGTREYNLALGARRAASTKDYLI 60
Query: 115 ARGISASRMKVTSYGKEMPSVYGHD 139
+RG+ A+R+K SYGKE P D
Sbjct: 61 SRGVPANRLKTISYGKEKPVAVCDD 85
>gi|254452952|ref|ZP_05066389.1| OmpA/MotB [Octadecabacter antarcticus 238]
gi|198267358|gb|EDY91628.1| OmpA/MotB [Octadecabacter antarcticus 238]
Length = 668
Score = 50.6 bits (119), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 42/120 (35%), Gaps = 14/120 (11%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLG--------SWLEKHDCDFLIEGHADELG-----S 94
V F+ + + + ++ + E D ++GH D +
Sbjct: 546 FSSEVLFEQGAARLSADGQREIAKVAAILRDVAGDIPESIDWVIRVDGHTDNVPLSGAGE 605
Query: 95 RNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L RA +V Y V I R+ +G+ P +A A+NRR + L
Sbjct: 606 FANNWELSQARALSVVLYMVNFLAIPPDRLAANGFGQYQPINLEDTTEARAQNRRIELKL 665
>gi|327479120|gb|AEA82430.1| outer membrane protein [Pseudomonas stutzeri DSM 4166]
Length = 187
Score = 50.6 bits (119), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Query: 58 SYSIRPADIQVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
S + Q+L ++ + D + GH D LG R ++ +G+RRA + AR
Sbjct: 90 SGELDAGAEQLLDSVLLAARRRDYPVVTVIGHTDTLGHRAANEQVGMRRAQRMAELLRAR 149
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G+ A ++V S+G+ V D A +NRR V ++
Sbjct: 150 GLEAMELRVESHGERNLLVATPDATAEPRNRRVEVLVR 187
>gi|257125830|ref|YP_003163944.1| Outer membrane protein and related peptidoglycan- associated
(lipo)protein-like protein [Leptotrichia buccalis
C-1013-b]
gi|257049769|gb|ACV38953.1| Outer membrane protein and related peptidoglycan- associated
(lipo)protein-like protein [Leptotrichia buccalis
C-1013-b]
Length = 254
Score = 50.6 bits (119), Expect = 7e-05, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 29/78 (37%), Gaps = 4/78 (5%)
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV--TSYGKEMPSVYGHD 139
+F I G+AD + N+ L L RA + + G+ G E P
Sbjct: 163 EFEIVGYAD--KTENNKNKLSLLRAEKMSEFLKQNGLRKDIKITKMIGKGSENPIDTNDT 220
Query: 140 EDAYAKNRRAIVFLKGCR 157
+ NRR + LK +
Sbjct: 221 VEGRYNNRRVEILLKNGK 238
>gi|238897463|ref|YP_002923140.1| outer membrane protein 3a (II*;G;d) [Candidatus Hamiltonella
defensa 5AT (Acyrthosiphon pisum)]
gi|188474314|gb|ACD49741.1| outer membrane protein A [Candidatus Hamiltonella defensa]
gi|229465218|gb|ACQ66992.1| outer membrane protein 3a (II*;G;d) [Candidatus Hamiltonella
defensa 5AT (Acyrthosiphon pisum)]
Length = 365
Score = 50.6 bits (119), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 58/151 (38%), Gaps = 13/151 (8%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS---WL 76
+ + P T ++ + + + V F + ++++ + L+ L S +
Sbjct: 202 NQEKPPEILPEPVTKIDLEPVAQTQHFELKSDVLFGFNQWTLKKEGGEELNKLYSKLANV 261
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSV 135
+ + G +D +G + L +RA +V +Y +++GIS+ + GK P
Sbjct: 262 NPQEGSVTVLGFSDRIGGDKYNQLLSQKRAQSVADYLISKGISSDTPFVIKGLGKSNPVT 321
Query: 136 YGHDED---------AYAKNRRAIVFLKGCR 157
+ A +RR V + G +
Sbjct: 322 GSKCNEVKKRLELVNCLAPDRRVDVKVTGNK 352
>gi|218709511|ref|YP_002417132.1| outer membrane protein [Vibrio splendidus LGP32]
gi|218322530|emb|CAV18689.1| Outer membrane protein [Vibrio splendidus LGP32]
Length = 278
Score = 50.6 bits (119), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 51/116 (43%), Gaps = 1/116 (0%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNS 97
S+ EQ + F +S + P + L+ + L+++ D ++ GHAD G+
Sbjct: 150 SVIEQLYDLLNVDNQFAENSTEVNPKYMGRLAEATTLLKENKSLDLVVTGHADATGTEEY 209
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L L RA V Y G+ R+K S G+ +P G + NRR + +
Sbjct: 210 NDDLALGRAKQVERYLTIFGLGVQRIKAVSVGETVPLFEGESDGTRLTNRRVSIEV 265
>gi|194366090|ref|YP_002028700.1| OmpA/MotB domain-containing protein [Stenotrophomonas maltophilia
R551-3]
gi|194348894|gb|ACF52017.1| OmpA/MotB domain protein [Stenotrophomonas maltophilia R551-3]
Length = 278
Score = 50.6 bits (119), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 41/112 (36%), Gaps = 8/112 (7%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEK--HDCDFLIEGHADELGSRNSSIALGLRR 105
+ F S + Q + + + + + + G+ D +GS + + AL RR
Sbjct: 160 LSADALFGFDSAVLSAEGQQAVQGVLAQVREASQVQSIRVTGYTDRIGSASYNQALSQRR 219
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE------DAYAKNRRAIV 151
A AV + V G+ A+ + G P V A NRR +
Sbjct: 220 AEAVRSALVQGGVPAASISAEGRGAAEPIVQCEQRNRRELIACLAPNRRVQI 271
>gi|134302256|ref|YP_001122225.1| OmpA family protein [Francisella tularensis subsp. tularensis
WY96-3418]
gi|254369037|ref|ZP_04985050.1| hypothetical protein FTAG_00877 [Francisella tularensis subsp.
holarctica FSC022]
gi|134050033|gb|ABO47104.1| OmpA family protein [Francisella tularensis subsp. tularensis
WY96-3418]
gi|157121958|gb|EDO66128.1| hypothetical protein FTAG_00877 [Francisella tularensis subsp.
holarctica FSC022]
Length = 207
Score = 50.6 bits (119), Expect = 7e-05, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 69/190 (36%), Gaps = 39/190 (20%)
Query: 1 MQYSTI--FIILSAITMMSISGIDNLDTKISSPDTVLN-------------ESSLQEQFS 45
M + I ++L++ + D + K + D+ S EQ
Sbjct: 7 MNLAVIGSMLMLASCSSTRPDNSDLIKDKYAGVDSSQALEMSSQIYGSDKLSSDQVEQMK 66
Query: 46 SSVGDS----VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIA 100
+ + V+F SY+I + L + + D + G+ D GS +
Sbjct: 67 KELMNINCRSVYFGFDSYNITDDAKECLDKTADYLIAHPDQPIKLSGNTDPRGSEKYNFN 126
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG-------------------HDED 141
LG +RA AV+NY + + ++ ++ V SYGK P+ E
Sbjct: 127 LGQKRAEAVYNYLLGKNVNKDQICVVSYGKLKPAAEPTQFYDEFCKDGVNDACMYKASEK 186
Query: 142 AYAKNRRAIV 151
A+ +RR +
Sbjct: 187 AFYLDRRTEI 196
>gi|154245935|ref|YP_001416893.1| OmpA/MotB domain-containing protein [Xanthobacter autotrophicus
Py2]
gi|154160020|gb|ABS67236.1| OmpA/MotB domain protein [Xanthobacter autotrophicus Py2]
Length = 220
Score = 50.6 bits (119), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 56/143 (39%), Gaps = 6/143 (4%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL 72
++ ++ G+ K + P + Q + + + FD +S I+P + L ++
Sbjct: 68 VSAEALRGLAQAHMKYTGPPESRPPLAAQLDQLAQINVEIVFDLNSAMIKPESYRTLGSI 127
Query: 73 GSWLEKHD---CDFLIEGHADELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSY 128
+ FL+ G+ D G+R ++ L R+ AV + R++
Sbjct: 128 ADAMHNPVLLGYKFLVVGNTDATGTRELNMKLSQERSDAVVEALSTTFRVDPRRLQSVGL 187
Query: 129 GKEMPSVYGHDEDAYAKNRRAIV 151
G+E H + A NRR +
Sbjct: 188 GEEALQDPKHPDA--AINRRVQI 208
>gi|298372620|ref|ZP_06982610.1| OmpA family protein [Bacteroidetes oral taxon 274 str. F0058]
gi|298275524|gb|EFI17075.1| OmpA family protein [Bacteroidetes oral taxon 274 str. F0058]
Length = 681
Score = 50.6 bits (119), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 47/138 (34%), Gaps = 28/138 (20%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYA 108
+++F++ ++I L+NL LE + + H D +G+ S+I L +RA +
Sbjct: 542 ENIFYEFGKWNITKESEAELNNLVKLLEDNPNITIELSAHTDSVGTDASNIELSQKRANS 601
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSV---------------YGHDED------------ 141
Y + GI+ R+ YG+ P +
Sbjct: 602 AVEYLIGAGIAKDRLTAKGYGENKPVIVDSFLAQKYTFLKEGDELTPQFIAKLSKENQAI 661
Query: 142 AYAKNRRAIVFLKGCRAN 159
NRR + N
Sbjct: 662 CNQINRRTEFRVLRTTYN 679
>gi|251733445|emb|CAR82472.1| pal [Bradyrhizobium elkanii]
Length = 87
Score = 50.6 bits (119), Expect = 7e-05, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 56 TSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
+ + P L WL+ ++ F IEGHADE G+R +IALG RRA +V Y
Sbjct: 1 SDQTDLSPQATATLDKQAQWLQTYNRYSFTIEGHADERGTREYNIALGARRAQSVRAYLA 60
Query: 115 ARGISASRMKVTSYGKEMPSVYGHD 139
+RGI SRM+ SYGKE P +D
Sbjct: 61 SRGIDPSRMRTISYGKERPVAVCND 85
>gi|146280852|ref|YP_001171005.1| outer membrane protein [Pseudomonas stutzeri A1501]
gi|145569057|gb|ABP78163.1| outer membrane protein [Pseudomonas stutzeri A1501]
Length = 179
Score = 50.6 bits (119), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Query: 58 SYSIRPADIQVLSNLGSWLEKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
S + Q+L ++ + D + GH D LG R ++ +G+RRA + AR
Sbjct: 82 SGELDAGAEQLLDSVLLAARRRDYPVVTVIGHTDTLGHRAANEQVGMRRAQRMAELLRAR 141
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G+ A ++V S+G+ V D A +NRR V ++
Sbjct: 142 GLEAMELRVESHGERNLLVATPDATAEPRNRRVEVLVR 179
>gi|53713187|ref|YP_099179.1| OmpA family outer membrane protein [Bacteroides fragilis YCH46]
gi|60681448|ref|YP_211592.1| OmpA family membrane protein [Bacteroides fragilis NCTC 9343]
gi|253566855|ref|ZP_04844307.1| OmpA family outer membrane protein [Bacteroides sp. 3_2_5]
gi|265763283|ref|ZP_06091851.1| OmpA family outer membrane protein [Bacteroides sp. 2_1_16]
gi|52216052|dbj|BAD48645.1| OmpA family outer membrane protein [Bacteroides fragilis YCH46]
gi|60492882|emb|CAH07657.1| putative outer membrane protein OmpA-family [Bacteroides fragilis
NCTC 9343]
gi|251944418|gb|EES84907.1| OmpA family outer membrane protein [Bacteroides sp. 3_2_5]
gi|263255891|gb|EEZ27237.1| OmpA family outer membrane protein [Bacteroides sp. 2_1_16]
gi|301162908|emb|CBW22455.1| putative outer membrane protein OmpA-family [Bacteroides fragilis
638R]
Length = 224
Score = 50.6 bits (119), Expect = 7e-05, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 6/121 (4%)
Query: 34 VLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADEL 92
+ +++ + + F +S ++ A Q L+ + L++ D I GH D++
Sbjct: 93 QVTDNNGLAAVKVTFPSGILFAFNSSALSAASKQSLAEFANILKEDPTVDVAIIGHTDKV 152
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIV 151
GS ++ + RAYAV NY A G+ + K V G + +NRR +
Sbjct: 153 GSYEANQKVSANRAYAVENYLQACGVKPYQFKKVEGVGYSQ-YNESETPE---QNRRVEI 208
Query: 152 F 152
F
Sbjct: 209 F 209
>gi|307726627|ref|YP_003909840.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003]
gi|307587152|gb|ADN60549.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003]
Length = 367
Score = 50.6 bits (119), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 7/75 (9%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE-- 140
I G+ D LGS + + L +RA V Y G++ + GK+ P V HD
Sbjct: 269 IRIAGYTDRLGSDSYNRQLSTKRAETVKRYLQNGGVTTP-ISARGRGKDNPVVECHDANR 327
Query: 141 ----DAYAKNRRAIV 151
D A NRR +
Sbjct: 328 QALIDCLAANRRVEL 342
>gi|86360406|ref|YP_472294.1| hypothetical protein RHE_PE00129 [Rhizobium etli CFN 42]
gi|86284508|gb|ABC93567.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 653
Score = 50.6 bits (119), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 38/111 (34%), Gaps = 7/111 (6%)
Query: 46 SSVGDSVFFDTSSYSIRP-ADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLR 104
S+ + FD + L + E+ ++ GH D G + + L R
Sbjct: 540 VSIPVPITFDFDKSTFTSIGTEAAEELLEALKEQKPGRVILIGHTDRKGGDDYNQKLSER 599
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE-----DAYAKNRRAI 150
RA AV ++ GI A+ + G P D A NRR
Sbjct: 600 RAQAVADFLKNHGIDAT-IDAEGRGASEPVDVTATANLTEDDIDALNRRVE 649
>gi|298293019|ref|YP_003694958.1| OmpA/MotB domain protein [Starkeya novella DSM 506]
gi|296929530|gb|ADH90339.1| OmpA/MotB domain protein [Starkeya novella DSM 506]
Length = 344
Score = 50.6 bits (119), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 44/118 (37%), Gaps = 12/118 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGS--------WLEKHDCDFLIEGHADELGS----R 95
+FFD +S +RP + L L ++GH D
Sbjct: 224 FQSEIFFDRASADLRPDAMPALDKLAEALVALEKEIPSDISWVLRVDGHTDNRPIATPLF 283
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S+ L R+ AV Y +G+S + +G+ P +DA A+NRR + L
Sbjct: 284 PSNWQLSAARSIAVVQYLAGKGVSPQHLVAAGFGEYQPIDDADSDDARARNRRIELKL 341
>gi|283955761|ref|ZP_06373252.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
jejuni 1336]
gi|283792716|gb|EFC31494.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
jejuni 1336]
Length = 247
Score = 50.6 bits (119), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 43/125 (34%), Gaps = 6/125 (4%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSI-RPADIQVLSNLGS--WLEKHDCDFLIEGHADELGSR 95
Q + ++ V F+ S I L + I G+ D S
Sbjct: 108 QSDNQVALNLPSKVEFERGSAQIVSADIQDYLKRMAELTTYLPPQAKIEIRGYTDNSDSI 167
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
S L +RA V YF+ G + + + SYG P + A N R ++ K
Sbjct: 168 IRSYELAYQRAENVLKYFIEGGANLKNISIKSYGLNNPI--NGNPQALENN-RVEIYFKV 224
Query: 156 CRANT 160
A+T
Sbjct: 225 DTADT 229
>gi|312114023|ref|YP_004011619.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100]
gi|311219152|gb|ADP70520.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100]
Length = 302
Score = 50.6 bits (119), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI-EGHADELGSRNSSIALGLRRA 106
V + F+T + P Q L + + + +I EGH DE G+ ++ L RR
Sbjct: 190 VPLPIQFETDRDELTPVGRQYADELAAAINEQRPAVIILEGHTDERGTDAHNMDLSKRRV 249
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGH-----DEDAYAKNRRAI 150
V Y A+R++ + GK P V + +E + NRR +
Sbjct: 250 ERVAAYLKREKGVAARIETRARGKTEPYVPQNASNLTNEQLWELNRRVV 298
>gi|190574772|ref|YP_001972617.1| putative OmpA family protein [Stenotrophomonas maltophilia K279a]
gi|190012694|emb|CAQ46322.1| putative OmpA family protein [Stenotrophomonas maltophilia K279a]
Length = 300
Score = 50.6 bits (119), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 40/112 (35%), Gaps = 8/112 (7%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEK--HDCDFLIEGHADELGSRNSSIALGLRR 105
+ F S + Q + + + + + + G+ D +GS + + L +R
Sbjct: 182 LSADALFGFDSAVLSAEGQQAVQGILAQVREAAQVQSIRVTGYTDRIGSASYNQTLSQQR 241
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE------DAYAKNRRAIV 151
A AV + V G+ A+ + G P V A NRR +
Sbjct: 242 AEAVRSALVQGGVPAASISAEGRGAAEPIVQCEQRNRRELIACLAPNRRVQI 293
>gi|327189348|gb|EGE56516.1| putative outer membrane protein, OmpA family [Rhizobium etli
CNPAF512]
Length = 722
Score = 50.6 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 8/108 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWL-----EKHDCDFLIEGHADELGSRNSSIALGLR 104
D++ F T S I A + L + + + FLIEGH D +GS S++ L +
Sbjct: 603 DTITFATGSAEIPMAQARTLRKVADAISQVLKKDPSETFLIEGHTDAVGSDQSNLVLSDQ 662
Query: 105 RAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA +V N GI M YG+ V + +NRR +
Sbjct: 663 RAESVANVLSDVYGIPPENMATQGYGERYLKVNTAGPE--QENRRVTI 708
>gi|315633444|ref|ZP_07888734.1| lipoprotein PlpD [Aggregatibacter segnis ATCC 33393]
gi|315477486|gb|EFU68228.1| lipoprotein PlpD [Aggregatibacter segnis ATCC 33393]
Length = 273
Score = 50.6 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 48/119 (40%), Gaps = 7/119 (5%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALG 102
+S S+ FD + ++ ++V+ N+ L+ ++G+ D LGS ++AL
Sbjct: 135 YSFSLSGDFLFDFNKDTLTAQGVEVIDNIAQQLKSAKAKEVTVDGYTDRLGSDRYNLALS 194
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD-----EDAYAKNRRAIVFLKGC 156
RRA V G+ A + +GK +D A NRR + G
Sbjct: 195 QRRADRVKARLAELGLKAH-IVAIGHGKANQVKACDGSGQALKDCLAPNRRVEISSSGS 252
>gi|251733447|emb|CAR82473.1| pal [Bradyrhizobium japonicum]
Length = 87
Score = 50.6 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 56 TSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
+ + P I L W F IEGHADE G+R +IALG RRA +V ++
Sbjct: 1 SDQTDLTPQAIVTLEKQAQWLQNYRQYSFTIEGHADERGTREYNIALGARRAQSVRSFLA 60
Query: 115 ARGISASRMKVTSYGKEMPSVYGHD 139
+RGI +RM+ SYGKE P +D
Sbjct: 61 SRGIDPNRMRTISYGKERPVAVCND 85
>gi|259417565|ref|ZP_05741484.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
gi|259346471|gb|EEW58285.1| OmpA/MotB [Silicibacter sp. TrichCH4B]
Length = 517
Score = 50.6 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 37/105 (35%), Gaps = 7/105 (6%)
Query: 57 SSYSIRPADIQVLSNLGSWLE---KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYF 113
S + + LE + G +D G + A+ L+RA +V
Sbjct: 413 GSSRPDAQSRNNIDLIARELEAGVYDGKRMVFVGFSDGEGPAEGNRAIALKRAESVRRAV 472
Query: 114 VARGISAS----RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+A+ ++ +YG+ +P NRR V+++
Sbjct: 473 ERAAETANLDRITIETAAYGEALPIACDDSAWGRQANRRVEVWVR 517
>gi|57237387|ref|YP_178400.1| flagellar motor protein MotB [Campylobacter jejuni RM1221]
gi|86151261|ref|ZP_01069476.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
jejuni 260.94]
gi|86153764|ref|ZP_01071967.1| flagellar motor component MotB [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|121612816|ref|YP_001000046.1| flagellar motor protein MotB [Campylobacter jejuni subsp. jejuni
81-176]
gi|148926431|ref|ZP_01810114.1| putative flagellar motor protein [Campylobacter jejuni subsp.
jejuni CG8486]
gi|157414633|ref|YP_001481889.1| flagellar motor protein MotB [Campylobacter jejuni subsp. jejuni
81116]
gi|167005002|ref|ZP_02270760.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
jejuni 81-176]
gi|205356014|ref|ZP_03222782.1| putative flagellar motor protein [Campylobacter jejuni subsp.
jejuni CG8421]
gi|315123901|ref|YP_004065905.1| flagellar motor protein [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|57166191|gb|AAW34970.1| chemotaxis protein MotB, putative [Campylobacter jejuni RM1221]
gi|85841608|gb|EAQ58855.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
jejuni 260.94]
gi|85842725|gb|EAQ59937.1| flagellar motor component MotB [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|87250338|gb|EAQ73296.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
jejuni 81-176]
gi|145844594|gb|EDK21700.1| putative flagellar motor protein [Campylobacter jejuni subsp.
jejuni CG8486]
gi|157385597|gb|ABV51912.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
jejuni 81116]
gi|205346138|gb|EDZ32773.1| putative flagellar motor protein [Campylobacter jejuni subsp.
jejuni CG8421]
gi|307747273|gb|ADN90543.1| Chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
jejuni M1]
gi|315017623|gb|ADT65716.1| flagellar motor protein [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|315931586|gb|EFV10552.1| ompA family protein [Campylobacter jejuni subsp. jejuni 327]
Length = 247
Score = 50.6 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 43/125 (34%), Gaps = 6/125 (4%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSI-RPADIQVLSNLGS--WLEKHDCDFLIEGHADELGSR 95
Q + ++ V F+ S I L + I G+ D S
Sbjct: 108 QSDNQVALNLPSKVEFERGSAQIVSADIQDYLKRMAELTTYLPPQAKIEIRGYTDNSDSI 167
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
S L +RA V YF+ G + + + SYG P + A N R ++ K
Sbjct: 168 IRSYELAYQRAENVLKYFIEGGANLKNISIKSYGLNNPI--NGNPQALENN-RVEIYFKV 224
Query: 156 CRANT 160
A+T
Sbjct: 225 DTADT 229
>gi|329895780|ref|ZP_08271156.1| hypothetical protein IMCC3088_1693 [gamma proteobacterium IMCC3088]
gi|328922142|gb|EGG29499.1| hypothetical protein IMCC3088_1693 [gamma proteobacterium IMCC3088]
Length = 44
Score = 50.6 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 8/42 (19%), Positives = 17/42 (40%)
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +G++ R VT + P + +NRR + +
Sbjct: 1 MIINQGLAELRFSVTGFADTEPVDTNETPASRQRNRRVEIII 42
>gi|218506976|ref|ZP_03504854.1| hypothetical protein RetlB5_04850 [Rhizobium etli Brasil 5]
Length = 39
Score = 50.6 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 118 ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ A R+ +G+ P G DA A NRR + L
Sbjct: 1 MPADRLVAAGFGEFQPIAPGDAPDARATNRRIELKL 36
>gi|329118055|ref|ZP_08246768.1| OmpA family protein [Neisseria bacilliformis ATCC BAA-1200]
gi|327465943|gb|EGF12215.1| OmpA family protein [Neisseria bacilliformis ATCC BAA-1200]
Length = 248
Score = 50.6 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 52/132 (39%), Gaps = 19/132 (14%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIA 100
+ S+ + F ++RP I L++L L + +EGH D +GS + A
Sbjct: 79 ADETVSLSANTLFGFDKDNLRPQAIDTLNDLAGRLSNENVQAVRVEGHTDFMGSEQYNQA 138
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKE--MPSVYGHD---------EDAYAK---- 145
L RRA V NY V +G+ A ++ G+ + D A+
Sbjct: 139 LSERRANVVANYLVNQGVPAGKISAVGLGESQAQMTATCEDQLKGKKLSKAKRRAQLIAC 198
Query: 146 ---NRRAIVFLK 154
+RR V ++
Sbjct: 199 IEPDRRVDVKIR 210
>gi|282859313|ref|ZP_06268425.1| OmpA family protein [Prevotella bivia JCVIHMP010]
gi|282587893|gb|EFB93086.1| OmpA family protein [Prevotella bivia JCVIHMP010]
Length = 226
Score = 50.6 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 56/132 (42%), Gaps = 5/132 (3%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-D 80
+ ++ + +++ + + + F +SY++ A + L ++ + D
Sbjct: 80 EVASRVPNASVEKVTDANGLQCVKVTFDSGILFPLNSYTLSSASKKDLYEFAKVMKANAD 139
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHD 139
CD I+G+ D GS N ++ L RA AV + + G+S ++ V G P +
Sbjct: 140 CDVAIQGYTDASGSDNINLPLSQNRANAVSSCLRSNGVSGRQIRSVEGLGSANPI---EN 196
Query: 140 EDAYAKNRRAIV 151
KNRR V
Sbjct: 197 ARVSQKNRRVEV 208
>gi|149370443|ref|ZP_01890132.1| OmpA domain protein [unidentified eubacterium SCB49]
gi|149355994|gb|EDM44551.1| OmpA domain protein [unidentified eubacterium SCB49]
Length = 432
Score = 50.6 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 3/132 (2%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDC 81
N D SP+TV N S +++ + V+F T+S + ++ ++ L ++ ++
Sbjct: 302 NKDDYKPSPNTVTNGSVIKDLLEKGYVN-VYFKTNSSTPEKYSLEAVNYLKTYLIQNPSA 360
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
+ G+ADE+G+ + L +RA V++ VA GI A+R+ T G++ +
Sbjct: 361 SAQLIGYADEIGNEAYNAQLSEKRAKRVYDILVASGIDANRLSHTGNGEDTSVDKNSS-E 419
Query: 142 AYAKNRRAIVFL 153
A RR L
Sbjct: 420 ARQLVRRVTFKL 431
>gi|291615184|ref|YP_003525341.1| OmpA/MotB domain protein [Sideroxydans lithotrophicus ES-1]
gi|291585296|gb|ADE12954.1| OmpA/MotB domain protein [Sideroxydans lithotrophicus ES-1]
Length = 185
Score = 50.6 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/184 (13%), Positives = 54/184 (29%), Gaps = 32/184 (17%)
Query: 3 YSTIFIILSAITMMSISG---------------------IDNLDTKISSPDTVLNESSLQ 41
I ++ S ++ + + + + + +
Sbjct: 1 MRKILLVASLLSFTATCAHAGLMDDLKKPGGGDLGAKITDQAREKARAKGNQQIASQVNK 60
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG----------SWLEKHDCDFLIEGHADE 91
+ + + F + + + L + F++ GH D
Sbjct: 61 KLLAEGRKNQCSFKSGTDVLEAGCGAKSKKLANVIIDVKKSLQSQGQKGFKFIVSGHTDS 120
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV-YGHDEDAYAKNRRAI 150
G + L RRA + +A+G+ A ++ G E V + AKNRR
Sbjct: 121 SGDATKNKELSARRARVMVKELIAQGVDAGDIEAVGMGSEKMLVKPDNTPAKKAKNRRYE 180
Query: 151 VFLK 154
V ++
Sbjct: 181 VQVR 184
>gi|167572708|ref|ZP_02365582.1| ompA family protein [Burkholderia oklahomensis C6786]
Length = 276
Score = 50.6 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 46/141 (32%), Gaps = 15/141 (10%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIR---PADIQVLSNLG---SWLEKHDCDFL 84
P + + ++ + F ++R P+ L + +H
Sbjct: 136 PAPTVQTAPSDNVKQFTLDYHLLFPFDKSALRDLLPSGRAELDRIAATLQQQYQHIRSVR 195
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY- 143
+ G+ D LG+ + L L RA + +Y RG+ + GK P
Sbjct: 196 VTGYTDRLGTDEYNRQLSLARAETIRSYLTTRGLPGDLIVAQGLGKADPV-SAGCPAGRS 254
Query: 144 -------AKNRRAIVFLKGCR 157
A +RR + + G R
Sbjct: 255 SEAIACLAPDRRVRIDVAGER 275
>gi|167565602|ref|ZP_02358518.1| ompA family protein [Burkholderia oklahomensis EO147]
Length = 276
Score = 50.6 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 46/141 (32%), Gaps = 15/141 (10%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIR---PADIQVLSNLG---SWLEKHDCDFL 84
P + + ++ + F ++R P+ L + +H
Sbjct: 136 PAPTVQTAPSDNVKQFTLDYHLLFPFDKSALRDLLPSGRAELDRIAATLQQQYQHIRSVR 195
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY- 143
+ G+ D LG+ + L L RA + +Y RG+ + GK P
Sbjct: 196 VTGYTDRLGTDEYNRQLSLARAETIRSYLTTRGLPGDLIVAQGLGKADPV-SAGCPAGRS 254
Query: 144 -------AKNRRAIVFLKGCR 157
A +RR + + G R
Sbjct: 255 SEAIACLAPDRRVRIDVAGER 275
>gi|23012822|ref|ZP_00052818.1| COG2885: Outer membrane protein and related
peptidoglycan-associated (lipo)proteins
[Magnetospirillum magnetotacticum MS-1]
Length = 278
Score = 50.6 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 41/105 (39%), Gaps = 3/105 (2%)
Query: 51 SVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
V+FD + ++ + L + S + + GH D +G + L RA AV
Sbjct: 175 IVYFDFNKSTLTKEAQKTLKEVVASAGQIKPSSIYVAGHTDTVGKAGYNDKLSKARAAAV 234
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G+ + + ++G +V AKNRR ++ +
Sbjct: 235 EKQLAKLGVKS--IDAKAFGFAKLAVPTKANTKEAKNRRVEIYFE 277
>gi|325474220|gb|EGC77408.1| OmpA family protein [Treponema denticola F0402]
Length = 167
Score = 50.2 bits (118), Expect = 8e-05, Method: Composition-based stats.
Identities = 34/149 (22%), Positives = 61/149 (40%), Gaps = 11/149 (7%)
Query: 14 TMMSI-SGIDNLDTKISSPDTVLNESSLQEQFSSSVGD--------SVFFDTSSYSIRPA 64
M S S + K + P+ + ++E+ + +V+F SY
Sbjct: 15 FMFSCKSAPKQKEEKPAEPEKTQEQEVVKEETDKKANEKNMSDDYYTVYFAPQSYQTDQF 74
Query: 65 DIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASR 122
Q+L +G L+ + +I GH+ +L S+ + L+RA AV +YF + A+
Sbjct: 75 TAQILKEIGEDLKAKNVKKIVIYGHSAKLDSQKDEDRIALQRAIAVASYFQKMKLFDANN 134
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ V G P+ + KNRR +
Sbjct: 135 IIVEGKGAREPARSHSEITDRFKNRRVEI 163
>gi|182679602|ref|YP_001833748.1| OmpA/MotB domain-containing protein [Beijerinckia indica subsp.
indica ATCC 9039]
gi|182635485|gb|ACB96259.1| OmpA/MotB domain protein [Beijerinckia indica subsp. indica ATCC
9039]
Length = 416
Score = 50.2 bits (118), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/142 (14%), Positives = 49/142 (34%), Gaps = 9/142 (6%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ ++ S E ++ D V F S + +Q++ + L+ H
Sbjct: 276 QKKISAAPSTPIIEVESTSEGVLLNLTDDVTYSMFAVGSSEPQKQTVQIMEKVAGILKSH 335
Query: 80 DCDFLIEGHADELGSR---NSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSV 135
+ +I G+ D + + L RA + G+ R++ + Y
Sbjct: 336 TGNVIIRGYTDGRPYKDGVYDNWRLSTSRALMAQYMLIRGGLDPKRVEHIEGYADRHL-- 393
Query: 136 YGHDEDAYAKNRRAIVFLKGCR 157
++ + NRR + ++ +
Sbjct: 394 KNSEDPNASVNRRIEILVRKEK 415
>gi|299136066|ref|ZP_07029250.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX8]
gi|298602190|gb|EFI58344.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX8]
Length = 269
Score = 50.2 bits (118), Expect = 8e-05, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 53/148 (35%), Gaps = 4/148 (2%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVL-SNLGS 74
++++ D K + ++L + +V F ++ D L + S
Sbjct: 122 LAVTTADTATNKQAIGQANQRFTTLDQYEDKG-SITVNFANGKATVSKKDKDQLTDFVKS 180
Query: 75 WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASR--MKVTSYGKEM 132
++G+A +GS + L RA AV G+ + + G
Sbjct: 181 AANTPGYMIEVQGYASAVGSAALNQRLSSERADAVLAIIQQTGVVPMTRILAPAAMGTTN 240
Query: 133 PSVYGHDEDAYAKNRRAIVFLKGCRANT 160
P H A+A+NRR +V + + T
Sbjct: 241 PVSEDHTRSAHAQNRRVVVTIVVNKGIT 268
>gi|218462138|ref|ZP_03502229.1| hypothetical conserved membrane protein [Rhizobium etli Kim 5]
Length = 386
Score = 50.2 bits (118), Expect = 8e-05, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 44/123 (35%), Gaps = 8/123 (6%)
Query: 36 NESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF---LIEGHADEL 92
NE++ F ++ + + +++++ + L+++ I GH D +
Sbjct: 220 NENASSVTLLLQSSTPELFQSARPELTKSFEPLVASIAAVLKQNAELIGGITITGHTDNV 279
Query: 93 G-----SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+++ L RA + + A G+ ++K P + A NR
Sbjct: 280 PLQASNPLSNNQRLSEARAATIASLLAASGVPTGQLKSQGRAATQPLAGNDSREGRAANR 339
Query: 148 RAI 150
R
Sbjct: 340 RIE 342
>gi|187918154|ref|YP_001883717.1| flagellar motor protein MotB [Borrelia hermsii DAH]
gi|119861002|gb|AAX16797.1| chemotaxis MotB protein [Borrelia hermsii DAH]
Length = 262
Score = 50.2 bits (118), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 43/128 (33%), Gaps = 15/128 (11%)
Query: 41 QEQFSSSVGDSVFFDTSSYS----IRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRN 96
+ S+ FFD++S IQ +++ +L+ +F IEGH D +
Sbjct: 121 ERGVVVSLLADAFFDSASAEVKLDDNRETIQKIASFIGFLDNQSYNFKIEGHTDNVDVNI 180
Query: 97 SSIALGLRRAYAVFNYFV-----------ARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ I + + S+ +V+ + P + A
Sbjct: 181 NGIWKSNWELSSARAVNMLEQILNYTDQSKIQSIESKFEVSGFAGSKPVATDDTPEGRAY 240
Query: 146 NRRAIVFL 153
NRR + +
Sbjct: 241 NRRIDILI 248
>gi|153006367|ref|YP_001380692.1| OmpA/MotB domain-containing protein [Anaeromyxobacter sp. Fw109-5]
gi|152029940|gb|ABS27708.1| OmpA/MotB domain protein [Anaeromyxobacter sp. Fw109-5]
Length = 307
Score = 50.2 bits (118), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 44/125 (35%), Gaps = 9/125 (7%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGS-- 94
S + + + D + FD SI +VLS + D + GH D+L
Sbjct: 141 SQEKGRIKVDMVDEILFDVGDSSISAQGAEVLSRVGAVLARMSDKHIQVSGHTDDLPISK 200
Query: 95 -----RNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
++ L RA V + R R+ ++ + P G A+NRR
Sbjct: 201 RLVERFPTNWELSAARAITVVRFLEERAGVPGRRLVGAAHSQYDPISTGKTAKERARNRR 260
Query: 149 AIVFL 153
+ L
Sbjct: 261 IEILL 265
>gi|330994155|ref|ZP_08318083.1| Outer membrane protein [Gluconacetobacter sp. SXCC-1]
gi|329758622|gb|EGG75138.1| Outer membrane protein [Gluconacetobacter sp. SXCC-1]
Length = 411
Score = 50.2 bits (118), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 37/109 (33%), Gaps = 7/109 (6%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADE------LGSRNSSIALGLR 104
VFFD + +++ + G+ D + + AL L+
Sbjct: 302 VFFDWDRSDLTDRARAIVAVAAQASTNTQTTRIEVNGYTDNSAARPGPQGEHYNQALSLK 361
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA + V G+ + + YG P V A+NRR + L
Sbjct: 362 RAQVIKAELVRDGVPGPAIDIHGYGDANPLVQTGANTREAQNRRVEIIL 410
>gi|222086232|ref|YP_002544764.1| outer membrane protein [Agrobacterium radiobacter K84]
gi|221723680|gb|ACM26836.1| outer membrane protein [Agrobacterium radiobacter K84]
Length = 838
Score = 50.2 bits (118), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 44/108 (40%), Gaps = 8/108 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGS-----WLEKHDCDFLIEGHADELGSRNSSIALGLR 104
D++ F T S I + L + + FLIEGH D +GS S++ L +
Sbjct: 719 DTITFATGSAEIPMSQASTLRGVADAIGQIIKKDPTETFLIEGHTDAVGSAESNLILSDQ 778
Query: 105 RAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA +V G+ + YG++ V + +NRR +
Sbjct: 779 RAESVAKVLSDVYGVPPENLVAQGYGEQYLKVNTQGPE--QENRRVTI 824
>gi|149178718|ref|ZP_01857301.1| hypothetical protein PM8797T_01394 [Planctomyces maris DSM 8797]
gi|148842416|gb|EDL56796.1| hypothetical protein PM8797T_01394 [Planctomyces maris DSM 8797]
Length = 242
Score = 50.2 bits (118), Expect = 9e-05, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 43/126 (34%), Gaps = 5/126 (3%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ ++G + F S + P Q L + L ++ GHA
Sbjct: 104 PNKTVERINTGTEVTLGGAACFGRFSAELTPEIKQKLDIIAEILLPTPNRLIVRGHASPE 163
Query: 93 G-----SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
S L RA V Y ++GI R+ V+S G P + + NR
Sbjct: 164 PLPKDSKFLDSQELSFYRAKNVAEYLESKGIEPERLIVSSVGDAEPRTITRNPEEQYLNR 223
Query: 148 RAIVFL 153
R VFL
Sbjct: 224 RVDVFL 229
>gi|34558375|ref|NP_908190.1| putative flagellar motor protein [Wolinella succinogenes DSM 1740]
gi|34484094|emb|CAE11090.1| HYPOTHETICAL PROTEIN-PUTATIVE FLAGELLAR MOTOR PROTEIN [Wolinella
succinogenes]
Length = 261
Score = 50.2 bits (118), Expect = 9e-05, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 44/144 (30%), Gaps = 7/144 (4%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVL---SNLGSWLEKHD 80
+ + S E F + ++ F + +D + D
Sbjct: 103 QEMAKVAEGPSSAVGSGSEGFIVRLPAALLFKEGGIEVENSDGFLFVKRMAEIVNRLPKD 162
Query: 81 CDFLIEGHADE----LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+ GH D + + L +RA +V V GI R+ G + P +
Sbjct: 163 VHVEVRGHTDTLPLPAQAPQDKLELTAKRALSVSKLLVKEGIDPKRITTVGRGDQDPLTH 222
Query: 137 GHDEDAYAKNRRAIVFLKGCRANT 160
+A NRR ++L T
Sbjct: 223 ARTPEAQESNRRVDIYLYPKETQT 246
>gi|149377601|ref|ZP_01895340.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Marinobacter algicola DG893]
gi|149358143|gb|EDM46626.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Marinobacter algicola DG893]
Length = 148
Score = 50.2 bits (118), Expect = 9e-05, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 41/102 (40%), Gaps = 4/102 (3%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAV 109
+ + + + D+ +L +L + I GHAD G + L RA +
Sbjct: 39 RFHYGFNKHRLDEQDLAILRQHALYLRHNPGVTVRIHGHADNFGVSEYNHFLSRLRASSA 98
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ G+ S++ V+ +G + P + +A NRR +
Sbjct: 99 AKVLIREGVRESQVLVSGWGSDRPLAR---PEDHAANRRLEL 137
>gi|197337853|ref|YP_002158755.1| outer membrane protein [Vibrio fischeri MJ11]
gi|197315105|gb|ACH64554.1| outer membrane protein [Vibrio fischeri MJ11]
Length = 322
Score = 50.2 bits (118), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 45/127 (35%), Gaps = 7/127 (5%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV--LSNLGSWLEKHDCDFLIEG 87
P + E ++ F+ Q + L +++ I G
Sbjct: 190 EPKPETIVKLVPEATYYPEQVTLHFEFGESRFVVESKQWHSWNELALSVKQGQGKVSITG 249
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH---DEDAYA 144
+ D G+ +++ LRRA + + G+ R+ + S G P V +E A
Sbjct: 250 YTDAKGTDSANDIESLRRATYAADMLIKAGVDEERILINSKGSADPLVNEDLMRNES--A 307
Query: 145 KNRRAIV 151
NRR ++
Sbjct: 308 LNRRVVI 314
>gi|153875209|ref|ZP_02003108.1| conserved hypothetical protein [Beggiatoa sp. PS]
gi|152068328|gb|EDN66893.1| conserved hypothetical protein [Beggiatoa sp. PS]
Length = 295
Score = 50.2 bits (118), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 36/102 (35%), Gaps = 2/102 (1%)
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
+ + L + + ++++ F I GH G+ + L L RA V A
Sbjct: 192 DDAGLIKEYMAWLQMIAQYFQENNQCFQIAGHCSRTGTATYNDKLSLSRALTVQKLMQAY 251
Query: 117 -GISASRMKVTSYGK-EMPSVYGHDEDAYAKNRRAIVFLKGC 156
R V G E G D+ A +RR + + C
Sbjct: 252 LPDIMQRTTVVGKGFRENLVGIGTDDARDAIDRRVEILVMNC 293
>gi|225024677|ref|ZP_03713869.1| hypothetical protein EIKCOROL_01559 [Eikenella corrodens ATCC
23834]
gi|224942566|gb|EEG23775.1| hypothetical protein EIKCOROL_01559 [Eikenella corrodens ATCC
23834]
Length = 230
Score = 50.2 bits (118), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 45/125 (36%), Gaps = 8/125 (6%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGH 88
+ + S+ + F +++RP L L L + +EG+
Sbjct: 77 QAEAPAPAEPQVREELVSLSSNFLFGFDKFNLRPEARTTLDELAQRLSGSNVQSVRVEGN 136
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA--KN 146
D +GS + L RRA V Y V RG+ A ++ G+ + E +N
Sbjct: 137 TDFMGSDAYNQRLSERRANTVSEYLVGRGVPAEKISAVGLGESQAKM---TEQCQQEVRN 193
Query: 147 --RRA 149
RR
Sbjct: 194 LGRRV 198
>gi|188995160|ref|YP_001929412.1| putative OmpA family protein [Porphyromonas gingivalis ATCC 33277]
gi|188594840|dbj|BAG33815.1| putative OmpA family protein [Porphyromonas gingivalis ATCC 33277]
Length = 672
Score = 50.2 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 48/132 (36%), Gaps = 28/132 (21%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
++ +D ++RP ++ L L + D + HAD G ++ L RRA +
Sbjct: 535 QNILYDFDKATLRPESMKSLDELIRILTDNPDIRIELGSHADRKGPDAYNLGLSDRRAKS 594
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGH---------------DED------------ 141
V +Y +RGI+A R+ YGK +P E+
Sbjct: 595 VVDYLTSRGIAADRLTWKGYGKSVPKTVTAKIAERHDFLKEGDVLTEEFVAPLTEEQQSV 654
Query: 142 AYAKNRRAIVFL 153
NRR +
Sbjct: 655 CDQLNRRTEFRV 666
>gi|332665208|ref|YP_004447996.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332334022|gb|AEE51123.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 291
Score = 50.2 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 44/129 (34%), Gaps = 6/129 (4%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTS-SYSIRPADIQVLSNLGSWLEKHDCD-FLIEGH 88
P + + ++ +S+ F + S I P L +G+ L + + GH
Sbjct: 145 PVAQYSVEVRNGKIVLALTESLLFKSGVSNRIEPNGQAALKAIGTLLNANPVLLIQVLGH 204
Query: 89 ADELGSRNSS---IALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYA 144
D + + RA V + A+R+ G+ P + +
Sbjct: 205 TDNQAASRKNLDSWDFTSLRAATVVRSLIDTHDLGANRVISGGRGEFDPITSNETSEGQS 264
Query: 145 KNRRAIVFL 153
+NRR + L
Sbjct: 265 RNRRVELSL 273
>gi|149911217|ref|ZP_01899841.1| putative outer membrane protein OmpA [Moritella sp. PE36]
gi|149805744|gb|EDM65742.1| putative outer membrane protein OmpA [Moritella sp. PE36]
Length = 327
Score = 50.2 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 41/108 (37%), Gaps = 1/108 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRR 105
+ ++ FD + + + + + + G+AD G+ ++ L R
Sbjct: 209 ETFSFAIIFDFAKSEVLLKNDLQ-QVVTRLNKHPQATVELTGYADAKGTEAFNLTLSKAR 267
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V +Y + +G+ A ++ G+ P + ++ NR V L
Sbjct: 268 VKHVSDYLIEQGVKAEQITEHHLGEAEPVIGNDTDEHRHLNRHVQVLL 315
>gi|148974875|ref|ZP_01811855.1| outer membrane protein [Vibrionales bacterium SWAT-3]
gi|145965384|gb|EDK30633.1| outer membrane protein [Vibrionales bacterium SWAT-3]
Length = 180
Score = 50.2 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 49/128 (38%), Gaps = 7/128 (5%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+I++ D V + + +V+ + + L IE
Sbjct: 59 QIAAQDDVCFYDKATQSLVLNYPINVYKL-------DESHKQVLEQYLSLVDDKSKIFIE 111
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
GHAD LGS + + AL RRA V +Y SR+ +YG+ P D N
Sbjct: 112 GHADSLGSESYNKALSSRRAGQVTSYLKEDLRQGSRIVEYAYGESAPICKAADNKVTGCN 171
Query: 147 RRAIVFLK 154
RR ++ +K
Sbjct: 172 RRVVITVK 179
>gi|225010858|ref|ZP_03701326.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-3C]
gi|225005066|gb|EEG43020.1| OmpA/MotB domain protein [Flavobacteria bacterium MS024-3C]
Length = 277
Score = 50.2 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 60/146 (41%), Gaps = 12/146 (8%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFS-SSVGDSVFFDTSSYSIRPADIQVLSNLG 73
++++ + +L + + D E S+++ S+ D + F+T SY + VL +
Sbjct: 116 SVNLALVQSLKGVLGNLDDEDIEISVEKGVVFVSISDKLLFNTGSYVVSNKAKSVLEKVA 175
Query: 74 SW-LEKHDCDFLIEGHADELGSRN----SSIALGLRRAYAVFNYFVARG-ISASRMKVTS 127
K D +F++EGH DE + L ++RA +V + RM
Sbjct: 176 KVVNNKPDFEFMVEGHTDERSFSKGDLVDNWDLSVKRATSVVRMLQKDFGVDPKRMTAAG 235
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ MP +KNRR + +
Sbjct: 236 RAEYMPVSSE-----LSKNRRTRIVV 256
>gi|257453916|ref|ZP_05619193.1| inner membrane lipoprotein YiaD [Enhydrobacter aerosaccus SK60]
gi|257448688|gb|EEV23654.1| inner membrane lipoprotein YiaD [Enhydrobacter aerosaccus SK60]
Length = 216
Score = 50.2 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 53/133 (39%), Gaps = 6/133 (4%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-D 80
L + + + + + S+ +++ F +I P L + + L +
Sbjct: 82 AKLRAETAGSGVTVTRDPVTNNINLSIPEAITFRVGDSTILPNFYNTLDKVATTLRDYNQ 141
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ + G+A G N + AL RRA AV NY V RGIS +R+ G
Sbjct: 142 TNIQVNGYASVEGDANRNQALSQRRASAVANYLVNRGISGNRISAIGRG-----ATTQFG 196
Query: 141 DAYAKNRRAIVFL 153
+Y NRR + +
Sbjct: 197 SSYEPNRRVEMII 209
>gi|170749438|ref|YP_001755698.1| OmpA/MotB domain-containing protein [Methylobacterium radiotolerans
JCM 2831]
gi|170655960|gb|ACB25015.1| OmpA/MotB domain protein [Methylobacterium radiotolerans JCM 2831]
Length = 269
Score = 50.2 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 52/138 (37%), Gaps = 6/138 (4%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
G + + +++ + +V +VFF S + P L LG L
Sbjct: 86 GDPGAPARPLTISPDDGGPAVRVVPARAVDLTVFFAYDSARLTPEARIQLEPLGEALRAQ 145
Query: 80 DCD---FLIEGHADELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSV 135
FLI GH D G R + L L RA AV + G++ R++V +G P
Sbjct: 146 PLAGHAFLIAGHTDAAGGRAYNRRLSLARARAVKAHLVETYGLAPERLRVHGWGPARPKD 205
Query: 136 YGHDEDAYAKNRRAIVFL 153
+ NRR V L
Sbjct: 206 P-DAPLSR-VNRRVEVSL 221
>gi|261251271|ref|ZP_05943845.1| hypothetical protein VIA_001290 [Vibrio orientalis CIP 102891]
gi|260938144|gb|EEX94132.1| hypothetical protein VIA_001290 [Vibrio orientalis CIP 102891]
Length = 188
Score = 50.2 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 41/101 (40%), Gaps = 1/101 (0%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYF 113
+ Y + P QVL + IEGHAD LG + AL RRA V Y
Sbjct: 88 YGIDIYKLSPNHKQVLEQYLGLVNN-TAKIYIEGHADSLGGEGYNKALSARRAKQVAKYL 146
Query: 114 VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ +R+ +YG+ P A NRR ++ +K
Sbjct: 147 KSDLKQGNRIVEHAYGESSPICNLEQNSATGCNRRVVITIK 187
>gi|227822263|ref|YP_002826234.1| OmpA family protein [Sinorhizobium fredii NGR234]
gi|227341263|gb|ACP25481.1| OmpA family protein [Sinorhizobium fredii NGR234]
Length = 758
Score = 50.2 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 8/126 (6%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-----EKHDCDFLIE 86
D V N + L+++ D++ F T S + + + L N+ + + F IE
Sbjct: 622 DEVRNSARLRDKVRRIDLDTIEFATGSAEVSMSQAKTLRNVADAMSKVLEKDPGETFFIE 681
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
GH D +GS S++ L RA +V G+ A + YG+ + +A +
Sbjct: 682 GHTDAVGSDRSNLVLSDERAESVAVLLTEVYGVPAENLVTQGYGERFLKI--RTPEAEQE 739
Query: 146 NRRAIV 151
NRR +
Sbjct: 740 NRRVTI 745
>gi|93005426|ref|YP_579863.1| OmpA/MotB [Psychrobacter cryohalolentis K5]
gi|92393104|gb|ABE74379.1| OmpA/MotB [Psychrobacter cryohalolentis K5]
Length = 218
Score = 50.2 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/189 (15%), Positives = 56/189 (29%), Gaps = 40/189 (21%)
Query: 1 MQYSTIFIILSAITMMSISGIDNL-----DTKISSPDTVLNESSLQEQ------------ 43
M+ + ++ + +++S D +++P +L S +
Sbjct: 1 MKAILYLVSITLCSSLALSACQTAPKLAIDNIVTAPMPILMVSLDSDGDGYSDEIDLCPG 60
Query: 44 ------------------FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD---CD 82
+ FF S + L + L+++
Sbjct: 61 TPRNIVTDERGCPFTGMGIGLKMEYRAFFAKGSSELSKEYQLELDTVALKLQEYYTATMR 120
Query: 83 FLIEGHADEL-GSRNSSIALGLRRAYAVFNYFV-ARGISASRMKVTSYGKEMPSVYGHDE 140
DE+ ++ +L RA V NY V I R+ +Y E P E
Sbjct: 121 IEGHASVDEMSDTKLRPNSLARNRALIVKNYLVLKHKIDPERLNTFNYDAEQPITSSDTE 180
Query: 141 DAYAKNRRA 149
+ + NRR
Sbjct: 181 EGKSMNRRV 189
>gi|296238955|gb|ADH01478.1| OmpA family protein [Pseudomonas sp. 2663]
Length = 535
Score = 50.2 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/151 (15%), Positives = 41/151 (27%), Gaps = 14/151 (9%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
++++ + L + + FD +R + + LG+
Sbjct: 343 TINLAETLPPPLPQLLSEGWLTAYKHPQGWLLVFRSDGAFDVGKAQVRTDFERNIERLGA 402
Query: 75 WLEKHDCDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVAR----------GISA 120
D + GH D ++ AL RA V +
Sbjct: 403 AFAPWPGDLEVIGHTDRQPIRTSEFGNNQALSEARARTVADELRRTALPGGAQAPGNAVQ 462
Query: 121 SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ + G P AY +NRR V
Sbjct: 463 RNIGFSGRGDTQPIDSAQTPAAYERNRRVDV 493
>gi|311280760|ref|YP_003942991.1| SmpA/OmlA domain-containing protein [Enterobacter cloacae SCF1]
gi|308749955|gb|ADO49707.1| SmpA/OmlA domain-containing protein [Enterobacter cloacae SCF1]
Length = 265
Score = 50.2 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 49/130 (37%), Gaps = 9/130 (6%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC---DFLIEGHA 89
T + S+ F S ++ L + + +++ LI GHA
Sbjct: 134 TAPKVKTAPHSIDSTFAAESLFGFGSATLSRTGETELRRMIAQIQEQHIPVKRVLITGHA 193
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE------DAY 143
D +G+ + AL L RA AV VA+GI + ++ G P V E
Sbjct: 194 DRIGNSEKNNALSLARAEAVKTLLVAQGIPEALVETRGVGASQPLVVCPGETTPAVVACL 253
Query: 144 AKNRRAIVFL 153
KNRR + +
Sbjct: 254 EKNRRITINI 263
>gi|255263090|ref|ZP_05342432.1| OmpA domain protein [Thalassiobium sp. R2A62]
gi|255105425|gb|EET48099.1| OmpA domain protein [Thalassiobium sp. R2A62]
Length = 521
Score = 50.2 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 30/80 (37%), Gaps = 4/80 (5%)
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY----FVARGISASRMKVTSYGKEMP 133
D + G +D G + + L RA AV +S ++ ++G+ +P
Sbjct: 437 HRDQRLIFVGFSDARGPASENRKLSSARAEAVQRRVNVALGETELSDFTLETEAFGEALP 496
Query: 134 SVYGHDEDAYAKNRRAIVFL 153
E NRR V++
Sbjct: 497 MACDDTEWGRQVNRRVEVWV 516
>gi|251733523|emb|CAR82511.1| pal [Ensifer adhaerens]
gi|251733525|emb|CAR82512.1| pal [Ensifer adhaerens]
gi|251733527|emb|CAR82513.1| pal [Ensifer adhaerens]
Length = 87
Score = 49.8 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 56 TSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
T S SIR Q L+ W + + IEGHADE G+R ++ALG RRA + +Y +
Sbjct: 1 TDSTSIRADAQQTLARQAQWLAKYPNYAITIEGHADERGTREYNLALGARRAASTRDYLI 60
Query: 115 ARGISASRMKVTSYGKEMPSVYGHD 139
++G+ ++RMK SYGKE P D
Sbjct: 61 SQGVPSNRMKTISYGKEKPVAVCDD 85
>gi|300716387|ref|YP_003741190.1| outer membrane protein [Erwinia billingiae Eb661]
gi|299062223|emb|CAX59340.1| predicted outer membrane protein [Erwinia billingiae Eb661]
Length = 294
Score = 49.8 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 45/136 (33%), Gaps = 12/136 (8%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQ------VLSNLGSWLEKHDCDFL 84
V + E + V F Q L +
Sbjct: 156 ASAVQSCQLQPEYKEYVLSGDVLFKFGKSMRHDMTPQGRQAVGKLIGQLHEDHVNLDSIE 215
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP-SVYGHD---- 139
+ GH D +G +S+ ALG RRA V + G+ A+ ++ TS G P
Sbjct: 216 VIGHTDPIGKESSNYALGARRASTVREMLIDGGLPAANIQATSAGSSQPLVASCSGSRQA 275
Query: 140 -EDAYAKNRRAIVFLK 154
YA +RR +V +K
Sbjct: 276 QAACYAPDRRVVVRVK 291
>gi|190892104|ref|YP_001978646.1| outer membrane protein, OmpA family [Rhizobium etli CIAT 652]
gi|190697383|gb|ACE91468.1| putative outer membrane protein, OmpA family [Rhizobium etli CIAT
652]
Length = 722
Score = 49.8 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 8/108 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWL-----EKHDCDFLIEGHADELGSRNSSIALGLR 104
D++ F T S I + L + + + FLIEGH D +GS S++ L +
Sbjct: 603 DTITFATGSAEIPMTQARTLRKVADAISQVLKKDPSETFLIEGHTDAVGSDQSNLVLSDQ 662
Query: 105 RAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA +V N GI M YG+ V + +NRR +
Sbjct: 663 RAESVANVLSDVYGIPPENMATQGYGERYLKVNTAGPE--QENRRVTI 708
>gi|329964410|ref|ZP_08301491.1| OmpA family protein [Bacteroides fluxus YIT 12057]
gi|328525459|gb|EGF52507.1| OmpA family protein [Bacteroides fluxus YIT 12057]
Length = 252
Score = 49.8 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 53/134 (39%), Gaps = 7/134 (5%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ + + + V + + L S + F +S ++ L L L++
Sbjct: 108 AAEAAKIEGAQVEQVTDNNGLPA-VKVSFAAGILFAFNSSALSNEAKSSLRELAQILKED 166
Query: 80 DCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYG 137
I GH D++G+ +++ + RAY+V NY G+S ++ K V G
Sbjct: 167 PTTDIAIIGHTDKVGTYEANMKVSKNRAYSVENYLQDCGVSPAQFKKVEGVGYTE-YDDN 225
Query: 138 HDEDAYAKNRRAIV 151
D +NRR +
Sbjct: 226 LSAD---QNRRVEI 236
>gi|85859043|ref|YP_461245.1| chemotaxis protein [Syntrophus aciditrophicus SB]
gi|85722134|gb|ABC77077.1| chemotaxis protein [Syntrophus aciditrophicus SB]
Length = 254
Score = 49.8 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 48/138 (34%), Gaps = 9/138 (6%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDS---VFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+D K+ + + S + + D + F S ++L + L+
Sbjct: 115 AIDEKLQTLKDQVMVSIVDNGLKIQIVDKEGSLMFPLGSAEPTFKAKEILRIVSENLKDS 174
Query: 80 DCDFLIEGHADELGS---RNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSV 135
++EGH D + ++ L RA A I R+ +V Y + +
Sbjct: 175 PNRIIVEGHTDAAPFRSAQTTNWELSTARASAARRELENNSIDPGRIARVIGYADQELFI 234
Query: 136 YGHDEDAYAKNRRAIVFL 153
+ DA NRR + +
Sbjct: 235 PQNPMDAR--NRRISIIV 250
>gi|251733531|emb|CAR82515.1| pal [Ensifer adhaerens]
gi|251733533|emb|CAR82516.1| pal [Ensifer adhaerens]
gi|251733535|emb|CAR82517.1| pal [Ensifer adhaerens]
Length = 87
Score = 49.8 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 56 TSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
T S SIR Q L+ W + + IEGHADE G+R ++ALG RRA + +Y +
Sbjct: 1 TDSTSIRADAQQTLARQAQWLAKYPNYAITIEGHADERGTREYNLALGARRAASTRDYLI 60
Query: 115 ARGISASRMKVTSYGKEMPSVYGHD 139
++G+ A+RMK SYGKE P D
Sbjct: 61 SQGVPANRMKTISYGKEKPVAVCDD 85
>gi|118578704|ref|YP_899954.1| OmpA/MotB domain-containing protein [Pelobacter propionicus DSM
2379]
gi|118501414|gb|ABK97896.1| OmpA/MotB domain protein [Pelobacter propionicus DSM 2379]
Length = 201
Score = 49.8 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/150 (20%), Positives = 61/150 (40%), Gaps = 10/150 (6%)
Query: 5 TIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSS--VGDSVFFDTSSYSIR 62
+ +L A+ +++ + T+ +S + + ++ ++ + +V F S S+
Sbjct: 53 SKLSLLPAVANVAVRMSSPVATQPASAPIDVTAVAPNKEQVATKRLIGTVHFRFDSSSLS 112
Query: 63 PADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASR 122
AD+ L L + + GH +G+ + + L RRA AV ARG++
Sbjct: 113 HADLGGLDKLSKEI-FAGSTVDLTGHTCTIGTDDYNKKLSFRRAEAVATALKARGVNIG- 170
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ GK P+ +NRR +
Sbjct: 171 -TIEGRGKCCPAS-----QDKRQNRRVEII 194
>gi|294670501|ref|ZP_06735381.1| hypothetical protein NEIELOOT_02220 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307780|gb|EFE49023.1| hypothetical protein NEIELOOT_02220 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 271
Score = 49.8 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 56/146 (38%), Gaps = 21/146 (14%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGH 88
+ + S+ F+ ++RP I+ L++L + L + +EGH
Sbjct: 67 DAVAQAPAAPEYVDETVSLSAKTLFNFDKDNLRPQAIETLNSLAARLSDANVQAVRVEGH 126
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK--- 145
D +GS + AL RRA AV NY V +G+ A ++ G+ + E +K
Sbjct: 127 TDFMGSEQYNQALSERRANAVANYLVNQGVPAGKISAVGLGESQAQMTATCEAEVSKLGK 186
Query: 146 -----------------NRRAIVFLK 154
+RR V ++
Sbjct: 187 KVSKAKKRAALIACIEPDRRVDVKIR 212
>gi|188584474|ref|YP_001927919.1| OmpA/MotB domain protein [Methylobacterium populi BJ001]
gi|179347972|gb|ACB83384.1| OmpA/MotB domain protein [Methylobacterium populi BJ001]
Length = 718
Score = 49.8 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 59/128 (46%), Gaps = 8/128 (6%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-----FL 84
+ D V L+ + S +++ FDT S+++ P + LS + + + D FL
Sbjct: 573 TLDQVRYSPQLRARMPSVDINTITFDTGSFTVTPDQAKRLSTIAEAINRTIKDNPQEVFL 632
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAY 143
IEG+ D +GS +++L RRA +V + YG++ V + ++A
Sbjct: 633 IEGYTDAVGSDIDNLSLSDRRAQSVAAVLTQNFQVPPENLTTQGYGEQYLKV--NTQEAN 690
Query: 144 AKNRRAIV 151
+NRR V
Sbjct: 691 RENRRVTV 698
>gi|328675516|gb|AEB28191.1| 18K peptidoglycan-associated outer membrane lipoprotein;
Peptidoglycan-associated lipoprotein precursor; Outer
membrane protein P6; OmpA/MotB precursor [Francisella
cf. novicida 3523]
Length = 209
Score = 49.8 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 69/190 (36%), Gaps = 39/190 (20%)
Query: 1 MQYSTI--FIILSAITMMSISGIDNLDTKISSPDTVLN-------------ESSLQEQFS 45
M + I ++L++ + D + K + D+ S EQ
Sbjct: 7 MNLAVIGSMLMLASCSSTRPDNSDLIKDKYAGVDSSQALEMSSQIYGSDKMSSDQVEQMK 66
Query: 46 SSVGDS----VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIA 100
+ + V+F SY+I + L + + D + G+ D GS +
Sbjct: 67 KELMNINCRSVYFGFDSYNITDDAKECLDKTADYLIAHPDQPIKLSGNTDPRGSEKYNFN 126
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG-------------------HDED 141
LG +RA AV+NY + + ++ ++ V SYGK P+ E
Sbjct: 127 LGQKRAEAVYNYLLGKNVNKDQICVVSYGKLKPAAEPTQFYDEFCKDGVNDACMYKASEK 186
Query: 142 AYAKNRRAIV 151
A+ +RR +
Sbjct: 187 AFYLDRRTEI 196
>gi|262068311|ref|ZP_06027923.1| outer membrane protein [Fusobacterium periodonticum ATCC 33693]
gi|291377972|gb|EFE85490.1| outer membrane protein [Fusobacterium periodonticum ATCC 33693]
Length = 122
Score = 49.8 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ N + +E ++ FD ++P ++L+NL ++E+++ + +EGH D +
Sbjct: 17 DITNMEAPKEMTIVLDERALNFDFDKSVVKPQYFEMLNNLKDFIEQNNYEVTLEGHTDSI 76
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYG 137
GS +I L RRA AV + G++ R+ + + G+E P
Sbjct: 77 GSNQYNIGLSRRRAEAVKAKLIEFGLAEERIVGIEAKGEEYPVATN 122
>gi|163793054|ref|ZP_02187030.1| OmpA/MotB [alpha proteobacterium BAL199]
gi|159181700|gb|EDP66212.1| OmpA/MotB [alpha proteobacterium BAL199]
Length = 373
Score = 49.8 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 47/149 (31%), Gaps = 14/149 (9%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNL 72
+I ++S + S E + D F S S+ ++L +
Sbjct: 160 AAIKEAIEKSPELSDVAESIKVDSTPEGLRIQLIDQERIALFPNGSASMYEQTRKLLIKV 219
Query: 73 GSWLEKHDCDFLIEGHADELG----SRNSSIALGLRRAYAVFNYFVARGISASRM-KVTS 127
+ I GH D S ++ L RA A VA GI R+ +V
Sbjct: 220 AEVVAALPNKIEITGHTDSKQFHPGSTYTNWDLSSDRANASRRVMVANGIDEKRIDEVVG 279
Query: 128 YGKEMPSV--YGHDEDAYAKNRRAIVFLK 154
P V D NRR + LK
Sbjct: 280 KADRDPLVVEDPSDPT----NRRISIILK 304
>gi|163745061|ref|ZP_02152421.1| OmpA domain protein [Oceanibulbus indolifex HEL-45]
gi|161381879|gb|EDQ06288.1| OmpA domain protein [Oceanibulbus indolifex HEL-45]
Length = 519
Score = 49.8 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Query: 62 RPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS 121
+++Q L+ + + G +D G+ ++ + LRRA AV A ++A+
Sbjct: 423 SRSNVQQLARALEQGQYDARRLMFVGFSDGEGAARANREIALRRAEAVQRAVSAAAVTAN 482
Query: 122 ----RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
++V ++G+ MP E NRR V+++
Sbjct: 483 LSRIDLRVDAFGEAMPIACDDSEWGRQANRRVEVWVR 519
>gi|114797285|ref|YP_758982.1| putative chemotaxis MotB protein [Hyphomonas neptunium ATCC 15444]
gi|114737459|gb|ABI75584.1| putative chemotaxis MotB protein [Hyphomonas neptunium ATCC 15444]
Length = 287
Score = 49.8 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 37/106 (34%), Gaps = 7/106 (6%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR----NSSIALGLRRAYA 108
F +Q++ + + D D I GH D R + L RA A
Sbjct: 181 LFPLGRSEPSETMVQLIDVVAESFAEFDNDIKIVGHTDSHRYRNGAIYDNWNLSADRANA 240
Query: 109 VFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
I + R+ +V+ P V D A A+NRR + +
Sbjct: 241 ARRLLSRADIPSDRIREVSGKADTDPLVK-DDPQA-AQNRRISITI 284
>gi|53728845|ref|ZP_00134888.2| COG2885: Outer membrane protein and related
peptidoglycan-associated (lipo)proteins [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
Length = 294
Score = 49.8 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 44/114 (38%), Gaps = 9/114 (7%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRR 105
++ FD ++ +V+ N+ + L+ + G+ D LGS ++ L RR
Sbjct: 149 NLSGDFLFDFDKDTLTAKGKEVVDNVAAQLKSSKAEQVKVAGYTDRLGSEKYNLDLSQRR 208
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD-------EDAYAKNRRAIVF 152
A V V +G++A + YGK +D NRR V
Sbjct: 209 ANMVKARLVQQGVTA-NINAVGYGKAQQVKACDGIPHGQELKDCLRPNRRVEVT 261
>gi|241205007|ref|YP_002976103.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240858897|gb|ACS56564.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 739
Score = 49.8 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 8/108 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWL-----EKHDCDFLIEGHADELGSRNSSIALGLR 104
D++ F T S I + L + + + FLIEGH D +GS S++ L +
Sbjct: 620 DTITFATGSADIPMTQARTLRKVADAISQVLEKDPSETFLIEGHTDAVGSDQSNLILSDQ 679
Query: 105 RAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA +V N GI+ + YG+ V + +NRR +
Sbjct: 680 RAESVANVLSDVYGIAPENLATQGYGESYLKVNTSAPE--QENRRVTI 725
>gi|229588858|ref|YP_002870977.1| hypothetical protein PFLU1327 [Pseudomonas fluorescens SBW25]
gi|229360724|emb|CAY47582.1| putative outer membrane protein [Pseudomonas fluorescens SBW25]
Length = 381
Score = 49.8 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 30/69 (43%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
L+ GH D G+ +S AL RA ++ + F G+ R+ + G MP
Sbjct: 227 VLVLGHVDATGTAPASQALTKERAQSIASIFSLSGLKQDRLMLRGMGDLMPRAANDSNQG 286
Query: 143 YAKNRRAIV 151
A NRR +
Sbjct: 287 RALNRRMEI 295
>gi|323528823|ref|YP_004230975.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1001]
gi|323385825|gb|ADX57915.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1001]
Length = 242
Score = 49.8 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/150 (22%), Positives = 58/150 (38%), Gaps = 13/150 (8%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIR---PADIQVLSNLGSW 75
G + + V +++ E F S+ F S PA L + +
Sbjct: 95 CGEAPSNKAPAETGAVAPQTATLENF--SLESDALFPFGKSSPESMLPAAKARLDEIAAR 152
Query: 76 LEKHD--CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
+ +H+ + GH D LG + + L L RA V +Y VA G+ S + G P
Sbjct: 153 IRQHEHVSAVTVVGHTDRLGPESINGPLSLARANTVRDYLVAHGLDGSIIHAKGVGSSEP 212
Query: 134 SVYGHDEDAYA------KNRRAIVFLKGCR 157
+ + DA A ++R + ++G +
Sbjct: 213 RTHCAEGDARALIACLQQDRYVSITVEGRK 242
>gi|167009214|ref|ZP_02274145.1| probable OmpA family protein [Francisella tularensis subsp.
holarctica FSC200]
Length = 206
Score = 49.8 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 69/190 (36%), Gaps = 39/190 (20%)
Query: 1 MQYSTI--FIILSAITMMSISGIDNLDTKISSPDTVLN-------------ESSLQEQFS 45
M + I ++L++ + D + K + D+ S EQ
Sbjct: 6 MNLAVIGSMLMLASCSSTRPDNSDLIKDKYAGVDSSQALEMSSQIYGSDKLSSDQVEQMK 65
Query: 46 SSVGDS----VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIA 100
+ + V+F SY+I + L + + D + G+ D GS +
Sbjct: 66 KELMNINCRSVYFGFDSYNIIDDAKECLDKTADYLIAHPDQPIKLSGNTDPRGSEKYNFN 125
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG-------------------HDED 141
LG +RA AV+NY + + ++ ++ V SYGK P+ E
Sbjct: 126 LGQKRAEAVYNYLLGKNVNKDQICVVSYGKLKPAAEPTQFYDEFCKDGVNDACMYKASEK 185
Query: 142 AYAKNRRAIV 151
A+ +RR +
Sbjct: 186 AFYLDRRTEI 195
>gi|251733469|emb|CAR82484.1| pal [Rhizobium tropici]
Length = 87
Score = 49.8 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/85 (43%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 56 TSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
T S SIR Q L W + +EGHADE G+R ++ALG RRA A +Y
Sbjct: 1 TDSSSIRADASQTLDRQAQWLARYPNYAITVEGHADERGTREYNLALGARRAAATKDYLA 60
Query: 115 ARGISASRMKVTSYGKEMPSVYGHD 139
+RG+ A RMK SYGKE P D
Sbjct: 61 SRGVPAQRMKTISYGKERPVATCDD 85
>gi|163794640|ref|ZP_02188610.1| OmpA/MotB [alpha proteobacterium BAL199]
gi|159179913|gb|EDP64438.1| OmpA/MotB [alpha proteobacterium BAL199]
Length = 215
Score = 49.8 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/140 (22%), Positives = 55/140 (39%), Gaps = 9/140 (6%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSS--VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
++ D L+ + FS + +V+F SS + + L+ +
Sbjct: 74 ATSQSVTVNDDALDAVPVAASFSGQPYLASTVYFGHSSARLTGTERAELAKVAQTAIASG 133
Query: 81 CDFLIEGHA-------DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
+ GHA D ++ + L+RA AV + + G+ A+R+++ + G P
Sbjct: 134 AAVRVIGHASARTADLDLRAHEVANFTMSLKRANAVADVLIHAGLPANRIRIDALGDSQP 193
Query: 134 SVYGHDEDAYAKNRRAIVFL 153
Y A NRR VFL
Sbjct: 194 EFYEVMPSGEAGNRRVEVFL 213
>gi|4105267|gb|AAD02332.1| flagellar motor rotation protein MotB [Campylobacter jejuni]
Length = 141
Score = 49.8 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/125 (22%), Positives = 43/125 (34%), Gaps = 6/125 (4%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSI-RPADIQVLSNLGS--WLEKHDCDFLIEGHADELGSR 95
Q + ++ V F+ S I L + I G+ D S
Sbjct: 2 QSDNQVALNLPSKVEFERGSAQIVSADIQDYLKRMAELTTYLPPQAKIEIRGYTDNSDSI 61
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
S L +RA V YF+ G + + + SYG P + A N R ++ K
Sbjct: 62 IRSYELAYQRAENVLKYFIEGGANLKNISIKSYGLNNPI--NGNPQALENN-RVEIYFKV 118
Query: 156 CRANT 160
A+T
Sbjct: 119 DTADT 123
>gi|21241580|ref|NP_641162.1| hypothetical protein XAC0810 [Xanthomonas axonopodis pv. citri str.
306]
gi|21106935|gb|AAM35698.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 51
Score = 49.8 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 7/35 (20%), Positives = 12/35 (34%), Gaps = 5/35 (14%)
Query: 125 VTSYGKEMPSVYG-----HDEDAYAKNRRAIVFLK 154
+G+ P + NRR +FL+
Sbjct: 16 AKGHGESQPVAPNTVNGQDNPGGRQLNRRVEIFLR 50
>gi|251733529|emb|CAR82514.1| pal [Ensifer adhaerens]
Length = 87
Score = 49.8 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 56 TSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
T S SIR Q L+ W + + IEGHADE G+R ++ALG RRA + +Y V
Sbjct: 1 TDSTSIRADAQQTLARQAQWLAKYPNYAITIEGHADERGTREYNLALGARRAASTRDYLV 60
Query: 115 ARGISASRMKVTSYGKEMPSVYGHD 139
++G+ A+RMK SYGKE P D
Sbjct: 61 SQGVPANRMKTISYGKEKPVAVCDD 85
>gi|213582299|ref|ZP_03364125.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 78
Score = 49.8 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 31/70 (44%), Gaps = 9/70 (12%)
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE---------DAYAKNR 147
+ L +RA +V +Y +++GI + ++ G+ P + D A +R
Sbjct: 1 YNQGLSEKRAQSVVDYLISKGIPSDKISARGMGESNPVTGNTCDNVKPRAALIDCLAPDR 60
Query: 148 RAIVFLKGCR 157
R + +KG +
Sbjct: 61 RVEIEVKGVK 70
>gi|312142930|ref|YP_003994376.1| OmpA/MotB domain protein [Halanaerobium sp. 'sapolanicus']
gi|311903581|gb|ADQ14022.1| OmpA/MotB domain protein [Halanaerobium sp. 'sapolanicus']
Length = 46
Score = 49.8 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 8/39 (20%), Positives = 14/39 (35%)
Query: 114 VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
I +R++ G P E+ +NRR +
Sbjct: 6 NNHNIDENRLQPYGVGPLAPQATNETEEGRQQNRRVELV 44
>gi|218507201|ref|ZP_03505079.1| putative outer membrane protein, OmpA family [Rhizobium etli Brasil
5]
Length = 208
Score = 49.8 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 8/108 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWL-----EKHDCDFLIEGHADELGSRNSSIALGLR 104
D++ F T S I + L + + + FLIEGH D +GS S++ L +
Sbjct: 89 DTITFATGSAEIPMTQARTLRKVADAISQVLKKDPSETFLIEGHTDAVGSDQSNLVLSDQ 148
Query: 105 RAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA +V N GI M YG+ V + +NRR +
Sbjct: 149 RAESVANVLSDVYGIPPENMATQGYGERYLKVNTAGPE--QENRRVTI 194
>gi|157375630|ref|YP_001474230.1| OmpA/MotB domain-containing protein [Shewanella sediminis HAW-EB3]
gi|157318004|gb|ABV37102.1| OmpA/MotB domain protein [Shewanella sediminis HAW-EB3]
Length = 245
Score = 49.8 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/122 (25%), Positives = 47/122 (38%), Gaps = 1/122 (0%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADE 91
L Q+ S+G +V F T S + P L + + + + G+AD
Sbjct: 113 AQLKAEDQQKLAELSLGLNVQFKTGSSELVPHFKLQLDEVAYAMSLSPELRLDLTGYADR 172
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
G + AL +R V Y V +GI SR+ +YG P + +RR V
Sbjct: 173 RGDSTYNQALSEQRVAEVKTYLVNQGIDESRLDFRAYGASAPMTEEQSFENDFFDRRVTV 232
Query: 152 FL 153
L
Sbjct: 233 KL 234
>gi|327396327|dbj|BAK13749.1| OmpA/MotB domain protein [Pantoea ananatis AJ13355]
Length = 287
Score = 49.4 bits (116), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 25/80 (31%), Gaps = 9/80 (11%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYF---------VARGISASRMKVTSYGKEMP 133
IEGH D G ++ L RA F S + V YGK P
Sbjct: 181 VQIEGHTDSKGEDVYNLNLSTNRAITTFTSMLAAAPDLVAHFNMRSQPVLSVAGYGKMRP 240
Query: 134 SVYGHDEDAYAKNRRAIVFL 153
A NRR + +
Sbjct: 241 VKPNDTPQNMAMNRRIDLRI 260
>gi|148982298|ref|ZP_01816702.1| Outer membrane protein [Vibrionales bacterium SWAT-3]
gi|145960547|gb|EDK25905.1| Outer membrane protein [Vibrionales bacterium SWAT-3]
Length = 205
Score = 49.4 bits (116), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 53/109 (48%), Gaps = 2/109 (1%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVF 110
+ F +S I PA + + + ++L++++ ++G+A ++G+ ++ L RA V
Sbjct: 85 ILFANNSTEINPAFLNQIRQMAAFLKRYESTTIELQGYASKVGNAEHNLMLSKERAANVR 144
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
++ GI SR+ + +G E +A +R+ + + G + N
Sbjct: 145 RALISNGIQPSRVNIVGHGDAE-FSSNDTEINHALHRKVVASVAGFKGN 192
>gi|304411391|ref|ZP_07393005.1| OmpA/MotB domain protein [Shewanella baltica OS183]
gi|307305287|ref|ZP_07585035.1| OmpA/MotB domain protein [Shewanella baltica BA175]
gi|304350246|gb|EFM14650.1| OmpA/MotB domain protein [Shewanella baltica OS183]
gi|306911590|gb|EFN42015.1| OmpA/MotB domain protein [Shewanella baltica BA175]
Length = 276
Score = 49.4 bits (116), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 63/148 (42%), Gaps = 3/148 (2%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQF--SSSVGDSVFFDTSSYSIRPADIQ 67
LS +++ + + + S Q Q ++G +V F T S + +
Sbjct: 117 LSELSVKQQNAEKRASEYAKAQQELDELLSAQRQLLSELALGLNVQFRTGSSEVESHFLP 176
Query: 68 VLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT 126
L ++ + + + ++G+AD G + + AL +R V Y + +G++A RM
Sbjct: 177 QLDDVAEVMNLSPELNLELKGYADRRGDVSYNQALSEQRLLEVRGYLIKQGVAAERMTTQ 236
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
++G P D ++ +RR + L+
Sbjct: 237 AFGALSPLQAEQDRESDVFDRRVTLTLQ 264
>gi|86157306|ref|YP_464091.1| OmpA/MotB family outer membrane protein [Anaeromyxobacter
dehalogenans 2CP-C]
gi|85773817|gb|ABC80654.1| outer membrane protein, OmpA/MotB family [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 170
Score = 49.4 bits (116), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 50/144 (34%), Gaps = 11/144 (7%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK--- 78
+ L + + + F T + + P Q + L + L
Sbjct: 26 AAKKAAGQATVGKLEKEINRRLLEEGRKNQCSFKTDNDQLEPGCDQKMKRLSNALVDAKK 85
Query: 79 -------HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
+ F++ GH D GS + L RRA + VARGI + ++ G +
Sbjct: 86 RLNGAGVKNFKFVVSGHTDTSGSAAHNQELSARRAAVIEKELVARGIPQAEIESVGMGSK 145
Query: 132 MPSV-YGHDEDAYAKNRRAIVFLK 154
P V AKNRR + ++
Sbjct: 146 KPLVKPDDTPAKKAKNRRYELQVR 169
>gi|169838279|ref|ZP_02871467.1| hypothetical protein cdivTM_14466 [candidate division TM7
single-cell isolate TM7a]
Length = 36
Score = 49.4 bits (116), Expect = 1e-04, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 11/31 (35%)
Query: 121 SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
++ G P E+ A NRR V
Sbjct: 2 WEIETKGNGDLNPVASNDTEEGRAANRRIEV 32
>gi|257094585|ref|YP_003168226.1| OmpA/MotB domain-containing protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257047109|gb|ACV36297.1| OmpA/MotB domain protein [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 184
Score = 49.4 bits (116), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 57/143 (39%), Gaps = 6/143 (4%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+ + + K + +ESSL ++ + F+T+S S+ P Q L +G
Sbjct: 40 LLSPEATVAPAARKTRAISVTRDESSLPAAKPAAASLLIIFETNSASLTPKGKQSLDVVG 99
Query: 74 ---SWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYG 129
+ + F IEGH+D G + ++ L RA +V Y + I +R+K G
Sbjct: 100 RALNSEKLTAYKFAIEGHSDPRGGEDYNLRLSQARAESVVGYLEQSHQIEPARLKPVGKG 159
Query: 130 KEMPSVYGHDEDAYAKNRRAIVF 152
E +NRR +
Sbjct: 160 PTQLLNPARPEA--PENRRVTIK 180
>gi|303250252|ref|ZP_07336452.1| lipoprotein [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|307252017|ref|ZP_07533917.1| hypothetical protein appser6_5360 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|302650868|gb|EFL81024.1| lipoprotein [Actinobacillus pleuropneumoniae serovar 6 str. Femo]
gi|306860486|gb|EFM92499.1| hypothetical protein appser6_5360 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 283
Score = 49.4 bits (116), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 44/114 (38%), Gaps = 9/114 (7%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRR 105
++ FD ++ +V+ N+ + L+ + G+ D LGS ++ L RR
Sbjct: 138 NLSGDFLFDFDKDTLTAKGKEVVDNVAAQLKSSKAEQVKVAGYTDRLGSEKYNLDLSQRR 197
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD-------EDAYAKNRRAIVF 152
A V V +G++A + YGK +D NRR V
Sbjct: 198 ANMVKARLVQQGVTA-NINAVGYGKAQQVKACDGIPHGQELKDCLRPNRRVEVT 250
>gi|197121340|ref|YP_002133291.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K]
gi|220916043|ref|YP_002491347.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
gi|196171189|gb|ACG72162.1| OmpA/MotB domain protein [Anaeromyxobacter sp. K]
gi|219953897|gb|ACL64281.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 170
Score = 49.4 bits (116), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 50/144 (34%), Gaps = 11/144 (7%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK--- 78
+ L + + + F T + + P Q + L + L
Sbjct: 26 AAKKAAGQATVGKLEKEINRRLLEEGRKNQCSFKTDTDQLEPGCDQKMKRLSNALVDAKK 85
Query: 79 -------HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
+ F++ GH D GS + L RRA + VARGI + ++ G +
Sbjct: 86 RLNGAGVKNFKFVVSGHTDTSGSAAHNQELSARRAAVIEKELVARGIPQAEIESVGMGSK 145
Query: 132 MPSV-YGHDEDAYAKNRRAIVFLK 154
P V AKNRR + +K
Sbjct: 146 KPLVKPDDTPAKKAKNRRYELQVK 169
>gi|257092162|ref|YP_003165803.1| OmpA/MotB domain-containing protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257044686|gb|ACV33874.1| OmpA/MotB domain protein [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 176
Score = 49.4 bits (116), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/157 (17%), Positives = 50/157 (31%), Gaps = 12/157 (7%)
Query: 8 IILSAITMM----------SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS 57
++LSA + + + ++P V + + V+F
Sbjct: 16 LVLSACATTDKAPPGDSGQAAAAREQPSRVPATPVRVGSAKAPTPFADDETRRVVYFAFG 75
Query: 58 SYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
I +L E + GH D LGS ++A+ +R AV + +
Sbjct: 76 ETMIDSESADILRQNAQKLKEDPQLVVTLVGHTDNLGSAAYNLAVADKRIEAVSDRLRSL 135
Query: 117 GISASRMKVTSYGKEMP-SVYGHDEDAYAKNRRAIVF 152
G+ S+++ G E E RR +
Sbjct: 136 GVPRSQIRRLPVGSEQSSKQACDSEACRRTMRRVELV 172
>gi|126207944|ref|YP_001053169.1| lipoprotein Plp4 [Actinobacillus pleuropneumoniae L20]
gi|165975919|ref|YP_001651512.1| lipoprotein [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
gi|190149806|ref|YP_001968331.1| lipoprotein Plp4 [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|307245299|ref|ZP_07527387.1| hypothetical protein appser1_5040 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307254248|ref|ZP_07536089.1| hypothetical protein appser9_4990 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307258710|ref|ZP_07540442.1| hypothetical protein appser11_5080 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|307260944|ref|ZP_07542627.1| hypothetical protein appser12_5120 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|307263126|ref|ZP_07544747.1| hypothetical protein appser13_5480 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|126096736|gb|ABN73564.1| lipoprotein Plp4 [Actinobacillus pleuropneumoniae serovar 5b str.
L20]
gi|165876020|gb|ABY69068.1| lipoprotein [Actinobacillus pleuropneumoniae serovar 3 str. JL03]
gi|189914937|gb|ACE61189.1| lipoprotein Plp4 [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|306853640|gb|EFM85857.1| hypothetical protein appser1_5040 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306862795|gb|EFM94748.1| hypothetical protein appser9_4990 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306867061|gb|EFM98917.1| hypothetical protein appser11_5080 [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306869356|gb|EFN01150.1| hypothetical protein appser12_5120 [Actinobacillus pleuropneumoniae
serovar 12 str. 1096]
gi|306871488|gb|EFN03211.1| hypothetical protein appser13_5480 [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 283
Score = 49.4 bits (116), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 44/114 (38%), Gaps = 9/114 (7%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRR 105
++ FD ++ +V+ N+ + L+ + G+ D LGS ++ L RR
Sbjct: 138 NLSGDFLFDFDKDTLTAKGKEVVDNVAAQLKSSKAEQVKVAGYTDRLGSEKYNLDLSQRR 197
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD-------EDAYAKNRRAIVF 152
A V V +G++A + YGK +D NRR V
Sbjct: 198 ANMVKARLVQQGVTA-NINAVGYGKAQQVKACDGIPHGQELKDCLRPNRRVEVT 250
>gi|91975492|ref|YP_568151.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
gi|91681948|gb|ABE38250.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
Length = 217
Score = 49.4 bits (116), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 57/146 (39%), Gaps = 6/146 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS 70
+A++ ++ + + S + + ++ + FD +S ++ P L
Sbjct: 64 AAVSPEELATVKRISQIRSLSAGDREQMAAIAAKRPAIDLEINFDYNSAALTPRAEPQLK 123
Query: 71 NLGSWLEKHDCD---FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVT 126
+LG L D ++ GH D G + + L RRA +V Y + R I +
Sbjct: 124 SLGDALISSDLKDSIVMLAGHTDAKGGDDYNQTLSERRAESVKRYLIDRYSIRPDHLVAV 183
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVF 152
YGK+ D A+NRR +
Sbjct: 184 GYGKKQ-LKDPSDPLG-AENRRVQIV 207
>gi|89255762|ref|YP_513124.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
holarctica LVS]
gi|115314256|ref|YP_762979.1| OmpA family protein [Francisella tularensis subsp. holarctica
OSU18]
gi|169656514|ref|YP_001427790.2| OmpA family peptidoglycan-associated lipoprotein [Francisella
tularensis subsp. holarctica FTNF002-00]
gi|254367132|ref|ZP_04983165.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
holarctica 257]
gi|89143593|emb|CAJ78776.1| Peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
holarctica LVS]
gi|115129155|gb|ABI82342.1| probable OmpA family protein [Francisella tularensis subsp.
holarctica OSU18]
gi|134252955|gb|EBA52049.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
holarctica 257]
gi|164551582|gb|ABU60834.2| peptidoglycan-associated lipoprotein, OmpA family [Francisella
tularensis subsp. holarctica FTNF002-00]
Length = 207
Score = 49.4 bits (116), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 69/190 (36%), Gaps = 39/190 (20%)
Query: 1 MQYSTI--FIILSAITMMSISGIDNLDTKISSPDTVLN-------------ESSLQEQFS 45
M + I ++L++ + D + K + D+ S EQ
Sbjct: 7 MNLAVIGSMLMLASCSSTRPDNSDLIKDKYAGVDSSQALEMSSQIYGSDKLSSDQVEQMK 66
Query: 46 SSVGDS----VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIA 100
+ + V+F SY+I + L + + D + G+ D GS +
Sbjct: 67 KELMNINCRSVYFGFDSYNIIDDAKECLDKTADYLIAHPDQPIKLSGNTDPRGSEKYNFN 126
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG-------------------HDED 141
LG +RA AV+NY + + ++ ++ V SYGK P+ E
Sbjct: 127 LGQKRAEAVYNYLLGKNVNKDQICVVSYGKLKPAAEPTQFYDEFCKDGVNDACMYKASEK 186
Query: 142 AYAKNRRAIV 151
A+ +RR +
Sbjct: 187 AFYLDRRTEI 196
>gi|332702327|ref|ZP_08422415.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay]
gi|332552476|gb|EGJ49520.1| OmpA/MotB domain protein [Desulfovibrio africanus str. Walvis Bay]
Length = 282
Score = 49.4 bits (116), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 42/125 (33%), Gaps = 15/125 (12%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHA----DELGSRN--- 96
S+ + F+ + ++ + L + FL+ GH DEL +
Sbjct: 110 QIMSISSDILFEPGQTKLSERGRDLVGRMAPVLRELPQPFLLAGHTSTLRDELKTEYLDY 169
Query: 97 --------SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
+ L RA A++ + G+ RM+V ++ P NRR
Sbjct: 170 KPKDGEPNPGWRISLGRAMAMYRELLVHGVPVERMRVEAFADYRPRFGNETAAERRMNRR 229
Query: 149 AIVFL 153
+ L
Sbjct: 230 VDIVL 234
>gi|330465991|ref|YP_004403734.1| OmpA/MotB domain-containing protein [Verrucosispora maris
AB-18-032]
gi|328808962|gb|AEB43134.1| OmpA/MotB domain protein [Verrucosispora maris AB-18-032]
Length = 407
Score = 49.4 bits (116), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 44/130 (33%), Gaps = 10/130 (7%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADE 91
+ + + ++ + F T S I PA L+ + + + GH D
Sbjct: 276 GAGPPAEPVQTVTFNIPSAALFATDSDEIGPAGRNRLAEIAEENKLPKATHLEVVGHTDS 335
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH-------DEDAYA 144
+ + L RRA AV G+ S K G+E+ D+
Sbjct: 336 RDDADYNQDLSERRAAAVGRILRELGVPVS--KTRGRGEEVRLCLAERLPGGGWDDACLQ 393
Query: 145 KNRRAIVFLK 154
+NRR + +
Sbjct: 394 RNRRVEIVIS 403
>gi|38146954|gb|AAR11862.1| peptidoglycan-associated lipoprotein [Ehrlichia canis]
gi|38146956|gb|AAR11863.1| peptidoglycan-associated lipoprotein [Ehrlichia canis]
gi|38146958|gb|AAR11864.1| peptidoglycan-associated lipoprotein [Ehrlichia canis]
gi|38146960|gb|AAR11865.1| peptidoglycan-associated lipoprotein [Ehrlichia canis]
gi|38146962|gb|AAR11866.1| peptidoglycan-associated lipoprotein [Ehrlichia canis]
Length = 141
Score = 49.4 bits (116), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 58/137 (42%), Gaps = 10/137 (7%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M++ +FI + + +S D + + + ++FD +
Sbjct: 1 MKHKLVFIKF-ILLCLILSSCKTTDHVPLVNTDHVFSN-------MKTIEKIYFDFGKAT 52
Query: 61 IRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
I +D +L + + + + +I GH D G+ ++ LG +RA AV ++ + S
Sbjct: 53 IGDSDKAILEKVIQKAQKDTNTNIVIVGHTDTRGTDEYNLELGEQRANAVKDFIIEHDKS 112
Query: 120 -ASRMKVTSYGKEMPSV 135
+R+ V S GK P+V
Sbjct: 113 LENRITVQSKGKSEPAV 129
>gi|126731561|ref|ZP_01747367.1| OmpA/MotB [Sagittula stellata E-37]
gi|126708097|gb|EBA07157.1| OmpA/MotB [Sagittula stellata E-37]
Length = 220
Score = 49.4 bits (116), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 52/136 (38%), Gaps = 6/136 (4%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG---SWLEK 78
D + ++ S+ S+ + F +S + P + LS+L
Sbjct: 83 DRTEVPQNAAAGGTGGSTAAPAPLPSIDLEILFAYNSDDLTPEAMGKLSSLADALRDPRL 142
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV-ARGISASRMKVTSYGKEMPSVYG 137
D + GH D +GS ++ L RRA AV + G+ SR++ G
Sbjct: 143 SDARLVFIGHTDGVGSAAYNMDLSRRRAEAVARFVQGTMGLPPSRIRAEGVGFSRL--KN 200
Query: 138 HDEDAYAKNRRAIVFL 153
+ A A+NRR + L
Sbjct: 201 SFDPAAAQNRRVQLVL 216
>gi|312959447|ref|ZP_07773964.1| OmpA/MotB [Pseudomonas fluorescens WH6]
gi|311286164|gb|EFQ64728.1| OmpA/MotB [Pseudomonas fluorescens WH6]
Length = 381
Score = 49.4 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 30/69 (43%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
L+ GH D G+ +S AL RA ++ + F G+ R+ + G MP
Sbjct: 222 VLVLGHVDATGTAPASQALTKERAQSIASIFSLSGLKQDRLMLRGMGDLMPRAANDSNQG 281
Query: 143 YAKNRRAIV 151
A NRR +
Sbjct: 282 RALNRRMEI 290
>gi|169839536|ref|ZP_02872724.1| OmpA/MotB domain protein [candidate division TM7 single-cell
isolate TM7a]
Length = 172
Score = 49.4 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 23/73 (31%), Gaps = 4/73 (5%)
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV---TSYGKEMPSVYGH 138
GH D G++ + L L RA + + + G+E P
Sbjct: 90 TVDFIGHTDSTGTKKYNQKLSLTRARNAAR-LFREFGLKDAISIGEISGKGEEDPVDLNE 148
Query: 139 DEDAYAKNRRAIV 151
+ NRR +
Sbjct: 149 TDQGKYINRRVEI 161
>gi|330447921|ref|ZP_08311569.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328492112|dbj|GAA06066.1| ompA family protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 332
Score = 49.4 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 11/153 (7%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSN 71
+ ++ + K S ++ + + D F S ++ P VL N
Sbjct: 129 LAVLASVVEETAKQVSAQGNISVDVTPQGLRIILQDDFKQNMFHRGSANLTPFFEDVLLN 188
Query: 72 LGSWLEKHDCDFLIEGHAD-----ELGSRNSSIALGLRRAYAVFNYFVARGISASR-MKV 125
+ ++ +I GH D SR+++ L RA +A G+ ++R ++V
Sbjct: 189 IAPIFKQISNSLIISGHTDATQFKSKFSRSTNWELSSSRANVARQTLIAGGMPSNRVLQV 248
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
+ + ++NRR +F+ A
Sbjct: 249 AGMAERALLNKQSPDA--SENRRIELFILTTPA 279
>gi|86132811|ref|ZP_01051403.1| OmpA family protein [Dokdonia donghaensis MED134]
gi|85816765|gb|EAQ37951.1| OmpA family protein [Dokdonia donghaensis MED134]
Length = 368
Score = 49.4 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 7/109 (6%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSW--LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
+ ++T+S ++ PA ++ E I H D G+ +S+ L RRA +V
Sbjct: 257 INWNTNSATLTPAAKNIIDTRLMPLLAENPGVKLEIASHTDSRGAASSNQDLSERRAQSV 316
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGH-----DEDAYAKNRRAIVFL 153
NY +++G++ S + +G+ E +A NRR L
Sbjct: 317 ANYLISKGVNNSLLVANGFGERKLKNRCADGVSCTERQHAANRRTEFRL 365
>gi|116252498|ref|YP_768336.1| OmpA family protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115257146|emb|CAK08241.1| putative OmpA family protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 729
Score = 49.4 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 8/108 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWL-----EKHDCDFLIEGHADELGSRNSSIALGLR 104
D++ F T S I + L + + + FLIEGH D +GS S++ L +
Sbjct: 610 DTITFATGSADIPMTQARTLRKVADAISQVLEKDPSETFLIEGHTDAVGSDQSNLILSDQ 669
Query: 105 RAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA +V N GI+ + YG+ V + +NRR +
Sbjct: 670 RAESVANVLSDVYGIAPENLATQGYGESYLKVNTSAPE--QENRRVTI 715
>gi|330825361|ref|YP_004388664.1| OmpA/MotB domain-containing protein [Alicycliphilus denitrificans
K601]
gi|329310733|gb|AEB85148.1| OmpA/MotB domain protein [Alicycliphilus denitrificans K601]
Length = 234
Score = 49.4 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 46/131 (35%), Gaps = 8/131 (6%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
++ I+S E EQ + V F +S + P+ L + L +
Sbjct: 101 ESAPPPIASVPAKAPEPPAFEQVA------VHFPFASAQLGPSARAALREVAPRLAQ-AS 153
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDE 140
+ + G D G ++ L RA AV +A A+ + V + G +
Sbjct: 154 EITLSGRTDSTGPAATNDGLAKARAQAVLRQLLALSPAIAAHVSVDAQGTCCYAESNDSP 213
Query: 141 DAYAKNRRAIV 151
A NRR +
Sbjct: 214 AGRANNRRVEI 224
>gi|307256515|ref|ZP_07538296.1| hypothetical protein appser10_5200 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306864925|gb|EFM96827.1| hypothetical protein appser10_5200 [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
Length = 283
Score = 49.4 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 43/114 (37%), Gaps = 9/114 (7%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRR 105
++ FD ++ V+ N+ + L+ + G+ D LGS ++ L RR
Sbjct: 138 NLSGDFLFDFDKDTLTAKGKDVVDNVAAQLKSSKAEQVKVAGYTDRLGSEKYNLDLSQRR 197
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD-------EDAYAKNRRAIVF 152
A V V +G++A + YGK +D NRR V
Sbjct: 198 ANMVKARLVQQGVTA-NINAVGYGKAQQVKACDGIPHGQELKDCLRPNRRVEVT 250
>gi|91777230|ref|YP_552438.1| OmpA/MotB family outer membrane protein [Burkholderia xenovorans
LB400]
gi|91689890|gb|ABE33088.1| outer membrane protein, OmpA/MotB family [Burkholderia xenovorans
LB400]
Length = 372
Score = 49.4 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 55/141 (39%), Gaps = 10/141 (7%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSS-YSIRPADIQVLSNLGSWLEK 78
G+ + P ++ ++ + + FD + PA L L L++
Sbjct: 203 GVAAALEACTPPPVAATVPAVPQKMTLQADATFRFDRGDLAGMLPAGKAKLDELVRNLKQ 262
Query: 79 --HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
I+G+ D LGS + + L +RA V Y ++ G++A + GKE P V
Sbjct: 263 ADDVTSIRIDGYTDRLGSDSYNRQLSAKRAETVKRYLLSGGVTAP-ISARGRGKEDPVVQ 321
Query: 137 GHD------EDAYAKNRRAIV 151
+D A NRR +
Sbjct: 322 CNDHNREALIACLAPNRRVEL 342
>gi|149912933|ref|ZP_01901467.1| OmpA/MotB [Roseobacter sp. AzwK-3b]
gi|149813339|gb|EDM73165.1| OmpA/MotB [Roseobacter sp. AzwK-3b]
Length = 512
Score = 49.4 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 48/145 (33%), Gaps = 12/145 (8%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDT-----SSYSIRPADIQVLSNLGSWL 76
D I+ + + LQ + T S + + L L
Sbjct: 368 DRFANAITQAGSEVGLEELQRMVALLSPLRRLTTTFRFEAGSARLDAQSRSNVQQLARAL 427
Query: 77 E---KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS----RMKVTSYG 129
E + G +D G + + +RA AV +A +A+ ++ ++G
Sbjct: 428 EIGLYDARRLVFVGFSDGEGPAAGNRRIAEQRAEAVKTAVIAAAETANLSRITIETAAFG 487
Query: 130 KEMPSVYGHDEDAYAKNRRAIVFLK 154
+ MP E NRR V+++
Sbjct: 488 EAMPMACDDSEWGRQVNRRVEVWVR 512
>gi|254564113|ref|YP_003071208.1| hypothetical protein METDI5803 [Methylobacterium extorquens DM4]
gi|254271391|emb|CAX27404.1| Conserved hypothetical protein; putative OmpA family member
[Methylobacterium extorquens DM4]
Length = 717
Score = 49.4 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 8/128 (6%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-----FL 84
+ D V L+ + S +++ FDT S+++ P + LS + + + D FL
Sbjct: 572 TLDQVRYSPQLRARMPSVDINTITFDTGSFTVTPDQAKRLSTIAEAINRTIKDNPQEVFL 631
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAY 143
IEG+ D +GS +++L RRA +V + + YG++ V + ++A
Sbjct: 632 IEGYTDAVGSDIDNLSLSDRRAQSVASVLTQNFQVPPENLTTQGYGEQYLKV--NTQEAN 689
Query: 144 AKNRRAIV 151
+NRR V
Sbjct: 690 RENRRVTV 697
>gi|220919231|ref|YP_002494535.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
gi|219957085|gb|ACL67469.1| OmpA/MotB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 357
Score = 49.4 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 20/70 (28%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
+E D + L A A G++ R+ G E P +
Sbjct: 283 VRVEAFVDATPDAQADQRLSQAMADAAVGRLRELGVAERRLSGVGCGGERPLLPNFTVRG 342
Query: 143 YAKNRRAIVF 152
NRR +
Sbjct: 343 RTANRRLEIV 352
>gi|83311658|ref|YP_421922.1| flagellar motor protein [Magnetospirillum magneticum AMB-1]
gi|82946499|dbj|BAE51363.1| Flagellar motor protein [Magnetospirillum magneticum AMB-1]
Length = 220
Score = 49.4 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 46/141 (32%), Gaps = 13/141 (9%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG---SWLEKHDCD 82
+ + ++ + ++ F S +RP + ++ + +
Sbjct: 77 VAGAGVEDTVDVGRDDKGIVLNLASGTMFKPGSAEVRPEILPLMKEISGTLKQERFLNYQ 136
Query: 83 FLIEGHADELG----SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
I+GH D+ S+ L RA + GI SRMK+ + P V
Sbjct: 137 IDIQGHTDDTPVRTPQFPSNWDLSAARALSTLKVMNELGIPTSRMKLAALADTAPRVPNR 196
Query: 139 D------EDAYAKNRRAIVFL 153
+ A NRR + +
Sbjct: 197 SDTGKAYPENQAINRRVEIHI 217
>gi|213964189|ref|ZP_03392425.1| OmpA/MotB domain protein [Capnocytophaga sputigena Capno]
gi|213953156|gb|EEB64502.1| OmpA/MotB domain protein [Capnocytophaga sputigena Capno]
Length = 399
Score = 49.4 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 52/134 (38%), Gaps = 2/134 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHD 80
+ D+ + + S +FD +S + + + +G +++ +
Sbjct: 267 QAKAGNAVANDSDVASGDVAADLIRKGYISAYFDFNSSEPQVSSSWSIDFVGKYMKENPN 326
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ G+ADELG N + L +RA AV N V GI A+R+ G +
Sbjct: 327 AHITVNGYADELGGTNYNTTLSQKRADAVKNLLVKAGIDANRITAQGKGVDNSVDKN-SP 385
Query: 141 DAYAKNRRAIVFLK 154
A R+A LK
Sbjct: 386 KARQLARKATFELK 399
>gi|120603950|ref|YP_968350.1| OmpA/MotB domain-containing protein [Desulfovibrio vulgaris DP4]
gi|120564179|gb|ABM29923.1| OmpA/MotB domain protein [Desulfovibrio vulgaris DP4]
Length = 364
Score = 49.4 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 13/123 (10%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG---------- 93
S+ V F + ++L+ L + L+ GHA
Sbjct: 114 QILSIDADVLFGPGETRLSKEGERLLATFAPTLRTIEHPLLVAGHASPPRDEQGAGFRLR 173
Query: 94 ---SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
+ + S L LRRA +V+ G+ +SR+ + +G P NRR
Sbjct: 174 AEGTLSPSWMLSLRRATSVYRALRDLGVPSSRLILEGFGDGHPRHDAFTATGRRANRRVD 233
Query: 151 VFL 153
+ L
Sbjct: 234 LVL 236
>gi|46578466|ref|YP_009274.1| OmpA family protein [Desulfovibrio vulgaris str. Hildenborough]
gi|46447877|gb|AAS94533.1| OmpA family protein [Desulfovibrio vulgaris str. Hildenborough]
gi|311232394|gb|ADP85248.1| OmpA/MotB domain protein [Desulfovibrio vulgaris RCH1]
Length = 364
Score = 49.4 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 13/123 (10%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG---------- 93
S+ V F + ++L+ L + L+ GHA
Sbjct: 114 QILSIDADVLFGPGETRLSKEGERLLATFAPTLRTIEHPLLVAGHASPPRDEQGAGFRLR 173
Query: 94 ---SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
+ + S L LRRA +V+ G+ +SR+ + +G P NRR
Sbjct: 174 AEGTLSPSWMLSLRRATSVYRALRDLGVPSSRLILEGFGDGHPRHDAFTATGRRANRRVD 233
Query: 151 VFL 153
+ L
Sbjct: 234 LVL 236
>gi|158318192|ref|YP_001510700.1| OmpA/MotB domain-containing protein [Frankia sp. EAN1pec]
gi|158113597|gb|ABW15794.1| OmpA/MotB domain protein [Frankia sp. EAN1pec]
Length = 186
Score = 49.4 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 4/117 (3%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNS 97
+ S+V FD +S +RP L+ + +HD + G++D LG+
Sbjct: 74 TQADGSRVSTVSADYLFDANSADLRPEAATALAGTVPQIREHDGRVQVVGYSDGLGTTEH 133
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
++ L RRA AV Y V++ I AS ++V + G+ + G + + RR + L+
Sbjct: 134 NLDLSRRRAVAVQAYLVSQDIPASLLEVEAKGE-QGATDGVADASR---RRVEIVLR 186
>gi|209546431|ref|YP_002278321.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209539288|gb|ACI59221.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 642
Score = 49.4 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 41/111 (36%), Gaps = 7/111 (6%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLR 104
S+ + FD + S + L L++ ++ GH D G + + L R
Sbjct: 529 VSIPVPITFDFNKSSFTSIGTEAAQELLEALKEQKPGRVILIGHTDRRGGDDYNQKLSER 588
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE-----DAYAKNRRAI 150
RA AV ++ + GI AS + G P D A NRR
Sbjct: 589 RAQAVADFLKSNGIDAS-IDAEGRGASEPVDVTATANLTEDDVDALNRRVE 638
>gi|307249694|ref|ZP_07531674.1| hypothetical protein appser4_4980 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306858260|gb|EFM90336.1| hypothetical protein appser4_4980 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
Length = 164
Score = 49.4 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 44/114 (38%), Gaps = 9/114 (7%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRR 105
++ FD ++ +V+ N+ + L+ + G+ D LGS ++ L RR
Sbjct: 19 NLSGDFLFDFDKDTLTAKGKEVVDNVAAQLKSSKAEQVKVAGYTDRLGSEKYNLDLSQRR 78
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD-------EDAYAKNRRAIVF 152
A V V +G++A + YGK +D NRR V
Sbjct: 79 ANMVKARLVQQGVTA-NINAVGYGKAQQVKACDGIPHGQELKDCLRPNRRVEVT 131
>gi|59801906|ref|YP_208618.1| Omp3 [Neisseria gonorrhoeae FA 1090]
gi|194099400|ref|YP_002002501.1| Omp3 [Neisseria gonorrhoeae NCCP11945]
gi|239999644|ref|ZP_04719568.1| Omp3 [Neisseria gonorrhoeae 35/02]
gi|240014818|ref|ZP_04721731.1| Omp3 [Neisseria gonorrhoeae DGI18]
gi|240017267|ref|ZP_04723807.1| Omp3 [Neisseria gonorrhoeae FA6140]
gi|240081094|ref|ZP_04725637.1| Omp3 [Neisseria gonorrhoeae FA19]
gi|240113304|ref|ZP_04727794.1| Omp3 [Neisseria gonorrhoeae MS11]
gi|240116345|ref|ZP_04730407.1| Omp3 [Neisseria gonorrhoeae PID18]
gi|240118630|ref|ZP_04732692.1| Omp3 [Neisseria gonorrhoeae PID1]
gi|240121340|ref|ZP_04734302.1| Omp3 [Neisseria gonorrhoeae PID24-1]
gi|240124175|ref|ZP_04737131.1| Omp3 [Neisseria gonorrhoeae PID332]
gi|240126207|ref|ZP_04739093.1| Omp3 [Neisseria gonorrhoeae SK-92-679]
gi|240128845|ref|ZP_04741506.1| Omp3 [Neisseria gonorrhoeae SK-93-1035]
gi|254494359|ref|ZP_05107530.1| outer membrane protein P.III [Neisseria gonorrhoeae 1291]
gi|260439836|ref|ZP_05793652.1| Omp3 [Neisseria gonorrhoeae DGI2]
gi|268595455|ref|ZP_06129622.1| outer membrane protein PIII [Neisseria gonorrhoeae 35/02]
gi|268597207|ref|ZP_06131374.1| outer membrane protein PIII [Neisseria gonorrhoeae FA19]
gi|268599383|ref|ZP_06133550.1| outer membrane protein P.III [Neisseria gonorrhoeae MS11]
gi|268602011|ref|ZP_06136178.1| outer membrane protein P.III [Neisseria gonorrhoeae PID18]
gi|268604343|ref|ZP_06138510.1| outer membrane protein P.III [Neisseria gonorrhoeae PID1]
gi|268682799|ref|ZP_06149661.1| outer membrane protein P.III [Neisseria gonorrhoeae PID332]
gi|268684790|ref|ZP_06151652.1| outer membrane protein P.III [Neisseria gonorrhoeae SK-92-679]
gi|268687227|ref|ZP_06154089.1| outer membrane protein P.III [Neisseria gonorrhoeae SK-93-1035]
gi|291043111|ref|ZP_06568834.1| outer membrane protein PIII [Neisseria gonorrhoeae DGI2]
gi|293398450|ref|ZP_06642628.1| outer membrane protein P.III [Neisseria gonorrhoeae F62]
gi|129131|sp|P07050|OMP3_NEIGO RecName: Full=Outer membrane protein P.III; AltName:
Full=Gonococcal protein III; Short=PIII; Flags:
Precursor
gi|44890|emb|CAA28752.1| unnamed protein product [Neisseria gonorrhoeae]
gi|59718801|gb|AAW90206.1| outer membrane protein PIII [Neisseria gonorrhoeae FA 1090]
gi|193934690|gb|ACF30514.1| Omp3 [Neisseria gonorrhoeae NCCP11945]
gi|226513399|gb|EEH62744.1| outer membrane protein P.III [Neisseria gonorrhoeae 1291]
gi|268548844|gb|EEZ44262.1| outer membrane protein PIII [Neisseria gonorrhoeae 35/02]
gi|268550995|gb|EEZ46014.1| outer membrane protein PIII [Neisseria gonorrhoeae FA19]
gi|268583514|gb|EEZ48190.1| outer membrane protein P.III [Neisseria gonorrhoeae MS11]
gi|268586142|gb|EEZ50818.1| outer membrane protein P.III [Neisseria gonorrhoeae PID18]
gi|268588474|gb|EEZ53150.1| outer membrane protein P.III [Neisseria gonorrhoeae PID1]
gi|268623083|gb|EEZ55483.1| outer membrane protein P.III [Neisseria gonorrhoeae PID332]
gi|268625074|gb|EEZ57474.1| outer membrane protein P.III [Neisseria gonorrhoeae SK-92-679]
gi|268627511|gb|EEZ59911.1| outer membrane protein P.III [Neisseria gonorrhoeae SK-93-1035]
gi|291012717|gb|EFE04700.1| outer membrane protein PIII [Neisseria gonorrhoeae DGI2]
gi|291610921|gb|EFF40018.1| outer membrane protein P.III [Neisseria gonorrhoeae F62]
gi|317164900|gb|ADV08441.1| Omp3 [Neisseria gonorrhoeae TCDC-NG08107]
Length = 236
Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 47/118 (39%), Gaps = 1/118 (0%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
+ + +P V+ ++ + S+ F S+R L L
Sbjct: 61 VECGDAVAVPEPEPAPVAVVEQAPQYVDETISLSAKTLFGFDKDSLRAEAQDNLKVLAQR 120
Query: 76 LEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
L + + +EGH D +GS + AL RRAY V N V+ G+ ASR+ G+
Sbjct: 121 LSRTNVQSVRVEGHTDFMGSEKYNQALSERRAYVVANNLVSNGVPASRISAVGLGESQ 178
>gi|251733463|emb|CAR82481.1| pal [Agrobacterium rhizogenes]
Length = 87
Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/85 (43%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 56 TSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
T S SIR Q L W + +EGHADE G+R ++ALG RRA A +Y
Sbjct: 1 TDSTSIRSDASQTLDRQAQWLARYPNYAITVEGHADERGTREYNLALGARRAAATKDYLA 60
Query: 115 ARGISASRMKVTSYGKEMPSVYGHD 139
+RG+ A RMK SYGKE P D
Sbjct: 61 SRGVPAQRMKTISYGKERPVATCDD 85
>gi|59714283|ref|YP_207058.1| outer membrane protein A [Vibrio fischeri ES114]
gi|59482531|gb|AAW88170.1| outer membrane protein A [Vibrio fischeri ES114]
Length = 324
Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 49/135 (36%), Gaps = 9/135 (6%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV--LSNLGSWLEKH 79
P+T++ + V ++ F+ Q + L +++
Sbjct: 186 KAKPEPELKPETIVKLVPEATYYPEQV--TLHFEFGESRFVVESKQWHSWNELALSVKQG 243
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH- 138
I G+ D G+ +++ LRRA + + G+ R+ + S G P V
Sbjct: 244 QGKVSITGYTDAKGTDSANDIESLRRATYAADMLIKAGVDEERILINSKGSADPLVNEDL 303
Query: 139 --DEDAYAKNRRAIV 151
+E A NRR ++
Sbjct: 304 MRNES--ALNRRVVI 316
>gi|183220368|ref|YP_001838364.1| hypothetical protein LEPBI_I0964 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189910483|ref|YP_001962038.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167775159|gb|ABZ93460.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167778790|gb|ABZ97088.1| Hypothetical protein; putative signal peptide [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length = 229
Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 47/115 (40%), Gaps = 5/115 (4%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIA 100
+ + V F + ++ P ++++ +G +E + + I GH D +G+ + ++
Sbjct: 110 RELLIIIDGDVAFPSGKSTLTPKAKELIAKVGDAMEAYPETNCRIGGHTDSVGAFSMNLK 169
Query: 101 LGLRRAYAVFNYFV--ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L R+ +V + +V Y + V A KNRR +++
Sbjct: 170 LSKERSQSVKRELKLVHKIAEERFKEVDGYADQQKIVD--TMLAEKKNRRTEIYV 222
>gi|149925995|ref|ZP_01914258.1| OmpA/MotB [Limnobacter sp. MED105]
gi|149825283|gb|EDM84494.1| OmpA/MotB [Limnobacter sp. MED105]
Length = 179
Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 36/102 (35%), Gaps = 5/102 (4%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGLRRAYAV 109
F S + + L L D ++ GHAD G + + L RA AV
Sbjct: 77 HFQLGSAELPAELKKQLDVFAQVLSNRPSDSPPIVVTGHADASGDASLNQVLSSERAKAV 136
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
Y +G+S ++V G E + NRR +
Sbjct: 137 KTYLTQKGVSPRLLRVEGKGAEKLVDVNNPFA--PANRRVEI 176
>gi|118594345|ref|ZP_01551692.1| outer membrane protein, porin-associated lipoprotein
[Methylophilales bacterium HTCC2181]
gi|118440123|gb|EAV46750.1| outer membrane protein, porin-associated lipoprotein
[Methylophilales bacterium HTCC2181]
Length = 179
Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/102 (32%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
SV+FD S++I+ V+SN +++ KHD ++ G+AD GS ++ALG +RA AV
Sbjct: 74 RSVYFDYDSFAIKSDFEGVISNHATFINKHDAAVVVYGNADYRGSHEYNLALGQKRAVAV 133
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
A G++ S ++ S+G+E + ++RRA +
Sbjct: 134 KQALEALGVNGSAIETISFGEEH-ANQTCTGSTCGQDRRADI 174
>gi|307943350|ref|ZP_07658694.1| OmpA/MotB domain-containing protein [Roseibium sp. TrichSKD4]
gi|307772980|gb|EFO32197.1| OmpA/MotB domain-containing protein [Roseibium sp. TrichSKD4]
Length = 192
Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 46/139 (33%), Gaps = 8/139 (5%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG---SW 75
+ DN+ + +L+ + FD S IRP + + +
Sbjct: 53 AAFDNIKKYPGDNAAEVLPLALKLNQLRQFNVEITFDFDSDRIRPESYETVGVIADALHT 112
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPS 134
F + GH D G R +I L RRA A+ + R++ G+E
Sbjct: 113 PYLWGAKFFVVGHTDAKGDREYNIKLSQRRADAIREALITTFRVPADRLEAVGLGEEQLR 172
Query: 135 VY-GHDEDAYAKNRRAIVF 152
D + NRR +
Sbjct: 173 DPENPDAE---VNRRVQLI 188
>gi|241759220|ref|ZP_04757326.1| outer membrane Protein p.iii [Neisseria flavescens SK114]
gi|241320356|gb|EER56653.1| outer membrane Protein p.iii [Neisseria flavescens SK114]
Length = 253
Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/157 (20%), Positives = 57/157 (36%), Gaps = 21/157 (13%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+ ++ + ++ + S+ F ++RP + L L L
Sbjct: 57 ATQGRVECGDREAVAPVQQAPEYVDETVSLSTKTLFGFDKDNLRPEAQENLDALAQRLSN 116
Query: 79 HDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+ +EGH D +GS + AL RRA V NY V RG+++S++ G+ +
Sbjct: 117 KNVETVRVEGHTDFMGSEQYNQALSERRANVVANYLVGRGVASSKISAVGLGESQARMTA 176
Query: 138 HDEDAYAK--------------------NRRAIVFLK 154
E AK +RR V ++
Sbjct: 177 TCEAEVAKLGKKVSKAKKRAALIACIEPDRRVDVKIR 213
>gi|330811342|ref|YP_004355804.1| hypothetical protein PSEBR_a4391 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327379450|gb|AEA70800.1| Conserved hypothetical protein; putative exported protein
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 325
Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 47/112 (41%), Gaps = 2/112 (1%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGS 94
L + F + F + + L + +++ ++GH+D G+
Sbjct: 161 AKLLPKNFEQVKQTQIGFPGEAAELDAHAKAQLQVMLDFIKADPSVNHVELDGHSDNSGN 220
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
R ++ L RRA AV ++F A G S++ + +G+ P V + AKN
Sbjct: 221 RLTNRELSRRRALAVQDFFKANGFQESQITLRFHGERYPLVPNTNAANRAKN 272
>gi|83950725|ref|ZP_00959458.1| OmpA domain protein [Roseovarius nubinhibens ISM]
gi|83838624|gb|EAP77920.1| OmpA domain protein [Roseovarius nubinhibens ISM]
Length = 493
Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 122 RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
R++ ++G+ MP E NRR V+++
Sbjct: 461 RIETQAFGEAMPMACDDSEWGRRANRRVEVWVR 493
>gi|298369983|ref|ZP_06981299.1| OmpA family protein [Neisseria sp. oral taxon 014 str. F0314]
gi|298281443|gb|EFI22932.1| OmpA family protein [Neisseria sp. oral taxon 014 str. F0314]
Length = 227
Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 55/146 (37%), Gaps = 21/146 (14%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGH 88
+ ++ + + S+ F +RP + L+ L L + +EGH
Sbjct: 45 GDAVAVEQAPEYAEETVSLSAKTLFGFDKDILRPEAKESLNALAQRLSNSNVESVRVEGH 104
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA------ 142
D +GS + AL RRA V NY V +G++++++ G+ + G E
Sbjct: 105 TDFMGSEQYNQALSERRANVVANYLVNQGVASNKISAVGLGESQAQMTGTCEAEVANLGK 164
Query: 143 -------YAK-------NRRAIVFLK 154
A +RR V ++
Sbjct: 165 KVSKAKRRAALIACIEPDRRVDVKIR 190
>gi|120556584|ref|YP_960935.1| OmpA/MotB domain-containing protein [Marinobacter aquaeolei VT8]
gi|120326433|gb|ABM20748.1| OmpA/MotB domain protein [Marinobacter aquaeolei VT8]
Length = 146
Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 52/132 (39%), Gaps = 8/132 (6%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGD----SVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
D L + Q ++ + + +++ DI +L ++++ H
Sbjct: 7 DNPDMLAKAALAFAGTNGQLAADADRPHRTRFHYGFNKHTLDAPDIDMLKRHAAYIKGHP 66
Query: 81 -CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
I GHAD GS + L RA AV + G+S S + + ++G + P
Sbjct: 67 GMQVRIHGHADNFGSAEYNRFLARLRANAVARLLIQEGVSQSSILLATWGSDRPL---TR 123
Query: 140 EDAYAKNRRAIV 151
+ +A NRR +
Sbjct: 124 PEDHAANRRVEL 135
>gi|251733457|emb|CAR82478.1| pal [Rhizobium leguminosarum]
Length = 87
Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 56 TSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
T S SIR Q L W + +EGHADE G+R ++ALG RRA A +Y
Sbjct: 1 TDSSSIRADASQTLDRQAQWLARYPNYQITVEGHADERGTREYNLALGARRAAAAKDYLA 60
Query: 115 ARGISASRMKVTSYGKEMPSVYGHD 139
+RG+ A R+K SYGKE P D
Sbjct: 61 SRGVPAQRLKTISYGKERPVAVCDD 85
>gi|327405082|ref|YP_004345920.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
16823]
gi|327320590|gb|AEA45082.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
Length = 694
Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 7/115 (6%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDS------VFFDTSSYSIRPADIQVLSNLGSWLEKH 79
T +++ S ++ + + + +D +S +RPA VL L +LE +
Sbjct: 528 TSVNTNSITQTTSITRDFYLRPIPQDEIEIEGIEYDFNSDKLRPASEAVLDKLLEFLELN 587
Query: 80 DCDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
+ + I H D G ++ L RRA + +Y V++GI+ R+ YG+ P
Sbjct: 588 NNIVVEINSHTDARGKDIYNLDLSQRRAKSCVDYLVSKGITPERLIAKGYGETQP 642
>gi|39935079|ref|NP_947355.1| putative chemotaxis protein motB1 [Rhodopseudomonas palustris
CGA009]
gi|192290612|ref|YP_001991217.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1]
gi|39648930|emb|CAE27451.1| putative chemotaxis protein motB1 [Rhodopseudomonas palustris
CGA009]
gi|192284361|gb|ACF00742.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1]
Length = 274
Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 43/152 (28%), Gaps = 10/152 (6%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
A+ S+ +IS + ++ + + D F S
Sbjct: 113 FALASASLRQALQNMPEISELSKNIMFEETKQGLNLEIMDQDGRSMFADGSKVPFERTRL 172
Query: 68 VLSNLGSWLEKHDCDFLIEGHADE----LGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
+L L L I GH S + L RA +V G+ S +
Sbjct: 173 LLQRLAVPLRATPLRVTIVGHTSSGLMPERSDYNGWDLSSDRANSVRQILEREGLPGSHI 232
Query: 124 KVT-SYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
P D+ + A NRR + L
Sbjct: 233 FAVTGKADSQPLFP--DDPSIAANRRVTITLM 262
>gi|189423395|ref|YP_001950572.1| OmpA/MotB domain protein [Geobacter lovleyi SZ]
gi|189419654|gb|ACD94052.1| OmpA/MotB domain protein [Geobacter lovleyi SZ]
Length = 201
Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 53/150 (35%), Gaps = 10/150 (6%)
Query: 5 TIFIILSAITMMSISGID--NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIR 62
IL AI +++ D + + PD V + + +V F +S +
Sbjct: 53 NKLTILPAIAKLAVRMSDPMTIQPPATQPDVVTVTPRNELPEIKGLLGTVHFQLNSSRLS 112
Query: 63 PADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASR 122
+ L + + + + G+ +G+ + + L RA AV A+G+
Sbjct: 113 QFEQGNLEKISRDIPAGNA-VDVTGYTCTIGTDDYNKKLSFSRAEAVATVLKAKGVHIG- 170
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ GK P+ +NRR +
Sbjct: 171 -TIEGKGKCCPAS-----QDKQQNRRVEII 194
>gi|262164958|ref|ZP_06032696.1| outer membrane protein [Vibrio mimicus VM223]
gi|262027338|gb|EEY46005.1| outer membrane protein [Vibrio mimicus VM223]
Length = 81
Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 34/75 (45%)
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
++EGHAD+ G+ + AL RRA AV Y +R+ +G+ P +
Sbjct: 5 QYKIVVEGHADQTGNPKYNQALSERRAGAVTRYLRDTLKLGNRIVEKGFGESAPVCTVQE 64
Query: 140 EDAYAKNRRAIVFLK 154
NRR ++ ++
Sbjct: 65 NAQTGCNRRVVLKIQ 79
>gi|171060730|ref|YP_001793079.1| OmpA/MotB domain-containing protein [Leptothrix cholodnii SP-6]
gi|170778175|gb|ACB36314.1| OmpA/MotB domain protein [Leptothrix cholodnii SP-6]
Length = 200
Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGLRRAYA 108
+ F+T+S + P+ Q L + + L+ + F +EGHAD G +++ L RA +
Sbjct: 94 ITFETNSARLTPSSRQQLDTVAAALKSNQLQAYGFNLEGHADPRGQASTNRQLSQMRAES 153
Query: 109 VFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
V +Y VA R+ G P + A +NRR +
Sbjct: 154 VRDYLVATHGIPVDRLAPIGKGDTEPL--NTRDVAAPENRRVTIV 196
>gi|319639245|ref|ZP_07993996.1| outer membrane protein class 4 [Neisseria mucosa C102]
gi|317399429|gb|EFV80099.1| outer membrane protein class 4 [Neisseria mucosa C102]
Length = 253
Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/157 (19%), Positives = 55/157 (35%), Gaps = 21/157 (13%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+ ++ + ++ + S+ F ++RP + L L L
Sbjct: 57 ATQGRVECGDREAVAPVQQAPEYVDETVSLSTKTLFGFDKDNLRPEAQENLDALAQRLSN 116
Query: 79 HDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+EGH D +GS + AL RRA V NY V G+++S++ G+ +
Sbjct: 117 ESVQTVRVEGHTDFMGSEQYNQALSERRANVVANYLVGHGVASSKISAVGLGESQARMTA 176
Query: 138 HDEDAYAK--------------------NRRAIVFLK 154
E AK +RR V ++
Sbjct: 177 TCEAEVAKLGKKVSKAKKRAALIACIEPDRRVDVKIR 213
>gi|225075466|ref|ZP_03718665.1| hypothetical protein NEIFLAOT_00471 [Neisseria flavescens
NRL30031/H210]
gi|224953284|gb|EEG34493.1| hypothetical protein NEIFLAOT_00471 [Neisseria flavescens
NRL30031/H210]
Length = 253
Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/157 (20%), Positives = 56/157 (35%), Gaps = 21/157 (13%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+ ++ + ++ + S+ F ++RP + L L L
Sbjct: 57 ATQGRVECGDREAVAPVQQAPEYVDETVSLSTKTLFGFDKDNLRPEAQENLDALAQRLSN 116
Query: 79 HDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
D +EGH D +GS + AL RRA V NY V G+++S++ G+ +
Sbjct: 117 KDVQTVRVEGHTDFMGSEQYNQALSERRANVVANYLVGHGVASSKISAVGLGESQAQMTA 176
Query: 138 HDEDAYAK--------------------NRRAIVFLK 154
E AK +RR V ++
Sbjct: 177 TCEAEVAKLGKKVSKAKKRAALIACIEPDRRVDVKIR 213
>gi|256821499|ref|YP_003145462.1| OmpA/MotB domain-containing protein [Kangiella koreensis DSM 16069]
gi|256795038|gb|ACV25694.1| OmpA/MotB domain protein [Kangiella koreensis DSM 16069]
Length = 459
Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 32/105 (30%), Gaps = 5/105 (4%)
Query: 52 VFFDTSSYSIRPADIQVLSN---LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
+ F + + L + + D + G E G+ + R A
Sbjct: 355 ITFHFDEGTDELDNKAKLDIQRLVKYVEQNQLEDLFLFGFTYESGTEETDKDDSKRLARI 414
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ G+ V +G + E+ KNRR V++
Sbjct: 415 IARELEKAGVKP--FYVQGFGSKGAIASNSTENGRNKNRRVEVWV 457
>gi|254476085|ref|ZP_05089471.1| OmpA family protein [Ruegeria sp. R11]
gi|214030328|gb|EEB71163.1| OmpA family protein [Ruegeria sp. R11]
Length = 196
Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 52/145 (35%), Gaps = 9/145 (6%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG---SWL 76
D + P ++ + + G + F +S ++ P L+ L S
Sbjct: 52 ETDLGAARRLPPSGFDVAAAPLDSAPAEQGYFIRFPFNSNALTPEYEAHLARLAAVLSSA 111
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSV 135
+ + + GH D +GS ++ L RA V Y G A R++ S G++
Sbjct: 112 QLQNSCVKLVGHTDSIGSDQFNMRLSKTRAQRVAAYLALEGGVAMERIQTASLGEKHLIK 171
Query: 136 YGHDEDAYAKNRRAIVFLKGCRANT 160
+ NRR + R NT
Sbjct: 172 --GLPGPHPLNRRVEIL---ARHNT 191
>gi|167839513|ref|ZP_02466197.1| ompA family protein [Burkholderia thailandensis MSMB43]
Length = 276
Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 45/141 (31%), Gaps = 15/141 (10%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIR---PADIQVLSNLG---SWLEKHDCDFL 84
P + + ++ + F ++R PA L + +H
Sbjct: 136 PVPAVQAPPGGDVKQFTLDYPLLFPFDKSALRDLLPAGRAELDRIAAALQQQYQHIRSVR 195
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY- 143
+ G+ D LG+ + L L RA + Y RG+ + G P G
Sbjct: 196 VTGYTDRLGTDTYNRQLSLARAETIRAYLTTRGLPGDLIVAQGLGMADPVSSG-CPAGRS 254
Query: 144 -------AKNRRAIVFLKGCR 157
A +RR + + G R
Sbjct: 255 AEAIACLAPDRRVRIDVAGER 275
>gi|126736793|ref|ZP_01752530.1| OmpA/MotB [Roseobacter sp. CCS2]
gi|126713694|gb|EBA10568.1| OmpA/MotB [Roseobacter sp. CCS2]
Length = 162
Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 5/108 (4%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHD--CDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
F T S + + L ++L++ + G D++G+ +++ L +RA AV
Sbjct: 52 FRTGSSKLDERGRLDMQRLIAYLQRVPDGTEVTFVGFTDDVGAFDANQRLAEQRAAAVME 111
Query: 112 YFVARGISASR---MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
A + M YG+ PS E NRR V++
Sbjct: 112 EMRAITGGSINNVTMSTAGYGEIAPSACNISERGRGINRRVEVWISNT 159
>gi|153010830|ref|YP_001372044.1| OmpA/MotB domain-containing protein [Ochrobactrum anthropi ATCC
49188]
gi|151562718|gb|ABS16215.1| OmpA/MotB domain protein [Ochrobactrum anthropi ATCC 49188]
Length = 742
Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 8/108 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-----FLIEGHADELGSRNSSIALGLR 104
D++ F T S + + + L + + ++K F IEGH D +GS S++ L +
Sbjct: 624 DTIHFATGSAEVSLSQAKTLRKVATAMQKVLAKDPGETFFIEGHTDAVGSDRSNLVLSDK 683
Query: 105 RAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA +V + I + YG+ + + A +NRR +
Sbjct: 684 RAESVASLLTEVYEIPPENLVTQGYGERFLKI--RTQAAEQENRRVTI 729
>gi|116329294|ref|YP_799014.1| flagellar motor protein MotB [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116330099|ref|YP_799817.1| flagellar motor protein MotB [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116122038|gb|ABJ80081.1| Endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116123788|gb|ABJ75059.1| Endoflagellar motor protein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 275
Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 50/136 (36%), Gaps = 15/136 (11%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD------- 90
+ + S+ + +F+ S + + L S +++ D +EGH D
Sbjct: 112 TEDERGLIISLVSADYFNPGSAILTDSIKITLRKASSLIKELDRFVRVEGHCDANALNPG 171
Query: 91 -----ELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYG--HDEDA 142
E + ++ L RA +Y + + S + S+G P V +A
Sbjct: 172 VAPGKEERAYINNWDLAGARAINATDYIINVEKLDPSWFQAVSFGAFRPLVIEYAGTPEA 231
Query: 143 YAKNRRAIVFLKGCRA 158
A NRR + + ++
Sbjct: 232 KAYNRRIDIVVMTEKS 247
>gi|58422903|gb|AAW73251.1| OmpA [Serratia sp. MF 416]
Length = 225
Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 52/138 (37%), Gaps = 5/138 (3%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPA---DIQV 68
+ + +S + + + E ++ V F + +++P +
Sbjct: 78 GMLSVGVSYRFGQEVAAPVVAPAPAPAPVVETKKFTLTSDVLFAFNKATLKPEGQHALDQ 137
Query: 69 LSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
L S L+ D ++ G D +GS ++ L +RA +V +Y +++GI + ++
Sbjct: 138 LYTQLSSLDPKDGSVVVLGFTDAVGSAEYNLRLSEQRAQSVVDYLISKGIPSDKISARGM 197
Query: 129 GKEMPS--VYGHDEDAYA 144
GK P A
Sbjct: 198 GKANPITGDTCGYRSGRA 215
>gi|305667009|ref|YP_003863296.1| putative flagellar motor protein MotB [Maribacter sp. HTCC2170]
gi|88709244|gb|EAR01478.1| putative flagellar motor protein MotB [Maribacter sp. HTCC2170]
Length = 283
Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/146 (22%), Positives = 63/146 (43%), Gaps = 11/146 (7%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFS-SSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+++S + +L + + D E S+++ S+ D + F + SY+I ++L +
Sbjct: 120 SVNLSLVQSLKGVLGNLDDEDIEISVEKGVVFVSISDKLLFSSGSYNITSRAKEILGKVA 179
Query: 74 SW-LEKHDCDFLIEGHADELGSRN----SSIALGLRRAYAVFNYFVA-RGISASRMKVTS 127
K D +F++EGH D++ R + L +RA AV G+ RM
Sbjct: 180 KVVNNKPDFEFMVEGHTDDVPYRKGVLLDNWDLSAKRATAVVRILQNDYGVDPKRMTAAG 239
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +P +KNRR + +
Sbjct: 240 RAEFVPVSQTQ----KSKNRRTRIVV 261
>gi|332534875|ref|ZP_08410697.1| outer membrane protein [Pseudoalteromonas haloplanktis ANT/505]
gi|332035674|gb|EGI72163.1| outer membrane protein [Pseudoalteromonas haloplanktis ANT/505]
Length = 243
Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 50/121 (41%), Gaps = 1/121 (0%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADE 91
NE Q Q ++ + +V F T S I P L L + + + G AD+
Sbjct: 109 ANQNEQLTQVQINNLLAMTVQFKTGSSVIAPHFALQLDQLVTLLNNQPQLALDLSGFADQ 168
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
G +++ L R AV +Y + G+S R+ ++G++ + + +RR +
Sbjct: 169 RGDEQANLLLSKARVNAVQSYLIKHGVSHKRLSTQAFGEQQTLANSNTVEDNFFDRRVTL 228
Query: 152 F 152
Sbjct: 229 T 229
>gi|296448590|ref|ZP_06890462.1| OmpA/MotB domain protein [Methylosinus trichosporium OB3b]
gi|296253908|gb|EFH01063.1| OmpA/MotB domain protein [Methylosinus trichosporium OB3b]
Length = 454
Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 8/128 (6%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-----FL 84
+ D V SL+ S D++ FD+ S+++ P Q LS + + L + + FL
Sbjct: 311 TLDEVRASPSLRAYTRSVDIDTITFDSGSWTVAPDQAQRLSVIATALNQAIRNNPSEVFL 370
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAY 143
+EGH D GS +++L RRA +V + YG++ P V
Sbjct: 371 VEGHTDATGSDVDNLSLSDRRAQSVATLLTRDFDVPAENLTTQGYGEQYPKVDVQGPS-- 428
Query: 144 AKNRRAIV 151
+NRR V
Sbjct: 429 RENRRVTV 436
>gi|288959276|ref|YP_003449617.1| outer membrane protein [Azospirillum sp. B510]
gi|288911584|dbj|BAI73073.1| outer membrane protein [Azospirillum sp. B510]
Length = 146
Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 4/104 (3%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAV 109
V FD +S I+P VL + + + F I GH D +G +++AL RRA AV
Sbjct: 41 RVEFDFNSAVIKPESRAVLDKVAAVMTTAGTTRFRIVGHTDAVGGDAANLALSKRRAAAV 100
Query: 110 FNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
Y +R R++V+ G + A NRR +
Sbjct: 101 VEYLASRHRIQRDRLEVSGMGARELLLPDQPTA--AANRRVEII 142
>gi|218674007|ref|ZP_03523676.1| hypothetical conserved membrane protein [Rhizobium etli GR56]
Length = 50
Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 8/47 (17%), Positives = 17/47 (36%)
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ + A G+ ++K P + A NRR + ++
Sbjct: 1 TIASLLAASGVPTGQLKSQGRAATQPLAANDSREGRAANRRIEILIQ 47
>gi|319782061|ref|YP_004141537.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317167949|gb|ADV11487.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 743
Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 8/108 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWL-----EKHDCDFLIEGHADELGSRNSSIALGLR 104
D++ F+ S SI ++Q L + + + + FLIEGH D +G+ +++AL R
Sbjct: 624 DTLNFEFGSASISDTEVQKLEGVATAMEKLLKKNPAETFLIEGHTDAVGTPEANLALSDR 683
Query: 105 RAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA AV I + YG+E V + +NRR +
Sbjct: 684 RAEAVAEALTNAFGIPPENLTTQGYGEEYLKV--NTAAPNRENRRVAI 729
>gi|301156335|emb|CBW15806.1| unnamed protein product [Haemophilus parainfluenzae T3T1]
Length = 285
Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 48/121 (39%), Gaps = 10/121 (8%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGL 103
+ ++ FD ++ P +V+ N+ + L++ + G+ D LGS ++ L
Sbjct: 143 AFTLSGDFLFDFDKDTLTPRGKEVVDNVAAQLKETGAKEVKVAGYTDRLGSDAYNLDLSQ 202
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--------VYGHDEDAYAKNRRAIVFLKG 155
RRA V + G+++ + YGK ++D NRR + G
Sbjct: 203 RRANRVKARLIEDGVTSE-ITAVGYGKVPQVKACNGYKHASKAEKDCLRPNRRVEITASG 261
Query: 156 C 156
Sbjct: 262 S 262
>gi|239833809|ref|ZP_04682137.1| OmpA/MotB domain-containing protein [Ochrobactrum intermedium LMG
3301]
gi|239821872|gb|EEQ93441.1| OmpA/MotB domain-containing protein [Ochrobactrum intermedium LMG
3301]
Length = 765
Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 8/108 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-----FLIEGHADELGSRNSSIALGLR 104
D++ F T S + + + L + + ++K F IEGH D +GS S++ L +
Sbjct: 647 DTIHFATGSAEVSMSQAKTLRKVATAMQKVLAKDPGETFFIEGHTDAVGSDRSNLVLSDK 706
Query: 105 RAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA +V + I A + YG+ + + A +NRR +
Sbjct: 707 RAESVASLLTEVYDIPAENLVTQGYGERFLKI--RTQAAEQENRRVTI 752
>gi|312115743|ref|YP_004013339.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100]
gi|311220872|gb|ADP72240.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100]
Length = 789
Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 6/118 (5%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-----FL 84
S D VL +L+++ S +++ F+ S+ +RP +L + + + + FL
Sbjct: 637 SLDEVLASPNLRDRMRSVRLNTIHFEFGSWEVRPDQAPLLQGIADSVNRIVQNNPGEVFL 696
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDED 141
IEGH D +G+ +++L RRA AV + + YG++ V +
Sbjct: 697 IEGHTDAVGTDEDNLSLSDRRAQAVADVLTQYYQVPRENLVTQGYGEQFLLVPTQGPE 754
>gi|296158523|ref|ZP_06841353.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
gi|295891091|gb|EFG70879.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
Length = 359
Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 51/142 (35%), Gaps = 12/142 (8%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDT---SSYSIRPADIQVLSNLGSWLE 77
+S + + + Q ++ F ++ PA + L ++ + L+
Sbjct: 212 CTPAVQAPASTSAPVPVPAARPQQKITLKADSLFRFNGGDEAAMLPAGKRQLDDVATGLK 271
Query: 78 KHDC--DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+ I G+AD LG ++ ++ L ++RA V Y A + M G P V
Sbjct: 272 NAPALHELKITGYADRLGDKSYNLDLSMQRARTVERYLRA-HGVSLPMTAQGRGSANPLV 330
Query: 136 YGH-DE-----DAYAKNRRAIV 151
+ A NRR +
Sbjct: 331 DCRRTKRDALMQCLAPNRRVEI 352
>gi|325855004|ref|ZP_08171720.1| OmpA family protein [Prevotella denticola CRIS 18C-A]
gi|327313291|ref|YP_004328728.1| OmpA family protein [Prevotella denticola F0289]
gi|325483982|gb|EGC86922.1| OmpA family protein [Prevotella denticola CRIS 18C-A]
gi|326945391|gb|AEA21276.1| OmpA family protein [Prevotella denticola F0289]
Length = 225
Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 57/134 (42%), Gaps = 5/134 (3%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ T ++ + +++ E + + F + + + L+ + ++++
Sbjct: 80 ETAQTLPNARVDKVTDANGLECVKVTFDSGILFPLNGSKLSASAKNDLTKFAALMKRNSN 139
Query: 82 -DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHD 139
D I+G+ D G+ N ++ L RRA AV +Y RG++ ++ V +G P
Sbjct: 140 CDVAIQGYTDASGNDNINLPLSQRRAEAVSSYLKGRGVTGRQIRSVQGFGSSNPI-ENKT 198
Query: 140 EDAYAKNRRAIVFL 153
NRR V+L
Sbjct: 199 IS--QANRRVEVYL 210
>gi|260889796|ref|ZP_05901059.1| OmpA family protein [Leptotrichia hofstadii F0254]
gi|260860402|gb|EEX74902.1| OmpA family protein [Leptotrichia hofstadii F0254]
Length = 231
Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMK-VTSYGKEMPSVYGHD 139
+F+I G+ADE + + L L RA + + G ++ +T E P
Sbjct: 137 EFVIVGYADE--TEKNKKELSLSRAEKMAEFLKQNGLRKDIKISKITGKSSENPVDTNDT 194
Query: 140 EDAYAKNRRAIVFLKGCR 157
E NRR +FLK +
Sbjct: 195 EIGRYNNRRVEIFLKNGK 212
>gi|302877290|ref|YP_003845854.1| OmpA/MotB domain-containing protein [Gallionella capsiferriformans
ES-2]
gi|302580079|gb|ADL54090.1| OmpA/MotB domain protein [Gallionella capsiferriformans ES-2]
Length = 217
Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 47/139 (33%), Gaps = 15/139 (10%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FL 84
+ + + + FD ++P VL K D L
Sbjct: 74 PQQKEIPVIPEKIVPPAIVRLNAGTLFDFDRAEVKPEGKTVLDEKIVTGMKLHTDTGPLL 133
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP-SVYGHDEDAY 143
I GHAD +GS + L RRA AV +Y V +G+ A R+ V G+ P V
Sbjct: 134 IIGHADRIGSERYNQRLSERRANAVRDYLVEQGVGAQRLSVQGKGESEPDPVSNTGVSCR 193
Query: 144 -----------AKNRRAIV 151
+RR V
Sbjct: 194 GMRGERLITCLQPDRRVTV 212
>gi|163854145|ref|YP_001642188.1| OmpA/MotB domain-containing protein [Methylobacterium extorquens
PA1]
gi|163665750|gb|ABY33117.1| OmpA/MotB domain protein [Methylobacterium extorquens PA1]
Length = 717
Score = 49.0 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 61/128 (47%), Gaps = 8/128 (6%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-----FL 84
+ D V L+ + S +++ FDT S+++ P + LS + + + D FL
Sbjct: 572 TLDQVRYSPQLRARMPSVDINTITFDTGSFTVTPDQAKRLSTIAEAINRTIKDNPQEVFL 631
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAY 143
IEG+ D +GS +++L RRA +V + + YG++ V + ++A
Sbjct: 632 IEGYTDAVGSDIDNLSLSDRRAQSVASVLTQNFQVPPENLTTQGYGEQYLKV--NTQEAN 689
Query: 144 AKNRRAIV 151
+NRR IV
Sbjct: 690 RENRRVIV 697
>gi|126666113|ref|ZP_01737093.1| OmpA/MotB [Marinobacter sp. ELB17]
gi|126629435|gb|EBA00053.1| OmpA/MotB [Marinobacter sp. ELB17]
Length = 110
Score = 48.6 bits (114), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 29/78 (37%), Gaps = 7/78 (8%)
Query: 83 FLIEGHADELGS-------RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
I+GH+D ++ L RA + GI SRM+ + P V
Sbjct: 14 ISIQGHSDSRSIAPALQSLYPTNWELSASRAASAVRVLREAGIDPSRMQAVGFADARPLV 73
Query: 136 YGHDEDAYAKNRRAIVFL 153
D + KNRR V L
Sbjct: 74 KEIDTVSRRKNRRIEVLL 91
>gi|153952261|ref|YP_001398613.1| flagellar motor protein MotB [Campylobacter jejuni subsp. doylei
269.97]
gi|152939707|gb|ABS44448.1| putative chemotaxis protein MotB [Campylobacter jejuni subsp.
doylei 269.97]
Length = 247
Score = 48.6 bits (114), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 44/125 (35%), Gaps = 6/125 (4%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSI-RPADIQVLSNLGS--WLEKHDCDFLIEGHADELGSR 95
Q + ++ V F+ SS I L + I G+ D S
Sbjct: 108 QSDNQIALNLPSKVEFERSSAQIVSADIQDYLKRMAELTTYLPPQAKIEIRGYTDNSDSI 167
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
S L +RA V YF+ G + + + SYG P + A N R ++ K
Sbjct: 168 IRSYELAYQRAENVLKYFIEGGANLKNISIKSYGLNNPI--NGNPQALENN-RVEIYFKV 224
Query: 156 CRANT 160
A+T
Sbjct: 225 DTADT 229
>gi|298565977|dbj|BAJ09608.1| hypothetical protein [Pasteurella pneumotropica]
Length = 289
Score = 48.6 bits (114), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 44/145 (30%), Gaps = 13/145 (8%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIR---PADIQVLSNLGSWLEKHD 80
+ + S S+ S F + P + + +++
Sbjct: 146 KENQTLSRVPSPANCGAAVLAVESLDASALFGFNKSGYNDILPNGKEKIREFADKVKEMP 205
Query: 81 C--DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY-G 137
L+ GH D +GS + L +RA V + ++ ++ YGK P V
Sbjct: 206 SISKILVSGHTDPIGSTAYNQTLSQKRANTVKLAL-QKAGVSTPIEAVGYGKAEPVVTTC 264
Query: 138 HD------EDAYAKNRRAIVFLKGC 156
NRR + + G
Sbjct: 265 DTYKDAQRNQCNQPNRRVEIAVYGK 289
>gi|290955106|ref|YP_003486288.1| lipoprotein [Streptomyces scabiei 87.22]
gi|260644632|emb|CBG67717.1| putative lipoprotein [Streptomyces scabiei 87.22]
Length = 393
Score = 48.6 bits (114), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/161 (21%), Positives = 55/161 (34%), Gaps = 19/161 (11%)
Query: 11 SAITMMSISGIDNLD---------TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSI 61
+ + D ++ P + + + + V SV F +
Sbjct: 225 AVCAASGAASCTVRDDDVPRLPSASQRPVPVVPVGATPTSCKGTYVVPASVTFTADDARL 284
Query: 62 RPADIQVLSNLGSWLEKHDCDF--LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
P + L + LE+ D I GH +G+ S AL RRA AV V G+S
Sbjct: 285 APGADRYLRPVADSLERCGTDVVVTITGHTARVGAGASGFALSGRRARAVSERLVRLGVS 344
Query: 120 ASRM-KVTSYGKEMPSVYG------HDEDAYAKNRRAIVFL 153
+ + V G P V + A +NRR + +
Sbjct: 345 PALIGSVEGVGSTRPRVDNMPGGVFAERLAR-QNRRVEITV 384
>gi|23013938|ref|ZP_00053784.1| COG1360: Flagellar motor protein [Magnetospirillum magnetotacticum
MS-1]
Length = 218
Score = 48.6 bits (114), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 46/141 (32%), Gaps = 13/141 (9%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG---SWLEKHDCD 82
+ + ++ + ++ F S +RP + ++ + +
Sbjct: 75 VTGAGVEDTVDVGRDDKGIVLNLASGTMFKPGSAEVRPEILPLMKEISATLKQERFLNYQ 134
Query: 83 FLIEGHADELG----SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
I+GH D+ S+ L RA + GI +RMK+ + P V
Sbjct: 135 IDIQGHTDDTPVRTPQFPSNWDLSAARALSTLKVMNELGIPTNRMKLAALADTAPRVPNR 194
Query: 139 D------EDAYAKNRRAIVFL 153
+ A NRR + +
Sbjct: 195 SDTGKAYPENQAINRRVEIHI 215
>gi|114706993|ref|ZP_01439892.1| hypothetical protein FP2506_03039 [Fulvimarina pelagi HTCC2506]
gi|114537543|gb|EAU40668.1| hypothetical protein FP2506_03039 [Fulvimarina pelagi HTCC2506]
Length = 710
Score = 48.6 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 51/128 (39%), Gaps = 8/128 (6%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-----WLEKHDCDFL 84
S D V ++++ +++ F S I + L L + D F+
Sbjct: 569 SVDEVRRSKRIRDKVRRIDLNTINFGFGSAEISQEQVSNLEALAQAISEVIDQNPDETFI 628
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAY 143
IEGH D +G+ +++ L +RA V + YG++ V D++
Sbjct: 629 IEGHTDAVGTDLANLKLSDQRAETVAAALTNFFDVPPENLITQGYGEQFLKVDTQDQN-- 686
Query: 144 AKNRRAIV 151
A+NRR V
Sbjct: 687 AENRRVTV 694
>gi|323492326|ref|ZP_08097479.1| chemotaxis LafU protein [Vibrio brasiliensis LMG 20546]
gi|323313373|gb|EGA66484.1| chemotaxis LafU protein [Vibrio brasiliensis LMG 20546]
Length = 330
Score = 48.6 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/153 (16%), Positives = 56/153 (36%), Gaps = 11/153 (7%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSN 71
+ +++ + + SS +N + + + D F + P +L
Sbjct: 129 LAALAKVIEEAVRQSSAQGNVNVTVTPQGLRVVLQDDYKQHMFSRGGAELTPFFEDLLLA 188
Query: 72 LGSWLEKHDCDFLIEGHADELGSRNS-----SIALGLRRAYAVFNYFVARGISASR-MKV 125
L ++ +I GH D ++ + L RA V+ G+ R ++V
Sbjct: 189 LAPVFKRVVNPIIISGHTDSTQFKHRFKQASNWELSASRANVARVTLVSGGMPDERVLQV 248
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
T + + D ++ ++NRR +F+ A
Sbjct: 249 TGM-SDRALLNNDDPES-SENRRIELFVLTTPA 279
>gi|170726476|ref|YP_001760502.1| OmpA/MotB domain-containing protein [Shewanella woodyi ATCC 51908]
gi|169811823|gb|ACA86407.1| OmpA/MotB domain protein [Shewanella woodyi ATCC 51908]
Length = 238
Score = 48.6 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 51/117 (43%), Gaps = 1/117 (0%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRN 96
+ Q+ ++G ++ F T S + P + L +L + + + G+AD G
Sbjct: 111 AQDQKLTELAMGLNIQFKTGSSELAPHIKRQLDDLAYAITISPELRLDMTGYADRRGDST 170
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ AL +R V +Y V++G+ SR+ ++G P + +RR + L
Sbjct: 171 YNQALSEQRVAEVKSYLVSQGVDESRLSYKAFGASAPLTEDQSFENDFFDRRVNIKL 227
>gi|21672596|ref|NP_660663.1| outer membrane protein A precursor [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
gi|25090843|sp|Q8K9L4|OMPA_BUCAP RecName: Full=OmpA-like protein; Flags: Precursor
gi|21623226|gb|AAM67874.1| outer membrane protein A precursor [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 347
Score = 48.6 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 54/132 (40%), Gaps = 20/132 (15%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGS 94
++ ++ +++ F +S ++P L L ++ ++ GHAD +G+
Sbjct: 217 PQSSDKQYVALNENINFPFNSTELKPISHDKLQKLQKEIKNIKSKNIFIMLSGHADRIGN 276
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG-------------KEMPSVYGHDED 141
+ + L RAY++ NYF + GIS ++ + G + P +
Sbjct: 277 KEYNQKLSENRAYSIKNYFTSHGISQDKISIQGMGNEFSLTNQICKDVSDRPLLI----S 332
Query: 142 AYAKNRRAIVFL 153
A +RR + +
Sbjct: 333 CLAPDRRVEIEV 344
>gi|159184962|ref|NP_354858.2| OmpA family protein [Agrobacterium tumefaciens str. C58]
gi|159140240|gb|AAK87643.2| OmpA family protein [Agrobacterium tumefaciens str. C58]
Length = 746
Score = 48.6 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 8/108 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-----LEKHDCDFLIEGHADELGSRNSSIALGLR 104
D++ F T S I A + L + + FLIEGH D +GS S++ L
Sbjct: 628 DTITFATGSADIPMAQARSLRKVADAINKALQKNPAETFLIEGHTDAVGSDESNLVLSDE 687
Query: 105 RAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA +V N GI + YG+ V + +NRR +
Sbjct: 688 RAASVANVLTDVYGIPPENLATQGYGERYLKVQTLGPE--QQNRRVTI 733
>gi|310818068|ref|YP_003950426.1| chemotaxis MotB protein [Stigmatella aurantiaca DW4/3-1]
gi|309391140|gb|ADO68599.1| chemotaxis MotB protein [Stigmatella aurantiaca DW4/3-1]
Length = 284
Score = 48.6 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 43/143 (30%), Gaps = 10/143 (6%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL-GSWLEKH 79
L +++ D L+ + +F + ++ P +VL+
Sbjct: 112 TAKLKEELTRGDAWLDAIGTEALRLELSERLLF-EPGQSNLTPRGTEVLARAGAVLAAVE 170
Query: 80 DCDFLIEGHADELG------SRNSSIALGLRRAYAVFNYFVARGIS--ASRMKVTSYGKE 131
+ H DEL + +S L RA V R+ T +
Sbjct: 171 GHTVEVAAHTDELPVPAEAETEGTSWELSTARAATVVRALHEGPARLAQERLSATGHASF 230
Query: 132 MPSVYGHDEDAYAKNRRAIVFLK 154
P V +NRR + L+
Sbjct: 231 RPVVPSDSPVNRLRNRRVTLMLR 253
>gi|86358030|ref|YP_469922.1| OmpA family membrane protein [Rhizobium etli CFN 42]
gi|86282132|gb|ABC91195.1| putative outer membrane protein, OmpA family [Rhizobium etli CFN
42]
Length = 738
Score = 48.6 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 8/108 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-----FLIEGHADELGSRNSSIALGLR 104
D++ F T S I + L + + + FLIEGH D +GS S++ L +
Sbjct: 619 DTITFATGSAEIPMTQARTLRKVADAINQVLKKDPSETFLIEGHTDAVGSDQSNLVLSDQ 678
Query: 105 RAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA +V N GI M YG+ V + +NRR +
Sbjct: 679 RAESVANVLSDVYGIPPENMATQGYGERYLKV--NTPGPEQENRRVTI 724
>gi|163731712|ref|ZP_02139159.1| hypothetical protein RLO149_20449 [Roseobacter litoralis Och 149]
gi|161395166|gb|EDQ19488.1| hypothetical protein RLO149_20449 [Roseobacter litoralis Och 149]
Length = 344
Score = 48.6 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 30/78 (38%), Gaps = 9/78 (11%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYF---------VARGISASRMKVTSYGKEMP 133
IEGH D GS N++++L +RA + + V YG++ P
Sbjct: 241 LQIEGHTDSDGSANANVSLSSQRAATTYGAMISHQPGLNIHQNFTDQPVLSVAGYGEDRP 300
Query: 134 SVYGHDEDAYAKNRRAIV 151
+ + NRR +
Sbjct: 301 VTLNSSPEGKSANRRIDL 318
>gi|148653764|ref|YP_001280857.1| OmpA/MotB domain-containing protein [Psychrobacter sp. PRwf-1]
gi|148572848|gb|ABQ94907.1| OmpA/MotB domain protein [Psychrobacter sp. PRwf-1]
Length = 213
Score = 48.6 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 45/140 (32%), Gaps = 6/140 (4%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
N + S L ++ S F+DT+S I+ + L ++++
Sbjct: 58 ECPNTPQNMVVDPNGCPASLLPKEGSVRAEFRAFYDTNSSEIKSKYREELDRWAKKMDEY 117
Query: 80 DCDFLIEGHADELGSRNSSIALGLR-----RAYAVFNYFVARGI-SASRMKVTSYGKEMP 133
+++ + R + NY + + +R++ +Y E P
Sbjct: 118 PDAYMLIEAHISEPEARLEENASHQTLALSRVEGIKNYLIQKHNIDPNRIRTYTYSAERP 177
Query: 134 SVYGHDEDAYAKNRRAIVFL 153
D + N+R +
Sbjct: 178 IAPNDDAEGIKLNQRVYAVI 197
>gi|256829772|ref|YP_003158500.1| OmpA/MotB domain-containing protein [Desulfomicrobium baculatum DSM
4028]
gi|256578948|gb|ACU90084.1| OmpA/MotB domain protein [Desulfomicrobium baculatum DSM 4028]
Length = 300
Score = 48.6 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/107 (25%), Positives = 42/107 (39%), Gaps = 8/107 (7%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE-----LGSRNSSIALGLRRAY 107
FFD++S + VL + + +EGH D SR ++ L RA
Sbjct: 150 FFDSASSQLTGDARNVLKVIADTVRDLPNQIAVEGHTDAVPLGGPSSRYTNWELSTDRAS 209
Query: 108 AVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ G+ RM +V Y P + + ED +NRR + L
Sbjct: 210 SARVILEEFGLDPKRMVRVAGYAATQPLIRENPED--PRNRRVSILL 254
>gi|254427536|ref|ZP_05041243.1| OmpA family protein [Alcanivorax sp. DG881]
gi|196193705|gb|EDX88664.1| OmpA family protein [Alcanivorax sp. DG881]
Length = 212
Score = 48.6 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/149 (15%), Positives = 55/149 (36%), Gaps = 9/149 (6%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
+ + ++ + + + + ++ V F S + A L
Sbjct: 60 AVPACDVAITGEPVAEREEEPSTAEVAPDIAAPEPLRVTFAFDSAVLTDASRIALKAWYQ 119
Query: 75 WLEKHDCDFLI-EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
+ + ++ G++D LG ++AL RRA AV ++ +G + + V +G++
Sbjct: 120 EVASLEGPVVVVNGYSDPLGGAAYNLALAERRAQAVAQWWRQQGEGIADVTVIGHGEDHS 179
Query: 134 S------VYGHDE--DAYAKNRRAIVFLK 154
D + ++RR + +K
Sbjct: 180 VTGDRCKALRGDALKQCHQQDRRVQLLVK 208
>gi|257464878|ref|ZP_05629249.1| Plp4 [Actinobacillus minor 202]
gi|257450538|gb|EEV24581.1| Plp4 [Actinobacillus minor 202]
Length = 255
Score = 48.6 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 47/120 (39%), Gaps = 9/120 (7%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSI 99
E + V FD S + + +SN+ ++ + ++G D LGS + ++
Sbjct: 136 AENKVFDLSADVLFDFDSSVLTEEGKREVSNIALKLRQQQATNITVKGWTDRLGSDSYNL 195
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED------AYAKNRRAIVFL 153
L RA AV + G++ +K GK H+ED NR+ V +
Sbjct: 196 NLSQLRAEAVKTELLNNGLN-ISIKAQGKGKLDLVA-CHNEDYEELKQCLKPNRKVEVLV 253
>gi|187918041|ref|YP_001883604.1| outer membrane protein [Borrelia hermsii DAH]
gi|119860889|gb|AAX16684.1| outer membrane protein [Borrelia hermsii DAH]
Length = 385
Score = 48.6 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 50/115 (43%), Gaps = 3/115 (2%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSI 99
+ + + + F S+ I + L ++ + + + + LIEGH + + +
Sbjct: 269 KNENGIKLSLDIEFYPDSFQIIQKEYSKLKHIANLLEKFKNNNILIEGHTAKFETEQAMQ 328
Query: 100 ALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L +RA+++ NY + + +++ +G + P A +KNRR + +
Sbjct: 329 ELSEKRAHSIGNYLLKMKVKNKNQIFFKGWGAKKPKYASSSPLA-SKNRRVEITI 382
>gi|261378312|ref|ZP_05982885.1| OmpA family protein [Neisseria cinerea ATCC 14685]
gi|269145408|gb|EEZ71826.1| OmpA family protein [Neisseria cinerea ATCC 14685]
Length = 257
Score = 48.6 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/155 (19%), Positives = 56/155 (36%), Gaps = 22/155 (14%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
++ D +P + ++ S+ F +R + L+ L L + +
Sbjct: 62 VECGDAAPQAPTVIEQAPQYVDET-VSLSAKTLFGFDKDVLRVEAQENLNVLAQRLGQTN 120
Query: 81 CD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+EGH D +G+ + L RRA V NY V RG+ A+++ G+ +
Sbjct: 121 VQAVRVEGHTDFMGAEKYNQELSERRANVVANYLVGRGVPAAKISAAGLGESQAQMTQAC 180
Query: 140 EDAYAK--------------------NRRAIVFLK 154
E AK +RR + ++
Sbjct: 181 EAEVAKLGAKVSKAKKREALIACIEPDRRVDIKIR 215
>gi|116255792|ref|YP_771625.1| putative outer membrane protein [Rhizobium leguminosarum bv. viciae
3841]
gi|115260440|emb|CAK03544.1| putative outer membrane protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 649
Score = 48.6 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 41/111 (36%), Gaps = 7/111 (6%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLR 104
S+ + FD + S + L L++ ++ GH D G + + L R
Sbjct: 536 VSIPVPITFDFNKSSFTSIGTEAAQELLEALKEQKPGRIILVGHTDRRGGDDYNQKLSER 595
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE-----DAYAKNRRAI 150
RA AV ++ + G+ A+ + G P D A NRR
Sbjct: 596 RAQAVADFLKSNGLDAT-IDAEGRGASEPVDVTATANLTEDDVDALNRRVE 645
>gi|86160426|ref|YP_467211.1| OmpA/MotB family outer membrane protein [Anaeromyxobacter
dehalogenans 2CP-C]
gi|85776937|gb|ABC83774.1| outer membrane protein, OmpA/MotB family [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 359
Score = 48.6 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 23/70 (32%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
+E D + L A A G++A+R+ YG E P +
Sbjct: 285 VRVEAFVDATADAVADQRLTQAMADAATGRLRELGVAAARLTGVGYGGERPLLPNFTVRG 344
Query: 143 YAKNRRAIVF 152
NRR +
Sbjct: 345 RTANRRLEIV 354
>gi|226226461|ref|YP_002760567.1| hypothetical protein GAU_1055 [Gemmatimonas aurantiaca T-27]
gi|226089652|dbj|BAH38097.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
Length = 531
Score = 48.6 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 34/186 (18%), Positives = 62/186 (33%), Gaps = 29/186 (15%)
Query: 4 STIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVG----DSVFFDTSSY 59
++I + + + +G + ++ + + E + D+ F
Sbjct: 328 NSIASVNNGTVTCNAAGTTTITVSKTAHGATKTQQATVECKALPAARVAFDTTLFSFDRA 387
Query: 60 SIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA--- 115
+ A L + ++ + IEGH D GS + L RA AV+ +
Sbjct: 388 VVLKAGNDTLKVIVDVMKANPSIRISIEGHTDWYGSEAYNNKLAKSRAEAVYKQLLKVAG 447
Query: 116 --RGISASRMKVTSYGKEMPSV-YGHDED----------------AYAKNRRAIVF--LK 154
R+ +S+G++ V G E A A NRR ++ L
Sbjct: 448 TDADAIKGRVVWSSFGEQCILVRDGDTEQEPPPANRSRISDANRRAQAANRRVEIWQQLD 507
Query: 155 GCRANT 160
G A T
Sbjct: 508 GQNAPT 513
>gi|257057431|ref|YP_003135263.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Saccharomonospora viridis DSM 43017]
gi|256587303|gb|ACU98436.1| outer membrane protein/peptidoglycan-associated (lipo)protein
[Saccharomonospora viridis DSM 43017]
Length = 223
Score = 48.6 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 48/140 (34%), Gaps = 8/140 (5%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDS-VFFDTSSYSIRPADIQVLSNLGS---- 74
++ K +S ++ LQ ++ D+ + F S ++ A Q + N+
Sbjct: 87 SVEIAAPKSASEPHTERKAGLQRGIDEALADTPITFAADSANLDAAGRQAVKNVADLLTE 146
Query: 75 WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
+ S+ L RA AV V G+S R++ YG P
Sbjct: 147 APTDWRFEIAGHVARVPGAEPESARKLSYERAEAVAEELVKSGLSPDRVEPVGYGATRPL 206
Query: 135 VYGHDEDAYAKNRRAIVFLK 154
+ +RR + ++
Sbjct: 207 SDSGTS---SIDRRVEITVR 223
>gi|170741408|ref|YP_001770063.1| OmpA/MotB domain-containing protein [Methylobacterium sp. 4-46]
gi|168195682|gb|ACA17629.1| OmpA/MotB domain protein [Methylobacterium sp. 4-46]
Length = 441
Score = 48.6 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/140 (17%), Positives = 47/140 (33%), Gaps = 9/140 (6%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSNLGSWLEK 78
+P + E S+ D + F+ S + ++ L + L
Sbjct: 300 AVQPLATGAPAPKVEVRRTGEGTLISITDELNFSMFNVGSAEPQAKVVKALERIAKVLSS 359
Query: 79 HDCDFLIEGHADELGSR---NSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPS 134
++ GH D + + L RA + G++ R+ ++ + P
Sbjct: 360 RPGQIVLRGHTDARPFKSESYDNWRLSSARAQMAAYMLIRGGVAERRIVRIEGHADRQPR 419
Query: 135 VYGHDEDAYAKNRRAIVFLK 154
D A A+NRR + L+
Sbjct: 420 NP-SDPMA-AENRRIEILLR 437
>gi|257091687|ref|YP_003165328.1| OmpA/MotB domain-containing protein [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257044211|gb|ACV33399.1| OmpA/MotB domain protein [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 202
Score = 48.6 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 48/119 (40%), Gaps = 4/119 (3%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSR 95
+ + +++V + F S +I PA L + L ++EGH D G+
Sbjct: 83 AALPPDVRATAVQFPIQFRPGSANITPASGNTLIEIAKILSLTPDRCIIVEGHTDAEGNA 142
Query: 96 NSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ ++AL RA +V + +G + R+ G P D+ NRR + +
Sbjct: 143 DRNMALSRDRANSVVKFISDKGAVERRRLVPVGKGSTDPLKDLDPRDSR--NRRVVFKV 199
>gi|291615400|ref|YP_003525557.1| OmpA/MotB domain protein [Sideroxydans lithotrophicus ES-1]
gi|291585512|gb|ADE13170.1| OmpA/MotB domain protein [Sideroxydans lithotrophicus ES-1]
Length = 204
Score = 48.6 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA 115
+ I +++++ + + + ++ GHA G ++++L ++RA V + VA
Sbjct: 106 DGAKLTAESINMIADIRQEITRRAAPEVVVTGHASRAGMDETNLSLSMQRAKVVRDVLVA 165
Query: 116 RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G+ A ++V G+ P+ D A +RR + ++
Sbjct: 166 GGVPAQIIQVVGRGEFDPAATTQDGVAGPPSRRVEITVR 204
>gi|241667092|ref|YP_002985176.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240862549|gb|ACS60214.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 652
Score = 48.6 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 40/111 (36%), Gaps = 7/111 (6%)
Query: 46 SSVGDSVFFDTSSYSIRP-ADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLR 104
S+ + FD + S L + E+ ++ GH D G + + L R
Sbjct: 539 VSIPVPITFDFNKSSFTSIGTEAAEELLEALKEQKPGRIILIGHTDRRGGDDYNQKLSER 598
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE-----DAYAKNRRAI 150
RA AV ++ + G+ A+ + G P D A NRR
Sbjct: 599 RAQAVADFLKSNGLDAT-IDAEGRGASEPVDVTATANLTEDDVDALNRRVE 648
>gi|124005287|ref|ZP_01690128.1| OmpA family protein [Microscilla marina ATCC 23134]
gi|123989109|gb|EAY28687.1| OmpA family protein [Microscilla marina ATCC 23134]
Length = 436
Score = 48.6 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 7/106 (6%)
Query: 52 VFFDTSSYSIRPADIQVLSNLG---SWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
V+F + Q L + D + + G AD +G+ ++ L +RA A
Sbjct: 32 VYFAYKQSELSAKAKQKLDQTFARLYRKQVLDYEVTLTGLADSVGNVAANHQLANKRALA 91
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
V Y +A+G+ A ++ V G+ ++ED + +NRR + L+
Sbjct: 92 VKTYLIAQGVGADKVTVKVLGER----PANNEDEHRRNRRVEIVLR 133
>gi|90581709|ref|ZP_01237497.1| hypothetical protein VAS14_19366 [Vibrio angustum S14]
gi|90437124|gb|EAS62327.1| hypothetical protein VAS14_19366 [Vibrio angustum S14]
Length = 261
Score = 48.6 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 46/123 (37%), Gaps = 2/123 (1%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHAD 90
+E L+E+F + F + ++ P + L L++ + G+ D
Sbjct: 115 QPNYSEVELKERFLLYMEVDNQFALNKSTLLPKYRESLRYAAEILKRQSHWHLQLTGYTD 174
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + LGL RA AV + + G+ +++ V S G+ NR+
Sbjct: 175 SQGHIQGNYMLGLERANAVKDSLIENGVDPNQISVFSVGENQAVADN-TLTQQLNNRKVE 233
Query: 151 VFL 153
+
Sbjct: 234 ARV 236
>gi|216263832|ref|ZP_03435826.1| outer membrane protein [Borrelia afzelii ACA-1]
gi|215979876|gb|EEC20698.1| outer membrane protein [Borrelia afzelii ACA-1]
Length = 389
Score = 48.6 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 45/111 (40%), Gaps = 3/111 (2%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGL 103
++ + F S+ I + + L + + + LIEGH ++ G L
Sbjct: 277 GINLSLDIEFYPDSFQILQKEYKKLDLIAKLLEKFKKNNILIEGHTEQFGLEEEMHELSE 336
Query: 104 RRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+RA A+ NY + + + ++ +G + P AKNRR + +
Sbjct: 337 KRARAIGNYLIKMKIKNKDQILFKGWGSQKPKYPKSSPL-KAKNRRVEITI 386
>gi|111114988|ref|YP_709606.1| outer membrane protein [Borrelia afzelii PKo]
gi|110890262|gb|ABH01430.1| outer membrane protein [Borrelia afzelii PKo]
Length = 389
Score = 48.6 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 45/111 (40%), Gaps = 3/111 (2%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGL 103
++ + F S+ I + + L + + + LIEGH ++ G L
Sbjct: 277 GINLSLDIEFYPDSFQILQKEYKKLDLIAKLLEKFKKNNILIEGHTEQFGLEEEMHELSE 336
Query: 104 RRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+RA A+ NY + + + ++ +G + P AKNRR + +
Sbjct: 337 KRARAIGNYLIKMKIKNKDQILFKGWGSQKPKYPKSSPL-KAKNRRVEITI 386
>gi|84514866|ref|ZP_01002229.1| OmpA domain protein [Loktanella vestfoldensis SKA53]
gi|84511025|gb|EAQ07479.1| OmpA domain protein [Loktanella vestfoldensis SKA53]
Length = 531
Score = 48.6 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 39/108 (36%), Gaps = 7/108 (6%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGLRRAYAVF 110
F S + + L + + D L+ G+ D +G S++AL +RA V
Sbjct: 417 FALGSSRLDARAQDDILRLANLIATSDISNKELLLIGYTDAIGDGASNLALSQQRAEEVR 476
Query: 111 NYFV----ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ ++ +G+ P + NRR V+L+
Sbjct: 477 QALFAVAPSLASDDLPVRALGFGEISPLSCNETANGRRINRRVEVWLR 524
>gi|261856832|ref|YP_003264115.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
gi|261837301|gb|ACX97068.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
Length = 373
Score = 48.3 bits (113), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 45/128 (35%), Gaps = 12/128 (9%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIA 100
++ FD + ++PA + L L L D ++ GH D +GS ++
Sbjct: 246 APKKVTLSADSLFDFNKSVVKPAGKRALDQLARDLNGTDYDQIMVIGHTDRIGSHAYNLK 305
Query: 101 LGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPS----------VYGHDEDAYAKNRRA 149
L RRA AV +Y ++ G ++ P +RR
Sbjct: 306 LSTRRAEAVKDYLISSGQIPAHKISAKGVDGADPVTKPGDCVGSKATPALIACLQPDRRV 365
Query: 150 IVFLKGCR 157
V + G +
Sbjct: 366 EVDVSGTK 373
>gi|203287626|ref|YP_002222641.1| outer membrane protein [Borrelia recurrentis A1]
gi|201084846|gb|ACH94420.1| outer membrane protein [Borrelia recurrentis A1]
Length = 385
Score = 48.3 bits (113), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
+ F S+ I + L ++ + + D + LIEGH + G+ L +RA+ +
Sbjct: 279 DIEFYPDSFQIIRKEHNKLKHIANLLEKFQDNNILIEGHTAKFGTEQEMQELSEKRAHTI 338
Query: 110 FNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
NY + + +++ +G + P A +KNRR + +
Sbjct: 339 GNYLLKMKVKNKNQIFFKGWGAKKPKYVSSSPLA-SKNRRVEITI 382
>gi|203284088|ref|YP_002221828.1| outer membrane protein [Borrelia duttonii Ly]
gi|201083531|gb|ACH93122.1| outer membrane protein [Borrelia duttonii Ly]
Length = 385
Score = 48.3 bits (113), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 46/105 (43%), Gaps = 3/105 (2%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
+ F S+ I + L ++ + + D + LIEGH + G+ L +RA+ +
Sbjct: 279 DIEFYPDSFQIIRKEHNKLKHIANLLEKFQDNNILIEGHTAKFGTEQEMQELSEKRAHTI 338
Query: 110 FNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
NY + + +++ +G + P A +KNRR + +
Sbjct: 339 GNYLLKMKVKNKNQIFFKGWGAKKPKYVSSSPLA-SKNRRVEITI 382
>gi|300776671|ref|ZP_07086529.1| OmpA family protein [Chryseobacterium gleum ATCC 35910]
gi|300502181|gb|EFK33321.1| OmpA family protein [Chryseobacterium gleum ATCC 35910]
Length = 886
Score = 48.3 bits (113), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 9/119 (7%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIA 100
+ ++++ S I VL+N+ +L E D + G+A +G N +
Sbjct: 311 AALQEHIQRTIYYKFDSTVIDKDGEAVLNNVLKFLLEHKDSTMNLSGYACVIGKENYNKG 370
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG--------HDEDAYAKNRRAIV 151
L +RA V +F G+ R+ G+ P+ +E Y NRR +
Sbjct: 371 LSQKRADVVKKFFADGGLDPRRIISVGKGEVDPTDDKMGRDNIKYKNEKDYENNRRVDI 429
>gi|332293580|ref|YP_004432189.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332171666|gb|AEE20921.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 368
Score = 48.3 bits (113), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 7/109 (6%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSW--LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
+ ++T+S ++ PA ++ + I H D G+ +S+ L RRA +V
Sbjct: 257 INWNTNSATLTPAAKSIIDTRLMPLLAQNPGVKLEIASHTDSRGASSSNQDLSERRAQSV 316
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGH-----DEDAYAKNRRAIVFL 153
NY +++G++ S + +G+ E +A NRR L
Sbjct: 317 ANYLISKGVNNSLLVANGFGERKLKNRCADGVSCTERQHADNRRTEFRL 365
>gi|325277486|ref|ZP_08143089.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51]
gi|324097373|gb|EGB95616.1| OmpA/MotB domain-containing protein [Pseudomonas sp. TJI-51]
Length = 435
Score = 48.3 bits (113), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 44/115 (38%), Gaps = 5/115 (4%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH---DCDFLIEGHADELGSRNSS 98
+ + + + F S ++ ++ + + +L + ++ G D + +
Sbjct: 322 AKQAQRLSVNFRFQAGSANLDNKALRDVRRVADYLHQAGKLQGKTVLVGFGDPKLTPGRA 381
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA AV G++ ++VT G E+P E N+R V++
Sbjct: 382 ALLSRLRAQAVRRQLARNGVAV--LQVTGMGAELPVAGNEREQGRLHNQRVEVWV 434
>gi|86148944|ref|ZP_01067176.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|88597451|ref|ZP_01100686.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
jejuni 84-25]
gi|218561995|ref|YP_002343774.1| flagellar motor protein MotB [Campylobacter jejuni subsp. jejuni
NCTC 11168]
gi|85840302|gb|EAQ57559.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
jejuni CF93-6]
gi|88190512|gb|EAQ94486.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
jejuni 84-25]
gi|112359701|emb|CAL34487.1| putative flagellar motor protein [Campylobacter jejuni subsp.
jejuni NCTC 11168]
gi|284925608|gb|ADC27960.1| flagellar motor protein MotB [Campylobacter jejuni subsp. jejuni
IA3902]
gi|315927861|gb|EFV07186.1| ompA family protein [Campylobacter jejuni subsp. jejuni DFVF1099]
gi|315928678|gb|EFV07961.1| ompA family protein [Campylobacter jejuni subsp. jejuni 305]
Length = 247
Score = 48.3 bits (113), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 42/125 (33%), Gaps = 6/125 (4%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSI-RPADIQVLSNLGS--WLEKHDCDFLIEGHADELGSR 95
Q + ++ V F+ S I L + I G+ D S
Sbjct: 108 QSDNQVALNLPSKVEFERGSAQIVSADIQDYLKRMAELTTYLPPQAKIEIRGYTDNSDSI 167
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
S L +RA V YF+ G + + + SYG P + N R ++ K
Sbjct: 168 IRSYELAYQRAENVLKYFIEGGANLKNISIKSYGLNNPI--NGNPQTLENN-RVEIYFKV 224
Query: 156 CRANT 160
A+T
Sbjct: 225 DTADT 229
>gi|283955187|ref|ZP_06372689.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
jejuni 414]
gi|283793400|gb|EFC32167.1| chemotaxis protein MotB, putative [Campylobacter jejuni subsp.
jejuni 414]
Length = 247
Score = 48.3 bits (113), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 42/125 (33%), Gaps = 6/125 (4%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSI-RPADIQVLSNLGS--WLEKHDCDFLIEGHADELGSR 95
Q + ++ V F+ S I L + I G+ D S
Sbjct: 108 QSDNQIALNLPSKVEFERGSAQIVSADIQDYLKRMAELTTYLPPQAKIEIRGYTDNSDSI 167
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
S L +RA V YF+ G + + + SYG P + N R ++ K
Sbjct: 168 LRSYELAYQRAENVLKYFIEGGANLKNISIKSYGLNNPI--NGNPQTLENN-RVEIYFKV 224
Query: 156 CRANT 160
A+T
Sbjct: 225 DTADT 229
>gi|89094116|ref|ZP_01167059.1| probable signal peptide protein [Oceanospirillum sp. MED92]
gi|89081591|gb|EAR60820.1| probable signal peptide protein [Oceanospirillum sp. MED92]
Length = 198
Score = 48.3 bits (113), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 41/115 (35%), Gaps = 9/115 (7%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
V+FD S + K + GHAD +G+ + AL +R A
Sbjct: 87 KHIVYFDFDSSNPGDVSDIADYI---KSLKEVNSVNLVGHADRIGASAYNDALSQKRVNA 143
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDE------DAYAKNRRAIVFLKGCR 157
V + G+S S + G+ P+ + D NRR V + G +
Sbjct: 144 VSDALQGAGVSGSAISTGYMGENAPAKSCDGQRGTNLIDCLRANRRVEVEISGKK 198
>gi|325293279|ref|YP_004279143.1| outer membrane protein, OmpA family protein [Agrobacterium sp.
H13-3]
gi|325061132|gb|ADY64823.1| putative outer membrane protein, OmpA family protein [Agrobacterium
sp. H13-3]
Length = 771
Score = 48.3 bits (113), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 45/108 (41%), Gaps = 8/108 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-----FLIEGHADELGSRNSSIALGLR 104
D++ F T S I A + L + + K FLIEGH D +GS S++ L
Sbjct: 653 DTITFATGSADIPMAQARSLRKVADAINKALAKNPAETFLIEGHTDAVGSDESNLVLSDE 712
Query: 105 RAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA +V N GI + YG+ V + +NRR +
Sbjct: 713 RAASVANVLTDVYGIPPENLATQGYGERYLKVQTLGPE--QQNRRVTI 758
>gi|163755163|ref|ZP_02162283.1| peptidoglycan-associated cytoplasmic membrane protein [Kordia
algicida OT-1]
gi|161324583|gb|EDP95912.1| peptidoglycan-associated cytoplasmic membrane protein [Kordia
algicida OT-1]
Length = 139
Score = 48.3 bits (113), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/152 (13%), Positives = 56/152 (36%), Gaps = 16/152 (10%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ +I++ ++ + KI L F +++S
Sbjct: 1 MKNLKYIVIVTCFFLVGKVFSQDHSQKIQELSAQLK----------------FKNSASLE 44
Query: 61 IRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA 120
++ ++L L ++ + ++++ H+ G + ++ +RA + + RG+ +
Sbjct: 45 LKKESFKILDTLAVIIKNSNASYMVKSHSTLRGKQEDNLVKTQKRAEIIKEELINRGVDS 104
Query: 121 SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+R+ +G+ + KN R +
Sbjct: 105 TRLIAKGFGETDRIYHTPTRIGDMKNDRIEIV 136
>gi|257486672|ref|ZP_05640713.1| OmpA family protein [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 160
Score = 48.3 bits (113), Expect = 3e-04, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 23/62 (37%)
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D G ++ + RA +V F G+ +R+ G MP A NRR
Sbjct: 1 DTSGPTEANQKISQERAQSVAAIFRLSGLERNRLSQRGMGAVMPRAANDSLQGRALNRRV 60
Query: 150 IV 151
+
Sbjct: 61 EI 62
>gi|209549648|ref|YP_002281565.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209535404|gb|ACI55339.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 742
Score = 48.3 bits (113), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 8/108 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWL-----EKHDCDFLIEGHADELGSRNSSIALGLR 104
D++ F T S I + L + + + FLIEGH D +G+ S++ L +
Sbjct: 623 DTITFATGSADIPMTQARTLRKVADAISQVLKKDPSETFLIEGHTDAVGTDQSNLVLSDQ 682
Query: 105 RAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA +V N GI + YG++ V + +NRR V
Sbjct: 683 RAESVANVLSDVYGIPPENLATQGYGEQYLKVNTSGPE--QENRRVTV 728
>gi|17230523|ref|NP_487071.1| hypothetical protein all3031 [Nostoc sp. PCC 7120]
gi|17132125|dbj|BAB74730.1| all3031 [Nostoc sp. PCC 7120]
Length = 599
Score = 48.3 bits (113), Expect = 3e-04, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 56/135 (41%), Gaps = 12/135 (8%)
Query: 31 PDTVLNESSLQE---QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK--------- 78
D L ES L E S + +FF S I P+++ L+NL ++K
Sbjct: 456 QDQDLVESELNELAIYQSQIEREIIFFPEGSQEIIPSELSKLNNLVLAIKKLLPIAKYLE 515
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
D I GH + G+ + + L R+ V +Y ++GIS S+++V P
Sbjct: 516 KDVHIQIIGHTNTTGTESRNAQLSAGRSQRVLSYLSSQGISTSQLQVLGVSSSQPLQPEL 575
Query: 139 DEDAYAKNRRAIVFL 153
++ NRR +
Sbjct: 576 TDEGKKFNRRVSFKV 590
>gi|329902808|ref|ZP_08273256.1| Outer membrane protein A precursor [Oxalobacteraceae bacterium
IMCC9480]
gi|327548603|gb|EGF33260.1| Outer membrane protein A precursor [Oxalobacteraceae bacterium
IMCC9480]
Length = 392
Score = 48.3 bits (113), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/158 (18%), Positives = 54/158 (34%), Gaps = 15/158 (9%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLN-----ESSLQEQFSSSVGDSVFFDTSSYSIRPAD 65
+A + + P + + V + F ++ A
Sbjct: 233 AACANPPCATPAPGTPVPTEPGGICTGGICPACPDPVPVTVVVPGDITFAFGQATLTAAG 292
Query: 66 IQVLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
L L + ++G+ D++GS ++AL RA + +Y +A G+SA +++
Sbjct: 293 KTQLDMLITAANAGGYGSVSVDGYTDQIGSDKVNLALSTARATTIRDYLLAHGLSALQIR 352
Query: 125 VTSYGKEMPSVY-----GHDED----AYAKNRRAIVFL 153
T +G V G A NRR V L
Sbjct: 353 ATGHGATSLKVELAQCAGSTGAALQTCLAPNRRVDVTL 390
>gi|229495588|ref|ZP_04389321.1| OmpA family protein [Porphyromonas endodontalis ATCC 35406]
gi|229317571|gb|EEN83471.1| OmpA family protein [Porphyromonas endodontalis ATCC 35406]
Length = 415
Score = 48.3 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 57/128 (44%), Gaps = 8/128 (6%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCD 82
T + P ++ + ++ + +V+F +S +I + + L E +
Sbjct: 290 QSTTTAPPSPEVSIAPVESAAAIDFP-TVYFAFNSATISSEEEVKMQQTLRLLQENPKLN 348
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
+I G D +G+ ++ + +RA A+ + +RGISA+R+K G++ E A
Sbjct: 349 IIIIGWCDTVGNAAVNLRMSQKRAEALKTWLTSRGISAARIKAVGRGRDF----NEKEAA 404
Query: 143 YAKNRRAI 150
A RR+
Sbjct: 405 KA--RRSE 410
>gi|146301157|ref|YP_001195748.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
UW101]
gi|146155575|gb|ABQ06429.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
Length = 420
Score = 48.3 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 57/131 (43%), Gaps = 2/131 (1%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-F 83
D + ++ E+ + +V+FD +S A + + L +L+ +
Sbjct: 291 DKTYEKKGSGTATNNTVEELINGGYVNVYFDFNSSKPTNASLSGVDFLVKYLKNNPGKSA 350
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
I G+ADE+G + + L +RA AV V GI ASR+ V + G++ ++A
Sbjct: 351 DIIGYADEIGKTSYNTELSRKRAEAVKKVAVNAGIDASRLNVIANGEDTSVNKN-SKEAR 409
Query: 144 AKNRRAIVFLK 154
RR +K
Sbjct: 410 QIVRRVTFQVK 420
>gi|115374815|ref|ZP_01462090.1| flagellar motor protein MotB [Stigmatella aurantiaca DW4/3-1]
gi|115368211|gb|EAU67171.1| flagellar motor protein MotB [Stigmatella aurantiaca DW4/3-1]
Length = 261
Score = 48.3 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 43/143 (30%), Gaps = 10/143 (6%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL-GSWLEKH 79
L +++ D L+ + +F + ++ P +VL+
Sbjct: 89 TAKLKEELTRGDAWLDAIGTEALRLELSERLLF-EPGQSNLTPRGTEVLARAGAVLAAVE 147
Query: 80 DCDFLIEGHADELG------SRNSSIALGLRRAYAVFNYFVARGIS--ASRMKVTSYGKE 131
+ H DEL + +S L RA V R+ T +
Sbjct: 148 GHTVEVAAHTDELPVPAEAETEGTSWELSTARAATVVRALHEGPARLAQERLSATGHASF 207
Query: 132 MPSVYGHDEDAYAKNRRAIVFLK 154
P V +NRR + L+
Sbjct: 208 RPVVPSDSPVNRLRNRRVTLMLR 230
>gi|89891400|ref|ZP_01202906.1| hypothetical protein BBFL7_00541 [Flavobacteria bacterium BBFL7]
gi|89516431|gb|EAS19092.1| hypothetical protein BBFL7_00541 [Flavobacteria bacterium BBFL7]
Length = 486
Score = 48.3 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 56/127 (44%), Gaps = 2/127 (1%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIE 86
++ +++ + ++ + +V+F +S + ++ L ++++ + +
Sbjct: 360 GANGANGMSDKGVIKKLINEGYVNVYFQFNSTKPALYSLGAINTLVTYMKDNPNATATLT 419
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
G+ADELGS + L RRA V + VA G+ ASR+ G++ +A
Sbjct: 420 GYADELGSPAYNKNLSDRRAKMVHDVLVASGVDASRLSHNGDGEDASVDKNSS-EARQLV 478
Query: 147 RRAIVFL 153
RR +
Sbjct: 479 RRVTFRV 485
>gi|86748022|ref|YP_484518.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
gi|86571050|gb|ABD05607.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
Length = 212
Score = 48.3 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 42/106 (39%), Gaps = 8/106 (7%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGLRRAYA 108
+ F+ +S +I + LG L D F++ GH D +GS N + L RRA
Sbjct: 100 ITFEYNSANISRKAEPAVEALGKALANPDLRGSTFVVAGHTDSIGSDNYNQDLSERRADT 159
Query: 109 VFNYFVARGISAS-RMKVTSYGKEMPS-VYGHDEDAYAKNRRAIVF 152
+ V + A + YG+ P + A NRR V
Sbjct: 160 IKRVLVEKYGIAGADLVTVGYGESKPKNADNPTD---ASNRRVQVV 202
>gi|254462635|ref|ZP_05076051.1| OmpA/MotB [Rhodobacterales bacterium HTCC2083]
gi|206679224|gb|EDZ43711.1| OmpA/MotB [Rhodobacteraceae bacterium HTCC2083]
Length = 517
Score = 48.3 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 39/105 (37%), Gaps = 7/105 (6%)
Query: 57 SSYSIRPADIQVLSNLGSWLE---KHDCDFLIEGHADELGSRNSSIALGLRRAY----AV 109
S ++ + + L +E + G +D G + + + LRRA AV
Sbjct: 413 GSSALDAQSLSNVQQLARAIETGVYDERSVTFVGFSDGQGPADGNKTIALRRANSVLAAV 472
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+S + V ++G+ +P NRR ++++
Sbjct: 473 KKAAETVDLSELNISVEAFGEALPMACDDSAWGRQVNRRVEIWVR 517
>gi|330954871|gb|EGH55131.1| OmpA/MotB [Pseudomonas syringae Cit 7]
Length = 831
Score = 48.3 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 47/121 (38%), Gaps = 12/121 (9%)
Query: 46 SSVGDSVFFDTSSYSIRP---ADIQVLSNLGSW--LEKHDCDFLIEGHADELGSRNSSIA 100
++ F + A + LS + + +I GHAD++G S++
Sbjct: 708 ITLESDTLFAFGRADFQSLELAGQRQLSAIAGKLLNTPNVGKIVITGHADQIGDAQSNLQ 767
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK-------NRRAIVFL 153
+ +RA + Y V +G+ + + G P V+ + A+ NRR + +
Sbjct: 768 VSRQRAQTIKTYLVGKGLPSELVDAVGEGSNKPLVHCDMQMPRAELIHCLEPNRRVEIEV 827
Query: 154 K 154
+
Sbjct: 828 R 828
>gi|302189602|ref|ZP_07266275.1| OmpA/MotB [Pseudomonas syringae pv. syringae 642]
Length = 831
Score = 48.3 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 47/121 (38%), Gaps = 12/121 (9%)
Query: 46 SSVGDSVFFDTSSYSIRP---ADIQVLSNLGSW--LEKHDCDFLIEGHADELGSRNSSIA 100
++ F + A + LS + + +I GHAD++G S++
Sbjct: 708 ITLESDTLFAFGRADFQSLELAGQRQLSAIAGKLLNTPNVGKIVITGHADQIGDAQSNLQ 767
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK-------NRRAIVFL 153
+ +RA + Y V +G+ + + G P V+ + A+ NRR + +
Sbjct: 768 VSRQRAQTIKTYLVGKGLPSELVDAVGEGSNKPLVHCDMQMPRAELIHCLEPNRRVEIEV 827
Query: 154 K 154
+
Sbjct: 828 R 828
>gi|294140610|ref|YP_003556588.1| OmpA family protein [Shewanella violacea DSS12]
gi|293327079|dbj|BAJ01810.1| OmpA family protein [Shewanella violacea DSS12]
Length = 252
Score = 48.3 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 46/112 (41%), Gaps = 1/112 (0%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSI 99
Q+ +G ++ F T S + L L S L +D + G+AD G +
Sbjct: 128 QKLTELELGLNIQFKTGSSQLETHFQPQLDELASVLRISNDLRLDLMGYADRRGESTYNQ 187
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
AL +R V +Y + +G+ ++ ++YG P + +RR +
Sbjct: 188 ALSEQRVAEVKSYLLTKGVDEKKLAASAYGASAPLTAEQSFENDFFDRRVTI 239
>gi|289672144|ref|ZP_06493034.1| OmpA/MotB [Pseudomonas syringae pv. syringae FF5]
Length = 831
Score = 48.3 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 47/121 (38%), Gaps = 12/121 (9%)
Query: 46 SSVGDSVFFDTSSYSIRP---ADIQVLSNLGSW--LEKHDCDFLIEGHADELGSRNSSIA 100
++ F + A + LS + + +I GHAD++G S++
Sbjct: 708 ITLESDTLFAFGRADFQSLELAGQRQLSAIAGKLLNTPNVGKIVITGHADQIGDAQSNLQ 767
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK-------NRRAIVFL 153
+ +RA + Y V +G+ + + G P V+ + A+ NRR + +
Sbjct: 768 VSRQRAQTIKTYLVGKGLPSELVDAVGEGSNKPLVHCDMQMPRAELIHCLEPNRRVEIEV 827
Query: 154 K 154
+
Sbjct: 828 R 828
>gi|75907103|ref|YP_321399.1| OmpA/MotB protein [Anabaena variabilis ATCC 29413]
gi|75700828|gb|ABA20504.1| OmpA/MotB [Anabaena variabilis ATCC 29413]
Length = 597
Score = 48.3 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 12/135 (8%)
Query: 31 PDTVLNESSLQE---QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK--------- 78
D L ES L+E S VFF S I P+++ L+NL ++K
Sbjct: 454 QDQDLVESELKELALYQSQIERAIVFFPEGSQEIIPSELSKLNNLALAVKKLLAVAKYLE 513
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
D I GH + G+ + + L R+ V +Y ++GIS S+++V P
Sbjct: 514 KDVYIQIIGHTNTTGTESRNAQLSEGRSQRVLSYLSSQGISTSQLQVLGVSSSQPLQPEL 573
Query: 139 DEDAYAKNRRAIVFL 153
++ NRR +
Sbjct: 574 TDEGKKFNRRVSFKV 588
>gi|332967831|gb|EGK06930.1| OmpA family protein [Kingella kingae ATCC 23330]
Length = 227
Score = 48.3 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/158 (20%), Positives = 63/158 (39%), Gaps = 21/158 (13%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
+ + + +P ++++ + S G + F +RP ++ L+ L + +
Sbjct: 58 LVECGDREAAAPAPAPAPRMETVEQNETVSFGSNFLFGFDKDKLRPEAVETLNQLVARVN 117
Query: 78 KHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP--- 133
+ +EGH D +G+ + AL RRA AV NY V++G+ A R+ G+
Sbjct: 118 GTNVQAVRVEGHTDFMGAEQYNQALSERRATAVANYLVSQGVPAERVSAVGLGESQARMT 177
Query: 134 ------SVYGHDEDAYAK-----------NRRAIVFLK 154
+ + AK +RR V ++
Sbjct: 178 ESCQAEVAKLGNRVSRAKKRAALIACIEPDRRVDVQIR 215
>gi|330989073|gb|EGH87176.1| OmpA/MotB [Pseudomonas syringae pv. lachrymans str. M301315]
Length = 831
Score = 48.3 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 47/121 (38%), Gaps = 12/121 (9%)
Query: 46 SSVGDSVFFDTSSYSIRP---ADIQVLSNLGSW--LEKHDCDFLIEGHADELGSRNSSIA 100
++ F + A + LS + + +I GHAD++G S++
Sbjct: 708 ITLESDTLFAFGRADFQSLELAGQRQLSAIAGKLLNTPNVGKIVITGHADQIGDAQSNLQ 767
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK-------NRRAIVFL 153
+ +RA + Y V +G+ + + G P V+ + A+ NRR + +
Sbjct: 768 VSKQRAQTIKTYLVGKGLPSELVDAVGEGSNKPLVHCDMQMPRAELIHCLEPNRRVEIEV 827
Query: 154 K 154
+
Sbjct: 828 R 828
>gi|289647908|ref|ZP_06479251.1| OmpA/MotB [Pseudomonas syringae pv. aesculi str. 2250]
Length = 656
Score = 48.3 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 47/121 (38%), Gaps = 12/121 (9%)
Query: 46 SSVGDSVFFDTSSYSIRP---ADIQVLSNLGSW--LEKHDCDFLIEGHADELGSRNSSIA 100
++ F + A + LS + + +I GHAD++G S++
Sbjct: 533 ITLESDTLFAFGRADFQSLELAGQRQLSAIAGKLLNTPNVGKIVITGHADQIGDAQSNLQ 592
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK-------NRRAIVFL 153
+ +RA + Y V +G+ + + G P V+ + A+ NRR + +
Sbjct: 593 VSKQRAQTIKTYLVGKGLPSELVDAVGEGSNKPLVHCDMQMPRAELIHCLEPNRRVEIEV 652
Query: 154 K 154
+
Sbjct: 653 R 653
>gi|289625247|ref|ZP_06458201.1| OmpA/MotB [Pseudomonas syringae pv. aesculi str. NCPPB3681]
gi|330870468|gb|EGH05177.1| OmpA/MotB [Pseudomonas syringae pv. aesculi str. 0893_23]
Length = 647
Score = 48.3 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 47/121 (38%), Gaps = 12/121 (9%)
Query: 46 SSVGDSVFFDTSSYSIRP---ADIQVLSNLGSW--LEKHDCDFLIEGHADELGSRNSSIA 100
++ F + A + LS + + +I GHAD++G S++
Sbjct: 524 ITLESDTLFAFGRADFQSLELAGQRQLSAIAGKLLNTPNVGKIVITGHADQIGDAQSNLQ 583
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK-------NRRAIVFL 153
+ +RA + Y V +G+ + + G P V+ + A+ NRR + +
Sbjct: 584 VSKQRAQTIKTYLVGKGLPSELVDAVGEGSNKPLVHCDMQMPRAELIHCLEPNRRVEIEV 643
Query: 154 K 154
+
Sbjct: 644 R 644
>gi|42524415|ref|NP_969795.1| flagellar motor protein MotB [Bdellovibrio bacteriovorus HD100]
gi|39576624|emb|CAE80788.1| flagellar motor protein MotB [Bdellovibrio bacteriovorus HD100]
Length = 319
Score = 48.3 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/155 (18%), Positives = 52/155 (33%), Gaps = 12/155 (7%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS 70
+ +++ I N+ + V V FD+ + ++ L
Sbjct: 73 VSAALLAEQKIMNILKGSGDLNGVEIIKDGNNTLLLKFDGEVLFDSGAVEVKETAKPNLR 132
Query: 71 NLGSWLEKHD--CDFLIEGHADELGSR----NSSIALGLRRAYAVFNYFVARGISASRMK 124
+ S L + +EGH D + S+ L RA +V YF G+ + +
Sbjct: 133 RVVSALRSIEGVNKIAVEGHTDSDAIQSGLVKSNWELSSLRASSVVRYFEESGVDSKLLS 192
Query: 125 VTSYGKEMPSVYGHDEDAYA------KNRRAIVFL 153
+G P D+ + NRR +V +
Sbjct: 193 AAGFGSSHPLAPEVDKAGVSIPANKVLNRRVVVAV 227
>gi|77359582|ref|YP_339157.1| outer membrane protein [Pseudoalteromonas haloplanktis TAC125]
gi|76874493|emb|CAI85714.1| conserved protein of unknown function ; putative outer membrane
protein [Pseudoalteromonas haloplanktis TAC125]
Length = 244
Score = 48.3 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 52/121 (42%), Gaps = 1/121 (0%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADE 91
NE Q Q ++ + +V F T S I P L L + + + G AD+
Sbjct: 110 ANQNEQLTQSQINNLLAMTVQFKTGSRVIAPHFALQLDQLVTLLKNQPQLALDLSGFADQ 169
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
G +++ L R AV +Y + +G+S +R+ ++G++ + + +RR +
Sbjct: 170 RGDEQANLLLSKARVNAVQSYLIKQGVSHTRLSTQAFGEQQTLAKTNTVEDNTFDRRVTL 229
Query: 152 F 152
Sbjct: 230 T 230
>gi|254495834|ref|ZP_05108746.1| IcmN (DotK) [Legionella drancourtii LLAP12]
gi|254354991|gb|EET13614.1| IcmN (DotK) [Legionella drancourtii LLAP12]
Length = 189
Score = 48.3 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/121 (14%), Positives = 51/121 (42%), Gaps = 1/121 (0%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELG 93
+ ++ + + S+ + F+ + I+ ++L+ + ++++ I+ ++ +
Sbjct: 65 VTVVTIGQDYMISIPAAYLFEPQTPHIKWKAYKLLNEVAIFIKQFRKISIYIDSYSSKYV 124
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S AL L R+ V Y ++G+ + + G + P + Y+ N R +
Sbjct: 125 SPQREHALTLARSRIVSEYLWSQGVDSRFIFTQGLGSDKPIIAYTPGGDYSANARVEIKF 184
Query: 154 K 154
+
Sbjct: 185 R 185
>gi|251733455|emb|CAR82477.1| pal [Rhizobium huautlense]
Length = 87
Score = 47.9 bits (112), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/85 (43%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 56 TSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
T S SIR Q L W + +EGHADE G+R ++ALG RRA A Y
Sbjct: 1 TDSTSIRADAQQTLDRQAQWLQRYPNYAITVEGHADERGTREYNLALGARRAAATKEYLA 60
Query: 115 ARGISASRMKVTSYGKEMPSVYGHD 139
+RG+ A+RMK SYGKE P D
Sbjct: 61 SRGVPANRMKTISYGKERPVAVCDD 85
>gi|253990525|ref|YP_003041881.1| hypothetical protein PAU_03051 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|211638903|emb|CAR67518.1| similar to putative exported protein [Photorhabdus asymbiotica
subsp. asymbiotica ATCC 43949]
gi|253781975|emb|CAQ85139.1| similar to putative exported protein [Photorhabdus asymbiotica]
Length = 67
Score = 47.9 bits (112), Expect = 4e-04, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 9/33 (27%)
Query: 121 SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V G P A NRR + L
Sbjct: 1 MWRAVIGEGATRPVATNSTAAGRAANRRVEIRL 33
>gi|45656096|ref|YP_000182.1| peptidoglycan associated cytoplasmic membrane protein [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
gi|30984127|dbj|BAC76763.1| OmpA family outer membrane lipoprotein [Leptospira interrogans
serovar manilae]
gi|45599329|gb|AAS68819.1| peptidoglycan associated cytoplasmic membrane protein [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
Length = 195
Score = 47.9 bits (112), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/185 (16%), Positives = 55/185 (29%), Gaps = 37/185 (20%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSV--GDSVFFDTSSY 59
+ + ++ + ++ + ++P+ E S + V +++ +
Sbjct: 4 KILNLILLGAIAFSFTLCSSAEKKEESAAPEPSTQEQSAAANRNVDVNSPEAIADSLNEK 63
Query: 60 SIRPADIQVLSNLGSWLEKHDCD---------------------------FLIEGHADEL 92
L+ G +K D I GH D +
Sbjct: 64 LKDFRYPDGLTRPGFSYKKADVTPGDFSEWSKTNAPVIKEGLGKLPDSYALEITGHTDAI 123
Query: 93 GSRNSSIA------LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
G + A RA AV + +GI A+R+ G P G D AKN
Sbjct: 124 GPEQAEGAKKGNIFYSELRANAVKQALIKQGIPANRIVTKGAGSSEPV-SGLDAKD-AKN 181
Query: 147 RRAIV 151
RR
Sbjct: 182 RRVTF 186
>gi|332882569|ref|ZP_08450181.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332679369|gb|EGJ52354.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 399
Score = 47.9 bits (112), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 2/134 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD- 80
++ + + S +FD +S + + + + + +L+++
Sbjct: 267 QAKGGSAANNNNSDFSGDVVSDLIKKGYISAYFDFNSSTPQVSSTWAIDIVVKYLKENSG 326
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ LI G+ADELG N + +L +RA AV + V G+SASR+ G++
Sbjct: 327 ANILISGYADELGGTNYNSSLSQKRANAVKDILVKAGVSASRISTEGKGEDTSVDK-SSS 385
Query: 141 DAYAKNRRAIVFLK 154
A RRA LK
Sbjct: 386 RARQIARRATFSLK 399
>gi|85716801|ref|ZP_01047768.1| OmpA/MotB [Nitrobacter sp. Nb-311A]
gi|85696408|gb|EAQ34299.1| OmpA/MotB [Nitrobacter sp. Nb-311A]
Length = 214
Score = 47.9 bits (112), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 41/112 (36%), Gaps = 18/112 (16%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGS---WLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
+ FD S ++ P L +LG E ++ GH D GS + L RRA
Sbjct: 100 DINFDFDSAAVTPRTEPQLHSLGKALTSDELAGSVIMLGGHTDGKGSDAYNHNLSERRAE 159
Query: 108 AVFNYFVARGISAS-RMKVTSYGKE------MPSVYGHDEDAYAKNRRAIVF 152
AV + + R + + YGKE P +NRR V
Sbjct: 160 AVKRFLMERYKIPAANLVAVGYGKEGYKNSADPFAP--------ENRRVEVV 203
>gi|218533090|ref|YP_002423906.1| OmpA/MotB domain protein [Methylobacterium chloromethanicum CM4]
gi|218525393|gb|ACK85978.1| OmpA/MotB domain protein [Methylobacterium chloromethanicum CM4]
Length = 723
Score = 47.9 bits (112), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 8/128 (6%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-----FL 84
+ D V L+ + S +++ FDT S+++ P + LS + + + D FL
Sbjct: 578 TLDQVRYSPQLRARMPSVDINTITFDTGSFTVTPDQAKRLSTIAEAINRTIKDNPQEVFL 637
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAY 143
IEG+ D +GS +++L RRA +V + + YG++ V + +DA
Sbjct: 638 IEGYTDAVGSDIDNLSLSDRRAQSVASVLTQNFQVPPENLTTQGYGEQYLKV--NTQDAN 695
Query: 144 AKNRRAIV 151
+NRR V
Sbjct: 696 RENRRVTV 703
>gi|261380050|ref|ZP_05984623.1| OmpA family protein [Neisseria subflava NJ9703]
gi|284797260|gb|EFC52607.1| OmpA family protein [Neisseria subflava NJ9703]
Length = 253
Score = 47.9 bits (112), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/156 (20%), Positives = 56/156 (35%), Gaps = 21/156 (13%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+ ++ + ++ + S+ F ++RP + L+ L L
Sbjct: 57 ATEGRVECGDREAVAPVQQAPEYVDETVSLSSKTLFGFDKDNLRPEAQENLNALAQRLSN 116
Query: 79 HDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+EGH D +GS + AL RRA V NY V RG+++S++ G+ +
Sbjct: 117 ESVQTVRVEGHTDFMGSEQYNQALSERRANVVANYLVGRGVASSKISAVGLGESQAQMTA 176
Query: 138 HDEDAYAK--------------------NRRAIVFL 153
E AK +RR V +
Sbjct: 177 TCEAEVAKLGKKVSKAKKRAALIACIEPDRRVDVKI 212
>gi|330946477|gb|EGH47518.1| OmpA family protein [Pseudomonas syringae pv. pisi str. 1704B]
Length = 63
Score = 47.9 bits (112), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
D + L RA AV + G++ + G EMP +D KNRR
Sbjct: 1 DAKSDPERAALLSRLRAMAVRRELLKSGVTFRDI--VGLGDEMPVATNEIDDGRIKNRRV 58
Query: 150 IVFLK 154
V+++
Sbjct: 59 EVWVQ 63
>gi|296158506|ref|ZP_06841336.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
gi|295891074|gb|EFG70862.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
Length = 372
Score = 47.9 bits (112), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
I+G+ D LGS + + L +RA V Y + G+SA + GKE P V +D
Sbjct: 267 TSIRIDGYTDRLGSDSYNRQLSAKRAETVKRYLQSGGVSAP-ISARGRGKEDPVVQCNDR 325
Query: 141 DAYAK------NRRAIV 151
+ A NRR +
Sbjct: 326 NHEALIACLGPNRRVEL 342
>gi|90022258|ref|YP_528085.1| OmpA family protein [Saccharophagus degradans 2-40]
gi|89951858|gb|ABD81873.1| OmpA/MotB [Saccharophagus degradans 2-40]
Length = 482
Score = 47.9 bits (112), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 38/100 (38%), Gaps = 6/100 (6%)
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDC---DFLIEGHADELGSRNSSIALGLRRAYAVFNYF 113
S + Q + + +++ + + G D + S L RA AV +
Sbjct: 354 GSAELDNKAKQDILRIVRYMQMPENADKRIQLVGFGDSKETAARSTVLSKLRAVAVKSAL 413
Query: 114 VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ GIS+ V G ++P A KN+R V++
Sbjct: 414 YSYGISSE--SVLGLGSDLPVASNA-GSARLKNQRVEVWV 450
>gi|258651985|ref|YP_003201141.1| OmpA/MotB domain-containing protein [Nakamurella multipartita DSM
44233]
gi|258555210|gb|ACV78152.1| OmpA/MotB domain protein [Nakamurella multipartita DSM 44233]
Length = 478
Score = 47.9 bits (112), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 64/135 (47%), Gaps = 2/135 (1%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVF-FDTSSYSIRPADIQVLSNLGSWLEKH 79
D ++ + +++ + +++ + + FD ++ A L ++ + L+ +
Sbjct: 343 TGAKDADVTDTPSAAWGATMDQYYAAKYAEILDDFDIGKADLKDAHKTQLDSVVTKLQGN 402
Query: 80 DC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ G AD G ++AL L+RA +Y V++GI A+R++V SYG + V
Sbjct: 403 AALRAQLGGAADLTGGAKVNMALSLKRAENARDYLVSKGIDAARLEVQSYGADWARVATT 462
Query: 139 DEDAYAKNRRAIVFL 153
+KNRR V++
Sbjct: 463 TGTNESKNRRVQVWV 477
>gi|260467234|ref|ZP_05813410.1| OmpA/MotB domain protein [Mesorhizobium opportunistum WSM2075]
gi|259029009|gb|EEW30309.1| OmpA/MotB domain protein [Mesorhizobium opportunistum WSM2075]
Length = 403
Score = 47.9 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 8/108 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWL-----EKHDCDFLIEGHADELGSRNSSIALGLR 104
D++ F+ S SI ++Q L + + + FLIEGH D +G+ +++AL R
Sbjct: 284 DTLNFEFGSSSISDTEVQKLQGVADAMEKLLKKNPAETFLIEGHTDAVGTPEANLALSDR 343
Query: 105 RAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA AV + YG+E V + +NRR +
Sbjct: 344 RAEAVAEALTNAFGIPAENLTTQGYGEEYLKVDTSAPN--RENRRVAI 389
>gi|326405348|ref|YP_004285430.1| hypothetical protein ACMV_32010 [Acidiphilium multivorum AIU301]
gi|325052210|dbj|BAJ82548.1| hypothetical protein ACMV_32010 [Acidiphilium multivorum AIU301]
Length = 203
Score = 47.9 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 52/134 (38%), Gaps = 4/134 (2%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-- 80
+ T S + S+ ++ F T S + P + L LG L
Sbjct: 66 AKPAAMRMKTTAPAAVSHAAAQTPSINLNIDFATGSAKLTPQAVTELDRLGRALTDKTLA 125
Query: 81 -CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGH 138
F + GH D G+ ++++AL RA AV Y +++ +R++ T G+ V
Sbjct: 126 AYHFRVVGHTDTTGAASTNLALSQARAAAVKTYLMSKFDIPATRLQATGVGEADLLVPTG 185
Query: 139 DEDAYAKNRRAIVF 152
A NRR +
Sbjct: 186 PNVANRANRRVQII 199
>gi|261365210|ref|ZP_05978093.1| OmpA family protein [Neisseria mucosa ATCC 25996]
gi|288566472|gb|EFC88032.1| OmpA family protein [Neisseria mucosa ATCC 25996]
Length = 253
Score = 47.9 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 53/148 (35%), Gaps = 21/148 (14%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGH 88
+ ++ + S+ F ++RP + L L L + +EGH
Sbjct: 68 EAVAAVQQAPEYVDETVSLSSKTLFGFDKDNLRPEAQENLDALAQRLSNENVQTVRVEGH 127
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK--- 145
D +GS + AL RRA V NY V RG+ +S++ G+ + E AK
Sbjct: 128 TDFMGSEEYNQALSERRANVVANYLVGRGVPSSKVSAVGLGESQAQMTATCEAEVAKLGK 187
Query: 146 -----------------NRRAIVFLKGC 156
+RR V ++
Sbjct: 188 KVSKAKKRAALIACIEPDRRVDVKIRST 215
>gi|240141603|ref|YP_002966083.1| hypothetical protein MexAM1_META1p5204 [Methylobacterium extorquens
AM1]
gi|240011580|gb|ACS42806.1| Conserved hypothetical protein; putative OmpA family member
[Methylobacterium extorquens AM1]
Length = 729
Score = 47.9 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 60/128 (46%), Gaps = 8/128 (6%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-----FL 84
+ D V L+ + S +++ FDT S+++ P + LS + + + D FL
Sbjct: 584 TLDQVRYSPQLRARMPSVDINTITFDTGSFTVTPDQAKRLSTIAEAINRTIKDNPQEVFL 643
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAY 143
IEG+ D +GS +++L RRA +V + + YG++ V + +DA
Sbjct: 644 IEGYTDAVGSDIDNLSLSDRRAQSVASVLTQNFQVPPENLTTQGYGEQYLKV--NTQDAN 701
Query: 144 AKNRRAIV 151
+NRR V
Sbjct: 702 RENRRVTV 709
>gi|218677868|ref|ZP_03525765.1| putative outer membrane protein, OmpA family [Rhizobium etli CIAT
894]
Length = 145
Score = 47.9 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 8/108 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWL-----EKHDCDFLIEGHADELGSRNSSIALGLR 104
D+V F T S I + L + + + FLIEGH D +G+ S++ L +
Sbjct: 26 DTVTFATGSAEIPMTQARTLRKVADAISQVLKKDPSETFLIEGHTDAVGTDQSNLVLSDQ 85
Query: 105 RAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA +V N GI + YG+ V + +NRR +
Sbjct: 86 RAESVANVLSDVYGIPPENLATQGYGERYLKVNTSGPE--QENRRVTI 131
>gi|148261844|ref|YP_001235971.1| OmpA/MotB domain-containing protein [Acidiphilium cryptum JF-5]
gi|146403525|gb|ABQ32052.1| OmpA/MotB domain protein [Acidiphilium cryptum JF-5]
Length = 203
Score = 47.9 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 52/134 (38%), Gaps = 4/134 (2%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-- 80
+ T S + S+ ++ F T S + P + L LG L
Sbjct: 66 AKPAAMRMKTTAPAAVSHAAAQTLSINLNIDFATGSAKLTPQAVTELDRLGRALTDKTLA 125
Query: 81 -CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGH 138
F + GH D G+ ++++AL RA AV Y +++ +R++ T G+ V
Sbjct: 126 AYHFRVVGHTDTTGAASTNLALSQARAAAVKTYLMSKFDIPATRLQATGVGEADLLVPTG 185
Query: 139 DEDAYAKNRRAIVF 152
A NRR +
Sbjct: 186 PNVANRANRRVQII 199
>gi|86750474|ref|YP_486970.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
gi|86573502|gb|ABD08059.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
Length = 273
Score = 47.9 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 43/152 (28%), Gaps = 10/152 (6%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
A+ S+ +IS + ++ + + D F S + +
Sbjct: 112 FALASASLRQALQDMPEISELSKNVMFEETKQGLNLEIMDQDGRAMFADGSKAPFERTRR 171
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL----GSRNSSIALGLRRAYAVFNYFVAR-GISASR 122
+L +L L I GH S + L RA AV ++
Sbjct: 172 LLQSLAGPLRATPLRITIAGHTSAGLMPARSDYNGFDLSADRANAVRQILEREGVPTSHF 231
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
VT P A NRR + L
Sbjct: 232 FAVTGRSDTQPLFPEDPAI--AANRRVTITLM 261
>gi|146340837|ref|YP_001205885.1| hypothetical protein BRADO3900 [Bradyrhizobium sp. ORS278]
gi|146193643|emb|CAL77660.1| conserved hypothetical protein; putative outer membrane protein
with periplasmic-binding domain (ABC-type)
[Bradyrhizobium sp. ORS278]
Length = 550
Score = 47.9 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 4/101 (3%)
Query: 54 FDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F T+S + L + E L+ G AD G+ ++ L L+RA +V
Sbjct: 418 FQTNSVELDNLAAPNLFRVMQALRETPQARLLLAGFADRRGNYQANCRLSLQRAESVKQS 477
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ G+S + Y E+P ++ + KNRR ++L
Sbjct: 478 LASLGVS--NVDTRGYCDEVPVRDNGGDE-FEKNRRVEIYL 515
>gi|316934820|ref|YP_004109802.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
DX-1]
gi|315602534|gb|ADU45069.1| OmpA/MotB domain protein [Rhodopseudomonas palustris DX-1]
Length = 273
Score = 47.9 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 40/152 (26%), Gaps = 10/152 (6%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
A+ S+ +I+ + ++ + + D F S
Sbjct: 112 FALASASLRQALQNMPEIAELSKNIMFEETKQGLNLEIMDQDGRSMFADGSRVPFERTRL 171
Query: 68 VLSNLGSWLEKHDCDFLIEGHADE----LGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
+L L L I GH S + L RA +V G+ S +
Sbjct: 172 LLQRLAVPLRATPLRISIVGHTSSGLLPERSDYNGWDLSSDRANSVRQILEREGLPGSHI 231
Query: 124 KVT-SYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
P A NRR + L
Sbjct: 232 FAVTGKSDSQPLFPEDPSI--AANRRVTITLM 261
>gi|312884426|ref|ZP_07744130.1| putative outer membrane protein [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309367738|gb|EFP95286.1| putative outer membrane protein [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 198
Score = 47.9 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/188 (16%), Positives = 65/188 (34%), Gaps = 36/188 (19%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLD-------------TKISSPDTVLNESSLQEQFSSS 47
M Y + +I++ + + S + D D V+N L +Q
Sbjct: 1 MNYR-LSLIIAVFFLAACSSNEQADYTSKSLSQYKDMALADDDKDGVINARDLCQQTEQG 59
Query: 48 VGDS-----------------VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHA 89
+ F+ S + P + + ++ + + D ++G A
Sbjct: 60 TSIDNDGCGKYTREKGSHNLHILFENDSSEVSPIYLSQIRSMADFLDKYPDTSVELQGFA 119
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
+ LGS + ++ L +RA V V G+ R+ + +G A++R+
Sbjct: 120 NHLGSHSHNLELSKQRASNVKKVLVRYGVDFERISIVGFGD----AKTSHSQNSAQDRKV 175
Query: 150 IVFLKGCR 157
I + G +
Sbjct: 176 IATVIGSK 183
>gi|254695204|ref|ZP_05157032.1| outer membrane protein OprF [Brucella abortus bv. 3 str. Tulya]
gi|261215567|ref|ZP_05929848.1| TraQ protein [Brucella abortus bv. 3 str. Tulya]
gi|260917174|gb|EEX84035.1| TraQ protein [Brucella abortus bv. 3 str. Tulya]
Length = 172
Score = 47.9 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/175 (16%), Positives = 53/175 (30%), Gaps = 30/175 (17%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSV-------------- 48
T+ ++ A+++ + S T +N + QE+ V
Sbjct: 1 MRTLVMVACAVSLAACSSPPKPPTVSGRHRIPINSPAAQEELRLQVFPQEPTAQATVWPA 60
Query: 49 -----GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGL 103
+V+F RP Q+ + G D +
Sbjct: 61 RPPKQTVNVYFPQDVTVFRPTSAQINQLHTLLW-PVPKHINVRGLTDNNCPPPGDTQVAR 119
Query: 104 RRAYAVFNYFVARGISASRMK-----VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA A++N+ + +G+ ASR+ V Y P NRR + +
Sbjct: 120 VRALAIYNWLINQGVPASRITISYAPVKDYASNAPLSP-----GRVLNRRVDIEI 169
>gi|51598427|ref|YP_072615.1| outer membrane protein [Borrelia garinii PBi]
gi|51572998|gb|AAU07023.1| outer membrane protein [Borrelia garinii PBi]
Length = 389
Score = 47.9 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 44/111 (39%), Gaps = 3/111 (2%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGL 103
++ + F S+ I + + L + + + LIEGH ++ G L
Sbjct: 277 GINLSFDIEFYPDSFQILQKEYKKLDLIAKLLEKFKKNNILIEGHTEQFGLEEEMYELSE 336
Query: 104 RRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+RA + NY + + + ++ +G + P AKNRR + +
Sbjct: 337 KRARTIGNYLIKMKVKNKDQILFKGWGSQKPKYPKSSPL-KAKNRRVEITI 386
>gi|322380701|ref|ZP_08054840.1| flagellar motor protein MotB [Helicobacter suis HS5]
gi|321146869|gb|EFX41630.1| flagellar motor protein MotB [Helicobacter suis HS5]
Length = 258
Score = 47.9 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 46/148 (31%), Gaps = 10/148 (6%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPAD--IQVLSN 71
+ + + I+ + + + S+ F+ +SY + +
Sbjct: 88 SSKANENSNRSQVSITKIGQGAILEQIAQGVVLKLPSSLLFE-NSYDDTINATMREYIHR 146
Query: 72 LGSWLE--KHDCDFLIEGHAD-----ELGSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+ + + G D AL RAY V ++ GI ++
Sbjct: 147 IAKIIHALPDQIRIDVRGFTDNTPLPSNSRFKDHYALAASRAYKVMKVLLSDGIDPQKLS 206
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
TSYGK P + + N R +F
Sbjct: 207 FTSYGKNDPIAPNNSLEERLHNNRVEIF 234
>gi|320352308|ref|YP_004193647.1| OmpA/MotB domain-containing protein [Desulfobulbus propionicus DSM
2032]
gi|320120810|gb|ADW16356.1| OmpA/MotB domain protein [Desulfobulbus propionicus DSM 2032]
Length = 189
Score = 47.9 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 48/147 (32%), Gaps = 6/147 (4%)
Query: 7 FIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADI 66
+++ +++S + S E + S+ + F S P
Sbjct: 30 LSLVAGPVRLAVSDTFLITGTSGSIRQACAEEATNADAPCSLP-VILFPLGSTEPEPGQT 88
Query: 67 QVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
L + + + ++ GH LG+ +++ L RA V RG + + V
Sbjct: 89 DQLISGLRHCQVNPITPLVVTGHTCSLGTEATNLRLSRLRAEQVATLLRDRGYTVA--TV 146
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ G P + NRR +
Sbjct: 147 SGKGATDPVSTNPTK--RHLNRRVTLV 171
>gi|319945287|ref|ZP_08019549.1| OmpA domain protein [Lautropia mirabilis ATCC 51599]
gi|319741857|gb|EFV94282.1| OmpA domain protein [Lautropia mirabilis ATCC 51599]
Length = 477
Score = 47.9 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 53/133 (39%), Gaps = 2/133 (1%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
D S + + + + +FF + S S+ PA+ + L LG+ L +
Sbjct: 345 DTRQAATDSRNLRTVAAGSCPRSLKQLSAPIFFKSGSSSLSPAETRRLQQLGACLGRTAW 404
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY-GHDE 140
+ G+AD S + L RRA AV G S++R+ V GK P D+
Sbjct: 405 -VRVTGYADPRYSAAYNKTLSERRARAVAGAISEGGFSSARITVVGAGKTSPRTKVRADK 463
Query: 141 DAYAKNRRAIVFL 153
+ RR + +
Sbjct: 464 ATLQRARRVDILV 476
>gi|224531999|ref|ZP_03672631.1| outer membrane protein [Borrelia valaisiana VS116]
gi|224511464|gb|EEF81870.1| outer membrane protein [Borrelia valaisiana VS116]
Length = 389
Score = 47.9 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 44/111 (39%), Gaps = 3/111 (2%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGL 103
++ + F S+ I + + L + + + LIEGH + G L
Sbjct: 277 GINLSFDIEFYPDSFQILQKEYKKLDIIAELLEKFKKNNLLIEGHTEHFGLEEEMHELSE 336
Query: 104 RRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+RA A+ NY + R + ++ +G + P AKNRR + +
Sbjct: 337 KRARAIGNYLIKMRVKNKDQILFKGWGSKKPKYPKSSPL-KAKNRRVEITI 386
>gi|284048599|ref|YP_003398938.1| OmpA/MotB domain protein [Acidaminococcus fermentans DSM 20731]
gi|283952820|gb|ADB47623.1| OmpA/MotB domain protein [Acidaminococcus fermentans DSM 20731]
Length = 235
Score = 47.9 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/154 (16%), Positives = 45/154 (29%), Gaps = 26/154 (16%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS--------- 74
D L +Q + +SV F++ +I+ + L
Sbjct: 62 KDVGKDLQAQGLQVRIDTKQGVLRIPESVLFESGEANIKEQGQAAVGKLSQSLLKTMTRP 121
Query: 75 WLEKHDCDFLIEGHADELGSRNS----SIALGLRRAYAVFNYFVARGISASRM------- 123
+ IEGH D + N + L +RA +N + +
Sbjct: 122 EYREALETVFIEGHTDNVPIHNEFFQSNWELSTQRAINTWNLMRNDVPEFNWLVNPRGEP 181
Query: 124 --KVTSYGKEMPSVYG----HDEDAYAKNRRAIV 151
+ Y + P + E+ A NRR +
Sbjct: 182 IFSCSGYAETRPVRENGLDPNSEEGRAANRRIDI 215
>gi|163746609|ref|ZP_02153967.1| Outer membrane protein, OmpA/MotB family [Oceanibulbus indolifex
HEL-45]
gi|161380494|gb|EDQ04905.1| Outer membrane protein, OmpA/MotB family [Oceanibulbus indolifex
HEL-45]
Length = 639
Score = 47.9 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 8/108 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-----FLIEGHADELGSRNSSIALGLR 104
D+V F T S +I+P + L+N+GS L + L+EGH D +G ++AL R
Sbjct: 526 DAVRFPTGSAAIQPEQARALANIGSTLRDMIANDPRTVILVEGHTDAVGDAGYNLALSDR 585
Query: 105 RAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA V + YG+ V + NRRA+V
Sbjct: 586 RAETVALALTEYFDVPPANLITQGYGESQLRVPTTTAE--PANRRAVV 631
>gi|284035326|ref|YP_003385256.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
gi|283814619|gb|ADB36457.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
Length = 399
Score = 47.9 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 2/110 (1%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIE 86
T L++ + + +++FD SS +RP L L + L E I
Sbjct: 272 PMPAVTNKPFGPLEKGKAIPL-RNIYFDQSSPVLRPESSTELDQLAAVLLESPTTKIEIR 330
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
GH D G +S++ L R AV +Y ++GI+ +R+K G P
Sbjct: 331 GHTDNQGDFDSNVKLSRDRCQAVIDYLASKGIAKNRLKAVGRGPIDPVAP 380
>gi|13472197|ref|NP_103764.1| hypothetical protein mlr2412 [Mesorhizobium loti MAFF303099]
gi|14022942|dbj|BAB49550.1| mlr2412 [Mesorhizobium loti MAFF303099]
Length = 754
Score = 47.9 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 8/108 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWL-----EKHDCDFLIEGHADELGSRNSSIALGLR 104
D++ F+ S SI ++Q L + S + + FLIEGH D +G+ +++AL R
Sbjct: 635 DTLNFEFGSSSISDTEVQKLEGVASAMEKLLKKNPAETFLIEGHTDAVGTPEANLALSDR 694
Query: 105 RAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA AV I + YG++ V + + +NRR +
Sbjct: 695 RAEAVAEALTNAFGIPPENLTTQGYGEQYLKV--NTQAPNRENRRVAI 740
>gi|303229266|ref|ZP_07316061.1| conserved domain protein [Veillonella atypica ACS-134-V-Col7a]
gi|302516039|gb|EFL57986.1| conserved domain protein [Veillonella atypica ACS-134-V-Col7a]
Length = 55
Score = 47.9 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ RR V Y V G+ A+R+ + G P + A+NRR VF+
Sbjct: 1 MSERRVQDVAQYLVNNGVDANRLIGIANGDAKPVATNATANGKAENRRVDVFI 53
>gi|311277854|ref|YP_003940085.1| OmpA/MotB domain-containing protein [Enterobacter cloacae SCF1]
gi|308747049|gb|ADO46801.1| OmpA/MotB domain protein [Enterobacter cloacae SCF1]
Length = 347
Score = 47.9 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 46/120 (38%), Gaps = 11/120 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
++ V F S ++ ++ L + L+ G++D GS + + AL
Sbjct: 227 NLKSDVMFGYDSATLTNEGKAAINQLYHSPDLQSATGNTTLVIGYSDRTGSASYNQALSA 286
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYA-KN-----RRAIVFLKG 155
RRA AV + G+SA ++ G + A KN RR +V + G
Sbjct: 287 RRAQAVAEQLIGLGMSAENIRTEGRGATDSVTGNTCDNMTGSALKNCLSPDRRVVVQISG 346
>gi|85705706|ref|ZP_01036803.1| OmpA domain protein [Roseovarius sp. 217]
gi|85669696|gb|EAQ24560.1| OmpA domain protein [Roseovarius sp. 217]
Length = 523
Score = 47.9 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 39/97 (40%), Gaps = 4/97 (4%)
Query: 62 RPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS 121
++ + L+ + G +D G ++ + LRRA V V +A+
Sbjct: 427 SRSNAEQLARAMELGHYDARRLVFVGFSDGDGPAGTNRDIALRRAETVRRAVVRAAETAN 486
Query: 122 ----RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
++++ ++G+ MP NRR V+++
Sbjct: 487 LERIKLELEAFGEAMPMACDDTAWGRQVNRRVEVWVR 523
>gi|322379332|ref|ZP_08053708.1| flagellar motor protein MotB [Helicobacter suis HS1]
gi|321148245|gb|EFX42769.1| flagellar motor protein MotB [Helicobacter suis HS1]
Length = 258
Score = 47.5 bits (111), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 46/148 (31%), Gaps = 10/148 (6%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPAD--IQVLSN 71
+ + + I+ + + + S+ F+ +SY + +
Sbjct: 88 SSKANENSNRSQVSITKIGQGAILEQIAQGVVLKLPSSLLFE-NSYDDTINATMREYIHR 146
Query: 72 LGSWLE--KHDCDFLIEGHAD-----ELGSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+ + + G D AL RAY V ++ GI ++
Sbjct: 147 IAKIIHALPDQIRIDVRGFTDNTPLPSNSRFRDHYALAASRAYKVMKVLLSDGIDPQKLS 206
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
TSYGK P + + N R +F
Sbjct: 207 FTSYGKNDPIAPNNSLEERLHNNRVEIF 234
>gi|227876751|ref|ZP_03994860.1| flagellar motor protein B [Mobiluncus mulieris ATCC 35243]
gi|306817698|ref|ZP_07451440.1| OmpA/MotB domain protein [Mobiluncus mulieris ATCC 35239]
gi|227842648|gb|EEJ52848.1| flagellar motor protein B [Mobiluncus mulieris ATCC 35243]
gi|304649512|gb|EFM46795.1| OmpA/MotB domain protein [Mobiluncus mulieris ATCC 35239]
Length = 325
Score = 47.5 bits (111), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 49/133 (36%), Gaps = 5/133 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSS-VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI 85
+ L ++ V +F ++P VL+ L L D I
Sbjct: 124 AAAGQTGALQMRITEKGLVLGMVASDTYFKPGDAEVQPTAQAVLAALAPVLAGTPEDVAI 183
Query: 86 EGHADELGSRNSSIALGLR----RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
EG+AD ++ RA V + G+ S+++ SYG + + +D
Sbjct: 184 EGYADPNPQYSAKYPSNYHLAAGRAIEVLIHLRNGGVPGSKLRTISYGADHQTQVEAGQD 243
Query: 142 AYAKNRRAIVFLK 154
A++ NRR + +
Sbjct: 244 AWSLNRRVDIVIM 256
>gi|149923536|ref|ZP_01911937.1| OmpA family protein [Plesiocystis pacifica SIR-1]
gi|149815605|gb|EDM75136.1| OmpA family protein [Plesiocystis pacifica SIR-1]
Length = 286
Score = 47.5 bits (111), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 40/102 (39%), Gaps = 2/102 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+VFF S + P Q L + +E HAD G+ +I L +R V
Sbjct: 185 AVFFGFDSPKLSPDTQQQLQAAAQCIADQGRLVYLESHADPRGTEEYNILLTDKRGQGVK 244
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ V G+ M+V S G G D+ YA +RR
Sbjct: 245 KFLVDLGVPPENMQVISKGSLE--ARGTDDSTYADDRRVEFV 284
>gi|269976278|ref|ZP_06183274.1| flagellar motor protein MotD [Mobiluncus mulieris 28-1]
gi|269935607|gb|EEZ92145.1| flagellar motor protein MotD [Mobiluncus mulieris 28-1]
Length = 325
Score = 47.5 bits (111), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 49/133 (36%), Gaps = 5/133 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSS-VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI 85
+ L ++ V +F ++P VL+ L L D I
Sbjct: 124 AAAGQTGALQMRITEKGLVLGMVASDTYFKPGDAEVQPTAQAVLAALAPVLAGTPEDVAI 183
Query: 86 EGHADELGSRNSSIALGLR----RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
EG+AD ++ RA V + G+ S+++ SYG + + +D
Sbjct: 184 EGYADPNPQYSAKYPSNYHLAAGRAIEVLIHLRNGGVPGSKLRTISYGADHQTQVEAGQD 243
Query: 142 AYAKNRRAIVFLK 154
A++ NRR + +
Sbjct: 244 AWSLNRRVDIVIM 256
>gi|24212922|ref|NP_710403.1| OmpA family lipoprotein [Leptospira interrogans serovar Lai str.
56601]
gi|24193591|gb|AAN47421.1| OmpA family lipoprotein [Leptospira interrogans serovar Lai str.
56601]
Length = 195
Score = 47.5 bits (111), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/185 (16%), Positives = 55/185 (29%), Gaps = 37/185 (20%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSV--GDSVFFDTSSY 59
+ + ++ + ++ + ++P+ E S + V +++ +
Sbjct: 4 KILNLILLGAIAFSFTLCSSAEKKEESAAPEPSTQEQSAAANRNVDVNSPEAIADSLNEK 63
Query: 60 SIRPADIQVLSNLGSWLEKHDCD---------------------------FLIEGHADEL 92
L+ G +K D I GH D +
Sbjct: 64 LKDFRYPDGLTRPGFSYKKADVTPGDFSEWSKTNAPVIKEGLRKLPDSYALEITGHTDAI 123
Query: 93 GSRNSSIA------LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
G + A RA AV + +GI A+R+ G P G D AKN
Sbjct: 124 GPEQAEGAKKGNIFYSELRANAVKQALIKQGIPANRIVTKGAGSSEPV-SGLDAKD-AKN 181
Query: 147 RRAIV 151
RR
Sbjct: 182 RRVTF 186
>gi|260775707|ref|ZP_05884603.1| Flagellar motor rotation protein MotB [Vibrio coralliilyticus ATCC
BAA-450]
gi|260608123|gb|EEX34292.1| Flagellar motor rotation protein MotB [Vibrio coralliilyticus ATCC
BAA-450]
Length = 294
Score = 47.5 bits (111), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/143 (15%), Positives = 51/143 (35%), Gaps = 5/143 (3%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+++ I K + +++ L ++ + + F S ++PA ++ L +
Sbjct: 131 ALAAIIQAAFKREVDEGMVDVEDLGQELVIRIREKGMFPQGSAFLQPAFRPLIRQLADLI 190
Query: 77 EKHDCDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKE 131
+ I GH + SS L RA +V + R+ + + +
Sbjct: 191 KDVPGQIRIAGHTSSMTFDSELYRSSWDLSALRAASVVLEMEKVPGFDSHRVAIQGWSEH 250
Query: 132 MPSVYGHDEDAYAKNRRAIVFLK 154
P ++ +RR + L+
Sbjct: 251 KPLSSEQYPNSVGSSRRVEISLR 273
>gi|163795725|ref|ZP_02189690.1| OmpA/MotB [alpha proteobacterium BAL199]
gi|159179021|gb|EDP63556.1| OmpA/MotB [alpha proteobacterium BAL199]
Length = 313
Score = 47.5 bits (111), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 54/150 (36%), Gaps = 9/150 (6%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVL 69
++A + ++ L + + ++V+FD +IRP L
Sbjct: 152 IAACQTAYLMAMEALKAAMQPTNVTYETVQ-----QEVARNTVYFDWDKDTIRPDQQAAL 206
Query: 70 S-NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA---SRMKV 125
L IEGH D G + + L RRA V +G++ +++
Sbjct: 207 DKFLAEMKAIGPVTLYIEGHTDTSGPNDYNAELSRRRAENVRTDLRQQGMTVGEVKDLQL 266
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+ G+ +V D +NRR ++ G
Sbjct: 267 LAKGENDLAVATGDGVKEQQNRRVVIIATG 296
>gi|62317017|ref|YP_222870.1| lipoprotein [Brucella abortus bv. 1 str. 9-941]
gi|83269011|ref|YP_418302.1| outer membrane protein OprF [Brucella melitensis biovar Abortus
2308]
gi|189022284|ref|YP_001932025.1| outer membrane protein OprF [Brucella abortus S19]
gi|254691499|ref|ZP_05154753.1| outer membrane protein OprF [Brucella abortus bv. 6 str. 870]
gi|254698304|ref|ZP_05160132.1| outer membrane protein OprF [Brucella abortus bv. 2 str. 86/8/59]
gi|254731746|ref|ZP_05190324.1| outer membrane protein OprF [Brucella abortus bv. 4 str. 292]
gi|256256684|ref|ZP_05462220.1| outer membrane protein OprF [Brucella abortus bv. 9 str. C68]
gi|260544253|ref|ZP_05820074.1| outer membrane protein OprF [Brucella abortus NCTC 8038]
gi|260757119|ref|ZP_05869467.1| TraQ protein [Brucella abortus bv. 6 str. 870]
gi|260759511|ref|ZP_05871859.1| TraQ protein [Brucella abortus bv. 4 str. 292]
gi|260762755|ref|ZP_05875087.1| TraQ protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260882929|ref|ZP_05894543.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|297250039|ref|ZP_06933740.1| type IV secretion system outer membrane lipoprotein [Brucella
abortus bv. 5 str. B3196]
gi|123545549|sp|Q2YJ83|YP57_BRUA2 RecName: Full=Type IV secretion system putative outer membrane
lipoprotein BAB2_0057; Flags: Precursor
gi|148841383|sp|P0C536|YN58_BRUAB RecName: Full=Type IV secretion system putative outer membrane
lipoprotein BruAb2_0058; Flags: Precursor
gi|8163895|gb|AAF73905.1|AF226278_12 unknown [Brucella abortus]
gi|62197210|gb|AAX75509.1| lipoprotein, hypothetical [Brucella abortus bv. 1 str. 9-941]
gi|82939285|emb|CAJ12223.1| outer membrane protein OprF [Brucella melitensis biovar Abortus
2308]
gi|189020858|gb|ACD73579.1| outer membrane protein OprF [Brucella abortus S19]
gi|260097524|gb|EEW81398.1| outer membrane protein OprF [Brucella abortus NCTC 8038]
gi|260669829|gb|EEX56769.1| TraQ protein [Brucella abortus bv. 4 str. 292]
gi|260673176|gb|EEX59997.1| TraQ protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260677227|gb|EEX64048.1| TraQ protein [Brucella abortus bv. 6 str. 870]
gi|260872457|gb|EEX79526.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|297173908|gb|EFH33272.1| type IV secretion system outer membrane lipoprotein [Brucella
abortus bv. 5 str. B3196]
Length = 172
Score = 47.5 bits (111), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/175 (16%), Positives = 53/175 (30%), Gaps = 30/175 (17%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSV-------------- 48
T+ ++ A+++ + S T +N + QE+ V
Sbjct: 1 MRTLVMVACAVSLAACSSPPKPPTVSGRHRIPINSPAAQEELRLQVFPQEPTAQATMWPA 60
Query: 49 -----GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGL 103
+V+F RP Q+ + G D +
Sbjct: 61 RPPKQTVNVYFPQDVTVFRPTSAQINQLHTLLW-PVPKHINVRGLTDNNCPPPGDTQVAR 119
Query: 104 RRAYAVFNYFVARGISASRMK-----VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA A++N+ + +G+ ASR+ V Y P NRR + +
Sbjct: 120 VRALAIYNWLINQGVPASRITISYAPVKDYASNAPLSP-----GRVLNRRVDIEI 169
>gi|313191694|emb|CBW30515.1| putative outer membrane protein A [Bordetella petrii]
gi|313191698|emb|CBW30516.1| putative outer membrane protein A [Bordetella petrii]
gi|313191702|emb|CBW30517.1| putative outer membrane protein A [Bordetella petrii]
Length = 164
Score = 47.5 bits (111), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 38/100 (38%), Gaps = 1/100 (1%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHA 89
P FFD +++P Q+L + D + GH
Sbjct: 65 PVAQAPAKPTPMATKVVFNADTFFDFDKSTLKPEGRQLLDQVAQQASGIDLETIIAVGHT 124
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
D +G+ + L RRA +V +Y V++G+ +R+ G
Sbjct: 125 DSIGTEAYNQKLSERRAASVKSYLVSKGVDPNRIYTEGKG 164
>gi|251733453|emb|CAR82476.1| pal [Rhizobium gallicum]
Length = 87
Score = 47.5 bits (111), Expect = 6e-04, Method: Composition-based stats.
Identities = 37/85 (43%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 56 TSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
T S SIR Q L W + +EGHADE G+R ++ALG RRA A +Y
Sbjct: 1 TDSTSIRADAAQTLDRQAQWLARYPNYAITVEGHADERGTREYNLALGARRAAATKDYLS 60
Query: 115 ARGISASRMKVTSYGKEMPSVYGHD 139
+RG+ A RMK SYGKE P D
Sbjct: 61 SRGVPAQRMKTISYGKERPVAVCDD 85
>gi|251733465|emb|CAR82482.1| pal [Agrobacterium rubi]
Length = 87
Score = 47.5 bits (111), Expect = 6e-04, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 56 TSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
T S SIR Q L W + +EGHADE G+R ++ALG RRA A +
Sbjct: 1 TDSTSIRADAQQTLQRQAQWLARYPNYAITVEGHADERGTREYNLALGARRAAATKEFLA 60
Query: 115 ARGISASRMKVTSYGKEMPSVYGHD 139
++G+ A+RMK SYGKE P D
Sbjct: 61 SQGVPANRMKTISYGKERPVAVCDD 85
>gi|325287672|ref|YP_004263462.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
gi|324323126|gb|ADY30591.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
Length = 285
Score = 47.5 bits (111), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/146 (22%), Positives = 63/146 (43%), Gaps = 11/146 (7%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFS-SSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+++S + +L + + D E S+++ S+ D + F + SY++ +VL +
Sbjct: 122 SVNLSLVQSLKGVLGNLDDEDIEISVEKGVVFVSISDKLLFSSGSYNVATRAKEVLGKVA 181
Query: 74 SW-LEKHDCDFLIEGHADELGSRN----SSIALGLRRAYAVFNYFVA-RGISASRMKVTS 127
K D +F++EGH D + R + L ++RA AV G+ RM
Sbjct: 182 QVVNNKPDFEFMVEGHTDAVPYRKGVLLDNWDLSVKRATAVVRILQNEYGVDPKRMTAAG 241
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +P A+NRR + +
Sbjct: 242 RSQYIPVSSTD----KARNRRTRIVV 263
>gi|307699909|ref|ZP_07636960.1| OmpA family protein [Mobiluncus mulieris FB024-16]
gi|307614947|gb|EFN94165.1| OmpA family protein [Mobiluncus mulieris FB024-16]
Length = 325
Score = 47.5 bits (111), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 49/133 (36%), Gaps = 5/133 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSS-VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI 85
+ L ++ V +F ++P VL+ L L D I
Sbjct: 124 AAAGQTGALQMRITEKGLVLGMVASDTYFKPGDAEVQPTAQAVLAALAPVLTGTPEDVAI 183
Query: 86 EGHADELGSRNSSIALGLR----RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
EG+AD ++ RA V + G+ S+++ SYG + + +D
Sbjct: 184 EGYADPNPQYSAKYPSNYHLAAGRAIEVLIHLRNGGVPGSKLRTISYGADHQTQVEAGQD 243
Query: 142 AYAKNRRAIVFLK 154
A++ NRR + +
Sbjct: 244 AWSLNRRVDIVIM 256
>gi|73746013|ref|YP_302605.1| outer membrane protein precursor [Sphingomonas sp. A1]
gi|72534579|dbj|BAE19699.1| Upf30.5 [Sphingomonas sp. A1]
Length = 155
Score = 47.5 bits (111), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/150 (19%), Positives = 51/150 (34%), Gaps = 3/150 (2%)
Query: 4 STIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRP 63
+F+ S ++ G D+ + S++ SV F SS + RP
Sbjct: 3 KALFLTFSLASLAFAPGAMAADSASMLAAGPVGMSAVSYGEPVMTAVSVSFPDSSTTFRP 62
Query: 64 ADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
+ K + G L + AL LRRA + Y +ARG+S ++
Sbjct: 63 DAS---TAELLAEAKGAAIIYVSGRTSTLRPSAADEALALRRALSARQYLIARGVSPLKI 119
Query: 124 KVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V + +N+R + +
Sbjct: 120 MVNFASASDFVADNSTPEGRYQNQRVDIEV 149
>gi|323529167|ref|YP_004231319.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1001]
gi|323386169|gb|ADX58259.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1001]
Length = 366
Score = 47.5 bits (111), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 32/74 (43%), Gaps = 7/74 (9%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE-- 140
IEG+ D LGS + + L RRA V Y G ++ + GK+ P V +D
Sbjct: 269 IRIEGYTDRLGSESYNRQLSTRRAETVKRYLQN-GGVSTPIAARGRGKDNPVVQCNDRNR 327
Query: 141 ----DAYAKNRRAI 150
D A NRR
Sbjct: 328 QALIDCLAPNRRVE 341
>gi|45656521|ref|YP_000607.1| flagellar motor protein MotB [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45599756|gb|AAS69244.1| sodium translocating Bacterial Flagellar Motor protein [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
Length = 275
Score = 47.5 bits (111), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 42/136 (30%), Gaps = 15/136 (11%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNS 97
+ + S+ + +F+ S + + L S ++ + +EGH D
Sbjct: 112 TEDERGLIISLVSADYFNPGSAILTDSIKIALRKASSLIKDLNRFVRVEGHCDANAVNPG 171
Query: 98 SIA-------------LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG--HDEDA 142
G R + + S + S+G P V +A
Sbjct: 172 VAPGKEERAYINNWDLAGARAINSTDYIINVEKLDPSWFQAVSFGAFRPLVVEYAGTPEA 231
Query: 143 YAKNRRAIVFLKGCRA 158
A NRR + + ++
Sbjct: 232 KAYNRRIDIVIMTEKS 247
>gi|222148525|ref|YP_002549482.1| OmpA family protein [Agrobacterium vitis S4]
gi|221735511|gb|ACM36474.1| OmpA family protein [Agrobacterium vitis S4]
Length = 880
Score = 47.5 bits (111), Expect = 6e-04, Method: Composition-based stats.
Identities = 36/126 (28%), Positives = 54/126 (42%), Gaps = 8/126 (6%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-----EKHDCDFLIE 86
D V N + ++++ D+V F T S I L + + + FLIE
Sbjct: 743 DEVRNSARIRDKMRRIDLDTVTFATGSADISMNQAGTLKKVADAIVRVLKDDPGETFLIE 802
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
GH D +GS S++ L RRA +V N GI M YG++ V + + +
Sbjct: 803 GHTDAVGSAESNLVLSDRRAESVANVLTQVYGIPPENMITQGYGEQFLKVMTYGPE--QQ 860
Query: 146 NRRAIV 151
NRR V
Sbjct: 861 NRRVTV 866
>gi|114765236|ref|ZP_01444368.1| OmpA/MotB [Pelagibaca bermudensis HTCC2601]
gi|114542371|gb|EAU45399.1| OmpA/MotB [Roseovarius sp. HTCC2601]
Length = 329
Score = 47.5 bits (111), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 44/123 (35%), Gaps = 10/123 (8%)
Query: 40 LQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR- 95
+ + D F T S I+ +L + + + + I GH D +
Sbjct: 197 TENGLEIQIVDKSGESMFATGSARIQDRTRDLLRIIADAVVELPNELTISGHTDSVPYTR 256
Query: 96 ---NSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIV 151
S+ L RA A +A G+S R+ ++ P G + +NRR V
Sbjct: 257 AATYSNWELSADRANATRRVLMANGVSPERITRISGLADTEPLNPGSPDA--PENRRISV 314
Query: 152 FLK 154
++
Sbjct: 315 TVQ 317
>gi|146298734|ref|YP_001193325.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
UW101]
gi|146153152|gb|ABQ04006.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
Length = 267
Score = 47.5 bits (111), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 46/110 (41%), Gaps = 8/110 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYA 108
++V+FD Y++ + +V++N ++ I G+ D+ G+ + + L R
Sbjct: 23 ETVYFDFDKYNLTESQSKVVNNFIKSIDTAKVESIQIYGYCDDRGTDDYNFRLSHDRVNT 82
Query: 109 VFNYFVARGISASRMKV-TSYGKEMPSVYGHDEDA----YAKNRRAIVFL 153
+ N V+ G S++ + G V + +NRR + +
Sbjct: 83 IQNLLVSSGFKESKIVILEGKG--RVVVRPDTVENLYETRLRNRRVDLIV 130
>gi|24216275|ref|NP_713756.1| flagellar motor protein MotB [Leptospira interrogans serovar Lai
str. 56601]
gi|24197541|gb|AAN50774.1| flagellar motor protein MotB [Leptospira interrogans serovar Lai
str. 56601]
Length = 275
Score = 47.5 bits (111), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 42/136 (30%), Gaps = 15/136 (11%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNS 97
+ + S+ + +F+ S + + L S ++ + +EGH D
Sbjct: 112 TEDERGLIISLVSADYFNPGSAILTDSIKIALRKASSLIKNLNRFVRVEGHCDANAVNPG 171
Query: 98 SIA-------------LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG--HDEDA 142
G R + + S + S+G P V +A
Sbjct: 172 VAPGKEERAYINNWDLAGARAINSTDYIINVEKLDPSWFQAVSFGAFRPLVVEYAGTPEA 231
Query: 143 YAKNRRAIVFLKGCRA 158
A NRR + + ++
Sbjct: 232 KAYNRRIDIVIMTEKS 247
>gi|307262353|ref|ZP_07543999.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|306867901|gb|EFM99731.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
Length = 334
Score = 47.5 bits (111), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 47/120 (39%), Gaps = 3/120 (2%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
IS + + V + E + + V F +++PA L + + +
Sbjct: 209 ISSVSAGLSYRFGQGAVPVAAPAVETKNFAFSSDVLFAFGKSNLKPAAATALDAMQTEIN 268
Query: 78 KHDCD---FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
+ G+ D +G S++ L RRA V NY V++G A+ + YG+ P
Sbjct: 269 NAGLSNAAIQVNGYTDRIGKEASNLKLSQRRAETVANYIVSKGAPAANVTAVGYGEANPV 328
>gi|256828231|ref|YP_003156959.1| OmpA/MotB domain-containing protein [Desulfomicrobium baculatum DSM
4028]
gi|256577407|gb|ACU88543.1| OmpA/MotB domain protein [Desulfomicrobium baculatum DSM 4028]
Length = 585
Score = 47.5 bits (111), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 53/115 (46%), Gaps = 5/115 (4%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC---DFLIEGHADELGSRNSSI 99
+ + F+T + S+ + L+ + + +++ ++ G++D +G+ S++
Sbjct: 473 YGAQKLPFVFNFETGNLSLDEQGGRDLARIVAMMKEPKNSGKTIVLVGYSDSVGAYASNL 532
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
A+ +RA AV F RG+ + V + G+E KNRR ++LK
Sbjct: 533 AVSRKRAEAVAEAFRKRGLQD--VVVLAAGEEGAIERNDIRAGREKNRRVEIWLK 585
>gi|91217502|ref|ZP_01254461.1| OmpA/MotB family protein [Psychroflexus torquis ATCC 700755]
gi|91184387|gb|EAS70771.1| OmpA/MotB family protein [Psychroflexus torquis ATCC 700755]
Length = 235
Score = 47.5 bits (111), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 65/141 (46%), Gaps = 9/141 (6%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVL-SNLGSWLEKHD 80
+D S + + + ++ + F S I +D +L + + +
Sbjct: 98 SKIDKIGESITNIESFKRILQEKKQLTPIGLMFTIDSKMINKSDFVLLDFYIEQYQALNK 157
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK----EMPSVY 136
LIEG+ +LG+++ ++ L RR Y+V Y +A+GI +S++K SYG+ P +
Sbjct: 158 GYLLIEGYTCDLGTKSHNLELSERRNYSVEKYLIAKGIPSSKIKTKSYGEKFFERRPII- 216
Query: 137 GHDEDAYAKNRRAIVFLKGCR 157
E++ +NRR + + +
Sbjct: 217 ---EESRIENRRVNLSIIESK 234
>gi|46202522|ref|ZP_00053085.2| COG2885: Outer membrane protein and related
peptidoglycan-associated (lipo)proteins
[Magnetospirillum magnetotacticum MS-1]
Length = 164
Score = 47.5 bits (111), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/160 (20%), Positives = 55/160 (34%), Gaps = 12/160 (7%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSL-------QEQFSSSVGDSVF 53
M++ + LSA+ +S ++ ++ + V
Sbjct: 1 MKFLHVIAALSALVAVSACAEMEPMAPPTASTPMVAVPPPPPALVVRDDVALPPSPVVVH 60
Query: 54 FDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
F+ + I + +QVL L L+ I+G D G + L +RA AV
Sbjct: 61 FNHAKADITGSTMQVLWGLAPALKAAEPGLIRIQGFTDSSGKAAYNQVLSEKRAQAVAEQ 120
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
GI+A R++VT G G + RR +
Sbjct: 121 LRKLGITA-RIEVTGQGIVKGGKKGQKDQGA---RRVEIT 156
>gi|332519438|ref|ZP_08395905.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
gi|332045286|gb|EGI81479.1| OmpA/MotB domain protein [Lacinutrix algicola 5H-3-7-4]
Length = 289
Score = 47.5 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 45/113 (39%), Gaps = 4/113 (3%)
Query: 45 SSSVGDSVFFDTSSYSIR-PADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGL 103
+ V+FDT Y++ + ++L + S + I G D+ G+ ++ L
Sbjct: 18 QKTFTHDVYFDTDEYNVPLTEENRLLLFISSLDSININKVSIYGFTDDRGTNEYNLELSQ 77
Query: 104 RRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDA--YAKNRRAIVFL 153
RA + F G+ + + V G+ + V +E NR+ + +
Sbjct: 78 NRANTIKELFSGYGVDPNLITNVNGKGEILLKVLNEEEVHQIRGLNRKVEIIV 130
>gi|150024778|ref|YP_001295604.1| OmpA family outer membrane protein [Flavobacterium psychrophilum
JIP02/86]
gi|149771319|emb|CAL42788.1| Probable outer membrane protein, OmpA family [Flavobacterium
psychrophilum JIP02/86]
Length = 283
Score = 47.5 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 42/109 (38%), Gaps = 4/109 (3%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
V +++ F +S + Q++ +L + I G+ + + L RRA
Sbjct: 173 VINNILFQINSEKLANGSSQIIIDLLDYLTNNPKIKIEIHGNIC-CNPNTNDVKLSYRRA 231
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSV--YGHDEDAYAKNRRAIVFL 153
+F+Y + GI+ SR+ YG P NRR + +
Sbjct: 232 KYIFDYLIKNGIATSRLGYHGYGSANPIYKIPEKSYQEELANRRVEILI 280
>gi|253578401|ref|ZP_04855673.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850719|gb|EES78677.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 310
Score = 47.5 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 47/129 (36%), Gaps = 19/129 (14%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGS---------WLEKHDCDFLIEGHADELGSR 95
+ ++ +V FD + Q L+++ +K+ + +I+G+ D G
Sbjct: 154 ALTLNANVLFDYDKSELTDEGKQELADILPIYCKVLLQKDYKKYLAEIIIDGYTDTDGDY 213
Query: 96 NSSIALGLRRAYAVFNYFVARGIS----------ASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ ++ L +R+ AV Y + + + V +G P +
Sbjct: 214 DYNLELSQKRSLAVAQYLTEIRENFLSSDEISELQNYLTVNGHGSANPVLDSDGNVDKDA 273
Query: 146 NRRAIVFLK 154
+RR V +
Sbjct: 274 SRRVEVKFR 282
>gi|17988380|ref|NP_541013.1| outer membrane protein OprF [Brucella melitensis bv. 1 str. 16M]
gi|225685925|ref|YP_002733897.1| TraQ protein [Brucella melitensis ATCC 23457]
gi|256042982|ref|ZP_05445928.1| TraQ protein [Brucella melitensis bv. 1 str. Rev.1]
gi|256112034|ref|ZP_05452979.1| TraQ protein [Brucella melitensis bv. 3 str. Ether]
gi|256261862|ref|ZP_05464394.1| outer membrane protein OprF [Brucella melitensis bv. 2 str. 63/9]
gi|260564216|ref|ZP_05834701.1| outer membrane protein OprF [Brucella melitensis bv. 1 str. 16M]
gi|265989419|ref|ZP_06101976.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265993480|ref|ZP_06106037.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|81850946|sp|Q8YDY8|YU36_BRUME RecName: Full=Type IV secretion system putative outer membrane
lipoprotein BMEII0036; Flags: Precursor
gi|17984159|gb|AAL53277.1| outer membrane protein oprf [Brucella melitensis bv. 1 str. 16M]
gi|225642030|gb|ACO01943.1| TraQ protein [Brucella melitensis ATCC 23457]
gi|260151859|gb|EEW86952.1| outer membrane protein OprF [Brucella melitensis bv. 1 str. 16M]
gi|262764350|gb|EEZ10382.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|263000088|gb|EEZ12778.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263091339|gb|EEZ15875.1| outer membrane protein OprF [Brucella melitensis bv. 2 str. 63/9]
Length = 172
Score = 47.5 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/175 (16%), Positives = 53/175 (30%), Gaps = 30/175 (17%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSV-------------- 48
T+ ++ A+++ + S T +N + QE+ V
Sbjct: 1 MRTLVMVACAVSLAACSSPPKPPTVSGRHRIPINSPAAQEELRLQVFPQEPTAQATMWPA 60
Query: 49 -----GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGL 103
+V+F RP Q+ + G D +
Sbjct: 61 RPPKQTVNVYFPQDVTVFRPTSAQINQLHTLLW-PVPKHINVRGLTDNSCPPPGDTQVAR 119
Query: 104 RRAYAVFNYFVARGISASRMK-----VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA A++N+ + +G+ ASR+ V Y P NRR + +
Sbjct: 120 VRALAIYNWLINQGVPASRITISYAPVKDYASNAPLSP-----GRVLNRRVDIEI 169
>gi|320158393|ref|YP_004190771.1| membrane protein [Vibrio vulnificus MO6-24/O]
gi|319933705|gb|ADV88568.1| membrane protein [Vibrio vulnificus MO6-24/O]
Length = 188
Score = 47.5 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 32/77 (41%)
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+ +EGHAD GS + L RRA V + +R+ ++G+ P
Sbjct: 112 DPNRKISVEGHADSTGSDTYNKQLSARRANTVARFLKKDLGLGNRIVEKAFGETTPICAA 171
Query: 138 HDEDAYAKNRRAIVFLK 154
+ NRR ++ L+
Sbjct: 172 EENQQNGCNRRVVLTLE 188
>gi|126699538|ref|YP_001088435.1| hypothetical protein CD1929 [Clostridium difficile 630]
gi|255306922|ref|ZP_05351093.1| hypothetical protein CdifA_10067 [Clostridium difficile ATCC 43255]
gi|115250975|emb|CAJ68804.1| putative membrane protein [Clostridium difficile]
Length = 210
Score = 47.5 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 59/168 (35%), Gaps = 21/168 (12%)
Query: 6 IFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQF-----SSSVGDSVFFDTSSYS 60
I I+ S+ ++ D +S + +S + + + G+ FD S
Sbjct: 34 ILILFSSESISGSVEQDLAKNVNASVEETFKKSGIPVKVDKSNGQVTFGEKTMFDVDSDV 93
Query: 61 IRPADIQVLSN--------LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
++P ++L + + +IEGH D++GS ++ L RRAY+V +
Sbjct: 94 LKPEAKEMLKMFVPKYIETIYKDYGDYISKIVIEGHTDDVGSYIYNLDLSQRRAYSVAKF 153
Query: 113 --------FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ + + K G + +RR +
Sbjct: 154 IVGDEIGDYKYKDKVTKHIIAIGRSKAELIKNGDNSVNRDASRRVELK 201
>gi|27366554|ref|NP_762081.1| outer membrane protein [Vibrio vulnificus CMCP6]
gi|27358120|gb|AAO07071.1|AE016808_91 Outer membrane protein [Vibrio vulnificus CMCP6]
Length = 188
Score = 47.5 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 32/77 (41%)
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+ +EGHAD GS + L RRA V + +R+ ++G+ P
Sbjct: 112 DPNRKISVEGHADSTGSDTYNKQLSARRANTVARFLKKDLGLGNRIVEKAFGETTPICAA 171
Query: 138 HDEDAYAKNRRAIVFLK 154
+ NRR ++ L+
Sbjct: 172 EENQQNGCNRRVVLTLE 188
>gi|300870376|ref|YP_003785247.1| peptidoglycan-associated lipoprotein [Brachyspira pilosicoli
95/1000]
gi|300688075|gb|ADK30746.1| outer membrane protein, peptidoglycan-associated lipoprotein
[Brachyspira pilosicoli 95/1000]
Length = 194
Score = 47.5 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/182 (13%), Positives = 56/182 (30%), Gaps = 28/182 (15%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPD--------TVLNESSLQEQFSSSVGDS- 51
M+ + + T+++ S T ++ + + D
Sbjct: 1 MKKIILVLSFILTTVVACSSTPKATTPENTSGFNTELNLPDGVRVRETPRGKVLELYDPK 60
Query: 52 -------------VFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNS 97
V F Q + + + + ++EG++ + G
Sbjct: 61 AKSDVGKQTGIYEVKFQFDKAVEIGEYKQAYNLVYTILNNNPEIRIMVEGNSSKEGKAPY 120
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
+ L +RR+ +NY + G +R+ ++G+ +P NRR +
Sbjct: 121 NYNLSVRRSDTSYNYLIKLGTKNNRLLKNAFGEGLPEYPT-----LEANRRTEFIVIMNE 175
Query: 158 AN 159
A+
Sbjct: 176 AD 177
>gi|254418948|ref|ZP_05032672.1| OmpA family protein [Brevundimonas sp. BAL3]
gi|196185125|gb|EDX80101.1| OmpA family protein [Brevundimonas sp. BAL3]
Length = 385
Score = 47.5 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVF 110
V+FD + V++ ++ + LI G+ D GS ++ L RR+ V
Sbjct: 281 VYFDWDRSDLTAEARSVVTQAATYAKSGAATRVLIVGYTDTSGSAAYNLGLSNRRSRTVA 340
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ VA+G++ + + G+ + D NRRA + +
Sbjct: 341 DALVAQGVNGGVIALDGKGETALAKPTADGVREPLNRRATINI 383
>gi|315223455|ref|ZP_07865312.1| OmpA/MotB domain protein [Capnocytophaga ochracea F0287]
gi|314946628|gb|EFS98619.1| OmpA/MotB domain protein [Capnocytophaga ochracea F0287]
Length = 397
Score = 47.1 bits (110), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 47/127 (37%), Gaps = 2/127 (1%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEG 87
+ + + + + +FD +S + + + + +++ + I G
Sbjct: 272 VGENGEVKDDDVAADLIRKGYINAYFDFNSSKPQISSSWAVDFVAKYMKSNPNAHINING 331
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+ADELG + L +RA AV + V GI SR+ G + A R
Sbjct: 332 YADELGGTQYNQTLSQKRADAVKDLLVKAGIDGSRITAEGKGVDASVDKNSS-RARQLAR 390
Query: 148 RAIVFLK 154
+ LK
Sbjct: 391 KTTFELK 397
>gi|50084798|ref|YP_046308.1| putative antigen [Acinetobacter sp. ADP1]
gi|49530774|emb|CAG68486.1| putative antigen [Acinetobacter sp. ADP1]
Length = 281
Score = 47.1 bits (110), Expect = 7e-04, Method: Composition-based stats.
Identities = 34/149 (22%), Positives = 56/149 (37%), Gaps = 13/149 (8%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSS--YSIRPADIQVLSNLGSWLEKH 79
+ V+ + Q + D++F S + P + L L + + H
Sbjct: 132 QPKPIVKTVTQPVIVKQKEQVDIINLSADALFKFNGSGLNDLLPRGHEELERLSNDIRNH 191
Query: 80 DC---DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV- 135
+ GH D +GS + + LGL+RA V NY V GI A + +S GK P
Sbjct: 192 YIAVSRIHLVGHTDRIGSDSYNYNLGLKRAQTVKNYLVKDGIPAKTISFSSAGKSQPISN 251
Query: 136 -----YGHD--EDAYAKNRRAIVFLKGCR 157
++ +RR V + G +
Sbjct: 252 GCFDISNMTSLKECLQVDRRVSVEITGVK 280
>gi|89072298|ref|ZP_01158877.1| chemotaxis LafU protein [Photobacterium sp. SKA34]
gi|89051830|gb|EAR57282.1| chemotaxis LafU protein [Photobacterium sp. SKA34]
Length = 331
Score = 47.1 bits (110), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/153 (15%), Positives = 54/153 (35%), Gaps = 11/153 (7%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSN 71
+ ++ + K S + + ++ D F + ++ P VL
Sbjct: 129 LSILASVVEETAKQVSAQGNIAIDITPQGLRVTLQDDFKQNMFHRGNANLTPFFEDVLLT 188
Query: 72 LGSWLEKHDCDFLIEGHAD-----ELGSRNSSIALGLRRAYAVFNYFVARGISASR-MKV 125
+ ++ +I GH D SR ++ L RA ++ G+ + R ++V
Sbjct: 189 IAPIFKQISNSIIISGHTDATQFKNRFSRQTNWELSSSRANVARQTLISGGMPSDRVLQV 248
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
+ + + ++NRR +F+ A
Sbjct: 249 AGMAERALL--NKQDPSASENRRIELFVLTTSA 279
>gi|302381877|ref|YP_003817700.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
gi|302192505|gb|ADL00077.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
Length = 382
Score = 47.1 bits (110), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 43/101 (42%), Gaps = 1/101 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEK-HDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
V+FD + V++ ++ + L+ G+AD GS ++ L RRA V
Sbjct: 278 VYFDWDRSDLTAEARSVVTQAATYAKSGRPTRVLVVGYADTSGSAAYNVGLSNRRARTVA 337
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ V+ G++ + + G+ + D NRRA +
Sbjct: 338 DALVSNGVNGGVIALDGKGETNLARPTADGVREPLNRRATI 378
>gi|256820385|ref|YP_003141664.1| OmpA/MotB domain-containing protein [Capnocytophaga ochracea DSM
7271]
gi|256581968|gb|ACU93103.1| OmpA/MotB domain protein [Capnocytophaga ochracea DSM 7271]
Length = 397
Score = 47.1 bits (110), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 47/127 (37%), Gaps = 2/127 (1%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEG 87
+ + + + + +FD +S + + + + +++ + I G
Sbjct: 272 VGENGEVKDDDVAADLIRKGYINAYFDFNSSKPQISSSWAVDFVAKYMKSNPNAHINING 331
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+ADELG + L +RA AV + V GI SR+ G + A R
Sbjct: 332 YADELGGTQYNQTLSQKRADAVKDLLVKAGIDGSRITAEGKGVDASVDKNSS-RARQLAR 390
Query: 148 RAIVFLK 154
+ LK
Sbjct: 391 KTTFELK 397
>gi|218887301|ref|YP_002436622.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218758255|gb|ACL09154.1| OmpA/MotB domain protein [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 311
Score = 47.1 bits (110), Expect = 7e-04, Method: Composition-based stats.
Identities = 33/158 (20%), Positives = 47/158 (29%), Gaps = 44/158 (27%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS------ 94
E ++ D + F + +R A +L L LE D I GH+D
Sbjct: 150 PEGVVLALTDDLLFAPGQWQLREASRPLLGMLAEVLEYVTADVAIAGHSDPRTEGVSALE 209
Query: 95 --------------RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP------- 133
L RRA V YFV R + +R V YG + P
Sbjct: 210 QAAGAGGGAGVVTGDAIGYELAGRRALTVLEYFVQRKLDPARFSVAGYGPDRPSLAGQPP 269
Query: 134 ---------------SVYGHDEDAYAKNRRAIVFLKGC 156
+ G + NRR + +K
Sbjct: 270 SPGAPGVPEASGEPDAAAGSSDPDR--NRRVEILVKTT 305
>gi|255602974|ref|XP_002537961.1| Outer membrane protein A precursor, putative [Ricinus communis]
gi|223514409|gb|EEF24422.1| Outer membrane protein A precursor, putative [Ricinus communis]
Length = 295
Score = 47.1 bits (110), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNSSIALGL 103
++ + F S + P + L ++ + L + + +I G+AD LGS + L
Sbjct: 206 VTMSATELFSFDSAKLNPNQPK-LDDIANVLNNNSSIDNVVITGYADRLGSEKYNQKLSE 264
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
RRA +V Y V++G+SA+R+ G+ P
Sbjct: 265 RRANSVKEYLVSKGVSANRLNAVGKGESNPV 295
>gi|325267033|ref|ZP_08133703.1| OmpA family protein [Kingella denitrificans ATCC 33394]
gi|324981533|gb|EGC17175.1| OmpA family protein [Kingella denitrificans ATCC 33394]
Length = 240
Score = 47.1 bits (110), Expect = 7e-04, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 56/134 (41%), Gaps = 8/134 (5%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
++ D + + + + S+ + F ++RP I+ L+ L + L +
Sbjct: 78 VECGDRAPETAPAPVVQQPQYRTETVSLNSNFLFGFDKDTLRPEAIETLNQLAARLGDSN 137
Query: 81 CD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+EGH D +GS + AL RRA V NY V RG+ AS++ G+ +
Sbjct: 138 VQSARVEGHTDFMGSEQYNQALSERRATRVANYLVERGVPASKISAAGLGESQARM---T 194
Query: 140 EDAYAK-N---RRA 149
A+ N RR
Sbjct: 195 ASCQAEVNKLGRRV 208
>gi|148558474|ref|YP_001257134.1| putative lipoprotein [Brucella ovis ATCC 25840]
gi|163844256|ref|YP_001621911.1| hypothetical protein BSUIS_B0062 [Brucella suis ATCC 23445]
gi|254699373|ref|ZP_05161201.1| hypothetical protein Bsuib55_00717 [Brucella suis bv. 5 str. 513]
gi|254706382|ref|ZP_05168210.1| hypothetical protein BpinM_05165 [Brucella pinnipedialis
M163/99/10]
gi|254711327|ref|ZP_05173138.1| hypothetical protein BpinB_13940 [Brucella pinnipedialis B2/94]
gi|254711926|ref|ZP_05173737.1| hypothetical protein BcetM6_00730 [Brucella ceti M644/93/1]
gi|254714996|ref|ZP_05176807.1| hypothetical protein BcetM_00740 [Brucella ceti M13/05/1]
gi|256014854|ref|YP_003104863.1| lipoprotein, putative [Brucella microti CCM 4915]
gi|256030043|ref|ZP_05443657.1| hypothetical protein BpinM2_05215 [Brucella pinnipedialis
M292/94/1]
gi|256059695|ref|ZP_05449890.1| hypothetical protein Bneo5_05015 [Brucella neotomae 5K33]
gi|256158216|ref|ZP_05456125.1| hypothetical protein BcetM4_05150 [Brucella ceti M490/95/1]
gi|256252843|ref|ZP_05458379.1| hypothetical protein BcetB_00720 [Brucella ceti B1/94]
gi|260166906|ref|ZP_05753717.1| lipoprotein, putative [Brucella sp. F5/99]
gi|261216699|ref|ZP_05930980.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261219930|ref|ZP_05934211.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261313828|ref|ZP_05953025.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261318931|ref|ZP_05958128.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261319567|ref|ZP_05958764.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261323667|ref|ZP_05962864.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261749823|ref|ZP_05993532.1| TraQ protein [Brucella suis bv. 5 str. 513]
gi|261756291|ref|ZP_06000000.1| outer membrane protein OprF [Brucella sp. F5/99]
gi|265987066|ref|ZP_06099623.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265996727|ref|ZP_06109284.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|148369759|gb|ABQ62631.1| putative lipoprotein [Brucella ovis ATCC 25840]
gi|163674979|gb|ABY39089.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|255997514|gb|ACU49201.1| lipoprotein, putative [Brucella microti CCM 4915]
gi|260918514|gb|EEX85167.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|260921788|gb|EEX88356.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261292257|gb|EEX95753.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261298154|gb|EEY01651.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261299647|gb|EEY03144.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261302854|gb|EEY06351.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261736275|gb|EEY24271.1| outer membrane protein OprF [Brucella sp. F5/99]
gi|261739576|gb|EEY27502.1| TraQ protein [Brucella suis bv. 5 str. 513]
gi|262551024|gb|EEZ07185.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|264659263|gb|EEZ29524.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
Length = 172
Score = 47.1 bits (110), Expect = 7e-04, Method: Composition-based stats.
Identities = 30/175 (17%), Positives = 53/175 (30%), Gaps = 30/175 (17%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSV-------------- 48
T+ ++ A+++ + S T +N + QE+ V
Sbjct: 1 MRTLVMVACAVSLAACSSPPKPPTVSGRHRIPINSPAAQEELRLQVFPQEPTAQATMWPA 60
Query: 49 -----GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGL 103
SV+F RP Q+ + G D +
Sbjct: 61 RPPKQTVSVYFPQDVTVFRPTSAQINQLHTLLW-PVPKHINVRGLTDNNCPPPGDTQVAR 119
Query: 104 RRAYAVFNYFVARGISASRMK-----VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA A++N+ + +G+ ASR+ V Y P NRR + +
Sbjct: 120 VRALAIYNWLINQGVPASRITISYAPVKDYASNAPLSP-----GRVLNRRVDIEI 169
>gi|251733485|emb|CAR82492.1| pal [Sinorhizobium kostiense]
gi|251733487|emb|CAR82493.1| pal [Sinorhizobium kostiense]
gi|251733489|emb|CAR82494.1| pal [Sinorhizobium kostiense]
Length = 87
Score = 47.1 bits (110), Expect = 7e-04, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 56 TSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
T S SIR L W + + +EGHADE G+R ++ALG RRA A +Y +
Sbjct: 1 TDSSSIRADAQATLDRQAQWLAKYPNYAITVEGHADERGTREYNLALGARRAAATRDYLI 60
Query: 115 ARGISASRMKVTSYGKEMPSVYGHD 139
+RG+ A+RM+ SYGKE P D
Sbjct: 61 SRGVPANRMRTISYGKEKPVAVCDD 85
>gi|224534380|ref|ZP_03674958.1| outer membrane protein [Borrelia spielmanii A14S]
gi|224514482|gb|EEF84798.1| outer membrane protein [Borrelia spielmanii A14S]
Length = 381
Score = 47.1 bits (110), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 46/111 (41%), Gaps = 3/111 (2%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGL 103
++ + F +S+ I + + L + + + LIEGH ++ G L
Sbjct: 269 GINLSLDIEFYPNSFQILQKEYKKLDLIAKLLEKFKKNNILIEGHTEQFGLEEEMYELSE 328
Query: 104 RRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+RA A+ NY + + + ++ +G + P AKNRR + +
Sbjct: 329 KRARAIGNYLIKMKVKNKDQILFKGWGSQKPKYPKSSPL-KAKNRRVEITI 378
>gi|284007193|emb|CBA72482.1| flagellar motor protein MotB [Arsenophonus nasoniae]
Length = 320
Score = 47.1 bits (110), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 41/123 (33%), Gaps = 12/123 (9%)
Query: 40 LQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR- 95
+ E + D F + S I ++L L L + + GH D
Sbjct: 142 MDEGLQIQIIDGENRPMFASGSAVIDKNMQKILHVLAPVLNDYPNKISLAGHTDSTAYAK 201
Query: 96 ----NSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAI 150
S+ L RA + ++ G+ ++ +V +P A A NRR
Sbjct: 202 GGYGYSNWELSADRANSSRRTLISGGLDEHKIMRVVGMASTVPLENN--PAA-AANRRIS 258
Query: 151 VFL 153
+ +
Sbjct: 259 ILV 261
>gi|251733507|emb|CAR82503.1| pal [Sinorhizobium saheli]
gi|251733509|emb|CAR82504.1| pal [Sinorhizobium saheli]
gi|251733511|emb|CAR82505.1| pal [Sinorhizobium saheli]
Length = 87
Score = 47.1 bits (110), Expect = 7e-04, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 56 TSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
T S SIR L W + + IEGHADE G+R ++ALG RRA A Y
Sbjct: 1 TDSSSIRADAQATLDRQAQWLAKYPNYAITIEGHADERGTREYNLALGARRAAATKEYLA 60
Query: 115 ARGISASRMKVTSYGKEMPSVYGHD 139
+RG+ A+RM+ SYGKE P D
Sbjct: 61 SRGVPANRMRTISYGKEKPVAVCDD 85
>gi|144899852|emb|CAM76716.1| Flagellar motor protein [Magnetospirillum gryphiswaldense MSR-1]
Length = 323
Score = 47.1 bits (110), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 44/130 (33%), Gaps = 10/130 (7%)
Query: 32 DTVLNESSLQEQFSSSVGDS---VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGH 88
+ + + E + D F + S ++ +L + + + I GH
Sbjct: 160 EGSMMVDNTPEGLRIQITDQEGLAMFPSGSSAMFGHTRALLDLVSRIVNQMPNKISITGH 219
Query: 89 ADE----LGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAY 143
D S ++ L RA A + G+ R+ ++ P V D A
Sbjct: 220 TDAIPFRDPSGYTNWELSADRALASRRALLGSGVPEERIDRIVGRASSEPLVV-DDPKA- 277
Query: 144 AKNRRAIVFL 153
+NRR + L
Sbjct: 278 PRNRRISIIL 287
>gi|37676263|ref|NP_936659.1| outer membrane protein [Vibrio vulnificus YJ016]
gi|37200804|dbj|BAC96629.1| outer membrane protein [Vibrio vulnificus YJ016]
Length = 198
Score = 47.1 bits (110), Expect = 8e-04, Method: Composition-based stats.
Identities = 19/77 (24%), Positives = 32/77 (41%)
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+ +EGHAD GS + L RRA V + +R+ ++G+ P
Sbjct: 122 DPNRKISVEGHADSTGSDTYNKQLSARRANTVARFLKKDLGLGNRIVEKAFGETTPICAA 181
Query: 138 HDEDAYAKNRRAIVFLK 154
+ NRR ++ L+
Sbjct: 182 EENQQNGCNRRVVLTLE 198
>gi|251733449|emb|CAR82474.1| pal [Rhizobium galegae]
Length = 87
Score = 47.1 bits (110), Expect = 8e-04, Method: Composition-based stats.
Identities = 37/85 (43%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 56 TSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
T S SIR Q L W +EGHADE G+R ++ALG RRA A Y
Sbjct: 1 TDSTSIRADAQQTLDRQAQWLGRYPKYAITVEGHADERGTREYNLALGARRAAAAKEYLA 60
Query: 115 ARGISASRMKVTSYGKEMPSVYGHD 139
+RG+ A+RMK SYGKE P D
Sbjct: 61 SRGVPANRMKTISYGKERPVAVCDD 85
>gi|251733461|emb|CAR82480.1| pal [Agrobacterium tumefaciens]
Length = 87
Score = 47.1 bits (110), Expect = 8e-04, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 56 TSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
T S SIR Q L W + +EGHADE G+R ++ALG RRA A ++
Sbjct: 1 TDSTSIRADAQQTLQRQAQWLARYPNYAITVEGHADERGTREYNLALGARRAAATRDFLA 60
Query: 115 ARGISASRMKVTSYGKEMPSVYGHD 139
++G+ A+RMK SYGKE P D
Sbjct: 61 SQGVPANRMKTISYGKEKPVAVCDD 85
>gi|251733443|emb|CAR82471.1| pal [Mesorhizobium mediterraneum]
Length = 87
Score = 47.1 bits (110), Expect = 8e-04, Method: Composition-based stats.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 56 TSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
T S SIR LS W + +IEGHADE G+R ++ALG RRA A ++ V
Sbjct: 1 TDSSSIRADAQTTLSRQAQWLNQYGQYAIVIEGHADERGTREYNLALGARRAAATRDFLV 60
Query: 115 ARGISASRMKVTSYGKEMPSVYGHD 139
ARG+S R+K SYGKE P D
Sbjct: 61 ARGVSGQRLKTISYGKERPVAVCDD 85
>gi|254785203|ref|YP_003072631.1| hypothetical protein TERTU_1036 [Teredinibacter turnerae T7901]
gi|237686899|gb|ACR14163.1| conserved hypothetical OmpA family protein [Teredinibacter turnerae
T7901]
Length = 238
Score = 47.1 bits (110), Expect = 8e-04, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 61/136 (44%), Gaps = 1/136 (0%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+ ++ + +Q+Q + V+F T ++ D Q + +L +++
Sbjct: 91 AETSLTSSRNEVAMQQRVIAKMQKQVEQPIEFLVYFPTGEDALSHQDSQRIQSLANYMTD 150
Query: 79 HD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+ ++G AD G+ + L RA +V + VARGI + R++ ++G M
Sbjct: 151 NPSLRVRLDGFADPRGTDEYNNVLSEERARSVVDALVARGIDSRRIEYQAHGASMSMATA 210
Query: 138 HDEDAYAKNRRAIVFL 153
D+DAYA R+ + +
Sbjct: 211 GDKDAYALERKVRIEV 226
>gi|302384369|ref|YP_003820192.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
gi|302194997|gb|ADL02569.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
Length = 385
Score = 47.1 bits (110), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 43/101 (42%), Gaps = 1/101 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEK-HDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
V+FD + V++ ++ + L+ G+AD GS ++ L RRA V
Sbjct: 281 VYFDWDRSDLTAEARSVVTQAATYAKSGRPTRVLVVGYADTSGSAAYNVGLSNRRARTVA 340
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ V+ G++ + + G+ + D NRRA +
Sbjct: 341 DALVSNGVNGGVIALDGKGETNLARPTADGVREPLNRRATI 381
>gi|115360985|ref|YP_778122.1| OmpA/MotB domain-containing protein [Burkholderia ambifaria AMMD]
gi|115286313|gb|ABI91788.1| OmpA/MotB domain protein [Burkholderia ambifaria AMMD]
Length = 264
Score = 47.1 bits (110), Expect = 8e-04, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 50/149 (33%), Gaps = 13/149 (8%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIR---PADIQVLSNLGS 74
+ S EQF ++ F S+ PA L +
Sbjct: 116 ACADFVRAPSAAPVAAAEPPVSTLEQF--TLQSDALFAFGKSSLDSMLPAGKAQLDDAIE 173
Query: 75 WLEKHD--CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
+++H ++ GH D +G + L RA V Y ++ G++ S ++ G
Sbjct: 174 RIKRHKEITRIVVVGHTDRIGPSTVNEPLSRARAQTVRGYLISHGLNGSIIEAEGVGSSQ 233
Query: 133 PSVYGHDEDAYA------KNRRAIVFLKG 155
P + + A +RR + + G
Sbjct: 234 PVTHCPAGQSRAVIACLQPDRRVSISVSG 262
>gi|90577360|ref|ZP_01233171.1| chemotaxis LafU protein [Vibrio angustum S14]
gi|90440446|gb|EAS65626.1| chemotaxis LafU protein [Vibrio angustum S14]
Length = 332
Score = 47.1 bits (110), Expect = 8e-04, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 55/152 (36%), Gaps = 9/152 (5%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSN 71
+ ++ + K S ++ + + D F S ++ P VL +
Sbjct: 129 LAILASVVEETAKQVSAQGNISVDVTPQGLRIILQDDFKQNMFHRGSANLTPFFEDVLLS 188
Query: 72 LGSWLEKHDCDFLIEGHADE-----LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT 126
+ ++ +I GH D S S+ L RA +A G+ ++R+
Sbjct: 189 IAPIFKQISNSLIISGHTDATPFKRQFSNRSNWELSSSRANVARQTLIAGGMPSNRVLQV 248
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
+ E + +A ++NRR +F+ A
Sbjct: 249 AAMAERALLNKQSPNA-SENRRIELFILTTPA 279
>gi|260459525|ref|ZP_05807780.1| OmpA/MotB domain protein [Mesorhizobium opportunistum WSM2075]
gi|259035079|gb|EEW36335.1| OmpA/MotB domain protein [Mesorhizobium opportunistum WSM2075]
Length = 121
Score = 47.1 bits (110), Expect = 8e-04, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 43/108 (39%), Gaps = 8/108 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-----LEKHDCDFLIEGHADELGSRNSSIALGLR 104
S+ F S +I + + N+ LIEGH D +GS S+ L +
Sbjct: 8 QSINFAFGSAAISSSQYGKIENIADALKRILRRDRGARVLIEGHTDAVGSFQSNQVLSEQ 67
Query: 105 RAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA ++ V ++ YG+E V +E+ +NRR +
Sbjct: 68 RAASLKRTLVREFGVPGHALETVGYGEEFLLVPTQNENW--QNRRVTL 113
>gi|255101058|ref|ZP_05330035.1| hypothetical protein CdifQCD-6_09624 [Clostridium difficile
QCD-63q42]
Length = 210
Score = 47.1 bits (110), Expect = 8e-04, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 59/168 (35%), Gaps = 21/168 (12%)
Query: 6 IFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQF-----SSSVGDSVFFDTSSYS 60
I I+ S+ ++ D +S + +S + + + G+ FD S
Sbjct: 34 ILILFSSESISGSVEQDLAKNVNASVEETFKKSGIPVKVDKSNGQVTFGEKTMFDIDSDV 93
Query: 61 IRPADIQVLSN--------LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
++P ++L + + +IEGH D++GS ++ L RRAY+V +
Sbjct: 94 LKPEAKEMLKMFVPKYIETIYKDYGDYISKIVIEGHTDDVGSYIYNLDLSQRRAYSVAKF 153
Query: 113 --------FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ + + K G + +RR +
Sbjct: 154 IVGDEIGDYKYKDKVTKHIIAIGRSKAELIKNGDNSVNRDASRRVELK 201
>gi|332293116|ref|YP_004431725.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332171202|gb|AEE20457.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 429
Score = 47.1 bits (110), Expect = 9e-04, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 56/131 (42%), Gaps = 2/131 (1%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCD 82
+ ++ + + ++ +V+F +S ++ ++ L ++ E
Sbjct: 299 AKKGEVNAPSISSGDDVIKKLIEDGYVNVYFQFNSTKPETYSLESINYLIKYMTENSGAS 358
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
+ G+ADE+G+ +S+ L +RA V + VA GISA R+ VT G++ A
Sbjct: 359 AQLVGYADEIGNASSNQRLSEKRAQMVKDIMVAAGISADRLSVTGNGEDASVDK-ASAPA 417
Query: 143 YAKNRRAIVFL 153
RR L
Sbjct: 418 RQLVRRVTFKL 428
>gi|294341389|emb|CAZ89806.1| putative bacterial outer membrane protein OmpA/MotB [Thiomonas sp.
3As]
Length = 172
Score = 47.1 bits (110), Expect = 9e-04, Method: Composition-based stats.
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 4/108 (3%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGL 103
V V+F +S +++ V+ +L+ H ++G+ D GS+ ++ALG
Sbjct: 64 GPDVPKQVYFAFNSAALKAQYKPVVEVNAQFLQSHPAAHLQLQGNCDPRGSQEYNLALGQ 123
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA AV G S ++M+ SYG E YA +RR +
Sbjct: 124 SRANAVMKAMTLLGASPNQMEAISYGSEK--ASPA-RADYAHDRRVDL 168
>gi|255655882|ref|ZP_05401291.1| hypothetical protein CdifQCD-2_09334 [Clostridium difficile
QCD-23m63]
gi|296450696|ref|ZP_06892449.1| conserved hypothetical protein [Clostridium difficile NAP08]
gi|296879187|ref|ZP_06903182.1| conserved hypothetical protein [Clostridium difficile NAP07]
gi|296260540|gb|EFH07382.1| conserved hypothetical protein [Clostridium difficile NAP08]
gi|296429730|gb|EFH15582.1| conserved hypothetical protein [Clostridium difficile NAP07]
Length = 210
Score = 47.1 bits (110), Expect = 9e-04, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 59/168 (35%), Gaps = 21/168 (12%)
Query: 6 IFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQF-----SSSVGDSVFFDTSSYS 60
I I+ S+ ++ D +S + +S + + + G+ FD S
Sbjct: 34 ILILFSSESISGSVEQDLAKNVNTSVEETFKKSGIPVKVDKSNGQVTFGERTMFDIDSDV 93
Query: 61 IRPADIQVLSN--------LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
++P ++L + + +IEGH D++GS ++ L RRAY+V +
Sbjct: 94 LKPEAKEMLKMFVPKYMETIYKDYGDYISKIVIEGHTDDVGSYIYNLDLSQRRAYSVAKF 153
Query: 113 --------FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ + + K G + +RR +
Sbjct: 154 IVGDEIGDYKYKDKVTKHIIAIGRSKAELIKNGDNSVNRDASRRVELK 201
>gi|329954289|ref|ZP_08295383.1| OmpA family protein [Bacteroides clarus YIT 12056]
gi|328527995|gb|EGF54981.1| OmpA family protein [Bacteroides clarus YIT 12056]
Length = 224
Score = 47.1 bits (110), Expect = 9e-04, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 61/137 (44%), Gaps = 11/137 (8%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ + + + V + ++L + + + F +S ++ L +L L++
Sbjct: 80 AAEAAKIEGAQVEVVKDANNL-DAVKVTFDSGILFAFNSSTLSNDAKASLRDLAKILKED 138
Query: 80 DCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYG 137
I GH D++G+ +++ + RAYAV NY G+S S+ +V G
Sbjct: 139 TTTDIAIIGHTDKVGTYEANMKVSKNRAYAVENYLQDCGVSPSQFKQVEGVGY------N 192
Query: 138 HDEDAY--AKNRRAIVF 152
+++ A+NRR ++F
Sbjct: 193 EYDESLSAAQNRRVVIF 209
>gi|46398715|gb|AAS92043.1| IcmN protein [Legionella pneumophila]
Length = 176
Score = 47.1 bits (110), Expect = 9e-04, Method: Composition-based stats.
Identities = 19/143 (13%), Positives = 48/143 (33%), Gaps = 1/143 (0%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL 72
++ + +S+ + + S+ S F S + A +L+ +
Sbjct: 30 CSVDGACXXTXXXXMTDLNKKGIKVASVGQNYLISIPASALFADQSPRLNWASYSLLNEV 89
Query: 73 GSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
++ + + ++ + S AL L R+ V Y ++G+ + + G +
Sbjct: 90 AAFLKQFRKIAITVTSYSSKYVSVKRERALTLARSRVVSEYLWSQGVDSRIIFTQGLGSD 149
Query: 132 MPSVYGHDEDAYAKNRRAIVFLK 154
P + N R + +
Sbjct: 150 KPITSYTLGGDRSPNARVEITFR 172
>gi|146298626|ref|YP_001193217.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
UW101]
gi|146153044|gb|ABQ03898.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
Length = 376
Score = 47.1 bits (110), Expect = 9e-04, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 56/136 (41%), Gaps = 2/136 (1%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
+ K + TV+N+ + ++ + SV+FD + + + + ++ +
Sbjct: 242 SKQVVVEKPVNNTTVVNDKDVVKELINDKYYSVYFDFNKATPIENSTAAIDVVLTYLRKN 301
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
I G+AD++G + L +RA V F GI++SR+ V G +
Sbjct: 302 PSASLDIIGYADQVGKAEYNEKLSNQRAENVKTIFEKAGIASSRLNVIPAGADTSIQK-D 360
Query: 139 DEDAYAKNRRAIVFLK 154
E+A RR +K
Sbjct: 361 SEEARRLARRVTFKVK 376
>gi|88608624|ref|YP_506755.1| putative peptidoglycan-associated lipoprotein [Neorickettsia
sennetsu str. Miyayama]
gi|88600793|gb|ABD46261.1| putative peptidoglycan-associated lipoprotein [Neorickettsia
sennetsu str. Miyayama]
Length = 208
Score = 47.1 bits (110), Expect = 9e-04, Method: Composition-based stats.
Identities = 34/199 (17%), Positives = 62/199 (31%), Gaps = 48/199 (24%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M + SA+ ++S N + + + Q + + F + +
Sbjct: 1 MSRIVSVAVFSALLLLSGCLHINTSRRGGPASSQFADVECQCPAKNGTVAIIHFRSGEST 60
Query: 61 IRPADIQVLSNLGSWL------EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYF- 113
P Q++ + E + LI GH D+L + +S+ LG RA V Y
Sbjct: 61 ALPEARQLIYENIAECIALRISENPNLKVLITGHTDKLETPENSLGLGKERAITVLEYLL 120
Query: 114 -----------------------------------------VARGISASRMKVTSYGKEM 132
++ + + S GK+
Sbjct: 121 GDVFENLNDLAQEFGSFPISSEKVDNSGSTGDLDNVTQAVSFSKDVLRNHFCTASAGKDK 180
Query: 133 PSVYGHDEDAYAKNRRAIV 151
G E+A+A+NRR I+
Sbjct: 181 LVDEGDTEEAHARNRRVII 199
>gi|115524590|ref|YP_781501.1| OmpA/MotB [Rhodopseudomonas palustris BisA53]
gi|115518537|gb|ABJ06521.1| OmpA/MotB [Rhodopseudomonas palustris BisA53]
Length = 280
Score = 47.1 bits (110), Expect = 9e-04, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 45/151 (29%), Gaps = 10/151 (6%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
A+ S+ +I+ + +E + + D F S
Sbjct: 119 FALASASLRQALQDMPEIAEVSKNVMFEETKEGLNLQIVDQDGRPMFPEGSPVPFQRTKL 178
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL----GSRNSSIALGLRRAYAVFNYFVARG-ISASR 122
++ L + L + GH S L +RA AV G A+
Sbjct: 179 LIERLAAPLRATSLRITLVGHTSSAVLPGRSDADGFDLSWQRANAVRQILKREGLPIANV 238
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ VT P D+ A NRR + L
Sbjct: 239 LSVTGKADSEPLFP--DDPMLAANRRVTITL 267
>gi|116329456|ref|YP_799176.1| OmpA-family lipoprotein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116329940|ref|YP_799658.1| OmpA-family lipoprotein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|116122200|gb|ABJ80243.1| OmpA-family lipoprotein [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116123629|gb|ABJ74900.1| OmpA-family lipoprotein [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 195
Score = 46.7 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 31/185 (16%), Positives = 56/185 (30%), Gaps = 37/185 (20%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSV--GDSVFFDTSSY 59
+ + ++ + ++ + ++P+ E S S V +++ +
Sbjct: 4 KILNLILLGAIAFSFTLCSSAEKKEESAAPEPSAQEQSAAANRSVDVNSPEAIADSLNEK 63
Query: 60 SIRPADIQVLSNLGSWLEKHDCD---------------------------FLIEGHADEL 92
++ G +K D + I GH D +
Sbjct: 64 LKDFRYPDGITRPGFSYKKADVNPGDFSGWSKVNVPVIKEGLGKLPDSYALEITGHTDAV 123
Query: 93 GSRNSSIA------LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
G + A RA AV + +GI A+R+ G P G D AKN
Sbjct: 124 GPEQAEGAKKGNIFYSELRANAVKQALIKQGIPANRIIAKGAGSSEPV-SGLDAKD-AKN 181
Query: 147 RRAIV 151
RR
Sbjct: 182 RRVTF 186
>gi|260712903|ref|YP_003226958.1| OmpA/MotB domain protein [Zymomonas mobilis subsp. mobilis NCIB
11163]
gi|258553429|gb|ACV76374.1| OmpA/MotB domain protein [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 273
Score = 46.7 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 28/86 (32%), Gaps = 14/86 (16%)
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV---ARGISASRMK----------- 124
+EGH D GS +++ L RA + FN V ++
Sbjct: 153 MLETVQVEGHTDSNGSHQNNLVLSTTRAISAFNEIVPDSKNNDMPEMLEFQNLLGQPIMA 212
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAI 150
V YG+ P A NRR
Sbjct: 213 VAGYGEMRPVGNNATAVGRAANRRID 238
>gi|305667116|ref|YP_003863403.1| hypothetical protein FB2170_12741 [Maribacter sp. HTCC2170]
gi|88708050|gb|EAR00288.1| hypothetical protein FB2170_12741 [Maribacter sp. HTCC2170]
Length = 366
Score = 46.7 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 43/109 (39%), Gaps = 7/109 (6%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSW--LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
+ ++ S ++ + ++ + I H D G+ S+ L RRA AV
Sbjct: 255 INWNLGSATLTSSAKNIIDTRLMPVLQQNPGVKLEIASHTDVRGNSGSNQDLSERRAKAV 314
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGH-----DEDAYAKNRRAIVFL 153
+Y + +G+++S + YG+ E +A NRR L
Sbjct: 315 ADYLITKGVNSSLLVANGYGENKVKNRCKEGVSCTEREHAVNRRTEFRL 363
>gi|260779337|ref|ZP_05888229.1| Flagellar motor rotation protein MotB [Vibrio coralliilyticus ATCC
BAA-450]
gi|260605501|gb|EEX31796.1| Flagellar motor rotation protein MotB [Vibrio coralliilyticus ATCC
BAA-450]
Length = 330
Score = 46.7 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 55/153 (35%), Gaps = 11/153 (7%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSN 71
+ +++ + + S +N + + + D F + P +L
Sbjct: 129 LAALAKVIKEAVRQISAQGNVNVTVTPQGLRIVLQDDYKQHMFGRGGSELTPFFEDLLLA 188
Query: 72 LGSWLEKHDCDFLIEGHADE-----LGSRNSSIALGLRRAYAVFNYFVARGISASR-MKV 125
L ++ + +I GH D R S+ L RA A + VA G+ R ++V
Sbjct: 189 LAPVFKRVENPLIISGHTDSTRFKGHVERRSNWELSASRANAARHTLVAGGMPDERVLQV 248
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
T DE ++NRR +F+ A
Sbjct: 249 TGMSDRALL--NGDEPESSENRRIELFILTTPA 279
>gi|327402931|ref|YP_004343769.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
16823]
gi|327318439|gb|AEA42931.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
Length = 254
Score = 46.7 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 37/109 (33%), Gaps = 3/109 (2%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALG 102
+ + + F ++ P+ + L L+ F+ G+ + + L
Sbjct: 142 ELGVPIKLEIQFAYGLDAMLPSSYNDIHFLIETLQADKTLFITLAGHVCCGTDSKN--LS 199
Query: 103 LRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
RA + + IS+SR+ +G + P E NRR
Sbjct: 200 GMRAERIKQILIMEGSISSSRINAIGFGNKKPLFEDDTEIHRQANRRVE 248
>gi|293395760|ref|ZP_06640042.1| outer membrane protein A [Serratia odorifera DSM 4582]
gi|291421697|gb|EFE94944.1| outer membrane protein A [Serratia odorifera DSM 4582]
Length = 352
Score = 46.7 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 51/129 (39%), Gaps = 12/129 (9%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSS 98
E ++ V F +S + P + +L + E ++ G++D +GS + +
Sbjct: 221 EPQRFNLKSDVMFGYNSAELSPQGQAAVRDLYNRPEIQSAKNQTTMVIGYSDRIGSADYN 280
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRA 149
L RRA AV + + G+ A+ ++ G A ++ +RR
Sbjct: 281 QQLSSRRAQAVADELIGLGMPAANVQAQGRGASESVTGTQCDGISARSQRIDCLAPDRRV 340
Query: 150 IVFLKGCRA 158
+V + G A
Sbjct: 341 VVEIAGQHA 349
>gi|251733513|emb|CAR82506.1| pal [Sinorhizobium terangae]
gi|251733515|emb|CAR82507.1| pal [Sinorhizobium terangae]
gi|251733517|emb|CAR82508.1| pal [Sinorhizobium terangae]
Length = 87
Score = 46.7 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 56 TSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
T S SIR L W + + +EGHADE G+R ++ALG RRA A +Y
Sbjct: 1 TDSSSIRADAQATLDRQAQWLAKYPNYAITVEGHADERGTREYNLALGARRAAATRDYLA 60
Query: 115 ARGISASRMKVTSYGKEMPSVYGHD 139
+RG+ A+RM+ SYGKE P D
Sbjct: 61 SRGVPANRMRTISYGKEKPVAVCDD 85
>gi|329298438|ref|ZP_08255774.1| predicted outer membrane protein [Plautia stali symbiont]
Length = 247
Score = 46.7 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 54/142 (38%), Gaps = 13/142 (9%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIR------PADIQVLSNLGSWLEKHD 80
+S E + + + + F S + + +++
Sbjct: 107 SRASSVQSCQEGTTEAYDKYAFSSDLLFRFGSANSNDISAQGREALSSFASMLKKENAAQ 166
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD- 139
++ G D +GS +S++ALG RRA AV +A+G++A+ + S G+
Sbjct: 167 RHIIVTGFTDPIGSDSSNMALGQRRAEAVKALLIAQGMNAANITAQSMGESQ-VNTNCSG 225
Query: 140 -----EDAYAKNRRAIVFLKGC 156
+ YA RR I+ ++
Sbjct: 226 SLQEQKACYASERRVIISVENK 247
>gi|90022215|ref|YP_528042.1| OmpA family protein [Saccharophagus degradans 2-40]
gi|89951815|gb|ABD81830.1| OmpA/MotB [Saccharophagus degradans 2-40]
Length = 230
Score = 46.7 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
++I+ + + K S+++++ + + V F T S + D++ ++++ +
Sbjct: 80 LTIAMNEVEEMKAQLEKDQQRASAMEQKAAEKLEFQVLFTTGSDELSQTDLKRVNSVARY 139
Query: 76 LEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
L + +EGHAD G+ + L R +V +GI SR+ ++YG ++ +
Sbjct: 140 LNTNPELKVNLEGHADPRGTDEYNYVLSEERVKSVIKALEEKGIDRSRVTYSAYGSDLST 199
Query: 135 VYGHDEDAYAKNRRAIVFL 153
Y D +AYA +RR + +
Sbjct: 200 AYQGDLEAYALDRRVKIDV 218
>gi|115524024|ref|YP_780935.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
BisA53]
gi|115517971|gb|ABJ05955.1| OmpA/MotB domain protein [Rhodopseudomonas palustris BisA53]
Length = 272
Score = 46.7 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 24/152 (15%), Positives = 45/152 (29%), Gaps = 10/152 (6%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
A+ S+ +++ + ++ + + D F S
Sbjct: 111 FALASASLRQALQDMPELTEISKNVIFEETKDGLNMEITDQDGRSMFAEGSKVPYDRTRL 170
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL----GSRNSSIALGLRRAYAVFNYFVARGISASRM 123
++ L + L I GH S ++ L RA AV G+ S++
Sbjct: 171 LVQRLAAPLRATPLRISIAGHTSAGVVIGRSDYNAFDLSSDRANAVRQILEREGVPTSQI 230
Query: 124 KVT-SYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
P D+ + NRR + L
Sbjct: 231 YAVSGRADSQPLFP--DDATLSANRRVTITLM 260
>gi|89076293|ref|ZP_01162634.1| hypothetical protein SKA34_22947 [Photobacterium sp. SKA34]
gi|89047997|gb|EAR53586.1| hypothetical protein SKA34_22947 [Photobacterium sp. SKA34]
Length = 261
Score = 46.7 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 2/123 (1%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHAD 90
+E L+E+F + F + ++ P + L L++ + G+ D
Sbjct: 115 QPNYSEVELKERFLLYMEVDNQFALNKTTLLPKYQESLRYAAEILKRQSHWHLQLTGYTD 174
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
G + LGL RA AV ++ + G+ +++ V S G+ NR+
Sbjct: 175 SQGHIQGNYMLGLERANAVKDFLIENGVDTNQISVFSVGENQAVADN-TLTKQLNNRKVE 233
Query: 151 VFL 153
+
Sbjct: 234 ARV 236
>gi|119775139|ref|YP_927879.1| OmpA family protein [Shewanella amazonensis SB2B]
gi|119767639|gb|ABM00210.1| conserved hypothetical OmpA family protein [Shewanella amazonensis
SB2B]
Length = 240
Score = 46.7 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 1/122 (0%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADE 91
L + + ++G +V F T S I P L + +E + ++G AD
Sbjct: 108 NTLQTAREAKLTELTLGLNVQFKTGSSDIEPHFQNQLQAVARVMEAQPDLVIDLKGFADR 167
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
G + + AL +R V Y V+ G+++ R++ ++G P ++ +RR +
Sbjct: 168 RGDSDYNQALSEQRLANVKAYLVSAGVASDRLQGKAFGATAPLSADAGFESDFFDRRVTL 227
Query: 152 FL 153
L
Sbjct: 228 EL 229
>gi|254487991|ref|ZP_05101196.1| OmpA domain protein [Roseobacter sp. GAI101]
gi|214044860|gb|EEB85498.1| OmpA domain protein [Roseobacter sp. GAI101]
Length = 520
Score = 46.7 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 42/97 (43%), Gaps = 4/97 (4%)
Query: 62 RPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS 121
+++Q L+ + L G +D G+ ++ + LRRA AV + ++A+
Sbjct: 424 SRSNVQQLARALEIGQYDARRLLFVGFSDGDGAGRANREIALRRAEAVRRAVIKAAVTAN 483
Query: 122 ----RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ V ++G+ MP NRR V+++
Sbjct: 484 LDRVTLDVDAFGEAMPMACDDSAWGRQANRRVEVWVR 520
>gi|251733497|emb|CAR82498.1| pal [Sinorhizobium meliloti]
gi|251733499|emb|CAR82499.1| pal [Sinorhizobium meliloti]
gi|251733501|emb|CAR82500.1| pal [Sinorhizobium meliloti]
Length = 87
Score = 46.7 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 56 TSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
T S SIR L W + + IEGHADE G+R ++ALG RRA A +Y V
Sbjct: 1 TDSTSIRADAQATLDRQAQWLAKYPNYGITIEGHADERGTREYNLALGARRAAATRDYLV 60
Query: 115 ARGISASRMKVTSYGKEMPSVYGHD 139
+RG+ +RM+ SYGKE P D
Sbjct: 61 SRGVPGNRMRTISYGKEKPVAVCDD 85
>gi|329901809|ref|ZP_08272908.1| outer membrane protein, OmpA family [Oxalobacteraceae bacterium
IMCC9480]
gi|327549018|gb|EGF33629.1| outer membrane protein, OmpA family [Oxalobacteraceae bacterium
IMCC9480]
Length = 396
Score = 46.7 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 31/159 (19%), Positives = 54/159 (33%), Gaps = 16/159 (10%)
Query: 11 SAITMMSISGIDNLDTKISS------PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPA 64
SA + + T + P+ ++++ + F ++ A
Sbjct: 236 SACATALCTQPPSDPTPTPTDPGGLCPNGYCEVCPKTVPVTTTLPGDINFAFGRSTLTAA 295
Query: 65 DIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
+Q L L + I G+ D++GS ++AL RA Y +A G++ +
Sbjct: 296 GMQQLDALIISARAGNYSAVAITGYTDQIGSAAENLALSQARARTARQYMIAHGLTDRAI 355
Query: 124 KVTSYGKEMPSV-----YGHD----EDAYAKNRRAIVFL 153
T G V G + A NRR V L
Sbjct: 356 TATGAGATNLKVELAQCSGKTGAALQACLADNRRVEVTL 394
>gi|224371628|ref|YP_002605792.1| putative outer membrane protein [Desulfobacterium autotrophicum
HRM2]
gi|223694345|gb|ACN17628.1| putative outer membrane protein [Desulfobacterium autotrophicum
HRM2]
Length = 350
Score = 46.7 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 45/105 (42%), Gaps = 4/105 (3%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG---SRNSSIALGLRRAYA 108
+ FD +++ A + L L +L+ + + G D ++ ++I L +RA A
Sbjct: 242 ILFDPCKFALTDAHKRFLGRLAGFLKPYSVLVEVTGFTDYRKIRGTKMTNIELSAKRAGA 301
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V RG+ +S K+T G+ E +RRA + +
Sbjct: 302 VVRELRERGMKSSVFKITGMGEYK-KCLEKSERCRVLSRRADITI 345
>gi|23499825|ref|NP_699265.1| putative lipoprotein [Brucella suis 1330]
gi|161620148|ref|YP_001594034.1| TraQ protein [Brucella canis ATCC 23365]
gi|254702492|ref|ZP_05164320.1| TraQ protein [Brucella suis bv. 3 str. 686]
gi|260568602|ref|ZP_05839071.1| outer membrane protein OprF [Brucella suis bv. 4 str. 40]
gi|261753065|ref|ZP_05996774.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|81789251|sp|Q9RPX3|YU58_BRUSU RecName: Full=Type IV secretion system putative outer membrane
lipoprotein BRA0058; Flags: Precursor
gi|5929877|gb|AAD56622.1|AF141604_12 ORF12 [Brucella suis 1330]
gi|23463394|gb|AAN33270.1| lipoprotein, putative [Brucella suis 1330]
gi|161336959|gb|ABX63263.1| TraQ protein [Brucella canis ATCC 23365]
gi|260155267|gb|EEW90348.1| outer membrane protein OprF [Brucella suis bv. 4 str. 40]
gi|261742818|gb|EEY30744.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
Length = 172
Score = 46.7 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 54/175 (30%), Gaps = 30/175 (17%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSV-------------- 48
T+ ++ A+++ + S T +N + QE+ V
Sbjct: 1 MRTLVMVACAVSLAACSSPPKPPTVSGRHRIPINSPAAQEELRLQVFPQEPTAQATMWPA 60
Query: 49 -----GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGL 103
SV+F RP Q+ + G D +
Sbjct: 61 RPPKQTVSVYFPQDVTVFRPTSAQINQLHTLLW-PVPKHINVRGLTDNNCPPPGDTQVAR 119
Query: 104 RRAYAVFNYFVARGISASRMK-----VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA A++N+ + +G+SASR+ V Y P NRR + +
Sbjct: 120 VRALAIYNWLINQGVSASRITISYAPVKDYASNAPLSP-----GRVLNRRVDIEI 169
>gi|288801975|ref|ZP_06407416.1| lipoprotein PG3 [Prevotella melaninogenica D18]
gi|288335410|gb|EFC73844.1| lipoprotein PG3 [Prevotella melaninogenica D18]
Length = 225
Score = 46.7 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 58/134 (43%), Gaps = 5/134 (3%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ ++ + +++ + + + F + ++ + L+ S ++++
Sbjct: 80 EAAQQLPNARVDKVTDANGLDCVKVTFDSGILFPLNGSNLSASAKNDLTKFASLMQRNSN 139
Query: 82 -DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHD 139
D I+G+ D G+ N ++ L RRA AV +Y RG+S+ ++ V +G P
Sbjct: 140 CDVAIQGYTDASGNDNINLPLSQRRADAVSSYLKGRGVSSRQIRSVQGFGSANPI-ENKT 198
Query: 140 EDAYAKNRRAIVFL 153
NRR V+L
Sbjct: 199 IS--QANRRVEVYL 210
>gi|94502195|ref|ZP_01308691.1| OmpA family protein [Oceanobacter sp. RED65]
gi|94425675|gb|EAT10687.1| OmpA family protein [Oceanobacter sp. RED65]
Length = 143
Score = 46.7 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 45/130 (34%), Gaps = 11/130 (8%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPAD-IQVLSNLGSWLEKHDCDFLIEG 87
L ++ E + +V FD S + +++L+ + ++ + G
Sbjct: 18 MQEGQSLLAANDDESPKQTFLSAVQFDFDSSELTGKARMKLLAKMADLQKQGVSSVSVFG 77
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS----VYGHDEDAY 143
D +G+ + L RA V + G+ + +V P V +
Sbjct: 78 FTDNVGAEAYNKNLAKDRASTVARFLANGGVQIN--EVVG----KPLCCYLVDNESDQNR 131
Query: 144 AKNRRAIVFL 153
NRRA + L
Sbjct: 132 HVNRRAEIHL 141
>gi|251733471|emb|CAR82485.1| pal [Sinorhizobium arboris]
gi|251733473|emb|CAR82486.1| pal [Sinorhizobium arboris LMG 14919]
gi|251733475|emb|CAR82487.1| pal [Sinorhizobium arboris]
Length = 87
Score = 46.7 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 56 TSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
T S SIR L W + + IEGHADE G+R ++ALG RRA A +Y V
Sbjct: 1 TDSTSIRADAQATLDRQAQWLAKYPNYAITIEGHADERGTREYNLALGARRAAATRDYLV 60
Query: 115 ARGISASRMKVTSYGKEMPSVYGHD 139
+RG+ +RM+ SYGKE P D
Sbjct: 61 SRGVPGNRMRTISYGKEKPVAVCDD 85
>gi|114562800|ref|YP_750313.1| OmpA/MotB domain-containing protein [Shewanella frigidimarina NCIMB
400]
gi|114334093|gb|ABI71475.1| OmpA/MotB domain protein [Shewanella frigidimarina NCIMB 400]
Length = 255
Score = 46.7 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 33/147 (22%), Positives = 59/147 (40%), Gaps = 3/147 (2%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQ--FSSSVGDSVFFDTSSYSIRPADIQ 67
L A++ S + + + Q+Q ++G +V F T I P Q
Sbjct: 99 LMALSTKQQSLEQVSEKYYQLQSNLAEQKVNQQQTLNELTIGMNVQFKTGLSHIEPLFEQ 158
Query: 68 VLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT 126
L N+ + + + G+AD G + + AL +R V Y V +GI+ R+
Sbjct: 159 QLDNVAYMMSLSPELTIDLTGYADRRGDNDFNQALSEQRLAEVTQYLVTQGIARERLHGQ 218
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+YG +P + + +RR + L
Sbjct: 219 AYGSTLPMHQEQNFENDFFDRRVTLKL 245
>gi|325269448|ref|ZP_08136065.1| immunogenic lipoprotein PG3 [Prevotella multiformis DSM 16608]
gi|324988369|gb|EGC20335.1| immunogenic lipoprotein PG3 [Prevotella multiformis DSM 16608]
Length = 225
Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 56/134 (41%), Gaps = 5/134 (3%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ ++ + +++ + + + F + ++ + L+ ++++
Sbjct: 80 EAAQALPNARVDKVTDANGLQCVKVTFDSGILFPLNGSNLNVSAKNDLTKFAGLMKRNSN 139
Query: 82 -DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHD 139
D I+G+ D G+ N +I L RRA +V +Y +G++ ++ V +G P
Sbjct: 140 CDVAIQGYTDASGNDNINIPLSQRRAESVSSYLKGQGVTGRQIRSVQGFGSANPI-ENKT 198
Query: 140 EDAYAKNRRAIVFL 153
NRR V+L
Sbjct: 199 VS--QANRRVEVYL 210
>gi|294676839|ref|YP_003577454.1| OmpA/MotB domain-containing protein [Rhodobacter capsulatus SB
1003]
gi|294475659|gb|ADE85047.1| OmpA/MotB domain protein [Rhodobacter capsulatus SB 1003]
Length = 334
Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 30/84 (35%), Gaps = 14/84 (16%)
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYF--------------VARGISASRMKVTS 127
+EGH D S+ S++ L + RA + FN + + V
Sbjct: 217 TVQVEGHTDADASQASNLTLSMLRATSAFNAIAPDAAQDDAPPMLAFQNLLGQPVLAVAG 276
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIV 151
YG+ P + A NRR +
Sbjct: 277 YGEMRPIGPNDSPEGKAANRRIDL 300
>gi|209809116|ref|YP_002264654.1| outer membrane protein, OmpA family [Aliivibrio salmonicida
LFI1238]
gi|208010678|emb|CAQ81065.1| outer membrane protein, OmpA family [Aliivibrio salmonicida
LFI1238]
Length = 275
Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 1/129 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFL 84
S ++ ++ L ++ + F +S + P + LS L+KH D L
Sbjct: 136 QPPSDSNSGNSDIELAQKIYDLLNKDNQFAFNSAELNPKYVVNLSEASQLLKKHEDFKLL 195
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
I GHAD +G + + L + RA V Y G++ +R+ V + G P G +
Sbjct: 196 ITGHADAIGEEDGNQELAIERAKQVKRYLSIFGLALNRIHVDAVGSNDPYFEGTEPHVRL 255
Query: 145 KNRRAIVFL 153
NRR + L
Sbjct: 256 TNRRVTIEL 264
>gi|323136170|ref|ZP_08071252.1| OmpA/MotB domain protein [Methylocystis sp. ATCC 49242]
gi|322398244|gb|EFY00764.1| OmpA/MotB domain protein [Methylocystis sp. ATCC 49242]
Length = 288
Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 30/80 (37%), Gaps = 9/80 (11%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVA---------RGISASRMKVTSYGKEMP 133
L+EGH D G NS+I L RA F + + V YG+ P
Sbjct: 181 VLVEGHTDSDGQDNSNITLSTNRANETFFAMTKHEPALVDFRNDRAQPVLSVAGYGRMRP 240
Query: 134 SVYGHDEDAYAKNRRAIVFL 153
++ A NRR + +
Sbjct: 241 VADNATQEGKATNRRIDLRI 260
>gi|114705809|ref|ZP_01438712.1| flagellar motor protein [Fulvimarina pelagi HTCC2506]
gi|114538655|gb|EAU41776.1| flagellar motor protein [Fulvimarina pelagi HTCC2506]
Length = 407
Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 47/136 (34%), Gaps = 7/136 (5%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
D + S + E L + DS F S A +Q++ + + L+ +
Sbjct: 271 DMGEGVPSQVEVSEGEGGLMISLADDF-DSGMFSVGSAKPNGAAVQMMEKIANVLKTRNG 329
Query: 82 DFLIEGHADELGS---RNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYG 137
+I GH D + L RA+ + G+ A R+ + + P
Sbjct: 330 RIIIRGHTDARPFTSENYDNWRLSTARAHMAYYMLTRGGLGAERVESIEGFADRQPKDAE 389
Query: 138 HDEDAYAKNRRAIVFL 153
+ E NRR + L
Sbjct: 390 NPEAD--INRRIEILL 403
>gi|171315861|ref|ZP_02905091.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
gi|171098957|gb|EDT43745.1| OmpA/MotB domain protein [Burkholderia ambifaria MEX-5]
Length = 264
Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 27/149 (18%), Positives = 49/149 (32%), Gaps = 13/149 (8%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIR---PADIQVLSNLGS 74
+ S EQF ++ F S+ PA L +
Sbjct: 116 ACADFVRTPSAAPVAAAEPPVSTLEQF--TLQSDALFAFGKSSLDSMLPAGKAQLDDAIE 173
Query: 75 WLEKHD--CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
+++H ++ GH D +G + L RA V Y ++ G++ S + G
Sbjct: 174 RIKRHKEITRIVVVGHTDRIGPSTVNEPLSRARAQTVRGYLISHGLNGSIIDAEGVGSSQ 233
Query: 133 PSVYGHDEDAYA------KNRRAIVFLKG 155
P + + A +RR + + G
Sbjct: 234 PVTHCPAGQSRAVIACLQPDRRVSISVSG 262
>gi|4704599|gb|AAD28173.1|AF104302_1 fibronectin binding protein [Campylobacter jejuni]
Length = 287
Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 45/121 (37%), Gaps = 1/121 (0%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
+ ++ + + ++ F +I P + + +
Sbjct: 166 AVEEVADTRPAPQAKCPVEPREGALLDENGCEKTISLEGHFGFDKTTINPTFQEKIKEIA 225
Query: 74 SW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
E D ++EGH D +GSR + L RRA +V N G+ SR+K YG++
Sbjct: 226 KVLDENERYDTILEGHTDNIGSRAYNQKLSERRAKSVANELEKYGVEKSRIKTVGYGQDN 285
Query: 133 P 133
P
Sbjct: 286 P 286
>gi|312149267|gb|ADQ29338.1| outer membrane protein [Borrelia burgdorferi N40]
Length = 381
Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 45/111 (40%), Gaps = 3/111 (2%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGL 103
++ + F +S+ I + + + + + + LIEGH ++ G L
Sbjct: 269 GINLSFDIEFYPNSFQILQKEYKKIDLIAKLLEKFKKNNILIEGHTEQFGLEEEMHELSE 328
Query: 104 RRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+RA A+ NY + + ++ +G + P AKNRR + +
Sbjct: 329 KRARAIGNYLIKMKVKDKDQILFKGWGSQKPKYPKSSPL-KAKNRRVEITI 378
>gi|312148404|gb|ADQ31063.1| outer membrane protein [Borrelia burgdorferi JD1]
Length = 381
Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 45/111 (40%), Gaps = 3/111 (2%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGL 103
++ + F +S+ I + + + + + + LIEGH ++ G L
Sbjct: 269 GINLSFDIEFYPNSFQILQKEYKKIDLIAKLLEKFKKNNILIEGHTEQFGLEEEMHELSE 328
Query: 104 RRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+RA A+ NY + + ++ +G + P AKNRR + +
Sbjct: 329 KRARAIGNYLIKMKVKDKDQILFKGWGSQKPKYPKSSPL-KAKNRRVEITI 378
>gi|225549312|ref|ZP_03770285.1| outer membrane protein [Borrelia burgdorferi 94a]
gi|225370170|gb|EEG99610.1| outer membrane protein [Borrelia burgdorferi 94a]
Length = 389
Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 45/111 (40%), Gaps = 3/111 (2%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGL 103
++ + F +S+ I + + + + + + LIEGH ++ G L
Sbjct: 277 GINLSFDIEFYPNSFQILQKEYKKIDLIAKLLEKFKKNNILIEGHTEQFGLEEEMHELSE 336
Query: 104 RRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+RA A+ NY + + ++ +G + P AKNRR + +
Sbjct: 337 KRARAIGNYLIKMKVKDKDQILFKGWGSQKPKYPKSSPL-KAKNRRVEITI 386
>gi|223889267|ref|ZP_03623855.1| outer membrane protein [Borrelia burgdorferi 64b]
gi|223885300|gb|EEF56402.1| outer membrane protein [Borrelia burgdorferi 64b]
Length = 333
Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 45/111 (40%), Gaps = 3/111 (2%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGL 103
++ + F +S+ I + + + + + + LIEGH ++ G L
Sbjct: 221 GINLSFDIEFYPNSFQILQKEYKKIDLIAKLLEKFKKNNILIEGHTEQFGLEEEMHELSE 280
Query: 104 RRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+RA A+ NY + + ++ +G + P AKNRR + +
Sbjct: 281 KRARAIGNYLIKMKVKDKDQILFKGWGSQKPKYPKSSPL-KAKNRRVEITI 330
>gi|225552144|ref|ZP_03773084.1| outer membrane protein [Borrelia sp. SV1]
gi|225371142|gb|EEH00572.1| outer membrane protein [Borrelia sp. SV1]
Length = 381
Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 45/111 (40%), Gaps = 3/111 (2%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGL 103
++ + F +S+ I + + + + + + LIEGH ++ G L
Sbjct: 269 GINLSFDIEFYPNSFQILQKEYKKIDLIAKLLEKFKKNNILIEGHTEQFGLEEEMHELSE 328
Query: 104 RRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+RA A+ NY + + ++ +G + P AKNRR + +
Sbjct: 329 KRARAIGNYLIKMKVKDKDQILFKGWGSQKPKYPKSSPL-KAKNRRVEITI 378
>gi|226320927|ref|ZP_03796478.1| outer membrane protein [Borrelia burgdorferi 29805]
gi|226233699|gb|EEH32429.1| outer membrane protein [Borrelia burgdorferi 29805]
Length = 381
Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 45/111 (40%), Gaps = 3/111 (2%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGL 103
++ + F +S+ I + + + + + + LIEGH ++ G L
Sbjct: 269 GINLSFDIEFYPNSFQILQKEYKKIDLIAKLLEKFKKNNILIEGHTEQFGLEEEMHELSE 328
Query: 104 RRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+RA A+ NY + + ++ +G + P AKNRR + +
Sbjct: 329 KRARAIGNYLIKMKVKDKDQILFKGWGSQKPKYPKSSPL-KAKNRRVEITI 378
>gi|195941898|ref|ZP_03087280.1| outer membrane protein (tpn50) [Borrelia burgdorferi 80a]
Length = 380
Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 45/111 (40%), Gaps = 3/111 (2%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGL 103
++ + F +S+ I + + + + + + LIEGH ++ G L
Sbjct: 268 GINLSFDIEFYPNSFQILQKEYKKIDLIAKLLEKFKKNNILIEGHTEQFGLEEEMHELSE 327
Query: 104 RRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+RA A+ NY + + ++ +G + P AKNRR + +
Sbjct: 328 KRARAIGNYLIKMKVKDKDQILFKGWGSQKPKYPKSSPL-KAKNRRVEITI 377
>gi|218249525|ref|YP_002374694.1| outer membrane protein [Borrelia burgdorferi ZS7]
gi|221217420|ref|ZP_03588891.1| outer membrane protein [Borrelia burgdorferi 72a]
gi|224533995|ref|ZP_03674579.1| outer membrane protein [Borrelia burgdorferi CA-11.2a]
gi|225549874|ref|ZP_03770836.1| outer membrane protein [Borrelia burgdorferi 118a]
gi|226321923|ref|ZP_03797448.1| outer membrane protein [Borrelia burgdorferi Bol26]
gi|218164713|gb|ACK74774.1| outer membrane protein [Borrelia burgdorferi ZS7]
gi|221192698|gb|EEE18914.1| outer membrane protein [Borrelia burgdorferi 72a]
gi|224512831|gb|EEF83198.1| outer membrane protein [Borrelia burgdorferi CA-11.2a]
gi|225369565|gb|EEG99016.1| outer membrane protein [Borrelia burgdorferi 118a]
gi|226232513|gb|EEH31267.1| outer membrane protein [Borrelia burgdorferi Bol26]
Length = 381
Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 45/111 (40%), Gaps = 3/111 (2%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGL 103
++ + F +S+ I + + + + + + LIEGH ++ G L
Sbjct: 269 GINLSFDIEFYPNSFQILQKEYKKIDLIAKLLEKFKKNNILIEGHTEQFGLEEEMHELSE 328
Query: 104 RRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+RA A+ NY + + ++ +G + P AKNRR + +
Sbjct: 329 KRARAIGNYLIKMKVKDKDQILFKGWGSQKPKYPKSSPL-KAKNRRVEITI 378
>gi|126738442|ref|ZP_01754147.1| OmpA domain protein [Roseobacter sp. SK209-2-6]
gi|126720241|gb|EBA16947.1| OmpA domain protein [Roseobacter sp. SK209-2-6]
Length = 518
Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 42/107 (39%), Gaps = 7/107 (6%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLE---KHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
F+T S + L LE + G +D G+ ++ + L+RA AV
Sbjct: 411 FETGSARPDAQSRSNIEQLARALETGLYDGRKLVFAGFSDGDGAAAANRKIALKRATAVR 470
Query: 111 NYFVARGIS----ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +A ++V ++G+ +P + NRR V++
Sbjct: 471 DAVLAAAEPESAARVVIEVEAFGEALPMACDNSAWGRQVNRRVEVWV 517
>gi|15594512|ref|NP_212301.1| outer membrane protein (tpn50) [Borrelia burgdorferi B31]
gi|216264209|ref|ZP_03436201.1| outer membrane protein [Borrelia burgdorferi 156a]
gi|2688065|gb|AAC66563.1| outer membrane protein (tpn50) [Borrelia burgdorferi B31]
gi|215980682|gb|EEC21489.1| outer membrane protein [Borrelia burgdorferi 156a]
Length = 389
Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 45/111 (40%), Gaps = 3/111 (2%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGL 103
++ + F +S+ I + + + + + + LIEGH ++ G L
Sbjct: 277 GINLSFDIEFYPNSFQILQKEYKKIDLIAKLLEKFKKNNILIEGHTEQFGLEEEMHELSE 336
Query: 104 RRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+RA A+ NY + + ++ +G + P AKNRR + +
Sbjct: 337 KRARAIGNYLIKMKVKDKDQILFKGWGSQKPKYPKSSPL-KAKNRRVEITI 386
>gi|254975524|ref|ZP_05271996.1| hypothetical protein CdifQC_09444 [Clostridium difficile QCD-66c26]
gi|255092912|ref|ZP_05322390.1| hypothetical protein CdifC_09699 [Clostridium difficile CIP 107932]
gi|255314653|ref|ZP_05356236.1| hypothetical protein CdifQCD-7_09900 [Clostridium difficile
QCD-76w55]
gi|255517327|ref|ZP_05385003.1| hypothetical protein CdifQCD-_09486 [Clostridium difficile
QCD-97b34]
gi|255650433|ref|ZP_05397335.1| hypothetical protein CdifQCD_09639 [Clostridium difficile
QCD-37x79]
gi|260683545|ref|YP_003214830.1| hypothetical protein CD196_1809 [Clostridium difficile CD196]
gi|260687205|ref|YP_003218339.1| hypothetical protein CDR20291_1852 [Clostridium difficile R20291]
gi|306520411|ref|ZP_07406758.1| hypothetical protein CdifQ_11096 [Clostridium difficile QCD-32g58]
gi|260209708|emb|CBA63457.1| putative membrane protein [Clostridium difficile CD196]
gi|260213222|emb|CBE04721.1| putative membrane protein [Clostridium difficile R20291]
Length = 210
Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 59/168 (35%), Gaps = 21/168 (12%)
Query: 6 IFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQF-----SSSVGDSVFFDTSSYS 60
I I+ S+ ++ D +S + +S + + + G+ FD S
Sbjct: 34 ILILFSSESISGSVEQDLAKNVNASVEETFKKSKIPVKVDKSNGQVTFGEKTMFDVDSDV 93
Query: 61 IRPADIQVLSN--------LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
++P ++L + + +IEGH D++GS ++ L RRAY+V +
Sbjct: 94 LKPEAKEMLKMFVPKYIETIYKDYGDYISKIVIEGHTDDVGSYIYNLDLSQRRAYSVAKF 153
Query: 113 --------FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ + + K G + +RR +
Sbjct: 154 IVGDEIGDYKYKDKVTKHIIAIGRSKAELIKNGDNSVNRDASRRVELK 201
>gi|299133623|ref|ZP_07026817.1| OmpA/MotB domain protein [Afipia sp. 1NLS2]
gi|298591459|gb|EFI51660.1| OmpA/MotB domain protein [Afipia sp. 1NLS2]
Length = 275
Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 24/152 (15%), Positives = 47/152 (30%), Gaps = 10/152 (6%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
A+ S+ +++ + ++ + + D F S
Sbjct: 114 FALASASLRQALQDMPEMTELSKHIMFEETKQGLNLEIVDQDGRSMFAEGSREPYERTRM 173
Query: 68 VLSNLGSWLEKHDCDFLIEGHADELGSRNSS----IALGLRRAYAVFNYFVARGISASRM 123
++ L + L + I GH + L RA AV G+ ++ +
Sbjct: 174 LIRKLAAPLRQSPLRVAIVGHTSSDFTSPRPGYDAFDLSADRANAVRQILERAGLPSTHI 233
Query: 124 -KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
V+ P D+ + A NRR + L
Sbjct: 234 FSVSGKADSEPLFP--DDPSLAANRRVTITLM 263
>gi|302347069|ref|YP_003815367.1| OmpA family protein [Prevotella melaninogenica ATCC 25845]
gi|302150976|gb|ADK97237.1| OmpA family protein [Prevotella melaninogenica ATCC 25845]
Length = 225
Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 58/134 (43%), Gaps = 5/134 (3%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ ++ + +++ + + + F + ++ + L+ S ++++
Sbjct: 80 EAAQQLPNARVDKVTDANGLDCVKVTFDSGILFPLNGSNLSASAKNDLTKFASLMQRNSN 139
Query: 82 -DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHD 139
D I+G+ D G+ N ++ L RRA AV +Y RG+S+ ++ V +G P
Sbjct: 140 CDVAIQGYTDASGNDNINLPLSQRRADAVSSYLKGRGVSSRQIRSVQGFGSANPI-ENKT 198
Query: 140 EDAYAKNRRAIVFL 153
NRR V+L
Sbjct: 199 VS--QANRRVEVYL 210
>gi|118591641|ref|ZP_01549037.1| OmpA/MotB [Stappia aggregata IAM 12614]
gi|118435634|gb|EAV42279.1| OmpA/MotB [Stappia aggregata IAM 12614]
Length = 222
Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 51/137 (37%), Gaps = 6/137 (4%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW---LE 77
+D + + P + ++ + FD +S S+R L+ L +
Sbjct: 84 VDREEVAATPPSGDGAPVTAATDPLPTIDMEILFDYNSASLRHDQAAKLAELSRMLSQEK 143
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVY 136
+ FL+ GH D GS ++ L +RA + + A G + R+ + G
Sbjct: 144 FKNYRFLLLGHTDAKGSAQYNLTLSQQRAQTIAGFVTAWGSLSEERVLASGMGASK-LKD 202
Query: 137 GHDEDAYAKNRRAIVFL 153
D +NRR + L
Sbjct: 203 QGDPYGE-QNRRVQLVL 218
>gi|283784104|ref|YP_003363969.1| lateral flagellar motor protein B [Citrobacter rodentium ICC168]
gi|282947558|emb|CBG87111.1| lateral flagellar motor protein B [Citrobacter rodentium ICC168]
Length = 331
Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 53/149 (35%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ + + +T L + + + D F+ S I P
Sbjct: 139 SATELGELATSIQSIARKAHMETNLEMEIVPQGLRVLIKDDKNRNMFERGSARIMPFFQS 198
Query: 68 VLSNLGSWLEKHDCDFLIEGHADELGS---RNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L+ L + D +I GH D + ++ L RA + G+ ++
Sbjct: 199 LLTELAPVFDSLDNKIIITGHTDAMAYKSDIYNNWNLSGDRALSARRVLEQAGMPEDKVM 258
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + ++ A NRR + +
Sbjct: 259 QVSAMADQMLLDAKNPES-AGNRRIEIMV 286
>gi|189911990|ref|YP_001963545.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167776666|gb|ABZ94967.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
Length = 159
Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 43/104 (41%), Gaps = 3/104 (2%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
+++F S I D+ L + + + + I+ HA E + +I + +R+ V
Sbjct: 54 TIYFAKKSNLIPKPDLVRLQTVADFLNRNRNYEIHIDAHAVEGKNNEENIMISEKRSLEV 113
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ + + ++++ YG ++ A NRR + L
Sbjct: 114 ERFLLIHFVEPNQIRRLFYGNTK--SPNQTKEHEALNRRVEIQL 155
>gi|86136231|ref|ZP_01054810.1| hypothetical protein MED193_18949 [Roseobacter sp. MED193]
gi|85827105|gb|EAQ47301.1| hypothetical protein MED193_18949 [Roseobacter sp. MED193]
Length = 367
Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 27/80 (33%), Gaps = 9/80 (11%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYA--------VFNYF-VARGISASRMKVTSYGKEMP 133
IEGH D R ++ L RRA V M V+ YG+ P
Sbjct: 260 VQIEGHTDSDRGRIDNVTLSTRRANETFFAIREEVAGILAHRNLRDQPVMSVSGYGEMRP 319
Query: 134 SVYGHDEDAYAKNRRAIVFL 153
+ A NRR + +
Sbjct: 320 IETNETTEGKAANRRIDLRI 339
>gi|283782103|ref|YP_003372858.1| OmpA/MotB domain-containing protein [Pirellula staleyi DSM 6068]
gi|283440556|gb|ADB18998.1| OmpA/MotB domain protein [Pirellula staleyi DSM 6068]
Length = 261
Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 51/156 (32%), Gaps = 13/156 (8%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSS-------SVGDSVFFDTSSYSIRP 63
S++ M+++G + + + ++G V+F S ++
Sbjct: 73 SSMAAMALTGRAKRAKVVQGGVKSKGTTGENQHVRIVRPGDRTTIGTVVYFSEDSATLSE 132
Query: 64 ADIQVLSNLGSWLEKHDCDFLIEGHAD-----ELGSRNSSIALGLRRAYAVFNYFVARG- 117
L + GH + L +R+ AV + V R
Sbjct: 133 DAEVDLLGAAETFAGKPQKIELRGHTSRGTPAADSVFKDNWELAYKRSLAVMHVLVDRMK 192
Query: 118 ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
I R++++ G P G D + +N R VFL
Sbjct: 193 IDPKRIRISVAGPFEPVHTGIDPEKLKQNPRVEVFL 228
>gi|296313331|ref|ZP_06863272.1| OmpA family protein [Neisseria polysaccharea ATCC 43768]
gi|296840145|gb|EFH24083.1| OmpA family protein [Neisseria polysaccharea ATCC 43768]
Length = 231
Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 44/113 (38%), Gaps = 1/113 (0%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKH 79
++ D +P V+ ++ + S+ F +R L L + +
Sbjct: 61 VECGDAVEPAPVAVVEQAPQYVDETVSLSAKTLFGFDKDVLRAEAQDNLKVLAQRLGQTN 120
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
+EGH D +GS + L RRA V NY V+ G+ AS+ G+
Sbjct: 121 VQSVRVEGHTDFMGSEKYNQTLSERRANVVANYLVSNGVPASKTSAVGLGESQ 173
>gi|119387029|ref|YP_918084.1| OmpA/MotB domain-containing protein [Paracoccus denitrificans
PD1222]
gi|119377624|gb|ABL72388.1| OmpA/MotB domain protein [Paracoccus denitrificans PD1222]
Length = 711
Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 8/104 (7%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGS-----WLEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
+ FDT S +I P Q L+ LG + ++IEG+ D +GS +++AL RRA
Sbjct: 598 ITFDTGSSAITPDQAQELATLGKVIRDSIDQDPREIYMIEGYTDAVGSDAANLALSDRRA 657
Query: 107 YAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
+V M V YG++ V + +NRR
Sbjct: 658 ESVALALTEYFQVPPENMVVQGYGEQFLLVPTDGPE--RQNRRV 699
>gi|225024563|ref|ZP_03713755.1| hypothetical protein EIKCOROL_01438 [Eikenella corrodens ATCC
23834]
gi|224942714|gb|EEG23923.1| hypothetical protein EIKCOROL_01438 [Eikenella corrodens ATCC
23834]
Length = 176
Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 51/144 (35%), Gaps = 12/144 (8%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW---LEKHDCD 82
+ V+ ++ S+ F + + + P L L + H
Sbjct: 33 EEAPVAQPVVAAPQVERINLSADALFRFNQSDAADMLPEGKATLDRLAENLVSRQAHIDS 92
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD--- 139
+ GH D LGS + LGLRRA V NY +G+ A + V S G+ P
Sbjct: 93 IALTGHTDRLGSEQYNYNLGLRRAQTVKNYLQDKGVQAP-ISVASAGESQPVTTACTGTR 151
Query: 140 -----EDAYAKNRRAIVFLKGCRA 158
+ +RR V + G A
Sbjct: 152 ATAALKACLQPDRRVTVDISGTAA 175
>gi|86748026|ref|YP_484522.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
gi|86571054|gb|ABD05611.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
Length = 208
Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 6/111 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALG 102
++ + FD +S ++ P L +LG L D ++ GH D G + + +L
Sbjct: 90 PTIDLEINFDYNSATLSPRAEPQLKSLGDALTSSDLKNSIVMLAGHTDAKGGDDYNQSLS 149
Query: 103 LRRAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
RRA AV Y + R + YG++ + A A+NRR +
Sbjct: 150 ERRAEAVKRYLIERYRIQPDNLVAVGYGEKQ-LKSSAEPLA-AENRRVQIV 198
>gi|251733439|emb|CAR82469.1| peptidoglycan-associated lipoprotein [Sinorhizobium americanum]
Length = 87
Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 56 TSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
T S SIR L+ W + + IEGHADE G+R ++ALG RRA A Y
Sbjct: 1 TDSSSIRADAQATLARQAQWLAKYPNYAITIEGHADERGTREYNLALGARRAAATREYLA 60
Query: 115 ARGISASRMKVTSYGKEMPSVYGHD 139
+G+ A+RM+ SYGKE P D
Sbjct: 61 GQGVPANRMRTISYGKEKPVAVCDD 85
>gi|71907735|ref|YP_285322.1| OmpA/MotB [Dechloromonas aromatica RCB]
gi|71847356|gb|AAZ46852.1| OmpA/MotB [Dechloromonas aromatica RCB]
Length = 183
Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 26/143 (18%), Positives = 54/143 (37%), Gaps = 3/143 (2%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDS--VFFDTSSYSIRPADIQVLSNLGSW 75
++ + +S ++ E+ + + D VFF S ++ + + +L
Sbjct: 41 LAPTPTVPLSANSSLSMEAHPEPTEKGAREIRDDECVFFSLGSSTVSNKEKYKIDSLARR 100
Query: 76 LEKHDCDF-LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
L + GHA++ GS + ++A+ R AV G+ S+++ G E
Sbjct: 101 LLDDKSLVATLIGHANDNGSSSFNLAVSDSRVMAVAERLRNHGVQRSQIRKEVLGSERTP 160
Query: 135 VYGHDEDAYAKNRRAIVFLKGCR 157
E+ ++RR R
Sbjct: 161 KSCRSEECRLRSRRVEFVFTKQR 183
>gi|134292850|ref|YP_001116586.1| OmpA/MotB domain-containing protein [Burkholderia vietnamiensis G4]
gi|134136007|gb|ABO57121.1| OmpA/MotB domain protein [Burkholderia vietnamiensis G4]
Length = 226
Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 26/102 (25%), Positives = 39/102 (38%), Gaps = 5/102 (4%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGS----RNS 97
+ V F+ + P VL+ + L +H D L+EGH D + S
Sbjct: 109 GIEIGIDAKVLFNVGDARLLPDAAPVLTQIARALSEHASGDILVEGHTDNVPIANAKYES 168
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ L RA +V Y RG++ R+ P V G D
Sbjct: 169 NWELSSARAGSVVRYLAERGVAPHRLAAIGRADTQPLVTGDD 210
>gi|163786938|ref|ZP_02181386.1| hypothetical protein FBALC1_17172 [Flavobacteriales bacterium
ALC-1]
gi|159878798|gb|EDP72854.1| hypothetical protein FBALC1_17172 [Flavobacteriales bacterium
ALC-1]
Length = 278
Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 31/158 (19%), Positives = 49/158 (31%), Gaps = 31/158 (19%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ IF+ LS S + V+FDT Y+
Sbjct: 1 MKALLIFLTLSFQLAFS---------------------------QQELKHEVYFDTDKYN 33
Query: 61 -IRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
++L L E I G D+ GS N ++ L +RA A+ F
Sbjct: 34 IPETEHSRLLLFLSKVEEMDIEKISIYGFCDDRGSDNYNLVLSQQRADAIKTVFSNNEFD 93
Query: 120 ASRMK-VTSYGK--EMPSVYGHDEDAYAKNRRAIVFLK 154
S + V G+ + NR+ + +K
Sbjct: 94 ESVITNVDGKGEILLNIVHEENLSKIRGLNRKVEIIVK 131
Score = 37.5 bits (85), Expect = 0.60, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 47/114 (41%), Gaps = 13/114 (11%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHA-------DELGSRNSSI 99
+ D++ F T + VL + E+ + F IEGH D + +
Sbjct: 161 LLDNLLFRTGYSYLTKESKPVLDKIAVILAERTNVYFTIEGHVCCTQGERDAIDRKTKKR 220
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L + RA +++Y V +G+ RMK ++ P G + + +RR + +
Sbjct: 221 NLSVARAKYIYDYLVKKGVRPYRMKFVGMRRKEPL--GGEPE---FDRRVEILV 269
>gi|163789217|ref|ZP_02183659.1| hypothetical protein FBALC1_00030 [Flavobacteriales bacterium
ALC-1]
gi|159875432|gb|EDP69494.1| hypothetical protein FBALC1_00030 [Flavobacteriales bacterium
ALC-1]
Length = 238
Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 31/158 (19%), Positives = 49/158 (31%), Gaps = 31/158 (19%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ IF+ LS S + V+FDT Y+
Sbjct: 1 MKALLIFLTLSFQLAFS---------------------------QQELKHEVYFDTDKYN 33
Query: 61 -IRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
++L L E I G D+ GS N ++ L +RA A+ F
Sbjct: 34 IPETEHSRLLLFLSKVEEMDIEKISIYGFCDDRGSDNYNLVLSQQRADAIKTVFSNNEFD 93
Query: 120 ASRMK-VTSYGK--EMPSVYGHDEDAYAKNRRAIVFLK 154
S + V G+ + NR+ + +K
Sbjct: 94 ESVITNVDGKGEILLNIVHEENLSKIRGLNRKVEIIVK 131
>gi|114320660|ref|YP_742343.1| OmpA/MotB domain-containing protein [Alkalilimnicola ehrlichii
MLHE-1]
gi|114227054|gb|ABI56853.1| OmpA/MotB domain protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 285
Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 43/119 (36%), Gaps = 7/119 (5%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSIAL 101
+ FD S +R ++LS L LE+ I GH D ++ L
Sbjct: 155 VDAENRPMFDLGSARLRSYAAEILSGLTGVLERVPNALRISGHTDARPFVGRRDYTNWEL 214
Query: 102 GLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
RA A A GI+ R+ +V + P + A NRR + L A+
Sbjct: 215 STDRANAARRTLTASGIAPYRVAQVVGVAETQPLDP-DNPMA-PVNRRISIILLTPEAD 271
>gi|209745374|gb|ACI70994.1| putative motility protein [Escherichia coli]
Length = 261
Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 75 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVQIKDDQNRNMFERGSAQIMPFFKT 134
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 135 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 194
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 195 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 222
>gi|320643247|gb|EFX12446.1| hypothetical protein ECO9389_21954 [Escherichia coli O157:H- str.
493-89]
gi|320648894|gb|EFX17512.1| hypothetical protein ECO2687_10031 [Escherichia coli O157:H- str. H
2687]
Length = 256
Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 70 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVQIKDDQNRNMFERGSAQIMPFFKT 129
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 130 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 189
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 190 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 217
>gi|149202957|ref|ZP_01879928.1| OmpA/MotB [Roseovarius sp. TM1035]
gi|149143503|gb|EDM31539.1| OmpA/MotB [Roseovarius sp. TM1035]
Length = 518
Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 38/97 (39%), Gaps = 4/97 (4%)
Query: 62 RPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS 121
++ + L+ + G +D G ++ + LRRA V + +A+
Sbjct: 422 SRSNAEQLARAMELGHYDARRLVFVGFSDGDGPAGTNRDIALRRAETVQRAVMRAAETAN 481
Query: 122 R----MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+++ ++G+ MP NRR V+++
Sbjct: 482 LERIGLELDAFGEAMPMACDDTAWGRQVNRRVEVWVR 518
>gi|225874275|ref|YP_002755734.1| chemotaxis protein MotB [Acidobacterium capsulatum ATCC 51196]
gi|225793995|gb|ACO34085.1| chemotaxis protein MotB [Acidobacterium capsulatum ATCC 51196]
Length = 270
Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 40/108 (37%), Gaps = 11/108 (10%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR----NSSIALGLRRAYA 108
FFD+ S + ++L L L IEG+ D ++ L RA A
Sbjct: 132 FFDSGSSKLSAGGKEMLKLLAQQLGGVPNRITIEGYTDAKPYPGKDGYTNWDLSADRANA 191
Query: 109 VFNYFVARGISASRM-KVTSYGKEMPSVYGH--DEDAYAKNRRAIVFL 153
A G+ A ++ +V YG + + D NRR + +
Sbjct: 192 ARRLMQASGLHAGQVAEVRGYGDQNLRLPNKPFDPT----NRRITIVV 235
>gi|167946711|ref|ZP_02533785.1| hypothetical protein Epers_09238 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 36
Score = 46.3 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 24/35 (68%)
Query: 118 ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ +++ V SYG+E P+ + ++E+A+A NRR +
Sbjct: 1 MDTNQLIVISYGEERPASFANNEEAWALNRRVELV 35
>gi|328947792|ref|YP_004365129.1| OmpA/MotB domain protein [Treponema succinifaciens DSM 2489]
gi|328448116|gb|AEB13832.1| OmpA/MotB domain protein [Treponema succinifaciens DSM 2489]
Length = 1053
Score = 46.3 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 25/54 (46%)
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L +RA V + V GI++SR+ V G P D + KNRR L+
Sbjct: 999 LSEQRAEYVKSQLVKFGINSSRLSVEGKGGTEPVADRKDTNVNWKNRRVEFILE 1052
>gi|251733451|emb|CAR82475.1| pal [Rhizobium giardinii]
Length = 87
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 37/85 (43%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 56 TSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
T S SIR L W + IEGHADE G+R ++ALG RRA A +Y
Sbjct: 1 TDSTSIRADAQATLDKQAQWLQRYPNYAITIEGHADERGTREYNLALGARRAAATRDYLA 60
Query: 115 ARGISASRMKVTSYGKEMPSVYGHD 139
+RGI A +MK SYGKE P D
Sbjct: 61 SRGIPAGKMKTISYGKEKPVAVCDD 85
>gi|110634419|ref|YP_674627.1| OmpA/MotB [Mesorhizobium sp. BNC1]
gi|110285403|gb|ABG63462.1| OmpA/MotB [Chelativorans sp. BNC1]
Length = 703
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 8/108 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWL-----EKHDCDFLIEGHADELGSRNSSIALGLR 104
D++ F+ S SI ++I L + + + FLIEGH D +GS +++AL R
Sbjct: 584 DTINFEFGSASIAESEIPKLEGVANAMLEVLERNPAETFLIEGHTDAVGSDVANLALSDR 643
Query: 105 RAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA AV GI + YG++ + + ++ +NRR +
Sbjct: 644 RADAVAEALSNVFGIPPENLVTQGYGEQYLKI--NTQERERENRRVAI 689
>gi|262199615|ref|YP_003270824.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
gi|262082962|gb|ACY18931.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
Length = 342
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 39/106 (36%), Gaps = 4/106 (3%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD----ELGSRNSSIALGLRRAY 107
+F + ++ V +I GH D + ++ L LRRA
Sbjct: 224 LFRRSGDALRTRSEAVVDHLADLLERHPSVRIVIVGHVDPGELDDEDADAEHTLSLRRAE 283
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V + RG+S R++V E P G A+NRR V +
Sbjct: 284 TVREALIRRGVSVRRLEVWDAAAEFPLSEGSSSHERARNRRVTVRV 329
>gi|61655681|gb|AAX49327.1| PlpD [Mannheimia haemolytica]
gi|61655685|gb|AAX49329.1| PlpD [Mannheimia glucosida]
Length = 217
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 41/100 (41%), Gaps = 2/100 (2%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRR 105
++ FD ++ +V+ N+ L+ + G+ D LGS ++ L RR
Sbjct: 114 TLTGDFLFDFDKATLTTKGKEVVDNVAQQLKASKAQQVKVAGYTDRLGSAAYNLDLSQRR 173
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ V V +G++A +++ YGK E A
Sbjct: 174 SNTVKARLVQQGVTA-QIEAVGYGKANQVKACDGETGQAL 212
>gi|116624960|ref|YP_827116.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116228122|gb|ABJ86831.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076]
Length = 276
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 40/108 (37%), Gaps = 7/108 (6%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSIALGLRRAY 107
+FF++ ++L L L K LIEGH D ++ L RA
Sbjct: 143 MFFESGRPLPTSTGSELLKRLAEELGKMPNHLLIEGHTDSKPFSGDGTYTNWELSSDRAN 202
Query: 108 AVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
A + + ++ +V +G E +A NRR V ++
Sbjct: 203 AARRLMESNAVRHEQVAQVRGFGDRQLRHPEDPE--HASNRRVSVIVQ 248
>gi|300776234|ref|ZP_07086093.1| outer membrane protein [Chryseobacterium gleum ATCC 35910]
gi|300505367|gb|EFK36506.1| outer membrane protein [Chryseobacterium gleum ATCC 35910]
Length = 136
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 52/131 (39%), Gaps = 8/131 (6%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI 85
+ ++ + + + + FD +S I P++ +L+N +++ + +
Sbjct: 2 PGPVENNGCPVATTGPVVETETKLEGIEFDLNSDRILPSNTPILNNAVNYINSSSGSYNV 61
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE-------MPSVYGH 138
G D G+ + L RRA V NY + G+ +++ G++ P+
Sbjct: 62 IGATDTRGTDAYNQKLSERRANNVKNYLIKNGVQTGKLQAIGKGEKDLKYPECEPATKCP 121
Query: 139 DEDAYAKNRRA 149
+ A NRR
Sbjct: 122 EWKNRA-NRRV 131
>gi|84385694|ref|ZP_00988725.1| hypothetical protein V12B01_26209 [Vibrio splendidus 12B01]
gi|84379674|gb|EAP96526.1| hypothetical protein V12B01_26209 [Vibrio splendidus 12B01]
Length = 187
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 59/146 (40%), Gaps = 2/146 (1%)
Query: 10 LSAITMMSISGIDN-LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
+S + + +S N + K +N + S+ + + T +S+ Q
Sbjct: 43 VSGVLSVEVSEKKNIVQNKKVIKTDAINVTDACVFDQESMSLLLNYKTDKHSLTDKHKQA 102
Query: 69 LSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSY 128
++ L D +IEGH D++GS+ + L RR + Y +R+ ++
Sbjct: 103 IA-QYLELVDQDKKIVIEGHTDDIGSKAYNKKLSQRRTSSATVYLKKNLGLGNRIIEKAF 161
Query: 129 GKEMPSVYGHDEDAYAKNRRAIVFLK 154
G+ P + A NRR I+ +K
Sbjct: 162 GESSPICKVEENAASGCNRRVILTIK 187
>gi|331675914|ref|ZP_08376631.1| putative motility protein [Escherichia coli H591]
gi|331076474|gb|EGI47751.1| putative motility protein [Escherichia coli H591]
Length = 261
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 53/149 (35%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P +
Sbjct: 75 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKR 134
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 135 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 194
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 195 QVSAMADQMLLDSKNPQS-AGNRRIEIMV 222
>gi|300823443|ref|ZP_07103573.1| OmpA family protein [Escherichia coli MS 119-7]
gi|300524061|gb|EFK45130.1| OmpA family protein [Escherichia coli MS 119-7]
gi|320201151|gb|EFW75734.1| Flagellar motor rotation protein MotB [Escherichia coli EC4100B]
Length = 256
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 53/149 (35%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P +
Sbjct: 70 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKR 129
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 130 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 189
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 190 QVSAMADQMLLDSKNPQS-AGNRRIEIMV 217
>gi|289166115|ref|YP_003456253.1| Hypothetical protein of unknown function [Legionella longbeachae
NSW150]
gi|18693264|gb|AAL78305.1|AF288617_2 DotK [Legionella longbeachae]
gi|288859288|emb|CBJ13222.1| Hypothetical protein of unknown function [Legionella longbeachae
NSW150]
Length = 167
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 17/143 (11%), Positives = 52/143 (36%), Gaps = 1/143 (0%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL 72
++ + + + ++ + + S+ S F++ + ++ +L+ +
Sbjct: 21 CKVLGACDATIMKLAKNLNRKGVKVITIGQDYMISIPASYLFESETPHLKWKSYALLNEI 80
Query: 73 GSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
+ + I ++ + S AL L R+ V Y ++G+ + + G +
Sbjct: 81 AVFLKQFRKIAINIASYSSKYISPQREHALTLARSRVVSEYLWSQGVDSRFIFTQGLGSD 140
Query: 132 MPSVYGHDEDAYAKNRRAIVFLK 154
P + + + N R + +
Sbjct: 141 KPIIAYTEGGDSSVNARVEITFR 163
>gi|319955259|ref|YP_004166526.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
gi|319423919|gb|ADV51028.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
Length = 283
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 10/114 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRN----SSIA 100
S+ D + F + SY++ +VL + K D DF++EGH D++ +
Sbjct: 152 VSISDKLLFSSGSYNVTNRAKEVLGKVAKVVNNKPDFDFMVEGHTDDVPYNGGILLDNWD 211
Query: 101 LGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L +RA A+ + RM + +P AKNRR + +
Sbjct: 212 LSAKRATAIVRILQNDYNVDPKRMTAAARSSYVPVSTTD----KAKNRRTRIVV 261
>gi|308273805|emb|CBX30406.1| hypothetical protein N47_Q17290 [uncultured Desulfobacterium sp.]
Length = 185
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 60/132 (45%), Gaps = 9/132 (6%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGD--------SVFFDTSSYSIRPADIQVLSNLG 73
S T + ++ Q F ++ ++FD S ++ +++ ++
Sbjct: 44 AKDSQSPPSASTPIADADTQTIFREALSAKPLAPQSFILYFDFDSNNLTAESNKLIDDIL 103
Query: 74 SWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
+++ D + GH D G+ + + +L ++RA AV + V RGI + ++++S+G+
Sbjct: 104 QAIKERDSQDIPVVGHTDRAGNPDYNFSLSMQRATAVRDLLVNRGIKSEFIQISSHGEGN 163
Query: 133 PSVYGHDEDAYA 144
P + D A A
Sbjct: 164 PLIPTADNVAEA 175
>gi|299141391|ref|ZP_07034528.1| outer membrane protein [Prevotella oris C735]
gi|298577351|gb|EFI49220.1| outer membrane protein [Prevotella oris C735]
Length = 425
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 58/139 (41%), Gaps = 8/139 (5%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS-NLG 73
M ++ P + ++ ++ + +V+F +S I + + L
Sbjct: 291 MTKVTEQVEQSKTTERPVSEVSVAAAESVAIVDFP-TVYFAFNSARISSKEEAKMQQMLH 349
Query: 74 SWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
+ + ++ G D +GS ++ L +RRA A+ + +GI+A+R+K G++
Sbjct: 350 LLQDNPKLNIIVTGWCDTVGSDAVNLRLSVRRAKALKTWLTTQGINAARIKTAGKGRDF- 408
Query: 134 SVYGHDEDAYAKNRRAIVF 152
+E AK RR+
Sbjct: 409 -----NEKNAAKARRSETV 422
>gi|209917443|ref|YP_002291527.1| hypothetical protein ECSE_0251 [Escherichia coli SE11]
gi|209910702|dbj|BAG75776.1| putative motility protein [Escherichia coli SE11]
Length = 262
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 53/149 (35%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P +
Sbjct: 76 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKR 135
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 136 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 195
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 196 QVSAMADQMLLDSKNPQS-AGNRRIEIMV 223
>gi|153875680|ref|ZP_02003374.1| conserved hypothetical protein [Beggiatoa sp. PS]
gi|152067857|gb|EDN66627.1| conserved hypothetical protein [Beggiatoa sp. PS]
Length = 238
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 42/114 (36%), Gaps = 9/114 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHAD--------ELGSRNSSIA 100
++ F++ S++ I L + + + I H + + S +
Sbjct: 125 RNLSFNSGKASLKRGAIYQLKEMAAAFKTIAPLKIKIHSHTNIQTFKGIEQEESSKRNQI 184
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L RA + + GI +K +G P Y + A AKN+R + ++
Sbjct: 185 LSEERADTIADTLARLGIDRDYIKTFGHGYSQPLTYELTKAALAKNKRIEIKVE 238
>gi|319902507|ref|YP_004162235.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108]
gi|319417538|gb|ADV44649.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108]
Length = 223
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 53/134 (39%), Gaps = 7/134 (5%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ + + + + + + L S + F +S ++ L +L L+
Sbjct: 79 AAEAAKIEGAQVEQITDSNGLPA-VKVSFAAGILFGFNSAALSNDAKASLRDLAQILKDD 137
Query: 80 DCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYG 137
I GH D++G+ +++ + RAY+V NY G+S ++ K V G
Sbjct: 138 STTDIAIIGHTDKVGTYEANMKVSKNRAYSVENYLQDCGVSPAQFKKVEGVGYAQ-YDES 196
Query: 138 HDEDAYAKNRRAIV 151
D +NRR V
Sbjct: 197 KTAD---QNRRVEV 207
>gi|269104043|ref|ZP_06156740.1| outer membrane protein [Photobacterium damselae subsp. damselae CIP
102761]
gi|268163941|gb|EEZ42437.1| outer membrane protein [Photobacterium damselae subsp. damselae CIP
102761]
Length = 261
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 3/123 (2%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELG 93
+E L+EQ F + + PA Q L+ + L++H + GH D G
Sbjct: 117 YSEVELREQLELYFAVDNQFALNRSELLPAYQQALTQAAAILKRHRHWHVKLVGHTDTQG 176
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA--IV 151
++ + LGL RA V + + G++ ++ V S G+ H NR+ +
Sbjct: 177 QKHDNYHLGLTRANNVKRFLLEHGVNGHQVSVLSTGESQAVPDTHSRTMQLANRQVVAEI 236
Query: 152 FLK 154
+
Sbjct: 237 LVS 239
>gi|268316443|ref|YP_003290162.1| OmpA/MotB domain-containing protein [Rhodothermus marinus DSM 4252]
gi|262333977|gb|ACY47774.1| OmpA/MotB domain protein [Rhodothermus marinus DSM 4252]
Length = 496
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 47/128 (36%), Gaps = 5/128 (3%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEG 87
S + S++ +SV F+ ++ + VL L+ + + G
Sbjct: 366 DSVQARIVVEPTACDLISTL-ESVSFEFGRSTLTDSARAVLERNARVLQSCPELVVQLVG 424
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG--HDEDAYAK 145
+ D +G + L LRRA AV+NY+ +GI R+ G+ P
Sbjct: 425 YTDYVGGEAFNALLSLRRALAVYNYYQQQGIEPERLIFRGLGELPPPCPNPADRPGCREL 484
Query: 146 NRRAIVFL 153
RR +
Sbjct: 485 -RRVDTIV 491
>gi|30061847|ref|NP_836018.1| hypothetical protein S0298 [Shigella flexneri 2a str. 2457T]
gi|56479639|ref|NP_706230.2| hypothetical protein SF0277 [Shigella flexneri 2a str. 301]
gi|110804360|ref|YP_687879.1| hypothetical protein SFV_0301 [Shigella flexneri 5 str. 8401]
gi|30040091|gb|AAP15824.1| putative motility protein [Shigella flexneri 2a str. 2457T]
gi|56383190|gb|AAN41937.2| putative motility protein [Shigella flexneri 2a str. 301]
gi|110613908|gb|ABF02575.1| putative motility protein [Shigella flexneri 5 str. 8401]
gi|281599639|gb|ADA72623.1| putative motility protein [Shigella flexneri 2002017]
Length = 261
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 51/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 75 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKT 134
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + +I GH D + + ++ L RA + G+ ++
Sbjct: 135 LLVELAPVFDSLYNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 194
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 195 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 222
>gi|218130801|ref|ZP_03459605.1| hypothetical protein BACEGG_02395 [Bacteroides eggerthii DSM 20697]
gi|317474322|ref|ZP_07933598.1| OmpA family protein [Bacteroides eggerthii 1_2_48FAA]
gi|217987145|gb|EEC53476.1| hypothetical protein BACEGG_02395 [Bacteroides eggerthii DSM 20697]
gi|316909632|gb|EFV31310.1| OmpA family protein [Bacteroides eggerthii 1_2_48FAA]
Length = 225
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 61/137 (44%), Gaps = 11/137 (8%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ + + + V + ++L + + + F +S ++ L +L L++
Sbjct: 80 AAEAAKIEGAQVEVVKDANNL-DAVKVTFDSGILFAFNSSTLSNDAKASLRDLAKILKED 138
Query: 80 DCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYG 137
I GH D++G+ +++ + RAYAV NY G+S S+ +V G
Sbjct: 139 TTTDIAIIGHTDKVGTYEANMKVSKNRAYAVENYLQDCGVSPSQFKQVEGVGY------N 192
Query: 138 HDEDAYA--KNRRAIVF 152
+++ + +NRR ++F
Sbjct: 193 EYDESLSASQNRRVVIF 209
>gi|91786622|ref|YP_547574.1| Type I secretion outer membrane protein TolC [Polaromonas sp.
JS666]
gi|91695847|gb|ABE42676.1| Type I secretion outer membrane protein, TolC [Polaromonas sp.
JS666]
Length = 658
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAV 109
+++F S + A V+S + + D + GH D +G+ S+ LGLRRA A+
Sbjct: 554 TLYFQRGSTELTAASKAVMSRIKELAKARKALDITVIGHTDTMGTAESNEVLGLRRANAI 613
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G+ + + V S G+ V +NRRA + ++
Sbjct: 614 AKQMQQLGLRNTAIIVESNGERNLFVATPQNTNEPRNRRAEITVR 658
>gi|313646638|gb|EFS11097.1| lateral flagellar motor protein B [Shigella flexneri 2a str. 2457T]
gi|332761628|gb|EGJ91908.1| lateral flagellar motor protein B [Shigella flexneri 4343-70]
gi|332761679|gb|EGJ91958.1| lateral flagellar motor protein B [Shigella flexneri 2747-71]
gi|332764445|gb|EGJ94678.1| lateral flagellar motor protein B [Shigella flexneri K-671]
gi|332768577|gb|EGJ98759.1| ompA family protein [Shigella flexneri 2930-71]
gi|333008733|gb|EGK28197.1| lateral flagellar motor protein B [Shigella flexneri K-218]
gi|333009709|gb|EGK29159.1| lateral flagellar motor protein B [Shigella flexneri VA-6]
gi|333022107|gb|EGK41350.1| lateral flagellar motor protein B [Shigella flexneri K-304]
Length = 256
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 51/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 70 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKT 129
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + +I GH D + + ++ L RA + G+ ++
Sbjct: 130 LLVELAPVFDSLYNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 189
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 190 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 217
>gi|301167893|emb|CBW27478.1| putative sodium-driven polar flagellar protein [Bacteriovorax
marinus SJ]
Length = 288
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 32/140 (22%), Positives = 47/140 (33%), Gaps = 12/140 (8%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPA--DIQVLSNLGSWLEKHDCDFLIEGHA 89
+N + E V D + F S I I+V + L L D ++G++
Sbjct: 142 SDSVNIYEMPEGIKVKVKDKILFRYGSLRIANEQVSIEVYTRLVRLLTNKDWSVFVQGYS 201
Query: 90 D------ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG---HDE 140
E G + L RA AV + RG+ ++ YG P E
Sbjct: 202 SRGEVSTEDGKNMDAFELSAARASAVTRSLIRRGVKPDQISTVFYGDIRPENIPGRSQTE 261
Query: 141 DAYAKNRRAIVFLKGCRANT 160
A RR L+ NT
Sbjct: 262 IERAS-RRVDFILRKRDLNT 280
>gi|87121845|ref|ZP_01077731.1| flagellar motor aparatus [Marinomonas sp. MED121]
gi|86162874|gb|EAQ64153.1| flagellar motor aparatus [Marinomonas sp. MED121]
Length = 258
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 47/127 (37%), Gaps = 5/127 (3%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
+ +++ + + +I+ V+ +Q +V F++ + + L
Sbjct: 112 IKAMAEVVSEQIEITQLSNVVTVLQNGDQLIITVDGQTLFESGESELSWQSDYIFEELIK 171
Query: 75 WLEKHD-CDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
+ + I+GH D + S+ L RA V YF+ GI A RM T Y
Sbjct: 172 MFKFYFEFSINIKGHTDNIPIRTVKFPSNWELSAIRATTVLRYFLEEGIGAQRMTATGYA 231
Query: 130 KEMPSVY 136
+P
Sbjct: 232 DSVPIAP 238
>gi|114800514|ref|YP_760698.1| OmpA family protein [Hyphomonas neptunium ATCC 15444]
gi|114740688|gb|ABI78813.1| OmpA family protein [Hyphomonas neptunium ATCC 15444]
Length = 387
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 39/106 (36%), Gaps = 4/106 (3%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLE----KHDCDFLIEGHADELGSRNSSIALGLRRAY 107
V+F+ + V+ + + I GH D G+ + + L +RRA
Sbjct: 279 VYFEWDRSDVTSQAAAVIDQAVANIRSVEGCAAGSVTIVGHTDTSGNPDYNQRLSVRRAD 338
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V RGI+ + + G+ + D NRR+ V +
Sbjct: 339 VVAAALSERGIANTLITQDGKGETALAKATQDGVREPLNRRSEVTI 384
>gi|83941931|ref|ZP_00954393.1| OmpA domain protein [Sulfitobacter sp. EE-36]
gi|83847751|gb|EAP85626.1| OmpA domain protein [Sulfitobacter sp. EE-36]
Length = 520
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 42/97 (43%), Gaps = 4/97 (4%)
Query: 62 RPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS 121
+++Q L+ + L G +D G+ ++ + LRRA AV + ++A+
Sbjct: 424 SRSNVQQLARALEVGQYDARRLLFVGFSDGQGASFANRDIALRRAEAVRQAVITAAVTAN 483
Query: 122 ----RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ + ++G+ MP NRR V+++
Sbjct: 484 LERVTLDLDAFGEAMPMACDDTAWGRQANRRVEVWVR 520
>gi|327402535|ref|YP_004343373.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
16823]
gi|327318043|gb|AEA42535.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
Length = 396
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 34/150 (22%), Positives = 53/150 (35%), Gaps = 15/150 (10%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDS-----VFFDTSSYSIRPADIQVLSNLG 73
D + T + + + S D V+F + P L +
Sbjct: 246 CKCYTDDKDKNEQSTTVYMKQVADNDKMSTKDRIEKQEVYFGFGKTFLTPQAKAALDIVA 305
Query: 74 S-WLEKHDCDFLIEGHADELGSRNSSI-----ALGLRRAYAVFNYFVARGISASRMKVTS 127
E + G +E + + + +R AV Y +++GISA+R+K S
Sbjct: 306 KVMTENPTMSITVIGSNNEEEDKLAEKKDFYADMDTKRNQAVKEYLLSKGISATRLKSES 365
Query: 128 YGKEMP---SVYGHDEDAY-AKNRRAIVFL 153
G E P DED AKNRR I +
Sbjct: 366 KGNEEPSPEIKESDDEDLKLAKNRRVIFKV 395
>gi|61655677|gb|AAX49325.1| PlpD [Mannheimia haemolytica]
Length = 217
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 41/100 (41%), Gaps = 2/100 (2%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRR 105
++ FD ++ +V+ N+ L+ + G+ D LGS ++ L RR
Sbjct: 114 NLTGDFLFDFDKATLTTKGKEVVDNVAQQLKASKAQQVKVAGYTDRLGSAAYNLDLSQRR 173
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ V V +G++A +++ YGK E A
Sbjct: 174 SNTVKARLVQQGVTA-QIEAVGYGKANQVKACDGETGQAL 212
>gi|83855407|ref|ZP_00948937.1| OmpA domain protein [Sulfitobacter sp. NAS-14.1]
gi|83843250|gb|EAP82417.1| OmpA domain protein [Sulfitobacter sp. NAS-14.1]
Length = 520
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 42/97 (43%), Gaps = 4/97 (4%)
Query: 62 RPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS 121
+++Q L+ + L G +D G+ ++ + LRRA AV + ++A+
Sbjct: 424 SRSNVQQLARALEVGQYDARRLLFVGFSDGQGASFANRDIALRRAEAVRQAVITAAVTAN 483
Query: 122 ----RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ + ++G+ MP NRR V+++
Sbjct: 484 LERVTLDLDAFGEAMPMACDDTAWGRQANRRVEVWVR 520
>gi|331666564|ref|ZP_08367438.1| putative motility protein [Escherichia coli TA271]
gi|331065788|gb|EGI37672.1| putative motility protein [Escherichia coli TA271]
Length = 307
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 53/149 (35%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P +
Sbjct: 121 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKR 180
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 181 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 240
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 241 QVSAMADQMLLDSKNPQS-AGNRRIEIMV 268
>gi|251733477|emb|CAR82488.1| pal [Sinorhizobium fredii]
gi|251733479|emb|CAR82489.1| pal [Sinorhizobium fredii]
gi|251733481|emb|CAR82490.1| pal [Sinorhizobium fredii]
gi|251733483|emb|CAR82491.1| pal [Sinorhizobium fredii]
gi|251733519|emb|CAR82509.1| pal [Sinorhizobium xinjiangense]
Length = 87
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 56 TSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
T S SIR L+ W + + +EGHADE G+R ++ALG RRA A Y
Sbjct: 1 TDSSSIRADAQATLARQAQWLAKYPNYAITVEGHADERGTREYNLALGARRAAATREYLA 60
Query: 115 ARGISASRMKVTSYGKEMPSVYGHD 139
+G+ A+RM+ SYGKE P D
Sbjct: 61 GQGVPANRMRTISYGKEKPVAVCDD 85
>gi|255067169|ref|ZP_05319024.1| OmpA family protein [Neisseria sicca ATCC 29256]
gi|255048537|gb|EET44001.1| OmpA family protein [Neisseria sicca ATCC 29256]
Length = 253
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 54/148 (36%), Gaps = 21/148 (14%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGH 88
+ ++ + S+ F +RP + L++L L + IEGH
Sbjct: 68 EAVAAVQQAPEYVDETVSLSAKTLFGFDKDILRPEAQENLNSLAQRLSNENVQTVRIEGH 127
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK--- 145
D +GS + L RRA V NY V RG+ +S++ T G+ + E AK
Sbjct: 128 TDFMGSEEYNQNLSERRANVVANYLVGRGVPSSKVSATGLGESQAQMTATCEAEVAKLGK 187
Query: 146 -----------------NRRAIVFLKGC 156
+RR V ++
Sbjct: 188 KVSKAKKRAALIACIEPDRRVDVKIRST 215
>gi|160889745|ref|ZP_02070748.1| hypothetical protein BACUNI_02175 [Bacteroides uniformis ATCC 8492]
gi|270294032|ref|ZP_06200234.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|317478785|ref|ZP_07937937.1| OmpA family protein [Bacteroides sp. 4_1_36]
gi|156860737|gb|EDO54168.1| hypothetical protein BACUNI_02175 [Bacteroides uniformis ATCC 8492]
gi|270275499|gb|EFA21359.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|316905045|gb|EFV26847.1| OmpA family protein [Bacteroides sp. 4_1_36]
Length = 224
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 29/136 (21%), Positives = 56/136 (41%), Gaps = 11/136 (8%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ + + + V + + L S + F +S ++ L L L++
Sbjct: 80 AAEAAKIEGAQVEQVTDANGLPA-VKVSFAAGILFGFNSAALSNEAKASLRELAQILKED 138
Query: 80 DCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYG 137
I GH D++G+ +++ + RAYAV NY G+S ++ K V G
Sbjct: 139 PTTDIAIIGHTDKVGTYEANMKVSKNRAYAVENYLQDCGVSPAQFKKVEGVGY------N 192
Query: 138 HDEDAYA--KNRRAIV 151
+++ + +NRR V
Sbjct: 193 EYDESLSADQNRRVEV 208
>gi|42521994|ref|NP_967374.1| outer membrane protein A [Bdellovibrio bacteriovorus HD100]
gi|39574525|emb|CAE78367.1| outer membrane protein A [Bdellovibrio bacteriovorus HD100]
Length = 171
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 56/160 (35%), Gaps = 13/160 (8%)
Query: 4 STIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSS-----SVGDSVFFDTSS 58
T+ + L A + + +N+ + S ++ ++ F+ S
Sbjct: 13 LTLVLALGACSSKTKKEDENVIGQRGGRAPDSALSGAAGDLRKSSKFSTLSQNIRFNVGS 72
Query: 59 YSIRPADIQVLSNLGSWLEKH---DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA 115
+ + + L+ + S L+ I G D G + ++ L RA V +Y V+
Sbjct: 73 SELNASSRRALNEIASELKNTANSYEKIRISGLTDPQGDADRNLRLSEARATRVRDYLVS 132
Query: 116 RGISASRMKVTSYGKEMPSVYGH--DEDAYAKNRRAIVFL 153
RG+ +++ G A++RR +
Sbjct: 133 RGVPEDKLETVGKGA---VARDTLGTSSQMARDRRVDFEI 169
>gi|320183885|gb|EFW58714.1| Flagellar motor rotation protein MotB [Shigella flexneri CDC
796-83]
Length = 256
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 51/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ + + + L + + + D F+ S I P
Sbjct: 70 SATELGELATSITTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKT 129
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 130 LLVELAPVFDSLDNKIIITGHIDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 189
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 190 QVSAMADQMLLDSKNPQS-AGNRRIEIMV 217
>gi|251733521|emb|CAR82510.1| pal [Sinorhizobium xinjiangense]
Length = 87
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 56 TSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
T S SIR L+ W + + ++EGHADE G+R ++ALG RRA A Y
Sbjct: 1 TDSSSIRADAQATLARQAQWLAKYPNYAIIVEGHADERGTREYNLALGARRAAATREYLA 60
Query: 115 ARGISASRMKVTSYGKEMPSVYGHD 139
+G+ A+RM+ SYGKE P D
Sbjct: 61 GQGVPANRMRTISYGKEKPVAVCDD 85
>gi|323963541|gb|EGB59099.1| OmpA family protein [Escherichia coli H489]
gi|323972411|gb|EGB67618.1| OmpA family protein [Escherichia coli TA007]
Length = 261
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 50/149 (33%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ + + + L + + + D F+ S I P
Sbjct: 75 SATELGELATSITTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKT 134
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + + L RA + G+ ++
Sbjct: 135 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYDNWNLSGDRALSARRVLEEAGMPEDKVM 194
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 195 QVSAMADQMLLDSKNPQS-AGNRRIEIMV 222
>gi|148254925|ref|YP_001239510.1| putative chemotaxis protein MotB [Bradyrhizobium sp. BTAi1]
gi|146407098|gb|ABQ35604.1| putative chemotaxis protein MotB [Bradyrhizobium sp. BTAi1]
Length = 276
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 46/152 (30%), Gaps = 10/152 (6%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
A+ S+ +++ + ++ + + D F S +
Sbjct: 115 FALASASLRQALQDMPEMTEISKHIMFEETKQGLNLEIVDQDGRSMFADGSKVPYDRTRR 174
Query: 68 VLSNLGSWLEKHDCDFLIEGHADELG----SRNSSIALGLRRAYAVFNYFVARGISASRM 123
++ L + L+ I GH S + L RA AV G+ S +
Sbjct: 175 LIEKLAAPLKATPLRVQITGHTAAGFVPARSDYGAFDLSADRANAVRQILEREGLPPSHI 234
Query: 124 KVT-SYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
P D+ + A NRR + L
Sbjct: 235 FAVSGKADTQPLFP--DDPSLAANRRVTITLM 264
>gi|226941125|ref|YP_002796199.1| flagellar motor protein MotB [Laribacter hongkongensis HLHK9]
gi|226716052|gb|ACO75190.1| MotB [Laribacter hongkongensis HLHK9]
Length = 293
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 41/128 (32%), Gaps = 8/128 (6%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS-- 94
+ + FD+ S ++ P +L LG + GH D
Sbjct: 142 TPEGLKVQIVDEKNRPMFDSGSANLLPHTKDILHELGKMFNDVPNRLSVSGHTDATPYAG 201
Query: 95 ---RNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAI 150
S+ L RA A +A G+ ++ +V G P + NRR
Sbjct: 202 GERGYSNWDLSADRANAARRELLAGGMQDQKILRVVGLGSANPLDKQN--AVNPINRRIA 259
Query: 151 VFLKGCRA 158
+ + ++
Sbjct: 260 IVVLNKQS 267
>gi|74310872|ref|YP_309292.1| hypothetical protein SSON_0272 [Shigella sonnei Ss046]
gi|293418347|ref|ZP_06660782.1| chemotaxis protein MotB [Escherichia coli B088]
gi|73854349|gb|AAZ87056.1| putative motility protein [Shigella sonnei Ss046]
gi|291324875|gb|EFE64290.1| chemotaxis protein MotB [Escherichia coli B088]
Length = 261
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 51/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ + + + L + + + D F+ S I P
Sbjct: 75 SATELGELATSITTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKT 134
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 135 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 194
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 195 QVSAMADQMLLDSKNPQS-AGNRRIEIMV 222
>gi|157157459|ref|YP_001461420.1| hypothetical protein EcE24377A_0264 [Escherichia coli E24377A]
gi|157159714|ref|YP_001457032.1| hypothetical protein EcHS_A0258 [Escherichia coli HS]
gi|191165724|ref|ZP_03027563.1| putative chemotaxis protein [Escherichia coli B7A]
gi|157065394|gb|ABV04649.1| putative chemotaxis protein [Escherichia coli HS]
gi|157079489|gb|ABV19197.1| putative chemotaxis protein [Escherichia coli E24377A]
gi|190904231|gb|EDV63941.1| putative chemotaxis protein [Escherichia coli B7A]
gi|320176694|gb|EFW51731.1| Flagellar motor rotation protein MotB [Shigella dysenteriae CDC
74-1112]
gi|323169560|gb|EFZ55232.1| lateral flagellar motor protein B [Shigella sonnei 53G]
Length = 256
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 51/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ + + + L + + + D F+ S I P
Sbjct: 70 SATELGELATSITTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKT 129
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 130 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 189
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 190 QVSAMADQMLLDSKNPQS-AGNRRIEIMV 217
>gi|304392317|ref|ZP_07374258.1| OmpA/MotB [Ahrensia sp. R2A130]
gi|303295421|gb|EFL89780.1| OmpA/MotB [Ahrensia sp. R2A130]
Length = 567
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 32/108 (29%), Positives = 46/108 (42%), Gaps = 8/108 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLG-----SWLEKHDCDFLIEGHADELGSRNSSIALGLR 104
+++ F+T S S+ P+ + L LG FL+EGH D +GS S++ L R
Sbjct: 450 NAINFNTGSASVTPSQVDKLEELGIALERHIKANPRAVFLMEGHTDAVGSDVSNLTLSDR 509
Query: 105 RAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA V + + YG+ V E A A NRR V
Sbjct: 510 RAETVARILIENFAVPAENIVTQGYGESDLKV--RTEAANADNRRVTV 555
>gi|260429564|ref|ZP_05783541.1| OmpA/MotB [Citreicella sp. SE45]
gi|260420187|gb|EEX13440.1| OmpA/MotB [Citreicella sp. SE45]
Length = 517
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 13/68 (19%), Positives = 22/68 (32%)
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+G D + + AV A + M ++G+ MP
Sbjct: 449 DGQGDADANLEIARKRADAVRTAVEQAAEAADLDRIGMATEAFGEAMPMACDDTVWGRQV 508
Query: 146 NRRAIVFL 153
NRR V++
Sbjct: 509 NRRVEVWV 516
>gi|206890444|ref|YP_002248653.1| chemotaxis protein MotB [Thermodesulfovibrio yellowstonii DSM
11347]
gi|206742382|gb|ACI21439.1| chemotaxis protein MotB [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 252
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 42/123 (34%), Gaps = 6/123 (4%)
Query: 36 NESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR 95
+ F SS ++L + ++ +EGH D + R
Sbjct: 125 TVEGGVRIQIVDLEGEPMFPLSSAEPTEKAREILKVVAENIKDEPARVAVEGHTDAVPFR 184
Query: 96 ---NSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
++ L RA + G++ ++ +V Y +P + +D +NRR +
Sbjct: 185 GGKTTNWELSTARASSARREIERYGVAPEKIARVVGYADTLPLIKDDPKD--PRNRRISI 242
Query: 152 FLK 154
L
Sbjct: 243 ILM 245
>gi|194438259|ref|ZP_03070351.1| putative chemotaxis protein [Escherichia coli 101-1]
gi|297521341|ref|ZP_06939727.1| hypothetical protein EcolOP_27134 [Escherichia coli OP50]
gi|194422923|gb|EDX38918.1| putative chemotaxis protein [Escherichia coli 101-1]
Length = 256
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 50/149 (33%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ + + + L + + + D F+ S I P
Sbjct: 70 SATELGELATSITTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKT 129
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + + L RA + G+ ++
Sbjct: 130 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYDNWNLSGDRALSARRVLEEAGMPEDKVM 189
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 190 QVSAMADQMLLDSKNPQS-AGNRRIEIMV 217
>gi|71280941|ref|YP_267837.1| flagellar motor protein MotB [Colwellia psychrerythraea 34H]
gi|71146681|gb|AAZ27154.1| sodium-driven polar flagellar protein [Colwellia psychrerythraea
34H]
Length = 314
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 46/115 (40%), Gaps = 5/115 (4%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
D + SL +Q + ++ F + S ++P V+ +G L + +I GH D
Sbjct: 171 QDGAIELESLGQQVIIRIRENGSFPSGSAFLQPKFWPVIREIGELLNTVPGEIMISGHTD 230
Query: 91 ELGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDE 140
G +S+ L +RA A+ + + A+R+ + P V +
Sbjct: 231 NRGVDSELFSSNWDLSSKRAVAIAHQLIKVPDFDATRLVAAGHADTRPLVPNTNA 285
>gi|61655673|gb|AAX49323.1| PlpD [Mannheimia haemolytica]
gi|61655675|gb|AAX49324.1| PlpD [Mannheimia haemolytica]
Length = 217
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 41/100 (41%), Gaps = 2/100 (2%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRR 105
++ FD ++ +V+ N+ L+ + G+ D LGS ++ L RR
Sbjct: 114 ALTGDFLFDFDKATLTTKGKEVVDNVAQQLKASKAQQVKVAGYTDRLGSAAYNLDLSQRR 173
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ V V +G++A +++ YGK E A
Sbjct: 174 SNTVKARLVQQGVTA-QIEAVGYGKANQVKACDGETGQAL 212
>gi|315638943|ref|ZP_07894114.1| flagellar motor protein MotB [Campylobacter upsaliensis JV21]
gi|315480972|gb|EFU71605.1| flagellar motor protein MotB [Campylobacter upsaliensis JV21]
Length = 244
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 48/119 (40%), Gaps = 5/119 (4%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVL---SNLGSWLEKHDCDFLIEGHADELGSR 95
+ Q + ++ V F +S I AD+Q S I G D S
Sbjct: 108 QSENQIALNLPSRVEFAKNSAEIVSADVQDYLKRMAQLSLSLPPQAKIEIRGFTDNSDSA 167
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
S LG RA AV NYF+ G+S ++ + SYG P + H A N R ++ K
Sbjct: 168 LRSFELGYERAKAVMNYFIDGGVSVGKLSIKSYGFNEPLL-NHAPSDLANN-RVEIYFK 224
>gi|251733491|emb|CAR82495.1| pal [Sinorhizobium medicae]
gi|251733493|emb|CAR82496.1| pal [Sinorhizobium medicae]
gi|251733495|emb|CAR82497.1| pal [Sinorhizobium medicae]
Length = 87
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 56 TSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
T S SIR L W + + IEGHADE G+R ++ALG RRA A +Y V
Sbjct: 1 TDSTSIRADAQTTLDRQAQWLAKYPNYAVTIEGHADERGTREYNLALGARRAAATRDYLV 60
Query: 115 ARGISASRMKVTSYGKEMPSVYGHD 139
+RG+ +RM+ SYGKE P D
Sbjct: 61 SRGVPGNRMRTISYGKEKPVAVCDD 85
>gi|159045040|ref|YP_001533834.1| hypothetical protein Dshi_2499 [Dinoroseobacter shibae DFL 12]
gi|157912800|gb|ABV94233.1| hypothetical protein Dshi_2499 [Dinoroseobacter shibae DFL 12]
Length = 240
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLE--KHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
+V FD S S+ + + LE ++ G+ D +GS ++ALG RRA
Sbjct: 40 TVLFDFDSASLDAEAATQVRAIAEALEATPSYKPTIVVGYTDAVGSTGYNLALGQRRAQT 99
Query: 109 VFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRA 149
V + A+G+ SR+ + S G+ V + NRR
Sbjct: 100 VADALTAQGVPVSRIGSIASRGESDLVVAVATAERR--NRRV 139
>gi|224539344|ref|ZP_03679883.1| hypothetical protein BACCELL_04249 [Bacteroides cellulosilyticus
DSM 14838]
gi|224519039|gb|EEF88144.1| hypothetical protein BACCELL_04249 [Bacteroides cellulosilyticus
DSM 14838]
Length = 224
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 54/134 (40%), Gaps = 7/134 (5%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ + + + V + + L + + F +S ++ L L L++
Sbjct: 80 AAEAAKIEGAQVEKVTDTNGLAA-VKVTFESGILFGFNSSTLSNTSKSSLRELAQILKED 138
Query: 80 DCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYG 137
I GH D++G+ +++ + RAY V NY G+S S+ K V G
Sbjct: 139 PTTDIAIVGHTDKVGTYEANMKVSKDRAYTVENYLQDCGVSPSQFKKVEGVGYNQY---- 194
Query: 138 HDEDAYAKNRRAIV 151
D + ++NRR +
Sbjct: 195 DDSMSASQNRRVDI 208
>gi|325336487|gb|ADZ12761.1| OmpA3 [Riemerella anatipestifer RA-GD]
Length = 473
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 54/143 (37%), Gaps = 13/143 (9%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVF----FDTSSYSIRPADIQVLSNLGSWLEKHD 80
D ++ P V N +E + F F +S IRP L N + ++
Sbjct: 331 DKCVTVPGPVSNNGCPEESQQVKEVNRDFEGIEFALNSDVIRPQSFGKLDNAANIIKGMG 390
Query: 81 CD---FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
++ G D GS + ++ L RRA +V Y V +G+SAS +K GK
Sbjct: 391 LSKQYLVVVGATDTRGSASYNLNLSKRRANSVVKYLVNKGVSASVLKAEGRGKNDLKYPE 450
Query: 138 HDEDAY------AKNRRAIVFLK 154
+ NRR +K
Sbjct: 451 CNPATKCPEWKNEANRRVYFEVK 473
>gi|332291797|ref|YP_004430406.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332169883|gb|AEE19138.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 292
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 45/110 (40%), Gaps = 4/110 (3%)
Query: 53 FFDTS-SYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FFDT S I+ + + S + D I G+ D+ G+ + L RA + +
Sbjct: 29 FFDTDKSALIKTELASLNRFIASLPKDKIEDISIYGYCDDRGTDAYNKRLSQDRANTIKD 88
Query: 112 YFVARGISASRMK-VTSYGKEMP--SVYGHDEDAYAKNRRAIVFLKGCRA 158
F+ +G++ + +K G+ + E NR+ + + +A
Sbjct: 89 IFMLQGVADTIIKNSDGKGELLLTRLDDAGSEIQRKLNRKVEIIVSLKQA 138
>gi|270159049|ref|ZP_06187705.1| IcmN (DotK) [Legionella longbeachae D-4968]
gi|269987388|gb|EEZ93643.1| IcmN (DotK) [Legionella longbeachae D-4968]
Length = 183
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 17/143 (11%), Positives = 52/143 (36%), Gaps = 1/143 (0%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL 72
++ + + + ++ + + S+ S F++ + ++ +L+ +
Sbjct: 37 CKVLGACDATIMKLAKNLNRKGVKVITIGQDYMISIPASYLFESETPHLKWKSYALLNEI 96
Query: 73 GSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
+ + I ++ + S AL L R+ V Y ++G+ + + G +
Sbjct: 97 AVFLKQFRKIAINIASYSSKYISPQREHALTLARSRVVSEYLWSQGVDSRFIFTQGLGSD 156
Query: 132 MPSVYGHDEDAYAKNRRAIVFLK 154
P + + + N R + +
Sbjct: 157 KPIIAYTEGGDSSVNARVEITFR 179
>gi|298346001|ref|YP_003718688.1| flagellar motor protein B [Mobiluncus curtisii ATCC 43063]
gi|304390241|ref|ZP_07372195.1| OmpA/MotB domain protein [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|315657506|ref|ZP_07910388.1| OmpA/MotB domain protein [Mobiluncus curtisii subsp. holmesii ATCC
35242]
gi|298236062|gb|ADI67194.1| flagellar motor protein B [Mobiluncus curtisii ATCC 43063]
gi|304326723|gb|EFL93967.1| OmpA/MotB domain protein [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|315491978|gb|EFU81587.1| OmpA/MotB domain protein [Mobiluncus curtisii subsp. holmesii ATCC
35242]
Length = 307
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 54/139 (38%), Gaps = 5/139 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSS-VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI 85
K + + L + V + +F T +I+P +VL + L + I
Sbjct: 124 KDAGKEGSLAMRITDKGLVLGMVANDTYFKTGDATIQPTAREVLKAISPTLMSIEEGIAI 183
Query: 86 EGHADELGSRNSSIALGLRRAYA----VFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
EG+AD ++ A A V G+ ++++ SYG + + +D
Sbjct: 184 EGYADPQPISSAKFPSNYHLASARAIEVLIALKDDGVPGTKLRSISYGADHQTEATPGQD 243
Query: 142 AYAKNRRAIVFLKGCRANT 160
A+A NRR + + ++
Sbjct: 244 AWAFNRRVDIVIMSTAKDS 262
>gi|82775833|ref|YP_402180.1| hypothetical protein SDY_0484 [Shigella dysenteriae Sd197]
gi|81239981|gb|ABB60691.1| putative motility protein [Shigella dysenteriae Sd197]
Length = 259
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 73 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKT 132
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 133 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 192
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 193 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 220
>gi|166714360|gb|ABY87946.1| outer membrane protein [Acinetobacter sp. wpo2421]
Length = 319
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 5/119 (4%)
Query: 20 GIDNLDTKISSPDTVLNESS-LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LE 77
++ P V + L E + + VFFDT+ I+P ++ + E
Sbjct: 203 AAPVVEVAPVEPTPVAPQPQELTEDLNMEL--RVFFDTNKSDIKPQYKSEIAKVAEKLSE 260
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSV 135
+ IEGH D G R + L L RA +V + V + ASR+ + + P
Sbjct: 261 YPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIA 319
>gi|260890422|ref|ZP_05901685.1| fibronectin-binding protein [Leptotrichia hofstadii F0254]
gi|260860042|gb|EEX74542.1| fibronectin-binding protein [Leptotrichia hofstadii F0254]
Length = 149
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 26/163 (15%), Positives = 52/163 (31%), Gaps = 20/163 (12%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ + IF++++ N + P +V + + F ++ +V ++ + +
Sbjct: 1 MKKAIIFLVMAVGI--------NAMAHLGGPCSVEEKKCVIRGF--NIDGNVLNESEAST 50
Query: 61 IRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA 120
IR + + GH D GS+ ++ L RA +
Sbjct: 51 IREIVNDL------NKYGKSGTIDVIGHTDSTGSQKHNLKLSETRAKNFAR-LMREFGLD 103
Query: 121 SRMK---VTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
R + G P + NRR + L T
Sbjct: 104 KRFSFGKIKGGGANSPVDTDDRVEGRYNNRRVEILLNNVEFET 146
>gi|92117049|ref|YP_576778.1| OmpA/MotB [Nitrobacter hamburgensis X14]
gi|91799943|gb|ABE62318.1| OmpA/MotB [Nitrobacter hamburgensis X14]
Length = 276
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 45/152 (29%), Gaps = 10/152 (6%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
A+ S+ +++ + +E + + D F S
Sbjct: 115 FALASASLRQALQDMPELTELSKHIMFEETKEGLNLEIVDQDGRSMFADGSREPYERTRM 174
Query: 68 VLSNLGSWLEKHDCDFLIEGHADELG----SRNSSIALGLRRAYAVFNYFVARGISASRM 123
++ L + L+ I GH S L RA AV G+ S +
Sbjct: 175 LIRKLAAPLKATPLRISITGHTASNFIPTRSDYDGFDLSADRANAVRQILEREGLPPSHI 234
Query: 124 KVT-SYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
MP D+ + A NRR + L
Sbjct: 235 FAVAGKSDSMPLFP--DDPSLAANRRVTITLM 264
>gi|56694983|ref|YP_165329.1| OmpA domain-containing protein [Ruegeria pomeroyi DSS-3]
gi|56676720|gb|AAV93386.1| OmpA domain protein [Ruegeria pomeroyi DSS-3]
Length = 518
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 41/108 (37%), Gaps = 7/108 (6%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLE---KHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
F+T S +S L LE L G +D G+ + + L+RA AV
Sbjct: 411 FETGSSRPDAQSRTNISQLAQELESGAYDARQLLFVGFSDGDGAAEGNTRIALKRAEAVR 470
Query: 111 NYF----VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ + + V ++G+ +P + NRR V++K
Sbjct: 471 DAVLQTAETLDPARVEVSVDAFGEALPMACDDSDWGRQVNRRVEVWVK 518
>gi|256020246|ref|ZP_05434111.1| hypothetical protein ShiD9_15115 [Shigella sp. D9]
gi|332281408|ref|ZP_08393821.1| flagellar motor region [Shigella sp. D9]
gi|332103760|gb|EGJ07106.1| flagellar motor region [Shigella sp. D9]
Length = 307
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 51/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ + + + L + + + D F+ S I P
Sbjct: 121 SATELGELATSITTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKM 180
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 181 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 240
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 241 QVSAMADQMLLDSKNPQS-AGNRRIEIMV 268
>gi|251733441|emb|CAR82470.1| pal [Mesorhizobium loti]
Length = 87
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 37/85 (43%), Positives = 49/85 (57%), Gaps = 1/85 (1%)
Query: 56 TSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
T S SIR L+ W + ++EGHADE G+R ++ALG RRA A ++ V
Sbjct: 1 TDSTSIRADAQTTLARQAQWLNQYKQYAIVVEGHADERGTREYNLALGARRAAATRDFLV 60
Query: 115 ARGISASRMKVTSYGKEMPSVYGHD 139
A+G+SASR+K SYGKE P D
Sbjct: 61 AKGVSASRLKTISYGKERPVAVCDD 85
>gi|126725476|ref|ZP_01741318.1| OmpA family domain protein [Rhodobacterales bacterium HTCC2150]
gi|126704680|gb|EBA03771.1| OmpA family domain protein [Rhodobacterales bacterium HTCC2150]
Length = 216
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 10/108 (9%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGLRRAY 107
+ F S I Q L L L+ + GH+D GS ++ +G+ RA
Sbjct: 108 RIHFPQGSDIIVEEFGQHLDMLAGILQYSSLSQTCLKLVGHSDTSGSAKANFNMGMLRAK 167
Query: 108 AVFNYFVARGIS-ASRMKVTSYGKEMPS--VYGHDEDAYAKNRRAIVF 152
AV Y R ++R++VTS G++ P + D KNRR ++
Sbjct: 168 AVKGYLTNRTAFASTRIEVTSEGEDAPLQGISTTDP----KNRRVEIW 211
>gi|313206072|ref|YP_004045249.1| ompa/motb domain protein [Riemerella anatipestifer DSM 15868]
gi|312445388|gb|ADQ81743.1| OmpA/MotB domain protein [Riemerella anatipestifer DSM 15868]
Length = 473
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 54/143 (37%), Gaps = 13/143 (9%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVF----FDTSSYSIRPADIQVLSNLGSWLEKHD 80
D ++ P V N +E + F F +S IRP L N + ++
Sbjct: 331 DKCVTVPGPVSNNGCPEESQQVKEVNRDFEGIEFALNSDVIRPQSFGKLDNAANIIKGMG 390
Query: 81 CD---FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
++ G D GS + ++ L RRA +V Y V +G+SAS +K GK
Sbjct: 391 LSKQYLVVVGATDTRGSASYNLNLSKRRANSVVKYLVNKGVSASVLKAEGRGKNDLKYPE 450
Query: 138 HDEDAY------AKNRRAIVFLK 154
+ NRR +K
Sbjct: 451 CNPATKCPEWKNEANRRVYFEVK 473
>gi|260842477|ref|YP_003220255.1| flagellar system protein MbhA [Escherichia coli O103:H2 str. 12009]
gi|257757624|dbj|BAI29121.1| flagellar system protein MbhA [Escherichia coli O103:H2 str. 12009]
Length = 261
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 51/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ + + + L + + + D F+ S I P
Sbjct: 75 SATELGELATSITTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKT 134
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 135 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 194
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 195 QVSAMADQMLLDSKNPKS-AGNRRIEIMV 222
>gi|254720692|ref|ZP_05182503.1| hypothetical protein Bru83_14530 [Brucella sp. 83/13]
gi|265985741|ref|ZP_06098476.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306839356|ref|ZP_07472172.1| lipoprotein [Brucella sp. NF 2653]
gi|264664333|gb|EEZ34594.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306405604|gb|EFM61867.1| lipoprotein [Brucella sp. NF 2653]
Length = 172
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 29/175 (16%), Positives = 53/175 (30%), Gaps = 30/175 (17%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSV-------------- 48
T+ ++ A+++ + S T +N + QE+ V
Sbjct: 1 MRTLVMVACAVSLAACSSPPKPPTVSGRHRIPINSPAAQEELRLQVFPQEPTAQATMWPA 60
Query: 49 -----GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGL 103
SV+F RP Q+ + G D +
Sbjct: 61 RPPKQTVSVYFPQDVTVFRPTSAQINQLHTLLW-PVPKHINVRGLTDNNCPPPGDTQVAR 119
Query: 104 RRAYAVFNYFVARGISASRMK-----VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA A++N+ + +G+ AS++ V Y P NRR + +
Sbjct: 120 TRALAIYNWLINQGVPASKITISYAPVKDYASNAPLSP-----GRVLNRRVDIEI 169
>gi|331661626|ref|ZP_08362549.1| putative motility protein [Escherichia coli TA143]
gi|331060048|gb|EGI32012.1| putative motility protein [Escherichia coli TA143]
Length = 261
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 75 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKT 134
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 135 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 194
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 195 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 222
>gi|222084880|ref|YP_002543409.1| chemotaxis motility protein [Agrobacterium radiobacter K84]
gi|221722328|gb|ACM25484.1| chemotaxis motility protein [Agrobacterium radiobacter K84]
Length = 452
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 53/148 (35%), Gaps = 13/148 (8%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
+ ++G +++S + L + + + F+ S R + + +G
Sbjct: 286 ISGVAGQLAEGVQVASAEGGLLVTISDQ------SNDPMFNIGSAVPRREMVLAMGKIGK 339
Query: 75 WLEKHDCDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYG 129
L LI GH D N + L L RA + + + G+ R++ V+ +
Sbjct: 340 ILANRKGVILIRGHTDGRPYMVGGHNDNWRLSLDRAQSAYYMLTSTGLDEKRIEQVSGFA 399
Query: 130 KEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
+ A NRR + ++ +
Sbjct: 400 DRRLKLPND-PFNDA-NRRIEILIEDAK 425
>gi|218552836|ref|YP_002385749.1| hypothetical protein ECIAI1_0271 [Escherichia coli IAI1]
gi|218693715|ref|YP_002401382.1| hypothetical protein EC55989_0255 [Escherichia coli 55989]
gi|218350447|emb|CAU96134.1| flagellar system protein [Escherichia coli 55989]
gi|218359604|emb|CAQ97145.1| flagellar system protein [Escherichia coli IAI1]
Length = 296
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 53/149 (35%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P +
Sbjct: 110 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKR 169
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 170 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 229
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 230 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 257
>gi|325578440|ref|ZP_08148575.1| lipoprotein PlpD [Haemophilus parainfluenzae ATCC 33392]
gi|325160176|gb|EGC72305.1| lipoprotein PlpD [Haemophilus parainfluenzae ATCC 33392]
Length = 285
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 46/119 (38%), Gaps = 10/119 (8%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRR 105
++ FD ++ +V+ ++ + L++ + G+ D LGS ++ L RR
Sbjct: 145 ALSGDFLFDFDKDTLTARGKEVVDSVAAQLKETGAKDVKVAGYTDRLGSDAYNLDLSQRR 204
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGH--------DEDAYAKNRRAIVFLKGC 156
A V + G+++ + YGK ++D NRR + G
Sbjct: 205 ANRVKARLLQDGVTSE-ITAIGYGKNPQVKACDGYKHGSKAEKDCLRPNRRVEINASGS 262
>gi|324115583|gb|EGC09522.1| OmpA family protein [Escherichia coli E1167]
Length = 261
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 75 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKT 134
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 135 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 194
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 195 QVSAMADQMLLDSKNPQS-AGNRRIEIMV 222
>gi|239950061|gb|ACS36762.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 282
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 41/95 (43%), Gaps = 3/95 (3%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + G+ D +G +++ L
Sbjct: 181 AFSSDVLFDFGKANLKPAAAQTLDAAHAEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 240
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+RA V NY V++G++ + + YG+ P
Sbjct: 241 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNT 275
>gi|15799935|ref|NP_285947.1| hypothetical protein Z0291 [Escherichia coli O157:H7 EDL933]
gi|15829511|ref|NP_308284.1| hypothetical protein ECs0256 [Escherichia coli O157:H7 str. Sakai]
gi|291281074|ref|YP_003497892.1| putative motility protein [Escherichia coli O55:H7 str. CB9615]
gi|293413506|ref|ZP_06656155.1| hypothetical protein ECDG_00047 [Escherichia coli B185]
gi|331651164|ref|ZP_08352189.1| putative motility protein [Escherichia coli M718]
gi|12513001|gb|AAG54555.1|AE005201_8 putative motility protein [Escherichia coli O157:H7 str. EDL933]
gi|13359714|dbj|BAB33680.1| putative motility protein [Escherichia coli O157:H7 str. Sakai]
gi|209745376|gb|ACI70995.1| putative motility protein [Escherichia coli]
gi|209745378|gb|ACI70996.1| putative motility protein [Escherichia coli]
gi|209745380|gb|ACI70997.1| putative motility protein [Escherichia coli]
gi|209745382|gb|ACI70998.1| putative motility protein [Escherichia coli]
gi|290760946|gb|ADD54907.1| Putative motility protein [Escherichia coli O55:H7 str. CB9615]
gi|291433564|gb|EFF06537.1| hypothetical protein ECDG_00047 [Escherichia coli B185]
gi|323938776|gb|EGB35022.1| OmpA family protein [Escherichia coli E1520]
gi|331050905|gb|EGI22957.1| putative motility protein [Escherichia coli M718]
Length = 261
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 75 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKT 134
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 135 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 194
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 195 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 222
>gi|16751949|ref|NP_444533.1| TraP protein [Plasmid pIPO2T]
gi|16610017|emb|CAC82763.1| TraP protein [Plasmid pIPO2T]
Length = 186
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 21/147 (14%), Positives = 44/147 (29%), Gaps = 6/147 (4%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
+++ ++ S + S SV F + + +
Sbjct: 41 VIALRAQLAQSEEKLRVEQARPVIAPTVLQPAPPPPVRSRTFSVHFPYNDTNFHLSADDR 100
Query: 69 LSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV--T 126
+ L L + + G D + + L RA A + + +G+S + + V
Sbjct: 101 VQLL--PLLANARRIEVRGRTDGQRPSTADEKIALNRALAAQRFLIGQGVSPAIISVNYV 158
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S G + NRR + +
Sbjct: 159 SAGDY--VADNFSAVGRSLNRRVDIEV 183
>gi|294012218|ref|YP_003545678.1| OmpA-family protein [Sphingobium japonicum UT26S]
gi|292675548|dbj|BAI97066.1| OmpA-family protein [Sphingobium japonicum UT26S]
Length = 236
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 41/102 (40%), Gaps = 1/102 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+FFD + + P +S L + F + G+ D GS + L LRRA V
Sbjct: 131 IFFDWNMDTPLPEGAGTISTLTQTAAQCGWTRFGVTGYTDTSGSNRYNDGLSLRRARNVA 190
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ G+SA + VT G+ + D NRR +
Sbjct: 191 SLMSQGGVSADAITVTGLGETQLKIETADGVREPMNRRVEIT 232
>gi|90424373|ref|YP_532743.1| OmpA/MotB [Rhodopseudomonas palustris BisB18]
gi|90106387|gb|ABD88424.1| OmpA/MotB [Rhodopseudomonas palustris BisB18]
Length = 218
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 17/113 (15%), Positives = 38/113 (33%), Gaps = 3/113 (2%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIA 100
Q+ + + + F + + L +G +K + + + + +
Sbjct: 103 QDARILEMEEPILFSRADARLSSTSANRLIAVGKIFQKFNQR---QVDIIGHSASDEADE 159
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L RA V + +++ S G P E +NRR +F+
Sbjct: 160 VALARAKVVTSRLKEMTGGRLPLRMRSKGSSEPVGDNRTETGRDRNRRVTIFV 212
>gi|300817251|ref|ZP_07097469.1| OmpA family protein [Escherichia coli MS 107-1]
gi|307313501|ref|ZP_07593122.1| OmpA/MotB domain protein [Escherichia coli W]
gi|300530227|gb|EFK51289.1| OmpA family protein [Escherichia coli MS 107-1]
gi|306906669|gb|EFN37180.1| OmpA/MotB domain protein [Escherichia coli W]
gi|323181565|gb|EFZ66985.1| lateral flagellar motor protein B [Escherichia coli 1357]
gi|323379881|gb|ADX52149.1| OmpA/MotB domain protein [Escherichia coli KO11]
Length = 307
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 51/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ + + + L + + + D F+ S I P
Sbjct: 121 SATELGELATSITTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKT 180
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 181 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 240
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 241 QVSAMADQMLLDSKNPQS-AGNRRIEIMV 268
>gi|168750213|ref|ZP_02775235.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4113]
gi|168763471|ref|ZP_02788478.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4501]
gi|168770028|ref|ZP_02795035.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4486]
gi|168782991|ref|ZP_02807998.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4076]
gi|168789703|ref|ZP_02814710.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC869]
gi|168800332|ref|ZP_02825339.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC508]
gi|187776213|ref|ZP_02801137.2| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4196]
gi|189402400|ref|ZP_02782265.2| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4401]
gi|194432761|ref|ZP_03065046.1| putative chemotaxis protein [Shigella dysenteriae 1012]
gi|195938633|ref|ZP_03084015.1| hypothetical protein EscherichcoliO157_19762 [Escherichia coli
O157:H7 str. EC4024]
gi|208807047|ref|ZP_03249384.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4206]
gi|208811824|ref|ZP_03253153.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4045]
gi|208818543|ref|ZP_03258863.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4042]
gi|209397836|ref|YP_002268857.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4115]
gi|217325834|ref|ZP_03441918.1| putative chemotaxis protein [Escherichia coli O157:H7 str. TW14588]
gi|254791390|ref|YP_003076227.1| hypothetical protein ECSP_0264 [Escherichia coli O157:H7 str.
TW14359]
gi|261223715|ref|ZP_05937996.1| hypothetical protein EscherichiacoliO157_03796 [Escherichia coli
O157:H7 str. FRIK2000]
gi|261255876|ref|ZP_05948409.1| hypothetical protein EscherichiacoliO157EcO_08593 [Escherichia coli
O157:H7 str. FRIK966]
gi|187768449|gb|EDU32293.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4196]
gi|188015577|gb|EDU53699.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4113]
gi|188999606|gb|EDU68592.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4076]
gi|189355696|gb|EDU74115.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4401]
gi|189361036|gb|EDU79455.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4486]
gi|189366384|gb|EDU84800.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4501]
gi|189370768|gb|EDU89184.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC869]
gi|189377329|gb|EDU95745.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC508]
gi|194419023|gb|EDX35107.1| putative chemotaxis protein [Shigella dysenteriae 1012]
gi|208726848|gb|EDZ76449.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4206]
gi|208733101|gb|EDZ81788.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4045]
gi|208738666|gb|EDZ86348.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4042]
gi|209159236|gb|ACI36669.1| putative chemotaxis protein [Escherichia coli O157:H7 str. EC4115]
gi|217322055|gb|EEC30479.1| putative chemotaxis protein [Escherichia coli O157:H7 str. TW14588]
gi|254590790|gb|ACT70151.1| chemotaxis motB protein [Escherichia coli O157:H7 str. TW14359]
gi|320190216|gb|EFW64866.1| Flagellar motor rotation protein MotB [Escherichia coli O157:H7
str. EC1212]
gi|320638165|gb|EFX07914.1| hypothetical protein ECO5101_07089 [Escherichia coli O157:H7 str.
G5101]
gi|320654674|gb|EFX22675.1| hypothetical protein ECO7815_10457 [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320660242|gb|EFX27752.1| hypothetical protein ECO5905_08983 [Escherichia coli O55:H7 str.
USDA 5905]
gi|320665008|gb|EFX32118.1| hypothetical protein ECOSU61_13992 [Escherichia coli O157:H7 str.
LSU-61]
gi|326338763|gb|EGD62582.1| Flagellar motor rotation protein MotB [Escherichia coli O157:H7
str. 1044]
gi|326342450|gb|EGD66230.1| Flagellar motor rotation protein MotB [Escherichia coli O157:H7
str. 1125]
gi|332097320|gb|EGJ02301.1| lateral flagellar motor protein B [Shigella dysenteriae 155-74]
Length = 256
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 70 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKT 129
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 130 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 189
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 190 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 217
>gi|187921515|ref|YP_001890547.1| OmpA/MotB domain-containing protein [Burkholderia phytofirmans
PsJN]
gi|187719953|gb|ACD21176.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
Length = 362
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 50/139 (35%), Gaps = 12/139 (8%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDT---SSYSIRPADIQVLSNLGSWLEKHDC- 81
+ + ++ ++ F +I PA + ++ + L+K
Sbjct: 220 SAPVPVSAPVTVAAANSPRKITLKADSLFSFNGGDDAAILPAGKRQMNEVAVRLKKLPSV 279
Query: 82 -DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ I G+AD LG ++ + L ++RA V Y + G+ + M G P V
Sbjct: 280 HELKITGYADRLGDKSYNQGLSMQRARTVERYLQSLGV-SLPMTAQGRGSANPLVDCRQS 338
Query: 141 DAY------AKNRRAIVFL 153
A NRR + L
Sbjct: 339 KGDVLTRCLAPNRRVEIEL 357
>gi|193063256|ref|ZP_03044347.1| putative chemotaxis protein [Escherichia coli E22]
gi|192931164|gb|EDV83767.1| putative chemotaxis protein [Escherichia coli E22]
gi|323160305|gb|EFZ46258.1| lateral flagellar motor protein B [Escherichia coli E128010]
Length = 256
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 51/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ + + + L + + + D F+ S I P
Sbjct: 70 SATELGELATSITTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKT 129
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 130 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 189
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 190 QVSAMADQMLLDSKNPKS-AGNRRIEIMV 217
>gi|126665979|ref|ZP_01736959.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Marinobacter sp. ELB17]
gi|126629301|gb|EAZ99918.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Marinobacter sp. ELB17]
Length = 305
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 7/114 (6%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHADELGSRNS 97
L G + F ++S ++ AD + L + ++ + L++GH D GSR
Sbjct: 174 LPANLDQLQGSQILFSSASVALSDADRRSLDKVVVYVLADSTVTKVLVDGHTDRRGSRID 233
Query: 98 SIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ L RA AV Y ++G+ SR+ V ++G + + G+ A+NRR ++
Sbjct: 234 NRKLAQDRADAVAGYLKSQGVEESRITVRAHG-DQFAASGNP----AQNRRVVI 282
>gi|224532865|ref|ZP_03673480.1| outer membrane protein [Borrelia burgdorferi WI91-23]
gi|224512254|gb|EEF82640.1| outer membrane protein [Borrelia burgdorferi WI91-23]
Length = 381
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 45/111 (40%), Gaps = 3/111 (2%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGL 103
++ + F +S+ I + + + + + + LIEGH ++ G L
Sbjct: 269 GINLSFDIEFYPNSFQILQKEYKKIDLIAKLLEKFKKNNILIEGHTEQFGLEEEMHELSE 328
Query: 104 RRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+RA A+ NY + + ++ +G + P AKNRR + +
Sbjct: 329 KRARAIGNYLIKMKVKDKDQILFKGWGSQKPKHPKSSPL-KAKNRRVEITI 378
>gi|75677209|ref|YP_319630.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255]
gi|74422079|gb|ABA06278.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255]
Length = 213
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 31/109 (28%), Positives = 43/109 (39%), Gaps = 12/109 (11%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGS---WLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
+ FD S ++ P L +LG E ++ GH D GS + L RRA
Sbjct: 98 DINFDFDSAAVTPRTEPQLHSLGKALTSDELAGSVIMLGGHTDGKGSDAYNQNLSERRAE 157
Query: 108 AVFNYF-VARGISASRMKVTSYGKE---MPSVYGHDEDAYAKNRRAIVF 152
AV + I A+ + YGKE P+ A+NRR V
Sbjct: 158 AVKRFLVETYKIPAANLVAAGYGKEGYKNPADPFA-----AENRRVEVV 201
>gi|183221921|ref|YP_001839917.1| hypothetical protein LEPBI_I2560 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|167780343|gb|ABZ98641.1| Hypothetical protein LEPBI_I2560 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 125
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 43/104 (41%), Gaps = 3/104 (2%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
+++F S I D+ L + + + + I+ HA E + +I + +R+ V
Sbjct: 20 TIYFAKKSNLIPKPDLVRLQTVADFLNRNRNYEIHIDAHAVEGKNNEENIMISEKRSLEV 79
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ + + ++++ YG ++ A NRR + L
Sbjct: 80 ERFLLIHFVEPNQIRRLFYGNTK--SPNQTKEHEALNRRVEIQL 121
>gi|312970356|ref|ZP_07784537.1| lateral flagellar motor protein B [Escherichia coli 1827-70]
gi|310337005|gb|EFQ02143.1| lateral flagellar motor protein B [Escherichia coli 1827-70]
Length = 256
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 53/149 (35%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 70 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKT 129
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA++ G+ ++
Sbjct: 130 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRAFSARRVLEEAGMPEDKVM 189
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 190 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 217
>gi|293408386|ref|ZP_06652225.1| conserved hypothetical protein [Escherichia coli B354]
gi|291471564|gb|EFF14047.1| conserved hypothetical protein [Escherichia coli B354]
Length = 307
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 121 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKT 180
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 181 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 240
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 241 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 268
>gi|312200527|ref|YP_004020588.1| OmpA/MotB domain protein [Frankia sp. EuI1c]
gi|311231863|gb|ADP84718.1| OmpA/MotB domain protein [Frankia sp. EuI1c]
Length = 188
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 45/114 (39%), Gaps = 10/114 (8%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGL 103
SSV FD S + P + + ++ HD I G D +G+ + + L
Sbjct: 82 LMSSVNSDYLFDVGSDKLVPDAAAEIEKIVPAIQTHDGPVQILGFTDGVGTDSYNQDLSQ 141
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKE-MPS-VYGHDEDAYAKNRR-AIVFLK 154
RRA AV V G+ AS ++ G + P+ V RR + LK
Sbjct: 142 RRADAVKAILVGAGVKASLLQAIGKGSDGAPAGVPDST-------RRKVEIVLK 188
>gi|300936146|ref|ZP_07151085.1| OmpA family protein [Escherichia coli MS 21-1]
gi|300458724|gb|EFK22217.1| OmpA family protein [Escherichia coli MS 21-1]
Length = 307
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 121 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKT 180
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 181 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 240
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 241 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 268
>gi|218703545|ref|YP_002411064.1| hypothetical protein ECUMN_0293 [Escherichia coli UMN026]
gi|300899473|ref|ZP_07117721.1| OmpA family protein [Escherichia coli MS 198-1]
gi|218430642|emb|CAR11508.1| flagellar system protein [Escherichia coli UMN026]
gi|300356952|gb|EFJ72822.1| OmpA family protein [Escherichia coli MS 198-1]
Length = 307
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 121 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKT 180
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 181 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 240
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 241 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 268
>gi|315654589|ref|ZP_07907495.1| OmpA/MotB domain protein [Mobiluncus curtisii ATCC 51333]
gi|315491053|gb|EFU80672.1| OmpA/MotB domain protein [Mobiluncus curtisii ATCC 51333]
Length = 308
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 54/139 (38%), Gaps = 5/139 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSS-VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI 85
K + + L + V + +F T +I+P +VL + L + I
Sbjct: 124 KDAGKEGSLAMRITDKGLVLGMVANDTYFKTGDATIQPTAREVLKAISPTLMSIEEGIAI 183
Query: 86 EGHADELGSRNSSIALGLRRAYA----VFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
EG+AD ++ A A V G+ ++++ SYG + + +D
Sbjct: 184 EGYADPQPIASAKFPSNYHLASARAIEVLIALKDDGVPGTKLRSISYGADHQTEATPGQD 243
Query: 142 AYAKNRRAIVFLKGCRANT 160
A+A NRR + + ++
Sbjct: 244 AWAFNRRVDIVIMSTAKDS 262
>gi|193068683|ref|ZP_03049644.1| putative chemotaxis protein [Escherichia coli E110019]
gi|192958046|gb|EDV88488.1| putative chemotaxis protein [Escherichia coli E110019]
Length = 256
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 70 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKT 129
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + + +I GH D + + ++ L RA + G+ ++
Sbjct: 130 LLVELAPVFDSLNNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 189
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 190 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 217
>gi|332341583|gb|AEE54917.1| lateral flagellar motor protein B LafU [Escherichia coli UMNK88]
Length = 256
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 70 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKT 129
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 130 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 189
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 190 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 217
>gi|312964712|ref|ZP_07778963.1| lateral flagellar motor protein B [Escherichia coli 2362-75]
gi|312290733|gb|EFR18611.1| lateral flagellar motor protein B [Escherichia coli 2362-75]
Length = 254
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 51/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 68 SATELGELATSINTIVRDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKT 127
Query: 68 VLSNLGSWLEKHDCDFLIEGHADELGS---RNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + ++ L RA + G+ ++
Sbjct: 128 LLVELAPVFDSLDNKIIITGHTDAMAYKSNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 187
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 188 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 215
>gi|256024126|ref|ZP_05437991.1| hypothetical protein E4_12175 [Escherichia sp. 4_1_40B]
gi|300947286|ref|ZP_07161489.1| OmpA family protein [Escherichia coli MS 116-1]
gi|301019019|ref|ZP_07183235.1| OmpA family protein [Escherichia coli MS 196-1]
gi|299882424|gb|EFI90635.1| OmpA family protein [Escherichia coli MS 196-1]
gi|300453087|gb|EFK16707.1| OmpA family protein [Escherichia coli MS 116-1]
gi|315134915|dbj|BAJ42074.1| putative motility protein [Escherichia coli DH1]
Length = 256
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 70 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKT 129
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 130 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 189
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 190 QVSAMADQMLLDSKNPQS-AGNRRIEIMV 217
>gi|218961922|ref|YP_001741697.1| hypothetical protein CLOAM1655 [Candidatus Cloacamonas
acidaminovorans]
gi|167730579|emb|CAO81491.1| hypothetical protein CLOAM1655 [Candidatus Cloacamonas
acidaminovorans]
Length = 201
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 47/124 (37%), Gaps = 11/124 (8%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD--------CDFLIEGHADEL 92
QE + + F+ ++ ++ + L+ + +IEGH D +
Sbjct: 64 QENNEIIIPADILFEFDKSELKSDNLPKIRQFRKKLKNYMQVGDRKKRYCIIIEGHTDTV 123
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASR---MKVTSYGKEMPSVYGHDEDAYAKNRRA 149
G +N + L L R+ ++ F + ++G+ +V D KNRR
Sbjct: 124 GDKNYNYKLSLDRSLSLIKEFKEDDFFRDPDIDLIPAAFGESKLAVPTPDNTINKKNRRV 183
Query: 150 IVFL 153
++ +
Sbjct: 184 VIRI 187
>gi|260450574|gb|ACX40996.1| OmpA/MotB domain protein [Escherichia coli DH1]
gi|323943350|gb|EGB39503.1| OmpA family protein [Escherichia coli E482]
Length = 261
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 75 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKT 134
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 135 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 194
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 195 QVSAMADQMLLDSKNPQS-AGNRRIEIMV 222
>gi|331656310|ref|ZP_08357272.1| MbhA protein [Escherichia coli TA206]
gi|331054558|gb|EGI26567.1| MbhA protein [Escherichia coli TA206]
Length = 261
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 75 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKT 134
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 135 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 194
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 195 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 222
>gi|330910071|gb|EGH38581.1| flagellar motor rotation protein MotB [Escherichia coli AA86]
Length = 256
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 70 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKT 129
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 130 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 189
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 190 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 217
>gi|332559645|ref|ZP_08413967.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides WS8N]
gi|332277357|gb|EGJ22672.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides WS8N]
Length = 512
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 7/30 (23%), Positives = 13/30 (43%)
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
V +G+ +P NRR ++L+
Sbjct: 475 VEGFGEALPLACDTTVAGRRMNRRVELWLR 504
>gi|77464751|ref|YP_354255.1| OmpA family protein [Rhodobacter sphaeroides 2.4.1]
gi|77389169|gb|ABA80354.1| OmpA family protein [Rhodobacter sphaeroides 2.4.1]
Length = 512
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 7/30 (23%), Positives = 13/30 (43%)
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
V +G+ +P NRR ++L+
Sbjct: 475 VEGFGEALPLACDTTVAGRRMNRRVELWLR 504
>gi|309700460|emb|CBI99754.1| lateral flagellar motor protein B (MotB-like) [Escherichia coli
ETEC H10407]
Length = 296
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 50/149 (33%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ + + + L + + + D F+ S I P
Sbjct: 110 SATELGELATSITTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKT 169
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + + L RA + G+ ++
Sbjct: 170 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYDNWNLSGDRALSARRVLEEAGMPEDKVM 229
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 230 QVSAMADQMLLDSKNPQS-AGNRRIEIMV 257
>gi|146341585|ref|YP_001206633.1| putative chemotaxis protein MotB [Bradyrhizobium sp. ORS278]
gi|146194391|emb|CAL78416.1| putative chemotaxis protein MotB [Bradyrhizobium sp. ORS278]
Length = 276
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 47/152 (30%), Gaps = 10/152 (6%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
A+ S+ +++ + ++ + + D F S + +
Sbjct: 115 FALASASLRQALQDMPEMTEISKHIMFEETKQGLNLEIVDQDGRSMFADGSKTPYDRTRR 174
Query: 68 VLSNLGSWLEKHDCDFLIEGHADELG----SRNSSIALGLRRAYAVFNYFVARGISASRM 123
++ L + L+ I GH S + L RA AV G+ S +
Sbjct: 175 LIEKLAAPLKATPLRVQITGHTAAGFVPARSDYGAFDLSADRANAVRQILEREGLPPSHI 234
Query: 124 KVT-SYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
P D+ + A NRR + L
Sbjct: 235 FAVSGKADTQPLFP--DDPSLAANRRVTITLM 264
>gi|85859515|ref|YP_461717.1| OmpA family outer membrane protein [Syntrophus aciditrophicus SB]
gi|85722606|gb|ABC77549.1| outer membrane protein A protein family [Syntrophus aciditrophicus
SB]
Length = 226
Score = 45.6 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 46/148 (31%), Gaps = 15/148 (10%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV--------FFDTSSYSIRPAD 65
SI+ K + N SS + S+ D V F +
Sbjct: 84 ATASITADGPPTEKQTVSAKAGNNSSAVDITGSNRPDHVCVPTIYFRFNRFDVSNYEKDQ 143
Query: 66 IQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
+ L + + + GH +LGS + L L RA +V Y G S +
Sbjct: 144 LDRLVSRLKERPDRPRELRVVGHTCDLGSHPYNDHLSLMRAESVAVYLGRNGFKVS--EA 201
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
GK P + NRR + +
Sbjct: 202 KGEGKRSPV----SKVGK-LNRRVEIEI 224
>gi|299773237|gb|ADJ38693.1| outer membrane protein P5 [Haemophilus parasuis]
Length = 362
Score = 45.6 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 50/123 (40%), Gaps = 15/123 (12%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + + G+ D +G +++ L
Sbjct: 239 AFSSDVLFDFGKANLKPAAAQTLDAAHTEIVNLGLENPAVQVNGYTDRIGKDAANLTLSQ 298
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED---------AYAKNRRAIVFLK 154
+RA V NY V++G++ + + YG+ P + A + + ++
Sbjct: 299 KRAETVANYIVSKGVNPANVTAVGYGEANPVTGNTCDAVKGRKALIVCLAPD---EIQVQ 355
Query: 155 GCR 157
G +
Sbjct: 356 GSK 358
>gi|89900668|ref|YP_523139.1| OmpA/MotB [Rhodoferax ferrireducens T118]
gi|89345405|gb|ABD69608.1| OmpA/MotB [Rhodoferax ferrireducens T118]
Length = 387
Score = 45.6 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 43/124 (34%), Gaps = 12/124 (9%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADELGSRNSSIALGLR 104
S FD S++P Q L L + L+ D + + GH D +GS + L R
Sbjct: 264 VSFSADSLFDFDKASLKPTGQQDLDKLAAELKNTQFDVIKVTGHTDRIGSHAYNQKLSER 323
Query: 105 RAYAVFNYFVARGISA-SRMKVTSYGKEMPS----------VYGHDEDAYAKNRRAIVFL 153
RA AV Y + A ++ P V +RR V +
Sbjct: 324 RAEAVKGYLMTSIGIAGDKIVTKGVDGAEPVTKPGECQGKKVSKALIACLQPDRRVEVEV 383
Query: 154 KGCR 157
G R
Sbjct: 384 VGTR 387
>gi|227884752|ref|ZP_04002557.1| chemotaxis protein [Escherichia coli 83972]
gi|227838353|gb|EEJ48819.1| chemotaxis protein [Escherichia coli 83972]
gi|307552161|gb|ADN44936.1| putative motility protein [Escherichia coli ABU 83972]
Length = 256
Score = 45.6 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 70 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKT 129
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 130 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 189
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 190 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 217
>gi|215485380|ref|YP_002327811.1| hypothetical protein E2348C_0225 [Escherichia coli O127:H6 str.
E2348/69]
gi|215263452|emb|CAS07773.1| flagellar system protein MbhA [Escherichia coli O127:H6 str.
E2348/69]
Length = 261
Score = 45.6 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 51/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 75 SATELGELATSINTIVRDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKT 134
Query: 68 VLSNLGSWLEKHDCDFLIEGHADELGS---RNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + ++ L RA + G+ ++
Sbjct: 135 LLVELAPVFDSLDNKIIITGHTDAMAYKSNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 194
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 195 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 222
>gi|281177445|dbj|BAI53775.1| putative motility protein [Escherichia coli SE15]
Length = 262
Score = 45.6 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 76 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKT 135
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 136 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 195
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 196 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 223
>gi|194427556|ref|ZP_03060104.1| putative chemotaxis protein [Escherichia coli B171]
gi|194414326|gb|EDX30600.1| putative chemotaxis protein [Escherichia coli B171]
Length = 256
Score = 45.6 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 50/149 (33%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ + + + L + + + D F+ S I P
Sbjct: 70 SATELGELATSITTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKT 129
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 130 QLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 189
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 190 QVSAMADQMLLDSKNPKS-AGNRRIEIMV 217
>gi|309786020|ref|ZP_07680649.1| lateral flagellar motor protein B [Shigella dysenteriae 1617]
gi|308926131|gb|EFP71609.1| lateral flagellar motor protein B [Shigella dysenteriae 1617]
Length = 307
Score = 45.6 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 121 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKT 180
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 181 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 240
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 241 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 268
>gi|283834436|ref|ZP_06354177.1| MbhA protein [Citrobacter youngae ATCC 29220]
gi|291069983|gb|EFE08092.1| MbhA protein [Citrobacter youngae ATCC 29220]
Length = 332
Score = 45.6 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 20/120 (16%), Positives = 39/120 (32%), Gaps = 4/120 (3%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS-- 94
+ F+ S I P +L L + D +I GH D +
Sbjct: 168 VPQGLRVLIKDDQNRNMFERGSAKIMPFFKSLLVELAPVFDSLDNKIIITGHTDAMSYKS 227
Query: 95 -RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ L RA + G+ ++ S + + + ++ A NRR + +
Sbjct: 228 NIYNNWNLSGDRALSARRVLEDAGMPQDKVMQVSAMADQMLLDAKNPES-AGNRRIEIMV 286
>gi|260853484|ref|YP_003227375.1| putative lateral flagellar motor protein [Escherichia coli O26:H11
str. 11368]
gi|260866430|ref|YP_003232832.1| putative lateral flagellar motor protein [Escherichia coli O111:H-
str. 11128]
gi|257752133|dbj|BAI23635.1| predicted lateral flagellar motor protein [Escherichia coli O26:H11
str. 11368]
gi|257762786|dbj|BAI34281.1| predicted lateral flagellar motor protein [Escherichia coli O111:H-
str. 11128]
gi|323158085|gb|EFZ44184.1| lateral flagellar motor protein B [Escherichia coli EPECa14]
gi|323178474|gb|EFZ64052.1| lateral flagellar motor protein B [Escherichia coli 1180]
Length = 307
Score = 45.6 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 121 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKT 180
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 181 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 240
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 241 QVSAMADQMLLDSKNPQS-AGNRRIEIMV 268
>gi|218531252|ref|YP_002422068.1| OmpA/MotB domain protein [Methylobacterium chloromethanicum CM4]
gi|218523555|gb|ACK84140.1| OmpA/MotB domain protein [Methylobacterium chloromethanicum CM4]
Length = 296
Score = 45.6 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ V+ YG+ P E A NRR + +
Sbjct: 238 LSVSGYGRLRPVADNTSERGRATNRRIDLRI 268
>gi|26246276|ref|NP_752315.1| hypothetical protein c0378 [Escherichia coli CFT073]
gi|26106674|gb|AAN78859.1|AE016756_42 MbhA protein [Escherichia coli CFT073]
Length = 262
Score = 45.6 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 76 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKT 135
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 136 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 195
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 196 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 223
>gi|259416355|ref|ZP_05740275.1| outer membrane protein, OmpA/MotB family [Silicibacter sp.
TrichCH4B]
gi|259347794|gb|EEW59571.1| outer membrane protein, OmpA/MotB family [Silicibacter sp.
TrichCH4B]
Length = 624
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 35/108 (32%), Positives = 49/108 (45%), Gaps = 8/108 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-----FLIEGHADELGSRNSSIALGLR 104
D V F+T S IRP + L++LG+ L + FLIEGH D +G+ ++AL R
Sbjct: 508 DKVTFETGSSVIRPEQAEELTDLGNALRQMVDTNPTEVFLIEGHTDAVGAATYNLALSDR 567
Query: 105 RAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA V M + YG+ +V D + NRR V
Sbjct: 568 RAETVALALTEYFDVPPENMVIQGYGESDLAVPVLDAE--RANRRVTV 613
>gi|91218699|ref|ZP_01255595.1| probable outer membrane protein [Psychroflexus torquis ATCC 700755]
gi|91183150|gb|EAS69597.1| probable outer membrane protein [Psychroflexus torquis ATCC 700755]
Length = 197
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 39/104 (37%), Gaps = 7/104 (6%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAV 109
+++FD + IRP L + ++ + + H D + L +RA A
Sbjct: 94 TIYFDLDKFQIRPDAEVELQKIIVAMKSYPNLRIDVRSHTDSRAGDEYNQILSNKRAKAT 153
Query: 110 FNYFVARGISA-SRMKVTSYGKEMPSVYGHD-----EDAYAKNR 147
NY + + + R+ YG+ + E +A NR
Sbjct: 154 INYIIEKSRISSERISGRGYGESQLVNKCSNGIDCSESEHALNR 197
>gi|59889800|emb|CAH19156.1| Lateral flagellar motor protein B (MotB-like) [Escherichia coli]
gi|284920064|emb|CBG33121.1| lateral flagellar motor protein B (MotB-like) [Escherichia coli
042]
Length = 307
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 121 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKT 180
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 181 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 240
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 241 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 268
>gi|116622486|ref|YP_824642.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116225648|gb|ABJ84357.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076]
Length = 270
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 53/150 (35%), Gaps = 12/150 (8%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS-NLGSWLE 77
S + + +T+ + + + V F +RPAD L + +
Sbjct: 108 SNSAKISANAEATNTLASGMANALNYQLVEQGDVTFAFGKADLRPADKAALDAIVAKYNS 167
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY- 136
+ G D +GS N ++AL RRA AV Y V + + + + GKEMP
Sbjct: 168 LPRGVIELAGFTDPIGSANFNLALSRRRAQAVERYLVNQKVPLRAINIVGLGKEMPPAPF 227
Query: 137 ----------GHDEDAYAKNRRAIVFLKGC 156
+ + RR + + G
Sbjct: 228 APDQAVQAAATTKAERHQLARRVHINVYGA 257
>gi|110640466|ref|YP_668194.1| hypothetical protein ECP_0259 [Escherichia coli 536]
gi|191171446|ref|ZP_03032995.1| putative chemotaxis protein [Escherichia coli F11]
gi|110342058|gb|ABG68295.1| putative chemotaxis membrane protein [Escherichia coli 536]
gi|190908380|gb|EDV67970.1| putative chemotaxis protein [Escherichia coli F11]
gi|312944854|gb|ADR25681.1| hypothetical protein NRG857_01255 [Escherichia coli O83:H1 str. NRG
857C]
gi|320197285|gb|EFW71901.1| Flagellar motor rotation protein MotB [Escherichia coli WV_060327]
Length = 256
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 53/149 (35%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 70 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKT 129
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ +++
Sbjct: 130 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPENKVM 189
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 190 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 217
>gi|260576195|ref|ZP_05844188.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
gi|259021675|gb|EEW24978.1| OmpA/MotB domain protein [Rhodobacter sp. SW2]
Length = 507
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 38/107 (35%), Gaps = 11/107 (10%)
Query: 57 SSYSIRPADIQVLSNLGS---WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYF 113
S ++ L++L E D ++ G +D G +++AL RA V
Sbjct: 391 GSTTLDAHSRDNLADLARLLAVGEFRGQDMVLAGFSDGAGDAAANLALSQARAEGVLAAL 450
Query: 114 VARGISAS------RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
R++ +G+ +P NRR V+L+
Sbjct: 451 TKATPDLPEGQALPRIEA--FGEALPMACDTTAAGRRLNRRVEVWLR 495
>gi|238024905|ref|YP_002909137.1| OmpA/MotB [Burkholderia glumae BGR1]
gi|237879570|gb|ACR31902.1| OmpA/MotB [Burkholderia glumae BGR1]
Length = 225
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 44/103 (42%), Gaps = 5/103 (4%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHADELGS-- 94
+SL + ++ + F++ + P + VL + + L + ++EGH D +
Sbjct: 103 ASLPQGVEVTINAKILFNSGEAHLLPESMDVLDQVAAVLRDPLTANIIVEGHTDSVPIST 162
Query: 95 --RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
S+ L RA AV + + +G+ A RM +P V
Sbjct: 163 SKYESNWELSSARAGAVVRFLMDKGVGAHRMAAVGRADNVPLV 205
>gi|324019871|gb|EGB89090.1| OmpA family protein [Escherichia coli MS 117-3]
Length = 211
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 53/149 (35%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P +
Sbjct: 25 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKR 84
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 85 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 144
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 145 QVSAMADQMLLDSKNPQS-AGNRRIEIMV 172
>gi|293403376|ref|ZP_06647467.1| hypothetical protein ECGG_04086 [Escherichia coli FVEC1412]
gi|298378988|ref|ZP_06988869.1| chemotaxis protein MotB [Escherichia coli FVEC1302]
gi|291429229|gb|EFF02249.1| hypothetical protein ECGG_04086 [Escherichia coli FVEC1412]
gi|298280101|gb|EFI21605.1| chemotaxis protein MotB [Escherichia coli FVEC1302]
Length = 318
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 132 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKT 191
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 192 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 251
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 252 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 279
>gi|222032078|emb|CAP74817.1| Protein mbhA [Escherichia coli LF82]
Length = 261
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 53/149 (35%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 75 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKT 134
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ +++
Sbjct: 135 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPENKVM 194
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 195 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 222
>gi|315022385|gb|EFT35413.1| Thrombospondin type 3 repeat:OmpA/MotB [Riemerella anatipestifer
RA-YM]
Length = 145
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 54/143 (37%), Gaps = 13/143 (9%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVF----FDTSSYSIRPADIQVLSNLGSWLEKHD 80
D ++ P V N +E + F F +S IRP L N + ++
Sbjct: 3 DKCVTVPGPVSNNGCPEESQQVKEVNRDFEGIEFALNSDVIRPQSFGKLDNAANIIKGMG 62
Query: 81 CD---FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
++ G D GS + ++ L RRA +V Y V +G+SAS +K GK
Sbjct: 63 LSKQYLVVVGATDTRGSASYNLNLSKRRANSVVKYLVNKGVSASVLKAEGRGKNDLKYPE 122
Query: 138 HDEDAY------AKNRRAIVFLK 154
+ NRR +K
Sbjct: 123 CNPATKCPEWKNEANRRVYFEVK 145
>gi|144898283|emb|CAM75147.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Magnetospirillum gryphiswaldense MSR-1]
Length = 157
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 52/135 (38%), Gaps = 5/135 (3%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEK 78
G + + + +S ++FDT+ I V++++
Sbjct: 22 GCADQPKSSQAAAPPMADSPELAGAWYQ----IYFDTNKTDIDSRGRMVVNSVAHVATNN 77
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ G D +GS ++AL RRA V + +A G+ A R+ + G+ +V
Sbjct: 78 GLTRVTVIGKTDRVGSTAGNVALSQRRADQVRDALIAAGVPADRIDTSWTGEARQAVSTA 137
Query: 139 DEDAYAKNRRAIVFL 153
++ +NR V +
Sbjct: 138 NDAEEQRNRVVDVTV 152
>gi|323171084|gb|EFZ56733.1| lateral flagellar motor protein B [Escherichia coli LT-68]
Length = 307
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 121 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKT 180
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 181 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 240
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 241 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 268
>gi|213163752|ref|ZP_03349462.1| putative outer membrane lipoprotein [Salmonella enterica subsp.
enterica serovar Typhi str. E00-7866]
Length = 196
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHAD 90
T ++ + + ++ ++V FD+SS +++PA L+ + L+++ + G+ D
Sbjct: 94 GTGVSVTRSGDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVVGYTD 153
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
GS + ++ L +RA +V + + +G+ ASR++ + G P
Sbjct: 154 STGSHDLNMRLSQQRADSVASSLITQGVDASRIRTSGMGPANP 196
>gi|115526365|ref|YP_783276.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
BisA53]
gi|115520312|gb|ABJ08296.1| OmpA/MotB domain protein [Rhodopseudomonas palustris BisA53]
Length = 270
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 25/151 (16%), Positives = 45/151 (29%), Gaps = 9/151 (5%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
A S+ +++ + + + + D F S
Sbjct: 110 FATASASLRRALQDIPELTEVTKNIIFQETSQSLALEIVDHFSRPMFRQGSAVPYDWTRV 169
Query: 68 VLSNLGSWLEKHDCDFLIEGHADELGSRNSSIAL---GLRRAYAVFNYFVARGISASRMK 124
++ L L+ I GH + + + RA AV +G+ S++
Sbjct: 170 LIEKLAVPLKATALRISIVGHTSSTETARGDRDVFELSVLRADAVRRILKQQGLPTSQLF 229
Query: 125 VT-SYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
V G P D+ A NRR + L
Sbjct: 230 VVAGKGDREPLFS--DDPTMAANRRVTIALM 258
>gi|325202801|gb|ADY98255.1| ompA family protein [Neisseria meningitidis M01-240149]
Length = 242
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 46/130 (35%), Gaps = 21/130 (16%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLR 104
S+ F S+R L L + + +EGH D +GS + AL R
Sbjct: 97 ISLSAKTLFGFDKDSLRAEAQDNLKVLAQRLGQTNIQSVRVEGHTDFMGSDKYNQALSER 156
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK------------------- 145
RAY V N V+ G+ SR+ G+ + E AK
Sbjct: 157 RAYVVANNLVSNGVPVSRISAVGLGESQAQMTQVCEAEVAKLGAKVSKAKKREALIACIE 216
Query: 146 -NRRAIVFLK 154
+RR V ++
Sbjct: 217 PDRRVDVKIR 226
>gi|300310619|ref|YP_003774711.1| OmpA protein [Herbaspirillum seropedicae SmR1]
gi|300073404|gb|ADJ62803.1| OmpA protein [Herbaspirillum seropedicae SmR1]
Length = 190
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 54/144 (37%), Gaps = 3/144 (2%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD--SVFFDTSSYSIRPADIQVLSN 71
+ +G T +P V + + + F+ + + PA L
Sbjct: 47 ASVETAGGKVDKTLTVAPADVEKRYADVLGSLPARPRSYDLLFELGTDRLTPASQDALKK 106
Query: 72 -LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
+ + +F++ GHAD +GS ++ AL LRRA + + A ++V G
Sbjct: 107 AIAEIKDFPAGEFVLTGHADNIGSETNNDALSLRRARLIERELRRADVKALSIEVIGKGA 166
Query: 131 EMPSVYGHDEDAYAKNRRAIVFLK 154
P V A +NR + ++
Sbjct: 167 RDPRVPQKRGVAEPRNRFVEIKIR 190
>gi|261391899|emb|CAX49359.1| outer-membrane protein class 4 [Neisseria meningitidis 8013]
gi|325132932|gb|EGC55609.1| ompA family protein [Neisseria meningitidis M6190]
gi|325138919|gb|EGC61469.1| ompA family protein [Neisseria meningitidis ES14902]
Length = 240
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 46/130 (35%), Gaps = 21/130 (16%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLR 104
S+ F S+R L L + + +EGH D +GS + AL R
Sbjct: 95 ISLSAKTLFGFDKDSLRAEAQDNLKVLAQRLGQTNIQSVRVEGHTDFMGSDKYNQALSER 154
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK------------------- 145
RAY V N V+ G+ SR+ G+ + E AK
Sbjct: 155 RAYVVANNLVSNGVPVSRISAVGLGESQAQMTQVCEAEVAKLGAKVSKAKKREALIACIE 214
Query: 146 -NRRAIVFLK 154
+RR V ++
Sbjct: 215 PDRRVDVKIR 224
>gi|254417815|ref|ZP_05031539.1| OmpA family protein [Brevundimonas sp. BAL3]
gi|196183992|gb|EDX78968.1| OmpA family protein [Brevundimonas sp. BAL3]
Length = 384
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEK-HDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
V+FD + V+S ++ + LI G+ D GS ++ L RR+ V
Sbjct: 280 VYFDWDRSDLTTEARSVVSQAATYAKSGRPTRVLIVGYTDTSGSAAYNLGLSNRRSRTVA 339
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ VA+G++ + + + G+ + D NRRA + +
Sbjct: 340 DALVAQGVNGGVIALDAKGETALAKPTADGVREPLNRRATIDI 382
>gi|121635480|ref|YP_975725.1| outer membrane protein class 4 [Neisseria meningitidis FAM18]
gi|161870687|ref|YP_001599860.1| outer membrane protein class 4 [Neisseria meningitidis 053442]
gi|218768845|ref|YP_002343357.1| outer membrane protein class 4 [Neisseria meningitidis Z2491]
gi|60392859|sp|P0A0V2|OMP4_NEIMA RecName: Full=Outer membrane protein class 4; Flags: Precursor
gi|120867186|emb|CAM10954.1| outer membrane protein class 4 [Neisseria meningitidis FAM18]
gi|121052853|emb|CAM09205.1| outer membrane protein class 4 [Neisseria meningitidis Z2491]
gi|161596240|gb|ABX73900.1| outer membrane protein class 4 [Neisseria meningitidis 053442]
gi|254670228|emb|CBA05418.1| outer membrane protein class 4 [Neisseria meningitidis alpha153]
gi|254672496|emb|CBA05992.1| outer membrane protein class 4 [Neisseria meningitidis alpha275]
gi|308388587|gb|ADO30907.1| outer membrane protein class 4 [Neisseria meningitidis alpha710]
gi|319411080|emb|CBY91483.1| outer-membrane protein class 4 [Neisseria meningitidis WUE 2594]
gi|325142982|gb|EGC65338.1| ompA family protein [Neisseria meningitidis 961-5945]
gi|325198932|gb|ADY94388.1| ompA family protein [Neisseria meningitidis G2136]
gi|325208795|gb|ADZ04247.1| ompA family protein [Neisseria meningitidis NZ-05/33]
Length = 242
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 31/130 (23%), Positives = 46/130 (35%), Gaps = 21/130 (16%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLR 104
S+ F S+R L L + + +EGH D +GS + AL R
Sbjct: 97 ISLSAKTLFGFDKDSLRAEAQDNLKVLAQRLGQTNIQSVRVEGHTDFMGSDKYNQALSER 156
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK------------------- 145
RAY V N V+ G+ SR+ G+ + E AK
Sbjct: 157 RAYVVANNLVSNGVPVSRISAVGLGESQAQMTQVCEAEVAKLGAKVSKAKKREALIACIE 216
Query: 146 -NRRAIVFLK 154
+RR V ++
Sbjct: 217 PDRRVDVKIR 226
>gi|227821156|ref|YP_002825126.1| OmpA/MotB domain protein [Sinorhizobium fredii NGR234]
gi|227340155|gb|ACP24373.1| OmpA/MotB domain protein [Sinorhizobium fredii NGR234]
Length = 309
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 28/79 (35%), Gaps = 9/79 (11%)
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFN---------YFVARGISASRMKVTSYGKEM 132
+EGH D +GS ++ L +RA +++ + V +GK
Sbjct: 207 SLQVEGHTDSVGSEVLNMDLSAKRAASIYALMIEQKPDLVLYQNRDEQPVLSVAGFGKGR 266
Query: 133 PSVYGHDEDAYAKNRRAIV 151
P E NRR +
Sbjct: 267 PIQQNETESGRDANRRIDL 285
>gi|124266869|ref|YP_001020873.1| hypothetical protein Mpe_A1676 [Methylibium petroleiphilum PM1]
gi|124259644|gb|ABM94638.1| hypothetical protein Mpe_A1676 [Methylibium petroleiphilum PM1]
Length = 217
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 38/107 (35%), Gaps = 10/107 (9%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+V FD S R A ++ K+ L+ G D + + RA AV
Sbjct: 101 TVRFDFGSA--RVAIPPDVTAALVEDAKNSPLVLLRGRTDGTTDAPTESRIARERAAAVR 158
Query: 111 NYFVARGISASRMKVTSYGKEMP----SVYGHDEDAYAKNRRAIVFL 153
+Y VA G+ +R++ T P NRR + L
Sbjct: 159 DYLVAAGVDPARIRAT----YQPAGDHVADNASAGGRGLNRRVEIEL 201
>gi|325955198|ref|YP_004238858.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
gi|323437816|gb|ADX68280.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
Length = 753
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 9/125 (7%)
Query: 36 NESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGS 94
+ E+ ++ SV F+ IR D L L ++ +F+IEGH D G+
Sbjct: 625 EKQEALEKLANKWVGSVKFNFDQSIIRDHDFSFLDKLALLLVDNPTVNFIIEGHTDAAGT 684
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG-------KEMPSVYGHDEDAYAKNR 147
+ ++ L +RA+AV Y +G+ SRM + G + P E +NR
Sbjct: 685 ESYNLTLSEKRAFAVAQYLEGKGVDFSRMHILGIGTSAMKYPECKPVEMCE-EWKNFENR 743
Query: 148 RAIVF 152
R ++
Sbjct: 744 RVVIK 748
>gi|296131330|ref|YP_003638580.1| OmpA/MotB domain protein [Cellulomonas flavigena DSM 20109]
gi|296023145|gb|ADG76381.1| OmpA/MotB domain protein [Cellulomonas flavigena DSM 20109]
Length = 412
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 20/142 (14%), Positives = 43/142 (30%), Gaps = 12/142 (8%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
+ +L + +P + + + F + + + + E+
Sbjct: 263 VGSLPEDVVAPPQATVVETSTRSVCVLLPSVLLFGPEETELS-STEPLRGVVARATEEPA 321
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG--- 137
+EGH + G+ + RA AV ++G++ + G + P
Sbjct: 322 WVVRVEGHTADFGTPEGRARVSQDRADAVAAALRSQGVTNE-VVAVGRGADRPRADEWPA 380
Query: 138 ------HDEDAYAKNRRAIVFL 153
A NRR + L
Sbjct: 381 GPRGPHDTAAAD-VNRRVEIRL 401
>gi|170021342|ref|YP_001726296.1| hypothetical protein EcolC_3350 [Escherichia coli ATCC 8739]
gi|188495907|ref|ZP_03003177.1| lateral flagellar motor protein B [Escherichia coli 53638]
gi|169756270|gb|ACA78969.1| OmpA/MotB domain protein [Escherichia coli ATCC 8739]
gi|188491106|gb|EDU66209.1| lateral flagellar motor protein B [Escherichia coli 53638]
Length = 307
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 121 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKT 180
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 181 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 240
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 241 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 268
>gi|192291615|ref|YP_001992220.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1]
gi|192285364|gb|ACF01745.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1]
Length = 285
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 48/151 (31%), Gaps = 9/151 (5%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
A+ S+ +++ + + + D F S +
Sbjct: 125 FALASASLRQALQDVPELAEMSKNVVFEETPVGLNLELTDQDGRPMFPDGSAVPYERTRK 184
Query: 68 VLSNLGSWLEKHDCDFLIEGHADELGSRNSSIA---LGLRRAYAVFNYFVARGISASR-M 123
+++ L + L +I GH + L + RA AV G+ +S+ +
Sbjct: 185 LVARLAAPLRATSLRVIIVGHTAATVVQAGDDDPLSLSVNRANAVREVLKQEGLPSSQVL 244
Query: 124 KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ G P D A A NRR + L
Sbjct: 245 SLVGKGDGEPLFP--DAPALAANRRVTITLM 273
>gi|93005424|ref|YP_579861.1| OmpA/MotB [Psychrobacter cryohalolentis K5]
gi|92393102|gb|ABE74377.1| OmpA/MotB [Psychrobacter cryohalolentis K5]
Length = 232
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 22/148 (14%), Positives = 48/148 (32%), Gaps = 20/148 (13%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGD-----SVFFDTSSYSIRPADIQVLSNLGSWL 76
D +D ++P+ V+ + S +G VFF+ +S ++ + + + +
Sbjct: 55 DIIDNCPNTPEGVMTDEYGCPVAVSLIGYLTMELRVFFERNSNELQTKYLPEVEKVAEKM 114
Query: 77 EKHDCDFLIEGHADE---------------LGSRNSSIALGLRRAYAVFNYFVARGISAS 121
+ ++ + LG RA + V R I+
Sbjct: 115 HSNPELVVVLSGHTSELEAAHASGDIYGEMNQEKVDKRQLGRDRAQIIKTALVKRNIATD 174
Query: 122 RMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
++ MP E+ + N+R
Sbjct: 175 KIYTFDCADSMPIAPNDTEEGRSMNQRI 202
>gi|301643541|ref|ZP_07243583.1| OmpA family protein [Escherichia coli MS 146-1]
gi|307136895|ref|ZP_07496251.1| hypothetical protein EcolH7_02026 [Escherichia coli H736]
gi|301078041|gb|EFK92847.1| OmpA family protein [Escherichia coli MS 146-1]
gi|315616807|gb|EFU97424.1| lateral flagellar motor protein B [Escherichia coli 3431]
Length = 307
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 121 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKT 180
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 181 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 240
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 241 QVSAMADQMLLDSKNPQS-AGNRRIEIMV 268
>gi|170681840|ref|YP_001742391.1| hypothetical protein EcSMS35_0284 [Escherichia coli SMS-3-5]
gi|170519558|gb|ACB17736.1| lateral flagellar motor protein B [Escherichia coli SMS-3-5]
Length = 307
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 121 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKT 180
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 181 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 240
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 241 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 268
>gi|163795658|ref|ZP_02189623.1| OmpA/MotB [alpha proteobacterium BAL199]
gi|159178954|gb|EDP63489.1| OmpA/MotB [alpha proteobacterium BAL199]
Length = 285
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAV 109
+V+FD ++ L + + + + + G+AD GS ++AL RRA AV
Sbjct: 179 TVYFDFDKSTLTAQTQSTLIDAANAADDMAATNIEVSGYADRSGSEAYNMALSQRRADAV 238
Query: 110 FNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
A MK ++G+ V D AKNRR + ++
Sbjct: 239 AKELTTLIGAKAPAMKRLAFGESQNKVVTPDGVKEAKNRRVKIEIR 284
>gi|254457405|ref|ZP_05070833.1| OmpA family protein [Campylobacterales bacterium GD 1]
gi|207086197|gb|EDZ63481.1| OmpA family protein [Campylobacterales bacterium GD 1]
Length = 252
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 57/146 (39%), Gaps = 13/146 (8%)
Query: 16 MSISGIDNLDTKISSPD--------TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQ 67
+SI+ D+ T+ + + ++Q S ++ + T I
Sbjct: 111 VSITSKDDTPTEPKDMSKDDLNALFSDVISEIPEKQLSYTLYFNGIKLTDESKISLQ--- 167
Query: 68 VLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
+ + ++ I GH D G + LGL+RA AV+ IS S++ V S
Sbjct: 168 --TMIDEVSQRDKPYMQIIGHTDTAGPSEKNKILGLKRAKAVYEMIKNSDISYSKIDVDS 225
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFL 153
Y + ++ DE NRR +F+
Sbjct: 226 YSESNLAIKTEDETVEQLNRRVEIFV 251
>gi|306813285|ref|ZP_07447478.1| hypothetical protein ECNC101_15272 [Escherichia coli NC101]
gi|305854048|gb|EFM54487.1| hypothetical protein ECNC101_15272 [Escherichia coli NC101]
Length = 307
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 121 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKT 180
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 181 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 240
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 241 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 268
>gi|254459885|ref|ZP_05073301.1| OmpA family protein [Rhodobacterales bacterium HTCC2083]
gi|206676474|gb|EDZ40961.1| OmpA family protein [Rhodobacteraceae bacterium HTCC2083]
Length = 291
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 57/155 (36%), Gaps = 5/155 (3%)
Query: 11 SAITMMSISGIDNLDT----KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADI 66
A+ S DN ++ + + + ES + + S + V+F ++ + I
Sbjct: 9 VALATQVASLQDNEESLAFFANAKANLMAQESCIGDLRSLTEQARVYFPAGGLTLDESGI 68
Query: 67 QVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
+ + + + + ++EGH+D G ++ L +RA V A G+ S +
Sbjct: 69 AQARLIAALAQDCNGVEIIVEGHSDPSGDPAVNLRLSQKRAEQVIQRLGATGLDISNFRA 128
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
G PS E +RR + T
Sbjct: 129 EGLGSARPSNVTGSESDAYYDRRVEFVVIQTNTTT 163
>gi|13472587|ref|NP_104154.1| flagellar motor protein MotB [Mesorhizobium loti MAFF303099]
gi|14023333|dbj|BAB49940.1| flagellar motor protein; MotB [Mesorhizobium loti MAFF303099]
Length = 471
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 43/126 (34%), Gaps = 9/126 (7%)
Query: 33 TVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHA 89
++ + + S+ D + F+ S + + +G + I GH
Sbjct: 342 DGVSVEATDKGVVISITDQLDFGMFEVGSAVPSRELVLAMEKIGRIVNSQKGTISINGHT 401
Query: 90 DELGSR---NSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAK 145
D R + L RA++ + V G+ R+ V + P D + A
Sbjct: 402 DARPFRSASYDNWRLSTARAHSAYYMLVRGGVDERRITEVAGFADRQPKDP-ADPLS-AA 459
Query: 146 NRRAIV 151
NRR +
Sbjct: 460 NRRIEI 465
>gi|331671822|ref|ZP_08372618.1| putative motility protein [Escherichia coli TA280]
gi|331070811|gb|EGI42170.1| putative motility protein [Escherichia coli TA280]
Length = 318
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 132 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKT 191
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 192 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 251
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 252 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 279
>gi|296447841|ref|ZP_06889753.1| OmpA/MotB domain protein [Methylosinus trichosporium OB3b]
gi|296254641|gb|EFH01756.1| OmpA/MotB domain protein [Methylosinus trichosporium OB3b]
Length = 209
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 46/105 (43%), Gaps = 6/105 (5%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGLRRAYA 108
V F +S +R +D +V+ LG L + FLI GH D GS + L RRA A
Sbjct: 97 VNFALNSADLRDSDRKVVEQLGVALGEPALKGGTFLIMGHTDARGSAKLNQKLSERRANA 156
Query: 109 VFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
V VA G++ R+ YG+ ++NRR V
Sbjct: 157 VKKVLVAEYGVAPERLVAVGYGQTHLKNPNDGFA--SENRRVQVV 199
>gi|295677467|ref|YP_003605991.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
gi|295437310|gb|ADG16480.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
Length = 340
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 49/148 (33%), Gaps = 9/148 (6%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
++ D + P + ++ F + S + +S L
Sbjct: 187 ASAVQACDYPSVPVVQPAAAAQPAVVKNYTLKGDTLFAFGKSGSRDMTGKGQAEISRLAE 246
Query: 75 WLEKHDCD---FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
+ + + GHAD +GS ++ LG +RA V + +G+ ++ S G
Sbjct: 247 KILAENASLEAVTVIGHADLIGSDAAAQKLGEQRAMTVRRMLIEQGVPTLKITAESAGNS 306
Query: 132 MPSVYGHDE------DAYAKNRRAIVFL 153
P V NRR +V +
Sbjct: 307 DPVVAECSGTMQRKIACNEPNRRVVVRV 334
>gi|144899936|emb|CAM76800.1| OmpA/MotB [Magnetospirillum gryphiswaldense MSR-1]
Length = 220
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 32/144 (22%), Positives = 53/144 (36%), Gaps = 13/144 (9%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG---SWLEKH 79
+ D ++ + ++ F S I+P + +L L +
Sbjct: 74 QAAATVQGSDDAVDVGTDDRGVVMNLDAGAMFTPGSADIKPTMVPLLKELAGTLNQPRFD 133
Query: 80 DCDFLIEGHADELG----SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
+ I+GH D S+ L RA A FV+ G++ S+M V +YG+ P V
Sbjct: 134 NYRLEIQGHTDSTPVKTAQFPSNFDLASARALATMRAFVSLGVAESKMIVAAYGQFAPRV 193
Query: 136 YGHDEDA------YAKNRRAIVFL 153
ED A NRR + +
Sbjct: 194 PNTLEDGTPLPANQALNRRVAIHI 217
>gi|332308253|ref|YP_004436104.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332175582|gb|AEE24836.1| OmpA/MotB domain protein [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 266
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 50/129 (38%), Gaps = 1/129 (0%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFL 84
+ + + ++ F T S+ + + L + + + D
Sbjct: 123 ENPDRTAPQSTAAINSHAAITPIETNIQFRTGSHLVEGHYHRQLDLIAALIRQYPDLHIT 182
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+ G+ADE G N + AL +RA +V Y + + +++ S+G+ + D++
Sbjct: 183 LAGYADERGDSNYNQALSQQRAISVKRYLTKQQVPTAQLHTESFGETKMNTIESQPDSWF 242
Query: 145 KNRRAIVFL 153
R+ + +
Sbjct: 243 FARKVTLAI 251
>gi|323191390|gb|EFZ76652.1| lateral flagellar motor protein B [Escherichia coli RN587/1]
Length = 307
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 121 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKT 180
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 181 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 240
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 241 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 268
>gi|126662222|ref|ZP_01733221.1| outer membrane protein, OmpA/MotB family [Flavobacteria bacterium
BAL38]
gi|126625601|gb|EAZ96290.1| outer membrane protein, OmpA/MotB family [Flavobacteria bacterium
BAL38]
Length = 444
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 47/119 (39%), Gaps = 2/119 (1%)
Query: 36 NESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGS 94
NE++ ++FFDT+ + A L + ++L+KH G AD G
Sbjct: 325 NEATSFNYLVDQGIVNIFFDTNKDTPNTASTNNLYYIINFLKKHPEAKVRARGFADTTGD 384
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ L +RA + V GISA R+++ G++ + RR L
Sbjct: 385 EKKNEELAQKRAMNSKEFIVKSGISADRIEILGSGEDASM-DTSSKTGRQLARRVSFEL 442
>gi|114762079|ref|ZP_01441547.1| OmpA domain protein [Pelagibaca bermudensis HTCC2601]
gi|114545103|gb|EAU48106.1| OmpA domain protein [Roseovarius sp. HTCC2601]
Length = 517
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 44/104 (42%), Gaps = 4/104 (3%)
Query: 55 DTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
+T + +++Q L+ E + + G +D G +++ + RA AV +
Sbjct: 414 ETGLDAQSRSNVQQLARALEAGEYDGRELVFVGFSDAQGPAEANLEIAYERAEAVRAAVL 473
Query: 115 ARGISA--SRMK--VTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+A R++ V ++G+ MP NRR V+L+
Sbjct: 474 NAAEAADLRRLELGVEAFGEAMPMACDDTVWGRQVNRRVEVWLR 517
>gi|24373749|ref|NP_717792.1| OmpA family protein [Shewanella oneidensis MR-1]
gi|24348129|gb|AAN55236.1|AE015661_6 OmpA family protein [Shewanella oneidensis MR-1]
Length = 269
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 26/152 (17%), Positives = 68/152 (44%), Gaps = 3/152 (1%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQF--SSSVGDSVFFDTSSYSIRPADIQ 67
++++T+ ++ S+ + + Q+Q ++G +V F T S + +
Sbjct: 110 VTSLTVKQLASEQRAAEYASTQKHLDALLAEQQQLLSELALGMNVQFRTGSSELEADFLP 169
Query: 68 VLSNLGSWLEKH-DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT 126
L N+ + +++ + + ++G+A+ G + +L R V +Y + +G++ +RM
Sbjct: 170 QLDNVATVMKRSSESNLELKGYAERRGDWRDNQSLSEHRLLEVRDYLIQQGVAPARMTTQ 229
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
+ G M D ++ +RR + + +
Sbjct: 230 ALGAAMSLNEQLDSESDVSDRRVTLTIPPTQG 261
>gi|253774745|ref|YP_003037576.1| hypothetical protein ECBD_3391 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|300929521|ref|ZP_07144987.1| OmpA family protein [Escherichia coli MS 187-1]
gi|253325789|gb|ACT30391.1| OmpA/MotB domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|300462520|gb|EFK26013.1| OmpA family protein [Escherichia coli MS 187-1]
Length = 211
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 50/149 (33%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ + + + L + + + D F+ S I P
Sbjct: 25 SATELGELATSITTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKT 84
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + + L RA + G+ ++
Sbjct: 85 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYDNWNLSGDRALSARRVLEEAGMPEDKVM 144
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 145 QVSAMADQMLLDSKNPQS-AGNRRIEIMV 172
>gi|170728833|ref|YP_001762859.1| OmpA domain-containing protein [Shewanella woodyi ATCC 51908]
gi|169814180|gb|ACA88764.1| OmpA domain protein transmembrane region-containing protein
[Shewanella woodyi ATCC 51908]
Length = 341
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 45/136 (33%), Gaps = 3/136 (2%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+ L I + E +V F S S+ L + ++
Sbjct: 199 TAAVVLPAVIKETKPAPRPEPVYETKIEQSSVAVLFGFDSSSLSSTAKAKLDEVIRLSKQ 258
Query: 79 HDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
D L+ G +D G + L R V +Y A G+ ++ + G++ +
Sbjct: 259 SDNDTILLNGQSDNQGDSEYNQKLSEARVQQVADYLNANGVEVQTLEQQATGEQN--AHA 316
Query: 138 HDEDAYAKNRRAIVFL 153
+ A RR I+ L
Sbjct: 317 NSRTDRALERRVIITL 332
>gi|309797860|ref|ZP_07692242.1| OmpA family protein [Escherichia coli MS 145-7]
gi|308118544|gb|EFO55806.1| OmpA family protein [Escherichia coli MS 145-7]
Length = 211
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 51/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ + + + L + + + D F+ S I P
Sbjct: 25 SATELGELATSITTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKT 84
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 85 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 144
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 145 QVSAMADQMLLDSKNPQS-AGNRRIEIMV 172
>gi|4704601|gb|AAD28174.1|AF104303_1 fibronectin binding protein [Campylobacter jejuni]
Length = 287
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 48/121 (39%), Gaps = 4/121 (3%)
Query: 17 SISGIDNLDTKISSPDTVLNESSL---QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLG 73
++ + + + V + + ++ F +I P + + +
Sbjct: 166 AVEEVADTRPAPQAKCPVPSREGALLDENGCEKTISLEGHFGFDKTTINPTFQEKIKEIA 225
Query: 74 SW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
E D ++EGH D +GSR + L RRA +V N G+ SR+K YG++
Sbjct: 226 KVLDENERYDTILEGHTDNIGSRAYNQKLSERRAKSVANELEKYGVEKSRIKTVGYGQDN 285
Query: 133 P 133
P
Sbjct: 286 P 286
>gi|331645436|ref|ZP_08346540.1| putative motility protein [Escherichia coli M605]
gi|331045598|gb|EGI17724.1| putative motility protein [Escherichia coli M605]
Length = 318
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 132 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKT 191
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 192 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 251
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 252 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 279
>gi|154252498|ref|YP_001413322.1| OmpA/MotB domain-containing protein [Parvibaculum lavamentivorans
DS-1]
gi|154156448|gb|ABS63665.1| OmpA/MotB domain protein [Parvibaculum lavamentivorans DS-1]
Length = 277
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+++F Y++ P V+ + + + GH D GS + ALG RRA +V
Sbjct: 179 TIYFGFDKYNLTPEAQSVIDQIV---AETTGPLSVIGHTDTSGSSAYNQALGQRRADSVS 235
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
N A+G S G+ +V D NRRA+V
Sbjct: 236 NALTAQGKELC--SAVSRGETELAVQTGDGVREPLNRRAVV 274
>gi|331640759|ref|ZP_08341894.1| putative motility protein [Escherichia coli H736]
gi|331037557|gb|EGI09777.1| putative motility protein [Escherichia coli H736]
Length = 318
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 132 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKT 191
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 192 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 251
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 252 QVSAMADQMLLDSKNPQS-AGNRRIEIMV 279
>gi|237707997|ref|ZP_04538478.1| major outer membrane protein OmpA [Bacteroides sp. 9_1_42FAA]
gi|265754217|ref|ZP_06089406.1| major outer membrane protein OmpA [Bacteroides sp. 3_1_33FAA]
gi|229457983|gb|EEO63704.1| major outer membrane protein OmpA [Bacteroides sp. 9_1_42FAA]
gi|263234926|gb|EEZ20481.1| major outer membrane protein OmpA [Bacteroides sp. 3_1_33FAA]
Length = 395
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 46/126 (36%), Gaps = 9/126 (7%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIE 86
+ P V+ E Q + + SVFF S + L + ++ + +
Sbjct: 274 ANQPTEVVTEQVTVNQIAPA-PQSVFFQIGSAVLPTNSTVNLQQIADLVKDNPGLKLKVT 332
Query: 87 GHADELG-SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
G+AD S + L RA V N V G++ + + ++ G A
Sbjct: 333 GYADSDTGSAAWNKQLSEDRANNVANELVKLGVNKNNLIISGMGGVNTLTPP------AF 386
Query: 146 NRRAIV 151
NRR I+
Sbjct: 387 NRRVII 392
>gi|150003007|ref|YP_001297751.1| major outer membrane protein OmpA [Bacteroides vulgatus ATCC 8482]
gi|319642207|ref|ZP_07996867.1| major outer membrane protein OmpA [Bacteroides sp. 3_1_40A]
gi|149931431|gb|ABR38129.1| major outer membrane protein OmpA [Bacteroides vulgatus ATCC 8482]
gi|317386193|gb|EFV67112.1| major outer membrane protein OmpA [Bacteroides sp. 3_1_40A]
Length = 399
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 46/126 (36%), Gaps = 9/126 (7%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIE 86
+ P V+ E Q + + SVFF S + L + ++ + +
Sbjct: 278 ANQPTEVVTEQVTVNQIAPA-PQSVFFQIGSAVLPTNSTVNLQQIADLVKDNPGLKLKVT 336
Query: 87 GHADELG-SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
G+AD S + L RA V N V G++ + + ++ G A
Sbjct: 337 GYADSDTGSAAWNKQLSEDRANNVANELVKLGVNKNNLIISGMGGVNTLTPP------AF 390
Query: 146 NRRAIV 151
NRR I+
Sbjct: 391 NRRVII 396
>gi|149912029|ref|ZP_01900622.1| sodium-type flagellar protein MotY [Moritella sp. PE36]
gi|149804890|gb|EDM64925.1| sodium-type flagellar protein MotY [Moritella sp. PE36]
Length = 293
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 37/98 (37%), Gaps = 2/98 (2%)
Query: 58 SYSIRPADIQVLSNLGSWLEKHD--CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA 115
S + L+ + +L+ +++ + G ++ RA + YF+
Sbjct: 191 SDELTQQSQLRLAMITEFLQYSPDINVVVVDSYTGSYGDELQNLQTSSLRAENIKQYFLD 250
Query: 116 RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G+ ++ YG++ + KN+R ++ L
Sbjct: 251 NGLKNLEIQTNGYGEKSQIASNGNIIERQKNQRVVISL 288
>gi|347157|gb|AAC36901.1| protein F [Pseudomonas fluorescens]
Length = 296
Score = 45.2 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALG 102
V V FD ++P + NL ++ + + + GH D +G + L
Sbjct: 208 QVVRVELDVKFDFDKAVVKPNSYGDVKNLADFMAQYPATNVEVAGHTDSVGPDAYNQKLS 267
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYG 129
RRA AV V G++ SR+ YG
Sbjct: 268 QRRADAVKQVLVKDGVAPSRVTAVGYG 294
>gi|260222452|emb|CBA32030.1| Chemotaxis protein motB [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 313
Score = 44.8 bits (104), Expect = 0.003, Method: Composition-based stats.
Identities = 32/159 (20%), Positives = 59/159 (37%), Gaps = 12/159 (7%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPAD 65
L+A+ S I N + K++ + + + + D FD S S++P
Sbjct: 128 TLAALAAKIASTISN-NPKMAEFSSQIKLEITPDGLQIQIVDDQRRPMFDIGSSSVKPYM 186
Query: 66 IQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSSIALGLRRAYAVFNYFVARGISA 120
+L +G L D ++GH D+ S+ L RA A +A G+
Sbjct: 187 RDILKEIGVTLADVDNKISLDGHTDQTPYGNAARGYSNWELSADRANASRRELIAAGMPE 246
Query: 121 SRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
+++ +V + + A NRR + + A
Sbjct: 247 NKLARVVGMASS-LLADPQNPLSPA-NRRISILVMTKEA 283
>gi|218688122|ref|YP_002396334.1| hypothetical protein ECED1_0264 [Escherichia coli ED1a]
gi|218425686|emb|CAR06478.1| flagellar system protein [Escherichia coli ED1a]
Length = 296
Score = 44.8 bits (104), Expect = 0.003, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 110 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKT 169
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 170 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 229
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 230 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 257
>gi|323976251|gb|EGB71344.1| OmpA family protein [Escherichia coli TW10509]
gi|327254574|gb|EGE66190.1| lateral flagellar motor protein B [Escherichia coli STEC_7v]
Length = 307
Score = 44.8 bits (104), Expect = 0.003, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 51/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 121 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKT 180
Query: 68 VLSNLGSWLEKHDCDFLIEGHADELGS---RNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + ++ L RA + G+ ++
Sbjct: 181 LLVELAPVFDSLDNKIIITGHTDAMAYKSNIYNNWNLSGDRALSARRVLEDAGMPEDKVM 240
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 241 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 268
>gi|300114849|ref|YP_003761424.1| OmpA/MotB domain-containing protein [Nitrosococcus watsonii C-113]
gi|299540786|gb|ADJ29103.1| OmpA/MotB domain protein [Nitrosococcus watsonii C-113]
Length = 280
Score = 44.8 bits (104), Expect = 0.003, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 43/112 (38%), Gaps = 5/112 (4%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
+ ++ +++++ + + F + S L + + L+K + ++ GH D+
Sbjct: 136 EGLITIETIKDRIIIRIQEKGSFPSGSAIFSREFKPALDKIRAILKKIEGKLIVAGHTDD 195
Query: 92 LGS----RNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGH 138
S+ L RA +V +Y +A IS R + Y P
Sbjct: 196 RPIQTSRFRSNWELSTARAVSVVHYLLATHEISPGRFVLEGYADTQPLAPNE 247
>gi|46398701|gb|AAS92036.1| IcmN protein [Legionella pneumophila]
Length = 170
Score = 44.8 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 45/119 (37%), Gaps = 1/119 (0%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
+S+ + + S+ S F S + A +L+ + ++ + + ++ + S
Sbjct: 48 VASVGQNYLISIPASALFADQSPRLNWASYSLLNEIAAFLKQFRKIAITVTSYSSKYVSV 107
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
AL L R+ V Y ++G+ + + G + P + N R + +
Sbjct: 108 KRERALTLARSRVVSEYLWSQGVDSRIIFTQGLGSDKPITSYTLGGDRSPNARVEITFR 166
>gi|300921970|ref|ZP_07138116.1| OmpA family protein [Escherichia coli MS 182-1]
gi|301325438|ref|ZP_07218924.1| OmpA family protein [Escherichia coli MS 78-1]
gi|300421640|gb|EFK04951.1| OmpA family protein [Escherichia coli MS 182-1]
gi|300847736|gb|EFK75496.1| OmpA family protein [Escherichia coli MS 78-1]
Length = 211
Score = 44.8 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 25 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKT 84
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 85 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 144
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 145 QVSAMADQMLLDSKNPQS-AGNRRIEIMV 172
>gi|39935962|ref|NP_948238.1| chemotaxis protein MotB2 [Rhodopseudomonas palustris CGA009]
gi|39649816|emb|CAE28338.1| possible chemotaxis protein MotB2 [Rhodopseudomonas palustris
CGA009]
Length = 326
Score = 44.8 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 48/151 (31%), Gaps = 9/151 (5%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
A+ S+ +++ + + + D F S +
Sbjct: 166 FALASASLRQALQDVPELAEMSKNVVFEETPVGLNLELTDQDGRPMFPDGSAVPYERTRK 225
Query: 68 VLSNLGSWLEKHDCDFLIEGHADELGSRNSSIA---LGLRRAYAVFNYFVARGISASR-M 123
+++ L + L +I GH + L + RA AV G+ +S+ +
Sbjct: 226 LVARLAAPLRATSLRVIIVGHTAATVVQAGDDDPLSLSVNRANAVREVLKQEGLPSSQVL 285
Query: 124 KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ G P D A A NRR + L
Sbjct: 286 SLVGKGDGEPLFP--DAPALAANRRVTITLM 314
>gi|88801593|ref|ZP_01117121.1| OmpA family protein [Polaribacter irgensii 23-P]
gi|88782251|gb|EAR13428.1| OmpA family protein [Polaribacter irgensii 23-P]
Length = 651
Score = 44.8 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 12/116 (10%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
++++FD++ ++IR L + S + + H D G+R + L RRA +
Sbjct: 516 NTIYFDSNKWNIRSEAAIELDKIVSIMTKYPKIIVASASHTDAKGNRAYNKILSQRRAKS 575
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA-----------YAKNRRAIVFL 153
+Y + +GIS R+ +G++ + D DA + +NRR +
Sbjct: 576 AVDYIIYKGISPERIYGKGFGEDELTNKCVDNDAHSNRVKCSKLQHQENRRTSFLV 631
>gi|325134964|gb|EGC57596.1| ompA family protein [Neisseria meningitidis M13399]
gi|325136954|gb|EGC59551.1| ompA family protein [Neisseria meningitidis M0579]
gi|325145176|gb|EGC67458.1| ompA family protein [Neisseria meningitidis M01-240013]
Length = 242
Score = 44.8 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 1/88 (1%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLR 104
S+ F S+R L L + +EGH D +GS + AL R
Sbjct: 97 ISLSAKTLFGFDKDSLRAEAQDNLKVLAQRLSRTNIQSVRVEGHTDFMGSDKYNQALSER 156
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEM 132
RAY V N V+ G+ SR+ G+
Sbjct: 157 RAYVVANNLVSNGVPVSRISAVGLGESQ 184
>gi|46398697|gb|AAS92034.1| IcmN protein [Legionella pneumophila]
Length = 166
Score = 44.8 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 45/119 (37%), Gaps = 1/119 (0%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
+S+ + + S+ S F S + A +L+ + ++ + + ++ + S
Sbjct: 44 VASVGQNYLISIPASALFADQSPRLHWASYSLLNEIATFLKQFRKIAITVTSYSSKYVSV 103
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
AL L R+ V Y ++G+ + + G + P + N R + +
Sbjct: 104 KRERALTLARSRVVSEYLWSQGVDSRIIFTQGLGSDKPITSYTLGGDRSPNARVEITFR 162
>gi|89067386|ref|ZP_01154899.1| OmpA domain protein [Oceanicola granulosus HTCC2516]
gi|89046955|gb|EAR53009.1| OmpA domain protein [Oceanicola granulosus HTCC2516]
Length = 485
Score = 44.8 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 40/115 (34%), Gaps = 7/115 (6%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE---KHDCDFLIEGHADELGSRNSSIALG 102
+ + F + + P L L + + L+ G D +G +++ LG
Sbjct: 370 VRLSTTFRFGRGATELDPQSRTNLFQLAADIRDGAHDGQTLLLLGFTDGIGPASANRRLG 429
Query: 103 LRRAYAVFNYFVARG----ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA V +A ++ +G+ +P E NRR +++
Sbjct: 430 AERADEVLATLLAALGGALPEGVEVRTEGFGEALPMGCDDTEWGRQINRRVELWV 484
>gi|325205456|gb|ADZ00909.1| ompA family protein [Neisseria meningitidis M04-240196]
Length = 244
Score = 44.8 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLR 104
S+ F S+R L L L + + +EGH D +GS + AL R
Sbjct: 99 ISLSAKTLFGFDKDSLRAEAQDNLKVLAQRLSRTNVQSVRVEGHTDFMGSDKYNQALSER 158
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEM 132
RAY V N V+ G+ SR+ G+
Sbjct: 159 RAYVVANNLVSNGVPVSRISAVGLGESQ 186
>gi|319783370|ref|YP_004142846.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317169258|gb|ADV12796.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 185
Score = 44.8 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 43/108 (39%), Gaps = 8/108 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-----LEKHDCDFLIEGHADELGSRNSSIALGLR 104
S+ F S +I + + + LIEGH D +GS S+ AL +
Sbjct: 72 QSINFAFGSAAIANSQYDKIETIADALRRILRRDPGARVLIEGHTDAVGSFQSNQALSEQ 131
Query: 105 RAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA ++ V ++ YG+E V +E+ +NRR +
Sbjct: 132 RAASLKRTLVREFRVPGHALETVGYGEEFLLVQTQNENW--QNRRVTL 177
>gi|34499026|ref|NP_903241.1| outer membrane protein A [Chromobacterium violaceum ATCC 12472]
gi|34104876|gb|AAQ61233.1| outer membrane protein A precursor [Chromobacterium violaceum ATCC
12472]
Length = 226
Score = 44.8 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 57/168 (33%), Gaps = 32/168 (19%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS 74
++ + +P L + ++ V FD + +R L L +
Sbjct: 57 LVECGDREAAKPVAEAPKPALVSV----KEKVTLSAKVLFDFNKSVLRADAKNELDPLVA 112
Query: 75 WLEKHDCD-----FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
L+ H ++G+ D +GS + AL RA AV YFV G+ A ++ G
Sbjct: 113 KLKAHAGKGYLNGVEVDGYTDFMGSDKLNNALSQNRADAVKAYFVNAGVPAEKVTSIGKG 172
Query: 130 KEMPSVYGHDEDAYAK--------------------NRRAIVFLKGCR 157
K + E+ AK +RR V + +
Sbjct: 173 KAEAKM---TEECKAKFPKYAKNKKQNAEIKACIESDRRVEVTIDAVK 217
>gi|294491414|gb|ADE90170.1| putative chemotaxis protein [Escherichia coli IHE3034]
gi|307628268|gb|ADN72572.1| hypothetical protein UM146_16065 [Escherichia coli UM146]
gi|323953128|gb|EGB48996.1| OmpA family protein [Escherichia coli H252]
Length = 256
Score = 44.8 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 54/149 (36%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 70 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKT 129
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L L+ D +I GH D + + ++ L RA + G+ +++
Sbjct: 130 LLVELAPVLDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPENKVM 189
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 190 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 217
>gi|254805583|ref|YP_003083804.1| class 4 outer membrane protein [Neisseria meningitidis alpha14]
gi|254669125|emb|CBA07752.1| class 4 outer membrane protein [Neisseria meningitidis alpha14]
Length = 242
Score = 44.8 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLR 104
S+ F S+R L L L + + +EGH D +GS + AL R
Sbjct: 97 ISLSAKTLFGFDKDSLRAEAQDNLKVLAQRLSRTNVQSVRVEGHTDFMGSDKYNQALSER 156
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEM 132
RAY V N V+ G+ SR+ G+
Sbjct: 157 RAYVVANNLVSNGVPVSRISAVGLGESQ 184
>gi|15676296|ref|NP_273431.1| outer membrane protein class 4 [Neisseria meningitidis MC58]
gi|304386635|ref|ZP_07368919.1| outer membrane protein class 4 [Neisseria meningitidis ATCC 13091]
gi|60416397|sp|P0A0V3|OMP4_NEIMB RecName: Full=Outer membrane protein class 4; Flags: Precursor
gi|7225603|gb|AAF40822.1| outer membrane protein class 4 [Neisseria meningitidis MC58]
gi|304339285|gb|EFM05361.1| outer membrane protein class 4 [Neisseria meningitidis ATCC 13091]
gi|316984886|gb|EFV63842.1| ompA family protein [Neisseria meningitidis H44/76]
gi|325128875|gb|EGC51731.1| ompA family protein [Neisseria meningitidis N1568]
gi|325141028|gb|EGC63534.1| ompA family protein [Neisseria meningitidis CU385]
gi|325199575|gb|ADY95030.1| ompA family protein [Neisseria meningitidis H44/76]
gi|325203490|gb|ADY98943.1| ompA family protein [Neisseria meningitidis M01-240355]
Length = 242
Score = 44.8 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLR 104
S+ F S+R L L L + + +EGH D +GS + AL R
Sbjct: 97 ISLSAKTLFGFDKDSLRAEAQDNLKVLAQRLSRTNVQSVRVEGHTDFMGSDKYNQALSER 156
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEM 132
RAY V N V+ G+ SR+ G+
Sbjct: 157 RAYVVANNLVSNGVPVSRISAVGLGESQ 184
>gi|301019118|ref|ZP_07183322.1| OmpA family protein [Escherichia coli MS 69-1]
gi|300399377|gb|EFJ82915.1| OmpA family protein [Escherichia coli MS 69-1]
Length = 211
Score = 44.8 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 25 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKT 84
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 85 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 144
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 145 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 172
>gi|291613013|ref|YP_003523170.1| OmpA/MotB domain protein [Sideroxydans lithotrophicus ES-1]
gi|291583125|gb|ADE10783.1| OmpA/MotB domain protein [Sideroxydans lithotrophicus ES-1]
Length = 341
Score = 44.8 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 38/134 (28%), Gaps = 20/134 (14%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS-- 94
+ + F + S + P +L +G L + GH D
Sbjct: 159 TTEGLRVQIVDEKNRPMFQSGSSELEPYTKDILHEIGQMLNTMPNKISLSGHTDAQPYVT 218
Query: 95 ---RNSSIALGLRRAYAVFNYFVARGISASRM-------KVTSYGKEMPSVYGHDEDAYA 144
S+ L RA A + G++ ++ + K P
Sbjct: 219 ADRHYSNWELSADRANASRRELINGGLAEDKIVRVVGLSSAVLFDKAQPLNP-------- 270
Query: 145 KNRRAIVFLKGCRA 158
NRR + + RA
Sbjct: 271 INRRISIIVMNKRA 284
>gi|117622532|ref|YP_851445.1| hypothetical protein APECO1_1739 [Escherichia coli APEC O1]
gi|237707752|ref|ZP_04538233.1| MbhA protein [Escherichia sp. 3_2_53FAA]
gi|115511656|gb|ABI99730.1| putative motility protein MbhA [Escherichia coli APEC O1]
gi|226898962|gb|EEH85221.1| MbhA protein [Escherichia sp. 3_2_53FAA]
gi|323958690|gb|EGB54391.1| OmpA family protein [Escherichia coli H263]
Length = 261
Score = 44.8 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 54/149 (36%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 75 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKT 134
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L L+ D +I GH D + + ++ L RA + G+ +++
Sbjct: 135 LLVELAPVLDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPENKVM 194
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 195 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 222
>gi|86747447|ref|YP_483943.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
gi|86570475|gb|ABD05032.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
Length = 651
Score = 44.8 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 52/128 (40%), Gaps = 8/128 (6%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-----WLEKHDCDFL 84
S D + S++++ S +++ F+T S+ I P L + FL
Sbjct: 501 SMDEIRYSPSVRQRMPSIDLNTITFETGSWDIPPDQAAKLQVIADGLNRAIQRNPREVFL 560
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAY 143
IEGH D +G+ +++L RRA + + + YG++ V +
Sbjct: 561 IEGHTDAVGNDTDNLSLSDRRAESAATLLTQQFGVPAENLTSQGYGEQYLKVPTDGPE-- 618
Query: 144 AKNRRAIV 151
+NRR V
Sbjct: 619 RQNRRVTV 626
>gi|262173363|ref|ZP_06041040.1| Flagellar motor rotation protein MotB [Vibrio mimicus MB-451]
gi|261890721|gb|EEY36708.1| Flagellar motor rotation protein MotB [Vibrio mimicus MB-451]
Length = 315
Score = 44.8 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 50/153 (32%), Gaps = 11/153 (7%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSN 71
+ ++ + S +N + + + D F + P +L
Sbjct: 129 LTLLAKVVKKVIGQVSAQGNVNVTVTPQGLRIVLQDDYKQFMFSRGGSELTPFFEDLLLA 188
Query: 72 LGSWLEKHDCDFLIEGHADELG-----SRNSSIALGLRRAYAVFNYFVARGISASR-MKV 125
L ++ +I GH D + S+ S+ L RA V G+ A R ++V
Sbjct: 189 LAPVFQRVANPIIISGHTDSIPFRKKISKTSNWELSASRANVARKTLVDGGMPAERVLQV 248
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
T ++NRR +F+ A
Sbjct: 249 TGMSDRALL--NQTAPDSSENRRIELFVLTTPA 279
>gi|323528401|ref|YP_004230553.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1001]
gi|323385403|gb|ADX57493.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1001]
Length = 233
Score = 44.8 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 45/118 (38%), Gaps = 5/118 (4%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLI 85
+ + S + ++ V F++ + P VL + + L + L+
Sbjct: 100 APLQDNRQITISHTPQGVEIAINAKVLFNSGDARLLPESFAVLGQIATVLRDRAKNNILV 159
Query: 86 EGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
EGH D L S+ L RA AV +F RGI A RM P + G+D
Sbjct: 160 EGHTDSLPIATAKYESNWELSSARAGAVVRFFADRGIEAHRMAAIGRADNFPLIIGND 217
>gi|91209318|ref|YP_539304.1| hypothetical protein UTI89_C0270 [Escherichia coli UTI89]
gi|91070892|gb|ABE05773.1| putative motility protein MbhA [Escherichia coli UTI89]
Length = 262
Score = 44.8 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 54/149 (36%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 76 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKT 135
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L L+ D +I GH D + + ++ L RA + G+ +++
Sbjct: 136 LLVELAPVLDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPENKVM 195
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 196 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 223
>gi|238023265|ref|ZP_04603691.1| hypothetical protein GCWU000324_03192 [Kingella oralis ATCC 51147]
gi|237865648|gb|EEP66788.1| hypothetical protein GCWU000324_03192 [Kingella oralis ATCC 51147]
Length = 176
Score = 44.8 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 33/144 (22%), Positives = 52/144 (36%), Gaps = 12/144 (8%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL---GSWLEKHDCD 82
+ V+ E ++ S+ F + + + P L L + H
Sbjct: 33 EEAPVAQPVVAEPQVERINLSADALLRFNQSDAADMLPEGKATLDRLPENLVSCQAHIDG 92
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD--- 139
+ GH D LGS + LGL+RA V NY +G+ A + V S G+ P
Sbjct: 93 IALTGHTDRLGSEQYNYNLGLQRAQTVKNYLQGKGVQAP-ISVASAGESQPVTTACTGTR 151
Query: 140 -----EDAYAKNRRAIVFLKGCRA 158
+ +RR V + G A
Sbjct: 152 ATAALKACLQPDRRVTVDISGTAA 175
>gi|212690547|ref|ZP_03298675.1| hypothetical protein BACDOR_00029 [Bacteroides dorei DSM 17855]
gi|254883655|ref|ZP_05256365.1| major outer membrane protein OmpA [Bacteroides sp. 4_3_47FAA]
gi|294775642|ref|ZP_06741150.1| OmpA family protein [Bacteroides vulgatus PC510]
gi|212666896|gb|EEB27468.1| hypothetical protein BACDOR_00029 [Bacteroides dorei DSM 17855]
gi|254836448|gb|EET16757.1| major outer membrane protein OmpA [Bacteroides sp. 4_3_47FAA]
gi|294450486|gb|EFG18978.1| OmpA family protein [Bacteroides vulgatus PC510]
Length = 401
Score = 44.8 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 46/126 (36%), Gaps = 9/126 (7%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIE 86
+ P V+ E Q + + SVFF S + L + ++ + +
Sbjct: 280 ANQPTEVVTEQVTVNQIAPA-PQSVFFQIGSAVLPTNSTVNLQQIADLVKDNPGLKLKVT 338
Query: 87 GHADELG-SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
G+AD S + L RA V N V G++ + + ++ G A
Sbjct: 339 GYADSDTGSAAWNKQLSEDRANNVANELVKLGVNKNNLIISGMGGVNTLTPP------AF 392
Query: 146 NRRAIV 151
NRR I+
Sbjct: 393 NRRVII 398
>gi|300991173|ref|ZP_07179516.1| OmpA family protein [Escherichia coli MS 200-1]
gi|300305611|gb|EFJ60131.1| OmpA family protein [Escherichia coli MS 200-1]
gi|324015565|gb|EGB84784.1| OmpA family protein [Escherichia coli MS 60-1]
Length = 211
Score = 44.8 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 53/149 (35%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 25 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKT 84
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ +++
Sbjct: 85 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPENKVM 144
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 145 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 172
>gi|300902537|ref|ZP_07120514.1| OmpA family protein [Escherichia coli MS 84-1]
gi|301302019|ref|ZP_07208152.1| OmpA family protein [Escherichia coli MS 124-1]
gi|300405350|gb|EFJ88888.1| OmpA family protein [Escherichia coli MS 84-1]
gi|300842571|gb|EFK70331.1| OmpA family protein [Escherichia coli MS 124-1]
gi|315253712|gb|EFU33680.1| OmpA family protein [Escherichia coli MS 85-1]
Length = 211
Score = 44.8 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 25 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKT 84
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 85 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 144
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 145 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 172
>gi|46398707|gb|AAS92039.1| IcmN protein [Legionella pneumophila]
Length = 168
Score = 44.8 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 45/119 (37%), Gaps = 1/119 (0%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
+S+ + + S+ S F S + A +L+ + ++ + + ++ + S
Sbjct: 46 VASVGQNYLISIPASALFADQSPRLNWASYSLLNEIAAFLKQFRKIAITVTSYSSKYVSV 105
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
AL L R+ V Y ++G+ + + G + P + N R + +
Sbjct: 106 KRERALTLARSRVVSEYLWSQGVDSRIIFTQGLGSDKPITSYTLGGDRSPNARVEITFR 164
>gi|218698824|ref|YP_002406453.1| hypothetical protein ECIAI39_0419 [Escherichia coli IAI39]
gi|218368810|emb|CAR16558.1| flagellar system protein [Escherichia coli IAI39]
Length = 261
Score = 44.8 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 51/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 75 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKT 134
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 135 LLVEFAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 194
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 195 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 222
>gi|88858356|ref|ZP_01132998.1| hypothetical protein PTD2_13239 [Pseudoalteromonas tunicata D2]
gi|88819973|gb|EAR29786.1| hypothetical protein PTD2_13239 [Pseudoalteromonas tunicata D2]
Length = 247
Score = 44.8 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 53/119 (44%), Gaps = 1/119 (0%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSI 99
Q++ + + +V F + S +I L + + + D ++G AD G +++
Sbjct: 119 QQRLDNLMAMTVQFRSGSSAIEAHFASQLDEVAAVLAQNPDLSLDLQGFADRRGDEQANL 178
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
L +R V Y V +G++A R+ ++G++ D + +RR + K +A
Sbjct: 179 ILSKQRVTNVKAYLVKQGVNAVRLNTDAFGEQHALAAQQDFEGDFFDRRVTLKAKNNQA 237
>gi|218550065|ref|YP_002383856.1| hypothetical protein EFER_2750 [Escherichia fergusonii ATCC 35469]
gi|218357606|emb|CAQ90245.1| flagellar system protein [Escherichia fergusonii ATCC 35469]
Length = 296
Score = 44.8 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 51/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 110 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKT 169
Query: 68 VLSNLGSWLEKHDCDFLIEGHADELGS---RNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + ++ L RA + G+ ++
Sbjct: 170 LLVELAPVFDSLDNKIIITGHTDAMAYKSNIYNNWNLSGDRALSARRVLEDAGMPEDKVM 229
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 230 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 257
>gi|300955691|ref|ZP_07168041.1| OmpA family protein [Escherichia coli MS 175-1]
gi|2494512|sp|Q47154|MBHA_ECOLI RecName: Full=Putative protein mbhA
gi|984586|dbj|BAA07592.1| MbhA [Escherichia coli W3110]
gi|1552798|gb|AAB08650.1| MbhA [Escherichia coli]
gi|300317442|gb|EFJ67226.1| OmpA family protein [Escherichia coli MS 175-1]
Length = 211
Score = 44.8 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 25 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKT 84
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 85 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 144
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 145 QVSAMADQMLLDSKNPQS-AGNRRIEIMV 172
>gi|91976556|ref|YP_569215.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
gi|91683012|gb|ABE39314.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
Length = 273
Score = 44.8 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 26/152 (17%), Positives = 41/152 (26%), Gaps = 10/152 (6%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
A+ S+ +IS + ++ + + D F S +
Sbjct: 112 FALASASLRQALQDLPEISELSKNVMFEETKQGLNLEIMDQDGRAMFADGSKAPFERTRL 171
Query: 68 VLSNLGSWLEKHDCDFLIEGHAD----ELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
+L L + L I GH S + L RA V G+ S +
Sbjct: 172 LLQRLAAPLRATPLRVSIVGHTSAGSVSQRSDYNGFDLSADRANVVRQILEREGLPVSHI 231
Query: 124 KVT-SYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
P A NRR + L
Sbjct: 232 FAVTGKADTQPLFPEDPSI--AANRRVTITLM 261
>gi|300919511|ref|ZP_07136009.1| OmpA family protein [Escherichia coli MS 115-1]
gi|300413405|gb|EFJ96715.1| OmpA family protein [Escherichia coli MS 115-1]
Length = 211
Score = 44.8 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 25 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKT 84
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 85 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 144
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 145 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 172
>gi|300977371|ref|ZP_07173862.1| OmpA family protein [Escherichia coli MS 45-1]
gi|301045873|ref|ZP_07193060.1| OmpA family protein [Escherichia coli MS 185-1]
gi|300302123|gb|EFJ58508.1| OmpA family protein [Escherichia coli MS 185-1]
gi|300409896|gb|EFJ93434.1| OmpA family protein [Escherichia coli MS 45-1]
gi|315295164|gb|EFU54499.1| OmpA family protein [Escherichia coli MS 153-1]
gi|315300866|gb|EFU60088.1| OmpA family protein [Escherichia coli MS 16-3]
gi|324010200|gb|EGB79419.1| OmpA family protein [Escherichia coli MS 57-2]
Length = 211
Score = 44.8 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 25 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKT 84
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 85 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 144
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 145 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 172
>gi|222147584|ref|YP_002548541.1| flagellar motor protein MotB [Agrobacterium vitis S4]
gi|221734572|gb|ACM35535.1| flagellar motor protein [Agrobacterium vitis S4]
Length = 444
Score = 44.8 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 45/109 (41%), Gaps = 6/109 (5%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS---RNSSIALGLRRAYAV 109
FD S R + + +G L + +I GH D N + L + RA++
Sbjct: 337 MFDVGSAVPRKEMVLAMEKIGKLLAERQGAVVIRGHTDARQYKGPDNDNWGLSMSRAHSA 396
Query: 110 FNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
+ V G++ +R+ V+ + D A A NRR + ++G +
Sbjct: 397 YYMLVRGGLAQNRITQVSGFADRRLLKP-EDPLA-AANRRIEILVQGDQ 443
>gi|42522454|ref|NP_967834.1| outer membrane protein [Bdellovibrio bacteriovorus HD100]
gi|39574986|emb|CAE78827.1| outer membrane protein [Bdellovibrio bacteriovorus HD100]
Length = 368
Score = 44.8 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 51/133 (38%), Gaps = 11/133 (8%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD---CDFL 84
+++ + + + G ++ F +S Y+I AD + L + L ++
Sbjct: 231 VAAVEAGSALKDVNMNMIAGAGSAIQFRSSQYAISGADNRKLQQVAKVLNENPDLVERVE 290
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
I G+AD G+ + + RA +V N G + ++ G +
Sbjct: 291 IHGYADATGTDEINQRISQARADSVKNILERNGFT--NVEAVGKGAT------DSTGIRS 342
Query: 145 KNRRAIVFLKGCR 157
++RRA + G +
Sbjct: 343 QDRRAELVFVGVK 355
>gi|258622497|ref|ZP_05717519.1| chemotaxis LafU protein [Vibrio mimicus VM573]
gi|258585197|gb|EEW09924.1| chemotaxis LafU protein [Vibrio mimicus VM573]
Length = 315
Score = 44.8 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 50/153 (32%), Gaps = 11/153 (7%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSN 71
+ ++ + S +N + + + D F + P +L
Sbjct: 129 LTLLAKVVKKVIGQVSAQGNVNVTVTPQGLRIVLQDDYKQFMFSRGGSELTPFFEDLLLA 188
Query: 72 LGSWLEKHDCDFLIEGHADELG-----SRNSSIALGLRRAYAVFNYFVARGISASR-MKV 125
L ++ +I GH D + S+ S+ L RA V G+ A R ++V
Sbjct: 189 LAPVFQRVANPIIISGHTDSIPFRKKISKTSNWELSASRANVARKTLVDGGMPAERVLQV 248
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
T ++NRR +F+ A
Sbjct: 249 TGMSDRALL--NQTAPDSSENRRIELFVLTTPA 279
>gi|162450138|ref|YP_001612505.1| putative outer membrane protein [Sorangium cellulosum 'So ce 56']
gi|161160720|emb|CAN92025.1| putative outer membrane protein [Sorangium cellulosum 'So ce 56']
Length = 222
Score = 44.8 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 44/119 (36%), Gaps = 1/119 (0%)
Query: 36 NESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR 95
N S E+ V + + ++ + E I GH D +GS
Sbjct: 89 NVSIPHEEVQFETNSDVIRAPEVPKLEASLQKISEVVAKTSELGKITLFIVGHTDTVGSA 148
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
++AL +RA A+ +F RG+ + G+ P V D+ +NRR L
Sbjct: 149 EHNLALSRKRARAIAAWFKGRGVK-LSIAFEGLGESAPLVKTADQVDEPRNRRVDYILS 206
>gi|258624680|ref|ZP_05719615.1| chemotaxis LafU protein [Vibrio mimicus VM603]
gi|258583072|gb|EEW07886.1| chemotaxis LafU protein [Vibrio mimicus VM603]
Length = 315
Score = 44.4 bits (103), Expect = 0.004, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 50/153 (32%), Gaps = 11/153 (7%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSN 71
+ ++ + S +N + + + D F + P +L
Sbjct: 129 LTLLAKVVKKVIGQVSAQGNVNVTVTPQGLRIVLQDDYKQFMFSRGGSELTPFFEDLLLA 188
Query: 72 LGSWLEKHDCDFLIEGHADELG-----SRNSSIALGLRRAYAVFNYFVARGISASR-MKV 125
L ++ +I GH D + S+ S+ L RA V G+ A R ++V
Sbjct: 189 LAPVFQRVANPIIISGHTDSIPFRKKISKTSNWELSASRANVARKALVDGGMPAERVLQV 248
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
T ++NRR +F+ A
Sbjct: 249 TGMSDRALL--NQTAPDSSENRRIELFVLTTPA 279
>gi|254439271|ref|ZP_05052765.1| hypothetical protein OA307_4141 [Octadecabacter antarcticus 307]
gi|198254717|gb|EDY79031.1| hypothetical protein OA307_4141 [Octadecabacter antarcticus 307]
Length = 514
Score = 44.4 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 24/160 (15%), Positives = 53/160 (33%), Gaps = 12/160 (7%)
Query: 7 FIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFS-----SSVGDSVFFDTSSYSI 61
F+ L+A+ + D L I + + + + LQ + + F+ S +
Sbjct: 352 FVDLTAVPIPLSDQGDRLANAIVNAGSEVPLTELQRMMRLLSPRVRMSSTFRFEPGSTRL 411
Query: 62 RPADIQVLSNLGSWLEKHD---CDFLIEGHADELGSRNSSIALGLRRAYAVF----NYFV 114
+ L + + ++ G +D G ++ L RA AV
Sbjct: 412 DGQSRSNVMQLAQAIRDGRFGGRELMLVGFSDGRGLALANRDLSSARAEAVRLDLTRALG 471
Query: 115 ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ ++G+ +P NRR ++++
Sbjct: 472 GTFPENVEIDTAAFGEALPMACDDTIWGQQTNRRVELWVR 511
>gi|126461359|ref|YP_001042473.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
17029]
gi|126103023|gb|ABN75701.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17029]
Length = 701
Score = 44.4 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 8/110 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-----FLIEGHADELGSRNSSIALGLR 104
D + FDT S +I P + + L++LG + + FLIEGH D +G S++AL R
Sbjct: 584 DQITFDTGSAAIDPDEAEKLASLGQTIADMIAERPEEVFLIEGHTDAVGDAASNLALSDR 643
Query: 105 RAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA +V M V YG+E V + +NRR V L
Sbjct: 644 RAESVALALTEYFDVPPENMVVQGYGEEDLRVDSDGPE--QRNRRVAVRL 691
>gi|57505391|ref|ZP_00371319.1| probable flagellar motor protein Cj0336c [Campylobacter upsaliensis
RM3195]
gi|57016216|gb|EAL53002.1| probable flagellar motor protein Cj0336c [Campylobacter upsaliensis
RM3195]
Length = 244
Score = 44.4 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 45/119 (37%), Gaps = 5/119 (4%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSI-RPADIQVLSNLGSWLE--KHDCDFLIEGHADELGSR 95
+ Q + ++ V F +S I L + I G D S
Sbjct: 108 QSENQIALNLPSRVEFAKNSAEIVSADMQDYLKRMAQLSLSLPPQAKIEIRGFTDNSDSA 167
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
S LG RA AV NYF+ G+S ++ + SYG P + H A N R ++ K
Sbjct: 168 LRSFELGYERAKAVMNYFIDGGVSVEKLSIKSYGFNEPLL-NHASSDLANN-RVEIYFK 224
>gi|332560366|ref|ZP_08414688.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides WS8N]
gi|332278078|gb|EGJ23393.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides WS8N]
Length = 701
Score = 44.4 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 8/110 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-----FLIEGHADELGSRNSSIALGLR 104
D + FDT S +I P + + L++LG + + FLIEGH D +G S++AL R
Sbjct: 584 DQITFDTGSAAIDPDEAEKLASLGQTIADMIAERPEEVFLIEGHTDAVGDAASNLALSDR 643
Query: 105 RAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA +V M V YG+E V + +NRR V L
Sbjct: 644 RAESVALALTEYFDVPPENMVVQGYGEEDLRVDSDGPE--QRNRRVAVRL 691
>gi|221638345|ref|YP_002524607.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides KD131]
gi|221159126|gb|ACM00106.1| OmpA/MotB domain protein precursor [Rhodobacter sphaeroides KD131]
Length = 696
Score = 44.4 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 8/110 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-----FLIEGHADELGSRNSSIALGLR 104
D + FDT S +I P + + L++LG + + FLIEGH D +G S++AL R
Sbjct: 579 DQITFDTGSAAIDPDEAEKLASLGQTIADMIAERPEEVFLIEGHTDAVGDAASNLALSDR 638
Query: 105 RAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA +V M V YG+E V + +NRR V L
Sbjct: 639 RAESVALALTEYFDVPPENMVVQGYGEEDLRVDSDGPE--QRNRRVAVRL 686
>gi|220921480|ref|YP_002496781.1| OmpA/MotB domain-containing protein [Methylobacterium nodulans ORS
2060]
gi|219946086|gb|ACL56478.1| OmpA/MotB domain protein [Methylobacterium nodulans ORS 2060]
Length = 666
Score = 44.4 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 8/108 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGS-----WLEKHDCDFLIEGHADELGSRNSSIALGLR 104
D++ FD+ S+ I P + L+ + FLIEG+ D +G+ +++L R
Sbjct: 547 DTITFDSGSWQIAPDQARRLAVIAEAIGRAVQRNPQEVFLIEGYTDAVGNDVDNLSLSDR 606
Query: 105 RAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA V + + YG++ V + ++A +NRR V
Sbjct: 607 RAQEVATVLTRDFRVPPENLTTQGYGEQYLKV--NTQEASRENRRVTV 652
>gi|46398699|gb|AAS92035.1| IcmN protein [Legionella pneumophila]
Length = 166
Score = 44.4 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 45/119 (37%), Gaps = 1/119 (0%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
+S+ + + S+ S F S + A +L+ + ++ + + ++ + S
Sbjct: 44 VASVGQNYLISIPASALFADQSPRLNWASYSLLNEIAAFLKQFRKIAITVTSYSSKYVSV 103
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
AL L R+ V Y ++G+ + + G + P + N R + +
Sbjct: 104 KRERALTLARSRVVSEYLWSQGVDSRIIFTQGLGSDKPITSYTLGGDRSPNARVEITFR 162
>gi|77164352|ref|YP_342877.1| flagellar motor protein MotB [Nitrosococcus oceani ATCC 19707]
gi|254433318|ref|ZP_05046826.1| OmpA family protein [Nitrosococcus oceani AFC27]
gi|76882666|gb|ABA57347.1| OmpA/MotB [Nitrosococcus oceani ATCC 19707]
gi|207089651|gb|EDZ66922.1| OmpA family protein [Nitrosococcus oceani AFC27]
Length = 280
Score = 44.4 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 33/90 (36%), Gaps = 5/90 (5%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSIALGLRRAYAV 109
F + S L + + L+K + ++ GH D + S+ L RA +V
Sbjct: 158 FPSGSAIFSQEFKPALDKIRAILKKIEGKLIVAGHTDNMPIQTTRFRSNWELSTARAVSV 217
Query: 110 FNYFVA-RGISASRMKVTSYGKEMPSVYGH 138
+Y +A IS R + Y P
Sbjct: 218 VHYLLATHEISPRRFVLEGYADTQPLAPNE 247
>gi|54293440|ref|YP_125855.1| hypothetical protein lpl0489 [Legionella pneumophila str. Lens]
gi|53753272|emb|CAH14719.1| hypothetical protein lpl0489 [Legionella pneumophila str. Lens]
Length = 189
Score = 44.4 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 45/119 (37%), Gaps = 1/119 (0%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
+S+ + + S+ S F S + A +L+ + ++ + + ++ + S
Sbjct: 67 VASVGQNYLISIPASALFADQSPRLNWASYSLLNEIAAFLKQFRKIAITVTSYSSKYVSV 126
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
AL L R+ V Y ++G+ + + G + P + N R + +
Sbjct: 127 KRERALTLARSRVVSEYLWSQGVDSRIIFTQGLGSDKPITSYTLGGDRSPNARVEITFR 185
>gi|77462481|ref|YP_351985.1| OmpA/MotB family outer membrane protein [Rhodobacter sphaeroides
2.4.1]
gi|77386899|gb|ABA78084.1| Outer membrane protein, OmpA/MotB family [Rhodobacter sphaeroides
2.4.1]
Length = 701
Score = 44.4 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 8/110 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-----FLIEGHADELGSRNSSIALGLR 104
D + FDT S +I P + + L++LG + + FLIEGH D +G S++AL R
Sbjct: 584 DQITFDTGSAAIDPDEAEKLASLGQTIADMIAERPEEVFLIEGHTDAVGDAASNLALSDR 643
Query: 105 RAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA +V M V YG+E V + +NRR V L
Sbjct: 644 RAESVALALTEYFDVPPENMVVQGYGEEDLRVDSDGPE--QRNRRVAVRL 691
>gi|84500718|ref|ZP_00998967.1| OmpA domain protein [Oceanicola batsensis HTCC2597]
gi|84391671|gb|EAQ04003.1| OmpA domain protein [Oceanicola batsensis HTCC2597]
Length = 519
Score = 44.4 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
RM ++G+ MP NRR V+++
Sbjct: 485 RIRMTTDAFGEAMPMACDDSHWGRQVNRRVEVWIR 519
>gi|89890270|ref|ZP_01201780.1| hypothetical protein BBFL7_02242 [Flavobacteria bacterium BBFL7]
gi|89517185|gb|EAS19842.1| hypothetical protein BBFL7_02242 [Flavobacteria bacterium BBFL7]
Length = 286
Score = 44.4 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 6/105 (5%)
Query: 52 VFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
++F+T S + I+ L L + G+ D+ GS + + L R +V
Sbjct: 33 IYFETDSAILTEQSIKNLEARLIVDQTTKITAIALIGYCDDRGSVSYNQQLATNRVQSVI 92
Query: 111 NYFVARG-ISASRMKVTSYGKEMPSVYGHDEDA-YAKNRRAIVFL 153
NY R + + K+ E+P + A +NRR + +
Sbjct: 93 NYLKPRFTDNYFQQKIVG---EVPLKNRSNIKAQRYRNRRVEISV 134
Score = 39.8 bits (91), Expect = 0.12, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 41/120 (34%), Gaps = 13/120 (10%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADE-------LGSRNSSI 99
V ++V F + +R + V+ ++ + L H + I+GH
Sbjct: 171 VFNNVIFYPGRHVLRESSFPVMDSIINSLLLHKKYEIEIQGHICCLSPGVYGRDMDTGQW 230
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
L RA V + V G++A R+ +RR + + G R +
Sbjct: 231 NLSKARAEQVKRFLVKYGVAADRLTTIGK-----QANFKTGKGDFYDRRVEIHITGIRED 285
>gi|46398703|gb|AAS92037.1| IcmN protein [Legionella pneumophila]
Length = 165
Score = 44.4 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 45/119 (37%), Gaps = 1/119 (0%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
+S+ + + S+ S F S + A +L+ + ++ + + ++ + S
Sbjct: 43 VASVGQNYLISIPASALFADQSPRLNWASYSLLNEIAAFLKQFRKIAITVTSYSSKYVSV 102
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
AL L R+ V Y ++G+ + + G + P + N R + +
Sbjct: 103 KRERALTLARSRVVSEYLWSQGVDSRIIFTQGLGSDKPITSYTLGGDRSPNARVEITFR 161
>gi|46398709|gb|AAS92040.1| IcmN protein [Legionella pneumophila]
Length = 175
Score = 44.4 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 45/119 (37%), Gaps = 1/119 (0%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
+S+ + + S+ S F S + A +L+ + ++ + + ++ + S
Sbjct: 53 VASVGQNYLISIPASALFADQSPRLNWASYSLLNEIAAFLKQFRKIAITVTSYSSKYVSV 112
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
AL L R+ V Y ++G+ + + G + P + N R + +
Sbjct: 113 KRERALTLARSRVVSEYLWSQGVDSRIIFTQGLGSDKPITSYTLGGDRSPNARVEITFR 171
>gi|52840692|ref|YP_094491.1| LphA (DotK) [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|148360936|ref|YP_001252143.1| hypothetical protein LPC_2896 [Legionella pneumophila str. Corby]
gi|296105998|ref|YP_003617698.1| LphA (DotK) [Legionella pneumophila 2300/99 Alcoy]
gi|2897615|emb|CAA75327.1| LphA protein [Legionella pneumophila]
gi|52627803|gb|AAU26544.1| LphA (DotK) [Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|148282709|gb|ABQ56797.1| LphA (DotK) [Legionella pneumophila str. Corby]
gi|295647899|gb|ADG23746.1| LphA (DotK) [Legionella pneumophila 2300/99 Alcoy]
gi|307609255|emb|CBW98722.1| Dot/Icm secretion system protein [Legionella pneumophila 130b]
Length = 189
Score = 44.4 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 45/119 (37%), Gaps = 1/119 (0%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
+S+ + + S+ S F S + A +L+ + ++ + + ++ + S
Sbjct: 67 VASVGQNYLISIPASALFADQSPRLNWASYSLLNEIAAFLKQFRKIAITVTSYSSKYVSV 126
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
AL L R+ V Y ++G+ + + G + P + N R + +
Sbjct: 127 KRERALTLARSRVVSEYLWSQGVDSRIIFTQGLGSDKPITSYTLGGDRSPNARVEITFR 185
>gi|218557186|ref|YP_002390099.1| hypothetical protein ECS88_0265 [Escherichia coli S88]
gi|218363955|emb|CAR01620.1| flagellar system protein [Escherichia coli S88]
Length = 296
Score = 44.4 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 54/149 (36%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 110 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKT 169
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L L+ D +I GH D + + ++ L RA + G+ +++
Sbjct: 170 LLVELAPVLDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPENKVM 229
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 230 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 257
>gi|91224838|ref|ZP_01260098.1| hypothetical protein V12G01_01555 [Vibrio alginolyticus 12G01]
gi|91190384|gb|EAS76653.1| hypothetical protein V12G01_01555 [Vibrio alginolyticus 12G01]
Length = 1581
Score = 44.4 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 37/86 (43%), Gaps = 10/86 (11%)
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPS- 134
+ + IEGHA ++G+ +++ + RA + R+ V ++G+ P
Sbjct: 637 NEPNLRVEIEGHACQVGTEKANMQVSAERAEYAKKLLMKEFPVFEGRVSVAAFGESKPVY 696
Query: 135 -------VYGHDEDAYAKNRRAIVFL 153
V ++ + +NRR ++ +
Sbjct: 697 VPKQGEKVDRNNPNLR-QNRRVVIRI 721
>gi|84684610|ref|ZP_01012511.1| OmpA domain protein [Maritimibacter alkaliphilus HTCC2654]
gi|84667589|gb|EAQ14058.1| OmpA domain protein [Rhodobacterales bacterium HTCC2654]
Length = 514
Score = 44.4 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 6/32 (18%), Positives = 16/32 (50%)
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
++ ++G+ +P + NRR V+++
Sbjct: 483 IEAEAFGEALPMACDDTDWGRRINRRVEVWVE 514
>gi|307295611|ref|ZP_07575447.1| OmpA/MotB domain protein [Sphingobium chlorophenolicum L-1]
gi|306878650|gb|EFN09870.1| OmpA/MotB domain protein [Sphingobium chlorophenolicum L-1]
Length = 234
Score = 44.4 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 41/102 (40%), Gaps = 1/102 (0%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+FFD + + P + +S L + F + G+ D GS + L LRRA V
Sbjct: 129 IFFDWNMDAPLPEGVGTISTLTQTAAQCGWTRFGVTGYTDTSGSNRYNDGLSLRRARNVA 188
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ GI+ M VT G+ + D NRR +
Sbjct: 189 SLMSQGGIATDAMTVTGLGETQLKIETADGVREPMNRRVEIT 230
>gi|54296482|ref|YP_122851.1| hypothetical protein lpp0513 [Legionella pneumophila str. Paris]
gi|53750267|emb|CAH11661.1| hypothetical protein lpp0513 [Legionella pneumophila str. Paris]
Length = 189
Score = 44.4 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 45/119 (37%), Gaps = 1/119 (0%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
+S+ + + S+ S F S + A +L+ + ++ + + ++ + S
Sbjct: 67 VASVGQNYLISIPASALFADQSPRLNWASYSLLNEVAAFLKQFRKIAITVTSYSSKYVSV 126
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
AL L R+ V Y ++G+ + + G + P + N R + +
Sbjct: 127 KRERALTLARSRVVSEYLWSQGVDSRIIFTQGLGSDKPITSYTLGGDRSPNARVEITFR 185
>gi|312884825|ref|ZP_07744517.1| Flagellar motor rotation protein MotB [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309367477|gb|EFP95037.1| Flagellar motor rotation protein MotB [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 331
Score = 44.4 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 52/156 (33%), Gaps = 17/156 (10%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDS---VFFDTSSYSIRPADIQVLSN 71
+ +++ + TK + +N + + + D F + P +L
Sbjct: 129 LAALAKVIEEATKQNGAQGNVNITVTPQGLRVVLQDDEKQTMFSRGGSKLTPFFEDLLVA 188
Query: 72 LGSWLEKHDCDFLIEGHADE-----LGSRNSSIALGLRRAYAVFNYFVARGISASR-MKV 125
+ EK +I GH D + S+ L RA A V G+ + R ++V
Sbjct: 189 IAPIFEKVANPIIISGHTDSIRYKSRFNIKSNWELSTSRANAARYTLVQAGMPSERVLQV 248
Query: 126 TSYGKE---MPSVYGHDEDAYAKNRRAIVFLKGCRA 158
T P E NRR +F+ A
Sbjct: 249 TGMSDRALLNPQAPKSSE-----NRRIELFVLTTPA 279
>gi|85715414|ref|ZP_01046396.1| OmpA/MotB [Nitrobacter sp. Nb-311A]
gi|85697835|gb|EAQ35710.1| OmpA/MotB [Nitrobacter sp. Nb-311A]
Length = 276
Score = 44.4 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 26/152 (17%), Positives = 44/152 (28%), Gaps = 10/152 (6%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
A+ S+ +++ + +E + + D F S
Sbjct: 115 FALASASLRQALQDMPELTELSKHIMFEETKEGLNLEIVDQDGRSMFAEGSKEPYERTRM 174
Query: 68 VLSNLGSWLEKHDCDFLIEGHADE----LGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
++ L + L I GH + S L RA V G+ S +
Sbjct: 175 LIGKLAAPLTATPFRISITGHTASNFVPMRSDYDGFDLSADRANVVRQILEQEGLPPSHI 234
Query: 124 KVT-SYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
MP D+ + A NRR + L
Sbjct: 235 FAVSGKSDSMPLFP--DDPSLAANRRVTITLM 264
>gi|46398711|gb|AAS92041.1| IcmN protein [Legionella pneumophila]
Length = 165
Score = 44.4 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 45/119 (37%), Gaps = 1/119 (0%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
+S+ + + S+ S F S + A +L+ + ++ + + ++ + S
Sbjct: 43 VASVGQNYXISIPASALFADQSPRLNWASYSLLNEIAAFLKQFRKIAITVTSYSSKYVSV 102
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
AL L R+ V Y ++G+ + + G + P + N R + +
Sbjct: 103 KRERALTLARSRVVSEYLWSQGVDSRIIFTQGLGSDKPITSYTLGGDRSPNARVEITFR 161
>gi|222824332|ref|YP_002575906.1| flagellar motor component MotB [Campylobacter lari RM2100]
gi|222539553|gb|ACM64654.1| flagellar motor component MotB [Campylobacter lari RM2100]
Length = 244
Score = 44.4 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 52/118 (44%), Gaps = 7/118 (5%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQV-LSNLGSWLEKH--DCDFLIEGHAD-ELGSRN 96
+ ++ V F +S I AD+Q L + L++ + G+ D
Sbjct: 110 ENNIVLNLPARVEFARASVEINSADVQDFLKRISEVLKRMPKQAQIELRGYTDASDKDPK 169
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ L +RA V +Y +ARGI+ +++ V S+G+ P +++ N R +++
Sbjct: 170 RNFDLASKRAQVVADYLIARGINPAQLIVVSFGENYPLSANKEDE---INNRVEFYIR 224
>gi|256830501|ref|YP_003159229.1| OmpA/MotB domain-containing protein [Desulfomicrobium baculatum DSM
4028]
gi|256579677|gb|ACU90813.1| OmpA/MotB domain protein [Desulfomicrobium baculatum DSM 4028]
Length = 260
Score = 44.4 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 43/120 (35%), Gaps = 13/120 (10%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE-------------LG 93
S+G F S + +L L + + + GH E
Sbjct: 98 SIGADALFAPGSADLTAGGRSLLDRLRPVVMESSHPLGLSGHTSEGMDEFGPDYLAKPWI 157
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ S L L R AV+ YF+ G+ ++++ ++G+ P + NRR + L
Sbjct: 158 KVDFSWELSLARVMAVYKYFIETGVEPEKLRLEAFGRFRPRLTTEAPGERQTNRRVEITL 217
>gi|2895292|gb|AAC38192.1| DotK [Legionella pneumophila]
Length = 134
Score = 44.4 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 45/119 (37%), Gaps = 1/119 (0%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
+S+ + + S+ S F S + A +L+ + ++ + + ++ + S
Sbjct: 12 VASVGQNYLISIPASALFADQSPRLNWASYSLLNEIAAFLKQFRKIAITVTSYSSKYVSV 71
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
AL L R+ V Y ++G+ + + G + P + N R + +
Sbjct: 72 KRERALTLARSRVVSEYLWSQGVDSRIIFTQGLGSDKPITSYTLGGDRSPNARVEITFR 130
>gi|39937736|ref|NP_950012.1| outer membrane protein OprF [Rhodopseudomonas palustris CGA009]
gi|39651596|emb|CAE30118.1| possible outer membrane protein OprF (AF117972) [Rhodopseudomonas
palustris CGA009]
Length = 216
Score = 44.4 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 41/105 (39%), Gaps = 6/105 (5%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGLRRAYA 108
+ F+ +S +I + LG L D F++ GH D +GS + + L RRA
Sbjct: 104 ITFEYNSANISRQAAPAVEALGKALSSPDLKGGTFVVAGHTDSVGSDSFNQDLSERRADT 163
Query: 109 VFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ V + A + YG+ H + NRR V
Sbjct: 164 IKRVLVEKYGIAGADLVTVGYGESRLKDPAHPDSG--INRRVQVV 206
>gi|300774087|ref|ZP_07083956.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33861]
gi|300760258|gb|EFK57085.1| OmpA/MotB family protein [Sphingobacterium spiritivorum ATCC 33861]
Length = 446
Score = 44.4 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYA 108
D++ F+T + I PA L NL + L+ I G+ D+ G + + L L RA A
Sbjct: 339 DNLNFETGTAKILPASRDQLLNLAAILKVFPDAKVKIGGYTDKTGDESFNKKLSLDRANA 398
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA-YAKNRRAIVFLK 154
V + +G+ A YG E+ ++ K+RR V ++
Sbjct: 399 VKVFLDEQGLGAQVAGTEGYGSEIARYPADAPESDRIKDRRVSVSVR 445
>gi|91223190|ref|ZP_01258456.1| chemotaxis LafU protein [Vibrio alginolyticus 12G01]
gi|269967120|ref|ZP_06181187.1| chemotaxis LafU protein [Vibrio alginolyticus 40B]
gi|91192003|gb|EAS78266.1| chemotaxis LafU protein [Vibrio alginolyticus 12G01]
gi|269828257|gb|EEZ82524.1| chemotaxis LafU protein [Vibrio alginolyticus 40B]
Length = 331
Score = 44.4 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 31/153 (20%), Positives = 54/153 (35%), Gaps = 11/153 (7%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSN 71
+ +++ + T + +N + + + D F + P +L
Sbjct: 130 LAALAKVIEQMTAQINAQGNVNVTVTPQGLRIVLQDDYKQHMFSRGGAELTPFFEDLLLA 189
Query: 72 LGSWLEKHDCDFLIEGHADELGS-----RNSSIALGLRRAYAVFNYFVARGISASR-MKV 125
L + + +I GH D + R S+ AL RA N V G+ R M+V
Sbjct: 190 LAPVFHRVNNPLIISGHTDAIPFKKRFGRQSNWALSASRADVARNTLVEGGMPDDRVMQV 249
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
T DE ++NRR +F+ A
Sbjct: 250 TGMSDRALL--NPDEPDSSENRRIELFVLTTPA 280
>gi|331681649|ref|ZP_08382282.1| MbhA protein [Escherichia coli H299]
gi|331080851|gb|EGI52016.1| MbhA protein [Escherichia coli H299]
Length = 261
Score = 44.4 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 51/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 75 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKT 134
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D + GH D + + ++ L RA + G+ ++
Sbjct: 135 LLVELAPVFDSLDNKIIFTGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 194
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 195 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 222
>gi|296122828|ref|YP_003630606.1| OmpA/MotB domain protein [Planctomyces limnophilus DSM 3776]
gi|296015168|gb|ADG68407.1| OmpA/MotB domain protein [Planctomyces limnophilus DSM 3776]
Length = 296
Score = 44.4 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 6/116 (5%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD-----ELGSRNSSIAL 101
+VG V F +Y++ + I L L L I GHA + ++ L
Sbjct: 81 NVGTMVLFAEKAYALDESAINQLEALLPDLLGKPNKIEIRGHASRRERADTQTKEDPWQL 140
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPS-VYGHDEDAYAKNRRAIVFLKGC 156
R+ AV ++ V++G+ R++++ G E P D + A+N R VFL G
Sbjct: 141 SWMRSQAVKDFLVSKGVELGRLRLSQDGAEEPYSAKKLDAEHQAQNARVEVFLIGE 196
>gi|13446371|gb|AAK20927.1| LafU [Aeromonas hydrophila]
Length = 315
Score = 44.4 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 21/112 (18%), Positives = 39/112 (34%), Gaps = 4/112 (3%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG---SRNSSIALGLRRA 106
+ + S I P +L L ++ + +I GH D S+ L RA
Sbjct: 177 EREMYSRGSARISPFFRHMLMALAPIFQRVENRVMISGHTDSTPFAGDNYSNWELSSDRA 236
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
+A G+ R+ + + D ++NRR + + +A
Sbjct: 237 MMARRVLLAGGMPPERVGQVAAMSDTMLENTADPRG-SQNRRIELLVMTSQA 287
>gi|126732885|ref|ZP_01748676.1| OmpA domain protein [Sagittula stellata E-37]
gi|126706661|gb|EBA05735.1| OmpA domain protein [Sagittula stellata E-37]
Length = 518
Score = 44.0 bits (102), Expect = 0.006, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 42/108 (38%), Gaps = 7/108 (6%)
Query: 54 FDTSSYSIRPADIQVLSNLGSW---LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
F+T S + + L L G +D G ++++A+ RRA AV
Sbjct: 411 FETGSSRLDAQSRSNVLQLAHDLEAGRYDGRKLLFVGFSDGAGPADANLAIARRRAEAVK 470
Query: 111 NYFV----ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ +++ + + ++G+ MP NRR V++K
Sbjct: 471 SAVEVTAETADLTSFELALDAFGEAMPMACDDTSWGRQVNRRVEVWVK 518
>gi|281423558|ref|ZP_06254471.1| putative peptidoglycan-associated lipoprotein [Prevotella oris
F0302]
gi|281402378|gb|EFB33209.1| putative peptidoglycan-associated lipoprotein [Prevotella oris
F0302]
Length = 425
Score = 44.0 bits (102), Expect = 0.006, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 56/128 (43%), Gaps = 7/128 (5%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFL 84
+K + + E ++ +V+F +S I + + + L+ + + +
Sbjct: 301 SKTTERSVSEVSVAAAESVATVDFPTVYFAFNSARISSKEETKMQQILHLLQDNPKLNII 360
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+ G D +GS ++ L +RRA A+ + RGI+A R+K G++ +E A
Sbjct: 361 VTGWCDTVGSDAVNLRLSVRRAKALKTWLTTRGINAVRIKTAGKGRDF------NEKNAA 414
Query: 145 KNRRAIVF 152
K RR+
Sbjct: 415 KARRSETV 422
>gi|189466239|ref|ZP_03015024.1| hypothetical protein BACINT_02610 [Bacteroides intestinalis DSM
17393]
gi|189434503|gb|EDV03488.1| hypothetical protein BACINT_02610 [Bacteroides intestinalis DSM
17393]
Length = 224
Score = 44.0 bits (102), Expect = 0.006, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 52/134 (38%), Gaps = 7/134 (5%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ + + + V + + L + + F +S ++ L L L++
Sbjct: 80 AAEAAKIEGAQVEKVTDTNGLAA-VKVTFESGILFGFNSSALSNTSKASLRELAQILKED 138
Query: 80 DCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYG 137
I GH D++G+ +++ + RAY V NY G+S ++ +V G
Sbjct: 139 PTTDIAIVGHTDKVGTYEANMKVSKDRAYTVENYLQDCGVSPAQFKQVEGVGYNQ-YDDS 197
Query: 138 HDEDAYAKNRRAIV 151
++NRR +
Sbjct: 198 MTA---SQNRRVDI 208
>gi|227539888|ref|ZP_03969937.1| OmpA/MotB [Sphingobacterium spiritivorum ATCC 33300]
gi|227240166|gb|EEI90181.1| OmpA/MotB [Sphingobacterium spiritivorum ATCC 33300]
Length = 446
Score = 44.0 bits (102), Expect = 0.006, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYA 108
D++ F+T + I PA L NL + L+ I G+ D+ G + L L RA A
Sbjct: 339 DNLNFETGTAKILPASRDQLLNLAAILKVFPDAKVKIGGYTDKTGDEAFNKKLSLDRANA 398
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA-YAKNRRAIVFLK 154
V + +G+ A YG E+ ++ K+RR V ++
Sbjct: 399 VKVFLDEQGLGAQVAGTEGYGSEIARYPADAPESDRIKDRRVSVSVR 445
>gi|316931816|ref|YP_004106798.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
DX-1]
gi|315599530|gb|ADU42065.1| OmpA/MotB domain protein [Rhodopseudomonas palustris DX-1]
Length = 334
Score = 44.0 bits (102), Expect = 0.006, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 54/128 (42%), Gaps = 8/128 (6%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-----WLEKHDCDFL 84
+ D + +++++ S +++ FDT S+ I P L + FL
Sbjct: 184 TMDEIRYSPAVRQRMPSIDLNTINFDTGSWDIPPDQAAKLQVIADGLNRAIQRNPREVFL 243
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAY 143
IEGH D +G+ +++L RRA + + + YG++ V + + A
Sbjct: 244 IEGHTDAVGNDTDNLSLSDRRAESAAALLTQQFGVPAENLTSQGYGEQYLKV--NTQAAE 301
Query: 144 AKNRRAIV 151
+NRR +
Sbjct: 302 RQNRRVTI 309
>gi|170741247|ref|YP_001769902.1| OmpA/MotB domain-containing protein [Methylobacterium sp. 4-46]
gi|168195521|gb|ACA17468.1| OmpA/MotB domain protein [Methylobacterium sp. 4-46]
Length = 277
Score = 44.0 bits (102), Expect = 0.006, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 39/151 (25%), Gaps = 10/151 (6%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
+ M S+ I+ + S+ D F S Q
Sbjct: 115 FGLAMASLRQALQDLPDIAELSKNVLIHETARGLDVSLVDQDGRSMFPDGSTRPNDRTRQ 174
Query: 68 VLSNLGSWLEKHDCDFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRM 123
VL L + + I G+ L RA +V + G+ R
Sbjct: 175 VLERLAPAIRRMSNKIAISGYTAATRPGLRAPAPPWELSAGRAISVREILASNGVPDERF 234
Query: 124 KVT-SYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V P + A NRR + L
Sbjct: 235 TVVSGKADTEPLFP-DNPYI-AANRRVTITL 263
>gi|294142661|ref|YP_003558639.1| OmpA family protein [Shewanella violacea DSS12]
gi|293329130|dbj|BAJ03861.1| OmpA family protein [Shewanella violacea DSS12]
Length = 334
Score = 44.0 bits (102), Expect = 0.006, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 47/135 (34%), Gaps = 3/135 (2%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
GI + V+ + E +V F S + L + + +
Sbjct: 191 GIKPAVVVAAVVAPVIAPEPVYETKVEQKSTAVLFGFDSSELSTTAQAKLDEVVRVSKLN 250
Query: 80 DC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
D L+ G AD G + L RA V +Y V+ G+ ++ + G++
Sbjct: 251 DNDTILLIGQADSRGDAGYNQKLSEARAQHVEDYLVSHGVEVQQLGHQASGEQDSHAS-- 308
Query: 139 DEDAYAKNRRAIVFL 153
A+ RR I+ L
Sbjct: 309 SSQDRAQERRVIITL 323
>gi|330501121|ref|YP_004377990.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
gi|328915407|gb|AEB56238.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina NK-01]
Length = 313
Score = 44.0 bits (102), Expect = 0.006, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 49/138 (35%), Gaps = 11/138 (7%)
Query: 30 SPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ + + + + D F+ S + P +L L L + + +I
Sbjct: 149 DAEANIEVQVVPQGLRILIKDDAQRFMFNRGSSHLNPHFETLLRRLAGILGRVENHLIIS 208
Query: 87 GHADELGSR-----NSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDE 140
GH D + R ++ L RA N V G+ ++V + MP + E
Sbjct: 209 GHTDSMPYRGVVGGYNNWNLSGDRALRARNVLVEAGLPTGNVLQVAAQADGMPLLPNDPE 268
Query: 141 DAYAKNRRAIVFLKGCRA 158
+ NRR + L +A
Sbjct: 269 NG--ANRRIELLLLTSQA 284
>gi|325498393|gb|EGC96252.1| hypothetical protein ECD227_2490 [Escherichia fergusonii ECD227]
Length = 256
Score = 44.0 bits (102), Expect = 0.006, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 51/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 70 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKT 129
Query: 68 VLSNLGSWLEKHDCDFLIEGHADELGS---RNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + ++ L RA + G+ ++
Sbjct: 130 LLVELAPVFDSLDNKIIITGHTDAMAYKSNIYNNWNLSGDRALSARRVLEDAGMPEDKVM 189
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + + NRR + +
Sbjct: 190 QVSAMADQMLLDAKNPQS-SGNRRIEIMV 217
>gi|315287740|gb|EFU47143.1| OmpA family protein [Escherichia coli MS 110-3]
Length = 211
Score = 44.0 bits (102), Expect = 0.006, Method: Composition-based stats.
Identities = 26/149 (17%), Positives = 54/149 (36%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 25 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKT 84
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L L+ D +I GH D + + ++ L RA + G+ +++
Sbjct: 85 LLVELAPVLDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPENKVM 144
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 145 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 172
>gi|307302740|ref|ZP_07582496.1| OmpA/MotB domain protein [Sinorhizobium meliloti BL225C]
gi|306903104|gb|EFN33695.1| OmpA/MotB domain protein [Sinorhizobium meliloti BL225C]
Length = 633
Score = 44.0 bits (102), Expect = 0.006, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 8/108 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWL-----EKHDCDFLIEGHADELGSRNSSIALGLR 104
D++ F T S + + + + N+ + + F IEGH D +G+ S++ L
Sbjct: 515 DTITFATGSAEVSMSQAKTMRNVAEAMNKVLEKDPGETFFIEGHTDAVGADQSNLVLSDE 574
Query: 105 RAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA +V GI A + YG+ + + +NRR +
Sbjct: 575 RAESVAVLLTEVYGIPAENLVTQGYGERFLKIRTDGPE--QENRRVTI 620
>gi|213950522|gb|ACJ54534.1| outer membrane protein A [Haemophilus parasuis]
Length = 305
Score = 44.0 bits (102), Expect = 0.006, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD +++PA Q L + + + + G+ D +G +++ L
Sbjct: 216 AFSSDVLFDFGKANLKPAAAQTLDAVHTEIVNLGLANPAVQVNGYTDRIGKDAANLTLSQ 275
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMP 133
+RA V NY V++G++ + + YG+ P
Sbjct: 276 KRAETVANYIVSKGVNPANVTAVGYGEANP 305
>gi|46398691|gb|AAS92031.1| IcmN protein [Legionella pneumophila]
Length = 189
Score = 44.0 bits (102), Expect = 0.006, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 45/119 (37%), Gaps = 1/119 (0%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
+S+ + + S+ S F S + A +L+ + ++ + + ++ + S
Sbjct: 67 VASVGQNYLISIPASALFADQSPRLNWASYSLLNEIAAFLKQFRKIAITVTSYSSKYVSV 126
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
AL L R+ V Y ++G+ + + G + P + N R + +
Sbjct: 127 KRERALTLARSRVVSEYLWSQGVDSRIIFTQGLGSDKPITSYTLGGDRSPNARVEITFR 185
>gi|46398693|gb|AAS92032.1| IcmN protein [Legionella pneumophila]
Length = 145
Score = 44.0 bits (102), Expect = 0.006, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 45/119 (37%), Gaps = 1/119 (0%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
+S+ + + S+ S F S + A +L+ + ++ + + ++ + S
Sbjct: 23 VASVGQNYLISIPASALFADQSPRLNWASYSLLNEIAAFLKQFRKIAITVTSYSSKYVSV 82
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
AL L R+ V Y ++G+ + + G + P + N R + +
Sbjct: 83 KRERALTLARSRVVSEYLWSQGVDSRIIFTQGLGSDKPITSYTLGGDRSPNARVEITFR 141
>gi|226323415|ref|ZP_03798933.1| hypothetical protein COPCOM_01189 [Coprococcus comes ATCC 27758]
gi|225208099|gb|EEG90453.1| hypothetical protein COPCOM_01189 [Coprococcus comes ATCC 27758]
Length = 539
Score = 44.0 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 39/116 (33%), Gaps = 10/116 (8%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNL---------GSWLEKHDCDFLIEGHADELGSRN 96
+ ++V F + L + + ++EG+ D G
Sbjct: 417 VQMDNNVLFAWDKADLSEEGKAYLDQFLAAYVPVISSAIEDGKVSTIVVEGYTDSAGDEA 476
Query: 97 SSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
++ L RA V +Y A + ++V G + G ++ A +RR V
Sbjct: 477 YNLKLSQERAKTVADYIKAGYPELTNAIEVVGNGANNLILDGEGKEDAAASRRVEV 532
>gi|170767971|ref|ZP_02902424.1| lateral flagellar motor protein B [Escherichia albertii TW07627]
gi|170123459|gb|EDS92390.1| lateral flagellar motor protein B [Escherichia albertii TW07627]
Length = 222
Score = 44.0 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 42 SATELGELATSINTIARHAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAKIMPFFKT 101
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 102 LLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEDAGMPEDKVM 161
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 162 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 189
>gi|15965621|ref|NP_385974.1| hypothetical protein SMc00141 [Sinorhizobium meliloti 1021]
gi|15074802|emb|CAC46447.1| Hypothetical protein SMc00141 [Sinorhizobium meliloti 1021]
Length = 671
Score = 44.0 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 8/108 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWL-----EKHDCDFLIEGHADELGSRNSSIALGLR 104
D++ F T S + + + + N+ + + F IEGH D +G+ S++ L
Sbjct: 553 DTITFATGSAEVSMSQAKTMRNVAEAMNKVLEKDPGETFFIEGHTDAVGADQSNLVLSDE 612
Query: 105 RAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA +V GI A + YG+ + + +NRR +
Sbjct: 613 RAESVAVLLTEVYGIPAENLVTQGYGERFLKIRTDGPE--QENRRVTI 658
>gi|61655683|gb|AAX49328.1| PlpD [Mannheimia haemolytica]
Length = 217
Score = 44.0 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 40/100 (40%), Gaps = 2/100 (2%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRR 105
++ FD ++ +V+ N+ L+ + G+ D LGS ++ L RR
Sbjct: 114 TLTGDFLFDFDKATLTTKGKEVVDNVAQQLKASKAQQVKVAGYTDRLGSAAYNLDLSQRR 173
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ V V +G++A +++ YGK E
Sbjct: 174 SNTVKARLVQQGVTA-QIEAVGYGKANQVKACDGETGQEL 212
>gi|90421593|ref|YP_529963.1| OmpA/MotB [Rhodopseudomonas palustris BisB18]
gi|90103607|gb|ABD85644.1| OmpA/MotB [Rhodopseudomonas palustris BisB18]
Length = 617
Score = 44.0 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 8/108 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-----FLIEGHADELGSRNSSIALGLR 104
D++ F+ S+ I P L + L K FLIEGH D +G+ +++L R
Sbjct: 487 DTITFELGSWEIPPDQAAKLQAIADGLNKSIARNPREVFLIEGHTDAVGNDTDNLSLSDR 546
Query: 105 RAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA A + + YG++ V + +NRR V
Sbjct: 547 RAEAAAQLLTQQFGVPAENLTSQGYGEQYLKVPTQAPE--RQNRRVTV 592
>gi|90578362|ref|ZP_01234173.1| ABC-type nitrate/sulfonate/bicarbonate transport system,
periplasmic components [Vibrio angustum S14]
gi|90441448|gb|EAS66628.1| ABC-type nitrate/sulfonate/bicarbonate transport system,
periplasmic components [Vibrio angustum S14]
Length = 508
Score = 44.0 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 45/110 (40%), Gaps = 5/110 (4%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYA 108
V F + S + P Q L+ L + L+EGH G + +I L +RA A
Sbjct: 395 RPVIFSSGSERLTPNGQQQLNLTAESLSHYPNFRILVEGHTGLRGDKALNIELSAKRAKA 454
Query: 109 VFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYA-KNR--RAIVFLK 154
V +Y V + G ASR+ G + P + E NR R + L
Sbjct: 455 VKSYLVNQLGFEASRIHAVGKGSDEPLIQLSGESQRRYANRLMRVEIALM 504
>gi|84387079|ref|ZP_00990102.1| putative outer membrane protein [Vibrio splendidus 12B01]
gi|84378154|gb|EAP95014.1| putative outer membrane protein [Vibrio splendidus 12B01]
Length = 205
Score = 44.0 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 52/109 (47%), Gaps = 2/109 (1%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+ F +S I P + + + ++L++++ ++G+A ++G+ ++ L RA V
Sbjct: 85 ILFANNSTEINPVFLGQIRQMAAFLKRYEGTSIELQGYASKVGNAKHNLKLSKERASHVR 144
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
++ GI SR+ + +G + +A +R+ + + G + N
Sbjct: 145 RALISNGIQPSRVNIVGHGDSE-FSSDDSQVNHALHRKVVASVVGFKGN 192
>gi|328470528|gb|EGF41439.1| hypothetical protein VP10329_07007 [Vibrio parahaemolyticus 10329]
Length = 187
Score = 44.0 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 52/141 (36%), Gaps = 4/141 (2%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
++ + N D I + + + S + + Y + +
Sbjct: 47 LASVINEDLSIVQDEKIEKVEATNATESCTFDKNSMSLVLHYDTNEHYLTNVHKQAISKY 106
Query: 78 ----KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
D L+EGH D++GS+ + +L LRRA Y +R+ ++G+ P
Sbjct: 107 LELVNEDKRILVEGHTDDVGSQAYNKSLSLRRASTASKYLKKDLELGNRIVEKAFGESAP 166
Query: 134 SVYGHDEDAYAKNRRAIVFLK 154
++ NRR ++ ++
Sbjct: 167 ICKVNENKLSGCNRRVVLTIE 187
>gi|27378912|ref|NP_770441.1| chemotaxis protein [Bradyrhizobium japonicum USDA 110]
gi|27352062|dbj|BAC49066.1| pomB [Bradyrhizobium japonicum USDA 110]
Length = 276
Score = 44.0 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 26/152 (17%), Positives = 46/152 (30%), Gaps = 10/152 (6%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
A+ S+ +++ + ++ + + D F S +
Sbjct: 115 FALAAASLRQALQDMPELTEMSKHIMFEETKQGLNLEIVDQDGRSMFADGSKVPYDRTRR 174
Query: 68 VLSNLGSWLEKHDCDFLIEGHADE----LGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
++ L L+ I GH S + L RA AV G+ AS +
Sbjct: 175 LVEKLAIPLKATPLRVSIAGHTAAGFVPTRSDYGAFDLSADRANAVRQILEREGLPASHI 234
Query: 124 KVT-SYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
P D+ + A NRR + L
Sbjct: 235 FAVSGKADTQPLFP--DDPSLAANRRVTITLM 264
>gi|254228819|ref|ZP_04922242.1| Flagellar motor protein [Vibrio sp. Ex25]
gi|262396462|ref|YP_003288315.1| Flagellar motor rotation protein MotB [Vibrio sp. Ex25]
gi|151938766|gb|EDN57601.1| Flagellar motor protein [Vibrio sp. Ex25]
gi|262340056|gb|ACY53850.1| Flagellar motor rotation protein MotB [Vibrio sp. Ex25]
Length = 330
Score = 44.0 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 31/153 (20%), Positives = 55/153 (35%), Gaps = 11/153 (7%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSN 71
+ +++ + T + +N + + + D F + P +L
Sbjct: 129 LAALAKVIERMTAQINAQGNVNVTVTPQGLRIVLQDDYKQHMFSRGGAELTPFFEDLLLA 188
Query: 72 LGSWLEKHDCDFLIEGHADELGS-----RNSSIALGLRRAYAVFNYFVARGISASR-MKV 125
L ++ + +I GH D + R S+ AL RA N V G+ R M+V
Sbjct: 189 LAPVFQRVNNPLIISGHTDAIPFKKRFGRQSNWALSASRADVARNTLVEGGMPDDRVMQV 248
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
T DE ++NRR +F+ A
Sbjct: 249 TGMSDRALL--NPDEPDSSENRRIELFVLTTPA 279
>gi|254447506|ref|ZP_05060972.1| OmpA family protein [gamma proteobacterium HTCC5015]
gi|198262849|gb|EDY87128.1| OmpA family protein [gamma proteobacterium HTCC5015]
Length = 1980
Score = 44.0 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 35/110 (31%), Gaps = 8/110 (7%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD-------ELGSRNSSIALGLRR 105
F S+ L ++ + GHAD + AL L R
Sbjct: 474 FESFSAELGEEDQQHFDQILSQVDKQRVQRITVIGHADTRPIRARSQSIYADNQALSLAR 533
Query: 106 AYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
A Y R A ++ V G P + G + A NRR + ++
Sbjct: 534 ANVAAEYARQRLGLEADKVDVLGKGDSFPLLKGRSGEDNAANRRVEIVIE 583
>gi|116250495|ref|YP_766333.1| flagellar motor protein MotB [Rhizobium leguminosarum bv. viciae
3841]
gi|115255143|emb|CAK06217.1| putative motility protein [Rhizobium leguminosarum bv. viciae 3841]
Length = 443
Score = 44.0 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 49/130 (37%), Gaps = 7/130 (5%)
Query: 35 LNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
L ++ + S+ D F+ S R + + +G+ L++ I GH D
Sbjct: 315 LTVTASEGGLLVSISDQTDDSMFNIGSAVPRQEMVLAMEKIGAILKERGGAVAIRGHTDG 374
Query: 92 LG---SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
++N + L + RA + + V G+ R+ S + D A NRR
Sbjct: 375 RQYKGTQNENWRLSMDRAQSAYYMLVRGGLDEKRISQVSGFADRRLKLPSDPFN-ATNRR 433
Query: 149 AIVFLKGCRA 158
+ ++ +
Sbjct: 434 IEILVQADQG 443
>gi|167762473|ref|ZP_02434600.1| hypothetical protein BACSTE_00828 [Bacteroides stercoris ATCC
43183]
gi|167699579|gb|EDS16158.1| hypothetical protein BACSTE_00828 [Bacteroides stercoris ATCC
43183]
Length = 224
Score = 44.0 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 61/137 (44%), Gaps = 11/137 (8%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ + + + V + ++L + + + F +S ++ L +L L++
Sbjct: 80 AAEAAKIEGAQVEMVKDANNL-DAVKVTFDSGILFTFNSSTLSNDAKASLRDLAKILKED 138
Query: 80 DCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYG 137
I GH D++G+ +++ + RAYAV NY G+S S+ +V G
Sbjct: 139 TTTDIAIIGHTDKVGTYEANMKVSKNRAYAVENYLQDCGVSPSQFKQVEGVGY------N 192
Query: 138 HDEDAYA--KNRRAIVF 152
+++ + +NRR ++F
Sbjct: 193 EYDESLSASENRRVVIF 209
>gi|49258621|pdb|1R1M|A Chain A, Structure Of The Ompa-Like Domain Of Rmpm From Neisseria
Meningitidis
Length = 164
Score = 44.0 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 1/88 (1%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLR 104
S+ F S+R L L + +EGH D +GS + AL R
Sbjct: 11 ISLSAKTLFGFDKDSLRAEAQDNLKVLAQRLSRTNIQSVRVEGHTDFMGSDKYNQALSER 70
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEM 132
RAY V N V+ G+ SR+ G+
Sbjct: 71 RAYVVANNLVSNGVPVSRISAVGLGESQ 98
>gi|307318588|ref|ZP_07598022.1| OmpA/MotB domain protein [Sinorhizobium meliloti AK83]
gi|306895928|gb|EFN26680.1| OmpA/MotB domain protein [Sinorhizobium meliloti AK83]
Length = 489
Score = 44.0 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 8/108 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWL-----EKHDCDFLIEGHADELGSRNSSIALGLR 104
D++ F T S + + + + N+ + + F IEGH D +G+ S++ L
Sbjct: 371 DTITFATGSAEVSMSQAKTMRNVAEAMNKVLEKDPGETFFIEGHTDAVGADQSNLVLSDE 430
Query: 105 RAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA +V GI A + YG+ + + +NRR +
Sbjct: 431 RAESVAVLLTEVYGIPAENLVTQGYGERFLKIRTDGPE--QENRRVTI 476
>gi|46398695|gb|AAS92033.1| IcmN protein [Legionella pneumophila]
Length = 167
Score = 44.0 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 19/143 (13%), Positives = 48/143 (33%), Gaps = 1/143 (0%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL 72
++ + + +S+ + S+ S F S + A +L+ +
Sbjct: 21 CSVDGACDATIIKMMTDLNKKGIKVASVGQNDLISIXASALFADQSPRLNWASYSLLNEI 80
Query: 73 GSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
++ + + ++ + S AL L R+ V Y ++G+ + + G +
Sbjct: 81 AAFLKQFRKIAITVTSYSSKYVSVKRERALTLARSRVVSEYLWSQGVDSRIIFTQGLGSD 140
Query: 132 MPSVYGHDEDAYAKNRRAIVFLK 154
P + N R + +
Sbjct: 141 KPITSYTLGGDRSPNARVEITFR 163
>gi|90423604|ref|YP_531974.1| OmpA/MotB [Rhodopseudomonas palustris BisB18]
gi|90105618|gb|ABD87655.1| OmpA/MotB [Rhodopseudomonas palustris BisB18]
Length = 275
Score = 44.0 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 44/152 (28%), Gaps = 10/152 (6%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
A+ S+ +++ + +E + + D F S
Sbjct: 114 FALASASLRQALQDLPELTELSKNIMFEETKEGLNLEIIDQDGRSMFADGSKVPFERTRL 173
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL----GSRNSSIALGLRRAYAVFNYFVARGISASRM 123
++ L + L I GH + ++ L RA AV G+ S +
Sbjct: 174 LIQKLAAPLRATPLRVSIVGHTSAGLMPGRTDYNAFDLSSDRANAVRQILEREGLPTSHV 233
Query: 124 KVT-SYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
P D+ A NRR + L
Sbjct: 234 FAVSGKADSQPLFP--DDPMLAANRRVTITLM 263
>gi|89067611|ref|ZP_01155065.1| Outer membrane protein, OmpA/MotB family protein [Oceanicola
granulosus HTCC2516]
gi|89046581|gb|EAR52636.1| Outer membrane protein, OmpA/MotB family protein [Oceanicola
granulosus HTCC2516]
Length = 675
Score = 44.0 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 8/106 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNL-----GSWLEKHDCDFLIEGHADELGSRNSSIALGLR 104
+ + F+T+S +IRP + + L+ L E FLIEGH D +G+ + ++AL R
Sbjct: 562 EEINFETASAAIRPEEAEELAALGQAITAIIRENPRAVFLIEGHTDAVGNASYNLALSDR 621
Query: 105 RAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
RA +V + + YG+ V +A NRRA
Sbjct: 622 RAESVALALTEYFGVPPENLVTQGYGESQLLVP--TAEAERANRRA 665
>gi|150396796|ref|YP_001327263.1| OmpA/MotB domain-containing protein [Sinorhizobium medicae WSM419]
gi|150028311|gb|ABR60428.1| OmpA/MotB domain protein [Sinorhizobium medicae WSM419]
Length = 720
Score = 44.0 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 44/108 (40%), Gaps = 8/108 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWL-----EKHDCDFLIEGHADELGSRNSSIALGLR 104
D++ F T S + + + + + + + F IEGH D +G+ S++ L
Sbjct: 602 DTITFATGSAEVSMSQAKTMRKVAEAMNKVLEKDPGETFFIEGHTDAVGADQSNLVLSDE 661
Query: 105 RAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA +V G+ A + YG+ + + +NRR +
Sbjct: 662 RAESVAVLLTEVYGVPAENLVTQGYGERFLKIRTDGPE--QENRRVTI 707
>gi|170739034|ref|YP_001767689.1| OmpA/MotB domain-containing protein [Methylobacterium sp. 4-46]
gi|168193308|gb|ACA15255.1| OmpA/MotB domain protein [Methylobacterium sp. 4-46]
Length = 624
Score = 43.6 bits (101), Expect = 0.008, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 8/126 (6%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-----EKHDCDFL 84
+ D V + SL+ + S D++ F+T S+ + P + L+ + + FL
Sbjct: 485 TLDEVRSSPSLRARMRSVDIDTITFETGSWQVAPDQARRLAAIAEAIRRAVEHNPQEVFL 544
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAY 143
IEGH D +GS +++L RRA V + + YG++ V + ++A
Sbjct: 545 IEGHTDAVGSEVDNLSLSDRRAQEVAAVLTRDFRVPPENLTTQGYGEQYLKV--NTQEAN 602
Query: 144 AKNRRA 149
+NRR
Sbjct: 603 RENRRV 608
>gi|83954367|ref|ZP_00963087.1| Outer membrane protein, OmpA/MotB family protein [Sulfitobacter sp.
NAS-14.1]
gi|83841404|gb|EAP80574.1| Outer membrane protein, OmpA/MotB family protein [Sulfitobacter sp.
NAS-14.1]
Length = 665
Score = 43.6 bits (101), Expect = 0.008, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 8/108 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGS-----WLEKHDCDFLIEGHADELGSRNSSIALGLR 104
D+V F T S +I+P + LS +G+ + L+EGH D +G+ ++AL R
Sbjct: 551 DAVRFATGSAAIQPEQARALSKIGTAISNAIKDDPRTVILVEGHTDAVGNAGYNLALSDR 610
Query: 105 RAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA V + YG+ V + NRRA+V
Sbjct: 611 RAETVALALTEYFDVPPANLITQGYGESALKVPTETAE--PANRRAVV 656
>gi|260777763|ref|ZP_05886656.1| hypothetical protein VIC_003160 [Vibrio coralliilyticus ATCC
BAA-450]
gi|260605776|gb|EEX32061.1| hypothetical protein VIC_003160 [Vibrio coralliilyticus ATCC
BAA-450]
Length = 1581
Score = 43.6 bits (101), Expect = 0.008, Method: Composition-based stats.
Identities = 18/143 (12%), Positives = 50/143 (34%), Gaps = 18/143 (12%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW------LEKH 79
K + + + + + + + F+ +S L + + +
Sbjct: 585 EKARAASDEITATMVNNSRGAGIK--IEFNFNSRKSELERNAPLFSQLASALAEVLESES 642
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV-ARGISASRMKVTSYGKEMPSV--- 135
+ IEGHA ++ + +++ + RA + + + R+ V +G+ P
Sbjct: 643 NLRVEIEGHACQVDTEEANMKVSADRANYAKQLLIESSDVFKDRISVAVFGESKPLYIPK 702
Query: 136 -----YGHDEDAYAKNRRAIVFL 153
++ + +NRR + +
Sbjct: 703 KGESIDRNNPNLR-QNRRVEIRI 724
>gi|260466608|ref|ZP_05812796.1| OmpA/MotB domain protein [Mesorhizobium opportunistum WSM2075]
gi|259029614|gb|EEW30902.1| OmpA/MotB domain protein [Mesorhizobium opportunistum WSM2075]
Length = 466
Score = 43.6 bits (101), Expect = 0.008, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 41/126 (32%), Gaps = 9/126 (7%)
Query: 33 TVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHA 89
++ + + S+ D + F+ S + + +G + I GH
Sbjct: 337 DGVSVEATDKGVVISITDRLDFGMFEVGSALPSRELVLAMEKIGRIVNSQKGTISINGHT 396
Query: 90 DELGSR---NSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAK 145
D R + L RA++ + V G+ R+ V + P A
Sbjct: 397 DARPFRSDSYDNWRLSTARAHSAYYMLVRGGVDERRITEVAGFADRQPKDPADPMA--AV 454
Query: 146 NRRAIV 151
NRR +
Sbjct: 455 NRRIEI 460
>gi|163743880|ref|ZP_02151251.1| OmpA domain protein [Phaeobacter gallaeciensis 2.10]
gi|161382821|gb|EDQ07219.1| OmpA domain protein [Phaeobacter gallaeciensis 2.10]
Length = 518
Score = 43.6 bits (101), Expect = 0.008, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 45/108 (41%), Gaps = 7/108 (6%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLE---KHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
F+ S ++ L LE + + G +D G + + ++ +RA AV
Sbjct: 411 FEPGSTRPDAQSRSNITQLARSLEAGAYDARELVFVGFSDGDGPASGNRSIAKKRAEAVR 470
Query: 111 NYFVARGISAS----RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ +A +A+ +++ ++G+ +P NRR V+++
Sbjct: 471 DAVIAAAETANLERTEIEIAAFGEALPMACEDQRWGRQVNRRVEVWVR 518
>gi|28900586|ref|NP_800241.1| hypothetical protein VPA0731 [Vibrio parahaemolyticus RIMD 2210633]
gi|153840625|ref|ZP_01993292.1| outer membrane protein [Vibrio parahaemolyticus AQ3810]
gi|260365466|ref|ZP_05778003.1| outer membrane protein [Vibrio parahaemolyticus K5030]
gi|260877531|ref|ZP_05889886.1| outer membrane protein [Vibrio parahaemolyticus AN-5034]
gi|260897528|ref|ZP_05906024.1| outer membrane protein [Vibrio parahaemolyticus Peru-466]
gi|260901730|ref|ZP_05910125.1| outer membrane protein [Vibrio parahaemolyticus AQ4037]
gi|28808966|dbj|BAC62074.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
gi|149745713|gb|EDM56843.1| outer membrane protein [Vibrio parahaemolyticus AQ3810]
gi|308087083|gb|EFO36778.1| outer membrane protein [Vibrio parahaemolyticus Peru-466]
gi|308090536|gb|EFO40231.1| outer membrane protein [Vibrio parahaemolyticus AN-5034]
gi|308108906|gb|EFO46446.1| outer membrane protein [Vibrio parahaemolyticus AQ4037]
gi|308114281|gb|EFO51821.1| outer membrane protein [Vibrio parahaemolyticus K5030]
Length = 187
Score = 43.6 bits (101), Expect = 0.008, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 52/141 (36%), Gaps = 4/141 (2%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
++ + N D I + + + S + + Y + +
Sbjct: 47 LASVINEDLSIVQDEKIEKVEATNATESCTFDKNSMSLVLHYDTNEHYLTNVHKQAISKY 106
Query: 78 ----KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
D L+EGH D++GS+ + +L LRRA Y +R+ ++G+ P
Sbjct: 107 LELVNEDKRILVEGHTDDVGSQAYNKSLSLRRASTASKYLKKDLGLGNRIVEKAFGESAP 166
Query: 134 SVYGHDEDAYAKNRRAIVFLK 154
++ NRR ++ ++
Sbjct: 167 ICKVNENKLSGCNRRVVLTIE 187
>gi|186682639|ref|YP_001865835.1| OmpA/MotB domain-containing protein [Nostoc punctiforme PCC 73102]
gi|186465091|gb|ACC80892.1| OmpA/MotB domain protein [Nostoc punctiforme PCC 73102]
Length = 657
Score = 43.6 bits (101), Expect = 0.008, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 53/142 (37%), Gaps = 11/142 (7%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQ---VLSNLGSWLE 77
++N + +++LQ+ V + V F S + + + + + L
Sbjct: 499 VENDRASAQDGQSATFDAALQKHQDFYVHEPVIFYFDFDSDQLSSSETGKIDTFLDYLRR 558
Query: 78 KHDCDFLIEGHADELG-SRNSSIALGLRRAYAVFNYFVARGISASRMKVT--SYGKEM-- 132
D EG AD G + ++ L LRRA AV A+G++ +++ G
Sbjct: 559 FPDVKVTPEGFADRRGGASGHNLDLSLRRAQAVGAALRAKGVAEAQISAVTIGSGSTEDF 618
Query: 133 -PSVYG--HDEDAYAKNRRAIV 151
P E NRR ++
Sbjct: 619 TPDATTNQDTEANRRGNRRVVL 640
>gi|192293517|ref|YP_001994122.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1]
gi|192287266|gb|ACF03647.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1]
Length = 216
Score = 43.6 bits (101), Expect = 0.008, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 41/105 (39%), Gaps = 6/105 (5%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGLRRAYA 108
+ F+ +S +I + LG L D F++ GH D +GS + + L RRA
Sbjct: 104 ITFEYNSANISRQAAAAVEALGKALSSPDLKGGTFVVAGHTDSVGSDSFNQDLSERRADT 163
Query: 109 VFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ V + A + YG+ H + NRR V
Sbjct: 164 IKRVLVEKYGIAGADLVTVGYGESRLKDPAHPDSG--INRRVQVV 206
>gi|260901886|ref|ZP_05910281.1| OmpA family protein [Vibrio parahaemolyticus AQ4037]
gi|308108170|gb|EFO45710.1| OmpA family protein [Vibrio parahaemolyticus AQ4037]
Length = 1580
Score = 43.6 bits (101), Expect = 0.008, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 36/84 (42%), Gaps = 10/84 (11%)
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPS--- 134
+ IEGHA ++G+ +++ + RA + R+ + ++G+ P
Sbjct: 638 PNLRVEIEGHACQVGTEKANMQVSAERAEYAKKLLMKEFPVFDGRVSIAAFGESKPVYVP 697
Query: 135 -----VYGHDEDAYAKNRRAIVFL 153
V ++ + +NRR ++ +
Sbjct: 698 KQGEKVDRNNPNLR-QNRRVVIRI 720
>gi|170693360|ref|ZP_02884520.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
gi|170141890|gb|EDT10058.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
Length = 230
Score = 43.6 bits (101), Expect = 0.008, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 45/118 (38%), Gaps = 5/118 (4%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLI 85
+ + S + ++ V F++ + P VL + + L + L+
Sbjct: 97 APLQDNRQITISHTPQGVEIAINAKVLFNSGDARLLPESFAVLDRIAAVLRDRAKNNILV 156
Query: 86 EGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
EGH D L S+ L RA AV +F +GI A RM P + G+D
Sbjct: 157 EGHTDSLPIATAKYESNWELSSARAGAVVRFFADKGIEAHRMAAIGRADNFPLIIGND 214
>gi|163737938|ref|ZP_02145354.1| OmpA/MotB [Phaeobacter gallaeciensis BS107]
gi|161388554|gb|EDQ12907.1| OmpA/MotB [Phaeobacter gallaeciensis BS107]
Length = 518
Score = 43.6 bits (101), Expect = 0.008, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 45/108 (41%), Gaps = 7/108 (6%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLE---KHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
F+ S ++ L LE + + G +D G + + ++ +RA AV
Sbjct: 411 FEPGSTRPDAQSRSNITQLARSLEAGAYDARELVFVGFSDGDGPASGNRSIAKKRAEAVR 470
Query: 111 NYFVARGISAS----RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ +A +A+ +++ ++G+ +P NRR V+++
Sbjct: 471 DAVIAAAETANLERTEIEIAAFGEALPMACEDQRWGRQVNRRVEVWVR 518
>gi|28898164|ref|NP_797769.1| hypothetical protein VP1390 [Vibrio parahaemolyticus RIMD 2210633]
gi|260366463|ref|ZP_05778902.1| OmpA family protein [Vibrio parahaemolyticus K5030]
gi|260878509|ref|ZP_05890864.1| OmpA family protein [Vibrio parahaemolyticus AN-5034]
gi|260897090|ref|ZP_05905586.1| OmpA family protein [Vibrio parahaemolyticus Peru-466]
gi|28806378|dbj|BAC59653.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
gi|308087682|gb|EFO37377.1| OmpA family protein [Vibrio parahaemolyticus Peru-466]
gi|308091128|gb|EFO40823.1| OmpA family protein [Vibrio parahaemolyticus AN-5034]
gi|308113073|gb|EFO50613.1| OmpA family protein [Vibrio parahaemolyticus K5030]
Length = 1580
Score = 43.6 bits (101), Expect = 0.008, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 36/84 (42%), Gaps = 10/84 (11%)
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI-SASRMKVTSYGKEMPS--- 134
+ IEGHA ++G+ +++ + RA + R+ + ++G+ P
Sbjct: 638 PNLRVEIEGHACQVGTEKANMQVSAERAEYAKKLLMKEFPVFDGRVSIAAFGESKPVYVP 697
Query: 135 -----VYGHDEDAYAKNRRAIVFL 153
V ++ + +NRR ++ +
Sbjct: 698 KQGEKVDRNNPNLR-QNRRVVIRI 720
>gi|120597323|ref|YP_961897.1| OmpA/MotB domain-containing protein [Shewanella sp. W3-18-1]
gi|120557416|gb|ABM23343.1| OmpA/MotB domain protein [Shewanella sp. W3-18-1]
Length = 305
Score = 43.6 bits (101), Expect = 0.008, Method: Composition-based stats.
Identities = 29/151 (19%), Positives = 56/151 (37%), Gaps = 9/151 (5%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSN 71
+ ++ N + SS + + + + + D+V F S ++P ++L +
Sbjct: 126 LTVLARQLNRVVQSSSMAENITVTIVPQGIRILIHDNVNRFMFTRGSAQMQPYFEELLLS 185
Query: 72 LGSWLEKHDCDFLIEGHADELG---SRNSSIALGLRRAYAVFNYFVARGISASR-MKVTS 127
LG L+ +I GH D S ++ L RA G+ + ++VT
Sbjct: 186 LGPILKNITNSMVISGHTDSTPYAGSLFTNWELSSERALLARRVLERGGVKRDQVIQVTG 245
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
++P + A NRR + A
Sbjct: 246 MADQVPYITSDTAA--AANRRIEALILTSSA 274
>gi|332186615|ref|ZP_08388358.1| ompA family protein [Sphingomonas sp. S17]
gi|332013267|gb|EGI55329.1| ompA family protein [Sphingomonas sp. S17]
Length = 220
Score = 43.6 bits (101), Expect = 0.008, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 53/129 (41%), Gaps = 8/129 (6%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPA---DIQVLSNLGSWLEKHDCDFL 84
+ +N ++Q + + + F+ +S + QV + E D FL
Sbjct: 95 TAPSAPAVNYGAVQRPRADLM---IGFELNSARLSAEGTRAAQVFARSLLMPELKDKRFL 151
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
IEGH D G + L RA AV +Y V G+ SR++ +G MP GH A
Sbjct: 152 IEGHTDLRGGARINGPLSTARAKAVADYLVTLGVDRSRLETRGFGSAMPL-PGHS-KADP 209
Query: 145 KNRRAIVFL 153
NRR L
Sbjct: 210 VNRRVEAEL 218
>gi|320537035|ref|ZP_08037014.1| OmpA family protein [Treponema phagedenis F0421]
gi|320146110|gb|EFW37747.1| OmpA family protein [Treponema phagedenis F0421]
Length = 165
Score = 43.6 bits (101), Expect = 0.008, Method: Composition-based stats.
Identities = 29/125 (23%), Positives = 51/125 (40%), Gaps = 2/125 (1%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGH 88
P E+ ++E+ + G +V+F +Y I L + L+ + I GH
Sbjct: 41 QPIAEPQEAPVEEKEPETDGFTVYFAPDTYVIDSFTAHKLDVIAEQLKAQNITHVKITGH 100
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+ +L + + L L+RA AV YF + A M++ G P+ + NR
Sbjct: 101 SAKLDTAKAENKLSLQRAVAVAEYFRSIGLFDADSMELEGLGANEPAGSHAEITKRHYNR 160
Query: 148 RAIVF 152
R +
Sbjct: 161 RVEIK 165
>gi|296274015|ref|YP_003656646.1| OmpA/MotB domain-containing protein [Arcobacter nitrofigilis DSM
7299]
gi|296098189|gb|ADG94139.1| OmpA/MotB domain protein [Arcobacter nitrofigilis DSM 7299]
Length = 256
Score = 43.6 bits (101), Expect = 0.008, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 49/138 (35%), Gaps = 13/138 (9%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV-LSNLGSWLEKHD 80
++ ++S+ + + +F+ + S+ F+ Y++ + +S + +
Sbjct: 101 QEVNEQVSTQSEQVQITEGNNEFTLDIPSSIMFNEGEYNLSNKSAKNFISKIARVIRTMP 160
Query: 81 CD--FLIEGHAD-----ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
I G+ D L RA +V + I +++KV++Y P
Sbjct: 161 QTFDIEIIGYTDRSNFKSDTIPRDGWDLSALRAISVVKELIKNRIDPAQLKVSAYSSYRP 220
Query: 134 SVYGHDEDAYAKNRRAIV 151
E NRR +
Sbjct: 221 KSENAVE-----NRRVEI 233
>gi|75675430|ref|YP_317851.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255]
gi|74420300|gb|ABA04499.1| OmpA/MotB [Nitrobacter winogradskyi Nb-255]
Length = 276
Score = 43.6 bits (101), Expect = 0.008, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 45/152 (29%), Gaps = 10/152 (6%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
A+ S+ +++ + +E + + D F S
Sbjct: 115 FALASASLRQALQDMPELTELSKHIMFEETKEGLNLEIVDQDGRSMFAEGSKEPYERTRM 174
Query: 68 VLSNLGSWLEKHDCDFLIEGHADE----LGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
++ L + L+ + GH + S L RA V G+ A +
Sbjct: 175 LIRRLAAPLKATPFRISVTGHTASNFIAMRSDYDGFDLSADRANVVRQILEREGVPAGHI 234
Query: 124 KVT-SYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
MP D+ + A NRR + L
Sbjct: 235 FAVSGKSDSMPLFP--DDPSLAANRRVTITLM 264
>gi|94312620|ref|YP_585829.1| flagellar motor rotation proteinOmpA/MotB [Cupriavidus
metallidurans CH34]
gi|93356472|gb|ABF10560.1| OmpA/MotB, protein that enables flagellar motor rotation
[Cupriavidus metallidurans CH34]
Length = 325
Score = 43.6 bits (101), Expect = 0.008, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 38/121 (31%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGL 103
+ F T S ++ P +L +G L + + GH D A
Sbjct: 158 QILDTQNRPMFRTGSAAVEPYMRTILREIGPVLNELPNKVSLSGHTDSAKYMMGQRAYSN 217
Query: 104 R-----RAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
RA A VA G+ ++ +V MP NRR + + R
Sbjct: 218 WELSADRANASRQELVAGGMEEGKLLRVLGLADTMPLEKNDPLA--PVNRRISIVVLNQR 275
Query: 158 A 158
A
Sbjct: 276 A 276
>gi|146294532|ref|YP_001184956.1| OmpA/MotB domain-containing protein [Shewanella putrefaciens CN-32]
gi|145566222|gb|ABP77157.1| OmpA/MotB domain protein [Shewanella putrefaciens CN-32]
Length = 305
Score = 43.6 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 29/151 (19%), Positives = 56/151 (37%), Gaps = 9/151 (5%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSN 71
+ ++ N + SS + + + + + D+V F S ++P ++L +
Sbjct: 126 LTVLARQLNRVVQSSSMAENITVTIVPQGIRILIHDNVNRFMFTRGSAQMQPYFEELLLS 185
Query: 72 LGSWLEKHDCDFLIEGHADELG---SRNSSIALGLRRAYAVFNYFVARGISASR-MKVTS 127
LG L+ +I GH D S ++ L RA G+ + ++VT
Sbjct: 186 LGPILKNITNSMVISGHTDSTPYAGSLFTNWELSSERALLARRVLERGGVKRDQVIQVTG 245
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
++P + A NRR + A
Sbjct: 246 MADQVPYITSDTAA--AANRRIEALILTSSA 274
>gi|330501613|ref|YP_004378482.1| flagellar motor protein MotB [Pseudomonas mendocina NK-01]
gi|328915900|gb|AEB56731.1| flagellar motor protein MotB [Pseudomonas mendocina NK-01]
Length = 334
Score = 43.6 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 38/129 (29%), Gaps = 10/129 (7%)
Query: 38 SSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
Q+ + D F S ++P +L + + I GH D
Sbjct: 150 EITQDGLRIQIMDAENRPMFALGSAELQPYFEDILLAMADTIRAVPNKISISGHTDAKPF 209
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRA 149
+ L RA A VA G ++ +V Y D NRR
Sbjct: 210 AGRGDFGNWELSSNRANAARRTLVAGGYPDEQVARVVGYASSA-LFDRADPFN-PVNRRI 267
Query: 150 IVFLKGCRA 158
+ + +A
Sbjct: 268 DIVVLTKKA 276
>gi|46398705|gb|AAS92038.1| IcmN protein [Legionella pneumophila]
Length = 164
Score = 43.6 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 19/143 (13%), Positives = 48/143 (33%), Gaps = 1/143 (0%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL 72
++ + + +S+ + S+ S F S + A +L+ +
Sbjct: 18 CSVDGACDATIIKMMTDLNKKGIKVASVGQNDLISIXASALFADQSPRLNWASYSLLNEI 77
Query: 73 GSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
++ + + ++ + S AL L R+ V Y ++G+ + + G +
Sbjct: 78 AAFLKQFRKIAITVTSYSSKYVSVKRERALTLARSRVVSEYLWSQGVDSRIIFTQGLGSD 137
Query: 132 MPSVYGHDEDAYAKNRRAIVFLK 154
P + N R + +
Sbjct: 138 KPITSYTLGGDRSPNARVEITFR 160
>gi|297184084|gb|ADI20203.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11]
Length = 863
Score = 43.6 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 41/132 (31%), Gaps = 29/132 (21%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
+VFFD + +R L + S + H D + + L RA +
Sbjct: 597 NVFFDLAQSELREESKVALDTVFSILQRNPTITIGLRSHTDYRDTDAKNDVLSQARAQSC 656
Query: 110 FNYFVARGISASRMKVTSYGKEMPSV----------------YGHDED------------ 141
+Y + +GI+A R+ G++ P V E
Sbjct: 657 VDYLIQKGITAERLTAVGMGEKEPFVISTEYKGYGVDKFKAGDNLTETFIKRLNKEDQEI 716
Query: 142 AYAKNRRAIVFL 153
A NRR +
Sbjct: 717 ANQINRRTDFKV 728
>gi|254294179|ref|YP_003060202.1| OmpA/MotB domain protein [Hirschia baltica ATCC 49814]
gi|254042710|gb|ACT59505.1| OmpA/MotB domain protein [Hirschia baltica ATCC 49814]
Length = 386
Score = 43.6 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 59/126 (46%), Gaps = 3/126 (2%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF---LIEGH 88
+T++ E+ + + S +V+F+ S + +V+++ ++ C I+G+
Sbjct: 259 ETLVEEAPVVNCVAQSQDFAVYFEWDSSVLTVPAQEVVNSATRRALENGCTISIATIDGY 318
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
D G++ + L RRA V + +ARG+ AS + + G+E + D NRR
Sbjct: 319 TDTSGNKAYNARLSARRAAVVRDALIARGVDASVVTTDAKGEEGLAKATADGVREPLNRR 378
Query: 149 AIVFLK 154
A + L
Sbjct: 379 AQIILS 384
>gi|269123022|ref|YP_003305599.1| OmpA/MotB domain-containing protein [Streptobacillus moniliformis
DSM 12112]
gi|268314348|gb|ACZ00722.1| OmpA/MotB domain protein [Streptobacillus moniliformis DSM 12112]
Length = 491
Score = 43.6 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 37/123 (30%), Positives = 48/123 (39%), Gaps = 14/123 (11%)
Query: 46 SSVGDSVFFDTSSYSIRPA------DIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSI 99
+ F Y + +IQ L S I GH D LGS + ++
Sbjct: 360 IELSADALFKFDKYKLEDMLEKGKMEIQELVKKLSTDYVRLDRIDIIGHTDRLGSDSYNL 419
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK-------NRRAIVF 152
ALGLRRA V +Y G++ + V S GK P V A AK NRR +
Sbjct: 420 ALGLRRAQTVRSYLQELGVTTP-ITVASKGKRDPKVKCPGTKATAKLKQCLLPNRRVEIN 478
Query: 153 LKG 155
L G
Sbjct: 479 LTG 481
>gi|209516113|ref|ZP_03264972.1| OmpA/MotB domain protein [Burkholderia sp. H160]
gi|209503397|gb|EEA03394.1| OmpA/MotB domain protein [Burkholderia sp. H160]
Length = 228
Score = 43.6 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 39/106 (36%), Gaps = 5/106 (4%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELG 93
+ + + + + F+ + P +VL+ + + + L+EGH D +
Sbjct: 103 ITVTDVPHGVEIGINAKILFNAGDARLLPDSFEVLNQIAQVLQKDSTGNVLVEGHTDSVP 162
Query: 94 S----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
S+ L RA AV Y V RGI R+ P V
Sbjct: 163 ISTAKYASNWELSSARAGAVVRYLVERGIEPHRLAAIGRADNFPLV 208
>gi|220923055|ref|YP_002498357.1| OmpA/MotB domain-containing protein [Methylobacterium nodulans ORS
2060]
gi|219947662|gb|ACL58054.1| OmpA/MotB domain protein [Methylobacterium nodulans ORS 2060]
Length = 192
Score = 43.6 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 49/135 (36%), Gaps = 6/135 (4%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS---WLEK 78
D+L + S + S+ + FD +S I A + +S LGS E
Sbjct: 49 DSLRNRTSLAAAERERLAALSADKPSIALDIPFDFNSSRIGDAALPQVSTLGSSLARPEL 108
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYG 137
D LI GH D GS + L RRA AV Y V + YGK V
Sbjct: 109 RDSTILIVGHTDGKGSDRVNQRLSERRAEAVKQYIVRNYDVPGANLISVGYGKSRLKVSN 168
Query: 138 HDEDAYAKNRRAIVF 152
+ A NRR
Sbjct: 169 NPYA--AANRRVTAI 181
>gi|149919334|ref|ZP_01907816.1| hypothetical protein PPSIR1_03938 [Plesiocystis pacifica SIR-1]
gi|149819834|gb|EDM79258.1| hypothetical protein PPSIR1_03938 [Plesiocystis pacifica SIR-1]
Length = 383
Score = 43.6 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS--ASRMKVTSYGK---E 131
+ + LI GHADE + + AL RRA V AR S R+ + + G+
Sbjct: 60 QDPELHLLIIGHADEDNTDEYNRALSQRRAEHVRERLAARLPSEARERLHLEARGEWDAS 119
Query: 132 MPSVYGHDEDAYAKNRRAIV 151
+ DEDA A+NRR +
Sbjct: 120 DRAEPSSDEDAKARNRRVEL 139
>gi|89902463|ref|YP_524934.1| OmpA/MotB [Rhodoferax ferrireducens T118]
gi|89347200|gb|ABD71403.1| OmpA/MotB [Rhodoferax ferrireducens T118]
Length = 314
Score = 43.6 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 56/156 (35%), Gaps = 11/156 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQV 68
A IS + + +TK++ + + + + D FD+ S ++P +
Sbjct: 130 AGISAKISALISGNTKLTEFSRQIRLETTADGLQIQIVDDQKRPMFDSGSAVVKPYMRDI 189
Query: 69 LSNLGSWLEKHDCDFLIEGHADELGSR-----NSSIALGLRRAYAVFNYFVARGISASRM 123
L +G L + ++GH D S+ L RA A VA G+ ++
Sbjct: 190 LREIGGALNGVENKISLDGHTDSSPYSSAQRGYSNWELSSDRANASRRELVAAGMPDDKL 249
Query: 124 -KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
+V + + A NRR + + A
Sbjct: 250 ARVVGLASSILLDP-ENPTG-AVNRRISITVMTREA 283
>gi|152982739|ref|YP_001354366.1| OmpA family protein [Janthinobacterium sp. Marseille]
gi|151282816|gb|ABR91226.1| OmpA family protein [Janthinobacterium sp. Marseille]
Length = 222
Score = 43.6 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 51/136 (37%), Gaps = 13/136 (9%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD 82
+ + ++ +L+ + + +V + I + L+
Sbjct: 86 KVAPAAIAANSCDFTIALESDQTFGLNQAVLNRAAKSRIDRDVLPKLTA-----CNGASG 140
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
I G+ D LG+ S+ AL +RA AV +Y +G++ MKVT G P +
Sbjct: 141 MTITGYTDLLGNARSNQALSEKRAAAVADYLKKKGVT-VNMKVTGVGASQPVKDCDSKLN 199
Query: 143 Y-------AKNRRAIV 151
A NRR ++
Sbjct: 200 RTKLVACLAPNRRVLI 215
>gi|241203119|ref|YP_002974215.1| flagellar motor protein MotB [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240857009|gb|ACS54676.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 443
Score = 43.6 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 49/130 (37%), Gaps = 7/130 (5%)
Query: 35 LNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
L ++ + S+ D F+ S R + + +G+ L++ + GH D
Sbjct: 315 LTVTASEGGLLVSISDQTDDSMFNIGSAVPRQEMVLAMEKIGAILKERGGAVAVRGHTDG 374
Query: 92 LG---SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
++N + L + RA + + V G+ R+ S + D A NRR
Sbjct: 375 RQYKGTQNENWRLSMDRAQSAYYMLVRGGLDEKRISQVSGFADRRLKLPSDPFN-ATNRR 433
Query: 149 AIVFLKGCRA 158
+ ++ +
Sbjct: 434 IEILVQADQG 443
>gi|59714403|ref|YP_207177.1| outer membrane protein [Vibrio fischeri ES114]
gi|59482680|gb|AAW88289.1| outer membrane protein [Vibrio fischeri ES114]
Length = 182
Score = 43.6 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 23/178 (12%), Positives = 46/178 (25%), Gaps = 27/178 (15%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---------- 50
M+YS + + ++S D + S +
Sbjct: 1 MKYSKFLFVGTLAVLVSACSNTPPDIHGREAQINDIQQETINAQSKQIAALNYKVQQLVE 60
Query: 51 ---------------SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR 95
V++ + + L K + G D +
Sbjct: 61 NNFPSPMISVTPRLYQVYYPYNVSKLTV--TPELRYSILKDAKQATRINLLGRTDGVRPT 118
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+S + + RA + +YFV GI + + V + NRR + +
Sbjct: 119 DSDKKVAMARAMFLRDYFVHNGIDPTLIYVNYASATDYADNNWSRIGRKNNRRVEIEI 176
>gi|83943232|ref|ZP_00955692.1| Outer membrane protein, OmpA/MotB family protein [Sulfitobacter sp.
EE-36]
gi|83846240|gb|EAP84117.1| Outer membrane protein, OmpA/MotB family protein [Sulfitobacter sp.
EE-36]
Length = 665
Score = 43.6 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 8/108 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGS-----WLEKHDCDFLIEGHADELGSRNSSIALGLR 104
D+V F T S +I+P + LS +G+ + L+EGH D +G+ ++AL R
Sbjct: 551 DAVRFATGSAAIQPEQARALSKIGTAISNAIKDDPRTVILVEGHTDAVGNAGYNLALSDR 610
Query: 105 RAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA V + YG+ V + NRRA+V
Sbjct: 611 RAETVALALTEYFDVPPANLITQGYGESALKVPTETAE--PANRRAVV 656
>gi|153836044|ref|ZP_01988711.1| chemotaxis protein LafU [Vibrio parahaemolyticus AQ3810]
gi|149750798|gb|EDM61543.1| chemotaxis protein LafU [Vibrio parahaemolyticus AQ3810]
Length = 330
Score = 43.6 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 31/153 (20%), Positives = 53/153 (34%), Gaps = 11/153 (7%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSN 71
+ +++ + T + +N + + + D F + P +L
Sbjct: 129 LAALAKVIEEMTAQINAQGNVNVTVTPQGLRIVLQDDYKQHMFSRGGAELTPFFEDLLLA 188
Query: 72 LGSWLEKHDCDFLIEGHADELGS-----RNSSIALGLRRAYAVFNYFVARGISASR-MKV 125
L E+ +I GH D + R S+ AL RA V G+ R M+V
Sbjct: 189 LAPLFEQVTNPLIISGHTDAIPFKKRFGRQSNWALSASRADVARKTLVEGGMPDDRVMQV 248
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
T DE ++NRR +F+ A
Sbjct: 249 TGMSDRALL--NPDEPDSSENRRIELFILTTPA 279
>gi|242279927|ref|YP_002992056.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
gi|242122821|gb|ACS80517.1| OmpA/MotB domain protein [Desulfovibrio salexigens DSM 2638]
Length = 240
Score = 43.6 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 43/132 (32%), Gaps = 5/132 (3%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHA 89
S D ++ + + + FF Q L+ + L+ I GH
Sbjct: 104 SDDGAVSMKEEDGELKIVMRGNAFFAPGQNIFEDKTRQYLAEVAEVLKTSKHAIHIIGHT 163
Query: 90 DELGSR----NSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYA 144
D + +S L RRA V + + + I R+ V+ G P +
Sbjct: 164 DASDAAKVGAQNSFELSARRAAKVAEFLINTKSIDPVRIIVSGRGGVAPELPDDMGKVEG 223
Query: 145 KNRRAIVFLKGC 156
NRR + +
Sbjct: 224 NNRRVEIVVINT 235
>gi|298291414|ref|YP_003693353.1| OmpA/MotB domain protein [Starkeya novella DSM 506]
gi|296927925|gb|ADH88734.1| OmpA/MotB domain protein [Starkeya novella DSM 506]
Length = 202
Score = 43.6 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 29/148 (19%), Positives = 54/148 (36%), Gaps = 8/148 (5%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
++A + ++ + + + L + +V + F S IRP
Sbjct: 54 TITAQLLRQMAEQAVANNVPLDLNKSAVAAQLFKLAQITV--QIQFALGSDIIRPESYAT 111
Query: 69 LSNLG---SWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMK 124
+ + + FLI G+ D G+R +++ L RA AV V G+ +R++
Sbjct: 112 IGAISDALHHPILFNYHFLIVGNTDTTGTRANNLKLSQARADAVKQALVTVFGVDPARLE 171
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
G+E NRR +F
Sbjct: 172 AVGLGQEDLQTPND-PTN-PINRRVQLF 197
>gi|28901412|ref|NP_801067.1| chemotaxis LafU protein [Vibrio parahaemolyticus RIMD 2210633]
gi|260362966|ref|ZP_05775835.1| chemotaxis protein LafU [Vibrio parahaemolyticus K5030]
gi|260880253|ref|ZP_05892608.1| chemotaxis protein LafU [Vibrio parahaemolyticus AN-5034]
gi|260895370|ref|ZP_05903866.1| chemotaxis protein LafU [Vibrio parahaemolyticus Peru-466]
gi|1346409|sp|Q03478|LAFU_VIBPA RecName: Full=Chemotaxis protein LafU
gi|677910|gb|AAA62355.1| LafU [Vibrio parahaemolyticus]
gi|1518954|gb|AAB07358.1| lateral flagellar MotB [Vibrio parahaemolyticus]
gi|28809959|dbj|BAC62900.1| chemotaxis LafU protein [Vibrio parahaemolyticus RIMD 2210633]
gi|308085707|gb|EFO35402.1| chemotaxis protein LafU [Vibrio parahaemolyticus Peru-466]
gi|308092138|gb|EFO41833.1| chemotaxis protein LafU [Vibrio parahaemolyticus AN-5034]
gi|308111945|gb|EFO49485.1| chemotaxis protein LafU [Vibrio parahaemolyticus K5030]
Length = 330
Score = 43.6 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 31/153 (20%), Positives = 53/153 (34%), Gaps = 11/153 (7%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSN 71
+ +++ + T + +N + + + D F + P +L
Sbjct: 129 LAALAKVIEEMTAQINAQGNVNVTVTPQGLRIVLQDDYKQHMFSRGGAELTPFFEDLLLA 188
Query: 72 LGSWLEKHDCDFLIEGHADELGS-----RNSSIALGLRRAYAVFNYFVARGISASR-MKV 125
L E+ +I GH D + R S+ AL RA V G+ R M+V
Sbjct: 189 LAPLFEQVTNPLIISGHTDAIPFKKRFGRQSNWALSASRADVARKTLVEGGMPDDRVMQV 248
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
T DE ++NRR +F+ A
Sbjct: 249 TGMSDRALL--NPDEPDSSENRRIELFILTTPA 279
>gi|90423959|ref|YP_532329.1| OmpA/MotB [Rhodopseudomonas palustris BisB18]
gi|90105973|gb|ABD88010.1| OmpA/MotB [Rhodopseudomonas palustris BisB18]
Length = 283
Score = 43.6 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 26/152 (17%), Positives = 42/152 (27%), Gaps = 10/152 (6%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
A+ S+ +I+ + + + + D F S +
Sbjct: 122 FALASASLRQALQEMPEITEISKNVMFEETPQGLNLQIVDQEGRPMFPDGSPLPYERTML 181
Query: 68 VLSNLGSWLEKHDCDFLIEGHADELGSRNSSIA----LGLRRAYAVFNYFV-ARGISASR 122
++ L + L I GH G+ L +RA V S+
Sbjct: 182 LVRKLAAPLRATALRISIVGHTSSTGAPGRDDDDAFVLSWQRANTVRQILKGEGLPSSHV 241
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
VT P D A NRR + L
Sbjct: 242 FAVTGKADSEPLFP--DAPLLAANRRVTITLM 271
>gi|307944455|ref|ZP_07659795.1| OmpA/MotB [Roseibium sp. TrichSKD4]
gi|307772204|gb|EFO31425.1| OmpA/MotB [Roseibium sp. TrichSKD4]
Length = 284
Score = 43.6 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 23/152 (15%), Positives = 43/152 (28%), Gaps = 10/152 (6%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
A S+ +I+ + + +E + + D F S +
Sbjct: 123 FATAAASLRQAWQEMPEITEISSNIILEESEEGLNIMLVDQDGRSMFREGSKYPYETTRR 182
Query: 68 VLSNLGSWLEKHDCDFLIEGHAD----ELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
+L+ + L + I GH + + L RA G+ +++
Sbjct: 183 LLAKMAPVLSQMPNRVEITGHTTAGGRSVDPAYTGWDLSAERANVARQILAEYGVPSNQF 242
Query: 124 KVT-SYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
P A NRR + LK
Sbjct: 243 YAVIGKSDSEPLFPND--PYLASNRRVEILLK 272
>gi|114777571|ref|ZP_01452552.1| flagellar motor protein [Mariprofundus ferrooxydans PV-1]
gi|114552042|gb|EAU54559.1| flagellar motor protein [Mariprofundus ferrooxydans PV-1]
Length = 258
Score = 43.6 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 41/117 (35%), Gaps = 12/117 (10%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGS----RNSS 98
+ + F + P ++ L +K + IEGH D + S+
Sbjct: 117 LRIRFPEHIAFAAGHVDLSPKARTLIDKLAIIFQKPEVTEIQIEGHTDATPTKNSDYPSN 176
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA-KNRRAIVFLK 154
L RA AVF+ +G+ RM G + P + +RR + LK
Sbjct: 177 WELSAARAMAVFHELAEQGVPRGRMIAAGMGDQHPI------KGHPELSRRVDITLK 227
>gi|88798781|ref|ZP_01114364.1| ABC-type phosphate transport system, periplasmic component
[Reinekea sp. MED297]
gi|88778544|gb|EAR09736.1| ABC-type phosphate transport system, periplasmic component
[Reinekea sp. MED297]
Length = 445
Score = 43.6 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 43/113 (38%), Gaps = 5/113 (4%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL---EKHDCDFLIEGHADELGSRNSSIAL 101
S + + F + + + L L +++ E D ++ G +D+ + + +
Sbjct: 335 SERITTNFRFRPGTNHLDNKAMDDLDRLAAFMARPENKDRKLILIGFSDQQNNEFRAQLV 394
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
R V +GI +S + YG P D +N+R V+++
Sbjct: 395 SEARVIQVKRALAEKGIQSSALT--GYGHLNPVASNVDPKYALRNQRIEVWIR 445
>gi|209547941|ref|YP_002279858.1| flagellar motor protein MotB [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209533697|gb|ACI53632.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 447
Score = 43.3 bits (100), Expect = 0.010, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 42/113 (37%), Gaps = 4/113 (3%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS---RNSSIALGLRR 105
D FD S R + + +G+ L++ I GH D +N + L + R
Sbjct: 336 SDDSMFDIGSAVPRQEMVLAMEKIGAILKERGGAVAIRGHTDGRQYKGAQNENWRLSMDR 395
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
A + + V G+ R+ S + D A NRR + ++ R
Sbjct: 396 AQSAYYMLVRGGLDEKRISQVSGFADRRLKLPSDPFN-ATNRRIEILVQADRG 447
>gi|254474599|ref|ZP_05087985.1| OmpA/MotB [Ruegeria sp. R11]
gi|214028842|gb|EEB69677.1| OmpA/MotB [Ruegeria sp. R11]
Length = 518
Score = 43.3 bits (100), Expect = 0.010, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 43/108 (39%), Gaps = 7/108 (6%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLE---KHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
F+ S + L LE + L G +D G ++ ++ ++RA +V
Sbjct: 411 FEPGSTRPDAQSRSNIQQLARALEAGAYDARELLFVGFSDGDGGAAANQSIAMKRAESVR 470
Query: 111 NYFVAR----GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ +A I + + V ++G+ +P NRR V+++
Sbjct: 471 DAVIAAAETANIDRTEIAVEAFGEALPMACDDQRWGRQVNRRVEVWVR 518
>gi|307727324|ref|YP_003910537.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003]
gi|307587849|gb|ADN61246.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003]
Length = 230
Score = 43.3 bits (100), Expect = 0.010, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 45/118 (38%), Gaps = 5/118 (4%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLI 85
+ + + + ++ V F++ + VL+ + + L + L+
Sbjct: 97 APLQDNRQITIAHSPQGVEIAINAKVLFNSGDARLLQESYGVLNQIATVLRDRAKNNILV 156
Query: 86 EGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
EGH D L S+ L RA AV +F +GI A RM P + G+D
Sbjct: 157 EGHTDSLPIATAKYESNWELSSARAGAVVRFFADKGIQAHRMAAIGRADNFPLIIGND 214
>gi|189461675|ref|ZP_03010460.1| hypothetical protein BACCOP_02339 [Bacteroides coprocola DSM 17136]
gi|189431647|gb|EDV00632.1| hypothetical protein BACCOP_02339 [Bacteroides coprocola DSM 17136]
Length = 364
Score = 43.3 bits (100), Expect = 0.010, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 56/135 (41%), Gaps = 8/135 (5%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH- 79
+ + + + +Q ++ ++VFF +S +IR + Q + L +++ H
Sbjct: 234 TPQPAPVVKEEPKPVQQPAPVKQEKVTMTENVFFALNSSAIRSGEKQKIEKLAEFMKNHA 293
Query: 80 DCDFLIEGHADELG-SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+C I G+AD+ + + ++ L +RA V GI + R+ V G
Sbjct: 294 ECKVTICGYADKQTGNADINMRLSKKRAENVATQLKEMGIDSQRITVDYKGDT--VQPFS 351
Query: 139 DEDAYAKNRRAIVFL 153
+ +N R + +
Sbjct: 352 TPE---EN-RVSICI 362
>gi|209547147|ref|YP_002279065.1| OmpA/MotB domain-containing protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209538391|gb|ACI58325.1| OmpA/MotB domain protein [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 189
Score = 43.3 bits (100), Expect = 0.010, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 6/105 (5%)
Query: 52 VFFDTSSYSIRPADIQVLSNLG---SWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
+ F+ +S +I P + + + + FLI GH+ GS ++ L +RA A
Sbjct: 81 IDFENNSTAIEPESYRTVGLIADALHHPDLFRYKFLIVGHSSSTGSAKHNLELSQKRADA 140
Query: 109 VFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ +S R+ G+E P GH E A NRR +
Sbjct: 141 INEALSTTFAVSPDRLFSVGAGEEWPINPGHPES--ADNRRVQLI 183
>gi|16265946|gb|AAL16679.1|AF358690_1 flagellar motor rotation protein [Helicobacter hepaticus]
Length = 98
Score = 43.3 bits (100), Expect = 0.010, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 21/72 (29%), Gaps = 5/72 (6%)
Query: 78 KHDCDFLIEGHADELG-----SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
+ G+ D + L R+ +V + GIS R+ + YG+
Sbjct: 27 PDYVKIDVRGYTDNAPLPVGSRYKDNYELSSARSLSVMKNLIKNGISPERISFSGYGEHQ 86
Query: 133 PSVYGHDEDAYA 144
A
Sbjct: 87 AVAPNDSALNRA 98
>gi|312958642|ref|ZP_07773162.1| chemotaxis MotB protein [Pseudomonas fluorescens WH6]
gi|311287185|gb|EFQ65746.1| chemotaxis MotB protein [Pseudomonas fluorescens WH6]
Length = 339
Score = 43.3 bits (100), Expect = 0.011, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 45/142 (31%), Gaps = 10/142 (7%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ ++ ++ E + D FD+ S ++P +L + ++
Sbjct: 135 NPQMMKFKDQISFEITPEGLRIQITDAANRPMFDSGSARLKPYFEDILLAMADTIKTVPN 194
Query: 82 DFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVY 136
I GH D + L RA A VA ++ +V +
Sbjct: 195 KISISGHTDAKPYAGQGDFGNWELSANRANAARRALVAGSYPDPQVARVVGFASSQ-LFD 253
Query: 137 GHDEDAYAKNRRAIVFLKGCRA 158
D A NRR + + +A
Sbjct: 254 HKDPFNPA-NRRIDIVVLTKKA 274
>gi|305665203|ref|YP_003861490.1| OmpA family protein [Maribacter sp. HTCC2170]
gi|88709956|gb|EAR02188.1| OmpA family protein [Maribacter sp. HTCC2170]
Length = 640
Score = 43.3 bits (100), Expect = 0.011, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 6/112 (5%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
+FD +I L + IE H + GS+ S+ L RR+ A
Sbjct: 525 QKFYFDRGKSNITLKIKTELDKVVDAVQRFPQLKLTIESHTNSKGSKRSNQQLSQRRSEA 584
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDED-----AYAKNRRAIVFLKG 155
+ Y G+S++ +K YG+E D + +N R+ + +
Sbjct: 585 IKTYLTTNGLSSANIKAVGYGEEKLVNNCADGVYCLQFLHNQNERSYIVISN 636
>gi|152985187|ref|YP_001351001.1| flagellar motor protein MotB [Pseudomonas aeruginosa PA7]
gi|150960345|gb|ABR82370.1| chemotaxis protein MotB [Pseudomonas aeruginosa PA7]
Length = 342
Score = 43.3 bits (100), Expect = 0.011, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 37/120 (30%), Gaps = 7/120 (5%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ FD S ++P +L + + + I GH D +
Sbjct: 165 QIVDAANRPMFDLGSARLQPYFEDILLAMAETIRQVPNKISISGHTDAKPYAGNGDFGNW 224
Query: 100 ALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
L RA A VA G +++ V Y D NRR + + +A
Sbjct: 225 ELSANRANAARRALVAGGYPETQISQVVGYASAR-LFDDKDPLN-PVNRRIDIVVLTRKA 282
>gi|300727039|ref|ZP_07060458.1| immunogenic 23 kDa lipoprotein PG3 [Prevotella bryantii B14]
gi|299775583|gb|EFI72174.1| immunogenic 23 kDa lipoprotein PG3 [Prevotella bryantii B14]
Length = 229
Score = 43.3 bits (100), Expect = 0.011, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK-HDCDFLIEGHADELG 93
+ +++ + + + FD +++ A L+ S L+ I+G+ D G
Sbjct: 96 VTDANGLKAIKVTFDSGLQFDLGKSTLKSAAKNDLAKFASTLKNDPMLAVDIQGYTDATG 155
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
++ L +RA AV +Y V++G+S+S+ K V Y P V +NRR V+
Sbjct: 156 GDAINLPLSDKRAKAVSSYLVSQGVSSSQFKNVAGYASANPIV-NATVA--PENRRVEVY 212
Query: 153 L 153
L
Sbjct: 213 L 213
>gi|217976235|ref|YP_002360382.1| OmpA/MotB domain protein [Methylocella silvestris BL2]
gi|217501611|gb|ACK49020.1| OmpA/MotB domain protein [Methylocella silvestris BL2]
Length = 402
Score = 43.3 bits (100), Expect = 0.011, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 45/137 (32%), Gaps = 11/137 (8%)
Query: 30 SPDTVLNESSLQEQFSSSVGDS---VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ + E S+ D F S + P I+ ++ +G L+ ++
Sbjct: 269 GDGPRIEVENTDEGLLISLTDDRKFSMFAIGSAAPLPQTIEAMAKIGDLLKTRSGMVVVR 328
Query: 87 GHADELGSR---NSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMP-SVYGHDED 141
GH D + + L RA+ G+ R++ + +
Sbjct: 329 GHTDARPFKSATYDNWRLSTARAHMAQYMLTRGGLDEKRIEKIEGFADHRLKVAAEPTA- 387
Query: 142 AYAKNRRAIVFLKGCRA 158
A NRR + L+ ++
Sbjct: 388 --AANRRIEILLRKVKS 402
>gi|323529150|ref|YP_004231302.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1001]
gi|323386152|gb|ADX58242.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1001]
Length = 349
Score = 43.3 bits (100), Expect = 0.011, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 45/132 (34%), Gaps = 12/132 (9%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTS---SYSIRPADIQVLSNLGSWLEKHDC--DFLIEG 87
+ ++ F ++ PA + L + L + I G
Sbjct: 214 PAAAAPQSTTPQAVTLRADSLFRFDGGNDAAMLPAGRRALDAVARRLTTVTALREIRITG 273
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH----DE--D 141
+ D LG + +L L+RA V Y ARG+++ + V P DE
Sbjct: 274 YTDRLGENAHNRSLSLQRAQTVARYLRARGVTSP-IAVRGLASANPVAECRQSRRDELVQ 332
Query: 142 AYAKNRRAIVFL 153
A NRR + L
Sbjct: 333 CLAPNRRVEIEL 344
>gi|269122960|ref|YP_003305537.1| YadA domain-containing protein [Streptobacillus moniliformis DSM
12112]
gi|268314286|gb|ACZ00660.1| YadA domain protein [Streptobacillus moniliformis DSM 12112]
Length = 2078
Score = 43.3 bits (100), Expect = 0.011, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 41/105 (39%), Gaps = 4/105 (3%)
Query: 54 FDTSSYSIRPADIQVLSNLGS--WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
+ + + + ++L N+ + I G+ D + N ++ LGL+RA V
Sbjct: 1974 YRLGIHELTKSQEEMLMNIVRELNENYKNRKIYITGYTDNVSGENLNLELGLKRANVVAK 2033
Query: 112 YFVAR--GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+S S KV+S G + + NRR + L+
Sbjct: 2034 KLRELGLDMSISIRKVSSSGYNNIVETNKSSNGRSSNRRVEIELR 2078
>gi|328469346|gb|EGF40292.1| chemotaxis LafU protein [Vibrio parahaemolyticus 10329]
Length = 330
Score = 43.3 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 31/153 (20%), Positives = 53/153 (34%), Gaps = 11/153 (7%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSN 71
+ +++ + T + +N + + + D F + P +L
Sbjct: 129 LAALAKVIEEMTAQINAQGNVNVTVTPQGLRIVLQDDYKQHMFSRGGAELTPFFEDLLLA 188
Query: 72 LGSWLEKHDCDFLIEGHADELGS-----RNSSIALGLRRAYAVFNYFVARGISASR-MKV 125
L E+ +I GH D + R S+ AL RA V G+ R M+V
Sbjct: 189 LAPLFERVTNPLIISGHTDAIPFKKRFGRQSNWALSASRADVARKTLVEGGMPDDRVMQV 248
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
T DE ++NRR +F+ A
Sbjct: 249 TGMSDRALL--NPDEPDSSENRRIELFILTTPA 279
>gi|255535771|ref|YP_003096142.1| OmpA/MotB [Flavobacteriaceae bacterium 3519-10]
gi|255341967|gb|ACU08080.1| OmpA/MotB [Flavobacteriaceae bacterium 3519-10]
Length = 427
Score = 43.3 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 40/100 (40%), Gaps = 6/100 (6%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNL-GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
D++ F+ +S + P L N+ D I ++D+ G ++ L +RA A
Sbjct: 324 DNLSFEFNSTKLTPESQTQLDNIKAILAAYPDAKIKIGAYSDKKGDDAANKTLSRQRADA 383
Query: 109 VFNYFVARGISASRMKVTSYGKEMP-SVYGHDEDAYAKNR 147
V + + A + YG+E ++ K+R
Sbjct: 384 VKSALAS----AQVISAEGYGEERATVAETASDEEREKDR 419
>gi|269123013|ref|YP_003305590.1| YadA domain-containing protein [Streptobacillus moniliformis DSM
12112]
gi|268314339|gb|ACZ00713.1| YadA domain protein [Streptobacillus moniliformis DSM 12112]
Length = 2092
Score = 43.3 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 41/105 (39%), Gaps = 4/105 (3%)
Query: 54 FDTSSYSIRPADIQVLSNLGS--WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
+ + + + ++L N+ + I G+ D + + ++ LGL+RA V
Sbjct: 1988 YRLGIHELTKSQEEMLMNIVRELNENYKNRKIYITGYTDNVSGEDLNLELGLKRANVVAK 2047
Query: 112 YFVAR--GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+S S KV+S G + + NRR + L+
Sbjct: 2048 KLRELGLDMSISIRKVSSSGYNNIVETNKSSNGRSSNRRVEIELR 2092
>gi|237725269|ref|ZP_04555750.1| major outer membrane protein OmpA [Bacteroides sp. D4]
gi|229436535|gb|EEO46612.1| major outer membrane protein OmpA [Bacteroides dorei 5_1_36/D4]
Length = 395
Score = 43.3 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 45/126 (35%), Gaps = 9/126 (7%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIE 86
+ V+ E Q + + SVFF S + L + ++ + +
Sbjct: 274 ANQSTEVVTEQVTVNQIAPA-PQSVFFQIGSAVLPTNSTVNLQQIADLVKDNPGLKLKVT 332
Query: 87 GHADELG-SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
G+AD S + L RA V N V G++ + + ++ G A
Sbjct: 333 GYADSDTGSAAWNKQLSEDRANNVANELVKLGVNKNNLIISGMGGVNTLTPP------AF 386
Query: 146 NRRAIV 151
NRR I+
Sbjct: 387 NRRVII 392
>gi|269123146|ref|YP_003305723.1| YadA domain-containing protein [Streptobacillus moniliformis DSM
12112]
gi|268314472|gb|ACZ00846.1| YadA domain protein [Streptobacillus moniliformis DSM 12112]
Length = 2073
Score = 43.3 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 41/105 (39%), Gaps = 4/105 (3%)
Query: 54 FDTSSYSIRPADIQVLSNLGS--WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
+ + + + ++L N+ + I G+ D + N ++ LGL+RA V
Sbjct: 1969 YRLGIHELTKSQEEMLMNIVRELNENYKNRKIYITGYTDNVSGENLNLELGLKRANVVAK 2028
Query: 112 YFVAR--GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+S S KV+S G + + NRR + L+
Sbjct: 2029 KLRELGLDMSISIRKVSSSGYNNIVETNKSSNGRSSNRRVEIELR 2073
>gi|269122961|ref|YP_003305538.1| YadA domain-containing protein [Streptobacillus moniliformis DSM
12112]
gi|268314287|gb|ACZ00661.1| YadA domain protein [Streptobacillus moniliformis DSM 12112]
Length = 2091
Score = 43.3 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 41/105 (39%), Gaps = 4/105 (3%)
Query: 54 FDTSSYSIRPADIQVLSNLGS--WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
+ + + + ++L N+ + I G+ D + + ++ LGL+RA V
Sbjct: 1987 YRLGIHELTKSQEEMLMNIVRELNENYKNRKIYITGYTDNVSGEDLNLELGLKRANVVAK 2046
Query: 112 YFVAR--GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+S S KV+S G + + NRR + L+
Sbjct: 2047 KLRELGLDMSISIRKVSSSGYNNIVETNKSSNGRSSNRRVEIELR 2091
>gi|78063638|ref|YP_373546.1| OmpA/MotB family outer membrane protein [Burkholderia sp. 383]
gi|77971523|gb|ABB12902.1| outer membrane protein, OmpA/MotB family [Burkholderia sp. 383]
Length = 318
Score = 43.3 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 52/152 (34%), Gaps = 11/152 (7%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSNL 72
++ + + + + E + DS+ F + S +LS +
Sbjct: 137 AKLTAAIAQSPSLRAYQDQIRIAITNEGLRIEIVDSLKRPMFASGSSQPESYATAILSQI 196
Query: 73 GSWLEKHDCDFLIEGHADELG-----SRNSSIALGLRRAYAVFNYFVARGISASRM-KVT 126
G+ L+ + I GH D + S+ L RA A VA G+ ++ +V
Sbjct: 197 GTALDDVENRVSIAGHTDSTPYPDGSTGYSNWELSSDRANAARRALVAGGLREDKLLQVR 256
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
+P ++ NRR + + A
Sbjct: 257 GLADVLPLDKNVADE--PTNRRISILVMNNAA 286
>gi|254966498|gb|ACT97225.1| TraQ [Synthetic plasmid pMOL98]
Length = 186
Score = 43.3 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 22/150 (14%), Positives = 46/150 (30%), Gaps = 12/150 (8%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIR---PAD 65
+++ ++ S + + + S SV F ++ +
Sbjct: 41 VIALRAQLAQSEEKLRVEQARPVISPAVLQPAPPPPARSRTFSVHFPYNNTNFHLSADDS 100
Query: 66 IQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
Q+L L + G D + + L RA A + + +G+S + + V
Sbjct: 101 AQLLPLLAK-----ARRIEVRGRTDGQRPSTADEKIALNRALAAQRFLIGQGVSPAIISV 155
Query: 126 --TSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S G + NRR + +
Sbjct: 156 NYVSAGDY--VADNFSAVGRSLNRRVDIEV 183
>gi|90419554|ref|ZP_01227464.1| conserved hypothetical protein, OmpA family [Aurantimonas
manganoxydans SI85-9A1]
gi|90336491|gb|EAS50232.1| conserved hypothetical protein, OmpA family [Aurantimonas
manganoxydans SI85-9A1]
Length = 388
Score = 43.3 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 8/107 (7%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWL-----EKHDCDFLIEGHADELGSRNSSIALGLRR 105
++ F+ S I ++ L L + E D FLIEGH D +GS +++AL RR
Sbjct: 269 TINFNFGSAEITQEEVGDLRALADAIARVIAENPDETFLIEGHTDAVGSERANLALSDRR 328
Query: 106 AYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
A V + YG++ V + +NRR V
Sbjct: 329 ADGVATALTQYFDVPPENLVTQGYGEQDLKVD--TQAENRENRRVTV 373
>gi|150024135|ref|YP_001294961.1| OmpA family outer membrane protein [Flavobacterium psychrophilum
JIP02/86]
gi|149770676|emb|CAL42140.1| Probable outer membrane protein, OmpA family [Flavobacterium
psychrophilum JIP02/86]
Length = 272
Score = 43.3 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 41/114 (35%), Gaps = 6/114 (5%)
Query: 45 SSSVGDSVFFDTSSYS-IRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGL 103
+ S++FD + + ++ + + I G+ D+ G + + L
Sbjct: 20 QEEIIHSIYFDFDKFKLEEKQANETVNFIKNIDSTRIESVQIYGYCDDRGKESYNFKLSN 79
Query: 104 RRAYAVFNYFVARGISASRM-KVTSYGK---EMPSVYGHDEDAYAKNRRAIVFL 153
RA + V GI + + G+ + + + +KNRR V +
Sbjct: 80 NRASIIQKKLVESGIKNKIIVTIEGKGRVMIDDDIIENL-PEVRSKNRRVDVVV 132
Score = 37.5 bits (85), Expect = 0.66, Method: Composition-based stats.
Identities = 26/112 (23%), Positives = 39/112 (34%), Gaps = 14/112 (12%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGHADELGSRN--------SSIAL 101
V F S + L + L + + F I+GH L
Sbjct: 163 DVLFQKGSSKLNVNAKNDLEKIAKMLLKYKNLQFEIQGHVCCTPPYQKEAIDRDTRKREL 222
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ RA V+N+FVA+ IS +RM YG P +RR + +
Sbjct: 223 SINRAKVVYNFFVAKKISKNRMIYKGYGTGKPLGKEP-----QYDRRVELVI 269
>gi|46398689|gb|AAS92030.1| IcmN protein [Legionella pneumophila]
Length = 189
Score = 43.3 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 44/119 (36%), Gaps = 1/119 (0%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSR 95
+S+ + S+ S F S + A +L+ + ++ + + ++ + S
Sbjct: 67 VASVGQNDLISIPASALFXDQSPRLNWASYSLLNEIAAFLKQFRKIAITVTSYSSKYVSV 126
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
AL L R+ V Y ++G+ + + G + P + N R + +
Sbjct: 127 KRERALTLARSRVVSEYLWSQGVDSRIIFTQGLGSDKPITSYTLGGDRSPNARVEITFR 185
>gi|110632645|ref|YP_672853.1| flagellar motor protein MotB [Mesorhizobium sp. BNC1]
gi|110283629|gb|ABG61688.1| OmpA/MotB [Chelativorans sp. BNC1]
Length = 452
Score = 42.9 bits (99), Expect = 0.013, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 45/129 (34%), Gaps = 7/129 (5%)
Query: 32 DTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGH 88
+ + S+ +E SV D + F S A + + +G L I GH
Sbjct: 322 ASSVTVSAGEEGVLISVTDDIRNGMFPVGSAVPERALVGAMEKIGKTLAGQPGTIRIHGH 381
Query: 89 ADELGSR---NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
D R + L RA+A + G+ +R+ + + A A
Sbjct: 382 TDARPFRSDTYDNWRLSTARAHAAQYMLIRGGLDETRITEVAGFADRKLKEPESPLADA- 440
Query: 146 NRRAIVFLK 154
NRR + L+
Sbjct: 441 NRRIEILLE 449
>gi|333010781|gb|EGK30207.1| lateral flagellar motor protein B [Shigella flexneri K-272]
gi|333021279|gb|EGK40532.1| lateral flagellar motor protein B [Shigella flexneri K-227]
Length = 256
Score = 42.9 bits (99), Expect = 0.013, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 7/149 (4%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
SA + ++ N + + + L + + + D F+ S I P
Sbjct: 70 SATELGELATSINTIARDAHMEANLEMEIVPQGLRVLIKDDQNRNMFERGSAQIMPFFKT 129
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+L L + D +I GH D + + ++ L RA + G+ ++
Sbjct: 130 LLVELAPVFDSLDNKIIITGHTDAMANKNNIYNNWNLSGDRALSARRVLEEAGMPEDKVM 189
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + + A NRR + +
Sbjct: 190 QVSAMADQMLLDAKNPQS-AGNRRIEIMV 217
>gi|307568444|pdb|3OON|A Chain A, The Structure Of An Outer Membrance Protein From Borrelia
Burgdorferi B31
Length = 123
Score = 42.9 bits (99), Expect = 0.013, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 45/111 (40%), Gaps = 3/111 (2%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGL 103
++ + F +S+ I + + + + + + LIEGH ++ G L
Sbjct: 12 GINLSFDIEFYPNSFQILQKEYKKIDLIAKLLEKFKKNNILIEGHTEQFGLEEEXHELSE 71
Query: 104 RRAYAVFNYFVA-RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+RA A+ NY + + ++ +G + P AKNRR + +
Sbjct: 72 KRARAIGNYLIKXKVKDKDQILFKGWGSQKPKYPKSSPL-KAKNRRVEITI 121
>gi|19352400|ref|NP_598158.1| hypothetical protein pB4p61 [uncultured bacterium]
gi|19070067|emb|CAD24383.1| Upf30.5 protein [uncultured bacterium]
Length = 147
Score = 42.9 bits (99), Expect = 0.014, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 45/150 (30%), Gaps = 11/150 (7%)
Query: 4 STIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRP 63
+F+ S + G + V + S S S +
Sbjct: 3 KALFLTFSLASFAFAPG--AMAAGPVGMSAVSYGEPVMTAVSVSFP-------DSSTTFR 53
Query: 64 ADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
D L K I G L + S AL LRRA + Y +ARG+S ++
Sbjct: 54 PDASTAELLAE--AKGAAIIYISGRTSTLRASASDEALALRRALSARQYLIARGVSPLKI 111
Query: 124 KVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V + +N+R + +
Sbjct: 112 MVNFASASDFVADNSTPEGRYQNQRVDIEV 141
>gi|311294119|gb|ADP88815.1| outer membrane protein [Vibrio parahaemolyticus]
gi|311294123|gb|ADP88817.1| outer membrane protein [Vibrio parahaemolyticus]
gi|311294125|gb|ADP88818.1| outer membrane protein [Vibrio parahaemolyticus]
gi|311294127|gb|ADP88819.1| outer membrane protein [Vibrio parahaemolyticus]
gi|311294131|gb|ADP88821.1| outer membrane protein [Vibrio parahaemolyticus]
gi|311294133|gb|ADP88822.1| outer membrane protein [Vibrio parahaemolyticus]
Length = 182
Score = 42.9 bits (99), Expect = 0.014, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 51/140 (36%), Gaps = 4/140 (2%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
++ + N D I + + + S + + Y + +
Sbjct: 43 LASVINEDLSIVQDEKIEKVEATNATESCTFDKNSMSLVLHYDTNEHYLTNVHKQAISKY 102
Query: 78 ----KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
D L+EGH D++GS+ + +L LRRA Y +R+ ++G+ P
Sbjct: 103 LELVNEDKRILVEGHTDDVGSQAYNKSLSLRRASTASKYLKKDLGLGNRIVEKAFGESAP 162
Query: 134 SVYGHDEDAYAKNRRAIVFL 153
++ NRR ++ +
Sbjct: 163 ICKVNENKLSGCNRRVVLTI 182
>gi|254473231|ref|ZP_05086629.1| chemotaxis MotB protein [Pseudovibrio sp. JE062]
gi|211957952|gb|EEA93154.1| chemotaxis MotB protein [Pseudovibrio sp. JE062]
Length = 286
Score = 42.9 bits (99), Expect = 0.014, Method: Composition-based stats.
Identities = 23/152 (15%), Positives = 41/152 (26%), Gaps = 10/152 (6%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
A +S+ +I+ + E + + D + S +
Sbjct: 123 FATAAVSLRQAFQEMPEITEISNNIILEETDEGLNILIVDQEGRSMYPEGSKYPYEITRR 182
Query: 68 VLSNLGSWLEKHDCDFLIEGHADE----LGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
+L+ + L K I GH + L RA G+ ++ +
Sbjct: 183 LLAKMAPVLAKLPNRVRITGHTTTGQLITSPSETGWELSADRANTARQILSEYGLPSNNI 242
Query: 124 -KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
V P A NRR + L
Sbjct: 243 HSVVGKADTEPLFPNDPYL--AANRRISILLM 272
>gi|322514054|ref|ZP_08067125.1| lipoprotein PlpD [Actinobacillus ureae ATCC 25976]
gi|322120071|gb|EFX92042.1| lipoprotein PlpD [Actinobacillus ureae ATCC 25976]
Length = 106
Score = 42.9 bits (99), Expect = 0.014, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 7/73 (9%)
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
+ G+ D LGS ++ L RRA V + V +G+ ++ YGK E A
Sbjct: 1 MAGYTDRLGSEKYNLDLSQRRANMVKSRLVQQGVI-VQINAVGYGKASQVKACDGESGQA 59
Query: 145 K------NRRAIV 151
NRR +
Sbjct: 60 LRDCLRPNRRVEI 72
>gi|322832491|ref|YP_004212518.1| OmpA/MotB domain protein [Rahnella sp. Y9602]
gi|321167692|gb|ADW73391.1| OmpA/MotB domain protein [Rahnella sp. Y9602]
Length = 367
Score = 42.9 bits (99), Expect = 0.015, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS-----RNSS 98
+ F S + P +L + L+ + GH D++ S+
Sbjct: 151 QIIDSKNRPMFQLGSAIVEPYMRDILRAIAPVLDGFPNKISLAGHTDDMPYATGERGYSN 210
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A ++ G+S + ++V G M + A NRR + +
Sbjct: 211 WELSTERANASRREMMSGGLSEGKVLRVMGMGSSMQLK--NHPAGDAINRRISILVLNKH 268
Query: 158 A 158
A
Sbjct: 269 A 269
>gi|146276382|ref|YP_001166541.1| OmpA/MotB domain-containing protein [Rhodobacter sphaeroides ATCC
17025]
gi|145554623|gb|ABP69236.1| OmpA/MotB domain protein [Rhodobacter sphaeroides ATCC 17025]
Length = 730
Score = 42.9 bits (99), Expect = 0.015, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 8/110 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-----FLIEGHADELGSRNSSIALGLR 104
D + F T S +I P + L+ LG + + FLIEGH D +G S++AL R
Sbjct: 613 DQITFATGSAAIDPGQAERLAVLGQTIADMVAERPGEVFLIEGHTDAVGDEASNLALSDR 672
Query: 105 RAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA +V M V YG+ + + +NRR V L
Sbjct: 673 RAESVALALSEYFDVPPENMVVQGYGEGDLRIDTDGPE--QRNRRVAVRL 720
>gi|116750906|ref|YP_847593.1| OmpA/MotB domain-containing protein [Syntrophobacter fumaroxidans
MPOB]
gi|116699970|gb|ABK19158.1| OmpA/MotB domain protein [Syntrophobacter fumaroxidans MPOB]
Length = 522
Score = 42.9 bits (99), Expect = 0.015, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 40/109 (36%), Gaps = 5/109 (4%)
Query: 50 DSVFFDTSSYSIRPADI-QVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
D V F + + + ++ + + +I+GH G ++ L R+ A
Sbjct: 409 DPVVFQSGTSDLSFQGKLEIDRAVERLKHYPNFRVVIKGHTGTEGDPEANKTLSRERSEA 468
Query: 109 VFNYFV-ARGISASRMKVTSYGKEMPSVYGHDEDAYAKN-R--RAIVFL 153
V Y I+ +R+ +G E P E + N R R + L
Sbjct: 469 VARYLEVTYNINPNRLLPVGFGGEKPLPRNPGESTRSYNYRLPRVEMVL 517
>gi|121611336|ref|YP_999143.1| OmpA/MotB domain-containing protein [Verminephrobacter eiseniae
EF01-2]
gi|121555976|gb|ABM60125.1| OmpA/MotB domain protein [Verminephrobacter eiseniae EF01-2]
Length = 327
Score = 42.9 bits (99), Expect = 0.015, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 42/127 (33%), Gaps = 12/127 (9%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR- 95
+ + FD+ S + P +L +G+ L + GH D +
Sbjct: 160 TPDGLQIQIIDEQNRPMFDSGSARVLPHMRDILHAIGAALGGVKNRISLAGHTDAVPYGK 219
Query: 96 --------NSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKN 146
S+ L RA A V+ G+ ++ +V P D A A N
Sbjct: 220 YGPHDEPGYSNWELSADRANASRRELVSAGMPDDQLGRVVGLAASDPLAP-DDPLAPA-N 277
Query: 147 RRAIVFL 153
RR + +
Sbjct: 278 RRISITV 284
>gi|296161288|ref|ZP_06844096.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
gi|295888446|gb|EFG68256.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
Length = 329
Score = 42.9 bits (99), Expect = 0.015, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 52/152 (34%), Gaps = 11/152 (7%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSV---GDSVFFDTSSYSIRPADIQVLSNL 72
++ + + + + S E + + F + S ++P +L+ +
Sbjct: 140 AKLTALIEQSPALKAFKDQIRISITNEGLRIEIVDSQNRPMFPSGSSKLQPYAETILTQI 199
Query: 73 GSWLEKHDCDFLIEGHADELGSR-----NSSIALGLRRAYAVFNYFVARGISASRM-KVT 126
G+ L D I GH D + S+ L RA A VA G+ ++ +V
Sbjct: 200 GAALNDVDNRISIAGHTDAVPYTAGPEGYSNWELSSERANAARRALVAGGMHGEKLLQVR 259
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
+P + NRR + + A
Sbjct: 260 GLADVLPL--NSNIADEPTNRRISILVLNKAA 289
>gi|316936147|ref|YP_004111129.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
DX-1]
gi|315603861|gb|ADU46396.1| OmpA/MotB domain protein [Rhodopseudomonas palustris DX-1]
Length = 216
Score = 42.9 bits (99), Expect = 0.015, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 39/105 (37%), Gaps = 6/105 (5%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGLRRAYA 108
+ F+ +S +I + LG L D F++ GH D +G + L RRA
Sbjct: 104 ITFEYNSANISRQAAPAVEALGKALSSPDLKGATFVVAGHTDSVGGEGFNQELSERRADT 163
Query: 109 VFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ V + A + YG+ H + NRR V
Sbjct: 164 IKRVLVEKYDIAGADLVTVGYGESRLKDPAHPDSG--VNRRVQVV 206
>gi|15600146|ref|NP_253640.1| flagellar motor protein MotB [Pseudomonas aeruginosa PAO1]
gi|107104052|ref|ZP_01367970.1| hypothetical protein PaerPA_01005125 [Pseudomonas aeruginosa PACS2]
gi|116053102|ref|YP_793421.1| flagellar motor protein MotB [Pseudomonas aeruginosa UCBPP-PA14]
gi|218894048|ref|YP_002442917.1| flagellar motor protein MotB [Pseudomonas aeruginosa LESB58]
gi|254238332|ref|ZP_04931655.1| chemotaxis protein MotB [Pseudomonas aeruginosa C3719]
gi|254244159|ref|ZP_04937481.1| chemotaxis protein MotB [Pseudomonas aeruginosa 2192]
gi|313109955|ref|ZP_07795882.1| chemotaxis protein MotB [Pseudomonas aeruginosa 39016]
gi|9951234|gb|AAG08338.1|AE004908_4 chemotaxis protein MotB [Pseudomonas aeruginosa PAO1]
gi|115588323|gb|ABJ14338.1| chemotaxis protein MotB [Pseudomonas aeruginosa UCBPP-PA14]
gi|126170263|gb|EAZ55774.1| chemotaxis protein MotB [Pseudomonas aeruginosa C3719]
gi|126197537|gb|EAZ61600.1| chemotaxis protein MotB [Pseudomonas aeruginosa 2192]
gi|218774276|emb|CAW30093.1| chemotaxis protein MotB [Pseudomonas aeruginosa LESB58]
gi|310882384|gb|EFQ40978.1| chemotaxis protein MotB [Pseudomonas aeruginosa 39016]
Length = 347
Score = 42.9 bits (99), Expect = 0.016, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 37/120 (30%), Gaps = 7/120 (5%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ FD S ++P +L + + + I GH D +
Sbjct: 165 QIVDAANRPMFDLGSARLQPYFEDILLAMAETIRQVPNKISISGHTDAKPYAGNGDFGNW 224
Query: 100 ALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
L RA A VA G ++ +V Y D NRR + + +A
Sbjct: 225 ELSANRANAARRALVAGGYPEGQIAQVVGYASAR-LFDDKDPLN-PVNRRIDIVVLTRKA 282
>gi|296391793|ref|ZP_06881268.1| flagellar motor protein MotB [Pseudomonas aeruginosa PAb1]
Length = 347
Score = 42.9 bits (99), Expect = 0.016, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 37/120 (30%), Gaps = 7/120 (5%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ FD S ++P +L + + + I GH D +
Sbjct: 165 QIVDAANRPMFDLGSARLQPYFEDILLAMAETIRQVPNKISISGHTDAKPYAGNGDFGNW 224
Query: 100 ALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
L RA A VA G ++ +V Y D NRR + + +A
Sbjct: 225 ELSANRANAARRALVAGGYPEGQIAQVVGYASAR-LFDDKDPLN-PVNRRIDIVVLTRKA 282
>gi|294083749|ref|YP_003550506.1| OmpA/MotB domain-containing protein [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292663321|gb|ADE38422.1| OmpA/MotB domain protein [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 270
Score = 42.9 bits (99), Expect = 0.016, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V++YGK P A NRR + L
Sbjct: 215 FAVSAYGKTRPIDTNSTSSGKANNRRIDIRL 245
>gi|218679468|ref|ZP_03527365.1| OmpA/MotB domain protein [Rhizobium etli CIAT 894]
Length = 33
Score = 42.9 bits (99), Expect = 0.016, Method: Composition-based stats.
Identities = 6/22 (27%), Positives = 9/22 (40%)
Query: 132 MPSVYGHDEDAYAKNRRAIVFL 153
P E A+NRR + +
Sbjct: 6 QPVASNASEAGRAQNRRVEIQI 27
>gi|34497482|ref|NP_901697.1| flagellar motor protein MotB [Chromobacterium violaceum ATCC 12472]
gi|34103337|gb|AAQ59699.1| chemotaxis motB protein [Chromobacterium violaceum ATCC 12472]
Length = 306
Score = 42.9 bits (99), Expect = 0.016, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 39/118 (33%), Gaps = 12/118 (10%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ FD+ S + P +L L L + I GH D S+
Sbjct: 153 QIVDEQNRPMFDSGSSRMLPHTRVLLQQLAPELNQLPNRISISGHTDAKPFGGGQGGYSN 212
Query: 99 IALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGH--DEDAYAKNRRAIVFL 153
L RA VA G++ +++ +V P + + NRR + +
Sbjct: 213 WELSADRANTARRELVAGGLTENKILRVVGLASANPLIKSDVFSPE----NRRITIVV 266
>gi|319902016|ref|YP_004161744.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108]
gi|319417047|gb|ADV44158.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108]
Length = 404
Score = 42.9 bits (99), Expect = 0.017, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 48/122 (39%), Gaps = 4/122 (3%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-WLEKHDCDFLIEGHADELG 93
+ ++ + ++++F+ I + +++ + + + +LI G D G
Sbjct: 273 VVQAPPHANVLCDLFNNIYFEFDKADITEKSVSIINKIAQIMMTDTNKRYLITGCTDAKG 332
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH-DEDAYAKNRR--AI 150
S ++ L RRA AV +G+ + +K GK++ + +R+
Sbjct: 333 SLQYNMGLSQRRANAVIKALTQQGVPSEMLKSRGVGKKISYAPQDASNEIREGDRKIIVE 392
Query: 151 VF 152
+
Sbjct: 393 II 394
>gi|117924306|ref|YP_864923.1| OmpA/MotB domain-containing protein [Magnetococcus sp. MC-1]
gi|117608062|gb|ABK43517.1| OmpA/MotB domain protein [Magnetococcus sp. MC-1]
Length = 255
Score = 42.9 bits (99), Expect = 0.017, Method: Composition-based stats.
Identities = 28/183 (15%), Positives = 66/183 (36%), Gaps = 35/183 (19%)
Query: 6 IFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSS--------------VGDS 51
+F+++ +I+M++++ D + + +L++ + S G+S
Sbjct: 33 LFLVVMSISMIAVASRDEVRQNQRKDEITKVFDALEQSAAQSNLPLVINRKEQTLSFGNS 92
Query: 52 VFFDTSSYSIRPADIQVLSNLGSW--------LEKHDCDFLIEGHADELGSRNSSIALGL 103
F+ S+ + Q L + K IEG+ D++G+ ++ L +
Sbjct: 93 ARFELDSFYLSAQVRQQLKDFVPMLLKVRKKGEGKWLKRVHIEGYTDDIGTYLYNVRLSM 152
Query: 104 RRAYAVFNYFV-------ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
RA AV + R + + + + ++RR + L+
Sbjct: 153 NRAQAVLCTLMEAEVSEAQRRELQRMIIIDG------AASTSIRSSREESRRVEIRLEFL 206
Query: 157 RAN 159
R +
Sbjct: 207 RHD 209
>gi|116006769|ref|YP_787953.1| hypothetical protein pBP136_p33 [Bordetella pertussis]
gi|115500076|dbj|BAF33472.1| Upf30.5 [Bordetella pertussis]
Length = 143
Score = 42.9 bits (99), Expect = 0.017, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 51/143 (35%), Gaps = 9/143 (6%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS 70
+ +S++ + + + +++ D + ++ S S S + + L
Sbjct: 4 PVLLALSLAFLGSAQSALAAGDAGNFGTPIKSGVSVSFP-------DSSATFQPTPEALE 56
Query: 71 NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
L I G L + AL LRRA + +Y VARG+S ++ V
Sbjct: 57 LLADARNA--AIIYISGRTSTLRPSAADEALALRRALSARSYLVARGVSPLKIMVNFASA 114
Query: 131 EMPSVYGHDEDAYAKNRRAIVFL 153
+ +N+R + +
Sbjct: 115 ADFVADNSTAEGRRENQRVDIEV 137
>gi|119714995|ref|YP_921960.1| OmpA/MotB domain-containing protein [Nocardioides sp. JS614]
gi|119535656|gb|ABL80273.1| OmpA/MotB domain protein [Nocardioides sp. JS614]
Length = 302
Score = 42.9 bits (99), Expect = 0.017, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 41/128 (32%), Gaps = 5/128 (3%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
V + S V V F+ + +V+ L L I+GH +
Sbjct: 148 AKDVQATIDDRGLVVSLVSRHVVFEPDIAQLSARGERVVDTLSRVLRDVPNALRIDGHTN 207
Query: 91 E----LGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAK 145
+ + L RA V G R+ ++++G E P V +
Sbjct: 208 QEPVKPRFFATDWDLSAARAVTVLRRLNEHGDVPKKRLSLSAFGNERPLVDPATPGSQEI 267
Query: 146 NRRAIVFL 153
N+R + +
Sbjct: 268 NKRVDIVV 275
>gi|213023658|ref|ZP_03338105.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 67
Score = 42.5 bits (98), Expect = 0.017, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 24/57 (42%), Gaps = 9/57 (15%)
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDE---------DAYAKNRRAIVFLKGCR 157
+Y +++GI + ++ G+ P + D A +RR + +KG +
Sbjct: 3 VDYLISKGIPSDKISARGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEVKGVK 59
>gi|154244938|ref|YP_001415896.1| OmpA/MotB domain-containing protein [Xanthobacter autotrophicus
Py2]
gi|154159023|gb|ABS66239.1| OmpA/MotB domain protein [Xanthobacter autotrophicus Py2]
Length = 296
Score = 42.5 bits (98), Expect = 0.017, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 28/79 (35%), Gaps = 9/79 (11%)
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA---------RGISASRMKVTSYGKEM 132
IEGH D G ++ L RA + VA + V+ Y
Sbjct: 176 TVFIEGHTDSTGEDGTNWQLSTERAVNTYRAIVAGAPRLRGLRNLRGEEILSVSGYASTR 235
Query: 133 PSVYGHDEDAYAKNRRAIV 151
P +A+A+NRR +
Sbjct: 236 PIDPTESREAWARNRRIDL 254
>gi|325520678|gb|EGC99724.1| outer membrane protein A [Burkholderia sp. TJI49]
Length = 74
Score = 42.5 bits (98), Expect = 0.017, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 21/59 (35%), Gaps = 7/59 (11%)
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD-------EDAYAKNRRAIVF 152
+ RRA AV V GI A R+ +G + P D +RR +
Sbjct: 1 MSQRRANAVKALLVEHGIPADRIDARGFGAQDPIAQCADTMPHDRLVACLQPDRRVEIV 59
>gi|46398713|gb|AAS92042.1| IcmN protein [Legionella pneumophila]
Length = 112
Score = 42.5 bits (98), Expect = 0.017, Method: Composition-based stats.
Identities = 17/108 (15%), Positives = 39/108 (36%), Gaps = 1/108 (0%)
Query: 48 VGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
+ S F S + A +L+ + ++ + + ++ + S AL L R+
Sbjct: 1 IPASALFXDQSPRLNWASYSLLNEVAAFLKQFRKIAITVTSYSSKYVSVKRERALTLARS 60
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
V Y ++G+ + + G + P + N R + +
Sbjct: 61 RVVSEYLWSQGVDSRIIFTQGLGSDKPITSYTLGGDRSPNARVEITFR 108
>gi|83717140|ref|YP_438356.1| chemotaxis lafU protein [Burkholderia thailandensis E264]
gi|167614802|ref|ZP_02383437.1| Chemotaxis lafU protein [Burkholderia thailandensis Bt4]
gi|257141387|ref|ZP_05589649.1| chemotaxis lafU protein [Burkholderia thailandensis E264]
gi|83650965|gb|ABC35029.1| Chemotaxis lafU protein [Burkholderia thailandensis E264]
Length = 311
Score = 42.5 bits (98), Expect = 0.017, Method: Composition-based stats.
Identities = 29/151 (19%), Positives = 57/151 (37%), Gaps = 11/151 (7%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLG 73
+++ + D + + + ++ D F+ S ++ P +++L+ L
Sbjct: 119 ALAARIMDEASRLGMDGNVATAINDDGVRITIHDSDKQGMFERRSDALNPQFVRLLTALV 178
Query: 74 SWLEKHDCDFLIEGHADELGS-----RNSSIALGLRRAYAVFNYFVARGISASRM-KVTS 127
L +I GH D +++ L RRA G+ RM +++
Sbjct: 179 PVLGTVTNKMVIVGHTDATQYADTSVFSNNWNLSSRRALRARQILADGGMDVQRMFQISG 238
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
G +P+V D + NRR + L RA
Sbjct: 239 MGDSVPAVP--DNPNHDMNRRVELLLLTSRA 267
>gi|307261911|ref|ZP_07543571.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|306868382|gb|EFN00199.1| Outer membrane protein P5 [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
Length = 339
Score = 42.5 bits (98), Expect = 0.017, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
+ V FD S++PA L + + + G+ D +G S++ L
Sbjct: 242 AFSSDVLFDFGKSSLKPAAATALDAANTEIANLGLATPAIQVNGYTDRIGKEASNLKLSQ 301
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
RRA V NY V++G + + + YG+ P
Sbjct: 302 RRAETVANYLVSKGQNPANVTAVGYGEANPV 332
>gi|167643943|ref|YP_001672041.1| hypothetical protein pTer331_15 [Collimonas fungivorans]
gi|166863235|gb|ABZ01491.1| hypothetical protein [Collimonas fungivorans Ter331]
Length = 186
Score = 42.5 bits (98), Expect = 0.017, Method: Composition-based stats.
Identities = 22/150 (14%), Positives = 45/150 (30%), Gaps = 12/150 (8%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIR---PAD 65
+++ ++ S + + S SV F ++ +
Sbjct: 41 VIALRAQLAQSEEKLRVEQARPVIAPAVLQPAPPPPARSRTFSVHFPYNNTNFHLSADDS 100
Query: 66 IQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
Q+L L + G D + + L RA A + + +G+S + + V
Sbjct: 101 AQLLPLLAK-----ARRIEVRGRTDGQRPSTADEKIALNRALAAQRFLIGQGVSPAIISV 155
Query: 126 --TSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S G + NRR + +
Sbjct: 156 NYVSAGDY--VADNFSAVGRSLNRRVDIEV 183
>gi|163756036|ref|ZP_02163152.1| OmpA/MotB [Kordia algicida OT-1]
gi|161323910|gb|EDP95243.1| OmpA/MotB [Kordia algicida OT-1]
Length = 277
Score = 42.5 bits (98), Expect = 0.018, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 45/113 (39%), Gaps = 10/113 (8%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGH--------ADELGSRNSSIAL 101
+ F T ++ + + L L + + + ++GH +D L S + L
Sbjct: 162 KINFKTGRVTLIKSSKKELEKLVRFLKKNRNIHIEVQGHVCCGGDDDSDALNSETGTETL 221
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPS-VYGHDEDAYAKNRRAIVFL 153
+ RA ++ Y ++RGIS R+ Y + P + NRR + +
Sbjct: 222 SVDRARFIYKYLISRGISKERLTYKGYAFKAPLRFPEKGSRDRSANRRVEIEI 274
>gi|163784522|ref|ZP_02179384.1| flagellar motor protein MotB-like protein [Hydrogenivirga sp.
128-5-R1-1]
gi|159880208|gb|EDP73850.1| flagellar motor protein MotB-like protein [Hydrogenivirga sp.
128-5-R1-1]
Length = 234
Score = 42.5 bits (98), Expect = 0.018, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 48/124 (38%), Gaps = 9/124 (7%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC---DFLIEGHADELGS- 94
S++ + + + F SY + + L+ + ++K+ + + GHA
Sbjct: 97 SIENYVLIRLFNDIAFKEDSYQLTDEAKKALNEIAKKIKKYSGYFDEIRVVGHAYVKNKS 156
Query: 95 -----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
+ L ++RA + + + GI ++ + +YG + P + N R
Sbjct: 157 KLPRGIKDAWDLSIKRAEVIADILIKNGIKKDKIVLEAYGNKKPIYRWKNPILQRMNDRV 216
Query: 150 IVFL 153
++L
Sbjct: 217 EIYL 220
>gi|145297473|ref|YP_001140314.1| LafU [Aeromonas salmonicida subsp. salmonicida A449]
gi|22758827|gb|AAN04225.1| LafU [Aeromonas salmonicida]
gi|142850245|gb|ABO88566.1| LafU [Aeromonas salmonicida subsp. salmonicida A449]
Length = 315
Score = 42.5 bits (98), Expect = 0.018, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 41/113 (36%), Gaps = 6/113 (5%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG---SRNSSIALGLRRA 106
+ + S I P +L L ++ + +I GH D S+ L RA
Sbjct: 177 EREMYSRGSARISPFFRHMLMALAPIFQRVENRVMISGHTDSTPFAGDNYSNWELSSDRA 236
Query: 107 YAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
+A G+ R+ +V + M D ++NRR + + +A
Sbjct: 237 MMARRVLLAGGMPPERVGQVVAMSDTM-LENTADPRG-SENRRIELLVMTSQA 287
>gi|327402295|ref|YP_004343133.1| hypothetical protein Fluta_0286 [Fluviicola taffensis DSM 16823]
gi|327317803|gb|AEA42295.1| hypothetical protein Fluta_0286 [Fluviicola taffensis DSM 16823]
Length = 190
Score = 42.5 bits (98), Expect = 0.018, Method: Composition-based stats.
Identities = 20/103 (19%), Positives = 38/103 (36%), Gaps = 12/103 (11%)
Query: 65 DIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
IQ+ S + + + I H D G+ ++ L R + V + V R + S++
Sbjct: 87 SIQLDSVVLFLQQNKNVSVEIGVHTDCRGNDTMNLKLTQRHSEYVKYFLVKRCVPESQIV 146
Query: 125 VTSYGKEMPSVYGH-------DEDAYAK-----NRRAIVFLKG 155
YG+ + A+ + NRR + + G
Sbjct: 147 AKGYGETEWIISEEEINKYRKTNKAHYEKLHVINRRTELKIIG 189
>gi|325286811|ref|YP_004262601.1| OmpA/MotB domain-containing protein [Cellulophaga lytica DSM 7489]
gi|324322265|gb|ADY29730.1| OmpA/MotB domain protein [Cellulophaga lytica DSM 7489]
Length = 643
Score = 42.5 bits (98), Expect = 0.018, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 54/148 (36%), Gaps = 7/148 (4%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN-LGSW 75
+ + N D + +E S + F T S + P I+ L +
Sbjct: 493 TAEELKNKKQTPIYLDFADDFVVEKEGKSMLKLNKFIFKTKSSKLTPDIIKELDKAITII 552
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPS 134
+ + + IE H D G +S+ + RA + Y + GI + + YG++
Sbjct: 553 KKFPEFNLQIESHTDSKGGSSSNFRISQARADNIKKYLLNNGIPSKNILYTIGYGEDHVL 612
Query: 135 VYGHD-----EDAYAKNRRAIVFLKGCR 157
+ + +A+NRR + + +
Sbjct: 613 NKCVNGVYCIDYFHAENRRCNIVVLNYK 640
>gi|315125812|ref|YP_004067815.1| flagellar motor protein MotB [Pseudoalteromonas sp. SM9913]
gi|315014326|gb|ADT67664.1| flagellar motor protein MotB [Pseudoalteromonas sp. SM9913]
Length = 306
Score = 42.5 bits (98), Expect = 0.018, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 39/107 (36%), Gaps = 13/107 (12%)
Query: 46 SSVGDSVF--------FDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS--- 94
S+G + F + S ++P ++ ++G L+ + + GH D+
Sbjct: 172 ESLGQQIIIRIRENGSFPSGSAFLQPQFKPIIQDIGRLLKDVPGEITVSGHTDDFQVSNE 231
Query: 95 -RNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHD 139
++ L +RA AV + +RM V + P V
Sbjct: 232 LYINNWDLSSKRAVAVASELQKVPGFDKTRMMVVGRAETRPLVPNDS 278
>gi|257456384|ref|ZP_05621580.1| OmpA family protein [Treponema vincentii ATCC 35580]
gi|257446044|gb|EEV21091.1| OmpA family protein [Treponema vincentii ATCC 35580]
Length = 175
Score = 42.5 bits (98), Expect = 0.018, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 55/139 (39%), Gaps = 8/139 (5%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDS------VFFDTSSYSIRPADIQVLSNLGS 74
+T + T E + ++Q + ++ V+F +Y+I L +
Sbjct: 35 TQQAETAPAEEKTAEPEKAPEQQPQRNTNNNAGTETTVYFAPKTYTIDTFTAHKLDGIAE 94
Query: 75 WLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEM 132
L+ D I GH ++ S L L+RA AV YF + G +A M V + G +
Sbjct: 95 QLKAKDVTQIKIVGHCAKMDSTKDEEKLSLQRALAVARYFESTGAFTADNMTVAAEGAQH 154
Query: 133 PSVYGHDEDAYAKNRRAIV 151
P+ + NRR +
Sbjct: 155 PAGSHAEISERKHNRRVEI 173
>gi|269123085|ref|YP_003305662.1| YadA domain-containing protein [Streptobacillus moniliformis DSM
12112]
gi|268314411|gb|ACZ00785.1| YadA domain protein [Streptobacillus moniliformis DSM 12112]
Length = 2075
Score = 42.5 bits (98), Expect = 0.018, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 41/105 (39%), Gaps = 4/105 (3%)
Query: 54 FDTSSYSIRPADIQVLSNLGS--WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
+ + + + ++L N+ + I G+ D + N ++ LGL+RA V
Sbjct: 1971 YRLGIHELTKSQEEMLKNIVRELNENYKNRKIYITGYTDNVSGENLNLELGLKRANVVAK 2030
Query: 112 YFVAR--GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+S S KV+S G + + NRR + L+
Sbjct: 2031 KLRELGLDMSISIRKVSSSGYNNIVETNKSSNGRSSNRRVEIELR 2075
>gi|83648072|ref|YP_436507.1| nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein
[Hahella chejuensis KCTC 2396]
gi|83636115|gb|ABC32082.1| ABC-type nitrate/sulfonate/bicarbonate transport system,
periplasmic components [Hahella chejuensis KCTC 2396]
Length = 513
Score = 42.5 bits (98), Expect = 0.019, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 5/109 (4%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYA 108
+ F + + + + + L L+ + I GH G ++ L L RA A
Sbjct: 400 RPIIFASGTSELTLEGKREVDLLMENLQHYPNFRVEIRGHTGVRGDAEANKQLSLDRAEA 459
Query: 109 VFNYFV-ARGISASRMKVTSYGKEMPSVYGHDEDAYAKN-R--RAIVFL 153
V+ Y + +R + +G E P +E A N R R + L
Sbjct: 460 VYRYIEVTYEVDPNRFRFVGFGGEKPLPQLPNESLRAYNYRLPRVEIVL 508
>gi|126443721|ref|YP_001061208.1| chemotaxis LafU protein [Burkholderia pseudomallei 668]
gi|126223212|gb|ABN86717.1| chemotaxis LafU protein [Burkholderia pseudomallei 668]
Length = 311
Score = 42.5 bits (98), Expect = 0.019, Method: Composition-based stats.
Identities = 33/154 (21%), Positives = 60/154 (38%), Gaps = 12/154 (7%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLG 73
+++ + D + + + ++ D F+ S ++ P I++L+ L
Sbjct: 119 ALAARIMDEASRLGMDGNVATAINDDGVRITIHDSDKQGMFERRSDALNPPFIRLLTALV 178
Query: 74 SWLEKHDCDFLIEGHADELGS-----RNSSIALGLRRAYAVFNYFVARGISASRM-KVTS 127
L +I GH D +++ L RRA G+ A RM +++
Sbjct: 179 PVLGTVTNKMVIVGHTDATQYADASVFSNNWNLSSRRALRARQVLADGGMDAQRMFQISG 238
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA-NT 160
G +P+V D + NRR + L RA NT
Sbjct: 239 MGDSVPAVP--DNPNHDMNRRVELLLLTSRAENT 270
>gi|197337147|ref|YP_002158389.1| OmpA family protein [Vibrio fischeri MJ11]
gi|197314399|gb|ACH63848.1| OmpA family protein [Vibrio fischeri MJ11]
Length = 1590
Score = 42.5 bits (98), Expect = 0.019, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 41/109 (37%), Gaps = 10/109 (9%)
Query: 52 VFFDTSS--YSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
V F+ + + ++ D +IEGH ++G+ ++ L +RA V
Sbjct: 631 VVFEFDKKTADTSMVRQGIAEIVSFLEKQPDVHIVIEGHTCQVGTNQYNMNLSQQRAQNV 690
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYG------HDEDAYAKNRRAIVF 152
+ F + ++ V ++G+ P V D NRR +
Sbjct: 691 ADLFPKKLQE--KITVIAFGETQPLVEATGREVSSDNLKLKVNRRVKIK 737
>gi|167626173|ref|YP_001676467.1| OmpA/MotB domain-containing protein [Shewanella halifaxensis
HAW-EB4]
gi|167356195|gb|ABZ78808.1| OmpA/MotB domain protein [Shewanella halifaxensis HAW-EB4]
Length = 336
Score = 42.5 bits (98), Expect = 0.019, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 48/137 (35%), Gaps = 9/137 (6%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI 85
S + + + + D+V F S ++P +L LG L + + I
Sbjct: 158 VSMSANVELQVVPQGVRILMHDNVNQFMFTRGSADMKPYFEDLLMALGPLLSQVENKITI 217
Query: 86 EGHADELGS---RNSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDED 141
GH D + ++ L +RA G+ + ++VT + P V
Sbjct: 218 SGHTDSSPYAGKKFTNWELSSKRALLARRVLEYGGLRRHQVIQVTGMADQAPYVIKDPAA 277
Query: 142 AYAKNRRAIVFLKGCRA 158
A NRR V + A
Sbjct: 278 --AANRRIEVLVMTSDA 292
>gi|157373190|ref|YP_001471790.1| OmpA/MotB [Shewanella sediminis HAW-EB3]
gi|157315564|gb|ABV34662.1| OmpA/MotB [Shewanella sediminis HAW-EB3]
Length = 336
Score = 42.5 bits (98), Expect = 0.020, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 45/128 (35%), Gaps = 9/128 (7%)
Query: 38 SSLQEQFSSSVGDSVF---FDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+ + + D+V F S +++P +L LG L + I GH D
Sbjct: 167 KVVPQGVRILIHDNVHQFMFTRGSSNMKPYFEDLLMALGPLLGGVENKISISGHTDSTPY 226
Query: 95 ---RNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAI 150
++ L +RA G+ ++ +VT + P + A NRR
Sbjct: 227 AGKTFTNWELSSKRALLARRVLEYGGVKRHQIIQVTGMADQSPYIQNDPAA--AANRRIE 284
Query: 151 VFLKGCRA 158
+ + A
Sbjct: 285 MLVLTTSA 292
>gi|134280878|ref|ZP_01767588.1| chemotaxis LafU protein [Burkholderia pseudomallei 305]
gi|254182925|ref|ZP_04889518.1| lateral flagellar motor protein B [Burkholderia pseudomallei 1655]
gi|254299720|ref|ZP_04967169.1| lateral flagellar motor protein B [Burkholderia pseudomallei 406e]
gi|125657184|gb|ABN48672.1| chemotaxis LafU protein [Burkholderia pseudomallei]
gi|134247900|gb|EBA47984.1| chemotaxis LafU protein [Burkholderia pseudomallei 305]
gi|157809631|gb|EDO86801.1| lateral flagellar motor protein B [Burkholderia pseudomallei 406e]
gi|184213459|gb|EDU10502.1| lateral flagellar motor protein B [Burkholderia pseudomallei 1655]
Length = 311
Score = 42.5 bits (98), Expect = 0.020, Method: Composition-based stats.
Identities = 31/151 (20%), Positives = 58/151 (38%), Gaps = 11/151 (7%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLG 73
+++ + D + + + ++ D F+ S ++ P I++L+ L
Sbjct: 119 ALAARIMDEASRLGMDGNVATAINDDGVRITIHDSDKQGMFERRSDALNPPFIRLLTALV 178
Query: 74 SWLEKHDCDFLIEGHADELGS-----RNSSIALGLRRAYAVFNYFVARGISASRM-KVTS 127
L +I GH D +++ L RRA G+ A RM +++
Sbjct: 179 PVLGTVTNKMVIVGHTDATQYADASVFSNNWNLSSRRALRARQVLADGGMDAQRMFQISG 238
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
G +P+V D + NRR + L RA
Sbjct: 239 MGDSVPAVP--DNPNHDMNRRVELLLLTSRA 267
>gi|311294129|gb|ADP88820.1| outer membrane protein [Vibrio parahaemolyticus]
gi|311294135|gb|ADP88823.1| outer membrane protein [Vibrio parahaemolyticus]
Length = 182
Score = 42.5 bits (98), Expect = 0.020, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 51/140 (36%), Gaps = 4/140 (2%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
++ + N D I + + + S + + Y + +
Sbjct: 43 LASVINEDLSIVQDEKIEKVEATNATESCTFDKNSMSLVLHYDTNEHHLTNVHKQAISKY 102
Query: 78 ----KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
D L+EGH D++GS+ + +L LRRA Y +R+ ++G+ P
Sbjct: 103 LELVNEDKRILVEGHTDDVGSQAYNKSLSLRRASTASKYLKKDLGLGNRIVEKAFGESAP 162
Query: 134 SVYGHDEDAYAKNRRAIVFL 153
++ NRR ++ +
Sbjct: 163 ICKVNENKLSGCNRRVVLTI 182
>gi|148974248|ref|ZP_01811781.1| chemotaxis LafU protein [Vibrionales bacterium SWAT-3]
gi|145965945|gb|EDK31193.1| chemotaxis LafU protein [Vibrionales bacterium SWAT-3]
Length = 324
Score = 42.5 bits (98), Expect = 0.020, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 43/112 (38%), Gaps = 8/112 (7%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG---SRNSSIALGLRRAYAV 109
F + P +L NL LE + +I GH D SR ++ L RA +
Sbjct: 157 MFFRGGAKVTPFYQDLLLNLAGLLENIENKMIITGHTDASRYKGSRMTNWELSSNRANSA 216
Query: 110 FNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRANT 160
Y G+ + +VT P Y + + NRR +++ ANT
Sbjct: 217 RYYLNKGGLQERHIFQVTGMSDTAPVDYENTKSG--INRRIELYI--LTANT 264
>gi|78484704|ref|YP_390629.1| OmpA/MotB [Thiomicrospira crunogena XCL-2]
gi|78362990|gb|ABB40955.1| OmpA/MotB family protein [Thiomicrospira crunogena XCL-2]
Length = 241
Score = 42.5 bits (98), Expect = 0.020, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 30/88 (34%), Gaps = 9/88 (10%)
Query: 72 LGSWLEKHDCDFLIEGHADELGS-----RNSSIALGLRRAYAVFNYFVARGISASRM-KV 125
+ E IEGH D S+ L RAYA+ N + +
Sbjct: 146 ITRPGESFQVTVRIEGHTDATPLAKTALYQSNFELSTFRAYAIMNVLQIYSGLPESLFSI 205
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
YG P + +KNRR ++L
Sbjct: 206 AGYGSFHPVTRNPYD---SKNRRVEIYL 230
>gi|91974956|ref|YP_567615.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
gi|91681412|gb|ABE37714.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
Length = 697
Score = 42.5 bits (98), Expect = 0.020, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 52/128 (40%), Gaps = 8/128 (6%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-----FL 84
S D + S++++ S +++ F+ S+ I P L + L + FL
Sbjct: 547 SMDEIRYSPSVRQRMPSIDLNTITFELGSWDISPDQASKLQAIADGLNRSISRNPREVFL 606
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAY 143
IEGH D G+ +++L RRA + + + YG++ V +
Sbjct: 607 IEGHTDATGNDTDNLSLSDRRAESAAALLTQQFAVPAENLTSQGYGEQYLKVQSDGPE-- 664
Query: 144 AKNRRAIV 151
+NRR V
Sbjct: 665 RQNRRVTV 672
>gi|261855636|ref|YP_003262919.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
gi|261836105|gb|ACX95872.1| OmpA/MotB domain protein [Halothiobacillus neapolitanus c2]
Length = 358
Score = 42.5 bits (98), Expect = 0.021, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 51/143 (35%), Gaps = 9/143 (6%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSV---GDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
N+D + + + ++ + + F SS + P ++L L + K
Sbjct: 145 NVDPALKAYKDQIKLDMTRDGLRIQIIDQANRPMFKISSSRLEPYAAEILKKLAPVINKL 204
Query: 80 DCDFLIEGHADELGSR---NSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSV 135
I GH D L ++ L RA A V G S++ +V +P +
Sbjct: 205 PNRLSITGHTDSLPYNGVDRTNWELSADRANAARRELVQDGYDESKLLRVVGMAAALPFI 264
Query: 136 YGHDEDAYAKNRRAIVFLKGCRA 158
+ A +NRR + + A
Sbjct: 265 P--SDPADPRNRRISIIVMNDSA 285
>gi|82940569|emb|CAJ44300.1| putative Chemotaxis Motility protein B (MotB) [Rhizobium
leguminosarum bv. viciae]
Length = 146
Score = 42.5 bits (98), Expect = 0.021, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 48/133 (36%), Gaps = 7/133 (5%)
Query: 32 DTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGH 88
L ++ + S+ D F+ S R + + +G+ L+ I GH
Sbjct: 15 AEGLTVTASEGGLLVSISDQTDDSMFNIGSAVPRQEMVLAMEKIGAILKARGGAIAIRGH 74
Query: 89 ADELG---SRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
D ++N + L + RA + + V G+ R+ S + D A
Sbjct: 75 TDGRQYKGTQNENWRLSMDRAQSAYYMLVRGGLDEKRISQVSGFADRRLKLPSDPFN-AT 133
Query: 146 NRRAIVFLKGCRA 158
NRR + ++ +
Sbjct: 134 NRRIEILVQADQG 146
>gi|31795134|ref|NP_857992.1| putative outer membrane protein [uncultured bacterium]
gi|49176934|ref|YP_025437.1| hypothetical protein pJP4_73 [Ralstonia eutropha JMP134]
gi|72384319|ref|YP_293672.1| hypothetical protein Reut_D6517 [Ralstonia eutropha JMP134]
gi|77993246|ref|YP_358836.1| putative outer membrane protein [IncP-1beta multiresistance plasmid
pB8]
gi|84310702|ref|YP_447032.1| hypothetical protein pTP6_37 [uncultured bacterium]
gi|115345512|ref|YP_771697.1| hypothetical protein Bamb_6620 [Burkholderia ambifaria AMMD]
gi|121582564|ref|YP_974093.1| hypothetical protein Ajs_4259 [Acidovorax sp. JS42]
gi|319765131|ref|YP_004129067.1| hypothetical protein Alide_4488 [Alicycliphilus denitrificans BC]
gi|13661673|gb|AAK38017.1| Upf30.5 [Comamonas testosteroni]
gi|31746378|emb|CAD97503.1| putative outer membrane protein [uncultured bacterium]
gi|39777514|gb|AAR31089.1| Upf30.5 [Ralstonia eutropha JMP134]
gi|72123672|gb|AAZ65815.1| hypothetical protein Reut_D6517 [Ralstonia eutropha JMP134]
gi|77733999|emb|CAI10763.1| putative outer membrane protein [IncP-1beta multiresistance plasmid
pB8]
gi|84094982|emb|CAJ15604.1| Upf30.5 protein [uncultured bacterium]
gi|89211885|gb|ABD63300.1| Upf30.5 [Proteus mirabilis]
gi|89211891|gb|ABD63305.1| Upf30.5 [Bordetella bronchiseptica]
gi|115286689|gb|ABI92163.1| conserved hypothetical protein [Burkholderia ambifaria AMMD]
gi|120608620|gb|ABM44358.1| conserved hypothetical protein [Acidovorax sp. JS42]
gi|317119818|gb|ADV02305.1| hypothetical protein Alide_4488 [Alicycliphilus denitrificans BC]
Length = 143
Score = 42.5 bits (98), Expect = 0.021, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 51/150 (34%), Gaps = 15/150 (10%)
Query: 4 STIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRP 63
+ + LS ++S + +++ D + ++ S S S +
Sbjct: 3 KPVLLALSLAFLVSA------QSALAAGDAGNFGTPIKSGVSVSFP-------DSSATFQ 49
Query: 64 ADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
+ L L I G L + AL LRRA + +Y VARG+S ++
Sbjct: 50 PTPEALELLADARNA--AIIYISGRTSTLRPSAADEALALRRALSARSYLVARGVSPLKI 107
Query: 124 KVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V + +N+R + +
Sbjct: 108 MVNFASAADFVADNSTAEGRRENQRVDIEV 137
>gi|331699296|ref|YP_004335535.1| OmpA/MotB domain-containing protein [Pseudonocardia dioxanivorans
CB1190]
gi|326953985|gb|AEA27682.1| OmpA/MotB domain protein [Pseudonocardia dioxanivorans CB1190]
Length = 222
Score = 42.5 bits (98), Expect = 0.021, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 48/142 (33%), Gaps = 8/142 (5%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
+ + ++ + E + V F S + A + ++
Sbjct: 84 VAGVAGVRSVEAAPGVPDGLPAPAPPGAAAELAALVAAAPVTFAADSAVLDGAAAETVAG 143
Query: 72 LGSW-LEKHDCDFLIEGHA-DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
+G W + D + GHA D G ++AL +RA AV A G+ SR+ G
Sbjct: 144 VGRWLVAHPDVRVRLTGHAADTPGPAEVALALSQQRAQAVAEALRANGVDPSRVSARGVG 203
Query: 130 KEMPSVYGHDEDAYAKNRRAIV 151
P A +RR +
Sbjct: 204 DADPL---PTP---AASRRVEI 219
>gi|221134028|ref|ZP_03560333.1| outer membrane protein [Glaciecola sp. HTCC2999]
Length = 249
Score = 42.5 bits (98), Expect = 0.021, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 44/107 (41%), Gaps = 1/107 (0%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLR 104
+ + F T + A L+ L ++ + G AD G+ + ++AL
Sbjct: 131 PEMQSHIQFTTGISEVASAYHGQLALLAQVLTKQPQLQVTLTGFADLRGTDDDNLALSSA 190
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
R AV + V G+S ++K + G+ + +++ +RR +
Sbjct: 191 RVAAVKSMLVKEGVSEDQIKTIALGEARALQTSNWDESLVFDRRVTI 237
>gi|311294121|gb|ADP88816.1| outer membrane protein [Vibrio parahaemolyticus]
Length = 182
Score = 42.1 bits (97), Expect = 0.023, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 51/140 (36%), Gaps = 4/140 (2%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
++ + N D I + + + S + + Y + +
Sbjct: 43 LASVINEDLSIVQDEKIEKVEATNATESCTFDKNSMSLVLHYGTNEHYLTNVHKQAISKY 102
Query: 78 ----KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
D L+EGH D++GS+ + +L LRRA Y +R+ ++G+ P
Sbjct: 103 LELVNEDKRILVEGHTDDVGSQAYNKSLSLRRASTASKYLKKDLGLGNRIVEKAFGESAP 162
Query: 134 SVYGHDEDAYAKNRRAIVFL 153
++ NRR ++ +
Sbjct: 163 ICKVNENKLSGCNRRVVLTI 182
>gi|316933944|ref|YP_004108926.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
DX-1]
gi|315601658|gb|ADU44193.1| OmpA/MotB domain protein [Rhodopseudomonas palustris DX-1]
Length = 284
Score = 42.1 bits (97), Expect = 0.023, Method: Composition-based stats.
Identities = 25/151 (16%), Positives = 46/151 (30%), Gaps = 9/151 (5%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
A+ S+ +++ + + + D F S +
Sbjct: 124 FALASASLRQALQDVPELTEMSRNVIFEETPVGLNLELTDQDGRPMFADGSAIPYERTRK 183
Query: 68 VLSNLGSWLEKHDCDFLIEGHADELGSRNSSIA---LGLRRAYAVFNYFVARGISASR-M 123
+++ L + L I GH + L + RA AV +G+ S+ +
Sbjct: 184 LVARLAAPLRATSLRISIVGHTAATLMQVDDDDPLSLSINRANAVREILKQQGLPTSQVL 243
Query: 124 KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ G P D A NRR + L
Sbjct: 244 SLVGKGDGDPLFP--DAPMLAANRRVTITLM 272
>gi|327482425|gb|AEA85735.1| flagellar motor protein MotB [Pseudomonas stutzeri DSM 4166]
Length = 337
Score = 42.1 bits (97), Expect = 0.023, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 37/129 (28%), Gaps = 10/129 (7%)
Query: 38 SSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
Q+ + D F S ++P +L L + I GH D
Sbjct: 147 EITQDGLRIQIMDAENRPMFALGSAQLQPYFEDILLALVETIAAVPNKISISGHTDAKPF 206
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRA 149
+ L RA A V G ++ +V Y D NRR
Sbjct: 207 SGRGDFGNWELSASRANAARRTLVYGGYPEEQIARVVGYASSA-LFDRKDPFN-PVNRRI 264
Query: 150 IVFLKGCRA 158
+ + +A
Sbjct: 265 DILVLTKKA 273
>gi|327193053|gb|EGE59965.1| chemotaxis motility protein [Rhizobium etli CNPAF512]
Length = 440
Score = 42.1 bits (97), Expect = 0.023, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 41/109 (37%), Gaps = 4/109 (3%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS---RNSSIALGLRR 105
D F+ S R + + +G+ L++ I GH D +N + L + R
Sbjct: 331 NDDSMFNIGSAVPRQEMVLAMERIGTILKERGGAVAIRGHTDGRQYKGGQNENWRLSMDR 390
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
A + + V G+ R+ S + D A NRR + ++
Sbjct: 391 AQSAYYMLVRGGLDEKRISQVSGFADRRLKLPADPFN-AANRRIEILVQ 438
>gi|190890377|ref|YP_001976919.1| chemotaxis motility protein [Rhizobium etli CIAT 652]
gi|190695656|gb|ACE89741.1| chemotaxis motility protein [Rhizobium etli CIAT 652]
Length = 440
Score = 42.1 bits (97), Expect = 0.023, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 41/109 (37%), Gaps = 4/109 (3%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS---RNSSIALGLRR 105
D F+ S R + + +G+ L++ I GH D +N + L + R
Sbjct: 331 NDDSMFNIGSAVPRQEMVLAMERIGTILKERGGAVAIRGHTDGRQYKGGQNENWRLSMDR 390
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
A + + V G+ R+ S + D A NRR + ++
Sbjct: 391 AQSAYYMLVRGGLDEKRISQVSGFADRRLKLPADPFN-AANRRIEILVQ 438
>gi|306845321|ref|ZP_07477896.1| lipoprotein [Brucella sp. BO1]
gi|306274237|gb|EFM56049.1| lipoprotein [Brucella sp. BO1]
Length = 129
Score = 42.1 bits (97), Expect = 0.023, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 41/137 (29%), Gaps = 17/137 (12%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ ++ T+ ++ S V + + +L +
Sbjct: 2 QVFPQEPTAQATMWPARPPKQTVSVYFPQDVTVFRPTSAQINQLHTLLWPV-------PK 54
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK-----VTSYGKEMPSVY 136
+ G D + RA A++N+ + +G+ ASR+ V Y P
Sbjct: 55 HINVRGLTDNNCPTPGDTQVARVRALAIYNWLINQGVPASRITISYAPVKDYASNAPLSP 114
Query: 137 GHDEDAYAKNRRAIVFL 153
NRR + +
Sbjct: 115 -----GRVLNRRVDIEI 126
>gi|332877840|ref|ZP_08445578.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332684135|gb|EGJ56994.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 362
Score = 42.1 bits (97), Expect = 0.023, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 53/132 (40%), Gaps = 10/132 (7%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDF 83
K E +++ + ++VFF +S IR ++ + L ++
Sbjct: 236 PEKREPVTPKKAEPVVEKAKVEKLQENVFFKLNSAVIRASEEAKIERLAAYLTANPQAKV 295
Query: 84 LIEGHAD-ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE-MPSVYGHDED 141
+I G+AD G+ + AL L+RA AV + I A R++V G P E
Sbjct: 296 VICGYADKATGTPKINDALSLKRAQAVSKALQVKKIDAGRIRVEHKGDSVQPF----TEV 351
Query: 142 AYAKNRRAIVFL 153
KN R + +
Sbjct: 352 --EKN-RVSICI 360
>gi|209885628|ref|YP_002289485.1| OmpA/MotB [Oligotropha carboxidovorans OM5]
gi|209873824|gb|ACI93620.1| OmpA/MotB [Oligotropha carboxidovorans OM5]
Length = 275
Score = 42.1 bits (97), Expect = 0.023, Method: Composition-based stats.
Identities = 24/151 (15%), Positives = 45/151 (29%), Gaps = 9/151 (5%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
A+ S+ +++ + + + + D F S
Sbjct: 115 FALASASLRQALQDMPEMTELSKHIMFEETKNGLNLEIVDQDGRSMFAEGSREPYERTRM 174
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISASRM- 123
++ L + L + I GH + L RA AV G+ A+ +
Sbjct: 175 LIRKLAAPLRQSPLRIAIVGHTSANVPLRPGYDAFDLSADRANAVRQILQNEGLPATHIF 234
Query: 124 KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
V+ P D+ + NRR + L
Sbjct: 235 SVSGKADTEPLFP--DDPTLSANRRVTITLM 263
>gi|171059731|ref|YP_001792080.1| OmpA/MotB domain-containing protein [Leptothrix cholodnii SP-6]
gi|170777176|gb|ACB35315.1| OmpA/MotB domain protein [Leptothrix cholodnii SP-6]
Length = 534
Score = 42.1 bits (97), Expect = 0.024, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 48/147 (32%), Gaps = 11/147 (7%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
++ + + T + + ++FDT S + L + +
Sbjct: 374 AVVATSEYARAGNDTSATFDEALERFRGYFTHEPIVIYFDTGSDQPMAGEEAKLDGIQEY 433
Query: 76 -LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMP 133
D I+G AD GS + L +RA V +A GI+A R+ G+
Sbjct: 434 LDNYPDATLGIDGFADIRGSEQFNFRLSDQRAQTVQALVLAEGIAAGRIDWAVGVGETQD 493
Query: 134 SVYGHDEDAYAK---------NRRAIV 151
A+ NRR ++
Sbjct: 494 FSQHGTAPGTAQPVDAGRLRANRRVVI 520
>gi|146284108|ref|YP_001174261.1| flagellar motor protein MotB [Pseudomonas stutzeri A1501]
gi|145572313|gb|ABP81419.1| chemotaxis protein MotB [Pseudomonas stutzeri A1501]
Length = 336
Score = 42.1 bits (97), Expect = 0.024, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 37/129 (28%), Gaps = 10/129 (7%)
Query: 38 SSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
Q+ + D F S ++P +L L + I GH D
Sbjct: 146 EITQDGLRIQIMDAENRPMFALGSAQLQPYFEDILLALVETIAAVPNKISISGHTDAKPF 205
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRA 149
+ L RA A V G ++ +V Y D NRR
Sbjct: 206 SGRGDFGNWELSASRANAARRTLVYGGYPEEQIARVVGYASSA-LFDRKDPFN-PVNRRI 263
Query: 150 IVFLKGCRA 158
+ + +A
Sbjct: 264 DILVLTKKA 272
>gi|118589971|ref|ZP_01547375.1| flagellar motor protein MotB [Stappia aggregata IAM 12614]
gi|118437468|gb|EAV44105.1| flagellar motor protein MotB [Stappia aggregata IAM 12614]
Length = 500
Score = 42.1 bits (97), Expect = 0.024, Method: Composition-based stats.
Identities = 32/156 (20%), Positives = 56/156 (35%), Gaps = 10/156 (6%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDT--SSYSIRPADI 66
+L A ++ + + ++ + + S D F S RP +
Sbjct: 348 VLVARLSEVLAQTEGTVLEETASQITVTREG-EGALISLTDDQNFGMFAIGSAEPRPELV 406
Query: 67 QVLSNLGSWLEKHDCDFLIEGHADELGSR---NSSIALGLRRAYAVFNYFVARGISASRM 123
++L +G + +I+GH D R + L RA+ G+ R
Sbjct: 407 KLLERIGKIVADTPGQIVIKGHTDARPFRSKTYDNWRLSSARAHMALYMLSRGGVGKDRF 466
Query: 124 -KVTSYGKEMPSVYGHDEDAYAKNRRAIVF-LKGCR 157
+V Y + V D A A NRR ++ L+G R
Sbjct: 467 NRVEGYADKDLKVP-SDPFA-ASNRRIEIYLLEGAR 500
>gi|330873802|gb|EGH07951.1| flagellar motor protein MotB [Pseudomonas syringae pv. morsprunorum
str. M302280PT]
Length = 341
Score = 42.1 bits (97), Expect = 0.025, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 46/142 (32%), Gaps = 10/142 (7%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ ++ + Q+ + D FD+ S ++P +L L ++
Sbjct: 135 NPQLQKFKDQILFEITQDGLRIQIMDADNRPMFDSGSARLKPYFEDILLALADTIKSVPN 194
Query: 82 DFLIEGHADELG----SRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVY 136
I GH D + + L RA A VA ++ +V + +
Sbjct: 195 KISISGHTDATPFVGNNGFGNWELSANRANAARRALVAGTYPEEQVARVVGHASSV-LYD 253
Query: 137 GHDEDAYAKNRRAIVFLKGCRA 158
+ NRR + + +A
Sbjct: 254 RDNPTG-PINRRIDIVVLTKKA 274
>gi|91977304|ref|YP_569963.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
gi|91683760|gb|ABE40062.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
Length = 286
Score = 42.1 bits (97), Expect = 0.025, Method: Composition-based stats.
Identities = 27/151 (17%), Positives = 44/151 (29%), Gaps = 10/151 (6%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
A+ S+ +++ + + + D F S
Sbjct: 125 FALASASLRQALQDVPELAEMSKNVVFEETPLGLNLELTDQEGRPMFPEGSAVPYERTRM 184
Query: 68 VLSNLGSWLEKHDCDFLIEGH----ADELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
+++ L + L I GH + L RA AV G++ASR+
Sbjct: 185 LIARLAAPLRATALRVSIVGHTAAAPVNADDEYDAFDLSTSRANAVRQVLKREGLAASRI 244
Query: 124 K-VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V G P A NRR + L
Sbjct: 245 MLVAGKGDGEPLFPE--APTLAANRRVTISL 273
>gi|326404291|ref|YP_004284373.1| chemotaxis protein MotB [Acidiphilium multivorum AIU301]
gi|325051153|dbj|BAJ81491.1| chemotaxis protein MotB [Acidiphilium multivorum AIU301]
Length = 371
Score = 42.1 bits (97), Expect = 0.026, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 45/138 (32%), Gaps = 9/138 (6%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
D ++S ++ + D F S P +++L+ + L +
Sbjct: 219 AQDPDLASLSKQVSVHVTPRGLRIQIMDAHKRPMFALGSARPNPMTLELLTKIAPILSRL 278
Query: 80 DCDFLIEGHADELGS---RNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSV 135
I G+ D + L + RA A V G + +V+ Y +
Sbjct: 279 GDRIRIAGYTDARPYVAGPKDNWDLSVERANATRAVLVKAGFPKRLIARVSGYADRKLLI 338
Query: 136 YGHDEDAYAKNRRAIVFL 153
+ A A NRR + +
Sbjct: 339 P-SNPLA-AANRRVGILV 354
>gi|262197769|ref|YP_003268978.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
gi|262081116|gb|ACY17085.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
Length = 333
Score = 42.1 bits (97), Expect = 0.026, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 5/102 (4%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
++F ++S + + ++L WLE + IEGH D G ++ LG RRA +V
Sbjct: 234 LYFGSNSVRLSARNRRLLMRNVRWLEANPEASLTIEGHTDASGPAEYNLILGERRAESVQ 293
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
++ + +G+ + R+ V S G++ + AKNRR ++
Sbjct: 294 SFLIEQGVDSGRIDVVSRGEDDLKY----KSGSAKNRRVMLI 331
>gi|148260894|ref|YP_001235021.1| OmpA/MotB domain-containing protein [Acidiphilium cryptum JF-5]
gi|146402575|gb|ABQ31102.1| OmpA/MotB domain protein [Acidiphilium cryptum JF-5]
Length = 371
Score = 42.1 bits (97), Expect = 0.026, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 45/138 (32%), Gaps = 9/138 (6%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
D ++S ++ + D F S P +++L+ + L +
Sbjct: 219 AQDPDLASLSKQVSVHVTPRGLRIQIMDAHKRPMFALGSARPNPMTLELLTKIAPILSRL 278
Query: 80 DCDFLIEGHADELGS---RNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSV 135
I G+ D + L + RA A V G + +V+ Y +
Sbjct: 279 GDRIRIAGYTDARPYVAGPKDNWDLSVERANATRAVLVKAGFPKRLIARVSGYADRKLLI 338
Query: 136 YGHDEDAYAKNRRAIVFL 153
+ A A NRR + +
Sbjct: 339 P-SNPLA-AANRRVGILV 354
>gi|332669857|ref|YP_004452865.1| OmpA/MotB domain-containing protein [Cellulomonas fimi ATCC 484]
gi|332338895|gb|AEE45478.1| OmpA/MotB domain protein [Cellulomonas fimi ATCC 484]
Length = 183
Score = 42.1 bits (97), Expect = 0.026, Method: Composition-based stats.
Identities = 30/131 (22%), Positives = 47/131 (35%), Gaps = 7/131 (5%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI 85
T S ++V + + +VG V F +S+ + PA L+ L + +
Sbjct: 51 TTQGSVESVAPPETDGGTTTLTVGSDVLFAYASHDLDPAAAAALAALVEQV-PAGAQVAV 109
Query: 86 EGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG-----HDE 140
GH D G ++ L RA AV + + V G P D
Sbjct: 110 VGHTDSRGGDAVNLPLSSARAEAVAAVLRS-TRPDLVLAVGGAGSTEPVADEYVAGAPDL 168
Query: 141 DAYAKNRRAIV 151
A A+NRR +
Sbjct: 169 AAMARNRRVEL 179
>gi|73539667|ref|YP_300034.1| OmpA/MotB:SmpA/OmlA [Ralstonia eutropha JMP134]
gi|72123004|gb|AAZ65190.1| OmpA/MotB:SmpA/OmlA [Ralstonia eutropha JMP134]
Length = 292
Score = 42.1 bits (97), Expect = 0.026, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 48/149 (32%), Gaps = 11/149 (7%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS---SYSIRPADIQVLSNLGSWL 76
+P + ++++G F + + + P + LG L
Sbjct: 144 SCAAFLRYPETPAAMPAIVQTTATTTTTLGADALFTFNGSTAAELVPNGHARIDALGQQL 203
Query: 77 EKHDC--DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
+ + D LG+ + L +RA V + VA+G+ + + GK P
Sbjct: 204 AGMKMLKHVDVYAYTDRLGTDAYNKRLSQQRADTVKSLLVAQGVDSRLVTAQGMGKADPL 263
Query: 135 VYGHD------EDAYAKNRRAIVFLKGCR 157
+ A +RR + G +
Sbjct: 264 SHCGAMPRPKLITCLAPDRRVEIRTAGVK 292
>gi|237798775|ref|ZP_04587236.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331021628|gb|EGI01685.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 48
Score = 42.1 bits (97), Expect = 0.026, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+G+ P +E A+NRR V L+
Sbjct: 1 HGERYPLAPNTNEANRARNRRVNVHLE 27
>gi|163800113|ref|ZP_02194014.1| chemotaxis LafU protein [Vibrio sp. AND4]
gi|159175556|gb|EDP60350.1| chemotaxis LafU protein [Vibrio sp. AND4]
Length = 330
Score = 42.1 bits (97), Expect = 0.026, Method: Composition-based stats.
Identities = 29/153 (18%), Positives = 53/153 (34%), Gaps = 11/153 (7%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVF---FDTSSYSIRPADIQVLSN 71
+ ++ + + S +N + + + D F+ + P +L
Sbjct: 129 LALLAKVIDKVVGQISAQDNVNVTITPQGLRIVLQDDYMQHMFNRGGAELTPFFEDLLLA 188
Query: 72 LGSWLEKHDCDFLIEGHADELGSRNS-----SIALGLRRAYAVFNYFVARGISASR-MKV 125
L E+ + +I GH D + + AL RA N V G+ R M+V
Sbjct: 189 LAPVFERINNPLIISGHTDSTPFKQRVGRKSNWALSASRADVARNTLVEGGMPDDRVMQV 248
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
T +E ++NRR +F+ A
Sbjct: 249 TGMSDRALL--NREEPDSSENRRIELFILTTPA 279
>gi|10955226|ref|NP_044255.1| hypothetical protein R751p46 [Enterobacter aerogenes]
gi|1572563|gb|AAC64458.1| Upf30.5 [Enterobacter aerogenes]
Length = 142
Score = 42.1 bits (97), Expect = 0.026, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 48/150 (32%), Gaps = 16/150 (10%)
Query: 4 STIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRP 63
+ + LS ++S + D + ++ S S S +
Sbjct: 3 KPVLLALSLAFLVSA-------QSALAGDAGNFGTPIKSGVSVSFP-------DSSATFQ 48
Query: 64 ADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
+ L L I G L + AL LRRA + +Y VARG+S ++
Sbjct: 49 PTPEALELLADARNA--AIIYISGRTSTLRPSAADEALALRRALSARSYLVARGVSPLKI 106
Query: 124 KVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V + +N+R + +
Sbjct: 107 MVNFASAADFVADNSTAEGRRENQRVDIEV 136
>gi|83955101|ref|ZP_00963757.1| chemotaxis MotB protein [Sulfitobacter sp. NAS-14.1]
gi|83840430|gb|EAP79603.1| chemotaxis MotB protein [Sulfitobacter sp. NAS-14.1]
Length = 394
Score = 42.1 bits (97), Expect = 0.026, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 47/126 (37%), Gaps = 12/126 (9%)
Query: 38 SSLQEQFSSSVGDS---VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE--- 91
E + D F + ++ A Q+L+NLG L + + GH D
Sbjct: 198 QQTPEGLQIQIIDQEGQPMFYSGRAEMQGATDQLLANLGKSLARLPNKITLSGHTDAVRF 257
Query: 92 -LGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVY-GHDEDAYAKNRR 148
+ + L RA A F A G++ R+ +V+ P V + A NRR
Sbjct: 258 ANSQKYDNWDLSSDRANATRRVFEASGVARDRIIRVSGLADTAPLVPENPTD---ASNRR 314
Query: 149 AIVFLK 154
V ++
Sbjct: 315 ITVSVQ 320
>gi|83944198|ref|ZP_00956654.1| chemotaxis MotB protein [Sulfitobacter sp. EE-36]
gi|83845065|gb|EAP82946.1| chemotaxis MotB protein [Sulfitobacter sp. EE-36]
Length = 394
Score = 42.1 bits (97), Expect = 0.026, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 47/126 (37%), Gaps = 12/126 (9%)
Query: 38 SSLQEQFSSSVGDS---VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE--- 91
E + D F + ++ A Q+L+NLG L + + GH D
Sbjct: 198 QQTPEGLQIQIIDQEGQPMFYSGRAEMQGATDQLLANLGKSLARLPNKITLSGHTDAVRF 257
Query: 92 -LGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVY-GHDEDAYAKNRR 148
+ + L RA A F A G++ R+ +V+ P V + A NRR
Sbjct: 258 ANSQKYDNWDLSSDRANATRRVFEASGVARDRIIRVSGLADTAPLVPENPTD---ASNRR 314
Query: 149 AIVFLK 154
V ++
Sbjct: 315 ITVSVQ 320
>gi|332293247|ref|YP_004431856.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
gi|332171333|gb|AEE20588.1| OmpA/MotB domain protein [Krokinobacter diaphorus 4H-3-7-5]
Length = 275
Score = 42.1 bits (97), Expect = 0.027, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 5/66 (7%)
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
D +R S+ L R V++Y + GISA R+K P + KNR
Sbjct: 213 QLDGYNNRTGSMTLSEDRGKMVYDYLIKNGISAGRLKYRGKAYTEPLDWEET-----KNR 267
Query: 148 RAIVFL 153
R + +
Sbjct: 268 RVEMTI 273
>gi|218675467|ref|ZP_03525136.1| flagellar motor protein MotB [Rhizobium etli GR56]
Length = 436
Score = 42.1 bits (97), Expect = 0.027, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 41/109 (37%), Gaps = 4/109 (3%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS---RNSSIALGLRR 105
D F+ S R + + +G+ L++ I GH D +N + L + R
Sbjct: 327 NDDSMFNIGSAVPRQEMVLAMERIGTILKERGGAVAIRGHTDGRQYKGAQNENWRLSMDR 386
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
A + + V G+ R+ S + D A NRR + ++
Sbjct: 387 AQSAYYMLVRGGLDEKRISQVSGFADRRLKLPADPFN-AANRRIEILVQ 434
>gi|303252130|ref|ZP_07338298.1| lipoprotein [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|307247466|ref|ZP_07529511.1| hypothetical protein appser2_4620 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|302648913|gb|EFL79101.1| lipoprotein [Actinobacillus pleuropneumoniae serovar 2 str. 4226]
gi|306855969|gb|EFM88127.1| hypothetical protein appser2_4620 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
Length = 283
Score = 42.1 bits (97), Expect = 0.027, Method: Composition-based stats.
Identities = 21/87 (24%), Positives = 30/87 (34%), Gaps = 8/87 (9%)
Query: 73 GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
+ G+ D LGS ++ L RRA V V +G++A + YGK
Sbjct: 165 AQLKSSKAEQVKVAGYTDRLGSEKYNLDLSQRRANMVKARLVQQGVTA-NINAVGYGKAQ 223
Query: 133 PSVYGHD-------EDAYAKNRRAIVF 152
+D NRR V
Sbjct: 224 QVKACDGIPHGQELKDCLRPNRRVEVT 250
>gi|167576627|ref|ZP_02369501.1| Chemotaxis lafU protein [Burkholderia thailandensis TXDOH]
Length = 311
Score = 42.1 bits (97), Expect = 0.028, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 59/151 (39%), Gaps = 11/151 (7%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLG 73
+++ + + + + + ++ D F+ S ++ P +++L+ L
Sbjct: 119 ALAARIMDEATRLGMNGNVATAINDDGVRITIHDSDKQGMFERRSDALNPQFVRLLTALV 178
Query: 74 SWLEKHDCDFLIEGHADELGS-----RNSSIALGLRRAYAVFNYFVARGISASRM-KVTS 127
L +I GH D +++ L RRA G+ A RM +++
Sbjct: 179 PVLGTVTNKMVIVGHTDATQYADTSVFSNNWNLSSRRALRARQILADGGMDAQRMFQISG 238
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
G +P+V + + + NRR + L RA
Sbjct: 239 MGDSVPAVPDNPD--HDMNRRVELLLLTSRA 267
>gi|55418024|ref|YP_133924.1| putative outer membrane protein precursor [Plasmid pB3]
gi|54969578|emb|CAG26014.1| putative outer membrane protein precursor [Plasmid pB3]
gi|116874771|emb|CAJ98564.1| putative outer membrane protein precursor [uncultured bacterium]
Length = 143
Score = 42.1 bits (97), Expect = 0.028, Method: Composition-based stats.
Identities = 27/154 (17%), Positives = 48/154 (31%), Gaps = 18/154 (11%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDT-SSY 59
M+ + + A + + S + D F + + V S
Sbjct: 1 MRKPVLLALSMAFLVSAQSALAAGDAG---------------NFGTPIKSGVSVSFPDSS 45
Query: 60 SIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
+ + L L I G L + AL LRRA + +Y VARG+S
Sbjct: 46 ATFQPTPEALELLADARNA--AIIYISGRTSTLRPSAADEALALRRALSARSYLVARGVS 103
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ V + +N+R + +
Sbjct: 104 PLKIMVNFASAADFVADNSTAEGRRENQRVDIEV 137
>gi|317406287|gb|EFV86528.1| OmpA/MotB domain-containing protein [Achromobacter xylosoxidans
C54]
Length = 240
Score = 42.1 bits (97), Expect = 0.028, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 46/120 (38%), Gaps = 1/120 (0%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL 72
I + ++ ++ + V F+T S ++ ++L +
Sbjct: 121 IASTFATSLNPTYKIVNGLRVAAGKDEQGLLDKVLTNRVVEFETGSATLTARGRELLDQV 180
Query: 73 GS-WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
+ H I GH D GSR++++AL RA AV Y V +G+ R + G +
Sbjct: 181 ADVIPKLHSDKVQIIGHTDSSGSRSTNLALSQARADAVRAYLVDKGLPPGRFETLGAGPD 240
>gi|152996653|ref|YP_001341488.1| OmpA/MotB domain-containing protein [Marinomonas sp. MWYL1]
gi|150837577|gb|ABR71553.1| OmpA/MotB domain protein [Marinomonas sp. MWYL1]
Length = 301
Score = 42.1 bits (97), Expect = 0.029, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 38/109 (34%), Gaps = 6/109 (5%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS---RNSSIALGLRR 105
D F+ S + P L ++ K +I GH D R + L R
Sbjct: 161 PDKPMFERGSARMMPDIENTLLSMAPIFNKVTNPIVITGHTDSSKFGGGRVDNWDLSALR 220
Query: 106 AYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
A A + G+ R+ +V +P + A+NRR + L
Sbjct: 221 ANAARHILEEGGVEDKRIAQVIGLSDTIPYNRLDTDS--AENRRISITL 267
>gi|237731623|ref|ZP_04562104.1| outer membrane protein A [Citrobacter sp. 30_2]
gi|226907162|gb|EEH93080.1| outer membrane protein A [Citrobacter sp. 30_2]
Length = 348
Score = 41.7 bits (96), Expect = 0.029, Method: Composition-based stats.
Identities = 22/118 (18%), Positives = 44/118 (37%), Gaps = 11/118 (9%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSRNSSIALGL 103
++ V F S ++ P ++ L ++ G++D G+ + + L
Sbjct: 227 NLKSDVMFGYDSAALTPEGKAAIAQLYRNPGLQPAKDKATVVIGYSDRTGAADYNQQLSA 286
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEMPS----VYGHDED----AYAKNRRAIVFL 153
+RA AV + VA G+ A+ + +G G A +R +V +
Sbjct: 287 QRAQAVADELVALGMPAANITAQGHGSSDSVTGSSCDGQTGQQLINCLAPDRHVVVEI 344
>gi|327478801|gb|AEA82111.1| OmpA/MotB domain-containing protein [Pseudomonas stutzeri DSM 4166]
Length = 311
Score = 41.7 bits (96), Expect = 0.029, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 50/147 (34%), Gaps = 10/147 (6%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSN 71
+ +++ + L + + + D F S + P ++L+
Sbjct: 130 LQALAALMQEVAGQVDALANLEVDVVPQGLRILIKDDQQRFMFQRGSAVLNPHFAKLLAV 189
Query: 72 LGSWLEKHDCDFLIEGHADELG----SRNSSIALGLRRAYAVFNYFVARG-ISASRMKVT 126
L L K + +I GH D S + L RA N V G S ++VT
Sbjct: 190 LAGVLSKVENKLIISGHTDATPYRLQSGYDNWNLSGDRALRARNVLVDAGLPGRSVLQVT 249
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ MP ED NRR + L
Sbjct: 250 AQADVMPLRPEAPEDG--ANRRVEILL 274
>gi|296447981|ref|ZP_06889887.1| OmpA/MotB domain protein [Methylosinus trichosporium OB3b]
gi|296254491|gb|EFH01612.1| OmpA/MotB domain protein [Methylosinus trichosporium OB3b]
Length = 381
Score = 41.7 bits (96), Expect = 0.031, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 50/144 (34%), Gaps = 9/144 (6%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSNLGSWLEK 78
++ + P + + E S+ D F S +P ++++ + L K
Sbjct: 240 AKAESANAQPGPHVEVTETAEGLLISLTDDANFSMFAIGSVKPKPQLVRIVGQIAGVLAK 299
Query: 79 HDCDFLIEGHADELGSR---NSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPS 134
+ + GH D + + L RA + + G++ R+ K+ Y
Sbjct: 300 QPGEVELRGHTDARSYKSKVYDNWRLSADRANMAYYMLLRGGLAEKRVVKIAGYADRNLK 359
Query: 135 VYGHDEDAYAKNRRAIVFLKGCRA 158
E A NRR + ++ A
Sbjct: 360 A--QKEPLAAVNRRIEILVRKGGA 381
>gi|296447839|ref|ZP_06889751.1| OmpA/MotB domain protein [Methylosinus trichosporium OB3b]
gi|296254639|gb|EFH01754.1| OmpA/MotB domain protein [Methylosinus trichosporium OB3b]
Length = 202
Score = 41.7 bits (96), Expect = 0.032, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 30/78 (38%), Gaps = 15/78 (19%)
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSYGKE------MPS 134
FLI GH D GS ++ AL RRA AV + R+ YG+ P
Sbjct: 125 KFLIMGHTDARGSDEANQALSERRAEAVKHLLTTEFGVAPDRLITVGYGETHLENPKRPF 184
Query: 135 VYGHDEDAYAKNRRAIVF 152
A+NRR V
Sbjct: 185 A--------AENRRVQVV 194
>gi|254473486|ref|ZP_05086883.1| OmpA/MotB domain protein [Pseudovibrio sp. JE062]
gi|211957602|gb|EEA92805.1| OmpA/MotB domain protein [Pseudovibrio sp. JE062]
Length = 573
Score = 41.7 bits (96), Expect = 0.032, Method: Composition-based stats.
Identities = 29/152 (19%), Positives = 57/152 (37%), Gaps = 11/152 (7%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSN 71
++SI+ + + ++ + D+ F S P ++ +
Sbjct: 425 LVSIANSVGAALDGLKTGASIEFTHSRDGVLIRIMDNDDFGMFAVGSSEPHPDVVKAMEK 484
Query: 72 LGSWLEKHDCDFLIEGHADELGS---RNSSIALGLRRAYAVFNYFVARGISASRMK-VTS 127
+ LE+ + + +I GH D RN + L RA+ + V G+ +R+ +
Sbjct: 485 IAKVLEEENGEIVIRGHTDARPFKSKRNDNWRLSTARAHMAYFMLVRGGLDENRIVGIEG 544
Query: 128 YGKEMPSVYGHDEDAYA-KNRRAIVFLKGCRA 158
Y E+ YA +NRR + L +A
Sbjct: 545 YADRRLKDV---EEPYAPQNRRIEIMLMKGQA 573
>gi|167725893|ref|ZP_02409129.1| chemotaxis LafU protein [Burkholderia pseudomallei DM98]
gi|167905052|ref|ZP_02492257.1| chemotaxis LafU protein [Burkholderia pseudomallei NCTC 13177]
Length = 271
Score = 41.7 bits (96), Expect = 0.032, Method: Composition-based stats.
Identities = 31/151 (20%), Positives = 58/151 (38%), Gaps = 11/151 (7%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLG 73
+++ + D + + + ++ D F+ S ++ P I++L+ L
Sbjct: 79 ALAARIMDEASRLGMDGNVATAINDDGVRITIHDSDKQGMFERRSDALNPPFIRLLTALV 138
Query: 74 SWLEKHDCDFLIEGHADELGS-----RNSSIALGLRRAYAVFNYFVARGISASRM-KVTS 127
L +I GH D +++ L RRA G+ A RM +++
Sbjct: 139 PVLGTVTNKMVIVGHTDATQYADASVFSNNWNLSSRRALRARQVLADGGMDAQRMFQISG 198
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
G +P+V D + NRR + L RA
Sbjct: 199 MGDSVPAVP--DNPNHDMNRRVELLLLTSRA 227
>gi|118577387|ref|YP_899627.1| OmpA/MotB domain-containing protein [Pelobacter propionicus DSM
2379]
gi|118504892|gb|ABL01374.1| OmpA/MotB domain protein [Pelobacter propionicus DSM 2379]
Length = 191
Score = 41.7 bits (96), Expect = 0.032, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 53/135 (39%), Gaps = 22/135 (16%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD 82
+ +T+ + + + + S+ V F S+ + A L+ L +
Sbjct: 69 STNTEDQISAGDVKPQNEDKTKTPSLLGVVNFTFDSHRLSKASKSQLNTLDFKNK----K 124
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE-----MPSVYG 137
+I+G +G +++L +RA V +Y +++G+S ++ +G+ P
Sbjct: 125 IVIDGFTCTIGRSKYNLSLSKKRARTVADYLISKGVSVLKIS--GFGESGKYKKKPL--- 179
Query: 138 HDEDAYAKNRRAIVF 152
NRR ++
Sbjct: 180 --------NRRVEIW 186
>gi|312961581|ref|ZP_07776081.1| OmpA domain protein [Pseudomonas fluorescens WH6]
gi|311284164|gb|EFQ62745.1| OmpA domain protein [Pseudomonas fluorescens WH6]
Length = 306
Score = 41.7 bits (96), Expect = 0.032, Method: Composition-based stats.
Identities = 31/132 (23%), Positives = 50/132 (37%), Gaps = 13/132 (9%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIR------PADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
+ V F+ + + L + + GH D +
Sbjct: 175 DTSRFKRYELSGDVVFNFGKSGPQDISAAGHKALAQLITALQHDDAQIKQMQVVGHTDPI 234
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY---GHDE---DAYAKN 146
G ++ LG RRA + + +A+GI S + +S G P VY G+ E YA N
Sbjct: 235 GDEAANQQLGQRRADTLRSLLIAKGIPESIISASSAGNREPVVYSCYGNREQRIACYAPN 294
Query: 147 RRAIVFLK-GCR 157
RR +V ++ G R
Sbjct: 295 RRVVVTVELGQR 306
>gi|319903022|ref|YP_004162750.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108]
gi|319418053|gb|ADV45164.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108]
Length = 411
Score = 41.7 bits (96), Expect = 0.033, Method: Composition-based stats.
Identities = 28/126 (22%), Positives = 45/126 (35%), Gaps = 7/126 (5%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIE 86
+ + + E+ SS + F +S I P+ L + + I
Sbjct: 288 PMKDEIKVTVTDPTERTSSIKFPIISFSFNSVWIEPSQRTKLHEIKLLLEKNPQTTITIS 347
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
G D GS + + + +RA AV + V RGIS R+ G + K
Sbjct: 348 GWCDNKGSEDVNKRISAKRADAVKLWLVRRGISTERIITEGCGIDRQQTDVD------KV 401
Query: 147 RRAIVF 152
RRA +
Sbjct: 402 RRAEIK 407
>gi|262341165|ref|YP_003284020.1| OmpA/MotB domain-containing protein [Blattabacterium sp. (Blattella
germanica) str. Bge]
gi|262272502|gb|ACY40410.1| OmpA/MotB domain-containing protein [Blattabacterium sp. (Blattella
germanica) str. Bge]
Length = 413
Score = 41.7 bits (96), Expect = 0.033, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 51/118 (43%), Gaps = 15/118 (12%)
Query: 41 QEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW--LEKHDCDFLIEGHADELGSRNSS 98
+ V + FD +++ P + +++ + + F I+G+ D G + +
Sbjct: 306 NQGCPDVVFSPILFDLGKFALTPRSLSIVNEIAEIIINSLPNSKFYIDGYTDSHGKLSYN 365
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSY--GKEMPSVYGHDEDAYAKNRRAIVFLK 154
L L+RA +VF +++G+ +SR++V GK K RR + ++
Sbjct: 366 KTLSLKRANSVFEALISKGVDSSRIEVRGLVGGKYK-----------KKGRRVEITIR 412
>gi|254497974|ref|ZP_05110737.1| flagellar motor protein MotB [Legionella drancourtii LLAP12]
gi|254352751|gb|EET11523.1| flagellar motor protein MotB [Legionella drancourtii LLAP12]
Length = 293
Score = 41.7 bits (96), Expect = 0.033, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 9/109 (8%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR------NSSIALGLRRA 106
FD S + P + + + L I+G+ D ++ L +RA
Sbjct: 177 MFDVGSEKLNPQFEPIFTKISKLLNGVPNKVTIQGYTDAHPYHNPDELEYTNWELSTQRA 236
Query: 107 YAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
A + G+ ++ MKV+ + MP D A NRR + +
Sbjct: 237 NAARRALIKAGLDENKVMKVSGFSSTMPLDK-KDPFN-AINRRISIIVM 283
>gi|319781670|ref|YP_004141146.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317167558|gb|ADV11096.1| OmpA/MotB domain protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 445
Score = 41.7 bits (96), Expect = 0.033, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 45/126 (35%), Gaps = 9/126 (7%)
Query: 33 TVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHA 89
++ + + S+ D + F+ S R + + +G + I GH
Sbjct: 316 DGVSVEATDKGVVISITDQLDFGMFEVGSALPRRELVLAMEKIGRIVNSQKGTISINGHT 375
Query: 90 DELGSR---NSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAK 145
D R + L RA++ + V G+ R+ V + P + D A A
Sbjct: 376 DARPFRSDSYDNWRLSTARAHSAYYMLVRGGVDERRITEVAGFADRQPKIA-ADPLA-AA 433
Query: 146 NRRAIV 151
NRR +
Sbjct: 434 NRRIEI 439
>gi|149377734|ref|ZP_01895468.1| Flagellar motor protein [Marinobacter algicola DG893]
gi|149357960|gb|EDM46448.1| Flagellar motor protein [Marinobacter algicola DG893]
Length = 319
Score = 41.7 bits (96), Expect = 0.033, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 37/119 (31%), Gaps = 7/119 (5%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR----NSSI 99
FD+ ++ +L L L + I GH D ++
Sbjct: 150 QIVDRSQRPMFDSGRAELKYYSQDILFELAKTLGTVNNKLSITGHTDSTPFSGRPGYTNW 209
Query: 100 ALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA VA G+ +++ +V + D A NRR + + +
Sbjct: 210 ELSADRANTARRALVAGGVRQNQIGRVVGLSDSV-LFDQDDPQA-PVNRRISIIVMNKK 266
>gi|323139665|ref|ZP_08074707.1| OmpA/MotB domain protein [Methylocystis sp. ATCC 49242]
gi|322395097|gb|EFX97656.1| OmpA/MotB domain protein [Methylocystis sp. ATCC 49242]
Length = 351
Score = 41.7 bits (96), Expect = 0.034, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 49/140 (35%), Gaps = 9/140 (6%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSNLGSWLEKH 79
N + + + E ++ D F+ S +P ++++ +G L K
Sbjct: 211 NQEARGAHAAPKTEVKQADEGVLITLTDDANFSMFEVGSIEPKPQLVRIIGQIGKVLAKK 270
Query: 80 DCDFLIEGHADELGSR---NSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSV 135
+ + GH D + L RA V + G+ +R+ K+ +
Sbjct: 271 TGEIEVRGHTDGRSYTSKSYDNWRLSSDRATVVNYMLIRGGLPPARVGKIVGM-ADRHLK 329
Query: 136 YGHDEDAYAKNRRAIVFLKG 155
D A NRR + L+G
Sbjct: 330 TPKDPLA-PVNRRIEILLRG 348
>gi|187919311|ref|YP_001888342.1| OmpA/MotB domain-containing protein [Burkholderia phytofirmans
PsJN]
gi|187717749|gb|ACD18972.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
Length = 222
Score = 41.7 bits (96), Expect = 0.035, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 46/118 (38%), Gaps = 5/118 (4%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLI 85
+ + S+ + ++ + F++ + P VL+ + E+ + L+
Sbjct: 89 APLRDNRQITISNAAQGVEIAINAKILFNSGDARLLPESSDVLNQIAGVLRERSKNNILV 148
Query: 86 EGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
EGH D + S+ L RA AV +F +GI A RM P + G D
Sbjct: 149 EGHTDNVPISTAKYESNWELSSARAGAVVRFFADKGIEAHRMAAIGRADNFPLIIGDD 206
>gi|319794930|ref|YP_004156570.1| ompa/motb domain protein [Variovorax paradoxus EPS]
gi|315597393|gb|ADU38459.1| OmpA/MotB domain protein [Variovorax paradoxus EPS]
Length = 402
Score = 41.7 bits (96), Expect = 0.036, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 2/104 (1%)
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYF-VA 115
I A L + + D ++ GH GS + + L L+RA +V +
Sbjct: 299 GDPKISAAYPMWLRQIARQAAQIDSCVVVTGHTSRTGSESVNERLSLQRAVSVKSKLVTE 358
Query: 116 RGISASRMKVTSYGKEMPSV-YGHDEDAYAKNRRAIVFLKGCRA 158
A +++ + G V G D+ + A +RR + GC A
Sbjct: 359 APPLAKKLRESGMGFRENIVGTGADDASDALDRRVEFKVVGCEA 402
>gi|315122280|ref|YP_004062769.1| flagellar motor protein MotB [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495682|gb|ADR52281.1| flagellar motor protein MotB [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 158
Score = 41.3 bits (95), Expect = 0.038, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 6/110 (5%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE---LGSRNSSIALGLRR 105
++ FD SS P I +L +G L + + + IEGH D S + L L R
Sbjct: 47 NNTPMFDKSSSIPLPEMILILQKIGEALSQSNENISIEGHTDASPFRHSTGDNWKLSLDR 106
Query: 106 AYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
AY+ + + GIS R+ ++ + P + D A NRR + ++
Sbjct: 107 AYSTYQILMKSGISEKRISKISGLAQHNPKIS-SDPMN-AANRRIEILVQ 154
>gi|261880624|ref|ZP_06007051.1| immunogenic lipoprotein PG3 [Prevotella bergensis DSM 17361]
gi|270332665|gb|EFA43451.1| immunogenic lipoprotein PG3 [Prevotella bergensis DSM 17361]
Length = 222
Score = 41.3 bits (95), Expect = 0.038, Method: Composition-based stats.
Identities = 28/143 (19%), Positives = 63/143 (44%), Gaps = 6/143 (4%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
++ K + + V + + L+ + + FD + ++ + + L+ + L+
Sbjct: 73 VAAETAAQVKNAKVEEVTDANGLKA-VKVTFDSGILFDLNQATLNSSSKKELAKFSNVLK 131
Query: 78 KHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSV 135
++ I G+ D G+ ++ L +RA +V NY + G+S ++M+ V G +
Sbjct: 132 ENSSCHVDIYGYTDRSGNDAINVPLSQKRAQSVANYLSSCGVSNTQMQNVVGKGSQDEI- 190
Query: 136 YGHDEDAYAKNRRAIVFLKGCRA 158
++ NRR V+L +A
Sbjct: 191 --ENKRVSKVNRRVEVYLYASQA 211
>gi|66043829|ref|YP_233670.1| flagellar motor protein MotB [Pseudomonas syringae pv. syringae
B728a]
gi|63254536|gb|AAY35632.1| OmpA/MotB [Pseudomonas syringae pv. syringae B728a]
gi|330971543|gb|EGH71609.1| flagellar motor protein MotB [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 349
Score = 41.3 bits (95), Expect = 0.039, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 45/142 (31%), Gaps = 10/142 (7%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ ++ + Q+ + D FD+ S ++P +L L ++
Sbjct: 135 NPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDSGSARLKPYFEDILLALADTIKSVPN 194
Query: 82 DFLIEGHADELGSR----NSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVY 136
I GH D + L RA A VA S++ +V Y
Sbjct: 195 KVSISGHTDATPFVGSGGFGNWELSANRANAARRALVAGTYPDSQVARVVGYASSA-LYD 253
Query: 137 GHDEDAYAKNRRAIVFLKGCRA 158
+ NRR + + +A
Sbjct: 254 RQNPTN-PINRRIDIVVLTKKA 274
>gi|330901956|gb|EGH33293.1| flagellar motor protein MotB [Pseudomonas syringae pv. japonica
str. M301072PT]
Length = 302
Score = 41.3 bits (95), Expect = 0.039, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 45/142 (31%), Gaps = 10/142 (7%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ ++ + Q+ + D FD+ S ++P +L L ++
Sbjct: 135 NPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDSGSARLKPYFEDILLALADTIKSVPN 194
Query: 82 DFLIEGHADELGSR----NSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVY 136
I GH D + L RA A VA S++ +V Y
Sbjct: 195 KVSISGHTDATPFVGSGGFGNWELSANRANAARRALVAGTYPDSQVARVVGYASSA-LYD 253
Query: 137 GHDEDAYAKNRRAIVFLKGCRA 158
+ NRR + + +A
Sbjct: 254 RQNPTN-PINRRIDIVVLTKKA 274
>gi|218509333|ref|ZP_03507211.1| flagellar motor protein MotB [Rhizobium etli Brasil 5]
Length = 228
Score = 41.3 bits (95), Expect = 0.039, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 41/109 (37%), Gaps = 4/109 (3%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS---RNSSIALGLRR 105
D F+ S R + + +G+ L++ + GH D +N + L + R
Sbjct: 119 NDDSMFNIGSAVPRQEMVLAMERIGTILKERGGAVAVRGHTDGRQYKGGQNENWRLSMDR 178
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
A + + V G+ R+ S + D A NRR + ++
Sbjct: 179 AQSAYYMLVRGGLDEKRISQVSGFADRRLKLPADPFN-AANRRIEILVQ 226
>gi|86136815|ref|ZP_01055393.1| OmpA domain protein [Roseobacter sp. MED193]
gi|85826139|gb|EAQ46336.1| OmpA domain protein [Roseobacter sp. MED193]
Length = 518
Score = 41.3 bits (95), Expect = 0.040, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 22/55 (40%)
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
AV A ++ ++V ++G+ +P + NRR V+++
Sbjct: 464 KRAQGVRDAVLATAEAGSVARVDVQVDAFGEALPMACDDSDWGRQVNRRVEVWVQ 518
>gi|307729365|ref|YP_003906589.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003]
gi|307583900|gb|ADN57298.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003]
Length = 242
Score = 41.3 bits (95), Expect = 0.040, Method: Composition-based stats.
Identities = 33/150 (22%), Positives = 59/150 (39%), Gaps = 13/150 (8%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS---IRPADIQVLSNLGSW 75
G + + V+ +++ E F S+ F S + PA L + +
Sbjct: 95 CGEVLSNKAPADIGAVVAQTATLESF--SLESDTLFPFGKSSRESMLPAAKARLDEIAAR 152
Query: 76 LEKHD--CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
+ +H+ + GH D LG + + L L RA V +Y VA G+ S + G P
Sbjct: 153 IRQHEHVSAITVVGHTDRLGPESINGPLSLARANTVRDYLVAHGLDGSIVLAKGVGSSEP 212
Query: 134 SVYGHDEDAYAK------NRRAIVFLKGCR 157
+ + DA A +R + ++G +
Sbjct: 213 RTHCAEHDARALIACLQEDRYVSITVEGRK 242
>gi|304392497|ref|ZP_07374437.1| chemotaxis protein MotB [Ahrensia sp. R2A130]
gi|303295127|gb|EFL89487.1| chemotaxis protein MotB [Ahrensia sp. R2A130]
Length = 364
Score = 41.3 bits (95), Expect = 0.041, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 48/151 (31%), Gaps = 11/151 (7%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQV 68
A + + K L+ + + S+ D F+T S +
Sbjct: 215 AGASDVLKELKAAVAKAVDDGPRLDVTPTPDGLLISITDDFDFAMFETGSSVPSGRLVLA 274
Query: 69 LSNLGSWLEKHDCDFLIEGHADELGSR---NSSIALGLRRAYAVFNYFVARGISASRM-K 124
+ + L + I GH D R + L RA++ + G R+ +
Sbjct: 275 MDAVAQVLSERPGKLHIHGHTDARPFRGGERDNWTLSSARAHSARYMLLRGGFGEKRIVE 334
Query: 125 VTSYGKEMP-SVYGHDEDAYAKNRRAIVFLK 154
++ + V D A NRR + L+
Sbjct: 335 ISGFADRRLKLVDEPDA---ASNRRIELLLE 362
>gi|121602153|ref|YP_989388.1| putative flagellar motor protein MotB [Bartonella bacilliformis
KC583]
gi|120614330|gb|ABM44931.1| putative flagellar motor protein MotB [Bartonella bacilliformis
KC583]
Length = 357
Score = 41.3 bits (95), Expect = 0.041, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 41/114 (35%), Gaps = 6/114 (5%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS---RNSSIALGLRR 105
F S ++V+ + + KH D +I GH D + L R
Sbjct: 245 PQREMFRVGSSLPTAETVEVIGEMAKIIAKHQGDVIISGHTDSRPYRSANRDNWQLSTAR 304
Query: 106 AYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
A + V G+ R+ +V Y + D A A+NRR +F++
Sbjct: 305 AQMAYYMLVRGGLDEKRILRVEGY-ADRDLKNKADPYA-AENRRISIFIRNPNG 356
>gi|121998194|ref|YP_001002981.1| OmpA/MotB domain-containing protein [Halorhodospira halophila SL1]
gi|121589599|gb|ABM62179.1| OmpA/MotB domain protein [Halorhodospira halophila SL1]
Length = 321
Score = 41.3 bits (95), Expect = 0.042, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 37/105 (35%), Gaps = 9/105 (8%)
Query: 52 VFFDTSSYSIRPADIQVLSNL--GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
V+F T S + + + H L G+AD GS + L RA AV
Sbjct: 217 VYFATGSDDLTRNALDEIRRFVRAVEDNPHWGVILSIGYADTRGSAEVNEQLAEARASAV 276
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDA---YAKNRRAIV 151
+ V G+ R++V + E A NRR +
Sbjct: 277 RDELVHLGLPEDRIEV----EARLIDDEDAEQDIHELAGNRRVEL 317
>gi|313667783|ref|YP_004048067.1| outer membrane protein class 4 (RmpM) [Neisseria lactamica ST-640]
gi|313005245|emb|CBN86678.1| outer membrane protein class 4 (RmpM) [Neisseria lactamica 020-06]
Length = 230
Score = 41.3 bits (95), Expect = 0.042, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 47/130 (36%), Gaps = 21/130 (16%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLR 104
S+ F S+R L L L + + +EGH D +GS + AL R
Sbjct: 87 VSLSAKTLFGFDKDSLRAEAQDNLKVLAQRLAQTNVQSVRVEGHTDFMGSEKYNQALSER 146
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK------------------- 145
RA V NY V+ G+ AS+ G+ + E AK
Sbjct: 147 RANVVANYLVSNGVPASKTSAAGLGESQAQMTQVCEAEVAKLGAKASKAKKREALIACIE 206
Query: 146 -NRRAIVFLK 154
+RR V ++
Sbjct: 207 PDRRVDVKIR 216
>gi|294669045|ref|ZP_06734131.1| putative cytochrome c oxidase, subunit II [Neisseria elongata
subsp. glycolytica ATCC 29315]
gi|291309037|gb|EFE50280.1| putative cytochrome c oxidase, subunit II [Neisseria elongata
subsp. glycolytica ATCC 29315]
Length = 241
Score = 41.3 bits (95), Expect = 0.042, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 50/138 (36%), Gaps = 12/138 (8%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV--FFDTSSYSIRPADIQVLSNLGSWLE 77
G+ + + + + E + +V +F T + P + L ++
Sbjct: 113 GLSVPVDESVAQNPGSANEAQDEARIVTANGAVKFYFATGKADVAPGAQEALKDV-LVAA 171
Query: 78 KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
++ G+ D G+ + L +RA+AV + G+ ++++
Sbjct: 172 LGGKKIVVSGYHDSTGNAQVNEELSKQRAFAVRTVLLGFGVPDKQIELR--------KPS 223
Query: 138 HDEDAY-AKNRRAIVFLK 154
E A+ RR VF++
Sbjct: 224 DTEAGSGAEARRVEVFVE 241
>gi|254504256|ref|ZP_05116407.1| OmpA family protein [Labrenzia alexandrii DFL-11]
gi|222440327|gb|EEE47006.1| OmpA family protein [Labrenzia alexandrii DFL-11]
Length = 471
Score = 41.3 bits (95), Expect = 0.042, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 48/151 (31%), Gaps = 9/151 (5%)
Query: 11 SAITMMSISGIDNLDTKI---SSPDTVLNESSLQEQFSSSVGDSVFFDT--SSYSIRPAD 65
A+ + ++ + + ++ + S D F S RP
Sbjct: 316 GALLVAELTTVLDAAEGTLLENTAAQITVVRQDDGALISLTDDQNFGMFAIGSAEPRPEL 375
Query: 66 IQVLSNLGSWLEKHDCDFLIEGHADELGSR---NSSIALGLRRAYAVFNYFVARGISASR 122
+ +L LG + K +I GH D + + L RA+ G+ A R
Sbjct: 376 VSLLERLGKVISKTGAQIVITGHTDARPFKSKTYDNWRLSSARAHMALYMLSRGGVGADR 435
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ D A A NRR ++L
Sbjct: 436 FVRIEGAADRHLKNAEDPFA-ASNRRVEIYL 465
>gi|254487179|ref|ZP_05100384.1| outer membrane protein, OmpA/MotB family [Roseobacter sp. GAI101]
gi|214044048|gb|EEB84686.1| outer membrane protein, OmpA/MotB family [Roseobacter sp. GAI101]
Length = 632
Score = 41.3 bits (95), Expect = 0.042, Method: Composition-based stats.
Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 8/108 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGS-----WLEKHDCDFLIEGHADELGSRNSSIALGLR 104
D++ F+T S +I+P + L+ +G+ LIEGH D +G+ ++AL R
Sbjct: 518 DALRFETGSAAIQPEQARALAKIGTAITGAIRNDPRTVILIEGHTDAVGNEGYNLALSDR 577
Query: 105 RAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA V + YG+ V A NRRA+V
Sbjct: 578 RAETVALALTEYFDVPPANLITQGYGETALKVPSQT--AQPANRRAVV 623
>gi|83311678|ref|YP_421942.1| flagellar motor protein [Magnetospirillum magneticum AMB-1]
gi|82946519|dbj|BAE51383.1| Flagellar motor protein [Magnetospirillum magneticum AMB-1]
Length = 344
Score = 41.3 bits (95), Expect = 0.043, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 11/137 (8%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDS---VFFDTSSYSIRPADIQVLSNLGSWLEK-HDC 81
++ + + E + D F + S + +L + + + D
Sbjct: 183 PEMKQFQGSMLVDNTPEGLRIQITDQEGLAMFPSGSSAPYGHTRAMLDLVSRVVRQLPDN 242
Query: 82 DFLIEGHADE----LGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVY 136
I GH D S ++ L RA A +A G+ R+ ++ + P
Sbjct: 243 RIAISGHTDAIPFRDPSGYTNWELSADRALATRRALIASGVPEGRIDRIVGRADQEPLDK 302
Query: 137 GHDEDAYAKNRRAIVFL 153
D +NRR + L
Sbjct: 303 -ADPKGL-RNRRISIIL 317
>gi|153831776|ref|ZP_01984443.1| lateral flagellar motor protein B [Vibrio harveyi HY01]
gi|148872286|gb|EDL71103.1| lateral flagellar motor protein B [Vibrio harveyi HY01]
Length = 330
Score = 41.3 bits (95), Expect = 0.043, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 51/153 (33%), Gaps = 11/153 (7%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSN 71
+ ++ + + S +N + + + D F + P +L
Sbjct: 129 LALLAKVIDEVVGQISAQGNVNVTITPQGLRIVLQDDYKQHMFSRGGAELTPFFEDLLLA 188
Query: 72 LGSWLEKHDCDFLIEGHADELGS-----RNSSIALGLRRAYAVFNYFVARGISASR-MKV 125
L E+ +I GH D R S+ AL RA N V G+ R M+V
Sbjct: 189 LAPVFERISNPLIISGHTDSTPFKKRFGRQSNWALSASRADVARNTLVEGGMPDDRVMQV 248
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
T + ++NRR +F+ A
Sbjct: 249 TGMSDRALLNPEEPDS--SENRRIELFILTTPA 279
>gi|253571969|ref|ZP_04849374.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_6]
gi|251838566|gb|EES66652.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_6]
Length = 363
Score = 41.3 bits (95), Expect = 0.044, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 51/131 (38%), Gaps = 10/131 (7%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFL 84
+ V +E + + ++FF +S I+ L +L +LE H
Sbjct: 238 EQPKPAPVVEQPQPKKEVVAEPMKQNIFFALNSAKIQDDQQAKLVSLIEYLETHPAAKIS 297
Query: 85 IEGHAD-ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE-MPSVYGHDEDA 142
I G+AD G+ + L +RA V +GI+A R+K+ G P +
Sbjct: 298 ITGYADVNTGNPKINSKLSEKRAVNVAEALKVKGIAADRIKIDFKGDTVQPYA---TPE- 353
Query: 143 YAKNRRAIVFL 153
+N R + +
Sbjct: 354 --EN-RVSICI 361
>gi|58038613|ref|YP_190577.1| chemotaxis MotB protein [Gluconobacter oxydans 621H]
gi|58001027|gb|AAW59921.1| Chemotaxis MotB protein [Gluconobacter oxydans 621H]
Length = 311
Score = 41.3 bits (95), Expect = 0.044, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 52/139 (37%), Gaps = 9/139 (6%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ +++ + ++ + + + D F S P +Q++ + +LEK
Sbjct: 170 SNTPELADVRSQVSVTVGDDGLHVQIADSDHQPMFAMGQSSPNPHAVQLIKAIVPYLEKL 229
Query: 80 DCDFLIEGHADELGSRN---SSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSV 135
I G+ D R S+ +L RA AV + V G R+ V+ Y
Sbjct: 230 HGKLSIAGYTDAAPYRPGQLSNWSLSSARAVAVRDLVVQSGFPDRRLKSVSGYADRNLFD 289
Query: 136 YGHDEDAYAKNRRAIVFLK 154
+ +NRR ++ L
Sbjct: 290 P--TQPLNPRNRRIVLVLS 306
>gi|15606304|ref|NP_213683.1| flagellar motor protein MotB-like [Aquifex aeolicus VF5]
gi|2983508|gb|AAC07085.1| flagellar motor protein MotB-like [Aquifex aeolicus VF5]
Length = 224
Score = 41.3 bits (95), Expect = 0.044, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 41/128 (32%), Gaps = 8/128 (6%)
Query: 34 VLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS---WLEKHDCDFLIEGHA- 89
+E + D +FF+ Y + + L + L +EGH
Sbjct: 90 AYQVVVAEEYIKLRLFDRIFFENGDYKLTEKGRKTLEEIAPLLIALSDEISSIRVEGHVG 149
Query: 90 ----DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
+ + L RRA V Y RG+ ++ SYG + P +
Sbjct: 150 PTVEIKNPIIRNKWELAGRRATEVIRYLENRGVPHDKLVAVSYGDKRPLYRWRQSVLIER 209
Query: 146 NRRAIVFL 153
N R + +
Sbjct: 210 NNRVEINI 217
>gi|325109023|ref|YP_004270091.1| OmpA/MotB domain protein [Planctomyces brasiliensis DSM 5305]
gi|324969291|gb|ADY60069.1| OmpA/MotB domain protein [Planctomyces brasiliensis DSM 5305]
Length = 242
Score = 41.3 bits (95), Expect = 0.045, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 45/138 (32%), Gaps = 6/138 (4%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ + ++G FD S ++ + + L L L+
Sbjct: 98 KRSKDSQGTVGKNETAERVNHGNVVTMGGPALFDPFSATLNESIRENLDILAGVLKTRSN 157
Query: 82 DFLIEGHADELG-----SRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSV 135
+ GHA AL RA AV NY + R+ V++ G P +
Sbjct: 158 LICVRGHASPEPLPFDSPFADQFALSFARAEAVANYLIEDQKIPQERIIVSAAGDTEPRM 217
Query: 136 YGHDEDAYAKNRRAIVFL 153
D + NRR VFL
Sbjct: 218 LSRDAEQMGSNRRVDVFL 235
>gi|302062274|ref|ZP_07253815.1| flagellar motor protein MotB [Pseudomonas syringae pv. tomato K40]
Length = 341
Score = 41.3 bits (95), Expect = 0.045, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 45/142 (31%), Gaps = 10/142 (7%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ ++ + Q+ + D FD+ S ++P +L L +
Sbjct: 135 NPQLQKFKDQILFEITQDGLRIQIMDADNRPMFDSGSARLKPYFEDILLALADTIRSVPN 194
Query: 82 DFLIEGHADELG----SRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVY 136
I GH D + + L RA A VA S++ +V Y
Sbjct: 195 KISISGHTDATPFVGNNGFGNWELSANRANAARRALVAGTYPDSQVARVVGYASSA-LYD 253
Query: 137 GHDEDAYAKNRRAIVFLKGCRA 158
+ NRR + + +A
Sbjct: 254 RENPTN-PVNRRIDIVVLTKKA 274
>gi|212637803|ref|YP_002314328.1| MotB protein [Shewanella piezotolerans WP3]
gi|212559287|gb|ACJ31741.1| MotB protein [Shewanella piezotolerans WP3]
Length = 330
Score = 41.3 bits (95), Expect = 0.045, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 48/141 (34%), Gaps = 6/141 (4%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDF 83
D +++ + + F S +++P +L LG L K +
Sbjct: 156 TDVSMNANVELQVVPQGVRILMHDNINQFMFTRGSSNMKPYFEDLLMALGPILGKVENKM 215
Query: 84 LIEGHADELGS---RNSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHD 139
I GH D ++ L +RA G+ + ++VT + P D
Sbjct: 216 SISGHTDSSPYAGKTFTNWELSSKRALLARRVLEYSGVQRDQVIQVTGMADQAP-YIADD 274
Query: 140 EDAYAKNRRAIVFLKGCRANT 160
A A NRR + + A T
Sbjct: 275 PAA-AANRRIEMLVMTSAAET 294
>gi|254460712|ref|ZP_05074128.1| hypothetical protein RB2083_1303 [Rhodobacterales bacterium
HTCC2083]
gi|206677301|gb|EDZ41788.1| hypothetical protein RB2083_1303 [Rhodobacteraceae bacterium
HTCC2083]
Length = 44
Score = 41.3 bits (95), Expect = 0.045, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 14/35 (40%)
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+ARG+ + YG P E + A NR
Sbjct: 1 MIARGVPREAISPVGYGPSKPLADNATEASRAANR 35
>gi|332185559|ref|ZP_08387307.1| hypothetical protein SUS17_607 [Sphingomonas sp. S17]
gi|332014537|gb|EGI56594.1| hypothetical protein SUS17_607 [Sphingomonas sp. S17]
Length = 78
Score = 41.3 bits (95), Expect = 0.045, Method: Composition-based stats.
Identities = 17/71 (23%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
++ G D G+ ++ L RRA AV Y +R I + ++G++ + D
Sbjct: 1 MVAGFTDTSGTPRYNMGLSQRRADAVKAYMTSRSIPDGSITTEAFGEQRDKLRVQTADGV 60
Query: 144 A--KNRRAIVF 152
+NRR +
Sbjct: 61 REVQNRRVEIT 71
>gi|303237447|ref|ZP_07324013.1| OmpA family protein [Prevotella disiens FB035-09AN]
gi|302482397|gb|EFL45426.1| OmpA family protein [Prevotella disiens FB035-09AN]
Length = 226
Score = 41.3 bits (95), Expect = 0.045, Method: Composition-based stats.
Identities = 31/142 (21%), Positives = 63/142 (44%), Gaps = 6/142 (4%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-L 76
++ + + + + + L + + + F T+S S+ A + L+N
Sbjct: 78 VAAQTAAKVENAKVEKTKDANGL-DCVKVTFDSGILFATNSSSLSAASKKDLNNFAGVLK 136
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT-SYGKEMPSV 135
+ DCD I+G+ D G+ N ++ L +RA AV +Y A+G+ A +++ G P
Sbjct: 137 QNRDCDVAIQGYTDASGNDNINLPLSEKRATAVSSYLRAQGVPAGQIRTVEGLGSANPI- 195
Query: 136 YGHDEDAYAKNRRAIVFLKGCR 157
++ NRR V++ +
Sbjct: 196 --ENKRISQANRRVEVYMYASK 215
>gi|257092025|ref|YP_003165666.1| membrane-bound proton-translocating pyrophosphatase [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257044549|gb|ACV33737.1| V-type H(+)-translocating pyrophosphatase [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 806
Score = 41.3 bits (95), Expect = 0.045, Method: Composition-based stats.
Identities = 26/150 (17%), Positives = 52/150 (34%), Gaps = 18/150 (12%)
Query: 7 FIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADI 66
+ L + +M + + + + + + V+F T S +
Sbjct: 673 IVALMIVPLMVPASTAKPVAAMPAATVAIAVVPVAK---------VYFATGSAELPADAT 723
Query: 67 QVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
+ L + + + I G D GS+ + + RA AV + GI+ R+++
Sbjct: 724 KTLEVIVVHAKANPGAKLAISGFHDPSGSQAVNEEVAKNRAKAVRDSLKNVGIAEERIEL 783
Query: 126 TSYGKEMP-SVYGHDEDAYAKNRRAIVFLK 154
P G + A A RR V ++
Sbjct: 784 R-----KPEVTTGGGDPAEA--RRVEVSVQ 806
>gi|261401169|ref|ZP_05987294.1| OmpA family protein [Neisseria lactamica ATCC 23970]
gi|269208842|gb|EEZ75297.1| OmpA family protein [Neisseria lactamica ATCC 23970]
gi|309379032|emb|CBX22334.1| reduction-modifiable protein of the meningococcus [Neisseria
lactamica Y92-1009]
Length = 230
Score = 41.3 bits (95), Expect = 0.045, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 47/130 (36%), Gaps = 21/130 (16%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLR 104
S+ F S+R L L L + + +EGH D +GS + AL R
Sbjct: 87 VSLSAKTLFGFDKDSLRAEAQDNLKVLAQRLAQTNVQSVRVEGHTDFMGSEKYNQALSER 146
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAK------------------- 145
RA V NY V+ G+ AS+ G+ + E AK
Sbjct: 147 RANVVANYLVSNGVPASKTSAAGLGESQAQMTQVCEAEVAKLGAKASKAKKREALIACIE 206
Query: 146 -NRRAIVFLK 154
+RR V ++
Sbjct: 207 PDRRVDVKIR 216
>gi|170691012|ref|ZP_02882178.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
gi|170144261|gb|EDT12423.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
Length = 353
Score = 41.3 bits (95), Expect = 0.045, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 41/103 (39%), Gaps = 9/103 (8%)
Query: 57 SSYSIRPADIQVLSNLGSWLEKHD--CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
+ ++ A + L + ++ + I G+ D LG + +L L+RA V Y
Sbjct: 245 NDAAMLSAGRRELDKVARSMKTTATLRELRITGYTDRLGDNAHNQSLSLQRAQTVAAYLR 304
Query: 115 ARGISASRMKVTSYGKEMPSVYGH----DEDAY--AKNRRAIV 151
ARG++ + + G P DE A NRR +
Sbjct: 305 ARGVTVP-IAIRGLGSAKPVAQCRQTRRDELVRCLAPNRRVEI 346
>gi|269960142|ref|ZP_06174518.1| chemotaxis LafU protein [Vibrio harveyi 1DA3]
gi|269835113|gb|EEZ89196.1| chemotaxis LafU protein [Vibrio harveyi 1DA3]
Length = 330
Score = 41.3 bits (95), Expect = 0.047, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 51/153 (33%), Gaps = 11/153 (7%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSN 71
+ ++ + + S +N + + + D F + P +L
Sbjct: 129 LALLAKVIDEVVGQISAQGNVNVTITPQGLRIVLQDDYKQHMFSRGGAELTPFFEDLLLA 188
Query: 72 LGSWLEKHDCDFLIEGHADELGS-----RNSSIALGLRRAYAVFNYFVARGISASR-MKV 125
L E+ +I GH D R S+ AL RA N V G+ R M+V
Sbjct: 189 LAPVFERISNPLIISGHTDSTPFKKRFGRQSNWALSASRADVARNTLVEGGMPDDRVMQV 248
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
T + ++NRR +F+ A
Sbjct: 249 TGMSDRALLNPEEPDS--SENRRIELFILTTPA 279
>gi|229588064|ref|YP_002870183.1| flagellar motor protein MotB [Pseudomonas fluorescens SBW25]
gi|229359930|emb|CAY46784.1| chemotaxis MotB protein [Pseudomonas fluorescens SBW25]
Length = 339
Score = 41.3 bits (95), Expect = 0.047, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 41/134 (30%), Gaps = 10/134 (7%)
Query: 33 TVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHA 89
++ + + D FD+ S ++P +L + ++ I GH
Sbjct: 143 DQISFEITPDGLRIQITDAANRPMFDSGSARLKPYFEDILLAMADTIKAVPNKISISGHT 202
Query: 90 DELGS----RNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYA 144
D + L RA A VA ++ +V + D
Sbjct: 203 DAKPYAGQGDFGNWELSANRANAARRALVAGSYPDPQVARVVGFASSQ-LFDHKDPFN-P 260
Query: 145 KNRRAIVFLKGCRA 158
NRR + + +A
Sbjct: 261 INRRIDIVVLTKKA 274
>gi|253998520|ref|YP_003050583.1| flagellar motor protein MotB [Methylovorus sp. SIP3-4]
gi|313200598|ref|YP_004039256.1| ompa/motb domain-containing protein [Methylovorus sp. MP688]
gi|253985199|gb|ACT50056.1| OmpA/MotB domain protein [Methylovorus sp. SIP3-4]
gi|312439914|gb|ADQ84020.1| OmpA/MotB domain protein [Methylovorus sp. MP688]
Length = 316
Score = 41.3 bits (95), Expect = 0.047, Method: Composition-based stats.
Identities = 28/127 (22%), Positives = 45/127 (35%), Gaps = 20/127 (15%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F +S ++P Q+L +GS L + GH D + S+
Sbjct: 162 QIVDEQNRPMFASSKAELQPYAKQILHEIGSMLNDVPNKISLSGHTDAVPYPTGDKGYSN 221
Query: 99 IALGLRRAYAVFNYFVARGISASRM-KVTS------YGKEMPSVYGHDEDAYAKNRRAIV 151
L RA A VA G+ S++ +V + KE P NRR +
Sbjct: 222 WELSSDRANASRRELVAGGMDESKLLRVVGLSSASLFDKENPLNP--------VNRRISI 273
Query: 152 FLKGCRA 158
+ +A
Sbjct: 274 IIMNKKA 280
>gi|332666720|ref|YP_004449508.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
DSM 1100]
gi|332335534|gb|AEE52635.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
Length = 508
Score = 41.3 bits (95), Expect = 0.047, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 5/106 (4%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+ F +S+ I+ +D L+ +G L+ + ++ G D GS + + L RA V
Sbjct: 390 LHFPSSTAVIKYSDYGNLAGVGRMLKANPSIRLVVTGFTDSTGSESINNQLSYDRAKNVI 449
Query: 111 NYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
+ + A R + G V NRRA + G
Sbjct: 450 EHLMNNHGIARGRFVLQWKGSADNLVPTSSS---YMNRRAEFRIAG 492
>gi|296156473|ref|ZP_06839311.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
gi|295893072|gb|EFG72852.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
Length = 233
Score = 41.3 bits (95), Expect = 0.048, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 45/118 (38%), Gaps = 5/118 (4%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLI 85
+ S+ + ++ + F++ + P +VL+ + L + L+
Sbjct: 100 APLQDKRQIAISNAAQGVEIAINAKILFNSGDARLLPESFEVLNQIAGVLRDRSKNNILV 159
Query: 86 EGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
EGH D + S+ L RA AV +F +GI A RM P + G D
Sbjct: 160 EGHTDNVPISTAKYESNWELSSARAGAVVRFFADKGIEAHRMAAIGRADNFPLIIGDD 217
>gi|312115287|ref|YP_004012883.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100]
gi|311220416|gb|ADP71784.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100]
Length = 358
Score = 41.3 bits (95), Expect = 0.049, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 50/140 (35%), Gaps = 9/140 (6%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
S ++ + + E S+ D FD S +P + V++ +G + K+
Sbjct: 219 QSNLPQSFRVQVSVAGVAEGTLISLMDDTKRSMFDVGSAMPKPDTVLVMTRIGDIISKYP 278
Query: 81 CDFLIEGHADELG---SRNSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVY 136
+I G+ D R + L +RA F I R + + Y P
Sbjct: 279 GKIIIRGYTDGRPFAGDRYGNWVLSSQRARMAFLMLARGKIGDGRVLSIEGYADRQPR-- 336
Query: 137 GHDEDAYAKNRRAIVFLKGC 156
D+ +NRR V LK
Sbjct: 337 NADDPLAPENRRIEVLLKDS 356
>gi|330978961|gb|EGH78020.1| flagellar motor protein MotB [Pseudomonas syringae pv. aptata str.
DSM 50252]
Length = 346
Score = 40.9 bits (94), Expect = 0.049, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 45/142 (31%), Gaps = 10/142 (7%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ ++ + Q+ + D FD+ S ++P +L L ++
Sbjct: 135 NPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDSGSARLKPYFEDILLALADTIKSVPN 194
Query: 82 DFLIEGHADELGSR----NSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVY 136
I GH D + L RA A VA S++ +V Y
Sbjct: 195 KVSISGHTDATPFVGSGGFGNWELSANRANAARRALVAGTYPDSQVARVVGYASSA-LYD 253
Query: 137 GHDEDAYAKNRRAIVFLKGCRA 158
+ NRR + + +A
Sbjct: 254 HQNPTN-PINRRIDIVVLTKKA 274
>gi|162147455|ref|YP_001601916.1| chemotaxis protein motB (motility protein B) [Gluconacetobacter
diazotrophicus PAl 5]
gi|209545564|ref|YP_002277793.1| OmpA/MotB domain-containing protein [Gluconacetobacter
diazotrophicus PAl 5]
gi|161786032|emb|CAP55614.1| putative chemotaxis protein motB (Motility protein B)
[Gluconacetobacter diazotrophicus PAl 5]
gi|209533241|gb|ACI53178.1| OmpA/MotB domain protein [Gluconacetobacter diazotrophicus PAl 5]
Length = 368
Score = 40.9 bits (94), Expect = 0.049, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 37/110 (33%), Gaps = 7/110 (6%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR------NSSIALG 102
++ FD+ S + Q+L+ + +WL I G+ D S+ L
Sbjct: 220 NNTPMFDSGSATPNRLGKQMLAQIAAWLAPMPEPISIVGYTDGAPYHVGRQWGMSNWTLS 279
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ RA V G + S + D A NRR ++
Sbjct: 280 VMRADHARETLVQAGYPDRNILDVSGRSDRDLALPSDPSG-AGNRRVVLI 328
>gi|110678461|ref|YP_681468.1| OmpA family domain-containing protein [Roseobacter denitrificans
OCh 114]
gi|109454577|gb|ABG30782.1| OmpA family domain protein [Roseobacter denitrificans OCh 114]
Length = 221
Score = 40.9 bits (94), Expect = 0.049, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 5/106 (4%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKH--DCDFLIEGHADELGSRNSSIALGLRRAYA 108
++ FD S + + + L+++ ++ G D +G + LGLRRA A
Sbjct: 24 TINFDFDSAELDAEAQAKIVEIAEQLKENPSYKPTVLIGFTDAVGGVGYNDQLGLRRANA 83
Query: 109 VFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V + +G+S R+ V+S G+ V + NRR V L
Sbjct: 84 VSAALLEQGVSVDRIGTVSSRGERELLVSVAGPE--RLNRRVTVTL 127
>gi|28872066|ref|NP_794685.1| chemotaxis motB protein [Pseudomonas syringae pv. tomato str.
DC3000]
gi|301384434|ref|ZP_07232852.1| flagellar motor protein MotB [Pseudomonas syringae pv. tomato
Max13]
gi|302132278|ref|ZP_07258268.1| flagellar motor protein MotB [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|28855319|gb|AAO58380.1| chemotaxis motB protein [Pseudomonas syringae pv. tomato str.
DC3000]
gi|331014600|gb|EGH94656.1| flagellar motor protein MotB [Pseudomonas syringae pv. lachrymans
str. M302278PT]
Length = 341
Score = 40.9 bits (94), Expect = 0.049, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 45/142 (31%), Gaps = 10/142 (7%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ ++ + Q+ + D FD+ S ++P +L L +
Sbjct: 135 NPQLQKFKDQILFEITQDGLRIQIMDADNRPMFDSGSARLKPYFEDILLALADTIRSVPN 194
Query: 82 DFLIEGHADELG----SRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVY 136
I GH D + + L RA A VA S++ +V Y
Sbjct: 195 KISISGHTDATPFVGNNGFGNWELSANRANAARRALVAGTYPDSQVARVVGYASSA-LYD 253
Query: 137 GHDEDAYAKNRRAIVFLKGCRA 158
+ NRR + + +A
Sbjct: 254 RENPTN-PVNRRIDIVVLTKKA 274
>gi|330939854|gb|EGH43087.1| flagellar motor protein MotB [Pseudomonas syringae pv. pisi str.
1704B]
Length = 333
Score = 40.9 bits (94), Expect = 0.050, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 45/142 (31%), Gaps = 10/142 (7%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ ++ + Q+ + D FD+ S ++P +L L ++
Sbjct: 122 NPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDSGSARLKPYFEDILLALADTIKSVPN 181
Query: 82 DFLIEGHADELGSR----NSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVY 136
I GH D + L RA A VA S++ +V Y
Sbjct: 182 KVSISGHTDATPFVGSGGFGNWELSANRANAARRALVAGTYPDSQVARVVGYASSA-LYD 240
Query: 137 GHDEDAYAKNRRAIVFLKGCRA 158
+ NRR + + +A
Sbjct: 241 HQNPTN-PINRRIDIVVLTKKA 261
>gi|270619331|ref|ZP_06221809.1| outer membrane protein P6 [Haemophilus influenzae HK1212]
gi|270317848|gb|EFA29196.1| outer membrane protein P6 [Haemophilus influenzae HK1212]
Length = 31
Score = 40.9 bits (94), Expect = 0.050, Method: Composition-based stats.
Identities = 17/27 (62%), Positives = 22/27 (81%)
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIV 151
SYG+E P+V GHDE AY+KNRRA++
Sbjct: 3 TVSYGEEKPAVLGHDEAAYSKNRRAVL 29
>gi|84687224|ref|ZP_01015105.1| Outer membrane protein, OmpA/MotB family protein [Maritimibacter
alkaliphilus HTCC2654]
gi|84664812|gb|EAQ11295.1| Outer membrane protein, OmpA/MotB family protein [Rhodobacterales
bacterium HTCC2654]
Length = 647
Score = 40.9 bits (94), Expect = 0.051, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 61/145 (42%), Gaps = 8/145 (5%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS 70
+A+ ++ +D + S V S +++ D++ FDT S IR + L+
Sbjct: 495 AALREALMASMDRDPGRTYSLRQVRQFSGVRDLAPVIEVDAITFDTGSAVIRSGQAEELA 554
Query: 71 NLGSWLE-----KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI-SASRMK 124
LG + + D FLIEGH D +G ++AL RRA +V M
Sbjct: 555 ALGQAIRSVIEERPDAVFLIEGHTDAVGGAAYNLALSDRRAESVALALTEYFDVPPENMI 614
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRA 149
YG+ + +A +NRRA
Sbjct: 615 TQGYGESELKIV--TSEAERQNRRA 637
>gi|90418368|ref|ZP_01226280.1| putative chemotaxis protein motB [Aurantimonas manganoxydans
SI85-9A1]
gi|90338040|gb|EAS51691.1| putative chemotaxis protein motB [Aurantimonas manganoxydans
SI85-9A1]
Length = 413
Score = 40.9 bits (94), Expect = 0.051, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 39/105 (37%), Gaps = 6/105 (5%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS---RNSSIALGLRRAYAV 109
F+ S P + ++ + S L K + I GH D + + L RA+
Sbjct: 306 MFEVGSARPTPQVVAMMERIASVLSKQPGNVSIRGHTDSRPFRSAQYDNWRLSTARAHMA 365
Query: 110 FNYFVARGISASRMKVT-SYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ G+ R+K P + D +A A NRR + L
Sbjct: 366 YYMLARGGLDEDRVKAIEGVADRAPKIA-DDPEA-AANRRIEILL 408
>gi|83311569|ref|YP_421833.1| Outer membrane protein and related peptidoglycan-associated lipo
protein [Magnetospirillum magneticum AMB-1]
gi|82946410|dbj|BAE51274.1| Outer membrane protein and related peptidoglycan-associated lipo
protein [Magnetospirillum magneticum AMB-1]
Length = 239
Score = 40.9 bits (94), Expect = 0.052, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 56/165 (33%), Gaps = 17/165 (10%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISS------------PDTVLNESSLQEQFSSSV 48
M+ + L+A+ +S + ++ + +
Sbjct: 1 MKLIHLITALTALVAVSACAEMEPMERPTTSTPMVTAPPPPAAPVPSAPMAADDVALPPS 60
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAY 107
V F+ + I + +QVL L L+ ++G D G + L +RA
Sbjct: 61 PVVVHFNHAKADITGSTMQVLWGLAPALKAAEPGVIRVQGFTDASGKAAYNRILSEKRAQ 120
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
AV + G++A R++V+ G GH + RR +
Sbjct: 121 AVADQLRKLGVTA-RIEVSGQGIVKGGKKGHKDQGA---RRVEIT 161
>gi|289672567|ref|ZP_06493457.1| flagellar motor protein MotB [Pseudomonas syringae pv. syringae
FF5]
Length = 240
Score = 40.9 bits (94), Expect = 0.053, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 45/142 (31%), Gaps = 10/142 (7%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ ++ + Q+ + D FD+ S ++P +L L ++
Sbjct: 81 NPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDSGSARLKPYFEDILLALADTIKSVPN 140
Query: 82 DFLIEGHADELGSR----NSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVY 136
I GH D + L RA A VA S++ +V Y
Sbjct: 141 KVSISGHTDATPFVGSGGFGNWELSANRANAARRALVAGTYPDSQVARVVGYASSA-LYD 199
Query: 137 GHDEDAYAKNRRAIVFLKGCRA 158
+ NRR + + +A
Sbjct: 200 HQNPTN-PINRRIDIVVLTKKA 220
>gi|300024596|ref|YP_003757207.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888]
gi|299526417|gb|ADJ24886.1| OmpA/MotB domain protein [Hyphomicrobium denitrificans ATCC 51888]
Length = 424
Score = 40.9 bits (94), Expect = 0.053, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 50/143 (34%), Gaps = 9/143 (6%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSV---GDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+ K S + + E S+ D F+ S RPA + +S +G L+
Sbjct: 283 SSALAKGSRAAPEIEVKATSEGLLVSLLDGADFGMFEVGSAKPRPALVLAMSKVGDVLKS 342
Query: 79 HDCDFLIEGHADELGS---RNSSIALGLRRAYAVFNYFVARGISASRMKVT-SYGKEMPS 134
++ GH D + L RA + V GI+ +R P
Sbjct: 343 LPGSIVVRGHTDSRAYKNGNYDNWRLSAARAQMAYYMLVRGGIAETRFAAIEGRADRDPK 402
Query: 135 VYGHDEDAYAKNRRAIVFLKGCR 157
+ + E +NRR + +K +
Sbjct: 403 IPSNREA--PENRRIDILIKEVK 423
>gi|313674265|ref|YP_004052261.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
gi|312940963|gb|ADR20153.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
Length = 571
Score = 40.9 bits (94), Expect = 0.054, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 41/100 (41%), Gaps = 1/100 (1%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHA 89
D L L + + V+F+ +S I + Q L + ++L+ H I A
Sbjct: 448 TDEQLEVKRLIDSVLNISAYQVYFEVNSSEIDESHDQKLIEMANFLKSHQNLGVQISAFA 507
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
G+ + L RRA +V +F GI + R+ +G
Sbjct: 508 SSDGNPKYNYELSNRRAQSVLKFFKENGIESDRLAARGFG 547
>gi|115377102|ref|ZP_01464317.1| OmpA/MotB [Stigmatella aurantiaca DW4/3-1]
gi|310822806|ref|YP_003955164.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
gi|115365877|gb|EAU64897.1| OmpA/MotB [Stigmatella aurantiaca DW4/3-1]
gi|309395878|gb|ADO73337.1| OmpA family protein [Stigmatella aurantiaca DW4/3-1]
Length = 381
Score = 40.9 bits (94), Expect = 0.054, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 9/112 (8%)
Query: 50 DSVFFDTSSYSIRPADIQVLSN--------LGSWLEKHDCDFLIEGHADELGSRNSSIAL 101
+ V F + S + + L + + + + GH D +G+ S+ L
Sbjct: 252 EEVNFASGSAELAVGERGKLDHSHARIAEAVSRYGRFAALRLYVLGHTDSVGATASNREL 311
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L+RA ++ YF RG+ + +G++ P+V DE A NRRA L
Sbjct: 312 SLQRARSIAAYFHKRGLRLP-IFYEGFGEQAPAVMTPDETAEVGNRRAEYIL 362
>gi|330965971|gb|EGH66231.1| flagellar motor protein MotB [Pseudomonas syringae pv. actinidiae
str. M302091]
Length = 341
Score = 40.9 bits (94), Expect = 0.054, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 45/142 (31%), Gaps = 10/142 (7%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ ++ + Q+ + D FD+ S ++P +L L +
Sbjct: 135 NPQLQKFKDQILFEITQDGLRIQIMDADNRPMFDSGSARLKPYFEDILLALADTIRSVPN 194
Query: 82 DFLIEGHADELG----SRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVY 136
I GH D + + L RA A VA S++ +V Y
Sbjct: 195 KISISGHTDATPFVGNNGFGNWELSANRANAARRALVAGTYPDSQVARVVGYASSA-LYD 253
Query: 137 GHDEDAYAKNRRAIVFLKGCRA 158
+ NRR + + +A
Sbjct: 254 HENPTN-PVNRRIDIVVLTKKA 274
>gi|289450247|ref|YP_003475125.1| extracellular solute-binding protein [Clostridiales genomosp. BVAB3
str. UPII9-5]
gi|289184794|gb|ADC91219.1| bacterial extracellular solute-binding protein [Clostridiales
genomosp. BVAB3 str. UPII9-5]
Length = 442
Score = 40.9 bits (94), Expect = 0.054, Method: Composition-based stats.
Identities = 15/109 (13%), Positives = 38/109 (34%), Gaps = 1/109 (0%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDS-VFFDTSSY 59
M+ + ++ S M+++S + + S+ + +S S + V + Y
Sbjct: 1 MKKAISYMACSMAAMLALSACSSTASPASTTASPSEAASTDSTAVSETSNKPVIITFAQY 60
Query: 60 SIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
S + Q L + K + + I+ + + + + A
Sbjct: 61 SGSGDNEQYLKQMVDKYMKENPNVTIDLQTYGYDNYFTQMTAKVSGGQA 109
>gi|325291956|ref|YP_004277820.1| flagellar motor protein MotB [Agrobacterium sp. H13-3]
gi|27763656|gb|AAO20254.1| MotB [Agrobacterium sp. H13-3]
gi|325059809|gb|ADY63500.1| flagellar motor protein MotB [Agrobacterium sp. H13-3]
Length = 428
Score = 40.9 bits (94), Expect = 0.054, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 53/131 (40%), Gaps = 9/131 (6%)
Query: 35 LNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE 91
L + + ++ D F+ S R + + +G L++ +I GH D
Sbjct: 300 LVVTPAEGGLLLTISDQTETPMFNVGSAVPRGEMVLAMEKIGKLLQERGGSVVIRGHTDG 359
Query: 92 LGSR---NSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNR 147
+ N + L + RA++ + V G+S R+ +V+ + V D A A NR
Sbjct: 360 RQFKGEANDNWRLSMDRAHSAYYMLVRGGLSEERVKQVSGFADRRLQVP-ADPLANA-NR 417
Query: 148 RAIVFLKGCRA 158
R + L+ R
Sbjct: 418 RIEILLEADRG 428
>gi|237798269|ref|ZP_04586730.1| flagellar motor protein MotB [Pseudomonas syringae pv. oryzae str.
1_6]
gi|331021121|gb|EGI01178.1| flagellar motor protein MotB [Pseudomonas syringae pv. oryzae str.
1_6]
Length = 346
Score = 40.9 bits (94), Expect = 0.055, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 45/142 (31%), Gaps = 10/142 (7%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ ++ + Q+ + D FD+ S ++P +L L ++
Sbjct: 135 NPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDSGSARLKPYFEDILLALADTIKSVPN 194
Query: 82 DFLIEGHADELGSR----NSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVY 136
I GH D + L RA A VA +++ +V Y
Sbjct: 195 KVSISGHTDATPFVGSGGFGNWELSANRANAARRALVAGTYPDAQVARVVGYASSA-LYD 253
Query: 137 GHDEDAYAKNRRAIVFLKGCRA 158
+ NRR + + +A
Sbjct: 254 HENPTN-PVNRRIDIVVLTKKA 274
>gi|86749921|ref|YP_486417.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
gi|86572949|gb|ABD07506.1| OmpA/MotB [Rhodopseudomonas palustris HaA2]
Length = 274
Score = 40.9 bits (94), Expect = 0.056, Method: Composition-based stats.
Identities = 29/151 (19%), Positives = 44/151 (29%), Gaps = 10/151 (6%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
A+ S+ ++S + + + D F S
Sbjct: 113 FALASASLRQALQDVPELSELSKNVVFEETPTGLNLELTDQDGRPMFADGSSVPYERTRL 172
Query: 68 VLSNLGSWLEKHDCDFLIEGHADEL----GSRNSSIALGLRRAYAVFNYFVARGISASR- 122
+++ L + L I GH S L RA AV G+S++R
Sbjct: 173 LIAKLAAPLRATSLRVNIVGHTAATAVPANGDYDSFDLSTGRANAVRQILKREGLSSNRV 232
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
M V G P A NRR + L
Sbjct: 233 MSVAGKGDGEPLFPE--APMLAANRRVTISL 261
>gi|86131085|ref|ZP_01049684.1| OmpA family protein [Dokdonia donghaensis MED134]
gi|85818496|gb|EAQ39656.1| OmpA family protein [Dokdonia donghaensis MED134]
Length = 278
Score = 40.9 bits (94), Expect = 0.056, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 43/119 (36%), Gaps = 4/119 (3%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVL-SNLGSWLEKHDCDFLIEGHADELGSRNSS 98
+Q FF+T ++ + L + S D I G+ D+ G+ +
Sbjct: 1 MQAFAQVDKTHETFFETDKSNLVAIENAKLERFITSLPLDKIEDISIYGYCDDRGTDAYN 60
Query: 99 IALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMP--SVYGHDEDAYAKNRRAIVFLK 154
L RA + FV RGI+ S +K G+ + E NR+ + +
Sbjct: 61 NWLSQERANTIKQKFVDRGIADSIIKNSDGKGELLLTRLDDVGSEVQRTLNRKVEIIVS 119
>gi|330960099|gb|EGH60359.1| flagellar motor protein MotB [Pseudomonas syringae pv. maculicola
str. ES4326]
Length = 341
Score = 40.9 bits (94), Expect = 0.056, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 45/142 (31%), Gaps = 10/142 (7%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ ++ + Q+ + D FD+ S ++P +L L ++
Sbjct: 135 NPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDSGSARLKPYFEDILLALADTIKSVPN 194
Query: 82 DFLIEGHADELGSR----NSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVY 136
I GH D + L RA A VA S++ +V Y
Sbjct: 195 KISISGHTDATPFVGSGGFGNWELSANRANAARRALVAGTYPDSQVARVVGYASSA-LYD 253
Query: 137 GHDEDAYAKNRRAIVFLKGCRA 158
+ NRR + + +A
Sbjct: 254 HENPTN-PVNRRIDIVVLTKKA 274
>gi|220934494|ref|YP_002513393.1| chemotaxis MotB protein [Thioalkalivibrio sp. HL-EbGR7]
gi|219995804|gb|ACL72406.1| chemotaxis MotB protein [Thioalkalivibrio sp. HL-EbGR7]
Length = 290
Score = 40.9 bits (94), Expect = 0.057, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 41/122 (33%), Gaps = 9/122 (7%)
Query: 40 LQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS-- 94
E + D FD S +R +L LG + + I GH D
Sbjct: 150 TPEGLRIQIVDKENRPMFDLGSAQLRGYSTAILQELGGLINQVPNKISITGHTDARPFLR 209
Query: 95 -RNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
S+ L RA A V+ G+ +++ +V + + + NRR +
Sbjct: 210 PNYSNWELSSDRANAARRALVSGGMDEAKIGRVVGLASTV-LFDKANPEN-PINRRISII 267
Query: 153 LK 154
+
Sbjct: 268 VM 269
>gi|218674237|ref|ZP_03523906.1| outer membrane lipoprotein [Rhizobium etli GR56]
Length = 32
Score = 40.9 bits (94), Expect = 0.057, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
SYGKE P D +++NRRA+ L G
Sbjct: 1 SYGKERPVAVCDDISCWSQNRRAVTVLGGA 30
>gi|319409174|emb|CBI82818.1| putative flagellar motor protein MotB [Bartonella schoenbuchensis
R1]
Length = 396
Score = 40.9 bits (94), Expect = 0.058, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 41/106 (38%), Gaps = 6/106 (5%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG---SRNSSIALGLRRAYAV 109
F S ++ + + + KH + ++ GH D + + L RA V
Sbjct: 259 MFKVGSSVPTAQTVEFIDRIAKVIAKHPGNVVVGGHTDARPYRSTTRDNWQLSTSRAQMV 318
Query: 110 FNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ V G+ R+ +V Y D A ++NRR +F++
Sbjct: 319 YYMLVRGGLDEKRILRVEGYADRN-LKNKQDPYA-SENRRTSIFVR 362
>gi|85374663|ref|YP_458725.1| putative outer membrane lipoprotein [Erythrobacter litoralis
HTCC2594]
gi|84787746|gb|ABC63928.1| putative outer membrane lipoprotein [Erythrobacter litoralis
HTCC2594]
Length = 242
Score = 40.9 bits (94), Expect = 0.058, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 52/134 (38%), Gaps = 3/134 (2%)
Query: 21 IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
D + + + + + ++ F+ SS ++ ++L + + L
Sbjct: 94 TDGTMLAEAGEAPLESLRCQDDVQAILTARTLRFEESSAALAAGGTELLDEVAAALRPCY 153
Query: 81 CDFL-IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
+ I GH D G ++I L RRA AV VARG+ +++ G P G D
Sbjct: 154 GAIIAITGHTDTSGDEPANIVLSRRRAAAVERALVARGVPEESLRINGLGSSQPV-QGLD 212
Query: 140 EDAYAKNRRAIVFL 153
A NRR +
Sbjct: 213 PADPA-NRRIEFSV 225
>gi|306841163|ref|ZP_07473879.1| lipoprotein [Brucella sp. BO2]
gi|306288789|gb|EFM60107.1| lipoprotein [Brucella sp. BO2]
Length = 129
Score = 40.9 bits (94), Expect = 0.059, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 41/137 (29%), Gaps = 17/137 (12%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ ++ T+ ++ S V + + +L +
Sbjct: 2 QVFPQEPTAQATMWPARPPKQTISVYFPQDVTVFRPTSAQINQLHTLLWPV-------PK 54
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK-----VTSYGKEMPSVY 136
+ G D + RA A++N+ + +G+ AS++ V Y P
Sbjct: 55 HINVRGLTDNNCPTPGDTQVARVRALAIYNWLINQGVPASKITISYAPVKDYASNAPLSP 114
Query: 137 GHDEDAYAKNRRAIVFL 153
NRR + +
Sbjct: 115 -----GRVLNRRVDIEI 126
>gi|224371626|ref|YP_002605790.1| putative chemotaxis protein [Desulfobacterium autotrophicum HRM2]
gi|223694343|gb|ACN17626.1| putative chemotaxis protein [Desulfobacterium autotrophicum HRM2]
Length = 310
Score = 40.9 bits (94), Expect = 0.059, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 14/118 (11%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-NSSIAL 101
V + F +I + L + + ++ ++ + G D S+ S+I L
Sbjct: 194 GLRLEVQLPILFAPGRSTIIGSYEGFLEKIATLVKPYEVFVHVNGVTDGAKSKKISNIDL 253
Query: 102 GLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAY------AKNRRAIVFL 153
G RRA A+ N V G+ S K+TS G+ E ++ + NRRA + +
Sbjct: 254 GARRATAIVNRLVKYGLPPSIFKITSRGEY-------SEGSHMKVNSPSLNRRAEITV 304
>gi|83593747|ref|YP_427499.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170]
gi|83576661|gb|ABC23212.1| OmpA/MotB [Rhodospirillum rubrum ATCC 11170]
Length = 347
Score = 40.9 bits (94), Expect = 0.062, Method: Composition-based stats.
Identities = 28/158 (17%), Positives = 65/158 (41%), Gaps = 14/158 (8%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDS-------VFFDTSSYSIRP 63
A+ + SG +D+ + L S+++ ++ V+F +SS +
Sbjct: 190 PAMPAVPGSGTVVIDSAGVHQENSLQGSAVRRLDEAAALAGGGAKVGVVYFASSSSDLDN 249
Query: 64 ADIQVLSNLGSWLEKHDCDFLIEGHA-------DELGSRNSSIALGLRRAYAVFNYFVAR 116
D++V++ + + ++ + GH+ D + + ++ + RA AV ++
Sbjct: 250 NDLRVIAEIADYQRENGGVLRVIGHSSSRTGDMDPVSHKILNLRVSAERADAVAQALMSA 309
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G+ + + V + + A NRRA +FL+
Sbjct: 310 GVFPANIVVGAVADDQKEYREVMPSGEAFNRRAEIFLE 347
>gi|304412488|ref|ZP_07394094.1| OmpA/MotB domain protein [Shewanella baltica OS183]
gi|307307147|ref|ZP_07586885.1| OmpA/MotB domain protein [Shewanella baltica BA175]
gi|304349130|gb|EFM13542.1| OmpA/MotB domain protein [Shewanella baltica OS183]
gi|306910386|gb|EFN40817.1| OmpA/MotB domain protein [Shewanella baltica BA175]
Length = 306
Score = 40.9 bits (94), Expect = 0.062, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 55/151 (36%), Gaps = 9/151 (5%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSN 71
+ ++ N + SS + + + + + D+V F S ++P ++L +
Sbjct: 127 LTVLARELNRVVQNSSMAENIAVTIVPQGIRILIHDNVNQFMFTRGSAQMQPYFEELLLS 186
Query: 72 LGSWLEKHDCDFLIEGHADELGSR---NSSIALGLRRAYAVFNYFVARGISASR-MKVTS 127
LG L+ +I GH D ++ L RA G+ + ++VT
Sbjct: 187 LGPILKNVTNSMVISGHTDSTPYAGNLFTNWELSSERALLARRVLERGGVKRDQVIQVTG 246
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
++P + A NRR + A
Sbjct: 247 MADQIPYIATDTAA--AANRRIEALILTSSA 275
>gi|326317265|ref|YP_004234937.1| OmpA/MotB domain-containing protein [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323374101|gb|ADX46370.1| OmpA/MotB domain protein [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 177
Score = 40.9 bits (94), Expect = 0.062, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 8/138 (5%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL 76
+ + + + + + + +F + + ++++ +
Sbjct: 44 AAEPTPAAEVVAPAGTLDITGNEVARVVVAGSVVKFYFASGRADLTADAAPAIADVVRAV 103
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP-SV 135
+ + +I G D G ++ L +RA AV + VA G R+++ P
Sbjct: 104 KDGNRRVVISGFHDATGDAVANAELARQRAQAVRDALVAAGAPEDRIELR-----KPELA 158
Query: 136 YGHDEDAYAKNRRAIVFL 153
G A A RR V L
Sbjct: 159 QGDGNAAEA--RRVEVTL 174
>gi|220921404|ref|YP_002496705.1| OmpA/MotB domain-containing protein [Methylobacterium nodulans ORS
2060]
gi|219946010|gb|ACL56402.1| OmpA/MotB domain protein [Methylobacterium nodulans ORS 2060]
Length = 213
Score = 40.9 bits (94), Expect = 0.062, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 48/135 (35%), Gaps = 6/135 (4%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS---WLEK 78
D L + S + + S+ V F +S +I + V+ LG+ +
Sbjct: 70 DTLRNRTSFSQAEREQLAAAAAERPSIDLDVPFAYNSATIGRTALPVVKMLGATLARPQL 129
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYG 137
LI GH D GS + L RRA AV Y V + + YGK
Sbjct: 130 ASSIILIVGHTDAKGSDRVNQLLSERRAEAVKQYIVQNYGVPAGNLVAVGYGKSR-LKDP 188
Query: 138 HDEDAYAKNRRAIVF 152
+ A A NRR
Sbjct: 189 ANPLAPA-NRRVTAV 202
>gi|319406989|emb|CBI80626.1| putative flagellar motor protein MotB [Bartonella sp. 1-1C]
Length = 384
Score = 40.9 bits (94), Expect = 0.063, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 6/110 (5%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG---SRNSSIALGLRRAYAV 109
F + ++S++ + K+ D +I GH D + + L RA
Sbjct: 247 MFKVGLSVPTARTVDLISSMAGIIAKYQGDVVISGHTDARPYRSTVYDNWQLSTARAQMA 306
Query: 110 FNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
+ V G R+ +V Y + + A A+NRR +F++ +A
Sbjct: 307 YYMLVRGGFDEKRILRVEGY-ADRDLKNKKNPYA-AENRRISIFIRDPKA 354
>gi|209964663|ref|YP_002297578.1| chemotaxis MotB protein [Rhodospirillum centenum SW]
gi|209958129|gb|ACI98765.1| chemotaxis MotB protein [Rhodospirillum centenum SW]
Length = 364
Score = 40.9 bits (94), Expect = 0.064, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 43/122 (35%), Gaps = 10/122 (8%)
Query: 40 LQEQFSSSVGDS---VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG--- 93
E + D F + S ++ P Q+++ + + K + GH D
Sbjct: 218 TPEGLRIQLVDQEGYSMFPSGSANMLPQTAQLMALVAQAVGKLPNHLSVSGHTDSTPFAA 277
Query: 94 -SRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
S S+ L RA A +A G+ +R+ +VT +NRR +
Sbjct: 278 GSSRSNWDLSTERANASVRALLAAGVPENRIDQVTGRADRDHLFPDDPRS--PRNRRVSI 335
Query: 152 FL 153
L
Sbjct: 336 VL 337
>gi|23013133|ref|ZP_00053071.1| COG1360: Flagellar motor protein [Magnetospirillum magnetotacticum
MS-1]
Length = 344
Score = 40.9 bits (94), Expect = 0.064, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 11/137 (8%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDS---VFFDTSSYSIRPADIQVLSNLGSWLEK-HDC 81
++ + + E + D F + S + +L + + + D
Sbjct: 183 PEMKQFQGSMLVDNTPEGLRIQITDQEGLAMFPSGSSAPFGHTRAMLDLVSRVVRQLPDN 242
Query: 82 DFLIEGHADE----LGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVY 136
I GH D S ++ L RA A +A G+ R+ ++ + P
Sbjct: 243 RIAISGHTDAVPFRDPSGYTNWELSADRALATRRALIASGVPEGRIDRIVGRADQEPLDK 302
Query: 137 GHDEDAYAKNRRAIVFL 153
D +NRR + L
Sbjct: 303 -ADPKGL-RNRRISIIL 317
>gi|226953610|ref|ZP_03824074.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244]
gi|226835644|gb|EEH68027.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244]
Length = 79
Score = 40.9 bits (94), Expect = 0.064, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA-RGISASRMKVTSYGKEMPSV 135
E + IEGH D G R + L L RA +V + V + ASR+ + + P
Sbjct: 13 EYPNATARIEGHTDNTGPRALNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIA 72
Query: 136 YGHDEDA 142
++
Sbjct: 73 DNKTKEG 79
>gi|86356325|ref|YP_468217.1| flagellar motor protein MotB [Rhizobium etli CFN 42]
gi|86280427|gb|ABC89490.1| chemotaxis motility protein [Rhizobium etli CFN 42]
Length = 436
Score = 40.9 bits (94), Expect = 0.064, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 43/109 (39%), Gaps = 4/109 (3%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS---RNSSIALGLRR 105
D F+ S R + + +G+ L++ I GH D +N + L + R
Sbjct: 327 NDDSMFNIGSAVPRQEMVLAMEKIGTILKERGGAVAIRGHTDGRQYKGGQNENWRLSMDR 386
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
A + + V G++ +R+ S + D A NRR + ++
Sbjct: 387 AQSAYYMLVRGGLNETRVSQVSGFADRRLKLPADPFN-AANRRIEILVQ 434
>gi|126176136|ref|YP_001052285.1| OmpA/MotB domain-containing protein [Shewanella baltica OS155]
gi|125999341|gb|ABN63416.1| OmpA/MotB domain protein [Shewanella baltica OS155]
Length = 306
Score = 40.9 bits (94), Expect = 0.064, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 55/151 (36%), Gaps = 9/151 (5%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSN 71
+ ++ N + SS + + + + + D+V F S ++P ++L +
Sbjct: 127 LTVLARELNRVVQNSSMAENIAVTIVPQGIRILIHDNVNQFMFTRGSAQMQPYFEELLLS 186
Query: 72 LGSWLEKHDCDFLIEGHADELGSR---NSSIALGLRRAYAVFNYFVARGISASR-MKVTS 127
LG L+ +I GH D ++ L RA G+ + ++VT
Sbjct: 187 LGPILKNVTNSMVISGHTDSTPYAGNLFTNWELSSERALLARRVLERGGVKRDQVIQVTG 246
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
++P + A NRR + A
Sbjct: 247 MADQIPYIATDTAA--AANRRIEALILTSSA 275
>gi|330984570|gb|EGH82673.1| flagellar motor protein MotB [Pseudomonas syringae pv. lachrymans
str. M301315]
Length = 344
Score = 40.6 bits (93), Expect = 0.065, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 45/142 (31%), Gaps = 10/142 (7%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ ++ + Q+ + D FD+ S ++P +L + ++
Sbjct: 135 NPQLQKFKDQILFEITQDGLRIQIMDADNRPMFDSGSARLKPYFEDILLAMADTIKSVPN 194
Query: 82 DFLIEGHADELGSR----NSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVY 136
I GH D + L RA A VA S++ +V Y
Sbjct: 195 KISISGHTDATPFVGNGGFGNWELSANRANAARRALVAGTYPDSQVARVVGYASSA-LYD 253
Query: 137 GHDEDAYAKNRRAIVFLKGCRA 158
+ NRR + + +A
Sbjct: 254 HENPTN-PVNRRIDIVVLTKKA 274
>gi|302189799|ref|ZP_07266472.1| flagellar motor protein MotB [Pseudomonas syringae pv. syringae
642]
Length = 349
Score = 40.6 bits (93), Expect = 0.065, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 45/142 (31%), Gaps = 10/142 (7%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ ++ + Q+ + D FD+ S ++P +L L ++
Sbjct: 135 NPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDSGSARLKPYFEDILLALADTIKSVPN 194
Query: 82 DFLIEGHADELGSR----NSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVY 136
I GH D + L RA A VA S++ +V Y
Sbjct: 195 KVSISGHTDATPFVGSGGFGNWELSANRANAARRALVAGTYPDSQVARVVGYASSA-LYD 253
Query: 137 GHDEDAYAKNRRAIVFLKGCRA 158
+ NRR + + +A
Sbjct: 254 HQNPTN-PINRRIDIVVLTRKA 274
>gi|226327780|ref|ZP_03803298.1| hypothetical protein PROPEN_01653 [Proteus penneri ATCC 35198]
gi|225203484|gb|EEG85838.1| hypothetical protein PROPEN_01653 [Proteus penneri ATCC 35198]
Length = 350
Score = 40.6 bits (93), Expect = 0.065, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 42/121 (34%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS-----RNSS 98
+ F S ++ P +L+ + L + GH D++ + S+
Sbjct: 148 QIIDKANRPMFRVGSATVEPYMKDILTAIAPILNDTPYKISLSGHTDDIPYASGAFKYSN 207
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A + G++ + ++V + V A NRR + + +
Sbjct: 208 WELSTDRANASRRELIGAGLNEWKVLRVVGMASTVHLVKEDGFA--AANRRISILVLTKQ 265
Query: 158 A 158
A
Sbjct: 266 A 266
>gi|71737470|ref|YP_272857.1| flagellar motor protein MotB [Pseudomonas syringae pv. phaseolicola
1448A]
gi|71558023|gb|AAZ37234.1| motility protein, MotA family [Pseudomonas syringae pv.
phaseolicola 1448A]
Length = 341
Score = 40.6 bits (93), Expect = 0.065, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 45/142 (31%), Gaps = 10/142 (7%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ ++ + Q+ + D FD+ S ++P +L + ++
Sbjct: 135 NPQLQKFKDQILFEITQDGLRIQIMDADNRPMFDSGSARLKPYFEDILLAMADTIKSVPN 194
Query: 82 DFLIEGHADELGSR----NSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVY 136
I GH D + L RA A VA S++ +V Y
Sbjct: 195 KISISGHTDATPFVGNGGFGNWELSANRANAARRALVAGTYPDSQVARVVGYASSA-LYD 253
Query: 137 GHDEDAYAKNRRAIVFLKGCRA 158
+ NRR + + +A
Sbjct: 254 HENPTN-PVNRRIDIVVLTKKA 274
>gi|330886588|gb|EGH20249.1| flagellar motor protein MotB [Pseudomonas syringae pv. mori str.
301020]
Length = 341
Score = 40.6 bits (93), Expect = 0.065, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 45/142 (31%), Gaps = 10/142 (7%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ ++ + Q+ + D FD+ S ++P +L + ++
Sbjct: 135 NPQLQKFKDQILFEITQDGLRIQIMDADNRPMFDSGSARLKPYFEDILLAMADTIKSVPN 194
Query: 82 DFLIEGHADELGSR----NSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVY 136
I GH D + L RA A VA S++ +V Y
Sbjct: 195 KISISGHTDATPFVGNGGFGNWELSANRANAARRALVAGTYPDSQVARVVGYASSA-LYD 253
Query: 137 GHDEDAYAKNRRAIVFLKGCRA 158
+ NRR + + +A
Sbjct: 254 HENPTN-PVNRRIDIVVLTKKA 274
>gi|298484924|ref|ZP_07003023.1| Flagellar motor rotation protein motB [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298160611|gb|EFI01633.1| Flagellar motor rotation protein motB [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 341
Score = 40.6 bits (93), Expect = 0.065, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 45/142 (31%), Gaps = 10/142 (7%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ ++ + Q+ + D FD+ S ++P +L + ++
Sbjct: 135 NPQLQKFKDQILFEITQDGLRIQIMDADNRPMFDSGSARLKPYFEDILLAMADTIKSVPN 194
Query: 82 DFLIEGHADELGSR----NSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVY 136
I GH D + L RA A VA S++ +V Y
Sbjct: 195 KISISGHTDATPFVGNGGFGNWELSANRANAARRALVAGTYPDSQVARVVGYASSA-LYD 253
Query: 137 GHDEDAYAKNRRAIVFLKGCRA 158
+ NRR + + +A
Sbjct: 254 HENPTN-PVNRRIDIVVLTKKA 274
>gi|257482421|ref|ZP_05636462.1| flagellar motor protein MotB [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|331009754|gb|EGH89810.1| flagellar motor protein MotB [Pseudomonas syringae pv. tabaci ATCC
11528]
Length = 341
Score = 40.6 bits (93), Expect = 0.065, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 45/142 (31%), Gaps = 10/142 (7%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ ++ + Q+ + D FD+ S ++P +L + ++
Sbjct: 135 NPQLQKFKDQILFEITQDGLRIQIMDADNRPMFDSGSARLKPYFEDILLAMADTIKSVPN 194
Query: 82 DFLIEGHADELGSR----NSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVY 136
I GH D + L RA A VA S++ +V Y
Sbjct: 195 KISISGHTDATPFVGNGGFGNWELSANRANAARRALVAGTYPDSQVARVVGYASSA-LYD 253
Query: 137 GHDEDAYAKNRRAIVFLKGCRA 158
+ NRR + + +A
Sbjct: 254 HENPTN-PVNRRIDIVVLTKKA 274
>gi|289648637|ref|ZP_06479980.1| flagellar motor protein MotB [Pseudomonas syringae pv. aesculi str.
2250]
Length = 350
Score = 40.6 bits (93), Expect = 0.066, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 45/142 (31%), Gaps = 10/142 (7%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ ++ + Q+ + D FD+ S ++P +L + ++
Sbjct: 135 NPQLQKFKDQILFEITQDGLRIQIMDADNRPMFDSGSARLKPYFEDILLAMADTIKSVPN 194
Query: 82 DFLIEGHADELGSR----NSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVY 136
I GH D + L RA A VA S++ +V Y
Sbjct: 195 KISISGHTDATPFVGNGGFGNWELSANRANAARRALVAGTYPDSQVARVVGYASSA-LYD 253
Query: 137 GHDEDAYAKNRRAIVFLKGCRA 158
+ NRR + + +A
Sbjct: 254 HENPTN-PVNRRIDIVVLTKKA 274
>gi|289623746|ref|ZP_06456700.1| flagellar motor protein MotB [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|330865884|gb|EGH00593.1| flagellar motor protein MotB [Pseudomonas syringae pv. aesculi str.
0893_23]
Length = 344
Score = 40.6 bits (93), Expect = 0.066, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 45/142 (31%), Gaps = 10/142 (7%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ ++ + Q+ + D FD+ S ++P +L + ++
Sbjct: 135 NPQLQKFKDQILFEITQDGLRIQIMDADNRPMFDSGSARLKPYFEDILLAMADTIKSVPN 194
Query: 82 DFLIEGHADELGSR----NSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVY 136
I GH D + L RA A VA S++ +V Y
Sbjct: 195 KISISGHTDATPFVGNGGFGNWELSANRANAARRALVAGTYPDSQVARVVGYASSA-LYD 253
Query: 137 GHDEDAYAKNRRAIVFLKGCRA 158
+ NRR + + +A
Sbjct: 254 HENPTN-PVNRRIDIVVLTKKA 274
>gi|283133065|dbj|BAI63831.1| flagellar motor protein MotB [Pseudomonas syringae pv. tabaci]
Length = 341
Score = 40.6 bits (93), Expect = 0.067, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 45/142 (31%), Gaps = 10/142 (7%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ ++ + Q+ + D FD+ S ++P +L + ++
Sbjct: 135 NPQLQKFKDQILFEITQDGLRIQIMDADNRPMFDSGSARLKPYFEDILLAMADTIKSVPN 194
Query: 82 DFLIEGHADELGSR----NSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVY 136
I GH D + L RA A VA S++ +V Y
Sbjct: 195 KISISGHTDATPFVGNGGFGNWELSANRANAARRALVAGTYPDSQVARVVGYASSA-LYD 253
Query: 137 GHDEDAYAKNRRAIVFLKGCRA 158
+ NRR + + +A
Sbjct: 254 HENPTN-PVNRRIDIVVLTKKA 274
>gi|94970509|ref|YP_592557.1| OmpA/MotB family outer membrane protein [Candidatus Koribacter
versatilis Ellin345]
gi|94552559|gb|ABF42483.1| outer membrane protein, OmpA/MotB family [Candidatus Koribacter
versatilis Ellin345]
Length = 264
Score = 40.6 bits (93), Expect = 0.067, Method: Composition-based stats.
Identities = 24/107 (22%), Positives = 39/107 (36%), Gaps = 7/107 (6%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR----NSSIALGLRRAYA 108
FFD+ S + ++L L L+ IEGH D S+ L RA A
Sbjct: 132 FFDSGSARPNDSGKELLEMLAHELQNLPNTISIEGHTDSKPFVGNGSYSNWELSADRANA 191
Query: 109 VFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
G+ +++ V + + ED NRR + ++
Sbjct: 192 ARRLMQDSGVRGNQVSQVRGFADQNLRKKDAPED--PSNRRITILVQ 236
>gi|58616636|ref|YP_195845.1| outer membrane protein [Achromobacter xylosoxidans A8]
gi|190571962|ref|YP_001967686.1| hypothetical protein pCNB_p42 [Comamonas testosteroni CNB-1]
gi|311109703|ref|YP_003982555.1| outer membrane protein 2 [Achromobacter xylosoxidans A8]
gi|58416234|emb|CAI47829.1| outer membrane protein [Achromobacter xylosoxidans]
gi|119943700|gb|ABM06222.1| hypothetical protein [Comamonas testosteroni CNB-1]
gi|310764392|gb|ADP19840.1| outer membrane protein 2 [Achromobacter xylosoxidans A8]
Length = 147
Score = 40.6 bits (93), Expect = 0.068, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 28/71 (39%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
+ G L + AL LRRA + Y +ARG+S ++ V +
Sbjct: 71 IYVSGRTSTLRPSAADEALALRRALSARQYLIARGVSPLKIMVNFASASDFVADNSTPEG 130
Query: 143 YAKNRRAIVFL 153
+N+R + +
Sbjct: 131 RHQNQRVDIEV 141
>gi|156976178|ref|YP_001447084.1| flagellar motor protein [Vibrio harveyi ATCC BAA-1116]
gi|156527772|gb|ABU72857.1| hypothetical protein VIBHAR_04949 [Vibrio harveyi ATCC BAA-1116]
Length = 330
Score = 40.6 bits (93), Expect = 0.068, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 50/153 (32%), Gaps = 11/153 (7%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSN 71
+ ++ + + S +N + + + D F + P +L
Sbjct: 129 LALLAKVIDEVVGQISAQGNVNVTITPQGLRIVLQDDYKQHMFSRGGAELTPFFEDLLLA 188
Query: 72 LGSWLEKHDCDFLIEGHADELGS-----RNSSIALGLRRAYAVFNYFVARGISASR-MKV 125
L E+ I GH D R S+ AL RA N V G+ R M+V
Sbjct: 189 LAPVFERISNPLFISGHTDSTPFKKRFGRQSNWALSASRADVARNTLVEGGMPDDRVMQV 248
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
T + ++NRR +F+ A
Sbjct: 249 TGMSDRALLNPEEPDS--SENRRIELFILTTPA 279
>gi|296282270|ref|ZP_06860268.1| OmpA/MotB domain-containing protein [Citromicrobium bathyomarinum
JL354]
Length = 273
Score = 40.6 bits (93), Expect = 0.069, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 49/133 (36%), Gaps = 7/133 (5%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI 85
K+ S +++ + D F+ + + ++L+ + +E + ++
Sbjct: 141 AKLMSQIKMVDTTEGVRIDLVDDADFSMFNLGTTVLTRDAAELLAAIAQAIEPEKREIIV 200
Query: 86 EGHADELGSRNS----SIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDE 140
GH D L +N + +L RA A + GI + + V D+
Sbjct: 201 RGHTDSLKWKNPGRINNWSLSAGRAEATRQTLMNEGIPDDSFRRIEGVADTELLV--KDD 258
Query: 141 DAYAKNRRAIVFL 153
A +NRR + L
Sbjct: 259 PADPRNRRISIVL 271
>gi|288942642|ref|YP_003444882.1| OmpA/MotB domain-containing protein [Allochromatium vinosum DSM
180]
gi|288898014|gb|ADC63850.1| OmpA/MotB domain protein [Allochromatium vinosum DSM 180]
Length = 305
Score = 40.6 bits (93), Expect = 0.069, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 41/114 (35%), Gaps = 6/114 (5%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS---RNSSIALGLRRA 106
FD S ++ +L LG + + + GH D S+ L RA
Sbjct: 169 HRSMFDLGSAKLKDYTSDILRELGGLINQVPNRISLTGHTDARPLGGLSYSNWELSTERA 228
Query: 107 YAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
A VA G+ A ++ +V + +P + NRR + + A+
Sbjct: 229 NAARRALVAGGMRADKVGRVVGFASTVPFDT--SDPNNPINRRISLIVMTREAD 280
>gi|68499987|gb|AAY97930.1| putative outer membrane protein [Plasmid pMCBF1]
gi|133711739|gb|ABO36559.1| putative outer membrane protein [uncultured bacterium pMCBF6]
Length = 224
Score = 40.6 bits (93), Expect = 0.070, Method: Composition-based stats.
Identities = 23/153 (15%), Positives = 50/153 (32%), Gaps = 14/153 (9%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ + + + +++ + S S+ S DS S +
Sbjct: 80 MRKTLALTLF--LASLTLPAVSAAQPHYQSAGYGHPVSTT---LHVSFPDS------SST 128
Query: 61 IRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA 120
+P+ QV + +I G L +L L RA + ++ +ARG+S
Sbjct: 129 FQPSPGQV---AALGDVRDAAMVIISGRTSTLRPSARDESLALARAASARSWLIARGVSP 185
Query: 121 SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ + + N+R + +
Sbjct: 186 LKIMINYVSAADFIADNSTPEGRYMNQRVDIEV 218
>gi|57168474|ref|ZP_00367608.1| chemotaxis motB protein, putative [Campylobacter coli RM2228]
gi|305432893|ref|ZP_07402051.1| chemotaxis motB protein [Campylobacter coli JV20]
gi|57020282|gb|EAL56956.1| chemotaxis motB protein, putative [Campylobacter coli RM2228]
gi|304444047|gb|EFM36702.1| chemotaxis motB protein [Campylobacter coli JV20]
Length = 243
Score = 40.6 bits (93), Expect = 0.070, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 41/119 (34%), Gaps = 6/119 (5%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSI-RPADIQVLSNLGS--WLEKHDCDFLIEGHADELGSR 95
+ Q ++ V F+ S I L + + I G+ D S
Sbjct: 108 QSENQEILNLPSKVEFERGSAQIVSADIQDYLKRIAQLISYLPPQIEIEIRGYTDNSDSA 167
Query: 96 NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
S LG RA V Y + G+S + + SYG P + A N R ++ K
Sbjct: 168 LRSYDLGYTRAENVLKYLIEGGVSTKNINLKSYGLNSPI--NGNPQALENN-RVQIYFK 223
>gi|157959885|ref|YP_001499919.1| OmpA/MotB domain-containing protein [Shewanella pealeana ATCC
700345]
gi|157844885|gb|ABV85384.1| OmpA/MotB domain protein [Shewanella pealeana ATCC 700345]
Length = 336
Score = 40.6 bits (93), Expect = 0.071, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 49/138 (35%), Gaps = 6/138 (4%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL 84
D +S+ + + F S ++P +L LG L K +
Sbjct: 157 DVSMSANVKLQVVPQGVRILMHDNINKFMFTRGSSEMKPYFEDLLMALGPVLSKVENKMS 216
Query: 85 IEGHADELGSR---NSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDE 140
I GH D ++ L +RA G+ ++ ++VT + P + HD
Sbjct: 217 ISGHTDSTPFIGKTFTNWELSSKRALLARRVLGYAGVKNNQVLQVTGMADQAPYIS-HDP 275
Query: 141 DAYAKNRRAIVFLKGCRA 158
A A NRR + + A
Sbjct: 276 AA-AANRRIEMIIMTTDA 292
>gi|298369755|ref|ZP_06981072.1| cytochrome c oxidase, subunit II [Neisseria sp. oral taxon 014 str.
F0314]
gi|298282312|gb|EFI23800.1| cytochrome c oxidase, subunit II [Neisseria sp. oral taxon 014 str.
F0314]
Length = 183
Score = 40.6 bits (93), Expect = 0.071, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 51/133 (38%), Gaps = 6/133 (4%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD 82
++ + + + FF T + QV+++L ++
Sbjct: 57 VAASEAIASPVSAPAADTSQVVMDGGVAKFFFATGKNDVAEGAEQVVADLIEAGKE-GKK 115
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
+I G AD G+ S+ L +RA AV +F A G+ A +++ P E
Sbjct: 116 LVISGFADSTGNAASNQELSKKRAQAVQAFFEAHGVKAGNIELR-----KPKSTTGAEGN 170
Query: 143 YAKNRRAIVFLKG 155
A+ RR V ++G
Sbjct: 171 DAEGRRVEVKVEG 183
>gi|45442813|ref|NP_994352.1| hypothetical protein YP_3056 [Yersinia pestis biovar Microtus str.
91001]
gi|108809034|ref|YP_652950.1| hypothetical protein YPA_3043 [Yersinia pestis Antiqua]
gi|150260228|ref|ZP_01916956.1| lateral flagellar proton motor protein B [Yersinia pestis
CA88-4125]
gi|162420691|ref|YP_001604823.1| hypothetical protein YpAngola_A0200 [Yersinia pestis Angola]
gi|165924864|ref|ZP_02220696.1| flagellar motor protein B [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165939072|ref|ZP_02227624.1| flagellar motor protein B [Yersinia pestis biovar Orientalis str.
IP275]
gi|166008977|ref|ZP_02229875.1| flagellar motor protein B [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166212177|ref|ZP_02238212.1| flagellar motor protein B [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167398344|ref|ZP_02303868.1| flagellar motor protein B [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167419079|ref|ZP_02310832.1| flagellar motor protein B [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167466315|ref|ZP_02331019.1| flagellar motor protein B [Yersinia pestis FV-1]
gi|170022980|ref|YP_001719485.1| hypothetical protein YPK_0731 [Yersinia pseudotuberculosis YPIII]
gi|218927933|ref|YP_002345808.1| hypothetical protein YPO0747 [Yersinia pestis CO92]
gi|229837433|ref|ZP_04457596.1| Flagellar motor rotation protein motB [Yersinia pestis Pestoides A]
gi|229840644|ref|ZP_04460803.1| Flagellar motor rotation protein motB [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229842804|ref|ZP_04462956.1| Flagellar motor rotation protein motB [Yersinia pestis biovar
Orientalis str. India 195]
gi|294502809|ref|YP_003566871.1| flagellar motor protein [Yersinia pestis Z176003]
gi|45437679|gb|AAS63229.1| chemotaxis MotB protein [Yersinia pestis biovar Microtus str.
91001]
gi|108780947|gb|ABG15005.1| putative chemotaxis membrane protein [Yersinia pestis Antiqua]
gi|115346544|emb|CAL19421.1| putative chemotaxis membrane protein [Yersinia pestis CO92]
gi|149289636|gb|EDM39713.1| lateral flagellar proton motor protein B [Yersinia pestis
CA88-4125]
gi|162353506|gb|ABX87454.1| flagellar motor protein B [Yersinia pestis Angola]
gi|165913028|gb|EDR31653.1| flagellar motor protein B [Yersinia pestis biovar Orientalis str.
IP275]
gi|165923064|gb|EDR40215.1| flagellar motor protein B [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165992316|gb|EDR44617.1| flagellar motor protein B [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166206923|gb|EDR51403.1| flagellar motor protein B [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166963073|gb|EDR59094.1| flagellar motor protein B [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167050848|gb|EDR62256.1| flagellar motor protein B [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|169749514|gb|ACA67032.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis YPIII]
gi|229690071|gb|EEO82128.1| Flagellar motor rotation protein motB [Yersinia pestis biovar
Orientalis str. India 195]
gi|229697010|gb|EEO87057.1| Flagellar motor rotation protein motB [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229705556|gb|EEO91566.1| Flagellar motor rotation protein motB [Yersinia pestis Pestoides A]
gi|262360841|gb|ACY57562.1| flagellar motor protein [Yersinia pestis D106004]
gi|262364786|gb|ACY61343.1| flagellar motor protein [Yersinia pestis D182038]
gi|294353268|gb|ADE63609.1| flagellar motor protein [Yersinia pestis Z176003]
Length = 303
Score = 40.6 bits (93), Expect = 0.072, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 49/141 (34%), Gaps = 8/141 (5%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD 82
T + + L + + + D F SS + P ++L L + D
Sbjct: 140 TSAYNAQSNLQMEVVPQGLRILIQDDQQRDMFQRSSAVLTPFFSRLLGELAPAFNEMDNK 199
Query: 83 FLIEGHADELGSR----NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+I GH D R ++ L RA V G+ R+ + + +
Sbjct: 200 IIITGHTDASRYRDQLLYNNWNLSGERALMAHKALVNGGLDEGRVLQINAMADQMLLDPT 259
Query: 139 DEDAYAKNRRAIVFLKGCRAN 159
D A AKNRR + + A+
Sbjct: 260 DPLA-AKNRRIEIMVLTKTAS 279
>gi|153948417|ref|YP_001399654.1| hypothetical protein YpsIP31758_0662 [Yersinia pseudotuberculosis
IP 31758]
gi|152959912|gb|ABS47373.1| flagellar motor protein B [Yersinia pseudotuberculosis IP 31758]
Length = 303
Score = 40.6 bits (93), Expect = 0.073, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 51/141 (36%), Gaps = 8/141 (5%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSNLGSWLEKHDCD 82
T + + L + + + D + F SS + P ++L L + D
Sbjct: 140 TSAYNAQSNLQMEVVPQGLRILIQDDLQRDMFQRSSAVLTPFFSRLLGELAPAFNEMDNK 199
Query: 83 FLIEGHADELGSR----NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+I GH D R ++ L RA V+ G+ R+ + + +
Sbjct: 200 IIITGHTDASRYRDQLLYNNWNLSGERALMAHKALVSGGLDKGRVLQINAMADQMLLDPT 259
Query: 139 DEDAYAKNRRAIVFLKGCRAN 159
D A AKNRR + + A+
Sbjct: 260 DPLA-AKNRRIEIMVLTKTAS 279
>gi|149191181|ref|ZP_01869439.1| chemotaxis LafU protein [Vibrio shilonii AK1]
gi|148835019|gb|EDL51998.1| chemotaxis LafU protein [Vibrio shilonii AK1]
Length = 322
Score = 40.6 bits (93), Expect = 0.074, Method: Composition-based stats.
Identities = 25/105 (23%), Positives = 41/105 (39%), Gaps = 6/105 (5%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG---SRNSSIALGLRRAYAV 109
F + P +L NL LEK + +I GH D SR ++ L RA +
Sbjct: 157 MFFRGGAKVTPFYQDLLLNLAGLLEKIENKMIITGHTDASRYKGSRMTNWELSSNRANSA 216
Query: 110 FNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
Y G+ + +VT P + + + NRR +++
Sbjct: 217 RYYLDKGGLQERHIFQVTGMSDTAPIDFNNAKSG--INRRIELYI 259
>gi|311695399|gb|ADP98272.1| OmpA/MotB domain protein [marine bacterium HP15]
Length = 246
Score = 40.6 bits (93), Expect = 0.076, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 43/143 (30%), Gaps = 10/143 (6%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDS---VFFDTSSYSIRPADIQVLSNLGSWLEKH 79
D + L E + D FD+ ++ +L L L
Sbjct: 53 KQDETLQEFKDQLLIDITDEGLRIQIVDRSGRPMFDSGRAELKYYSQDILFELAKTLGSV 112
Query: 80 DCDFLIEGHADELGSR----NSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPS 134
+ I GH D ++ L RA VA G+ ++ +V +
Sbjct: 113 NNKLSITGHTDSTPFSGRPGYTNWELSADRANTARRALVAGGVRQQQIARVVGLSDSV-L 171
Query: 135 VYGHDEDAYAKNRRAIVFLKGCR 157
D +A NRR + + +
Sbjct: 172 FDKEDPNA-PVNRRISIIVLNKK 193
>gi|149374319|ref|ZP_01892093.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Marinobacter algicola DG893]
gi|149361022|gb|EDM49472.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Marinobacter algicola DG893]
Length = 310
Score = 40.6 bits (93), Expect = 0.076, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 9/113 (7%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNSSIALGLRRAYA 108
+ F + S S+ AD + L N+ +++ ++GH D GSR + AL RA A
Sbjct: 189 RISFASGSTSLSDADRRFLDNIVMYIQADSTVERVFVDGHTDSSGSRIDNRALSEERANA 248
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL--KGCRAN 159
V +Y + +GI A + ++ + P A NRR + L +G R +
Sbjct: 249 VADYLIGQGIEADLVTTRAHADQYPVSRRP-----ADNRRTTIRLQREGERPD 296
>gi|108762481|ref|YP_632884.1| OmpA family protein [Myxococcus xanthus DK 1622]
gi|108466361|gb|ABF91546.1| OmpA family protein [Myxococcus xanthus DK 1622]
Length = 386
Score = 40.6 bits (93), Expect = 0.076, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Query: 68 VLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
++ L + + GH D +G+ ++ L +RRA ++ YF +G+ +
Sbjct: 283 IVDALTKYGRFASLRLYVMGHTDTVGAAAENLDLSVRRAKSLAAYFRKKGLRVP-VYYEG 341
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFL 153
G+E P+V DE A A NRRA +
Sbjct: 342 LGEEAPAVATPDETAEAGNRRAEYII 367
>gi|332707017|ref|ZP_08427077.1| peptidoglycan-associated lipoprotein [Lyngbya majuscula 3L]
gi|332354282|gb|EGJ33762.1| peptidoglycan-associated lipoprotein [Lyngbya majuscula 3L]
Length = 802
Score = 40.6 bits (93), Expect = 0.077, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 40/109 (36%), Gaps = 4/109 (3%)
Query: 45 SSSVGDSVFFDTSSYSIRPA--DIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALG 102
V ++FD S ++P ++ S I G+AD G + L
Sbjct: 688 GLDVTSRIYFDLGSAQLKPEDIGTKIRSIKEFMERYPQKHLRIIGYADPRGQLTENQGLA 747
Query: 103 LRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+RA V + V +GI R++V GK P V NR +
Sbjct: 748 QQRAQMVKDVLVQQGIDPKRLQVRGVGKRPPDVDASQPLW--LNRCVVF 794
>gi|323529505|ref|YP_004231657.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1001]
gi|323386507|gb|ADX58597.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1001]
Length = 328
Score = 40.6 bits (93), Expect = 0.077, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 43/120 (35%), Gaps = 8/120 (6%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSSI 99
+ F + S ++ + +L+ +G+ L D I GH D + S+
Sbjct: 171 IVDSQNRPMFASGSPRLQTYAVAILTQIGAALNDVDNRISIAGHTDAVPYTGGPVGYSNW 230
Query: 100 ALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
L RA A V+ G+ ++ +V +P + NRR + + A
Sbjct: 231 ELSSERANAARRALVSGGMHGEKLLQVRGLADVLPL--NSNVVDEPTNRRISILVMNKAA 288
>gi|118591643|ref|ZP_01549039.1| hypothetical protein SIAM614_21907 [Stappia aggregata IAM 12614]
gi|118435636|gb|EAV42281.1| hypothetical protein SIAM614_21907 [Stappia aggregata IAM 12614]
Length = 316
Score = 40.6 bits (93), Expect = 0.080, Method: Composition-based stats.
Identities = 25/107 (23%), Positives = 43/107 (40%), Gaps = 7/107 (6%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVF 110
+ F + A ++ LEK D + GH D +GS ++ L L+RA AV
Sbjct: 209 IQFVYDQDVMTKAGKTSFEDVQEALEKQGAPDIQVIGHTDPVGSDAYNLQLSLKRAEAVR 268
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGH----DEDAY-AKNRRAIVF 152
+ +A G + ++V G+ P + E+ +RR
Sbjct: 269 SALLAAGY-SGSIEVLGMGESQPFQFDDPSLYTEEVRNQAHRRVEFV 314
>gi|330951464|gb|EGH51724.1| flagellar motor protein MotB [Pseudomonas syringae Cit 7]
Length = 351
Score = 40.6 bits (93), Expect = 0.082, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 45/142 (31%), Gaps = 10/142 (7%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ ++ + Q+ + D FD+ S ++P +L L ++
Sbjct: 135 NPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDSGSARLKPYFEDILLALADTIKSVPN 194
Query: 82 DFLIEGHADELGSR----NSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVY 136
I GH D + L RA A VA S++ +V Y
Sbjct: 195 KISISGHTDATPFVGSGGFGNWELSANRANAARRALVAGTYPDSQVARVVGYASSA-LYD 253
Query: 137 GHDEDAYAKNRRAIVFLKGCRA 158
+ NRR + + +A
Sbjct: 254 HQNPTN-PVNRRIDIVVLTKKA 274
>gi|315179650|gb|ADT86564.1| lateral flagellar motor protein B [Vibrio furnissii NCTC 11218]
Length = 330
Score = 40.6 bits (93), Expect = 0.082, Method: Composition-based stats.
Identities = 28/153 (18%), Positives = 52/153 (33%), Gaps = 11/153 (7%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSN 71
+ ++ + + S ++ S + + D F + P +L
Sbjct: 129 LTILAKVIEAMMRQISAQGNVHVSVTPQGLRIVLQDDYKQHMFSRGGTELTPFFEDLLLA 188
Query: 72 LGSWLEKHDCDFLIEGHADE-----LGSRNSSIALGLRRAYAVFNYFVARGISASR-MKV 125
L ++ + +I GH D S ++ L RA VA G+ R ++V
Sbjct: 189 LAPVFQRVENPLIISGHTDSTAFKQRFSHRTNWELSANRANIARQTLVAGGMPEQRVLQV 248
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
T DE ++NRR +F+ A
Sbjct: 249 TGMSDRALL--NPDEPDGSENRRIELFVLTTPA 279
>gi|289577893|ref|YP_003476520.1| OmpA/MotB domain protein [Thermoanaerobacter italicus Ab9]
gi|289527606|gb|ADD01958.1| OmpA/MotB domain protein [Thermoanaerobacter italicus Ab9]
Length = 230
Score = 40.6 bits (93), Expect = 0.084, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 43/129 (33%), Gaps = 20/129 (15%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL---------EKHDCDFLIEGHADELGSR 95
+ S + VFFD + ++ + L+ +K+ ++EGH D+ G
Sbjct: 83 AISFSEGVFFDKDKFELKEEGKRYLNEFIPRYLSILMDPRFKKYISQIIVEGHTDDTGDY 142
Query: 96 NSSIALGLRRAYAVFNYF----------VARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
++ L +RA+ V Y + S + + + K
Sbjct: 143 MYNLELSQKRAFEVVRYILQSNIKGIDSKTKADLMSYITANGRSYSQLIIENG-KVNRQK 201
Query: 146 NRRAIVFLK 154
+RR +
Sbjct: 202 SRRVEFKFR 210
>gi|300787647|ref|YP_003767938.1| OmpA-OmpF porin, OOP family [Amycolatopsis mediterranei U32]
gi|299797161|gb|ADJ47536.1| OmpA-OmpF porin, OOP family [Amycolatopsis mediterranei U32]
Length = 410
Score = 40.2 bits (92), Expect = 0.085, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 45/122 (36%), Gaps = 8/122 (6%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLR 104
S S+ FD +S + PA VL + L+ I GH G L ++
Sbjct: 288 SVSLSAQALFDPNSPVLAPAAEAVLRPYVTILQGPGAHATITGHTATWGPIPGRDLLSVQ 347
Query: 105 RAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAY------AKNRRAIV-FLKGC 156
RA AV NYF+ + + A + G V D +NRR ++ +
Sbjct: 348 RAEAVRNYFIEQHVPAEALAPARGVGSSEQVVNDIDPAGNLIEQAAQRNRRIVLDIVTPT 407
Query: 157 RA 158
+
Sbjct: 408 KG 409
>gi|91201947|emb|CAJ75007.1| similar to H+-driven flagellar motor component MotB [Candidatus
Kuenenia stuttgartiensis]
Length = 230
Score = 40.2 bits (92), Expect = 0.085, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 47/141 (33%), Gaps = 7/141 (4%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
D++D + + E ++F ++ + L+NL +
Sbjct: 92 DDMDDIPAQTGDKEVDKMENEADHIPAAAVIYFKEHGATLSLEGMHSLNNLVNLTADRPV 151
Query: 82 DFLIEGHAD----ELGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVY 136
++EGH +S L + RA AV +Y +G + R+ +G V
Sbjct: 152 LLMVEGHTRVAFKPSKDYETSWKLSVDRARAVADYLHEKGNISHKRLITVGHGNNNSFV- 210
Query: 137 GHDEDAYAKNRRAIVFLKGCR 157
N R + +K R
Sbjct: 211 -KSPGGDRFNDRVSIIIKKLR 230
>gi|332527142|ref|ZP_08403219.1| OmpA/MotB domain-containing protein [Rubrivivax benzoatilyticus
JA2]
gi|332111570|gb|EGJ11552.1| OmpA/MotB domain-containing protein [Rubrivivax benzoatilyticus
JA2]
Length = 322
Score = 40.2 bits (92), Expect = 0.086, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 42/121 (34%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F + S ++P ++L +GS L + +EGH D + S+
Sbjct: 165 QIVDEQNRPMFASGSAVVQPYMRELLQEIGSVLAEVPNRLTLEGHTDAMAYAGGERGYSN 224
Query: 99 IALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A G+ RM +V P D A NRR + +
Sbjct: 225 WELSSDRANASRRVLAEGGLPEDRMLRVQGLASSQPF-DRQDPLA-PTNRRISIIVMNRE 282
Query: 158 A 158
A
Sbjct: 283 A 283
>gi|260767946|ref|ZP_05876880.1| Flagellar motor rotation protein MotB [Vibrio furnissii CIP 102972]
gi|260615976|gb|EEX41161.1| Flagellar motor rotation protein MotB [Vibrio furnissii CIP 102972]
Length = 330
Score = 40.2 bits (92), Expect = 0.086, Method: Composition-based stats.
Identities = 28/153 (18%), Positives = 52/153 (33%), Gaps = 11/153 (7%)
Query: 15 MMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSN 71
+ ++ + + S ++ S + + D F + P +L
Sbjct: 129 LTILAKVIEAMMRQISAQGNVHVSVTPQGLRIVLQDDYKQHMFSRGGTELTPFFEDLLLA 188
Query: 72 LGSWLEKHDCDFLIEGHADE-----LGSRNSSIALGLRRAYAVFNYFVARGISASR-MKV 125
L ++ + +I GH D S ++ L RA VA G+ R ++V
Sbjct: 189 LAPVFQRVENPLIISGHTDSTAFKRRFSHRTNWELSANRANIARQTLVAGGMPEQRVLQV 248
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
T DE ++NRR +F+ A
Sbjct: 249 TGMSDRALL--NPDEPDGSENRRIELFVLTTPA 279
>gi|289661540|ref|ZP_06483121.1| hypothetical protein XcampvN_00160 [Xanthomonas campestris pv.
vasculorum NCPPB702]
Length = 145
Score = 40.2 bits (92), Expect = 0.087, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 34/122 (27%), Gaps = 10/122 (8%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH------DCDFLIEGHADE 91
++Q Q + D + S R Q L + G D
Sbjct: 21 QAVQRQQAPRAADRPLYSVVSVQFRWNSAQFLPTPAQVAHLRGLIAAGVAHVQVRGRTDN 80
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMK--VTSYGKEMPSVYGHDEDAYAKNRRA 149
+ + RA A ++ + G+ + + S G D A NRR
Sbjct: 81 PNPSSGDERIARGRAEAAKDWLIGEGVPSGIIDLNFVSAGDYQ--SNNRLSDGRALNRRV 138
Query: 150 IV 151
+
Sbjct: 139 DI 140
>gi|227820870|ref|YP_002824840.1| flagellar motor protein MotB [Sinorhizobium fredii NGR234]
gi|227339869|gb|ACP24087.1| chemotaxis protein motility protein B [Sinorhizobium fredii NGR234]
Length = 392
Score = 40.2 bits (92), Expect = 0.087, Method: Composition-based stats.
Identities = 21/113 (18%), Positives = 40/113 (35%), Gaps = 6/113 (5%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR---NSSIALGLRRA 106
D+ F S + + +G+ L + I GH D + + L RA
Sbjct: 282 DAPMFAVGSAVPAKDLVLAMEKIGTLLAERQGAVAIRGHTDGRPFKDGTYDNWRLSAARA 341
Query: 107 YAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
+ + V G+ R+ +++ + V A NRR + L+ +
Sbjct: 342 QSAYYMLVRGGLKEQRVNQISGFADRRLQVPNDPYA--AANRRIEILLQSGQG 392
>gi|320321894|gb|EFW77990.1| flagellar motor protein MotB [Pseudomonas syringae pv. glycinea
str. B076]
gi|320331001|gb|EFW86975.1| flagellar motor protein MotB [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330872240|gb|EGH06389.1| flagellar motor protein MotB [Pseudomonas syringae pv. glycinea
str. race 4]
Length = 341
Score = 40.2 bits (92), Expect = 0.088, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 45/142 (31%), Gaps = 10/142 (7%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ ++ + Q+ + D FD+ S ++P +L + ++
Sbjct: 135 NPQLQKFKDQILFEITQDGLRIQIMDADNRPMFDSGSARLKPYFEDILLAMADTIKSVPN 194
Query: 82 DFLIEGHADELGSR----NSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVY 136
I GH D + L RA A VA S++ +V Y
Sbjct: 195 KISISGHTDATPFVGNGGFGNWELSANRANAARRALVAGTYPDSQVARVVGYASSA-LYD 253
Query: 137 GHDEDAYAKNRRAIVFLKGCRA 158
+ NRR + + +A
Sbjct: 254 YENPTN-PVNRRIDIVVLTKKA 274
>gi|119470188|ref|ZP_01612954.1| Outer membrane protein [Alteromonadales bacterium TW-7]
gi|119446609|gb|EAW27883.1| Outer membrane protein [Alteromonadales bacterium TW-7]
Length = 284
Score = 40.2 bits (92), Expect = 0.089, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 50/142 (35%), Gaps = 2/142 (1%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK- 78
+ L + S+++Q + + F ++ I P L+ +++
Sbjct: 121 TVQQLTQCAVVKEDKPALFSVKKQITDLLNSDNQFAFKAFEITPKYAVRLAQAADLVKEL 180
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG- 137
L+ GH D +G S+ L L+RA V ++ V G+ + + G P
Sbjct: 181 ESISILLVGHTDSMGEMASNYELALKRAETVKHWLVVYGVPVQSITTLTQGSLKPYSDEP 240
Query: 138 HDEDAYAKNRRAIVFLKGCRAN 159
+ +RR + N
Sbjct: 241 QTDSVRHSDRRVEAIVLDANTN 262
>gi|71908555|ref|YP_286142.1| hypothetical protein Daro_2942 [Dechloromonas aromatica RCB]
gi|71848176|gb|AAZ47672.1| hypothetical protein Daro_2942 [Dechloromonas aromatica RCB]
Length = 425
Score = 40.2 bits (92), Expect = 0.089, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 30/100 (30%), Gaps = 2/100 (2%)
Query: 59 YSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI 118
+ L + + GH G + L L RA V
Sbjct: 326 AKLSGPYPLWLKTIAQRSGGSANCLEVTGHTSPTGPEPLNERLSLLRAEYVKERLAGMSP 385
Query: 119 S-ASRMKVTSYGKEMPSV-YGHDEDAYAKNRRAIVFLKGC 156
S A RM G V G D+ + A +RR + GC
Sbjct: 386 SLAKRMIANGVGSRQTLVGTGRDDASDALDRRVEFKVIGC 425
>gi|29346911|ref|NP_810414.1| major outer membrane protein OmpA [Bacteroides thetaiotaomicron
VPI-5482]
gi|29338809|gb|AAO76608.1| major outer membrane protein OmpA [Bacteroides thetaiotaomicron
VPI-5482]
Length = 363
Score = 40.2 bits (92), Expect = 0.089, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 51/133 (38%), Gaps = 8/133 (6%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDC 81
+ + V +E + ++FF +S I+ +++L + +
Sbjct: 235 VVTEQPKPAPVVEQPQPKKEVVIEPLKQNIFFAINSAKIQDDQQAKIASLVEYLEKNATA 294
Query: 82 DFLIEGHADE-LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ G+AD+ G+ + L +RA V A+GI+A R+ V G +
Sbjct: 295 KVSVTGYADKGTGNARINSKLSEKRANNVVEALKAKGIAADRITVAYKGDT--VQPYNTP 352
Query: 141 DAYAKNRRAIVFL 153
+ +N R + +
Sbjct: 353 E---EN-RVSICI 361
>gi|302340145|ref|YP_003805351.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293]
gi|301637330|gb|ADK82757.1| OmpA/MotB domain protein [Spirochaeta smaragdinae DSM 11293]
Length = 343
Score = 40.2 bits (92), Expect = 0.092, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 46/132 (34%), Gaps = 5/132 (3%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--FL 84
KI+ + ++ S ++F + + L G L + +
Sbjct: 211 KIAEQEPTAPVTAS-AFRSVEKRAVIYFHPNDSELTAEAQTQLRVFGRQLREWNSIDAVS 269
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
IEGH LG+ I L RA + GI A + + + E P+ D D
Sbjct: 270 IEGHCALLGTEKGRIELSRERAENSAAFLETIGIPAQGVSLQWFAGERPA--TRDPDKQE 327
Query: 145 KNRRAIVFLKGC 156
NRR + KG
Sbjct: 328 LNRRVEISAKGK 339
>gi|307726280|ref|YP_003909493.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003]
gi|307586805|gb|ADN60202.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003]
Length = 330
Score = 40.2 bits (92), Expect = 0.093, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 43/120 (35%), Gaps = 8/120 (6%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSSI 99
+ F + S ++ + +L+ +G+ L + I GH D + S+
Sbjct: 173 IVDSQNRPMFASGSPRLQTYAVAILTQIGAALNDVENRISIAGHTDAVPYTGGPVGYSNW 232
Query: 100 ALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
L RA A VA G+ ++ +V +P + NRR + + A
Sbjct: 233 ELSSERANAARRALVAGGMHGEKLLQVRGLADVLPL--NSNVVDEPTNRRISILVMNKAA 290
>gi|92114147|ref|YP_574075.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043]
gi|91797237|gb|ABE59376.1| OmpA/MotB [Chromohalobacter salexigens DSM 3043]
Length = 330
Score = 40.2 bits (92), Expect = 0.093, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 51/143 (35%), Gaps = 11/143 (7%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
D + + L + E + D F+ S + P +L L L
Sbjct: 127 DPNLRQMSSQLRTDFIPEGLRIQLVDTDKRPMFELGSARLAPYMRDLLQALAPELNDVPN 186
Query: 82 DFLIEGHADELGS-----RNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSV 135
+ GH D+L S+ L RA A VA G+ +S++ +V+ G
Sbjct: 187 AISLTGHTDDLRYAGGEKGYSNWELSADRANASRRALVAAGLDSSKLLRVSGMGAR--VN 244
Query: 136 YGHDEDAYAKNRRAIVFLKGCRA 158
+ + A NRR + + RA
Sbjct: 245 LEGTQPSDAVNRRISIVVLSERA 267
>gi|213967914|ref|ZP_03396060.1| chemotaxis motB protein [Pseudomonas syringae pv. tomato T1]
gi|213927257|gb|EEB60806.1| chemotaxis motB protein [Pseudomonas syringae pv. tomato T1]
Length = 341
Score = 40.2 bits (92), Expect = 0.094, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 45/142 (31%), Gaps = 10/142 (7%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ ++ + Q+ + D FD+ S ++P +L L +
Sbjct: 135 NPQLQKFKDQILFEITQDGLRIQIMDADNRPMFDSGSARLKPYFEGILLALADTIRSVPN 194
Query: 82 DFLIEGHADELG----SRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVY 136
I GH D + + L RA A VA S++ +V Y
Sbjct: 195 KISISGHTDATPFVGNNGFGNWELSANRANAARRALVAGTYPDSQVARVVGYASSA-LYD 253
Query: 137 GHDEDAYAKNRRAIVFLKGCRA 158
+ NRR + + +A
Sbjct: 254 RENPTN-PVNRRIDIVVLTKKA 274
>gi|295110189|emb|CBL24142.1| Outer membrane protein and related peptidoglycan-associated
(lipo)proteins [Ruminococcus obeum A2-162]
Length = 331
Score = 40.2 bits (92), Expect = 0.096, Method: Composition-based stats.
Identities = 21/141 (14%), Positives = 46/141 (32%), Gaps = 19/141 (13%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS---------WLEKHDCDF 83
+N + + ++ SV FD + + Q L + + + +
Sbjct: 156 NNINVDIDAQTGALTLEASVMFDYDQAELTDSGKQALEQILPIYCKVLLQDDYKDYLAEI 215
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYFV----------ARGISASRMKVTSYGKEMP 133
+I+G+ D G + ++ L +R+ AV Y + + V + P
Sbjct: 216 IIDGYTDTDGDYSYNLQLSQQRSLAVAQYLIDIQGNFLNDEQSQELEKYLTVNGHSMANP 275
Query: 134 SVYGHDEDAYAKNRRAIVFLK 154
+ +RR V +
Sbjct: 276 VLDADGNVDKDASRRVEVKFR 296
>gi|262362261|gb|ACY58982.1| chemotaxis MotB protein [Yersinia pestis D106004]
Length = 276
Score = 40.2 bits (92), Expect = 0.096, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 40/123 (32%), Gaps = 8/123 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F S + P +L + L + GH D+L S+
Sbjct: 150 QIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPNKLSLSGHTDDLPYARGERGYSN 209
Query: 99 IALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A +A G+ ++ +V M +D NRR + + R
Sbjct: 210 WELSADRANASRRELLAGGLDEGKILRVVGMASTMRLKEQASDD--PVNRRISILVLNKR 267
Query: 158 ANT 160
NT
Sbjct: 268 LNT 270
>gi|282881743|ref|ZP_06290406.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1]
gi|281304502|gb|EFA96599.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1]
Length = 382
Score = 40.2 bits (92), Expect = 0.097, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 37/90 (41%), Gaps = 2/90 (2%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGL 103
++++ +V F + + + + + ++++ H I+G+A G + L
Sbjct: 272 ATNLQPTVLFRQGQSVVDRSQMPNIELIANYMKNHKSATVTIKGYASPEGPTELNQRLSE 331
Query: 104 RRAYAVFNYFVARGIS-ASRMKVTSYGKEM 132
RA V N V + +R+K G+
Sbjct: 332 NRAKNVKNLLVDKYRIAPNRLKTVGMGETN 361
>gi|91776291|ref|YP_546047.1| flagellar motor protein MotB [Methylobacillus flagellatus KT]
gi|91710278|gb|ABE50206.1| OmpA/MotB [Methylobacillus flagellatus KT]
Length = 308
Score = 40.2 bits (92), Expect = 0.097, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 40/127 (31%), Gaps = 20/127 (15%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS-----RNSS 98
+ F +S ++P Q+L +G L + GH D S+
Sbjct: 161 QIVDEQNRPMFASSKAELQPYARQILHEIGQLLNDVPNKISLSGHTDAAPYPSGERYYSN 220
Query: 99 IALGLRRAYAVFNYFVARGISASRM-------KVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
L RA A V+ G+ ++ + K+ P NRR +
Sbjct: 221 WELSSDRANASRRELVSGGMKEEKLLRVVGLSSAVLFDKDNPLNP--------INRRISI 272
Query: 152 FLKGCRA 158
+ +A
Sbjct: 273 IIMNKKA 279
>gi|217978517|ref|YP_002362664.1| OmpA/MotB domain protein [Methylocella silvestris BL2]
gi|217503893|gb|ACK51302.1| OmpA/MotB domain protein [Methylocella silvestris BL2]
Length = 325
Score = 40.2 bits (92), Expect = 0.098, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 40/110 (36%), Gaps = 7/110 (6%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRR 105
+V + F+ S S+ Q L + + + GH D G ++ L + R
Sbjct: 213 AVPMPITFEYRSASLTDEGRQAADELARAIREQQPQIVRLVGHTDLRGGPEYNMKLSVAR 272
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPS----VYGHDEDA-YAKNRRAI 150
A AV Y I A ++ G P G +D YA NRR
Sbjct: 273 AEAVAAYLKENNI-AVTVEPEGVGAAEPLQLSDASGLTQDDVYALNRRVE 321
>gi|218658934|ref|ZP_03514864.1| flagellar motor protein MotB [Rhizobium etli IE4771]
Length = 151
Score = 40.2 bits (92), Expect = 0.10, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 6/110 (5%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS---RNSSIALGLRR 105
D F+ S R + + +G+ L++ I GH D +N + L + R
Sbjct: 42 NDDSMFNIGSAVPRQEMVLAMERIGTILKERGGAVAIRGHTDGRQYKGAQNENWRLSMDR 101
Query: 106 AYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
A + + V G+ R+ V+ + + E A NRR + ++
Sbjct: 102 AQSAYYMLVRGGLDEKRISQVSGFADRRLKLPA--EPFNAANRRIEILVQ 149
>gi|209525121|ref|ZP_03273665.1| OmpA/MotB domain protein [Arthrospira maxima CS-328]
gi|209494530|gb|EDZ94841.1| OmpA/MotB domain protein [Arthrospira maxima CS-328]
Length = 322
Score = 40.2 bits (92), Expect = 0.10, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLR 104
+ + ++F+ S I P D+++++ + + + I GH D GS + L L
Sbjct: 204 VRIENRIYFNFGSAQINPQDMKIITRITEFLDQYPKLSLRIIGHTDLRGSAAINQQLALN 263
Query: 105 RAYAVFNYFVARGISASRMKVTS 127
RA AV + +GI R+++
Sbjct: 264 RATAVRDALTKQGIDPKRLEIVG 286
>gi|304413521|ref|ZP_07394994.1| flagellar motor component [Candidatus Regiella insecticola LSR1]
gi|304284364|gb|EFL92757.1| flagellar motor component [Candidatus Regiella insecticola LSR1]
Length = 326
Score = 40.2 bits (92), Expect = 0.10, Method: Composition-based stats.
Identities = 28/142 (19%), Positives = 51/142 (35%), Gaps = 9/142 (6%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD 82
+K + + LN + + + D F SS + P ++L+ L L +
Sbjct: 145 SKAHNAQSNLNIEMVPQGLRILIQDDKKREMFPLSSALLTPFFTRLLAELAPVLNDLNNK 204
Query: 83 FLIEGHADELGSR----NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+I GH D R ++ L RA A G+ + + + + +
Sbjct: 205 VIITGHTDGARYRDQELYNNWNLSGERAMAARRALERGGLDDAHILQINAMADQMLLDEK 264
Query: 139 DEDAYAKNRRAIVFLKGCRANT 160
D A NRR + + +A T
Sbjct: 265 DPLG-AANRRIEIMVL-TKAAT 284
>gi|322433005|ref|YP_004210254.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
gi|321165232|gb|ADW70936.1| OmpA/MotB domain protein [Acidobacterium sp. MP5ACTX9]
Length = 309
Score = 40.2 bits (92), Expect = 0.10, Method: Composition-based stats.
Identities = 26/108 (24%), Positives = 39/108 (36%), Gaps = 7/108 (6%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG----SRNSSIALGLRRAYA 108
FF+T S PA ++L L L+ IEGH D + + L RA
Sbjct: 135 FFETGSSKPTPALEEILKVLSEQLKSLPNSISIEGHTDAQPYATATVYGNWELSTDRANV 194
Query: 109 VFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
GI ++ V + + V D A NRR + ++
Sbjct: 195 ARREMQENGIRTDQVSQVRGFADQRLHVPEKPLD--ASNRRISLVVQN 240
>gi|308050006|ref|YP_003913572.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
gi|307632196|gb|ADN76498.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
Length = 328
Score = 40.2 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 47/144 (32%), Gaps = 6/144 (4%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+G ++I+ + + F S + P +L +L L++
Sbjct: 150 AGKIIAQSEIADNVAIQVVPQGLKILIRDNLQQFMFARGSSRMTPYFEDLLFSLAPLLKQ 209
Query: 79 HDCDFLIEGHADELG---SRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPS 134
++ GH D + +S+ L RA G+ ++ V ++P
Sbjct: 210 VQNPLMVSGHTDSTHFRSNDSSNWELSSERALEARRALEFGGVGRNQFFNVVGMADQVPV 269
Query: 135 VYGHDEDAYAKNRRAIVFLKGCRA 158
+ NRR + + +A
Sbjct: 270 EPSDPRS--SANRRIELMVLTHKA 291
>gi|51597618|ref|YP_071809.1| hypothetical protein YPTB3318 [Yersinia pseudotuberculosis IP
32953]
gi|51590900|emb|CAH22556.1| Putative chemotaxis membrane protein [Yersinia pseudotuberculosis
IP 32953]
Length = 264
Score = 40.2 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 49/141 (34%), Gaps = 8/141 (5%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD 82
T + + L + + + D F SS + P ++L L + D
Sbjct: 101 TSAYNAQSNLQMEVVPQGLRILIQDDQQRDMFQRSSAVLTPFFSRLLGELAPAFNEMDNK 160
Query: 83 FLIEGHADELGSR----NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+I GH D R ++ L RA V G+ R+ + + +
Sbjct: 161 IIITGHTDASRYRDQLLYNNWNLSGERALMAHKALVNGGLDEGRVLQINTMADQMLLDPT 220
Query: 139 DEDAYAKNRRAIVFLKGCRAN 159
D A AKNRR + + A+
Sbjct: 221 DPLA-AKNRRIEIMVLTKTAS 240
>gi|124004173|ref|ZP_01689019.1| putative exported isomerase [Microscilla marina ATCC 23134]
gi|123990243|gb|EAY29742.1| putative exported isomerase [Microscilla marina ATCC 23134]
Length = 777
Score = 39.8 bits (91), Expect = 0.11, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 34/103 (33%), Gaps = 9/103 (8%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
++V+FD + + L ++ + + + GH D + L +R
Sbjct: 569 NNVYFDKEQKVLDQNAQRTLLSVANLLKKNRHYKLELSGHID----PAEPVGLSSQRLQN 624
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
++ + + I R+ Y P +NRR
Sbjct: 625 TLDFLLRQRIGVDRITTKDYKNSKPV----SIKDRRRNRRIEF 663
>gi|71065432|ref|YP_264159.1| OmpA/MotB [Psychrobacter arcticus 273-4]
gi|71038417|gb|AAZ18725.1| probable OmpA/MotB [Psychrobacter arcticus 273-4]
Length = 211
Score = 39.8 bits (91), Expect = 0.11, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 52/156 (33%), Gaps = 23/156 (14%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL----- 72
+ ++++ T +++ EQ ++ D+VF S I P +N+
Sbjct: 56 ATLLEDIQTSVATQGAGNLIDFNMEQSKITLKDNVFAR-GSACITPEAKTAFNNIEDKIT 114
Query: 73 GSWLEKHDCDFLIEGHADE-------------LGSRNSSIALGLRRAYAVFNYFVAR--G 117
+ + +EGH D + + L RA V +
Sbjct: 115 SFLQQSSNAKIFVEGHTDNIPVSQPVTDYRRFCTVYDDNYTLSAARAREARKLLVGQLDT 174
Query: 118 ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
A R+ V YG P G + A NRR V L
Sbjct: 175 SIAKRIVVAGYGDSQPI-KGISPEDDA-NRRVEVRL 208
>gi|313191705|emb|CBW30518.1| putative outer membrane protein A [Bordetella petrii]
Length = 161
Score = 39.8 bits (91), Expect = 0.12, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 41/113 (36%), Gaps = 3/113 (2%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
+GI D + FFD +++P Q+L + +
Sbjct: 51 ATGIPGCDGVPVAQAPA--AKPTPMATKVVFNADTFFDFDKSTLKPEGRQLLQQVAQQAQ 108
Query: 78 KHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
+ + GH D +G+ + L RRA +V Y V+ GI +R+ G
Sbjct: 109 GINLETIIAVGHTDSIGTEQYNQGLSERRAASVKAYLVSLGIDPNRIYTEGKG 161
>gi|229588694|ref|YP_002870813.1| putative exported flagellar protein [Pseudomonas fluorescens SBW25]
gi|229360560|emb|CAY47417.1| putative exported flagellar protein [Pseudomonas fluorescens SBW25]
Length = 302
Score = 39.8 bits (91), Expect = 0.12, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNSSIALGLRRAYAV 109
V F + A + L + ++++ + GH+D G+R ++ + RR AV
Sbjct: 176 VGFPGGGIELDAAAKKKLDVILAFMKADPTVNHIELNGHSDNGGNRLTNRDVSRRRGLAV 235
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGH 138
+Y A GI S++ + +G+ P
Sbjct: 236 MDYLKANGIPESQITLRFHGESYPLAPNT 264
>gi|237731926|ref|ZP_04562407.1| flagellar motor protein MotB [Citrobacter sp. 30_2]
gi|226907465|gb|EEH93383.1| flagellar motor protein MotB [Citrobacter sp. 30_2]
Length = 309
Score = 39.8 bits (91), Expect = 0.12, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS-----RNSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 152 QIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNGIPNRISLSGHTDDYPYANGEKGYSN 211
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A V+ G+ + ++V M ED A NRR + + +
Sbjct: 212 WELSADRANASRRELVSGGLDDGKVLRVVGMAATMRLSDRGPED--AINRRISLLVLNKQ 269
Query: 158 A 158
A
Sbjct: 270 A 270
>gi|307266869|ref|ZP_07548390.1| OmpA/MotB domain protein [Thermoanaerobacter wiegelii Rt8.B1]
gi|306918116|gb|EFN48369.1| OmpA/MotB domain protein [Thermoanaerobacter wiegelii Rt8.B1]
Length = 230
Score = 39.8 bits (91), Expect = 0.12, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 43/129 (33%), Gaps = 20/129 (15%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL---------EKHDCDFLIEGHADELGSR 95
+ S + VFFD + ++ + L+ +K+ ++EGH D+ G
Sbjct: 83 AISFSEGVFFDKDKFELKEEGKRYLNEFIPRYLSILMDPRFKKYISQIIVEGHTDDTGDY 142
Query: 96 NSSIALGLRRAYAVFNYF----------VARGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
++ L +RA+ V Y + S + + + K
Sbjct: 143 MYNLELSQKRAFEVVRYILQSNIKGIDSKTKADLMSYITANGRSYSQLIIENG-KVNRQK 201
Query: 146 NRRAIVFLK 154
+RR +
Sbjct: 202 SRRVEFKFR 210
>gi|120555689|ref|YP_960040.1| OmpA/MotB domain-containing protein [Marinobacter aquaeolei VT8]
gi|120325538|gb|ABM19853.1| OmpA/MotB domain protein [Marinobacter aquaeolei VT8]
Length = 319
Score = 39.8 bits (91), Expect = 0.12, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 39/126 (30%), Gaps = 10/126 (7%)
Query: 40 LQEQFSSSVGDS---VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD----EL 92
E + D FD+ ++ +L L L D I GH D
Sbjct: 143 TDEGLRIQIVDRSGRPMFDSGRDELKYYSQDILFELAKKLGSVDNKISITGHTDATPFSG 202
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
++ L RA VA G+ ++ +V + + A NRR +
Sbjct: 203 RPGYTNWELSADRANTARRALVAGGVRLEQIARVVGLSDSV-LFDKDNPTA-PVNRRISI 260
Query: 152 FLKGCR 157
+ +
Sbjct: 261 IVLNKK 266
>gi|225628536|ref|ZP_03786570.1| lipoprotein [Brucella ceti str. Cudo]
gi|237816578|ref|ZP_04595570.1| lipoprotein [Brucella abortus str. 2308 A]
gi|225616382|gb|EEH13430.1| lipoprotein [Brucella ceti str. Cudo]
gi|237787391|gb|EEP61607.1| lipoprotein [Brucella abortus str. 2308 A]
Length = 104
Score = 39.8 bits (91), Expect = 0.12, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 34/107 (31%), Gaps = 11/107 (10%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
++F RP Q+ + G D + RA A++N
Sbjct: 1 MYFPQDVTVFRPTSAQINQLHTLLW-PVPKHINVRGLTDNNCPPPGDTQVARVRALAIYN 59
Query: 112 YFVARGISASRMK-----VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ + +G+ ASR+ V Y P NRR + +
Sbjct: 60 WLINQGVPASRITISYAPVKDYASNAPLSP-----GRVLNRRVDIEI 101
>gi|307566204|ref|ZP_07628655.1| OmpA family protein [Prevotella amnii CRIS 21A-A]
gi|307345097|gb|EFN90483.1| OmpA family protein [Prevotella amnii CRIS 21A-A]
Length = 230
Score = 39.8 bits (91), Expect = 0.12, Method: Composition-based stats.
Identities = 16/117 (13%), Positives = 39/117 (33%), Gaps = 15/117 (12%)
Query: 53 FFDTSSYSIRPADIQVLSNLGS---------WLEKHDCDFLIEGHADELGSRNSSIALGL 103
FD + ++P +L + + + + IEGH D G ++ L
Sbjct: 98 LFDYNKTDLKPRFAAILHDFFPRYMALLSKPQYKDNIEEIRIEGHTDSSGGYIYNMELSQ 157
Query: 104 RRAYAVFNYFVARG------ISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
R +V + + + + + P + ++ ++RR ++
Sbjct: 158 DRTRSVLAFCLNQITRKDFEWAKYAITANGLSSSHPIIGKDGKEDADRSRRVEFKIR 214
>gi|183598599|ref|ZP_02960092.1| hypothetical protein PROSTU_01997 [Providencia stuartii ATCC 25827]
gi|188020776|gb|EDU58816.1| hypothetical protein PROSTU_01997 [Providencia stuartii ATCC 25827]
Length = 317
Score = 39.8 bits (91), Expect = 0.12, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 38/110 (34%), Gaps = 9/110 (8%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSIALGLRR 105
+ F S + P +L + L I GH D+L ++ L R
Sbjct: 155 NRPMFMVGSAYVEPHMRDILRAIAPLLNDVPNKISISGHTDDLPYANGANYNNWELSADR 214
Query: 106 AYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAK-NRRAIVFL 153
A A +A G++ ++ +V + + A NRR + +
Sbjct: 215 ANASRRELIAGGLNQDKILRVVGMASSIHLDKNN---GLAPVNRRISIIV 261
>gi|149928472|ref|ZP_01916707.1| flagellar motor protein [Limnobacter sp. MED105]
gi|149822806|gb|EDM82057.1| flagellar motor protein [Limnobacter sp. MED105]
Length = 322
Score = 39.8 bits (91), Expect = 0.12, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 39/121 (32%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ FD+ S ++ +L NL L + + GH D S+
Sbjct: 164 QIVDERNRPMFDSGSAVLKDYMKDILRNLTKLLNQVPNKLTLSGHTDATPYAAGNKGYSN 223
Query: 99 IALGLRRAYAVFNYFV-ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A A + ++V + D A A NRR + + R
Sbjct: 224 WELSADRANASRREMTLAGMPDSKMLRVVGLASSVSL-DEKDPYA-AVNRRIAIVVMNKR 281
Query: 158 A 158
A
Sbjct: 282 A 282
>gi|15887914|ref|NP_353595.1| flagellar motor protein MotB [Agrobacterium tumefaciens str. C58]
gi|15155508|gb|AAK86380.1| flagellar motor protein, PAL/OmpA family [Agrobacterium tumefaciens
str. C58]
Length = 433
Score = 39.8 bits (91), Expect = 0.12, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 49/114 (42%), Gaps = 6/114 (5%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR---NSSIALGLRR 105
++ F+ S R + + +G L++ +I GH D + N + L + R
Sbjct: 322 AETPMFNIGSAVPRGELVLAMEKIGKLLQERGGSVVIRGHTDGRQFKGEANDNWRLSMDR 381
Query: 106 AYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
A++ + V G+S R+ +V+ + V + A A NRR + L+ R
Sbjct: 382 AHSAYYMLVRGGLSEERVKQVSGFADRRLQVP-SNPLADA-NRRIEILLEADRG 433
>gi|117676216|ref|YP_863792.1| OmpA/MotB domain-containing protein [Shewanella sp. ANA-3]
gi|117615040|gb|ABK50493.1| OmpA/MotB domain protein [Shewanella sp. ANA-3]
Length = 247
Score = 39.8 bits (91), Expect = 0.12, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 56/137 (40%), Gaps = 12/137 (8%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSS----------YSIRPAD 65
++S + + +E +QF++ + T YS
Sbjct: 99 AAVSSAYSDSYLPTQAPAANDEKRDLQQFNADAQIIIHQPTDRTLYFEYDAVGYSDIAEA 158
Query: 66 IQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
VL+ +L K L+ G+AD GS + ++ALG +RA V N V +G+ + + V
Sbjct: 159 QYVLAKHRDYLLKTHGRVLVVGYADISGSADYNLALGRKRAERVKNELVTKGVPSELISV 218
Query: 126 TSYGKEM--PSVYGHDE 140
SYG P + GH +
Sbjct: 219 VSYGASYSPPLMSGHTD 235
>gi|262198940|ref|YP_003270149.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
gi|262082287|gb|ACY18256.1| OmpA/MotB domain protein [Haliangium ochraceum DSM 14365]
Length = 570
Score = 39.8 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 56/161 (34%), Gaps = 21/161 (13%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSY--------- 59
++ + + + D+ D NE+ ++ + V S
Sbjct: 405 AIAGVESGAGCPDGDGDSVRDRLDNCPNEAGERDYYGCQTAQRVALSEDSVLLAAPVPFR 464
Query: 60 --SIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
++R + VL L + + IE H E ++ L +RA AV Y + R
Sbjct: 465 GGALRERSLPVLDELAAVLTAHPELRVRIEVHVAERRDAAANQRLSEQRAAAVRAYLLRR 524
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDA----YAKNRRAIVFL 153
G+ R++ G+ ++ G E A A R V +
Sbjct: 525 GLDEERVEGAGMGES--ALRGDTEAAARGDKA---RVDVRI 560
>gi|220924426|ref|YP_002499728.1| OmpA/MotB domain-containing protein [Methylobacterium nodulans ORS
2060]
gi|219949033|gb|ACL59425.1| OmpA/MotB domain protein [Methylobacterium nodulans ORS 2060]
Length = 277
Score = 39.8 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 38/151 (25%), Gaps = 10/151 (6%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
+ M S+ I+ + + S+ D F S Q
Sbjct: 115 FGLAMASLRQALQDLPDIAELSKNVLIHETERGLDVSLVDQDNRSMFPDGSTRPNDRTRQ 174
Query: 68 VLSNLGSWLEKHDCDFLIEGHADE----LGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
VL L + + G+ L RA +V GI R
Sbjct: 175 VLERLAPTIRSLSNRIAVAGYTAATRPGRRPPAPPWELSTGRAISVREILAGAGIPDDRF 234
Query: 124 KVT-SYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V P + A NRR + L
Sbjct: 235 AVVSGKADTEPLFP-DNPYI-AANRRVTITL 263
>gi|146281853|ref|YP_001172006.1| chemotaxis protein MotB-related protein [Pseudomonas stutzeri
A1501]
gi|145570058|gb|ABP79164.1| chemotaxis protein MotB-related protein [Pseudomonas stutzeri
A1501]
Length = 254
Score = 39.8 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 123 MKVTSYGKEMP-SVYGHDEDAYAKNRRAIV 151
V+ YG+ P E+ + +NRR +
Sbjct: 201 FSVSGYGETRPAVADQVTEEDFKRNRRIDI 230
>gi|209963560|ref|YP_002296475.1| chemotaxis MotB protein [Rhodospirillum centenum SW]
gi|7025363|gb|AAF35851.1|AF220005_2 lateral flagellar motor protein MotB [Rhodospirillum centenum]
gi|209957026|gb|ACI97662.1| chemotaxis MotB protein [Rhodospirillum centenum SW]
Length = 325
Score = 39.8 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 40/134 (29%), Gaps = 10/134 (7%)
Query: 29 SSPDTVLNESSLQEQFSSSVGDSV-FFDTSS--YSIRPADIQVLSNLGSWLEKHDCDFLI 85
+ L + + D F S + + +L + L I
Sbjct: 182 ADLSQNLVFERTADGLRIQITDRPHFSMFDSGATDLNGRAVTLLGIVAEALSGVPNRIAI 241
Query: 86 EGHAD----ELGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDE 140
GH D +R + L RA A + +GI R+ +V + +
Sbjct: 242 SGHTDGRPFAANARYGNWELSADRANAARRVLLQKGIQPGRVARVEGLADTLHLLPED-- 299
Query: 141 DAYAKNRRAIVFLK 154
+NRR + +
Sbjct: 300 PGDPRNRRISIIVM 313
>gi|187920655|ref|YP_001889687.1| OmpA/MotB domain-containing protein [Burkholderia phytofirmans
PsJN]
gi|187719093|gb|ACD20316.1| OmpA/MotB domain protein [Burkholderia phytofirmans PsJN]
Length = 329
Score = 39.8 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 43/120 (35%), Gaps = 8/120 (6%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSSI 99
+ F + S ++P + +L+ +G+ L D I GH D + S+
Sbjct: 172 IVDSQNRPMFPSGSSKLQPYAVTILTQIGAALNDVDNRVSIAGHTDAVPYTAGPEGYSNW 231
Query: 100 ALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
L RA A VA G+ ++ +V +P NRR + + A
Sbjct: 232 ELSSERANAARRSLVAGGMHGEKLLQVRGLADVLPL--NSQVADEPTNRRISILVLNKAA 289
>gi|327480088|gb|AEA83398.1| chemotaxis protein MotB-related protein [Pseudomonas stutzeri DSM
4166]
Length = 254
Score = 39.8 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 14/30 (46%), Gaps = 1/30 (3%)
Query: 123 MKVTSYGKEMP-SVYGHDEDAYAKNRRAIV 151
V+ YG+ P E+ + +NRR +
Sbjct: 201 FSVSGYGETRPAVADQVTEEDFKRNRRIDI 230
>gi|283832712|ref|ZP_06352453.1| chemotaxis MotB protein [Citrobacter youngae ATCC 29220]
gi|291072391|gb|EFE10500.1| chemotaxis MotB protein [Citrobacter youngae ATCC 29220]
Length = 309
Score = 39.8 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS-----RNSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 152 QIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNGIPNRISLSGHTDDYPYANGEKGYSN 211
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A V+ G+ + ++V M ED A NRR + + +
Sbjct: 212 WELSADRANASRRELVSGGLDDGKVLRVVGMAATMRLSDRGPED--AINRRISLLVLNKQ 269
Query: 158 A 158
A
Sbjct: 270 A 270
>gi|170692674|ref|ZP_02883836.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
gi|170142330|gb|EDT10496.1| OmpA/MotB domain protein [Burkholderia graminis C4D1M]
Length = 328
Score = 39.8 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 43/120 (35%), Gaps = 8/120 (6%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSSI 99
+ F + S ++ + +L+ +G+ L + I GH D + S+
Sbjct: 171 IVDSQNRPMFASGSPRLQTYAVAILTQIGAALNDVENRISIAGHTDAVPYTGGPVGYSNW 230
Query: 100 ALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
L RA A V+ G+ ++ +V +P + NRR + + A
Sbjct: 231 ELSSERANAARRALVSGGMHGEKLLQVRGLADVLPL--NSNVVDEPTNRRISILVMNKAA 288
>gi|113477202|ref|YP_723263.1| OmpA/MotB [Trichodesmium erythraeum IMS101]
gi|110168250|gb|ABG52790.1| OmpA/MotB [Trichodesmium erythraeum IMS101]
Length = 302
Score = 39.8 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 50/142 (35%), Gaps = 8/142 (5%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVG--DSVFFDTSSYSIRPADIQVLSNLGS 74
S + +S ++ S QE++ + + F+ + + Q +++L
Sbjct: 160 STAASQAKPETVSGQTDIVATSDSQEKYLTEAKTLGQIKFEINEVELSSPAKQTVNSLIP 219
Query: 75 WLEKH---DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE 131
+ K+ +EGH +G + + RA V Y + + + G
Sbjct: 220 EINKYDPNRVTIKVEGHTSRVGDAQLNKEISQDRANVVVAYLKEKNLPHQVIS-EGMGYS 278
Query: 132 MPSVYGHDEDAYAKNRRAIVFL 153
P + + N+R ++ L
Sbjct: 279 QPL-PNSNPASD-INQRTVIIL 298
>gi|149184887|ref|ZP_01863204.1| hypothetical protein ED21_17577 [Erythrobacter sp. SD-21]
gi|148830998|gb|EDL49432.1| hypothetical protein ED21_17577 [Erythrobacter sp. SD-21]
Length = 242
Score = 39.8 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 40/141 (28%), Gaps = 34/141 (24%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGS--------------------WLEKHDCDFL 84
+ D V FD + + +S + S
Sbjct: 82 VLRLPDDVLFDKGQWELTERGQAAISKVASAMVEVLPCYTASDLCEGERSPHLIDAVFVE 141
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGI--------------SASRMKVTSYGK 130
+D + ++ L +RRA F SA + ++ YG
Sbjct: 142 GHTDSDVMSGGMNNYGLSVRRAETTFTMLQRNQPALRGFLNRPAGEDGSAPILSLSGYGP 201
Query: 131 EMPSVYGHDEDAYAKNRRAIV 151
+ P G E+A +NRR +
Sbjct: 202 DRPVDRGDSEEAKKRNRRIDL 222
>gi|254443045|ref|ZP_05056521.1| OmpA family protein [Verrucomicrobiae bacterium DG1235]
gi|198257353|gb|EDY81661.1| OmpA family protein [Verrucomicrobiae bacterium DG1235]
Length = 512
Score = 39.8 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 37/107 (34%), Gaps = 5/107 (4%)
Query: 50 DSVFFDTSSYSIRPADIQVLS-NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
+ F + + + P + + + D L+ GH G ++ L RA +
Sbjct: 399 RPISFQSGTAGLSPEGVSSIEEMVDILQNYPDFRILVAGHTSARGDAEANRQLSEERARS 458
Query: 109 VFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAYA-KNR--RAIV 151
V Y V I R++ G E P E A +NR R
Sbjct: 459 VAKYLVDHYAIDEDRVRAVGVGGEQPLRRLAGESYRAHQNRLSRVEF 505
>gi|186896751|ref|YP_001873863.1| hypothetical protein YPTS_3453 [Yersinia pseudotuberculosis PB1/+]
gi|186699777|gb|ACC90406.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis PB1/+]
Length = 303
Score = 39.8 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 49/141 (34%), Gaps = 8/141 (5%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD 82
T + + L + + + D F SS + P ++L L + D
Sbjct: 140 TSAYNAQSNLQMEVVPQGLRILIQDDQQRDMFQRSSAVLTPFFSRLLGELAPAFNEMDNK 199
Query: 83 FLIEGHADELGSR----NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+I GH D R ++ L RA V G+ R+ + + +
Sbjct: 200 IIITGHTDASRYRDQLLYNNWNLSGERALMAHKALVNGGLDEGRVLQINTMADQMLLDPT 259
Query: 139 DEDAYAKNRRAIVFLKGCRAN 159
D A AKNRR + + A+
Sbjct: 260 DPLA-AKNRRIEIMVLTKTAS 279
>gi|149908742|ref|ZP_01897403.1| Hypothetical chemotaxis LafU protein [Moritella sp. PE36]
gi|149808284|gb|EDM68223.1| Hypothetical chemotaxis LafU protein [Moritella sp. PE36]
Length = 334
Score = 39.8 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 49/146 (33%), Gaps = 7/146 (4%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN 71
A+ + I + + D + L+ + +F S + P VL +
Sbjct: 145 ALLASKLEAITDSIGAAENIDIEVVPQGLRILLHDNAKHKMFRR-GSAQMTPFFQDVLRS 203
Query: 72 LGSWLEKHDCDFLIEGHADELGSR---NSSIALGLRRAYAVFNYFVARGISASRM-KVTS 127
L + +I GH D ++ L +RA G+ R+ +V +
Sbjct: 204 LAPVFIPIENKLMISGHTDRSKFHNAAFTNWELSSQRALQARQMLQIGGMPRERVAQVVA 263
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFL 153
MP + + + NRR + L
Sbjct: 264 MSDTMPI-DAANPKS-SVNRRIELLL 287
>gi|170748396|ref|YP_001754656.1| OmpA/MotB domain-containing protein [Methylobacterium radiotolerans
JCM 2831]
gi|170654918|gb|ACB23973.1| OmpA/MotB domain protein [Methylobacterium radiotolerans JCM 2831]
Length = 286
Score = 39.8 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 26/148 (17%), Positives = 41/148 (27%), Gaps = 10/148 (6%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLS 70
+ S+ I+ + +E + S+ D F S +VL
Sbjct: 128 AIASLRQALQTMPDIAELSKNIVIEPTKEGVNVSLVDQDGRSMFREGSVEPYERTRRVLE 187
Query: 71 NLGSWLEKHDCDFLIEGHADELGSRN----SSIALGLRRAYAVFNYFVARGISASRMKVT 126
L L + I G+ + +L RA AV G+
Sbjct: 188 ALAPALRRMPNRLSITGYTAVARPGSARAGEPWSLSAGRALAVREILSGAGVPNDNFSAV 247
Query: 127 -SYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G P + A NRR + L
Sbjct: 248 SGRGDTEPVFP-DNPY-LAPNRRVTITL 273
>gi|257094100|ref|YP_003167741.1| flagellar motor protein MotB [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257046624|gb|ACV35812.1| OmpA/MotB domain protein [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 319
Score = 39.4 bits (90), Expect = 0.15, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 41/121 (33%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ FDTSS ++P +L +G L + GH D S+
Sbjct: 165 QIVDEQNRPMFDTSSAELKPHTRVILREIGKALNAVHNKLSLSGHTDAAQYGGGDKGFSN 224
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A +A G+ + ++V + + NRR + + R
Sbjct: 225 WELSANRANASRRELIAGGMDEHKVLRVVGLASTVLFDKNDPLS--SINRRISIVVLNKR 282
Query: 158 A 158
A
Sbjct: 283 A 283
>gi|23010955|ref|ZP_00051470.1| COG1360: Flagellar motor protein [Magnetospirillum magnetotacticum
MS-1]
Length = 464
Score = 39.4 bits (90), Expect = 0.15, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 38/134 (28%), Gaps = 12/134 (8%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+P + E S+ D + F S P ++ L + L ++
Sbjct: 332 APAPRVEVRRTGEGVLISITDEINFSMFGIGSAEPTPKVVKALERIAKILNTRPGRVVVR 391
Query: 87 GHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE-----MPSVYGHDED 141
GH D S R + A+ P + +
Sbjct: 392 GHTDARP--FRSETYDNWRLSRPGRRWPPTCWCAAASTRRGSSASKLCRPQPRIAADPKA 449
Query: 142 AYAKNRRAIVFLKG 155
A+NRR + L+G
Sbjct: 450 --AENRRIEILLRG 461
>gi|163732772|ref|ZP_02140217.1| OmpA family domain protein [Roseobacter litoralis Och 149]
gi|161394132|gb|EDQ18456.1| OmpA family domain protein [Roseobacter litoralis Och 149]
Length = 217
Score = 39.4 bits (90), Expect = 0.15, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 5/106 (4%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKH--DCDFLIEGHADELGSRNSSIALGLRRAYA 108
++ F S + + + L+++ ++ G D +G + LGLRRA A
Sbjct: 20 TINFAFDSAELDAEAQAKIVEIAERLKENPSYKPTVLIGFTDAVGGLGYNDRLGLRRANA 79
Query: 109 VFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V + +G+S R+ V+S G+ V + +NRR V L
Sbjct: 80 VSAALLEQGVSVDRIGGVSSRGERELLVSVAGPE--RQNRRVTVTL 123
>gi|119947181|ref|YP_944861.1| OmpA/MotB domain-containing protein [Psychromonas ingrahamii 37]
gi|119865785|gb|ABM05262.1| OmpA/MotB domain protein [Psychromonas ingrahamii 37]
Length = 306
Score = 39.4 bits (90), Expect = 0.15, Method: Composition-based stats.
Identities = 19/113 (16%), Positives = 35/113 (30%), Gaps = 6/113 (5%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSS---IALGLRRA 106
D ++ + P +L S + +I GH D L +RA
Sbjct: 154 DQKMYERGGTQLTPFYEDMLLEFSSVFNAIENGVVITGHTDSAPYNGQQVSNWELSSQRA 213
Query: 107 YAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
+ G+ + + V P + + + NRR V + +A
Sbjct: 214 NSARRIMELGGLKKANITQVIGMANTKPIDKQN--ELSSINRRVEVIILTRQA 264
>gi|327405902|ref|YP_004346740.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
16823]
gi|327321410|gb|AEA45902.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
Length = 238
Score = 39.4 bits (90), Expect = 0.15, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 15/110 (13%)
Query: 52 VFFDTSSYSIRPADIQVLSNLG-SWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
VFF +SI + Q + +L + F I ++D GS S++ L RA +
Sbjct: 133 VFFPYKKWSINLSFYQEIDDLVNQYFNHKGSSFKINAYSDSHGSEESNLKLSKDRAKFIR 192
Query: 111 NYFVARGISASR-MKVTSYGK------EMPSVYGHDEDAYAKNRRAIVFL 153
NY + +R ++ G P + NRRA++ L
Sbjct: 193 NYLINEKKVDARDIQTEGKGSKSKERITEPDLD-------FMNRRAVIIL 235
>gi|332284002|ref|YP_004415913.1| chemotaxis protein [Pusillimonas sp. T7-7]
gi|330427955|gb|AEC19289.1| chemotaxis protein [Pusillimonas sp. T7-7]
Length = 310
Score = 39.4 bits (90), Expect = 0.16, Method: Composition-based stats.
Identities = 19/127 (14%), Positives = 31/127 (24%), Gaps = 20/127 (15%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGL 103
+ F T S ++ +L LG + I GH D + +
Sbjct: 150 QIIDKQNRPMFATGSAQVQSYMRDILRQLGPTFNRLPNPLSISGHTDSIQYASGERDYSN 209
Query: 104 RRAYAVFNYFVARGISASRMKVTSYGKEM------------PSVYGHDEDAYAKNRRAIV 151
A + + G+ A A NRR +
Sbjct: 210 WELSA-----DRANAARRELVAGGMGESKVKRVLGLSSSVSLIKDN--PAA-AVNRRISI 261
Query: 152 FLKGCRA 158
+ RA
Sbjct: 262 VVLNQRA 268
>gi|73539429|ref|YP_299796.1| flagellar motor protein MotB [Ralstonia eutropha JMP134]
gi|72122766|gb|AAZ64952.1| OmpA/MotB [Ralstonia eutropha JMP134]
Length = 325
Score = 39.4 bits (90), Expect = 0.16, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 38/121 (31%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS-----RNSS 98
+ F T + P +L +G + + GH D S+
Sbjct: 157 QILDTQNRPMFRTGRAEVEPYMRAILREIGPVINDLPNKVSLSGHTDSANYSNGERTYSN 216
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A +A G+ + ++V MP + NRR + + +
Sbjct: 217 WELSSDRANASRRELIAGGMQEGKVLRVLGLAATMPLD--KSDLLAPVNRRISIVVLNQK 274
Query: 158 A 158
A
Sbjct: 275 A 275
>gi|91975488|ref|YP_568147.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
gi|91681944|gb|ABE38246.1| OmpA/MotB [Rhodopseudomonas palustris BisB5]
Length = 212
Score = 39.4 bits (90), Expect = 0.16, Method: Composition-based stats.
Identities = 29/120 (24%), Positives = 46/120 (38%), Gaps = 10/120 (8%)
Query: 39 SLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGHADELGSR 95
+ + ++ + FD +S +I + LG L D F++ GH D +G
Sbjct: 87 ATLAKDKPNIDLEITFDYNSANISRKAEPAVDALGKALSNPDLKGSTFVVAGHTDSIGGD 146
Query: 96 NSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMP--SVYGHDEDAYAKNRRAIVF 152
+ L RRA + V + A S + YG+ P +V D NRR V
Sbjct: 147 AYNQELSERRADTIKRVLVEKYGIAGSDLVTVGYGENKPKDAVRPADPS----NRRVQVV 202
>gi|224825768|ref|ZP_03698872.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002]
gi|224601992|gb|EEG08171.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002]
Length = 325
Score = 39.4 bits (90), Expect = 0.16, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 36/116 (31%), Gaps = 10/116 (8%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIAL-------GLRR 105
F+ S I +L +G D L+ GH D L + A R
Sbjct: 177 MFERGSAVINERFKHLLQKMGQMFAHIDNQLLLVGHTDSLQYKGQDYAAFSNWSLSSNRA 236
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAI-VFLKGCRANT 160
A + S ++V P H + A NRR + L +A T
Sbjct: 237 MAARMQLLLGGMASNGILQVVGMADRAPLDARHPDA--ALNRRIELLVLTTGQAQT 290
>gi|163744356|ref|ZP_02151716.1| outer membrane porin, OmpA/MotB family protein [Oceanibulbus
indolifex HEL-45]
gi|161381174|gb|EDQ05583.1| outer membrane porin, OmpA/MotB family protein [Oceanibulbus
indolifex HEL-45]
Length = 309
Score = 39.4 bits (90), Expect = 0.16, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 7/109 (6%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL----GSRNSSIALGLRR 105
+ F S + P ++L +G + + + I GH D + ++ L R
Sbjct: 198 ERSLFTRGSAEVTPKTRELLLAIGDVIAEQNQPVEIIGHTDAATFGANNGYTNWELSADR 257
Query: 106 AYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
A A +A GI+ +R M+V+ P D A A+NRR + L
Sbjct: 258 ANATRRTLMAAGINGARFMRVSGVADTQPINT-IDPLA-AENRRISIRL 304
>gi|217076142|ref|YP_002333858.1| chemotaxis protein MotB, putative [Thermosipho africanus TCF52B]
gi|217035995|gb|ACJ74517.1| chemotaxis protein MotB, putative [Thermosipho africanus TCF52B]
Length = 217
Score = 39.4 bits (90), Expect = 0.16, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 50/124 (40%), Gaps = 17/124 (13%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLG---------SWLEKHDCDFLIEGHADELGSR 95
+ + + + F+ + Y++ +L + E + +F +EG++D G+
Sbjct: 77 AIIINNDILFNYNDYTLSTKGKNILLKVIKTYLNVILKPEYETYIAEFYLEGNSDPTGTY 136
Query: 96 NSSIALGLRRAYAVFNYFVARGI-------SASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
+I L ++RA+ VF Y ++ V+ G P + + Y K+RR
Sbjct: 137 EYNIDLSMKRAFEVFKYLRENLDEIPYQELFFKKLVVSGKGYNNPIIENG-KINYTKSRR 195
Query: 149 AIVF 152
+
Sbjct: 196 VELK 199
>gi|325278790|ref|YP_004251332.1| OmpA/MotB domain-containing protein [Odoribacter splanchnicus DSM
20712]
gi|324310599|gb|ADY31152.1| OmpA/MotB domain protein [Odoribacter splanchnicus DSM 20712]
Length = 366
Score = 39.4 bits (90), Expect = 0.16, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 53/137 (38%), Gaps = 12/137 (8%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPA-DIQVLSNLGSWLEK 78
+ + K V+ E ++ V VFF +S IRP +V +
Sbjct: 232 NVPKEEPKEDPKPVVVPEKKTEKLQPIQVN--VFFKINSAVIRPEEAGKVDELAAYLQKN 289
Query: 79 HDCDFLIEGHAD-ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE-MPSVY 136
+ G+AD + G+ + L RRA AV + A+GI+A R+ S G P
Sbjct: 290 PAAQVTLTGYADVQTGNHRLNKTLSARRAQAVADALTAKGIAADRITADSQGDTVQPFA- 348
Query: 137 GHDEDAYAKNRRAIVFL 153
+ +N R + +
Sbjct: 349 --TPE---EN-RVTICI 359
>gi|229841583|ref|ZP_04461741.1| Outer membrane protein A precursor [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229694046|gb|EEO84094.1| Outer membrane protein A precursor [Yersinia pestis biovar
Orientalis str. PEXU2]
Length = 66
Score = 39.4 bits (90), Expect = 0.16, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 9/58 (15%)
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDE---------DAYAKNRRAIVFLKGCR 157
+ +Y V++GI A ++ G+ P + + A +RR + +KG +
Sbjct: 1 MRDYLVSKGIPADKITARGEGQANPVTGNTCDNVKPRAALIECLAPDRRVEIEVKGYK 58
>gi|158422249|ref|YP_001523541.1| flagellar motor protein [Azorhizobium caulinodans ORS 571]
gi|158329138|dbj|BAF86623.1| flagellar motor protein [Azorhizobium caulinodans ORS 571]
Length = 472
Score = 39.4 bits (90), Expect = 0.17, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 56/145 (38%), Gaps = 11/145 (7%)
Query: 17 SISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSNLG 73
+++ + + +++P ++ +E S+ D + F S ++ ++ +G
Sbjct: 329 AVAAVQSNLGSVAAPK--VDVRVTKEGIVLSLTDDINYSMFPVGSAVPDGRLVRAMAKIG 386
Query: 74 SWLEKHDCDFLIEGHADELGSR---NSSIALGLRRAYAVFNYFVARGISASRMK-VTSYG 129
L K + +I G+ D R + L RA+ + V G+ R+ + Y
Sbjct: 387 EALGKRPGEVVIRGYTDGRPYRSDTYDNWRLSTARAHMTYYMLVRGGLQEPRVAMIEGYA 446
Query: 130 KEMPSVYGHDEDAYAKNRRAIVFLK 154
E A+NRR + L+
Sbjct: 447 DRNL--KNKAEPYAAENRRIEILLR 469
>gi|146342457|ref|YP_001207505.1| hypothetical protein BRADO5616 [Bradyrhizobium sp. ORS278]
gi|146195263|emb|CAL79288.1| hypothetical protein; putative signal peptide [Bradyrhizobium sp.
ORS278]
Length = 411
Score = 39.4 bits (90), Expect = 0.17, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 33/99 (33%), Gaps = 2/99 (2%)
Query: 60 SIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY-FVARGI 118
+R + + + + GH G + L + RA V +
Sbjct: 311 EVRAPYQAWIGKIARRTAANHVCLEVAGHTSATGYSGVNDRLSVLRAAYVKDQILAEDKG 370
Query: 119 SASRMKVTSYGKEMPSV-YGHDEDAYAKNRRAIVFLKGC 156
A R+ + G V G D+ + A +RR + + C
Sbjct: 371 LAGRLIASGRGSREMIVGTGRDDPSDALDRRVELRIINC 409
>gi|288941479|ref|YP_003443719.1| OmpA/MotB domain-containing protein [Allochromatium vinosum DSM
180]
gi|288896851|gb|ADC62687.1| OmpA/MotB domain protein [Allochromatium vinosum DSM 180]
Length = 680
Score = 39.4 bits (90), Expect = 0.17, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 44/131 (33%), Gaps = 7/131 (5%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFL 84
+ ++ E + + + F S ++ + +L+ L++
Sbjct: 543 ESGLAALSIEVERLAPNHIRADLSRLIQFRDGSVALDESARTLLARFAGLLKEDERVRLH 602
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYA 144
I H D G+ ++ L RRA + GI ASR+ G P E+
Sbjct: 603 IVTHTDTQGATTNNQVLSERRAADIALILRLEGIGASRITHEGKGMSEPKFTR--EEERR 660
Query: 145 K----NRRAIV 151
NRR +
Sbjct: 661 LGPWINRRIEI 671
>gi|253996630|ref|YP_003048694.1| flagellar motor protein MotB [Methylotenera mobilis JLW8]
gi|253983309|gb|ACT48167.1| OmpA/MotB domain protein [Methylotenera mobilis JLW8]
Length = 312
Score = 39.4 bits (90), Expect = 0.17, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 44/127 (34%), Gaps = 20/127 (15%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD-----ELGSRNSS 98
+ F+++ ++P Q+L +G L + GH D S+
Sbjct: 164 QIVDEQNRPMFESAKAEMQPYAKQILKEIGQMLNGVTNKISLSGHTDAAPYSSGEKGYSN 223
Query: 99 IALGLRRAYAVFNYFVARGISASRM-KVTS------YGKEMPSVYGHDEDAYAKNRRAIV 151
L RA A +A G+ +++ +V + K+ P NRR +
Sbjct: 224 WELSSDRANASRRELIAGGMDEAKLLRVVGLSSVSLFDKDDPLNP--------INRRISI 275
Query: 152 FLKGCRA 158
+ +A
Sbjct: 276 IVMNKQA 282
>gi|146305660|ref|YP_001186125.1| flagellar motor protein MotB [Pseudomonas mendocina ymp]
gi|145573861|gb|ABP83393.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp]
Length = 329
Score = 39.4 bits (90), Expect = 0.17, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 40/131 (30%), Gaps = 14/131 (10%)
Query: 38 SSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
Q+ + D F S +++P +L + + I GH D
Sbjct: 148 EITQDGLRIQIVDAENRPMFALGSANLQPYFEDILLAMADTIRAVPNKISISGHTDAKPF 207
Query: 95 ----RNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGH--DEDAYAKNR 147
+ L RA A +A G + ++ +V Y + NR
Sbjct: 208 VGRGDFGNWELSANRANAARRALIAGGYADEQVARVVGYASSALFDRNDPFNPV----NR 263
Query: 148 RAIVFLKGCRA 158
R + + +A
Sbjct: 264 RIDIVVLTKKA 274
>gi|258592514|emb|CBE68823.1| Outer membrane protein, OmpA/MotB family [NC10 bacterium 'Dutch
sediment']
Length = 308
Score = 39.4 bits (90), Expect = 0.18, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 41/116 (35%), Gaps = 15/116 (12%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS------RNSSIALG 102
FFD S ++P Q+L+ + + K ++EGH D S+ L
Sbjct: 169 NRDSFFDLGSSRLKPVTRQLLAAIAHEVAKLPNQVVVEGHTDARPYSGNTGRDYSNWELS 228
Query: 103 LRRAYAVFNYFVARGISASRMK-VTSYGK---EMPSVYGHDEDAYAKNRRAIVFLK 154
RA + G+ +++ V Y P+ NRR + ++
Sbjct: 229 TDRANSARRTMEEVGLRRNQVSRVIGYADQHLFNPTDPLDTA-----NRRISILVR 279
>gi|253563059|ref|ZP_04840516.1| outer membrane porin F [Bacteroides sp. 3_2_5]
gi|251946835|gb|EES87117.1| outer membrane porin F [Bacteroides sp. 3_2_5]
Length = 373
Score = 39.4 bits (90), Expect = 0.18, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 48/116 (41%), Gaps = 2/116 (1%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
+S + D D K + + + ++ + +VFF I + +
Sbjct: 240 LSKAQSDLADAKNALANVKPVTKEVVKEIEVAGPRAVFFQIGKSKIDDYGMVNIQLAAKI 299
Query: 76 LE-KHDCDFLIEGHAD-ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
L+ D + I G+AD GS + L RA AV++ + G+S ++++ +G
Sbjct: 300 LKANPDKKYKIAGYADKATGSAKWNQKLSEARAQAVYDALIKEGVSKDQLELVGFG 355
>gi|330821029|ref|YP_004349891.1| OmpA/MotB [Burkholderia gladioli BSR3]
gi|327373024|gb|AEA64379.1| OmpA/MotB [Burkholderia gladioli BSR3]
Length = 307
Score = 39.4 bits (90), Expect = 0.18, Method: Composition-based stats.
Identities = 28/150 (18%), Positives = 55/150 (36%), Gaps = 11/150 (7%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGS 74
+S + + ++ + + S+ +E + D F T S + +L +G+
Sbjct: 137 LSTLVEENPQLRAFKDQIRLSTTREGLRIEIVDSRSRPMFATGSARLEDYASDILFRIGT 196
Query: 75 WLEKHDCDFLIEGHADELGSR-----NSSIALGLRRAYAVFNYFVARGISASRM-KVTSY 128
L + D I GH D + S+ L RA A VA + ++ ++
Sbjct: 197 LLNQVDNRVSIAGHTDAVPYSGGIAGYSNWELSSDRANAARRALVAGHLREDKLLQIRGL 256
Query: 129 GKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
+P G + NRR + + +A
Sbjct: 257 ADVLPLDQGAADA--EVNRRISILVLNKQA 284
>gi|301162664|emb|CBW22211.1| putative outer membrane protein [Bacteroides fragilis 638R]
Length = 366
Score = 39.4 bits (90), Expect = 0.18, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 48/116 (41%), Gaps = 2/116 (1%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
+S + D D K + + + ++ + +VFF I + +
Sbjct: 233 LSKAQSDLADAKNALANVKPVTKEVVKEIEVAGPRAVFFQIGKSKIDDYGMVNIQLAAKI 292
Query: 76 LE-KHDCDFLIEGHAD-ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
L+ D + I G+AD GS + L RA AV++ + G+S ++++ +G
Sbjct: 293 LKANPDKKYKIAGYADKATGSAKWNQKLSEARAQAVYDALIKEGVSKDQLELVGFG 348
>gi|16080313|ref|NP_391140.1| fructose amino acid-binding lipoprotein [Bacillus subtilis subsp.
subtilis str. 168]
gi|221311204|ref|ZP_03593051.1| hypothetical protein Bsubs1_17686 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221315531|ref|ZP_03597336.1| hypothetical protein BsubsN3_17602 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221320446|ref|ZP_03601740.1| hypothetical protein BsubsJ_17565 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221324730|ref|ZP_03606024.1| hypothetical protein BsubsS_17716 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|3915566|sp|O32156|YURO_BACSU RecName: Full=Uncharacterized ABC transporter extracellular-binding
protein yurO; Flags: Precursor
gi|2635757|emb|CAB15250.1| putative fructose amino acid-binding lipoprotein [Bacillus subtilis
subsp. subtilis str. 168]
Length = 422
Score = 39.4 bits (90), Expect = 0.18, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 37/111 (33%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ +F+I++A++M++I+G + + T+ ++ S + V +
Sbjct: 1 MKKMLLFLIIAAVSMLTIAGCSSQSSSADGKVTLKFFHRWPKEPEKSYFEEVVKEFEKDH 60
Query: 61 IRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
S+ +K D S + A R +
Sbjct: 61 PDIDIQIEAVLNDSYKDKIKVMLGTTSPPDIYFSWSDEFAFKFIRGNKALD 111
>gi|317491635|ref|ZP_07950071.1| OmpA family protein [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316921182|gb|EFV42505.1| OmpA family protein [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 329
Score = 39.4 bits (90), Expect = 0.18, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F+ S + P +L + L + GH D+L S+
Sbjct: 150 QIIDSQNRPMFENGSARVEPYMRDILRAIAPILNDVPNKISLSGHTDDLPYASGERGYSN 209
Query: 99 IALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A +A G++ ++ +V M + A NRR + +
Sbjct: 210 WELSADRANASRRELIAGGLAEGKILRVVGMADTMSLKSQTSDA--AINRRISILVLNKS 267
Query: 158 A 158
A
Sbjct: 268 A 268
>gi|264676590|ref|YP_003276496.1| OmpA/MotB [Comamonas testosteroni CNB-2]
gi|262207102|gb|ACY31200.1| OmpA/MotB [Comamonas testosteroni CNB-2]
Length = 355
Score = 39.4 bits (90), Expect = 0.18, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 42/116 (36%), Gaps = 8/116 (6%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSSIALGL 103
+ FD+ S ++P +L +G+ + + + GH D S+ L
Sbjct: 168 QNRPMFDSGSAVVKPYMRDILREIGAAMGNAENRISLSGHTDAAPYGNADRGYSNWELSA 227
Query: 104 RRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
RA A VA G+ ++ +V + A+NRR + + A
Sbjct: 228 DRANASRRELVAAGMPLDKLARVVGMASSDLLLPEEPRA--AQNRRITITVLTKEA 281
>gi|325954884|ref|YP_004238544.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
gi|323437502|gb|ADX67966.1| OmpA/MotB domain protein [Weeksella virosa DSM 16922]
Length = 439
Score = 39.4 bits (90), Expect = 0.19, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 42/101 (41%), Gaps = 3/101 (2%)
Query: 50 DSVFFDTSS-YSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
D+V F+ +S + + L NL + + + I ++D+ G N + + +RA
Sbjct: 331 DNVNFEFNSTDQLEAGSHEQLENLAAILKKFPESKIKIGAYSDKKGDDNINKEVSQKRAD 390
Query: 108 AVFNYFVARGISASRMKVTSYGKEMPSVY-GHDEDAYAKNR 147
+ G+ + YG+E +V ++ A +R
Sbjct: 391 FLKTELGKLGVGEQVVSAEGYGEEFATVPETASDEERAVDR 431
>gi|288925106|ref|ZP_06419042.1| lipoprotein PG3 [Prevotella buccae D17]
gi|288338296|gb|EFC76646.1| lipoprotein PG3 [Prevotella buccae D17]
Length = 238
Score = 39.4 bits (90), Expect = 0.19, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 49/121 (40%), Gaps = 5/121 (4%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK-HDCDFLIEGHADELG 93
+ +++ + + + F + ++ + L+ + L+ I+G+ D G
Sbjct: 105 VTDANGLKAVKVTFDSGLLFPLNKSTLSASSKTELAKFATVLKNDPQLAVDIQGYTDRTG 164
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+I L RA +V +Y +G+ +S K VT +G + NRR V+
Sbjct: 165 GDKINIPLSQSRAESVASYLRKQGVGSSSFKNVTGFGSANEI---ENAAISQVNRRVEVY 221
Query: 153 L 153
L
Sbjct: 222 L 222
>gi|207111044|ref|ZP_03245206.1| peptidoglycan associated lipoprotein precursor (omp18)
[Helicobacter pylori HPKX_438_CA4C1]
Length = 34
Score = 39.4 bits (90), Expect = 0.19, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 122 RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+K S+G+ P + Y +NRR V L
Sbjct: 1 MIKTISFGETKPKCAQKTRECYKENRRVDVKL 32
>gi|53712963|ref|YP_098955.1| outer membrane porin F [Bacteroides fragilis YCH46]
gi|52215828|dbj|BAD48421.1| outer membrane porin F precursor [Bacteroides fragilis YCH46]
Length = 373
Score = 39.4 bits (90), Expect = 0.19, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 48/116 (41%), Gaps = 2/116 (1%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
+S + D D K + + + ++ + +VFF I + +
Sbjct: 240 LSKAQSDLADAKNALANVKPVTKEVVKEIEVAGPRAVFFQIGKSKIDDYGMVNIQLAAKI 299
Query: 76 LE-KHDCDFLIEGHAD-ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
L+ D + I G+AD GS + L RA AV++ + G+S ++++ +G
Sbjct: 300 LKANPDKKYKIAGYADKATGSAKWNQKLSEARAQAVYDALIKEGVSKDQLELVGFG 355
>gi|85706953|ref|ZP_01038043.1| Outer membrane protein, OmpA/MotB family protein [Roseovarius sp.
217]
gi|85668564|gb|EAQ23435.1| Outer membrane protein, OmpA/MotB family protein [Roseovarius sp.
217]
Length = 630
Score = 39.0 bits (89), Expect = 0.19, Method: Composition-based stats.
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 9/120 (7%)
Query: 37 ESSLQEQFSSSVG-DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-----FLIEGHAD 90
E+ Q S + +V F T+S +I+P+ + L +G + + FLIEG+ D
Sbjct: 499 ETVEVRQMSPEINLQNVTFATASAAIQPSQAENLREMGVMMRDLIAEDPTELFLIEGYTD 558
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
+G+ ++ L RRA +V F M V YG+ + ++A NRR
Sbjct: 559 AVGAPGYNLLLSDRRAESVALAFSEYFDVPAENMVVQGYGESYLKIP--TQEAERLNRRV 616
>gi|238762341|ref|ZP_04623312.1| Lateral flagellar proton motor protein B [Yersinia kristensenii
ATCC 33638]
gi|238699326|gb|EEP92072.1| Lateral flagellar proton motor protein B [Yersinia kristensenii
ATCC 33638]
Length = 302
Score = 39.0 bits (89), Expect = 0.19, Method: Composition-based stats.
Identities = 27/141 (19%), Positives = 49/141 (34%), Gaps = 8/141 (5%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD 82
T + L + + + D F SS + P ++L+ L + D
Sbjct: 140 TSAYDAQSNLQMEVVPQGLRILIQDDKQRDMFQRSSAVLTPFFGRLLAELAPAFNEMDNK 199
Query: 83 FLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+I GH D ++ L RA V G++ R+ + + +
Sbjct: 200 IIITGHTDASRYRDQVMYNNWNLSGERALMAHKALVKGGLTEGRVLQINAMADQMLLDPA 259
Query: 139 DEDAYAKNRRAIVFLKGCRAN 159
+ A AKNRR + + A+
Sbjct: 260 EPLA-AKNRRIEIMVLTKTAS 279
>gi|299531265|ref|ZP_07044675.1| OmpA/MotB [Comamonas testosteroni S44]
gi|298720672|gb|EFI61619.1| OmpA/MotB [Comamonas testosteroni S44]
Length = 355
Score = 39.0 bits (89), Expect = 0.19, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 42/116 (36%), Gaps = 8/116 (6%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD-----ELGSRNSSIALGL 103
+ FD+ S ++P +L +G+ + + + GH D S+ L
Sbjct: 168 QNRPMFDSGSAVVKPYMRDILREIGAAMGNAENRISLSGHTDAAPYGNADRGYSNWELSA 227
Query: 104 RRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
RA A VA G+ ++ +V + A+NRR + + A
Sbjct: 228 DRANASRRELVAAGMPLDKLARVVGMASSDLLLPEEPRA--AQNRRITITVLTKEA 281
>gi|224824155|ref|ZP_03697263.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002]
gi|224603574|gb|EEG09749.1| OmpA/MotB domain protein [Lutiella nitroferrum 2002]
Length = 302
Score = 39.0 bits (89), Expect = 0.19, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 41/123 (33%), Gaps = 12/123 (9%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG-----SRNSS 98
+ FD+ S ++ P +L LG L I GH D S+
Sbjct: 148 QIVDEQNRPMFDSGSANLLPHTRTILQELGKELNGVANRLSISGHTDAKPFGGAQHGYSN 207
Query: 99 IALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGH--DEDAYAKNRRAIVFLKG 155
L RA A +A G+ ++ +V P + + + NRR + +
Sbjct: 208 WELSADRANAARRELLAGGLMHDKILRVVGLAAANPLIRSNVFSPE----NRRIAIVVLN 263
Query: 156 CRA 158
A
Sbjct: 264 KEA 266
>gi|265763060|ref|ZP_06091628.1| outer membrane porin F [Bacteroides sp. 2_1_16]
gi|263255668|gb|EEZ27014.1| outer membrane porin F [Bacteroides sp. 2_1_16]
Length = 373
Score = 39.0 bits (89), Expect = 0.19, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 48/116 (41%), Gaps = 2/116 (1%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
+S + D D K + + + ++ + +VFF I + +
Sbjct: 240 LSKAQSDLADAKNALANVKPVTKEVVKEIEVAGPRAVFFQIGKSKIDDYGMVNIQLAAKI 299
Query: 76 LE-KHDCDFLIEGHAD-ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
L+ D + I G+AD GS + L RA AV++ + G+S ++++ +G
Sbjct: 300 LKANPDKKYKIAGYADKATGSAKWNQKLSEARAQAVYDALIKEGVSKDQLELVGFG 355
>gi|281425148|ref|ZP_06256061.1| hypothetical protein HMPREF0971_02114 [Prevotella oris F0302]
gi|281400740|gb|EFB31571.1| hypothetical protein HMPREF0971_02114 [Prevotella oris F0302]
Length = 190
Score = 39.0 bits (89), Expect = 0.20, Method: Composition-based stats.
Identities = 18/144 (12%), Positives = 48/144 (33%), Gaps = 9/144 (6%)
Query: 1 MQYST------IFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFF 54
M+ + + ++L+ ++ + S D+ + I+ + + + + +
Sbjct: 1 MKKTKGFMVWSLVLLLAGTSLTACSNDDDENAPITCIEPPIY-QVNDALWQKLIVGHGWK 59
Query: 55 DTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
SY++ + ++ + + AD + + S ALG + Y
Sbjct: 60 HVVSYAV--ENGKITNRNFYEDMIGISPHDLYFTADSVTTYFYSNALGGKPYQVTKAYTT 117
Query: 115 ARGISASRMKVTSYGKEMPSVYGH 138
R +V G+ P +
Sbjct: 118 RLSADGKRFEVYREGETQPLLSCD 141
>gi|302877353|ref|YP_003845917.1| OmpA/MotB domain-containing protein [Gallionella capsiferriformans
ES-2]
gi|302580142|gb|ADL54153.1| OmpA/MotB domain protein [Gallionella capsiferriformans ES-2]
Length = 295
Score = 39.0 bits (89), Expect = 0.20, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 47/121 (38%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F+ S ++P +++L ++GS L + + GH D + S+
Sbjct: 168 MIIDAKNRPMFEIGSAILQPYTVEILRSIGSTLNRVPNKIGLSGHTDAANYQGGSAGYSN 227
Query: 99 IALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A +A G+ ++ +V + DA+ NRR + + +
Sbjct: 228 WDLSADRANASRRTLIAGGMGQEKILRVVGLSDSVLFNPADPYDAH--NRRISIIVMNQK 285
Query: 158 A 158
A
Sbjct: 286 A 286
>gi|315608144|ref|ZP_07883136.1| lipoprotein PG3 [Prevotella buccae ATCC 33574]
gi|315250113|gb|EFU30110.1| lipoprotein PG3 [Prevotella buccae ATCC 33574]
Length = 238
Score = 39.0 bits (89), Expect = 0.20, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 49/121 (40%), Gaps = 5/121 (4%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK-HDCDFLIEGHADELG 93
+ +++ + + + F + ++ + L+ + L+ I+G+ D G
Sbjct: 105 VTDANGLKAVKVTFDSGLLFPLNKSTLSASSKTELAKFATVLKNDPQLAVDIQGYTDRTG 164
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+I L RA +V +Y +G+ +S K VT +G + NRR V+
Sbjct: 165 GDKINIPLSQSRAESVASYLRKQGVGSSSFKNVTGFGSANEI---ENAAVSQVNRRVEVY 221
Query: 153 L 153
L
Sbjct: 222 L 222
>gi|283785634|ref|YP_003365499.1| chemotaxis protein MotB (motility protein B) [Citrobacter rodentium
ICC168]
gi|282949088|emb|CBG88694.1| chemotaxis protein MotB (motility protein B) [Citrobacter rodentium
ICC168]
Length = 309
Score = 39.0 bits (89), Expect = 0.20, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 39/121 (32%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 152 QIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSN 211
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A V G+ + ++V M ED A NRR + + +
Sbjct: 212 WELSADRANASRRELVQGGLDDGKVLRVVGMAATMRLSDRGPED--AVNRRISLLVLNRQ 269
Query: 158 A 158
A
Sbjct: 270 A 270
>gi|237653884|ref|YP_002890198.1| OmpA/MotB domain protein [Thauera sp. MZ1T]
gi|237625131|gb|ACR01821.1| OmpA/MotB domain protein [Thauera sp. MZ1T]
Length = 330
Score = 39.0 bits (89), Expect = 0.20, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 41/119 (34%), Gaps = 8/119 (6%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSSIA 100
+ F ++S +RP ++L + + L D + GH D S+
Sbjct: 175 VDAQNRPMFTSASAELRPYTRELLREIAAALNDVDNRVSMSGHTDSAQYAGGERGFSNWE 234
Query: 101 LGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
L RA A VA G+ A ++V G D NRR + + A
Sbjct: 235 LSSNRANAARRELVAGGLEAGKMLRVVGLADTAHLNPGDPLD--PANRRISIVVLNRAA 291
>gi|156933520|ref|YP_001437436.1| flagellar motor protein MotB [Cronobacter sakazakii ATCC BAA-894]
gi|156531774|gb|ABU76600.1| hypothetical protein ESA_01340 [Cronobacter sakazakii ATCC BAA-894]
Length = 310
Score = 39.0 bits (89), Expect = 0.20, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 37/121 (30%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 153 QIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNGIPNKVSLSGHTDDFPYANGERGYSN 212
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A V G+ + ++V M A NRR + + +
Sbjct: 213 WELSADRANASRRELVIGGLDDGKVLRVVGMAATMRLA--EKGANEALNRRISLLVLNKQ 270
Query: 158 A 158
+
Sbjct: 271 S 271
>gi|152984447|ref|YP_001351357.1| flagellar motor protein [Pseudomonas aeruginosa PA7]
gi|150959605|gb|ABR81630.1| flagellar motor protein [Pseudomonas aeruginosa PA7]
Length = 254
Score = 39.0 bits (89), Expect = 0.20, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 123 MKVTSYGKEMPS-VYGHDEDAYAKNRRAIV 151
V+ YG+ P V ED + +NRR +
Sbjct: 201 FSVSGYGETRPVLVDQQTEDDFKRNRRIDI 230
>gi|302878239|ref|YP_003846803.1| OmpA/MotB domain-containing protein [Gallionella capsiferriformans
ES-2]
gi|302581028|gb|ADL55039.1| OmpA/MotB domain protein [Gallionella capsiferriformans ES-2]
Length = 328
Score = 39.0 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 41/127 (32%), Gaps = 20/127 (15%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F + + P ++L +G L I GH D S+
Sbjct: 167 QIVDEKNRPMFQSGRAQLEPYTREILHAIGQTLNDVPNKVSISGHTDASVYGGGGIGYSN 226
Query: 99 IALGLRRAYAVFNYFVARGISASRM-KVTS------YGKEMPSVYGHDEDAYAKNRRAIV 151
L RA A +A G++ ++ +V + KE P NRR +
Sbjct: 227 WELSADRANASRRELIAGGMADEKIVRVVGLSSAVLFKKEDPLSPT--------NRRISL 278
Query: 152 FLKGCRA 158
+ +A
Sbjct: 279 IIMNKKA 285
>gi|170723854|ref|YP_001751542.1| flagellar motor protein MotB [Pseudomonas putida W619]
gi|169761857|gb|ACA75173.1| OmpA/MotB domain protein [Pseudomonas putida W619]
Length = 339
Score = 39.0 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 45/142 (31%), Gaps = 10/142 (7%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ ++ + Q+ + D FD S ++P +L + ++
Sbjct: 136 NPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDIGSARLQPYFEDILLAMADTIKAVPN 195
Query: 82 DFLIEGHAD----ELGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVY 136
+ GH D S + L RA A VA G ++ +V Y
Sbjct: 196 KISVSGHTDAKPYSGSSEFGNWELSANRANAARRALVAGGYPDDQVARVVGYASSS-LFD 254
Query: 137 GHDEDAYAKNRRAIVFLKGCRA 158
D NRR + + +A
Sbjct: 255 RKDPFN-PVNRRIDIIVLTKKA 275
>gi|238793598|ref|ZP_04637221.1| Lateral flagellar proton motor protein B [Yersinia intermedia ATCC
29909]
gi|238727013|gb|EEQ18544.1| Lateral flagellar proton motor protein B [Yersinia intermedia ATCC
29909]
Length = 255
Score = 39.0 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 50/141 (35%), Gaps = 8/141 (5%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD 82
T + L + + + D F SS + P ++L+ L + D
Sbjct: 93 TSAYDAQSNLQMEVVPQGLRILIQDDKQRDMFQRSSAVLTPFFNRLLAELAPAFNEMDNK 152
Query: 83 FLIEGHADELGSR----NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+I GH D R ++ L RA V G+S R+ + + +
Sbjct: 153 IIITGHTDASRYRDQVLYNNWNLSGERALMAHKALVKGGLSEGRVLQINAMADQMLLDPA 212
Query: 139 DEDAYAKNRRAIVFLKGCRAN 159
+ A AKNRR + + A+
Sbjct: 213 EPLA-AKNRRIEIMVLTKTAS 232
>gi|331003469|ref|ZP_08326968.1| hypothetical protein HMPREF0491_01830 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330412515|gb|EGG91904.1| hypothetical protein HMPREF0491_01830 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 176
Score = 39.0 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 15/118 (12%), Positives = 31/118 (26%), Gaps = 1/118 (0%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFS-SSVGDSVFFDTSSY 59
M+ I + + ++ +SG S E + +SV D ++ +
Sbjct: 1 MKKLKIVLTIVICMLLFLSGCAGAKASKESNQDKKQEKDALTGTAWTSVDDDSYWIFNED 60
Query: 60 SIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG 117
++ + E D + SS + V N
Sbjct: 61 HSFFWYQDRDEKDDNYYGGVYKLYRGEAAMDFIEKELSSYNVTKSGLMEVINKTDRYM 118
>gi|332162880|ref|YP_004299457.1| flagellar motor protein MotB [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|318604276|emb|CBY25774.1| flagellar motor rotation protein MotB [Yersinia enterocolitica
subsp. palearctica Y11]
gi|325667110|gb|ADZ43754.1| Flagellar motor protein MotB [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330863328|emb|CBX73451.1| putative protein mbhA [Yersinia enterocolitica W22703]
Length = 272
Score = 39.0 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 49/141 (34%), Gaps = 8/141 (5%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD 82
T + L + + + D F SS + P ++L+ L + D
Sbjct: 110 TSAYDAQSNLKMEVVPQGLRILIQDDKHRDMFQRSSAVLTPFFSRLLAELAPAFNEMDNK 169
Query: 83 FLIEGHADELGSR----NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+I GH D R ++ L RA V G+ R+ + E +
Sbjct: 170 IIITGHTDASRYRDQVLYNNWNLSGERALMAHKALVKGGLDDDRVLQINAMAEQMLLDSA 229
Query: 139 DEDAYAKNRRAIVFLKGCRAN 159
+ A AKNRR + + A+
Sbjct: 230 EPLA-AKNRRIEIMVLTKTAS 249
>gi|158327337|emb|CAM82843.1| flagellar motor protein MotB [Yersinia enterocolitica W22703]
Length = 302
Score = 39.0 bits (89), Expect = 0.22, Method: Composition-based stats.
Identities = 29/141 (20%), Positives = 49/141 (34%), Gaps = 8/141 (5%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD 82
T + L + + + D F SS + P ++L+ L + D
Sbjct: 140 TSAYDAQSNLKMEVVPQGLRILIQDDKHRDMFQRSSAVLTPFFSRLLAELAPAFNEMDNK 199
Query: 83 FLIEGHADELGSR----NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+I GH D R ++ L RA V G+ R+ + E +
Sbjct: 200 IIITGHTDASRYRDQVLYNNWNLSGERALMAHKALVKGGLDDDRVLQINAMAEQMLLDSA 259
Query: 139 DEDAYAKNRRAIVFLKGCRAN 159
+ A AKNRR + + A+
Sbjct: 260 EPLA-AKNRRIEIMVLTKTAS 279
>gi|149184216|ref|ZP_01862534.1| OmpA/MotB [Erythrobacter sp. SD-21]
gi|148831536|gb|EDL49969.1| OmpA/MotB [Erythrobacter sp. SD-21]
Length = 276
Score = 39.0 bits (89), Expect = 0.22, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 40/113 (35%), Gaps = 7/113 (6%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADE----LGSRNSSIALGLR 104
+ F + + ++L + + L + GH D SR ++ +L
Sbjct: 166 ANFSMFSLGTTVLTNDARELLVVIAAALAPEGGKITVRGHTDALRYRYPSRVNNWSLSAG 225
Query: 105 RAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
RA + GI+ R + + P + G + +NRR + L+
Sbjct: 226 RAEETRQTLIREGINQERFRRIEGVAATEPLI-GDNPSD-PRNRRISISLEDS 276
>gi|146305234|ref|YP_001185699.1| OmpA/MotB domain-containing protein [Pseudomonas mendocina ymp]
gi|145573435|gb|ABP82967.1| OmpA/MotB domain protein [Pseudomonas mendocina ymp]
Length = 313
Score = 39.0 bits (89), Expect = 0.22, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 51/138 (36%), Gaps = 11/138 (7%)
Query: 30 SPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIE 86
+ + + + + D F S + P ++L L L K D +I
Sbjct: 149 DAEANIEVQVVPQGLRILIKDDAQRFMFSRGSARLDPHFEKLLQRLAGILAKVDNHLIIS 208
Query: 87 GHADELGSR-----NSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDE 140
GH D R ++ L RA N V G +++ ++VT+ MP + +
Sbjct: 209 GHTDSTPYRGVVGGYNNWNLSGDRALRARNVLVEAGLPTSAVLQVTAQADGMPLLPSDPQ 268
Query: 141 DAYAKNRRAIVFLKGCRA 158
+ NRR + L +A
Sbjct: 269 NG--ANRRIELLLLTSQA 284
>gi|260598378|ref|YP_003210949.1| flagellar motor protein MotB [Cronobacter turicensis z3032]
gi|260217555|emb|CBA31774.1| Chemotaxis protein motB [Cronobacter turicensis z3032]
Length = 310
Score = 39.0 bits (89), Expect = 0.23, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 37/121 (30%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 153 QIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNGIPNKVSLSGHTDDFPYANGERGYSN 212
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA + V G+ + ++V M A NRR + + +
Sbjct: 213 WELSADRANSSRRELVIGGLDDGKVLRVVGMAATMRLA--EKGANEALNRRISLLVLNKQ 270
Query: 158 A 158
+
Sbjct: 271 S 271
>gi|254441967|ref|ZP_05055453.1| hypothetical protein OA307_12 [Octadecabacter antarcticus 307]
gi|198250589|gb|EDY74911.1| hypothetical protein OA307_12 [Octadecabacter antarcticus 307]
Length = 50
Score = 39.0 bits (89), Expect = 0.23, Method: Composition-based stats.
Identities = 5/44 (11%), Positives = 14/44 (31%)
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ ++G+ +P NRR ++++
Sbjct: 4 RALGGTFPENVEIDTAAFGEALPMACDDTIWGQQTNRRVELWVR 47
>gi|294853085|ref|ZP_06793757.1| predicted protein [Brucella sp. NVSL 07-0026]
gi|294818740|gb|EFG35740.1| predicted protein [Brucella sp. NVSL 07-0026]
Length = 78
Score = 39.0 bits (89), Expect = 0.23, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 26/79 (32%), Gaps = 8/79 (10%)
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ G D + RA A++N+ + +G+ ASR+ + P
Sbjct: 1 MPKHINVRGLTDNNCPPPGDTQVARVRALAIYNWLINQGVPASRITI----SYAPVKDYA 56
Query: 139 DED----AYAKNRRAIVFL 153
NRR + +
Sbjct: 57 SNAPLSPGRVLNRRVDIEI 75
>gi|257126467|ref|YP_003164581.1| hypothetical protein Lebu_1722 [Leptotrichia buccalis C-1013-b]
gi|257050406|gb|ACV39590.1| hypothetical protein Lebu_1722 [Leptotrichia buccalis C-1013-b]
Length = 197
Score = 39.0 bits (89), Expect = 0.23, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 11/30 (36%)
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+KV G E S + NRR +
Sbjct: 144 VKVLGKGSENSSDTNDTVEGRYNNRRVEII 173
>gi|126735562|ref|ZP_01751307.1| Outer membrane protein, OmpA/MotB family [Roseobacter sp. CCS2]
gi|126714749|gb|EBA11615.1| Outer membrane protein, OmpA/MotB family [Roseobacter sp. CCS2]
Length = 599
Score = 39.0 bits (89), Expect = 0.23, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 8/108 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-----FLIEGHADELGSRNSSIALGLR 104
D++ F T+S +I+P+ + L+NL + D FLIEGH D +G + ++AL R
Sbjct: 486 DTITFATASAAIQPSQAEELTNLAVAISNIIEDDPRQVFLIEGHTDAVGDASYNLALSDR 545
Query: 105 RAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
RA V + YG+ V + NRRA +
Sbjct: 546 RAETVALAMTEYFDIPPENLITQGYGESALKVSTPGPE--RANRRASI 591
>gi|296101766|ref|YP_003611912.1| flagellar motor protein MotB [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295056225|gb|ADF60963.1| flagellar motor protein MotB [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 309
Score = 39.0 bits (89), Expect = 0.23, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS-----RNSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 152 QIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYATGEKGYSN 211
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A VA G+ + ++V M +D A NRR + + +
Sbjct: 212 WELSADRANASRRELVAGGLDDGKVLRVVGMAATMRVSDRGPDD--AINRRISLLVLNQQ 269
Query: 158 A 158
A
Sbjct: 270 A 270
>gi|260363440|ref|ZP_05776286.1| outer membrane protein [Vibrio parahaemolyticus K5030]
gi|308113738|gb|EFO51278.1| outer membrane protein [Vibrio parahaemolyticus K5030]
Length = 166
Score = 39.0 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 29/163 (17%), Positives = 55/163 (33%), Gaps = 31/163 (19%)
Query: 1 MQYSTIFIILSAITMMSIS-------------GIDNLDTKISSPDTVLNESSLQEQF--- 44
M+ + + LS I + + D + D V+N L
Sbjct: 1 MKPMKLLLALSVIAVTQQAIAEDEYDYRAFPTAEQIADLQDEDNDGVINARDLCPGTPAG 60
Query: 45 --------------SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHA 89
S + V F S I P + + L +L+ + ++G+A
Sbjct: 61 SEVDNDGCGEYIKASEKMQVRVLFANDSDEINPVFRRQIRELSDFLKDYPTTSIELQGYA 120
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
+ G + L RRA V + ++ GI +R+++ +G
Sbjct: 121 SKTGGSKHNQDLSERRAKNVRDALLSYGIEPNRVRIIGFGDTH 163
>gi|262273510|ref|ZP_06051324.1| Flagellar motor rotation protein MotB [Grimontia hollisae CIP
101886]
gi|262222488|gb|EEY73799.1| Flagellar motor rotation protein MotB [Grimontia hollisae CIP
101886]
Length = 340
Score = 39.0 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 38/114 (33%), Gaps = 4/114 (3%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR---NSSIALGLRR 105
+V F S + P +L L L K +I GH D S+ L R
Sbjct: 182 KRNVMFQRGSAQMTPFFEDILYALSPKLGKIQNRLIISGHTDSTVFSTQAYSNWELSGDR 241
Query: 106 AYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
A V G+ ++ + + D + KNRR + + A+
Sbjct: 242 ALKARQVMVGSGLPQQQVLQVVAMADRTLLDEADPQS-GKNRRIEIMVLTKEAD 294
>gi|330807221|ref|YP_004351683.1| Chemotaxis protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327375329|gb|AEA66679.1| Chemotaxis protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 344
Score = 39.0 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 37/114 (32%), Gaps = 7/114 (6%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSIALGLRR 105
+ FD+ S ++P +L + ++ I GH D + L R
Sbjct: 163 NRPMFDSGSARLKPYFEDILLAMADTIKAVPNKISISGHTDAKPYVGKGDFGNWELSANR 222
Query: 106 AYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
A A VA ++ +V Y D NRR + + +A
Sbjct: 223 ANAARRALVAGSYPDEQVARVVGYASSA-LFDRKDPFN-PVNRRIDIVVLTKKA 274
>gi|15964427|ref|NP_384780.1| flagellar motor protein MotB [Sinorhizobium meliloti 1021]
gi|307311569|ref|ZP_07591210.1| OmpA/MotB domain protein [Sinorhizobium meliloti BL225C]
gi|15073604|emb|CAC45246.1| Chemotaxis (motility protein B) transmembrane [Sinorhizobium
meliloti 1021]
gi|306899586|gb|EFN30215.1| OmpA/MotB domain protein [Sinorhizobium meliloti BL225C]
Length = 394
Score = 39.0 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 42/114 (36%), Gaps = 8/114 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR---NSSIALGLRRA 106
D+ F S + + + +G L + + GH D + + L RA
Sbjct: 284 DAPMFAVGSAVPQKELVLAMEKIGRLLAERPGAVAVRGHTDGRPFKDGTYDNWRLSAARA 343
Query: 107 YAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYA-KNRRAIVFLKGCRA 158
+ + V G+ R+ +++ + V AYA NRR + L+ +
Sbjct: 344 QSAYYMLVRGGLEEERVKQISGFADRRLQVPND---AYAPANRRIEILLQSGQG 394
>gi|291278841|ref|YP_003495676.1| hypothetical protein DEFDS_0426 [Deferribacter desulfuricans SSM1]
gi|290753543|dbj|BAI79920.1| hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 200
Score = 39.0 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 23/72 (31%), Gaps = 6/72 (8%)
Query: 85 IEGHADE-----LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
I GH D ++ L + RA + S K+ +G P V
Sbjct: 126 IYGHTDSLPVKPNNKYRNNYELSILRAEFIKELIRKYSGIDSNAKIVGFGAFFPLVSNG- 184
Query: 140 EDAYAKNRRAIV 151
KNRR +
Sbjct: 185 LQGAEKNRRVEL 196
>gi|167567201|ref|ZP_02360117.1| Chemotaxis lafU protein [Burkholderia oklahomensis EO147]
Length = 303
Score = 39.0 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 52/150 (34%), Gaps = 11/150 (7%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSNLGS 74
++ + D ++ + + ++ DS F S + +L L
Sbjct: 120 LAARIRAEANALGMDGNVDVAINDDGVRVTIHDSSEKGMFARRSDVLDLQFDALLKALAP 179
Query: 75 WLEKHDCDFLIEGHADELGS-----RNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSY 128
L +I GH D +++ +L RRA + G +V+
Sbjct: 180 VLSSVTNKLVIVGHTDATQYAGASVFSNNWSLSSRRALRARQALIDGGLGEPQLFQVSGM 239
Query: 129 GKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
G +P+V D+ + NRR + L +A
Sbjct: 240 GDSIPAVP--DDPRHDVNRRVELLLLTSQA 267
>gi|225164037|ref|ZP_03726322.1| OmpA/MotB domain protein [Opitutaceae bacterium TAV2]
gi|224801343|gb|EEG19654.1| OmpA/MotB domain protein [Opitutaceae bacterium TAV2]
Length = 253
Score = 39.0 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 48/144 (33%), Gaps = 11/144 (7%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL 84
+++ +P + S F + V+ NL +++
Sbjct: 110 ESRTDNPIDIQVTSDGLRVILYDRNGRPLFVDRGTELTEWGRFVMDNLAWLIDRDHFYVT 169
Query: 85 IEGHA------DELGSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYG 137
IEGH D+ S + L RA A +S + ++ V Y P +
Sbjct: 170 IEGHTRAGLTLDDRPSSYTLWELSADRANASRRALTEHVVSPALIERVVGYADTRPLLDT 229
Query: 138 H-DEDAYAKNRRAIVFLKGCRANT 160
++ N+R + L+ R +T
Sbjct: 230 DATSES---NQRVTLSLRLPRKHT 250
>gi|167574625|ref|ZP_02367499.1| Chemotaxis lafU protein [Burkholderia oklahomensis C6786]
Length = 303
Score = 39.0 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 52/150 (34%), Gaps = 11/150 (7%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSNLGS 74
++ + D ++ + + ++ DS F S + +L L
Sbjct: 120 LAARIRAEANALGMDGNVDVAINDDGVRVTIHDSSEKGMFARRSDVLDLQFDALLKALAP 179
Query: 75 WLEKHDCDFLIEGHADELGS-----RNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSY 128
L +I GH D +++ +L RRA + G +V+
Sbjct: 180 VLSSVTNKLVIVGHTDATQYAGASVFSNNWSLSSRRALRARQALIDGGLGEPQLFQVSGM 239
Query: 129 GKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
G +P+V D+ + NRR + L +A
Sbjct: 240 GDSIPAVP--DDPRHDVNRRVELLLLTSQA 267
>gi|311697110|gb|ADP99982.1| conserved hypothetical protein, secreted [marine bacterium HP15]
Length = 141
Score = 38.6 bits (88), Expect = 0.25, Method: Composition-based stats.
Identities = 14/69 (20%), Positives = 23/69 (33%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA 142
I G L L L RA + +Y VA G+S ++ + +
Sbjct: 65 VTINGRTSTLRPSKRDERLALARAVSARDYLVAHGVSPLKIMINYVSAADFIADNGTPEG 124
Query: 143 YAKNRRAIV 151
N+R +
Sbjct: 125 RYLNQRVDI 133
>gi|238790287|ref|ZP_04634061.1| Lateral flagellar proton motor protein B [Yersinia frederiksenii
ATCC 33641]
gi|238721637|gb|EEQ13303.1| Lateral flagellar proton motor protein B [Yersinia frederiksenii
ATCC 33641]
Length = 241
Score = 38.6 bits (88), Expect = 0.25, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 43/127 (33%), Gaps = 19/127 (14%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR----NSSI 99
F SS + P ++L L + D +I GH D R ++
Sbjct: 100 LIQDDKQRDMFQRSSAVLTPFFSRLLGELAPAFNEMDNKIIITGHTDASRYRDQELYNNW 159
Query: 100 ALGLRRAYAVFNYFVARGISASR-MKVTSYG------KEMPSVYGHDEDAYAKNRRAIVF 152
L RA V G++ R +++ + G + P AKNRR +
Sbjct: 160 NLSGERALMAHKALVKGGLADGRVLQINAMGHQMLLHETEPLA--------AKNRRIEIM 211
Query: 153 LKGCRAN 159
+ A+
Sbjct: 212 ILTKTAS 218
>gi|60681175|ref|YP_211319.1| putative outer membrane protein [Bacteroides fragilis NCTC 9343]
gi|60492609|emb|CAH07381.1| putative outer membrane protein [Bacteroides fragilis NCTC 9343]
Length = 366
Score = 38.6 bits (88), Expect = 0.25, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 48/116 (41%), Gaps = 2/116 (1%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
+S + D D K + + + ++ + +VFF I + +
Sbjct: 233 LSKAQSDLADAKNALANVKPVTKEVVKEIEVAGPRAVFFQIGKSKIDDYGMVNIQLAAKI 292
Query: 76 LE-KHDCDFLIEGHAD-ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
L+ D + I G+AD GS + L RA AV++ + G+S ++++ +G
Sbjct: 293 LKANPDKKYKIAGYADKATGSAKWNQKLSEARAQAVYDALIKEGVSKDQLELIGFG 348
>gi|323224726|gb|EGA08995.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
Length = 309
Score = 38.6 bits (88), Expect = 0.25, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 152 QIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNGIPNRISLAGHTDDFPYANGEKGYSN 211
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A VA G+ + ++V M +D A NRR + + +
Sbjct: 212 WELSADRANASRRELVAGGLDNGKVLRVVGMAATMRLSDRGPDD--AINRRISLLVLNKQ 269
Query: 158 A 158
A
Sbjct: 270 A 270
>gi|77456741|ref|YP_346246.1| flagellar motor protein MotB [Pseudomonas fluorescens Pf0-1]
gi|77380744|gb|ABA72257.1| chemotaxis MotB protein [Pseudomonas fluorescens Pf0-1]
Length = 355
Score = 38.6 bits (88), Expect = 0.25, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 38/114 (33%), Gaps = 7/114 (6%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSIALGLRR 105
+ FD+ S ++P +L + ++ I GH D + L R
Sbjct: 163 NRPMFDSGSARLKPYFEDILLAMADTIKAVPNKISISGHTDAKPYVGNGDFGNWELSANR 222
Query: 106 AYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
A A VA S++ +V Y + NRR + + +A
Sbjct: 223 ANAARRALVAGSYPDSQVARVVGYASSA-LFDKENPFN-PVNRRIDIVVLTKKA 274
>gi|70734060|ref|YP_257700.1| flagellar motor protein MotB [Pseudomonas fluorescens Pf-5]
gi|68348359|gb|AAY95965.1| motility protein, MotB family [Pseudomonas fluorescens Pf-5]
Length = 372
Score = 38.6 bits (88), Expect = 0.25, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 44/142 (30%), Gaps = 10/142 (7%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ ++ + + + D FD+ S ++P +L + ++
Sbjct: 135 NPQLQKFKDQILFEITPDGLRIQIMDAENRPMFDSGSARLKPYFEDILLAMADTIKTVPN 194
Query: 82 DFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVY 136
I GH D + L RA A VA G ++ +V +
Sbjct: 195 KISISGHTDAKPYSGTGDFGNWELSANRANAARRALVAGGYPDPQVARVVGFASSA-LFD 253
Query: 137 GHDEDAYAKNRRAIVFLKGCRA 158
D NRR + + +A
Sbjct: 254 RKDPFN-PVNRRIDIVVLTKKA 274
>gi|326940021|gb|AEA15917.1| peptidylprolyl isomerase [Bacillus thuringiensis serovar
chinensis CT-43]
Length = 283
Score = 38.6 bits (88), Expect = 0.26, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 1 MQYSTIFI-ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFD 55
M+ IFI + + M+++S + D ++S + E L ++ G+S +
Sbjct: 1 MKKKKIFIGTIISCVMLALSACGSSDNVVTSKVGNVTEKELSKELRQQYGESTLYQ 56
>gi|218233359|ref|YP_002367018.1| peptidylprolyl isomerase [Bacillus cereus B4264]
gi|296502878|ref|YP_003664578.1| peptidylprolyl isomerase [Bacillus thuringiensis BMB171]
gi|218161316|gb|ACK61308.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus B4264]
gi|296323930|gb|ADH06858.1| peptidylprolyl isomerase [Bacillus thuringiensis BMB171]
Length = 283
Score = 38.6 bits (88), Expect = 0.26, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 1 MQYSTIFI-ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFD 55
M+ IFI + + M+++S + D ++S + E L ++ G+S +
Sbjct: 1 MKKKKIFIGTIISCVMLALSACGSSDNVVTSKVGNVTEKELSKELRQQYGESTLYQ 56
>gi|30020404|ref|NP_832035.1| peptidylprolyl isomerase [Bacillus cereus ATCC 14579]
gi|46396824|sp|Q81DT1|PRSA3_BACCR RecName: Full=Foldase protein prsA 3; Flags: Precursor
gi|29895955|gb|AAP09236.1| Protein export protein prsA precursor [Bacillus cereus ATCC
14579]
Length = 283
Score = 38.6 bits (88), Expect = 0.26, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 1 MQYSTIFI-ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFD 55
M+ IFI + + M+++S + D ++S + E L ++ G+S +
Sbjct: 1 MKKKKIFIGTIISCVMLALSACGSSDNVVTSKVGNVTEKELSKELRQQYGESTLYQ 56
>gi|307726644|ref|YP_003909857.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003]
gi|307587169|gb|ADN60566.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003]
Length = 357
Score = 38.6 bits (88), Expect = 0.26, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 40/103 (38%), Gaps = 9/103 (8%)
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
+ ++ PA + L + L+ + I G+ D LG + L L+RA V Y
Sbjct: 249 NDAAMLPAGRRELDEVARSLKTVSALRELAITGYTDRLGENAHNQRLSLQRAQTVARYLR 308
Query: 115 ARGISASRMKVTSYGKEMPSVYGH----DEDAY--AKNRRAIV 151
A G+++ + V P DE A NRR +
Sbjct: 309 AHGVTSP-ISVRGLASAKPVTECRQTRRDELVRCLAPNRRVEI 350
>gi|186473029|ref|YP_001860371.1| OmpA/MotB domain-containing protein [Burkholderia phymatum STM815]
gi|184195361|gb|ACC73325.1| OmpA/MotB domain protein [Burkholderia phymatum STM815]
Length = 327
Score = 38.6 bits (88), Expect = 0.26, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 49/130 (37%), Gaps = 11/130 (8%)
Query: 38 SSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD---- 90
S E + D++ F T S ++ +++L+ +G+ L D I GH D
Sbjct: 162 SITNEGLRIEIVDTLKRPMFATGSSKLQSYAVEILTRIGAALNDVDNRISIAGHTDAVTY 221
Query: 91 -ELGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRR 148
+ S+ L RA A VA G+ ++ +V +P + NRR
Sbjct: 222 ANGPAGYSNWELSSERANAARRALVAGGMREDKLLQVRGLADVLPL--NANVADEPTNRR 279
Query: 149 AIVFLKGCRA 158
V + A
Sbjct: 280 ISVLVLNKAA 289
>gi|254501723|ref|ZP_05113874.1| OmpA family protein [Labrenzia alexandrii DFL-11]
gi|222437794|gb|EEE44473.1| OmpA family protein [Labrenzia alexandrii DFL-11]
Length = 284
Score = 38.6 bits (88), Expect = 0.27, Method: Composition-based stats.
Identities = 23/152 (15%), Positives = 41/152 (26%), Gaps = 10/152 (6%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
A S+ +I+ T + +E + + D F S +
Sbjct: 123 FATAAASLRQAWQEMPEITEVSTNIILEETEEGLNIMLVDQDGRSMFREGSKYPYETTRR 182
Query: 68 VLSNLGSWLEKHDCDFLIEGHADE----LGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
+++ + L + I GH + + L RA G+ +
Sbjct: 183 LIAQMAPVLSRMPNRIEITGHTTAGAATVDPSYTGWDLSTERANVARQILSEYGVPDGQF 242
Query: 124 -KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
V P A NRR + L
Sbjct: 243 YSVVGKSDTEPLFPNDPYL--AANRRVGILLM 272
>gi|323135988|ref|ZP_08071071.1| OmpA/MotB domain protein [Methylocystis sp. ATCC 49242]
gi|322399079|gb|EFY01598.1| OmpA/MotB domain protein [Methylocystis sp. ATCC 49242]
Length = 341
Score = 38.6 bits (88), Expect = 0.27, Method: Composition-based stats.
Identities = 32/119 (26%), Positives = 47/119 (39%), Gaps = 7/119 (5%)
Query: 31 PDTVLNESSLQEQF-SSSVGDSVFFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGH 88
P L+ + Q + +V D V F S +I + L + D + GH
Sbjct: 221 PSGALDAAECQRALDAVAVVDRVEFREGSAAITRQAAEALDKAVALIRRCPDVTIEVRGH 280
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
AD+ + AL +RRA AV Y G+ R+ V +G + DA AK R
Sbjct: 281 ADD-----DNEALSVRRAQAVARYLRREGLGGRRVVVAGHGAHRARTAKAELDARAKFR 334
>gi|261344163|ref|ZP_05971807.1| chemotaxis MotB protein [Providencia rustigianii DSM 4541]
gi|282567758|gb|EFB73293.1| chemotaxis MotB protein [Providencia rustigianii DSM 4541]
Length = 306
Score = 38.6 bits (88), Expect = 0.27, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 37/116 (31%), Gaps = 9/116 (7%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ F S + P +L + L I GH D+L S+
Sbjct: 149 QIVDSANRPMFKVGSAIVEPYMRDILRAIAPLLNDVPNRISISGHTDDLPYASEAYYSNW 208
Query: 100 ALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYA-KNRRAIVFL 153
L RA A + G+ ++ +V + E+ A NRR + +
Sbjct: 209 ELSSDRANASRRELIMGGMEEQKILRVVGMASSIHLDK---ENGLAPINRRISIIV 261
>gi|2275156|gb|AAB81408.1| MotB [Sinorhizobium meliloti]
Length = 394
Score = 38.6 bits (88), Expect = 0.28, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 42/114 (36%), Gaps = 8/114 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR---NSSIALGLRRA 106
D+ F S + + + +G L + + GH D + + L RA
Sbjct: 284 DAPMFAVGSAVPQKELVLAMEKIGRLLAERPGAVAVRGHTDGRPFKDGTYDNWRLSAARA 343
Query: 107 YAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYA-KNRRAIVFLKGCRA 158
+ + V G+ R+ +++ + V AYA NRR + L+ +
Sbjct: 344 QSAYYMLVRGGLEEERVKQISGFADRRLQVPND---AYAPANRRIEILLQSGQG 394
>gi|307824077|ref|ZP_07654304.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
gi|307734861|gb|EFO05711.1| OmpA/MotB domain protein [Methylobacter tundripaludum SV96]
Length = 302
Score = 38.6 bits (88), Expect = 0.28, Method: Composition-based stats.
Identities = 17/120 (14%), Positives = 36/120 (30%), Gaps = 7/120 (5%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ + +S P +L L + + + GH D ++
Sbjct: 161 LIVDAQNRPMYKLASAETEPQIKLILRALAPVINELPNKVSLNGHTDARPFPPNQKKYTN 220
Query: 99 IALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A G++ ++ +V +P + NRR + + +
Sbjct: 221 WELSSDRANAARYELNQAGLAEEKILRVIGLSSSVPYSATAEPLD-PINRRISIIVMNKK 279
>gi|299141132|ref|ZP_07034269.1| lipoprotein [Prevotella oris C735]
gi|298577092|gb|EFI48961.1| lipoprotein [Prevotella oris C735]
Length = 190
Score = 38.6 bits (88), Expect = 0.28, Method: Composition-based stats.
Identities = 16/141 (11%), Positives = 41/141 (29%), Gaps = 3/141 (2%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS--- 57
M+ + F++ S + +++ + + + Q + ++ +
Sbjct: 1 MKKTKGFMVWSLVLLLAGTSLTACSNADDENAPITYIEPPIYQVNDALWQKLIVGHGWKH 60
Query: 58 SYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG 117
S + ++ + + AD + + S ALG Y
Sbjct: 61 VVSYAVENGKITNRNFYKDMIGISPHDLYFTADSVTTYFYSNALGGSPRKVTKAYTTRLS 120
Query: 118 ISASRMKVTSYGKEMPSVYGH 138
R +V G+ P +
Sbjct: 121 ADGKRFEVYREGETQPLLSCD 141
>gi|150395498|ref|YP_001325965.1| flagellar motor protein MotB [Sinorhizobium medicae WSM419]
gi|150027013|gb|ABR59130.1| OmpA/MotB domain protein [Sinorhizobium medicae WSM419]
Length = 397
Score = 38.6 bits (88), Expect = 0.28, Method: Composition-based stats.
Identities = 19/113 (16%), Positives = 39/113 (34%), Gaps = 6/113 (5%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR---NSSIALGLRRA 106
D+ F S + + + +G L + + GH D + + L RA
Sbjct: 287 DAPMFAVGSAVPQKELVLAMEKIGRLLAQRPGAVAVRGHTDGRPFKDGTYDNWRLSAARA 346
Query: 107 YAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
+ + V G+ R+ +++ + V NRR + L+ +
Sbjct: 347 QSAYYMLVRGGLKEERVKQISGFADRRLQVPNDPYA--PANRRIEILLQSGQG 397
>gi|326410244|gb|ADZ67308.1| TraQ protein [Brucella melitensis M28]
gi|326553537|gb|ADZ88176.1| TraQ protein [Brucella melitensis M5-90]
Length = 78
Score = 38.6 bits (88), Expect = 0.28, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 26/79 (32%), Gaps = 8/79 (10%)
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+ G D + RA A++N+ + +G+ ASR+ + P
Sbjct: 1 MPKHINVRGLTDNSCPPPGDTQVARVRALAIYNWLINQGVPASRITI----SYAPVKDYA 56
Query: 139 DED----AYAKNRRAIVFL 153
NRR + +
Sbjct: 57 SNAPLSPGRVLNRRVDIEI 75
>gi|319405416|emb|CBI79035.1| putative flagellar motor protein MotB [Bartonella sp. AR 15-3]
Length = 384
Score = 38.6 bits (88), Expect = 0.29, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 43/109 (39%), Gaps = 6/109 (5%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG---SRNSSIALGLRRAYAV 109
F I +++++ + KH D +I GH D + + L RA
Sbjct: 247 MFKVGLSVPTARTIDLIASMAGIIAKHQGDIVISGHTDARPYRSTVYDNWQLSTARAQMA 306
Query: 110 FNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
+ V G+ R+ +V Y + D A A+NRR +F++ +
Sbjct: 307 YYMLVRGGLDEKRILRVEGY-ADRDLKNKKDPYA-AENRRISIFIRDPK 353
>gi|226944522|ref|YP_002799595.1| flagellar motor protein [Azotobacter vinelandii DJ]
gi|226719449|gb|ACO78620.1| Flagellar motor protein [Azotobacter vinelandii DJ]
Length = 306
Score = 38.6 bits (88), Expect = 0.29, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 42/130 (32%), Gaps = 17/130 (13%)
Query: 40 LQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR- 95
E + D F+ S + P +L L L + I GH D L
Sbjct: 144 TPEGLRIQLVDTEQRPMFEIGSARVAPYMRTLLRTLAPMLNELPNRIQISGHTDSLPYAG 203
Query: 96 ----NSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMP---SVYGHDEDAYAKNR 147
S+ L RA A +A G++ ++ + + +P A NR
Sbjct: 204 GEAGYSNWELSADRANASRRELIAGGLALEKLLRTSGMSDRIPFEGVAPND-----AANR 258
Query: 148 RAIVFLKGCR 157
R V + R
Sbjct: 259 RIAVIVLDSR 268
>gi|332187888|ref|ZP_08389621.1| ompA family protein [Sphingomonas sp. S17]
gi|332012049|gb|EGI54121.1| ompA family protein [Sphingomonas sp. S17]
Length = 297
Score = 38.6 bits (88), Expect = 0.29, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 42/110 (38%), Gaps = 7/110 (6%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR----NSSIALGLR 104
D F + S+ PA Q++ + + +I GH D + ++ L
Sbjct: 181 ADYSMFSMGTTSLEPAASQLIGTIAKTVADVPNTIMIRGHTDSVPYGDPRAMNNWMLSSG 240
Query: 105 RAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA A A G+ SR + + P + G+ D +NRR + L
Sbjct: 241 RAEATRRRLAAGGLPESRFERIEGVADREPMITGNPSD--PRNRRVAITL 288
>gi|254457971|ref|ZP_05071398.1| putative membrane protein [Campylobacterales bacterium GD 1]
gi|207085364|gb|EDZ62649.1| putative membrane protein [Campylobacterales bacterium GD 1]
Length = 393
Score = 38.6 bits (88), Expect = 0.29, Method: Composition-based stats.
Identities = 19/125 (15%), Positives = 44/125 (35%), Gaps = 15/125 (12%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLG----------SWLEKHDCDFLIEGHADELGS 94
+ ++ F ++P+ + LS + + ++ IEGH + GS
Sbjct: 250 ALRFSSNILFTQGEAELKPSAKKELSRILGKYIDVLLNDPKMRRYVDLITIEGHTNSDGS 309
Query: 95 RNSSIALGLRRAYAVFNYFVARGI-----SASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
++ L RRA AV + + + + P + + ++ +RR
Sbjct: 310 YLFNLDLSQRRALAVMEFLYTQYPNNRELFKKYLSASGRSFAEPILDANKKEDKDASRRI 369
Query: 150 IVFLK 154
+ +
Sbjct: 370 EIKFR 374
>gi|161502956|ref|YP_001570068.1| flagellar motor protein MotB [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|160864303|gb|ABX20926.1| hypothetical protein SARI_01018 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 309
Score = 38.6 bits (88), Expect = 0.29, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 152 QIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNGIPNRISLAGHTDDFPYANGEKGYSN 211
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A VA G+ + ++V M +D A NRR + + +
Sbjct: 212 WELSADRANASRRELVAGGLDNGKVLRVVGMAATMRLSDRGPDD--AINRRISLLVLNKQ 269
Query: 158 A 158
A
Sbjct: 270 A 270
>gi|153812960|ref|ZP_01965628.1| hypothetical protein RUMOBE_03367 [Ruminococcus obeum ATCC 29174]
gi|149830907|gb|EDM85997.1| hypothetical protein RUMOBE_03367 [Ruminococcus obeum ATCC 29174]
Length = 335
Score = 38.6 bits (88), Expect = 0.29, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 46/141 (32%), Gaps = 19/141 (13%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK---------HDCDF 83
+N + + ++ SV FD + A Q L + K + +
Sbjct: 156 NNINVDIDAQTGALTLEASVMFDYDQAELTDAGKQALEQILPIYCKVLLQDDYMKYLAEI 215
Query: 84 LIEGHADELGSRNSSIALGLRRAYAVFNYF----------VARGISASRMKVTSYGKEMP 133
+I+G+ D G + ++ L +R+ AV Y + V + P
Sbjct: 216 IIDGYTDTDGDYSYNLQLSQQRSLAVAQYLLDIQGNFLDTTQSQNLEKYLTVNGHSMANP 275
Query: 134 SVYGHDEDAYAKNRRAIVFLK 154
+ + +RR V +
Sbjct: 276 VLDANGNVDKDASRRVEVKFR 296
>gi|296126315|ref|YP_003633567.1| outer membrane protein [Brachyspira murdochii DSM 12563]
gi|296018131|gb|ADG71368.1| outer membrane protein [Brachyspira murdochii DSM 12563]
Length = 205
Score = 38.6 bits (88), Expect = 0.29, Method: Composition-based stats.
Identities = 27/186 (14%), Positives = 58/186 (31%), Gaps = 38/186 (20%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---------- 50
M+ + + L I++ + E++ Q ++ D
Sbjct: 1 MKKIILIMSLIFISIAACKSAPVATGPEEGSGFKTTEANNQNAKGYTLPDGAAVKETPRG 60
Query: 51 ----------------------SVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEG 87
V F + + + + + ++ + ++EG
Sbjct: 61 KVLVLHDPKSKTDIGKSGNASYEVKFGFDNTVEIGSYKEAYNLVYQIIKNNPNIRIMVEG 120
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
++ + G + L RRA FNY + G SR+ ++G+ +P E NR
Sbjct: 121 NSSKEGPAPYNYQLSQRRADTSFNYIIKLGSENSRLLKNAFGEALPEYPTLKE-----NR 175
Query: 148 RAIVFL 153
R +
Sbjct: 176 RCEFII 181
>gi|104783884|ref|YP_610382.1| flagellar motor protein MotB [Pseudomonas entomophila L48]
gi|95112871|emb|CAK17599.1| putative flagellar motor MotB protein [Pseudomonas entomophila L48]
Length = 341
Score = 38.6 bits (88), Expect = 0.29, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 44/142 (30%), Gaps = 10/142 (7%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ ++ + Q+ + D FD S ++P +L + ++
Sbjct: 136 NPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDLGSARLQPYFEDILLAMADTIKAVPN 195
Query: 82 DFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVY 136
I GH D + L RA A VA G ++ +V Y
Sbjct: 196 KISISGHTDAKPYAGTGDFGNWELSANRANAARRALVAGGYPDGQVARVVGYASSS-LFD 254
Query: 137 GHDEDAYAKNRRAIVFLKGCRA 158
+ NRR + + +A
Sbjct: 255 RENPFN-PVNRRIDIIVLTKKA 275
>gi|206971674|ref|ZP_03232624.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus AH1134]
gi|206733659|gb|EDZ50831.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus AH1134]
Length = 283
Score = 38.6 bits (88), Expect = 0.29, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 1 MQYSTIFI-ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFD 55
M+ IFI + + M+++S + D ++S + E L ++ G+S +
Sbjct: 1 MKKKKIFIGTIISCMMLALSACGSSDNVVTSKVGNVTEKELSKELRQQYGESTLYQ 56
>gi|34498443|ref|NP_902658.1| chemotaxis lafU protein [Chromobacterium violaceum ATCC 12472]
gi|34104298|gb|AAQ60657.1| chemotaxis lafU protein [Chromobacterium violaceum ATCC 12472]
Length = 328
Score = 38.6 bits (88), Expect = 0.29, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 55/147 (37%), Gaps = 13/147 (8%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSNLGS 74
++ + ++ + + L ++ D+ F+ S + P +L +GS
Sbjct: 137 LAAQLSEMSQKAGLSSNLQTVITPYGLRVTLHDTDQQGMFERGSAIVEPRFRSLLQQIGS 196
Query: 75 WLEKHDCDFLIEGHADELGSR-------NSSIALGLRRAYAVFNYFVARGISASR-MKVT 126
L + D L+ GH D S+ +L RA A + + G++A ++V
Sbjct: 197 MLGEIDNRLLVVGHTDAAQYHRAGGFAAMSNWSLSSNRAMAARLHMMQGGLAADSVLQVV 256
Query: 127 SYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ P H A NRR + +
Sbjct: 257 GMAERAPLDKQH-PLG-AVNRRIELLV 281
>gi|118588413|ref|ZP_01545822.1| probable chemotaxis protein [Stappia aggregata IAM 12614]
gi|118439119|gb|EAV45751.1| probable chemotaxis protein [Stappia aggregata IAM 12614]
Length = 285
Score = 38.6 bits (88), Expect = 0.30, Method: Composition-based stats.
Identities = 23/152 (15%), Positives = 43/152 (28%), Gaps = 10/152 (6%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
A S+ +I+ + + +E + + D F S +
Sbjct: 124 FATAAASLRQAWQEMPEITEISSNIILEETEEGLNIMLVDQDGRSMFREGSKYPYETTRR 183
Query: 68 VLSNLGSWLEKHDCDFLIEGHAD----ELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
+++ + L + I GH + + L RA G+ ++
Sbjct: 184 LIAKMAPVLSQMPNRIEITGHTTAGRQSIDPSYTGWELSSERANIARQILSEYGVPDNQF 243
Query: 124 -KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
V P A NRR + LK
Sbjct: 244 YSVVGKADTEPLFPND--PYLAANRRIGILLK 273
>gi|53712971|ref|YP_098963.1| major outer membrane protein OmpA [Bacteroides fragilis YCH46]
gi|60681183|ref|YP_211327.1| putative outer membrane protein [Bacteroides fragilis NCTC 9343]
gi|253563051|ref|ZP_04840508.1| major outer membrane protein OmpA [Bacteroides sp. 3_2_5]
gi|265763068|ref|ZP_06091636.1| major outer membrane protein OmpA [Bacteroides sp. 2_1_16]
gi|52215836|dbj|BAD48429.1| major outer membrane protein OmpA [Bacteroides fragilis YCH46]
gi|60492617|emb|CAH07389.1| putative outer membrane protein [Bacteroides fragilis NCTC 9343]
gi|251946827|gb|EES87109.1| major outer membrane protein OmpA [Bacteroides sp. 3_2_5]
gi|263255676|gb|EEZ27022.1| major outer membrane protein OmpA [Bacteroides sp. 2_1_16]
gi|301162672|emb|CBW22219.1| putative outer membrane protein [Bacteroides fragilis 638R]
Length = 372
Score = 38.6 bits (88), Expect = 0.30, Method: Composition-based stats.
Identities = 21/116 (18%), Positives = 48/116 (41%), Gaps = 2/116 (1%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
++ + D D K + + + ++ + ++FF I + +
Sbjct: 239 LAKAQSDLADAKNALANVKPVTKEVVKEIEVAGPRAIFFQIGKSKIDDYGMVNIQLAAKI 298
Query: 76 LE-KHDCDFLIEGHAD-ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
L+ D + + G+AD GS + L RA AV++ + G+S ++++ +G
Sbjct: 299 LKANPDKKYKVAGYADKATGSAKWNQKLSEARAQAVYDALIKEGVSKDQLELVGFG 354
>gi|114330218|ref|YP_746440.1| flagellar motor protein MotB [Nitrosomonas eutropha C91]
gi|114307232|gb|ABI58475.1| OmpA/MotB domain protein [Nitrosomonas eutropha C91]
Length = 314
Score = 38.6 bits (88), Expect = 0.30, Method: Composition-based stats.
Identities = 20/121 (16%), Positives = 36/121 (29%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F ++P +L +G L + GH D S+
Sbjct: 163 QIVDEKNRPMFAIGKAELQPYTKMILHEIGKMLNDVGNKISLSGHTDATPYPSGEKSYSN 222
Query: 99 IALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A +A G++ ++V + NRR + + +
Sbjct: 223 WELSADRANASRRELIAGGMNPEKMLRVVGLSSAVMFDKEDSFS--PFNRRISIIVMNKK 280
Query: 158 A 158
A
Sbjct: 281 A 281
>gi|78485775|ref|YP_391700.1| OmpA/MotB [Thiomicrospira crunogena XCL-2]
gi|78364061|gb|ABB42026.1| Flagellar motor protein MotB [Thiomicrospira crunogena XCL-2]
Length = 296
Score = 38.6 bits (88), Expect = 0.30, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 10/128 (7%)
Query: 40 LQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR- 95
V D F + + ++L +GS L + + I GH D G
Sbjct: 144 TPNGLQVQVLDDRKRPMFGSGVDLPKDYAAKLLKEVGSVLAQTNNRISIAGHTDSSGYHS 203
Query: 96 ---NSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
++ L RA A + G+ ++ +V +P + +NRR +
Sbjct: 204 NAEYTNWELSADRANAARRLLLDGGVGEKKIAQVVGLSDTVPFDK-ENPYN-PRNRRISI 261
Query: 152 FLKGCRAN 159
+ A+
Sbjct: 262 IVLNKEAD 269
>gi|307318924|ref|ZP_07598355.1| OmpA/MotB domain protein [Sinorhizobium meliloti AK83]
gi|306895338|gb|EFN26093.1| OmpA/MotB domain protein [Sinorhizobium meliloti AK83]
Length = 394
Score = 38.6 bits (88), Expect = 0.31, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 42/114 (36%), Gaps = 8/114 (7%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR---NSSIALGLRRA 106
D+ F S + + + +G L + + GH D + + L RA
Sbjct: 284 DAPMFAVGSAVPQKELVLAMEKIGRLLAERPGAVAVRGHTDGRPFKDGTYDNWRLSAARA 343
Query: 107 YAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYA-KNRRAIVFLKGCRA 158
+ + V G+ R+ +++ + V AYA NRR + L+ +
Sbjct: 344 QSAYYMLVRGGLEEERVKQISGFADRRLQVPND---AYAPANRRIEILLQSGQG 394
>gi|254486102|ref|ZP_05099307.1| conserved hypothetical protein [Roseobacter sp. GAI101]
gi|214042971|gb|EEB83609.1| conserved hypothetical protein [Roseobacter sp. GAI101]
Length = 66
Score = 38.6 bits (88), Expect = 0.31, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 92 LGSRNSSIALGLRRAYAVFNYFVAR-GISASRMKVTSYGKEMPSVYGHDEDAYAKNR 147
+ + + L RA +V Y + GI+ R+ +G+ P G E A A NR
Sbjct: 1 MDAFADNWKLIQARALSVVKYMINFLGIAPDRLAAKGFGRYHPVPEGDSESARAHNR 57
>gi|213426377|ref|ZP_03359127.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
Length = 309
Score = 38.6 bits (88), Expect = 0.31, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 152 QIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNGIPNRISLAGHTDDFPYANGEKGYSN 211
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A VA G+ + ++V M +D A NRR + + +
Sbjct: 212 WELSADRANASRRELVAGGLDNGKVLRVVGMAATMRLSDRGPDD--AINRRISLLVLNKQ 269
Query: 158 A 158
A
Sbjct: 270 A 270
>gi|162453377|ref|YP_001615744.1| hypothetical protein sce5101 [Sorangium cellulosum 'So ce 56']
gi|161163959|emb|CAN95264.1| hypothetical protein predicted by Glimmer/Critica [Sorangium
cellulosum 'So ce 56']
Length = 190
Score = 38.6 bits (88), Expect = 0.31, Method: Composition-based stats.
Identities = 34/181 (18%), Positives = 49/181 (27%), Gaps = 39/181 (21%)
Query: 8 IILSAITMMSISGIDNLDT-KISSPDTVLNESSLQEQFSSSVGD---------------- 50
+ L A+ + + + + P+ L + D
Sbjct: 10 LCLGALALSLFTACAAAPPPQQARPEPRLPNPGPDGVYKVEWPDLREGEDRFIGLTLGAD 69
Query: 51 --------SVFFDTSSYSIRPADIQVLSNLGSWLEKHD---CDFLIEGHADELGSRNSSI 99
F S P + L L L + G AD G+ +
Sbjct: 70 IADVCRLPKTSFAFDSSEPLPQEHVELRALVDCLRSSSLEGARIELVGRADPRGTAAYNQ 129
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKE-----MPSVYGHDEDAYAKNRRAIVFLK 154
L LRRA V V GI A R+ + G P Y +RR V L
Sbjct: 130 DLSLRRAARVKEILVKEGIPADRITTRATGASEAVGAQPMYS------YGYDRRVDVALI 183
Query: 155 G 155
G
Sbjct: 184 G 184
>gi|54294009|ref|YP_126424.1| hypothetical protein lpl1070 [Legionella pneumophila str. Lens]
gi|53753841|emb|CAH15307.1| hypothetical protein lpl1070 [Legionella pneumophila str. Lens]
Length = 234
Score = 38.6 bits (88), Expect = 0.31, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 30/103 (29%), Gaps = 14/103 (13%)
Query: 59 YSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV---- 114
+L IEGH D GS + L RRA +VFN +
Sbjct: 116 AVTEEKFKSQCESLNLTSRDGLDAVFIEGHTDSTGSSEHNWYLSARRAISVFNELIDAKP 175
Query: 115 ------ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+ V+ Y P + + NRR +
Sbjct: 176 LLNVGLKNINGIPILNVSGYEARRPIDPNN----LSVNRRIEL 214
>gi|255008471|ref|ZP_05280597.1| putative outer membrane protein [Bacteroides fragilis 3_1_12]
gi|313146200|ref|ZP_07808393.1| major outer membrane protein OmpA [Bacteroides fragilis 3_1_12]
gi|313134967|gb|EFR52327.1| major outer membrane protein OmpA [Bacteroides fragilis 3_1_12]
Length = 372
Score = 38.2 bits (87), Expect = 0.32, Method: Composition-based stats.
Identities = 21/116 (18%), Positives = 48/116 (41%), Gaps = 2/116 (1%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
++ + D D K + + + ++ + ++FF I + +
Sbjct: 239 LAKAQSDLADAKNALANVKPVTKEVVKEVEVAGPRAIFFQIGKSKIDDYGMVNIQLAAKI 298
Query: 76 LE-KHDCDFLIEGHAD-ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
L+ D + + G+AD GS + L RA AV++ + G+S ++++ +G
Sbjct: 299 LKANPDKKYKVAGYADKATGSAKWNQKLSEARAQAVYDALIKEGVSKDQLELVGFG 354
>gi|298386442|ref|ZP_06995998.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_14]
gi|298260819|gb|EFI03687.1| major outer membrane protein OmpA [Bacteroides sp. 1_1_14]
Length = 363
Score = 38.2 bits (87), Expect = 0.32, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 50/133 (37%), Gaps = 8/133 (6%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDC 81
+ + +E + ++FF +S I+ +++L + +
Sbjct: 235 VVTEQPKPTPVAEKPQPKKEVVIEPMKQNIFFAINSAKIQDDQQAKIASLVEYLEKNATA 294
Query: 82 DFLIEGHADE-LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ G+AD+ G+ + L +RA V A+GI+A R+ V G +
Sbjct: 295 KVSVTGYADKGTGNARINSKLSEKRANNVVEALKAKGIAADRITVAYKGDT--VQPYNTP 352
Query: 141 DAYAKNRRAIVFL 153
+ +N R + +
Sbjct: 353 E---EN-RVSICI 361
>gi|311741627|ref|ZP_07715450.1| hypothetical protein HMPREF0305_12385 [Corynebacterium
pseudogenitalium ATCC 33035]
gi|311303291|gb|EFQ79371.1| hypothetical protein HMPREF0305_12385 [Corynebacterium
pseudogenitalium ATCC 33035]
Length = 188
Score = 38.2 bits (87), Expect = 0.33, Method: Composition-based stats.
Identities = 20/166 (12%), Positives = 50/166 (30%), Gaps = 20/166 (12%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSS-- 58
M+ + I + L++ ++ G D D + + Q + + D+ D
Sbjct: 1 MKKTAIALALASTVALTACGNDEPDGTDTGMEDPTVSQWEQPEVRGPLQDTDQEDVDKVG 60
Query: 59 ----YSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV 114
I + + K + + + S + + ++ + +
Sbjct: 61 HDVVEQIFSWSPKDDHTIADAARKAEPLMDEDFAYNNRDSWSGMFKVPGKQWAS---WVD 117
Query: 115 ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR---AIVFLKGCR 157
+ ++ + +E P E RR V +KG +
Sbjct: 118 DKATASVEL-TEGL-EERP-EDTDMEA-----RRQYSVEVTVKGDK 155
>gi|146312113|ref|YP_001177187.1| flagellar motor protein MotB [Enterobacter sp. 638]
gi|145318989|gb|ABP61136.1| OmpA/MotB domain protein [Enterobacter sp. 638]
Length = 309
Score = 38.2 bits (87), Expect = 0.33, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 39/121 (32%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + +L + L + GH D+ S+
Sbjct: 152 QIIDSQNRPMFKTGSAEVEYYMRDILRGIAPVLNGIPNHISLSGHTDDFQYANGEKGYSN 211
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A VA G+ + ++V M ED A NRR + + +
Sbjct: 212 WELSADRANASRRELVAGGLDDGKVLRVVGMSSSMRVTDRGPED--AVNRRISLLVLNQQ 269
Query: 158 A 158
A
Sbjct: 270 A 270
>gi|16765264|ref|NP_460879.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|56413159|ref|YP_150234.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|62180499|ref|YP_216916.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|161613518|ref|YP_001587483.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|167552438|ref|ZP_02346191.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|167994228|ref|ZP_02575320.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168238556|ref|ZP_02663614.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|168241555|ref|ZP_02666487.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|168259799|ref|ZP_02681772.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168462543|ref|ZP_02696474.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|168820750|ref|ZP_02832750.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|194444100|ref|YP_002041189.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194450845|ref|YP_002045977.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194472145|ref|ZP_03078129.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194737421|ref|YP_002114959.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197248088|ref|YP_002146098.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197264977|ref|ZP_03165051.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197362085|ref|YP_002141722.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|198243979|ref|YP_002215160.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200390054|ref|ZP_03216665.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204931026|ref|ZP_03221852.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205352375|ref|YP_002226176.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207856557|ref|YP_002243208.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224583574|ref|YP_002637372.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|238912501|ref|ZP_04656338.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|2494511|sp|P55892|MOTB_SALTY RecName: Full=Motility protein B; AltName: Full=Chemotaxis protein
MotB
gi|1764128|gb|AAC45266.1| MotB [Salmonella enterica subsp. enterica serovar Typhimurium]
gi|16420459|gb|AAL20838.1| enables flagellar motor rotation [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|56127416|gb|AAV76922.1| motility protein B [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|62128132|gb|AAX65835.1| enables flagellar motor rotation, linking torque machinery to cell
wall [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|161362882|gb|ABX66650.1| hypothetical protein SPAB_01238 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194402763|gb|ACF62985.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194409149|gb|ACF69368.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194458509|gb|EDX47348.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194712923|gb|ACF92144.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195634203|gb|EDX52555.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197093562|emb|CAR59024.1| motility protein B [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|197211791|gb|ACH49188.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197243232|gb|EDY25852.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197288646|gb|EDY28021.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|197938495|gb|ACH75828.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|199602499|gb|EDZ01045.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|204320070|gb|EDZ05275.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205272156|emb|CAR37011.1| motility protein B [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|205322895|gb|EDZ10734.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205327891|gb|EDZ14655.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205339183|gb|EDZ25947.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|205342679|gb|EDZ29443.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205350979|gb|EDZ37610.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|206708360|emb|CAR32664.1| motility protein B [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|224468101|gb|ACN45931.1| flagellar motor protein [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|261247092|emb|CBG24913.1| motility protein B [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|267993909|gb|ACY88794.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301158442|emb|CBW17951.1| motility protein B [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|312912916|dbj|BAJ36890.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|320085458|emb|CBY95239.1| Chemotaxis protein motB Motility protein B [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
gi|321224566|gb|EFX49629.1| Flagellar motor rotation protein MotB [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|322616922|gb|EFY13830.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322618161|gb|EFY15053.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322625831|gb|EFY22650.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322626283|gb|EFY23093.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322632697|gb|EFY29442.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322639041|gb|EFY35734.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322640481|gb|EFY37134.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322646010|gb|EFY42527.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322655476|gb|EFY51784.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322660255|gb|EFY56493.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322668121|gb|EFY64280.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322674119|gb|EFY70213.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322675527|gb|EFY71601.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322683059|gb|EFY79075.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322686753|gb|EFY82731.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|322714975|gb|EFZ06546.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
gi|323130206|gb|ADX17636.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|323195356|gb|EFZ80536.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323199248|gb|EFZ84343.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323204163|gb|EFZ89175.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323211878|gb|EFZ96707.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323217488|gb|EGA02207.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323221977|gb|EGA06366.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323231510|gb|EGA15623.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323235952|gb|EGA20031.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323240522|gb|EGA24565.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323245414|gb|EGA29414.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323250185|gb|EGA34077.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323253633|gb|EGA37461.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323258567|gb|EGA42233.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323259386|gb|EGA43023.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323266189|gb|EGA49679.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|326622909|gb|EGE29254.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
gi|326627426|gb|EGE33769.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
gi|332988815|gb|AEF07798.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 309
Score = 38.2 bits (87), Expect = 0.33, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 152 QIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNGIPNRISLAGHTDDFPYANGEKGYSN 211
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A VA G+ + ++V M +D A NRR + + +
Sbjct: 212 WELSADRANASRRELVAGGLDNGKVLRVVGMAATMRLSDRGPDD--AINRRISLLVLNKQ 269
Query: 158 A 158
A
Sbjct: 270 A 270
>gi|16760871|ref|NP_456488.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29141437|ref|NP_804779.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|213163277|ref|ZP_03348987.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213622329|ref|ZP_03375112.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
gi|25298889|pir||AF0746 motility protein B [imported] - Salmonella enterica subsp. enterica
serovar Typhi (strain CT18)
gi|16503168|emb|CAD05673.1| motility protein B [Salmonella enterica subsp. enterica serovar
Typhi]
gi|29137064|gb|AAO68628.1| motility protein B [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
Length = 309
Score = 38.2 bits (87), Expect = 0.33, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 152 QIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNGIPNRISLAGHTDDFPYANGEKGYSN 211
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A VA G+ + ++V M +D A NRR + + +
Sbjct: 212 WELSADRANASRRELVAGGLDNGKVLRVVGMAATMRLSDRGPDD--AINRRISLLVLNKQ 269
Query: 158 A 158
A
Sbjct: 270 A 270
>gi|294627796|ref|ZP_06706376.1| lipoprotein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
gi|292597892|gb|EFF42049.1| lipoprotein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
11122]
Length = 186
Score = 38.2 bits (87), Expect = 0.33, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 37/122 (30%), Gaps = 10/122 (8%)
Query: 38 SSLQEQFSSSVGDSVFFDTSSYSIRPADIQ------VLSNLGSWLEKHDCDFLIEGHADE 91
++Q Q + D + S Q +++L + + G D
Sbjct: 62 QAVQRQQAPRAADRPLYSVVSVQFPWNSAQFRPTPAQVAHLRGLIAAGVAHVQVRGRTDN 121
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRMK--VTSYGKEMPSVYGHDEDAYAKNRRA 149
+ + RA A ++ + G+ + + S G D A NRR
Sbjct: 122 PNPSSGDEHIARGRAEAAKDWLIGEGVPSGIIDLNFVSAGDYR--SNNRLSDGRALNRRV 179
Query: 150 IV 151
+
Sbjct: 180 DI 181
>gi|323705966|ref|ZP_08117537.1| OmpA/MotB domain protein [Thermoanaerobacterium xylanolyticum
LX-11]
gi|323534764|gb|EGB24544.1| OmpA/MotB domain protein [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 230
Score = 38.2 bits (87), Expect = 0.33, Method: Composition-based stats.
Identities = 19/129 (14%), Positives = 43/129 (33%), Gaps = 20/129 (15%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL---------EKHDCDFLIEGHADELGSR 95
+ S + +FFD + ++ + L+ +K+ ++EGH D+ G
Sbjct: 83 AISFSEGIFFDKDKFELKDEGKRYLNEFFPRYISILMDPKFKKYISQIIVEGHTDDTGDY 142
Query: 96 NSSIALGLRRAYAVFNYFVA----------RGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
++ L +RA+ V Y + + + + + K
Sbjct: 143 VYNLELSQKRAFEVVRYILQSDIKGIDSKVKSDLMPYITANGRSYSQLIIENG-KVNREK 201
Query: 146 NRRAIVFLK 154
+RR +
Sbjct: 202 SRRVEFKFR 210
>gi|212709470|ref|ZP_03317598.1| hypothetical protein PROVALCAL_00512 [Providencia alcalifaciens DSM
30120]
gi|212687808|gb|EEB47336.1| hypothetical protein PROVALCAL_00512 [Providencia alcalifaciens DSM
30120]
Length = 312
Score = 38.2 bits (87), Expect = 0.33, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 38/116 (32%), Gaps = 9/116 (7%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ F S ++ P +L + L I GH D+L S+
Sbjct: 149 QIVDSANRPMFKVGSATVEPYMRDILRAIAPLLNDVPNRISISGHTDDLPYASEAYYSNW 208
Query: 100 ALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAK-NRRAIVFL 153
L RA A + G+ + ++V + E+ A NRR + +
Sbjct: 209 ELSSDRANASRRELIMGGMDERKVLRVVGMASSIHLDK---ENGLAPVNRRISIIV 261
>gi|221069302|ref|ZP_03545407.1| OmpA/MotB domain protein [Comamonas testosteroni KF-1]
gi|220714325|gb|EED69693.1| OmpA/MotB domain protein [Comamonas testosteroni KF-1]
Length = 353
Score = 38.2 bits (87), Expect = 0.33, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 42/116 (36%), Gaps = 8/116 (6%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD-----ELGSRNSSIALGL 103
+ FD+ S ++P +L +G+ + + + GH D S+ L
Sbjct: 168 QNRPMFDSGSAVVKPYMRDILREIGAAMGNAENRISLSGHTDAAPYGNADRGYSNWELSA 227
Query: 104 RRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
RA A V+ G+ ++ +V + A+NRR + + A
Sbjct: 228 DRANASRRELVSAGMPLDKLARVVGMSSSDLLLPEEPRA--AQNRRITITVLTKEA 281
>gi|328545495|ref|YP_004305604.1| flagellar motor protein MotB [polymorphum gilvum SL003B-26A1]
gi|326415236|gb|ADZ72299.1| Flagellar motor protein MotB [Polymorphum gilvum SL003B-26A1]
Length = 434
Score = 38.2 bits (87), Expect = 0.34, Method: Composition-based stats.
Identities = 29/137 (21%), Positives = 50/137 (36%), Gaps = 9/137 (6%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDS---VFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
+T + + + + S+ D F S RP ++++ +GS L
Sbjct: 295 AETPLGAAASRITVERTGAGLLISLTDDQDFGMFAVGSAEPRPELVRLMERIGSTLSARP 354
Query: 81 CDFLIEGHADELGSR---NSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVY 136
+I GH D R + L RA+ G+ A R++ + Y +
Sbjct: 355 GRIVIRGHTDARPFRSKTYDNWRLSSARAHMALYMLARGGVDAGRVERIEGY-ADRDLKR 413
Query: 137 GHDEDAYAKNRRAIVFL 153
D + A NRR +FL
Sbjct: 414 PSDPYS-AVNRRIEIFL 429
>gi|312959245|ref|ZP_07773763.1| OmpA/MotB [Pseudomonas fluorescens WH6]
gi|311286505|gb|EFQ65068.1| OmpA/MotB [Pseudomonas fluorescens WH6]
Length = 302
Score = 38.2 bits (87), Expect = 0.34, Method: Composition-based stats.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDC--DFLIEGHADELGSRNSSIALGLRRAYAV 109
V F + A Q L+ + +++ + GH+D G+R S+ + RRA AV
Sbjct: 176 VGFPGGGIELDAAAKQKLAVIIEFMKADPTVNHIELNGHSDNSGNRLSNRDVSRRRALAV 235
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGH 138
+YF A GI S++ + +G+ P V
Sbjct: 236 MDYFKANGIQESQITLRFHGESYPLVPNT 264
>gi|260905077|ref|ZP_05913399.1| flagellar motor protein [Brevibacterium linens BL2]
Length = 228
Score = 38.2 bits (87), Expect = 0.34, Method: Composition-based stats.
Identities = 9/39 (23%), Positives = 14/39 (35%), Gaps = 1/39 (2%)
Query: 123 MKVTSYGKEMPSVYG-HDEDAYAKNRRAIVFLKGCRANT 160
V+ Y P + A NRR + RA++
Sbjct: 177 FSVSGYSDTRPVNANQSTDLGAAANRRIDIRFTIVRADS 215
>gi|294783878|ref|ZP_06749200.1| SpoIID-like protein [Fusobacterium sp. 1_1_41FAA]
gi|294479690|gb|EFG27469.1| SpoIID-like protein [Fusobacterium sp. 1_1_41FAA]
Length = 523
Score = 38.2 bits (87), Expect = 0.35, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 35/117 (29%), Gaps = 12/117 (10%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFS------------SSV 48
M II+SA +++ S K P+ ++ E S ++
Sbjct: 1 MNKKISLIIVSAFLLLACSNNSGKKVKPVKPNGDYKVGTVVEGSSNNTNIERGNREKITL 60
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRR 105
++VF + L + H F + G DE + L R
Sbjct: 61 ENTVFKKLGLPLPYNTFGAAIPYLVPVNDNHKESFSVFGEYDENKALKYFKNLSSRG 117
>gi|168234012|ref|ZP_02659070.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205331986|gb|EDZ18750.1| chemotaxis protein MotB [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
Length = 309
Score = 38.2 bits (87), Expect = 0.35, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 39/121 (32%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS-----RNSS 98
+ F T S + P +L + L + H D+ S+
Sbjct: 152 QIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNGIPNRISLARHTDDFPYANGEKGYSN 211
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A VA G+ + ++V M +D A NRR + + +
Sbjct: 212 WELSADRANASRRELVAGGLDNGKVLRVVGMAATMRLSDRGPDD--AINRRISLLVLNKQ 269
Query: 158 A 158
A
Sbjct: 270 A 270
>gi|295691377|ref|YP_003595070.1| OmpA/MotB domain-containing protein [Caulobacter segnis ATCC 21756]
gi|295433280|gb|ADG12452.1| OmpA/MotB domain protein [Caulobacter segnis ATCC 21756]
Length = 154
Score = 38.2 bits (87), Expect = 0.35, Method: Composition-based stats.
Identities = 29/153 (18%), Positives = 57/153 (37%), Gaps = 8/153 (5%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ I++ A+ ++ + + + + S S++FD S +
Sbjct: 1 MKTMKATILIGAVLTLAACAETSGPWRTLKRPVAVAGPT-----CLSFTSSIYFDQDSAA 55
Query: 61 IRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
+ P VL+N + + + G AD +G+ +++AL RRA V + A G
Sbjct: 56 LTPEARMVLANARTQAKGCRVESVRVIGLADAVGASEANLALSKRRADVVSSALAAHGFG 115
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ + + G A RRA +
Sbjct: 116 KADFDLAAVGDAGARAP--SGAAAPLRRRADIV 146
>gi|167644059|ref|YP_001681722.1| OmpA/MotB domain-containing protein [Caulobacter sp. K31]
gi|167346489|gb|ABZ69224.1| OmpA/MotB domain protein [Caulobacter sp. K31]
Length = 156
Score = 38.2 bits (87), Expect = 0.35, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 56/154 (36%), Gaps = 8/154 (5%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ +I A+ ++G + S ++ + E F+ ++F+T S +
Sbjct: 1 MKRVGPTVICMAMAAGLVAGCATNNPWPKSRSQIVETAPACEDFAVQ----IYFETESAA 56
Query: 61 IRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGSRNSSI-ALGLRRAYAVFNYFVARGI 118
+ VL G+ + + G +D +G ++S AL +RA V G
Sbjct: 57 LTNEARSVLKGAGALAKGCKVASARVIGLSDAVGGGSNSNLALSRKRADTVKAALDKIGF 116
Query: 119 SASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+V + G +A RRA +
Sbjct: 117 RDVAFEVGAAGDAG--ATTSGGEARPLRRRADIK 148
>gi|333003303|gb|EGK22849.1| chemotaxis protein motB [Shigella flexneri K-218]
Length = 265
Score = 38.2 bits (87), Expect = 0.35, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS-----RNSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 108 QIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSN 167
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A + G+ + + ++V M +D A NRR + + +
Sbjct: 168 WELSADRANASRRELMVGGLDSGKVLRVVGMAATMRLSDRGPDD--AVNRRISLLVLNKQ 225
Query: 158 A 158
A
Sbjct: 226 A 226
>gi|315617885|gb|EFU98483.1| chemotaxis protein motB [Escherichia coli 3431]
Length = 265
Score = 38.2 bits (87), Expect = 0.35, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS-----RNSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 108 QIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSN 167
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A + G+ + + ++V M +D A NRR + + +
Sbjct: 168 WELSADRANASRRELMVGGLDSGKVLRVVGMAATMRLSDRGPDD--AVNRRISLLVLNKQ 225
Query: 158 A 158
A
Sbjct: 226 A 226
>gi|255008463|ref|ZP_05280589.1| outer membrane porin F precursor [Bacteroides fragilis 3_1_12]
gi|313146191|ref|ZP_07808384.1| major outer membrane protein OmpA [Bacteroides fragilis 3_1_12]
gi|313134958|gb|EFR52318.1| major outer membrane protein OmpA [Bacteroides fragilis 3_1_12]
Length = 373
Score = 38.2 bits (87), Expect = 0.35, Method: Composition-based stats.
Identities = 24/116 (20%), Positives = 49/116 (42%), Gaps = 2/116 (1%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
+S + D D K + + + ++ + +VFF I + +
Sbjct: 240 LSKAQSDLADAKNALANVKPVTKEVVKEVEVAGPRAVFFQIGKSKIDDYGMVNIQLAAKI 299
Query: 76 LE-KHDCDFLIEGHADE-LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
L+ D + + G+ADE GS + L RA AV++ + G+S ++++ +G
Sbjct: 300 LKANPDKKYKVAGYADEATGSAKWNQKLSEARAQAVYDALIKEGVSKDQLELIGFG 355
>gi|255021445|ref|ZP_05293492.1| Flagellar motor rotation protein MotB [Acidithiobacillus caldus
ATCC 51756]
gi|254969150|gb|EET26665.1| Flagellar motor rotation protein MotB [Acidithiobacillus caldus
ATCC 51756]
Length = 307
Score = 38.2 bits (87), Expect = 0.35, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 44/125 (35%), Gaps = 11/125 (8%)
Query: 38 SSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD---- 90
S E V D F S + P + S + L++ I GH D
Sbjct: 151 SITPEGLRIQVVDSSKRPMFANGSTVLEPYARTIFSAIAPTLDELPNRISITGHTDALRY 210
Query: 91 -ELGSRNSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRR 148
G S+ L RA +V V G++ ++ ++V G + V + NRR
Sbjct: 211 LNEGRGYSNFNLSAGRANSVRQILVQSGLAENKVLRVVGMGSAVLFVPKDPDS--PLNRR 268
Query: 149 AIVFL 153
+ +
Sbjct: 269 VSIVV 273
>gi|324994550|gb|EGC26463.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus sanguinis SK678]
Length = 272
Score = 38.2 bits (87), Expect = 0.36, Method: Composition-based stats.
Identities = 14/110 (12%), Positives = 34/110 (30%), Gaps = 4/110 (3%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSL----QEQFSSSVGDSVFFDT 56
M+YS + + +++ ++ T SS + +S + + +
Sbjct: 11 MKYSKLIFLAASVLVLGACSSGKETTGDSSDKQAASSTSTIKKQDAENGKNSSQDTTTSS 70
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
S + L + + + ++G DE+ N L
Sbjct: 71 DSADTKKEQNHEAKTLDQNVSYNGSYYSVKGKYDEILVVNKHYPLSASYN 120
>gi|26991582|ref|NP_747007.1| flagellar motor protein MotB [Pseudomonas putida KT2440]
gi|24986670|gb|AAN70471.1|AE016688_10 motility protein, MotB family [Pseudomonas putida KT2440]
Length = 346
Score = 38.2 bits (87), Expect = 0.36, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 44/142 (30%), Gaps = 10/142 (7%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ ++ + Q+ + D FD S ++P +L + ++
Sbjct: 136 NPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDIGSARLQPYFEDILLAMADTIKAVPN 195
Query: 82 DFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVY 136
I GH D + L RA A VA G ++ +V Y
Sbjct: 196 KVSISGHTDAKPYAGTGEYGNWELSANRANAARRALVAGGYPDGQVARVVGYASSS-LFD 254
Query: 137 GHDEDAYAKNRRAIVFLKGCRA 158
D NRR + + +A
Sbjct: 255 RKDPFN-PVNRRIDIIVLTKKA 275
>gi|257097127|pdb|2ZVY|A Chain A, Structure Of The Periplasmic Domain Of Motb From
Salmonella (Crystal Form Ii)
gi|257097128|pdb|2ZVY|B Chain B, Structure Of The Periplasmic Domain Of Motb From
Salmonella (Crystal Form Ii)
gi|257097129|pdb|2ZVZ|A Chain A, Structure Of The Periplasmic Domain Of Motb From
Salmonella (Crystal Form Iii)
gi|257097130|pdb|2ZVZ|B Chain B, Structure Of The Periplasmic Domain Of Motb From
Salmonella (Crystal Form Iii)
Length = 183
Score = 38.2 bits (87), Expect = 0.36, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS-----RNSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 54 QIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNGIPNRISLAGHTDDFPYANGEKGYSN 113
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A VA G+ + ++V M +D A NRR + + +
Sbjct: 114 WELSADRANASRRELVAGGLDNGKVLRVVGMAATMRLSDRGPDD--AINRRISLLVLNKQ 171
Query: 158 A 158
A
Sbjct: 172 A 172
>gi|319902641|ref|YP_004162369.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108]
gi|319417672|gb|ADV44783.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108]
Length = 386
Score = 38.2 bits (87), Expect = 0.37, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 60/140 (42%), Gaps = 12/140 (8%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
++ + D + K + + + ++ + ++FF S I +
Sbjct: 253 LAQAQADLANAKNALANVKPETKEVVKEVQVAGPRAIFFKIGSAKIDDYGKVNIELAAKV 312
Query: 76 LEKH-DCDFLIEGHAD-ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
L+ + D + I G+AD GS + + L +RA AV++ +A+G+ ++++ +G
Sbjct: 313 LKANSDKKYKIAGYADKATGSASWNQKLSEKRAQAVYDALIAQGVDKDQLELVGFG---- 368
Query: 134 SVYGHDEDAYAKN--RRAIV 151
E+ + KN R ++
Sbjct: 369 ----GTENMFGKNFLNRVVI 384
>gi|149186172|ref|ZP_01864486.1| putative outer membrane lipoprotein [Erythrobacter sp. SD-21]
gi|148830203|gb|EDL48640.1| putative outer membrane lipoprotein [Erythrobacter sp. SD-21]
Length = 245
Score = 38.2 bits (87), Expect = 0.37, Method: Composition-based stats.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFL-IEGHADELGSRNSSIALGLRRAYA 108
++ F +S ++ PA +L + + LE + I GH ++ GS +++AL + RA
Sbjct: 126 RTIRFQEASAALLPASRILLDEVAAALEPCSGAIIAITGHTNKSGSEAANLALSMDRARV 185
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V V RGI S ++ G P+ ED NRR +
Sbjct: 186 VREALVRRGIPRSSLRARGMGSSEPAERLKPED--PANRRIEFSV 228
>gi|293410200|ref|ZP_06653776.1| motB [Escherichia coli B354]
gi|291470668|gb|EFF13152.1| motB [Escherichia coli B354]
Length = 241
Score = 38.2 bits (87), Expect = 0.38, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS-----RNSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 84 QIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSN 143
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A + G+ + + ++V M +D A NRR + + +
Sbjct: 144 WELSADRANASRRELMVGGLDSGKVLRVVGMAATMRLSDRGPDD--AVNRRISLLVLNKQ 201
Query: 158 A 158
A
Sbjct: 202 A 202
>gi|148549982|ref|YP_001270084.1| flagellar motor protein MotB [Pseudomonas putida F1]
gi|148514040|gb|ABQ80900.1| OmpA/MotB domain protein [Pseudomonas putida F1]
Length = 346
Score = 38.2 bits (87), Expect = 0.38, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 44/142 (30%), Gaps = 10/142 (7%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ ++ + Q+ + D FD S ++P +L + ++
Sbjct: 136 NPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDIGSARLQPYFEDILLAMADTIKAVPN 195
Query: 82 DFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVY 136
I GH D + L RA A VA G ++ +V Y
Sbjct: 196 KISISGHTDAKPYAGTGEYGNWELSANRANAARRALVAGGYPDGQVARVVGYASSS-LFD 254
Query: 137 GHDEDAYAKNRRAIVFLKGCRA 158
D NRR + + +A
Sbjct: 255 RKDPFN-PVNRRIDIIVLTKKA 275
>gi|121596103|ref|YP_987999.1| OmpA/MotB domain-containing protein [Acidovorax sp. JS42]
gi|120608183|gb|ABM43923.1| OmpA/MotB domain protein [Acidovorax sp. JS42]
Length = 313
Score = 38.2 bits (87), Expect = 0.38, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 45/123 (36%), Gaps = 11/123 (8%)
Query: 40 LQEQFSSSV---GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR- 95
+ + + FD+ S ++P +L +G+ L + + GH D +
Sbjct: 156 TPDGLQIQIVDDQNRPMFDSGSALVKPYMRDILHQIGAALGGVENRISLSGHTDAVPYGN 215
Query: 96 ----NSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAI 150
S+ L RA A VA G+ +++ +V + A A NRR
Sbjct: 216 GDRGYSNWELSADRANASRRELVAAGMPDAKLGRVVGMAASDLLEP-QNPRA-AVNRRIT 273
Query: 151 VFL 153
+ +
Sbjct: 274 ITV 276
>gi|313500883|gb|ADR62249.1| MotB [Pseudomonas putida BIRD-1]
Length = 346
Score = 38.2 bits (87), Expect = 0.39, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 44/142 (30%), Gaps = 10/142 (7%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ ++ + Q+ + D FD S ++P +L + ++
Sbjct: 136 NPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDIGSARLQPYFEDILLAMADTIKAVPN 195
Query: 82 DFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVY 136
I GH D + L RA A VA G ++ +V Y
Sbjct: 196 KISISGHTDAKPYAGTGEYGNWELSANRANAARRALVAGGYPDGQVARVVGYASSS-LFD 254
Query: 137 GHDEDAYAKNRRAIVFLKGCRA 158
D NRR + + +A
Sbjct: 255 RKDPFN-PVNRRIDIIVLTKKA 275
>gi|213647163|ref|ZP_03377216.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
Length = 275
Score = 38.2 bits (87), Expect = 0.39, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS-----RNSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 118 QIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNGIPNRISLAGHTDDFPYANGEKGYSN 177
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A VA G+ + ++V M +D A NRR + + +
Sbjct: 178 WELSADRANASRRELVAGGLDNGKVLRVVGMAATMRLSDRGPDD--AINRRISLLVLNKQ 235
Query: 158 A 158
A
Sbjct: 236 A 236
>gi|116620375|ref|YP_822531.1| OmpA/MotB domain-containing protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116223537|gb|ABJ82246.1| OmpA/MotB domain protein [Candidatus Solibacter usitatus Ellin6076]
Length = 237
Score = 38.2 bits (87), Expect = 0.39, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 44/115 (38%), Gaps = 14/115 (12%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAY-- 107
+FF + S + A ++L L + + +IEGH D RN+ A G
Sbjct: 123 QGMFFVSGSPAPTRAGEELLRVLAREIGRLPNSLVIEGHTDAKPFRNARPAEGYSNWELA 182
Query: 108 -----AVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAY--AKNRRAIVFLK 154
A G+ ++ +V + + P +E A+NRR V +K
Sbjct: 183 ADRANAARRLLHLFGVRPEQVVEVRGFADQKPF----NERDRFDARNRRVSVVVK 233
>gi|115522545|ref|YP_779456.1| OmpA/MotB domain-containing protein [Rhodopseudomonas palustris
BisA53]
gi|115516492|gb|ABJ04476.1| OmpA/MotB domain protein [Rhodopseudomonas palustris BisA53]
Length = 628
Score = 38.2 bits (87), Expect = 0.39, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 52/128 (40%), Gaps = 8/128 (6%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-----FL 84
S D + S++++ S +++ F++ S+ I P L + L + FL
Sbjct: 479 SLDEIRYSPSVRQRMPSIDLNTITFESGSWDIAPDQALKLQAIADGLNRAIERNPREVFL 538
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAY 143
IEGH D G+ +++L RRA + + + YG++ V +
Sbjct: 539 IEGHTDATGNDTDNLSLSDRRAESAAALLTQQFGVPAENLTSQGYGEQYLKVPTQGPEL- 597
Query: 144 AKNRRAIV 151
NRR V
Sbjct: 598 -ANRRVTV 604
>gi|222112258|ref|YP_002554522.1| ompa/motb domain-containing protein [Acidovorax ebreus TPSY]
gi|221731702|gb|ACM34522.1| OmpA/MotB domain protein [Acidovorax ebreus TPSY]
Length = 313
Score = 38.2 bits (87), Expect = 0.40, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 45/123 (36%), Gaps = 11/123 (8%)
Query: 40 LQEQFSSSV---GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR- 95
+ + + FD+ S ++P +L +G+ L + + GH D +
Sbjct: 156 TPDGLQIQIVDDQNRPMFDSGSALVKPYMRDILHQIGAALGGVENRISLSGHTDAVPYGN 215
Query: 96 ----NSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAI 150
S+ L RA A VA G+ +++ +V + A A NRR
Sbjct: 216 GDRGYSNWELSADRANASRRELVAAGMPDAKLGRVVGMAASDLLEP-QNPRA-AVNRRIT 273
Query: 151 VFL 153
+ +
Sbjct: 274 ITV 276
>gi|239816686|ref|YP_002945596.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
gi|239803263|gb|ACS20330.1| OmpA/MotB domain protein [Variovorax paradoxus S110]
Length = 401
Score = 38.2 bits (87), Expect = 0.41, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 40/100 (40%), Gaps = 2/100 (2%)
Query: 61 IRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFV-ARGIS 119
I A L + + D ++ GH GS + + L L+RA +V V
Sbjct: 302 ISAAYPMWLRQIARQAAQIDSCVVVTGHTSRTGSESVNERLSLQRALSVKTRLVGEAPPL 361
Query: 120 ASRMKVTSYGKEMPSV-YGHDEDAYAKNRRAIVFLKGCRA 158
+ +++ + G V G D+ + A +RR + C A
Sbjct: 362 SKKLRESGMGFRENIVGTGADDASDALDRRVEFKVAPCEA 401
>gi|223039685|ref|ZP_03609971.1| putative chemotaxis protein MotB [Campylobacter rectus RM3267]
gi|222879068|gb|EEF14163.1| putative chemotaxis protein MotB [Campylobacter rectus RM3267]
Length = 369
Score = 38.2 bits (87), Expect = 0.41, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 14/123 (11%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK----------HDCDFLIEGHADELGS 94
S+ +S+ FDT SY ++ L + + H +IEGH + +GS
Sbjct: 224 VVSLPESILFDTGSYELKDEAKVRLKEILQTYFEAILNSEEIIKHIDRIVIEGHTNSVGS 283
Query: 95 RNSSIALGLRRAYAVFNYFVARGIS---ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
++ L +RAY+V ++ + + + + ED A RR +
Sbjct: 284 YMYNLDLSQKRAYSVLDFIYSWNKDKRLERYLIASGRSFSDLVIKNGKEDPDAS-RRIEI 342
Query: 152 FLK 154
+
Sbjct: 343 KIS 345
>gi|242238952|ref|YP_002987133.1| flagellar motor protein MotB [Dickeya dadantii Ech703]
gi|242131009|gb|ACS85311.1| OmpA/MotB domain protein [Dickeya dadantii Ech703]
Length = 377
Score = 38.2 bits (87), Expect = 0.42, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 40/121 (33%), Gaps = 7/121 (5%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 147 QIIDSNNRPMFKTGSAQVEPYMSDILRAIAPILNDIPNKISLSGHTDDARYATGERGYSN 206
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A +A G++ + ++V M D A NRR + + +
Sbjct: 207 WELSADRANASRRELIAGGLTEGKVLRVVGMADTMNLKQAKDGSD-AINRRISLVVLNKQ 265
Query: 158 A 158
A
Sbjct: 266 A 266
>gi|322384989|ref|ZP_08058639.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus cristatus ATCC
51100]
gi|321270899|gb|EFX53809.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus cristatus ATCC
51100]
Length = 260
Score = 37.9 bits (86), Expect = 0.42, Method: Composition-based stats.
Identities = 13/110 (11%), Positives = 37/110 (33%), Gaps = 5/110 (4%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFS----SSVGDSVFFDT 56
M+Y+ + + ++ ++S T+ S+ + E+ + ++
Sbjct: 1 MKYNKLIFLAMSVLVLSACSAAKDKTESSTNKQTSSSKVSVEKKEAEKDQASSQDTRSES 60
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
S + Q + + + + + ++G DE+ N L
Sbjct: 61 DSAESKKEQKQDV-TVDKNVSYNGSYYSVQGKYDEIVIANKHYPLSADYN 109
>gi|260868487|ref|YP_003234889.1| MotB protein [Escherichia coli O111:H- str. 11128]
gi|257764843|dbj|BAI36338.1| MotB protein [Escherichia coli O111:H- str. 11128]
gi|323180688|gb|EFZ66233.1| chemotaxis protein motB [Escherichia coli 1180]
Length = 308
Score = 37.9 bits (86), Expect = 0.42, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 151 QIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSN 210
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A + G+ + + ++V M +D A NRR + + +
Sbjct: 211 WELSADRANASRRELMVGGLDSGKVLRVVGMAATMRLSDRGPDD--AVNRRISLLVLNKQ 268
Query: 158 A 158
A
Sbjct: 269 A 269
>gi|222081460|ref|YP_002540823.1| hypothetical protein Arad_7805 [Agrobacterium radiobacter K84]
gi|221726139|gb|ACM29228.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 199
Score = 37.9 bits (86), Expect = 0.43, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 36/105 (34%), Gaps = 6/105 (5%)
Query: 52 VFFDTSSYSIRPADIQVLSNLG---SWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYA 108
+ F S +I P + L + FLI GHA G + L +RA A
Sbjct: 88 IDFQNDSVAIEPRSYRTLGLIADALHHPNLWAYKFLIVGHASATGGDKHNFELSSKRADA 147
Query: 109 VFNYF-VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
+ + + R+ G+ P A NRR +F
Sbjct: 148 IKEALATTFAVDSERLYAVGVGEYFPIDAAK--ADAADNRRVQLF 190
>gi|157145319|ref|YP_001452639.1| flagellar motor protein MotB [Citrobacter koseri ATCC BAA-895]
gi|157082524|gb|ABV12202.1| hypothetical protein CKO_01059 [Citrobacter koseri ATCC BAA-895]
Length = 308
Score = 37.9 bits (86), Expect = 0.43, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 39/121 (32%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 151 QIIDSQNRPMFKTGSAEVEPYMRDILRGIAPVLNGIPNRISLSGHTDDFPYASGERGYSN 210
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A V G+ + ++V M +D A NRR + + +
Sbjct: 211 WELSADRANASRRELVVGGLDDGKVLRVVGMAATMRLSDRGPDD--AINRRISLLVLNKQ 268
Query: 158 A 158
A
Sbjct: 269 A 269
>gi|74311761|ref|YP_310180.1| flagellar motor protein MotB [Shigella sonnei Ss046]
gi|73855238|gb|AAZ87945.1| MotB [Shigella sonnei Ss046]
Length = 308
Score = 37.9 bits (86), Expect = 0.43, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 151 QIIDSQNRPMFRTGSADVEPYMRDILRVIAPVLNGIPNRISLSGHTDDFPYASGEKGYSN 210
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A + G+ + + ++V M +D A NRR + + +
Sbjct: 211 WELSADRANASRRELMVGGLDSGKVLRVVGMAATMRLSDRGPDD--AVNRRISLLVLNKQ 268
Query: 158 A 158
A
Sbjct: 269 A 269
>gi|296534172|ref|ZP_06896663.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296265499|gb|EFH11633.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 157
Score = 37.9 bits (86), Expect = 0.43, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 40/115 (34%), Gaps = 6/115 (5%)
Query: 43 QFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR----NSS 98
Q + G VF T + +L + + L + I GH D R S+
Sbjct: 33 QLVDADGQPVF-ATGQAAPNQRGRALLLRVATVLARLPYGLDIAGHTDAAPFRGGGDRSN 91
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA A + GI+ R++ + + + A NRR + +
Sbjct: 92 WELSAERAGAARRVLIEAGIAEERLRAVAGRADRDLLSPDRPLD-AANRRVSILV 145
>gi|325981670|ref|YP_004294072.1| OmpA/MotB domain-containing protein [Nitrosomonas sp. AL212]
gi|325531189|gb|ADZ25910.1| OmpA/MotB domain protein [Nitrosomonas sp. AL212]
Length = 312
Score = 37.9 bits (86), Expect = 0.43, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 41/127 (32%), Gaps = 20/127 (15%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F ++P +L +G L + + GH D S+
Sbjct: 162 QIVDEQNRPMFALGRAELQPYTRTILREIGKMLNEVTNKISLSGHTDAKPFPSGDKGYSN 221
Query: 99 IALGLRRAYAVFNYFVARGISASRM-KVTS------YGKEMPSVYGHDEDAYAKNRRAIV 151
L RA A + G+ A++M +V + K+ P NRR +
Sbjct: 222 WELSADRANASRRELIVGGMDANKMLQVVGLSSAVLFDKDDPLNP--------INRRISI 273
Query: 152 FLKGCRA 158
+ +A
Sbjct: 274 VVMNEKA 280
>gi|197285528|ref|YP_002151400.1| motility protein B [Proteus mirabilis HI4320]
gi|227356023|ref|ZP_03840414.1| flagellar motor protein MotB [Proteus mirabilis ATCC 29906]
gi|194683015|emb|CAR43481.1| chemotaxis protein (motility protein B) [Proteus mirabilis HI4320]
gi|227163800|gb|EEI48708.1| flagellar motor protein MotB [Proteus mirabilis ATCC 29906]
Length = 349
Score = 37.9 bits (86), Expect = 0.43, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 46/124 (37%), Gaps = 13/124 (10%)
Query: 40 LQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS-- 94
+ E + D F S ++ P +L+ + L + GH D++
Sbjct: 141 MDEGLRIQIIDKESRPMFKVGSATVEPYMKDILTAIAPILNDSPYKISLSGHTDDIPYAS 200
Query: 95 ---RNSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYA-KNRRA 149
+ S+ L RA A + G++ + ++V + V ED +A NRR
Sbjct: 201 GALKYSNWELSTDRANASRRELIGAGLAEWKVLRVVGMASTVHLVK---EDGFAPANRRI 257
Query: 150 IVFL 153
+ +
Sbjct: 258 SILV 261
>gi|261340281|ref|ZP_05968139.1| chemotaxis MotB protein [Enterobacter cancerogenus ATCC 35316]
gi|288317370|gb|EFC56308.1| chemotaxis MotB protein [Enterobacter cancerogenus ATCC 35316]
Length = 309
Score = 37.9 bits (86), Expect = 0.43, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS-----RNSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 152 QIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNGIPNRVSLSGHTDDFPYANGEKGYSN 211
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A VA G+ + ++V M +D A NRR + + +
Sbjct: 212 WELSADRANASRRELVAGGLDDGKVLRVVGMAATMRLTDRGPDD--AINRRISLLVLNQQ 269
Query: 158 A 158
A
Sbjct: 270 A 270
>gi|167035946|ref|YP_001671177.1| flagellar motor protein MotB [Pseudomonas putida GB-1]
gi|166862434|gb|ABZ00842.1| OmpA/MotB domain protein [Pseudomonas putida GB-1]
Length = 350
Score = 37.9 bits (86), Expect = 0.43, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 44/142 (30%), Gaps = 10/142 (7%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ ++ + Q+ + D FD S ++P +L + ++
Sbjct: 136 NPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDIGSARLQPYFEDILLAMADTIKAVPN 195
Query: 82 DFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVY 136
I GH D + L RA A VA G ++ +V Y
Sbjct: 196 KISISGHTDAKPYAGTGEFGNWELSANRANAARRALVAGGYPDGQVARVVGYASSS-LFD 254
Query: 137 GHDEDAYAKNRRAIVFLKGCRA 158
D NRR + + +A
Sbjct: 255 RKDPFN-PVNRRIDIIVLTKKA 275
>gi|290953318|ref|ZP_06557939.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
holarctica URFT1]
gi|295313451|ref|ZP_06804053.1| peptidoglycan-associated lipoprotein [Francisella tularensis subsp.
holarctica URFT1]
Length = 108
Score = 37.9 bits (86), Expect = 0.44, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 19/88 (21%)
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY------ 136
+ G+ D GS + LG +RA AV+NY + + ++ ++ V SYGK P+
Sbjct: 10 IKLSGNTDPRGSEKYNFNLGQKRAEAVYNYLLGKNVNKDQICVVSYGKLKPAAEPTQFYD 69
Query: 137 -------GH------DEDAYAKNRRAIV 151
E A+ +RR +
Sbjct: 70 EFCKDGVNDACMYKASEKAFYLDRRTEI 97
>gi|213865315|ref|ZP_03387434.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
Length = 56
Score = 37.9 bits (86), Expect = 0.44, Method: Composition-based stats.
Identities = 8/48 (16%), Positives = 17/48 (35%), Gaps = 9/48 (18%)
Query: 119 SASRMKVTSYGKEMPSVYGHDE---------DAYAKNRRAIVFLKGCR 157
+ ++ G+ P + D A +RR + +KG +
Sbjct: 1 PSDKISARGMGESNPVTGNTCDNVKPRAALIDCLAPDRRVEIEVKGVK 48
>gi|194434087|ref|ZP_03066356.1| chemotaxis protein MotB [Shigella dysenteriae 1012]
gi|300951513|ref|ZP_07165348.1| chemotaxis protein MotB [Escherichia coli MS 116-1]
gi|194417631|gb|EDX33731.1| chemotaxis protein MotB [Shigella dysenteriae 1012]
gi|300449263|gb|EFK12883.1| chemotaxis protein MotB [Escherichia coli MS 116-1]
gi|332095082|gb|EGJ00116.1| chemotaxis protein motB [Shigella dysenteriae 155-74]
Length = 308
Score = 37.9 bits (86), Expect = 0.44, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 151 QIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSN 210
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A + G+ + + ++V M +D A NRR + + +
Sbjct: 211 WELSADRANASRRELMVGGVDSGKVLRVVGMAATMRLSDRGPDD--AVNRRISLLVLNKQ 268
Query: 158 A 158
A
Sbjct: 269 A 269
>gi|209919315|ref|YP_002293399.1| flagellar motor protein MotB [Escherichia coli SE11]
gi|218554477|ref|YP_002387390.1| flagellar motor protein MotB [Escherichia coli IAI1]
gi|209912574|dbj|BAG77648.1| chemotaxis protein MotB [Escherichia coli SE11]
gi|218361245|emb|CAQ98829.1| protein that enables flagellar motor rotation [Escherichia coli
IAI1]
gi|324017971|gb|EGB87190.1| chemotaxis protein MotB [Escherichia coli MS 117-3]
Length = 308
Score = 37.9 bits (86), Expect = 0.45, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 151 QIIDSQNRPMFKTGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSN 210
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A + G+ + + ++V M +D A NRR + + +
Sbjct: 211 WELSADRANASRRELMVGGLDSGKVLRVVGMAATMRLSDRGPDD--AVNRRISLLVLNKQ 268
Query: 158 A 158
A
Sbjct: 269 A 269
>gi|323165315|gb|EFZ51103.1| chemotaxis protein motB [Shigella sonnei 53G]
Length = 275
Score = 37.9 bits (86), Expect = 0.45, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 118 QIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSN 177
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A + G+ + + ++V M +D A NRR + + +
Sbjct: 178 WELSADRANASRRELMVGGLDSGKVLRVVGMAATMRLSDRGPDD--AVNRRISLLVLNKQ 235
Query: 158 A 158
A
Sbjct: 236 A 236
>gi|320177401|gb|EFW52402.1| Flagellar motor rotation protein MotB [Shigella dysenteriae CDC
74-1112]
Length = 308
Score = 37.9 bits (86), Expect = 0.45, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 151 QIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSN 210
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A + G+ + + ++V M +D A NRR + + +
Sbjct: 211 WELSADRANASRRELMVGGLDSGKVLRVVGMAATMRLSDRGPDD--AVNRRISLLVLNKQ 268
Query: 158 A 158
A
Sbjct: 269 A 269
>gi|313650105|gb|EFS14518.1| chemotaxis protein motB [Shigella flexneri 2a str. 2457T]
gi|332756040|gb|EGJ86393.1| chemotaxis protein motB [Shigella flexneri 4343-70]
gi|333017760|gb|EGK37067.1| chemotaxis protein motB [Shigella flexneri K-227]
Length = 275
Score = 37.9 bits (86), Expect = 0.45, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 118 QIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSN 177
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A + G+ + + ++V M +D A NRR + + +
Sbjct: 178 WELSADRANASRRELMVGGLDSGKVLRVVGMAATMRLSDRGPDD--AVNRRISLLVLNKQ 235
Query: 158 A 158
A
Sbjct: 236 A 236
>gi|256022446|ref|ZP_05436311.1| flagellar motor protein MotB [Escherichia sp. 4_1_40B]
gi|300917528|ref|ZP_07134185.1| chemotaxis protein MotB [Escherichia coli MS 115-1]
gi|300415233|gb|EFJ98543.1| chemotaxis protein MotB [Escherichia coli MS 115-1]
Length = 308
Score = 37.9 bits (86), Expect = 0.45, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 151 QIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSN 210
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A + G+ + + ++V M +D A NRR + + +
Sbjct: 211 WELSADRANASRRELMVGGLDSGKVLRVVGMAATMRLSDRGPDD--AVNRRISLLVLNKQ 268
Query: 158 A 158
A
Sbjct: 269 A 269
>gi|323158625|gb|EFZ44639.1| chemotaxis protein motB [Escherichia coli E128010]
Length = 275
Score = 37.9 bits (86), Expect = 0.45, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 118 QIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSN 177
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A + G+ + + ++V M +D A NRR + + +
Sbjct: 178 WELSADRANASRRELMVGGLDSGKVLRVVGMAATMRLSDRGPDD--AVNRRISLLVLNKQ 235
Query: 158 A 158
A
Sbjct: 236 A 236
>gi|331663388|ref|ZP_08364298.1| chemotaxis protein MotB [Escherichia coli TA143]
gi|331059187|gb|EGI31164.1| chemotaxis protein MotB [Escherichia coli TA143]
Length = 366
Score = 37.9 bits (86), Expect = 0.46, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 209 QIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSN 268
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A + G+ + + ++V M +D A NRR + + +
Sbjct: 269 WELSADRANASRRELMVGGLDSGKVLRVVGMAATMRLSDRGPDD--AVNRRISLLVLNKQ 326
Query: 158 A 158
A
Sbjct: 327 A 327
>gi|331673414|ref|ZP_08374182.1| chemotaxis protein MotB [Escherichia coli TA280]
gi|331069612|gb|EGI40999.1| chemotaxis protein MotB [Escherichia coli TA280]
Length = 308
Score = 37.9 bits (86), Expect = 0.46, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 151 QIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSN 210
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A + G+ + + ++V M +D A NRR + + +
Sbjct: 211 WELSADRANASRRELMVGGLDSGKVLRVVGMAATMRLSDRGPDD--AVNRRISLLVLNKQ 268
Query: 158 A 158
A
Sbjct: 269 A 269
>gi|15802301|ref|NP_288326.1| flagellar motor protein MotB [Escherichia coli O157:H7 EDL933]
gi|15831853|ref|NP_310626.1| flagellar motor protein MotB [Escherichia coli O157:H7 str. Sakai]
gi|16129841|ref|NP_416403.1| protein that enables flagellar motor rotation [Escherichia coli
str. K-12 substr. MG1655]
gi|89108729|ref|AP_002509.1| protein that enables flagellar motor rotation [Escherichia coli
str. K-12 substr. W3110]
gi|157158423|ref|YP_001463195.1| flagellar motor protein MotB [Escherichia coli E24377A]
gi|157161361|ref|YP_001458679.1| flagellar motor protein MotB [Escherichia coli HS]
gi|168757929|ref|ZP_02782936.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4401]
gi|168762313|ref|ZP_02787320.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4501]
gi|168770876|ref|ZP_02795883.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4486]
gi|168776560|ref|ZP_02801567.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4196]
gi|168783193|ref|ZP_02808200.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4076]
gi|168789758|ref|ZP_02814765.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC869]
gi|168801871|ref|ZP_02826878.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC508]
gi|170019766|ref|YP_001724720.1| flagellar motor protein MotB [Escherichia coli ATCC 8739]
gi|170081544|ref|YP_001730864.1| hypothetical protein ECDH10B_2030 [Escherichia coli str. K-12
substr. DH10B]
gi|170684155|ref|YP_001743353.1| flagellar motor protein MotB [Escherichia coli SMS-3-5]
gi|188492393|ref|ZP_02999663.1| chemotaxis protein MotB [Escherichia coli 53638]
gi|191168098|ref|ZP_03029897.1| chemotaxis protein MotB [Escherichia coli B7A]
gi|193065441|ref|ZP_03046510.1| chemotaxis protein MotB [Escherichia coli E22]
gi|193069870|ref|ZP_03050819.1| chemotaxis protein MotB [Escherichia coli E110019]
gi|194429327|ref|ZP_03061853.1| chemotaxis protein MotB [Escherichia coli B171]
gi|194439077|ref|ZP_03071160.1| chemotaxis protein MotB [Escherichia coli 101-1]
gi|195939593|ref|ZP_03084975.1| flagellar motor protein MotB [Escherichia coli O157:H7 str. EC4024]
gi|208810604|ref|ZP_03252480.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4206]
gi|208816679|ref|ZP_03257799.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4045]
gi|208819881|ref|ZP_03260201.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4042]
gi|209397424|ref|YP_002270973.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4115]
gi|217329015|ref|ZP_03445096.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. TW14588]
gi|218695455|ref|YP_002403122.1| flagellar motor protein MotB [Escherichia coli 55989]
gi|218705389|ref|YP_002412908.1| flagellar motor protein MotB [Escherichia coli UMN026]
gi|238901104|ref|YP_002926900.1| protein that enables flagellar motor rotation [Escherichia coli
BW2952]
gi|253773154|ref|YP_003035985.1| flagellar motor protein MotB [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254161949|ref|YP_003045057.1| flagellar motor protein MotB [Escherichia coli B str. REL606]
gi|254793513|ref|YP_003078350.1| flagellar motor protein MotB [Escherichia coli O157:H7 str.
TW14359]
gi|256017907|ref|ZP_05431772.1| flagellar motor protein MotB [Shigella sp. D9]
gi|260844299|ref|YP_003222077.1| MotB protein [Escherichia coli O103:H2 str. 12009]
gi|260855829|ref|YP_003229720.1| MotB protein [Escherichia coli O26:H11 str. 11368]
gi|261227610|ref|ZP_05941891.1| protein that enables flagellar motor rotation [Escherichia coli
O157:H7 str. FRIK2000]
gi|261258224|ref|ZP_05950757.1| MotB protein [Escherichia coli O157:H7 str. FRIK966]
gi|291283071|ref|YP_003499889.1| Chemotaxis protein motB [Escherichia coli O55:H7 str. CB9615]
gi|293405381|ref|ZP_06649373.1| motB [Escherichia coli FVEC1412]
gi|293446276|ref|ZP_06662698.1| chemotaxis protein MotB [Escherichia coli B088]
gi|297517349|ref|ZP_06935735.1| flagellar motor protein MotB [Escherichia coli OP50]
gi|298381025|ref|ZP_06990624.1| chemotaxis protein motB [Escherichia coli FVEC1302]
gi|300819874|ref|ZP_07100059.1| chemotaxis protein MotB [Escherichia coli MS 107-1]
gi|300822336|ref|ZP_07102477.1| chemotaxis protein MotB [Escherichia coli MS 119-7]
gi|300899142|ref|ZP_07117423.1| chemotaxis protein MotB [Escherichia coli MS 198-1]
gi|300924982|ref|ZP_07140907.1| chemotaxis protein MotB [Escherichia coli MS 182-1]
gi|300928923|ref|ZP_07144427.1| chemotaxis protein MotB [Escherichia coli MS 187-1]
gi|300956597|ref|ZP_07168876.1| chemotaxis protein MotB [Escherichia coli MS 175-1]
gi|301029341|ref|ZP_07192438.1| chemotaxis protein MotB [Escherichia coli MS 196-1]
gi|301327680|ref|ZP_07220887.1| chemotaxis protein MotB [Escherichia coli MS 78-1]
gi|301645593|ref|ZP_07245522.1| chemotaxis protein MotB [Escherichia coli MS 146-1]
gi|307138554|ref|ZP_07497910.1| flagellar motor protein MotB [Escherichia coli H736]
gi|307314199|ref|ZP_07593809.1| OmpA/MotB domain protein [Escherichia coli W]
gi|309796000|ref|ZP_07690413.1| chemotaxis protein MotB [Escherichia coli MS 145-7]
gi|312969933|ref|ZP_07784116.1| chemotaxis protein motB [Escherichia coli 1827-70]
gi|331642507|ref|ZP_08343642.1| chemotaxis protein MotB [Escherichia coli H736]
gi|331653299|ref|ZP_08354304.1| chemotaxis protein MotB [Escherichia coli M718]
gi|331668586|ref|ZP_08369434.1| chemotaxis protein MotB [Escherichia coli TA271]
gi|331677774|ref|ZP_08378449.1| chemotaxis protein MotB [Escherichia coli H591]
gi|332278938|ref|ZP_08391351.1| flagellar motor rotation protein [Shigella sp. D9]
gi|84028148|sp|P0AF07|MOTB_ECO57 RecName: Full=Motility protein B; AltName: Full=Chemotaxis protein
MotB
gi|84028149|sp|P0AF06|MOTB_ECOLI RecName: Full=Motility protein B; AltName: Full=Chemotaxis protein
MotB
gi|12515953|gb|AAG56879.1|AE005411_3 enables flagellar motor rotation, linking torque machinery to cell
wall [Escherichia coli O157:H7 str. EDL933]
gi|146883|gb|AAA24178.1| chemotaxis protein MotB [Escherichia coli]
gi|1736548|dbj|BAA15710.1| protein that enables flagellar motor rotation [Escherichia coli
str. K12 substr. W3110]
gi|1788198|gb|AAC74959.1| protein that enables flagellar motor rotation [Escherichia coli
str. K-12 substr. MG1655]
gi|13362067|dbj|BAB36022.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. Sakai]
gi|157067041|gb|ABV06296.1| chemotaxis protein MotB [Escherichia coli HS]
gi|157080453|gb|ABV20161.1| chemotaxis protein MotB [Escherichia coli E24377A]
gi|169754694|gb|ACA77393.1| OmpA/MotB domain protein [Escherichia coli ATCC 8739]
gi|169889379|gb|ACB03086.1| MotB [Escherichia coli str. K-12 substr. DH10B]
gi|170521873|gb|ACB20051.1| chemotaxis protein MotB [Escherichia coli SMS-3-5]
gi|187768100|gb|EDU31944.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4196]
gi|188487592|gb|EDU62695.1| chemotaxis protein MotB [Escherichia coli 53638]
gi|188999462|gb|EDU68448.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4076]
gi|189355159|gb|EDU73578.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4401]
gi|189360307|gb|EDU78726.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4486]
gi|189367322|gb|EDU85738.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4501]
gi|189370705|gb|EDU89121.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC869]
gi|189376024|gb|EDU94440.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC508]
gi|190901896|gb|EDV61646.1| chemotaxis protein MotB [Escherichia coli B7A]
gi|192926846|gb|EDV81471.1| chemotaxis protein MotB [Escherichia coli E22]
gi|192956770|gb|EDV87224.1| chemotaxis protein MotB [Escherichia coli E110019]
gi|194412634|gb|EDX28930.1| chemotaxis protein MotB [Escherichia coli B171]
gi|194422036|gb|EDX38040.1| chemotaxis protein MotB [Escherichia coli 101-1]
gi|208725120|gb|EDZ74827.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4206]
gi|208731022|gb|EDZ79711.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4045]
gi|208740004|gb|EDZ87686.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4042]
gi|209158824|gb|ACI36257.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. EC4115]
gi|209767220|gb|ACI81922.1| chemotaxis protein MotB [Escherichia coli]
gi|209767222|gb|ACI81923.1| chemotaxis protein MotB [Escherichia coli]
gi|209767224|gb|ACI81924.1| chemotaxis protein MotB [Escherichia coli]
gi|209767226|gb|ACI81925.1| chemotaxis protein MotB [Escherichia coli]
gi|217318362|gb|EEC26789.1| chemotaxis protein MotB [Escherichia coli O157:H7 str. TW14588]
gi|218352187|emb|CAU97928.1| protein that enables flagellar motor rotation [Escherichia coli
55989]
gi|218432486|emb|CAR13379.1| protein that enables flagellar motor rotation [Escherichia coli
UMN026]
gi|238863319|gb|ACR65317.1| protein that enables flagellar motor rotation [Escherichia coli
BW2952]
gi|242377610|emb|CAQ32366.1| MotB protein, enables flagellar motor rotation, linking torque
machinery to cell wall, subunit of Flagellar Motor
Complex and Flagellum [Escherichia coli BL21(DE3)]
gi|253324198|gb|ACT28800.1| OmpA/MotB domain protein [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|253973850|gb|ACT39521.1| flagellar motor protein MotB [Escherichia coli B str. REL606]
gi|253978044|gb|ACT43714.1| flagellar motor protein MotB [Escherichia coli BL21(DE3)]
gi|254592913|gb|ACT72274.1| protein that enables flagellar motor rotation [Escherichia coli
O157:H7 str. TW14359]
gi|257754478|dbj|BAI25980.1| MotB protein [Escherichia coli O26:H11 str. 11368]
gi|257759446|dbj|BAI30943.1| MotB protein [Escherichia coli O103:H2 str. 12009]
gi|260448988|gb|ACX39410.1| OmpA/MotB domain protein [Escherichia coli DH1]
gi|290762944|gb|ADD56905.1| Chemotaxis protein motB [Escherichia coli O55:H7 str. CB9615]
gi|291323106|gb|EFE62534.1| chemotaxis protein MotB [Escherichia coli B088]
gi|291427589|gb|EFF00616.1| motB [Escherichia coli FVEC1412]
gi|298278467|gb|EFI19981.1| chemotaxis protein motB [Escherichia coli FVEC1302]
gi|299877767|gb|EFI85978.1| chemotaxis protein MotB [Escherichia coli MS 196-1]
gi|300316579|gb|EFJ66363.1| chemotaxis protein MotB [Escherichia coli MS 175-1]
gi|300357232|gb|EFJ73102.1| chemotaxis protein MotB [Escherichia coli MS 198-1]
gi|300418857|gb|EFK02168.1| chemotaxis protein MotB [Escherichia coli MS 182-1]
gi|300463077|gb|EFK26570.1| chemotaxis protein MotB [Escherichia coli MS 187-1]
gi|300525219|gb|EFK46288.1| chemotaxis protein MotB [Escherichia coli MS 119-7]
gi|300527571|gb|EFK48633.1| chemotaxis protein MotB [Escherichia coli MS 107-1]
gi|300845775|gb|EFK73535.1| chemotaxis protein MotB [Escherichia coli MS 78-1]
gi|301076125|gb|EFK90931.1| chemotaxis protein MotB [Escherichia coli MS 146-1]
gi|306906168|gb|EFN36686.1| OmpA/MotB domain protein [Escherichia coli W]
gi|308120450|gb|EFO57712.1| chemotaxis protein MotB [Escherichia coli MS 145-7]
gi|309702112|emb|CBJ01427.1| chemotaxis protein MotB (motility protein B) [Escherichia coli ETEC
H10407]
gi|310338218|gb|EFQ03307.1| chemotaxis protein motB [Escherichia coli 1827-70]
gi|315061195|gb|ADT75522.1| protein that enables flagellar motor rotation [Escherichia coli W]
gi|315136532|dbj|BAJ43691.1| chemotaxis protein motB [Escherichia coli DH1]
gi|320188589|gb|EFW63251.1| Flagellar motor rotation protein MotB [Escherichia coli O157:H7
str. EC1212]
gi|320198585|gb|EFW73185.1| Flagellar motor rotation protein MotB [Escherichia coli EC4100B]
gi|320641743|gb|EFX11131.1| flagellar motor protein MotB [Escherichia coli O157:H7 str. G5101]
gi|320657987|gb|EFX25749.1| flagellar motor protein MotB [Escherichia coli O55:H7 str. 3256-97
TW 07815]
gi|320658560|gb|EFX26254.1| flagellar motor protein MotB [Escherichia coli O55:H7 str. USDA
5905]
gi|320668458|gb|EFX35285.1| flagellar motor protein MotB [Escherichia coli O157:H7 str. LSU-61]
gi|323152620|gb|EFZ38896.1| chemotaxis protein motB [Escherichia coli EPECa14]
gi|323174594|gb|EFZ60215.1| chemotaxis protein motB [Escherichia coli LT-68]
gi|323186334|gb|EFZ71684.1| chemotaxis protein motB [Escherichia coli 1357]
gi|323378228|gb|ADX50496.1| OmpA/MotB domain protein [Escherichia coli KO11]
gi|323937148|gb|EGB33428.1| OmpA family protein [Escherichia coli E1520]
gi|323940442|gb|EGB36633.1| OmpA family protein [Escherichia coli E482]
gi|323961944|gb|EGB57543.1| OmpA family protein [Escherichia coli H489]
gi|323972601|gb|EGB67804.1| OmpA family protein [Escherichia coli TA007]
gi|324118949|gb|EGC12838.1| OmpA family protein [Escherichia coli E1167]
gi|326342267|gb|EGD66048.1| Flagellar motor rotation protein MotB [Escherichia coli O157:H7
str. 1044]
gi|326343818|gb|EGD67580.1| Flagellar motor rotation protein MotB [Escherichia coli O157:H7
str. 1125]
gi|331039305|gb|EGI11525.1| chemotaxis protein MotB [Escherichia coli H736]
gi|331049397|gb|EGI21469.1| chemotaxis protein MotB [Escherichia coli M718]
gi|331063780|gb|EGI35691.1| chemotaxis protein MotB [Escherichia coli TA271]
gi|331074234|gb|EGI45554.1| chemotaxis protein MotB [Escherichia coli H591]
gi|332089624|gb|EGI94726.1| chemotaxis protein motB [Shigella boydii 5216-82]
gi|332101290|gb|EGJ04636.1| flagellar motor rotation protein [Shigella sp. D9]
gi|332343616|gb|AEE56950.1| chemotaxis protein MotB [Escherichia coli UMNK88]
Length = 308
Score = 37.9 bits (86), Expect = 0.46, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 151 QIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSN 210
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A + G+ + + ++V M +D A NRR + + +
Sbjct: 211 WELSADRANASRRELMVGGLDSGKVLRVVGMAATMRLSDRGPDD--AVNRRISLLVLNKQ 268
Query: 158 A 158
A
Sbjct: 269 A 269
>gi|261749326|ref|YP_003257011.1| outer membrane protein [Blattabacterium sp. (Periplaneta americana)
str. BPLAN]
gi|261497418|gb|ACX83868.1| outer membrane protein [Blattabacterium sp. (Periplaneta americana)
str. BPLAN]
Length = 408
Score = 37.9 bits (86), Expect = 0.46, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 47/105 (44%), Gaps = 11/105 (10%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWL--EKHDCDFLIEGHADELGSRNSSIALGLRRAYAV 109
+ FD +++ P ++++ + + + + F I G+ D G + + L RRA +V
Sbjct: 311 ILFDLGKFTLSPNSLEIIDEIYEIMIKKLPNSKFYINGYTDSYGKHSYNKILSTRRANSV 370
Query: 110 FNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
F V++GI SRM++ GK K R + ++
Sbjct: 371 FEALVSKGIDPSRMEIRKLGKS---------VKRNKGRLVEITIR 406
>gi|24113274|ref|NP_707784.1| flagellar motor protein MotB [Shigella flexneri 2a str. 301]
gi|30063341|ref|NP_837512.1| flagellar motor protein MotB [Shigella flexneri 2a str. 2457T]
gi|110805869|ref|YP_689389.1| flagellar motor protein MotB [Shigella flexneri 5 str. 8401]
gi|24052278|gb|AAN43491.1| chemotaxis protein MotB [Shigella flexneri 2a str. 301]
gi|30041593|gb|AAP17321.1| chemotaxis protein MotB [Shigella flexneri 2a str. 2457T]
gi|110615417|gb|ABF04084.1| flagellar motor protein [Shigella flexneri 5 str. 8401]
gi|281601336|gb|ADA74320.1| Chemotaxis protein MotB [Shigella flexneri 2002017]
gi|332757207|gb|EGJ87544.1| chemotaxis protein motB [Shigella flexneri 2747-71]
gi|332757449|gb|EGJ87784.1| chemotaxis protein motB [Shigella flexneri K-671]
gi|332766620|gb|EGJ96824.1| motB protein, enables flagellar motor rotation, linking torque
machinery to cell wall [Shigella flexneri 2930-71]
gi|333004150|gb|EGK23682.1| chemotaxis protein motB [Shigella flexneri K-272]
gi|333017634|gb|EGK36946.1| chemotaxis protein motB [Shigella flexneri K-304]
Length = 308
Score = 37.9 bits (86), Expect = 0.46, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 151 QIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSN 210
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A + G+ + + ++V M +D A NRR + + +
Sbjct: 211 WELSADRANASRRELMVGGLDSGKVLRVVGMAATMRLSDRGPDD--AVNRRISLLVLNKQ 268
Query: 158 A 158
A
Sbjct: 269 A 269
>gi|320178162|gb|EFW53139.1| Flagellar motor rotation protein MotB [Shigella boydii ATCC 9905]
Length = 308
Score = 37.9 bits (86), Expect = 0.46, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 151 QIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSN 210
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A + G+ + + ++V M +D A NRR + + +
Sbjct: 211 WELSADRANASRRELMVGGLDSGKVLRVVGMAATMRLSDRGPDD--AVNRRISLLVLNKQ 268
Query: 158 A 158
A
Sbjct: 269 A 269
>gi|293415204|ref|ZP_06657847.1| chemotaxis protein MotB [Escherichia coli B185]
gi|291432852|gb|EFF05831.1| chemotaxis protein MotB [Escherichia coli B185]
Length = 308
Score = 37.9 bits (86), Expect = 0.47, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 151 QIIDSQNRPMFKTGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSN 210
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A + G+ + + ++V M +D A NRR + + +
Sbjct: 211 WELSADRANASRRELMVGGLDSGKVLRVVGMAATMRLSDRGPDD--AVNRRISLLVLNKQ 268
Query: 158 A 158
A
Sbjct: 269 A 269
>gi|325271245|ref|ZP_08137790.1| flagellar motor protein MotB [Pseudomonas sp. TJI-51]
gi|324103648|gb|EGC00950.1| flagellar motor protein MotB [Pseudomonas sp. TJI-51]
Length = 340
Score = 37.9 bits (86), Expect = 0.47, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 44/142 (30%), Gaps = 10/142 (7%)
Query: 25 DTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ ++ + Q+ + D FD S ++P +L + ++
Sbjct: 136 NPQLQKFKDQILFEITQDGLRIQIMDAENRPMFDIGSARLQPYFEDILLAMADTIKAVPN 195
Query: 82 DFLIEGHADELGS----RNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVY 136
I GH D + L RA A VA G ++ +V Y
Sbjct: 196 KISISGHTDAKPYAGTGEFGNWELSANRANAARRALVAGGYPDGQVARVVGYASSS-LFD 254
Query: 137 GHDEDAYAKNRRAIVFLKGCRA 158
+ NRR + + +A
Sbjct: 255 RKNPFN-PVNRRIDIIVLTKKA 275
>gi|269963847|ref|ZP_06178160.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269831420|gb|EEZ85566.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 1563
Score = 37.9 bits (86), Expect = 0.47, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 50/130 (38%), Gaps = 13/130 (10%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHA 89
P+ V +S++ + G + F + ++ + L+ + + + IEGHA
Sbjct: 607 PNDVAEDSAMFVKDHKGAGLRLVFPFDNNQVQAPHLSYLAAVDKELSKIPNAVVEIEGHA 666
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN--- 146
+ G + L +RA V +F + + +G+ P V + + +N
Sbjct: 667 CQNGDSEYNQNLSQQRAQHVAEFFSSVSD------IRFFGERRPIVEVPNNEIKRENAQL 720
Query: 147 ---RRAIVFL 153
RR V +
Sbjct: 721 NINRRVEVRI 730
>gi|256830739|ref|YP_003159467.1| OmpA/MotB domain-containing protein [Desulfomicrobium baculatum DSM
4028]
gi|256579915|gb|ACU91051.1| OmpA/MotB domain protein [Desulfomicrobium baculatum DSM 4028]
Length = 295
Score = 37.9 bits (86), Expect = 0.47, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 38/129 (29%), Gaps = 9/129 (6%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLI---EG 87
D V +S + + + F+ S +R + L +G L +
Sbjct: 140 QDLVAVQSVPGKSLHVVLAGDLLFEKSRAVLRGDVKETLLAVGEILRSAPHALSVVGHAA 199
Query: 88 HADELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDE-DAYAK 145
L + A V ++ + RM V YG + P V G +
Sbjct: 200 PGGAAAGSRGPWELSVAMAADVADFLIRDAGLPAERMLVAGYGDQRPLVDGDGAGAGW-- 257
Query: 146 NRRAIVFLK 154
R + L
Sbjct: 258 --RVELVLS 264
>gi|153832073|ref|ZP_01984740.1| OmpA family protein [Vibrio harveyi HY01]
gi|148871688|gb|EDL70529.1| OmpA family protein [Vibrio harveyi HY01]
Length = 1563
Score = 37.9 bits (86), Expect = 0.47, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 50/130 (38%), Gaps = 13/130 (10%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHA 89
P+ V +S++ + G + F + ++ + L+ + + + IEGHA
Sbjct: 607 PNDVAEDSAMFVKDHKGAGLRLVFPFDNNQVQAPHLSYLAAVDKELSKIPNAVVEIEGHA 666
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN--- 146
+ G + L +RA V +F + + +G+ P V + + +N
Sbjct: 667 CQNGDSEYNQNLSQQRAQHVAEFFSSVSD------IRFFGERRPIVEVPNNEIKRENAQL 720
Query: 147 ---RRAIVFL 153
RR V +
Sbjct: 721 NINRRVEVRI 730
>gi|134095750|ref|YP_001100825.1| putative OmpA family protein [Herminiimonas arsenicoxydans]
gi|133739653|emb|CAL62704.1| Putative outer membrane protein OmpA [Herminiimonas arsenicoxydans]
Length = 225
Score = 37.9 bits (86), Expect = 0.47, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 44/106 (41%), Gaps = 10/106 (9%)
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
+ + + D +VL L I GH D LG+ S+ L +RA +V Y +
Sbjct: 120 NKAAKQQIDQKVLPILAECKGIDG--ITITGHTDHLGASRSNQILSEKRAASVAGYLKTK 177
Query: 117 GISASRMKVTSYGKEMPSVYGHDE-------DAYAKNRRAIVFLKG 155
G+ +++M V G+ ++ A NRR ++ + G
Sbjct: 178 GV-STKMNVLGAGETQGVKLCDEKLPHGKLIACLAPNRRVLIEVHG 222
>gi|330966673|gb|EGH66933.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 301
Score = 37.9 bits (86), Expect = 0.48, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
++GH+D G+R ++ L RRA AV +YF A+GI ++ + +G+ P
Sbjct: 207 NRIELDGHSDNSGNRLTNRDLSRRRALAVMDYFKAQGIPEQQITLRFHGERYPLAPNT 264
>gi|213024875|ref|ZP_03339322.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 189
Score = 37.9 bits (86), Expect = 0.48, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 32 QIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNGIPNRISLAGHTDDFPYANGEKGYSN 91
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A VA G+ + ++V M +D A NRR + + +
Sbjct: 92 WELSADRANASRRELVAGGLDNGKVLRVVGMAATMRLSDRGPDD--AINRRISLLVLNKQ 149
Query: 158 A 158
A
Sbjct: 150 A 150
>gi|254459054|ref|ZP_05072477.1| type I secretion outer membrane protein, TolC, putative
[Campylobacterales bacterium GD 1]
gi|207084325|gb|EDZ61614.1| type I secretion outer membrane protein, TolC, putative
[Campylobacterales bacterium GD 1]
Length = 604
Score = 37.9 bits (86), Expect = 0.48, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 42/109 (38%), Gaps = 4/109 (3%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDC---DFLIEGHA-DELGSRNSSIALGLRRAYA 108
F+ S ++ A L+ L + ++ + F + G+ DE + + L +RA
Sbjct: 495 LFEDGSANLTGAGQDRLNKLITQIQPYGWDNLKFDVLGNVEDEKMTEEQLLQLSQQRAET 554
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
+ G + + + S P +D+ N RA + ++ +
Sbjct: 555 IKTKLTEAGANVDFIVLHSKADTAPMFSNESDDSIELNNRADIIVRKLK 603
>gi|330826741|ref|YP_004390044.1| OmpA/MotB domain-containing protein [Alicycliphilus denitrificans
K601]
gi|329312113|gb|AEB86528.1| OmpA/MotB domain protein [Alicycliphilus denitrificans K601]
Length = 311
Score = 37.9 bits (86), Expect = 0.49, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 43/123 (34%), Gaps = 11/123 (8%)
Query: 40 LQEQFSSSV---GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR- 95
+ + + FD+ S ++P +L +G+ L + + GH D
Sbjct: 155 TPDGLQIQIVDDQNRPMFDSGSALVKPYMRDILREIGAALGSVENRISLAGHTDAAPYGN 214
Query: 96 ----NSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAI 150
S+ L RA A VA G+ +R+ +V + A NRR
Sbjct: 215 GDRGYSNWELSADRANASRRELVAAGMPDARLGRVVGLAASDLLEP-DNPRA-PVNRRIT 272
Query: 151 VFL 153
+ +
Sbjct: 273 ITV 275
>gi|183222494|ref|YP_001840490.1| hypothetical protein LEPBI_I3149 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189912532|ref|YP_001964087.1| OmpA-family lipoprotein [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167777208|gb|ABZ95509.1| OmpA-family lipoprotein [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167780916|gb|ABZ99214.1| Putative bacterial outer membrane protein; putative signal peptide
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 189
Score = 37.9 bits (86), Expect = 0.49, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
R+ A+ + V +GI A R+ + G P G DE A NRR +
Sbjct: 136 YSQIRSDAMKDALVKQGIPAERIVTKAAGSSKPI-SGFDEKD-AINRRVTFQV 186
>gi|209767218|gb|ACI81921.1| chemotaxis protein MotB [Escherichia coli]
gi|320647103|gb|EFX15936.1| flagellar motor protein MotB [Escherichia coli O157:H- str. 493-89]
gi|320652386|gb|EFX20684.1| flagellar motor protein MotB [Escherichia coli O157:H- str. H 2687]
Length = 308
Score = 37.9 bits (86), Expect = 0.50, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 151 QIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSN 210
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A + G+ + + ++V M +D A NRR + + +
Sbjct: 211 WELSADRANASRRELMVGGLDSGKVLRVVGMAATMRLSDRGPDD--AVNRRISLLVLNKQ 268
Query: 158 A 158
A
Sbjct: 269 A 269
>gi|330877334|gb|EGH11483.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
Length = 301
Score = 37.9 bits (86), Expect = 0.50, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
++GH+D G+R ++ L RRA AV +YF A+GI ++ + +G+ P
Sbjct: 207 NRIELDGHSDNSGNRLTNRDLSRRRALAVMDYFKAQGIPEQQITLRFHGERYPLAPNT 264
>gi|237743389|ref|ZP_04573870.1| lipoprotein [Fusobacterium sp. 7_1]
gi|229433168|gb|EEO43380.1| lipoprotein [Fusobacterium sp. 7_1]
Length = 419
Score = 37.9 bits (86), Expect = 0.51, Method: Composition-based stats.
Identities = 10/94 (10%), Positives = 22/94 (23%), Gaps = 2/94 (2%)
Query: 1 MQYSTIFIILSAITMMSIS-GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSY 59
M + I + A+ M+ I+ + + +S +G V S
Sbjct: 1 MNFKKILFSILAVFMLVIAVACGKKEAPTEDANAQQEAASEVATQDYHIG-IVTTSVSQS 59
Query: 60 SIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG 93
+ + + D
Sbjct: 60 EDNFRGAEAVLKQYGSSNDEGGKITVVTVPDNFM 93
>gi|116327318|ref|YP_797038.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
L550]
gi|116332067|ref|YP_801785.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
JB197]
gi|116120062|gb|ABJ78105.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
L550]
gi|116125756|gb|ABJ77027.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
JB197]
Length = 589
Score = 37.9 bits (86), Expect = 0.51, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 33/79 (41%)
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
E + ++ H+ G + RA F YF ++ + R++ YG+ +P V
Sbjct: 510 NEYPGYNIELQSHSSHQGDEEVNQVQTEERARDAFEYFFSKKVPFGRIRFRGYGETLPLV 569
Query: 136 YGHDEDAYAKNRRAIVFLK 154
G + KN+R +L
Sbjct: 570 PGSGKYEADKNQRIDFYLS 588
>gi|319764525|ref|YP_004128462.1| ompa/motb domain protein [Alicycliphilus denitrificans BC]
gi|317119086|gb|ADV01575.1| OmpA/MotB domain protein [Alicycliphilus denitrificans BC]
Length = 312
Score = 37.9 bits (86), Expect = 0.51, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 43/123 (34%), Gaps = 11/123 (8%)
Query: 40 LQEQFSSSV---GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR- 95
+ + + FD+ S ++P +L +G+ L + + GH D
Sbjct: 155 TPDGLQIQIVDDQNRPMFDSGSALVKPYMRDILREIGAALGSVENRISLAGHTDAAPYGN 214
Query: 96 ----NSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAI 150
S+ L RA A VA G+ +R+ +V + A NRR
Sbjct: 215 GDRGYSNWELSADRANASRRELVAAGMPDARLGRVVGLAASDLLEP-DNPRA-PVNRRIT 272
Query: 151 VFL 153
+ +
Sbjct: 273 ITV 275
>gi|28871298|ref|NP_793917.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213970867|ref|ZP_03398990.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv. tomato
T1]
gi|301384498|ref|ZP_07232916.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae
pv. tomato Max13]
gi|302059911|ref|ZP_07251452.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae
pv. tomato K40]
gi|302130510|ref|ZP_07256500.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae
pv. tomato NCPPB 1108]
gi|28854548|gb|AAO57612.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae
pv. tomato str. DC3000]
gi|213924390|gb|EEB57962.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv. tomato
T1]
gi|331015672|gb|EGH95728.1| sodium-type flagellar protein MotY, putative [Pseudomonas syringae
pv. lachrymans str. M302278PT]
Length = 301
Score = 37.9 bits (86), Expect = 0.52, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
++GH+D G+R ++ L RRA AV +YF A+GI ++ + +G+ P
Sbjct: 207 NRIELDGHSDNSGNRLTNRDLSRRRALAVMDYFKAQGIPEQQITLRFHGERYPLAPNT 264
>gi|170745045|ref|YP_001766503.1| hypothetical protein Mrad2831_6338 [Methylobacterium radiotolerans
JCM 2831]
gi|170659207|gb|ACB28260.1| VirBTraTrw family protein [Methylobacterium radiotolerans JCM 2831]
Length = 185
Score = 37.9 bits (86), Expect = 0.52, Method: Composition-based stats.
Identities = 18/138 (13%), Positives = 37/138 (26%), Gaps = 10/138 (7%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQ------VLSNLGSW 75
+ ++Q Q + + S Q +++L
Sbjct: 45 EAFPPAPVVVQRQGGPQAVQRQQAPRAAARPLYPVVSVQFPWNSAQFRPTPAQVAHLRGL 104
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK--VTSYGKEMP 133
+ + G D + + RA A ++ + G+ + + S G
Sbjct: 105 IAAGVAHVQVRGRTDNPNPSSGDERIARGRAEAAKDWLIGEGVPSGIIDLNFVSAGDYR- 163
Query: 134 SVYGHDEDAYAKNRRAIV 151
D A NRR +
Sbjct: 164 -SNNRLSDGRALNRRVDI 180
>gi|284050116|ref|ZP_06380326.1| hypothetical protein AplaP_01445 [Arthrospira platensis str.
Paraca]
Length = 179
Score = 37.9 bits (86), Expect = 0.54, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLR 104
+ + ++F++ S + P D+Q+++ + + I GH D G+ + L L
Sbjct: 61 VRIENRIYFNSGSAQLNPQDLQIITKIQEFLDRYPQLSLRIIGHTDLRGNAARNQQLALN 120
Query: 105 RAYAVFNYFVARGISASRMKVTS 127
RA AV + +GI R++V
Sbjct: 121 RAIAVRDALTKQGIDPKRLEVVG 143
>gi|120611464|ref|YP_971142.1| OmpA/MotB domain-containing protein [Acidovorax citrulli AAC00-1]
gi|120589928|gb|ABM33368.1| OmpA/MotB domain protein [Acidovorax citrulli AAC00-1]
Length = 177
Score = 37.9 bits (86), Expect = 0.54, Method: Composition-based stats.
Identities = 22/102 (21%), Positives = 40/102 (39%), Gaps = 8/102 (7%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
+F + + ++++ ++ + +I G D G ++ L +RA AV +
Sbjct: 80 YFASGRADLTADAAPAIADVVRAVKDGNRRVVISGFHDATGDAAANAGLAKQRAQAVRDA 139
Query: 113 FVARGISASRMKVTSYGKEMP-SVYGHDEDAYAKNRRAIVFL 153
VA G R+++ P G A A RR V L
Sbjct: 140 LVAAGAPEDRIELR-----KPELAQGDGNAAEA--RRVEVTL 174
>gi|255280230|ref|ZP_05344785.1| OmpA family protein [Bryantella formatexigens DSM 14469]
gi|255269321|gb|EET62526.1| OmpA family protein [Bryantella formatexigens DSM 14469]
Length = 319
Score = 37.9 bits (86), Expect = 0.54, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 41/122 (33%), Gaps = 19/122 (15%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLE---------KHDCDFLIEGHADELGSRNSSIALG 102
V FD + +VL N+ + + +I+G+ D G ++ L
Sbjct: 182 VLFDYDETELTEEGQEVLGNVLPIYCSVLMQEEYFPYLAEIIIDGYTDSSGGYEYNLELS 241
Query: 103 LRRAYAVFNYF----------VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
RR+ AV Y + ++ V + + + E+ +RR V
Sbjct: 242 QRRSLAVAEYLLGISQSFLDADDQDALKEKLTVNGHSSSNLVLNENGEEDADASRRVEVK 301
Query: 153 LK 154
+
Sbjct: 302 FR 303
>gi|330957747|gb|EGH58007.1| sodium-type flagellar protein MotY [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 301
Score = 37.5 bits (85), Expect = 0.55, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 31/58 (53%)
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
++GH+D G+R ++ L RRA AV +YF A+G+ ++ + +G+ P
Sbjct: 207 NRIELDGHSDNSGNRLTNRDLSRRRALAVMDYFKAQGVPEQQITLRFHGERYPLAPNT 264
>gi|289207762|ref|YP_003459828.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
gi|288943393|gb|ADC71092.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
Length = 325
Score = 37.5 bits (85), Expect = 0.56, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 46/126 (36%), Gaps = 9/126 (7%)
Query: 40 LQEQFSSSVGDS---VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG--- 93
E + D FDT+S + P +L L S + K I GH D
Sbjct: 157 TPEGLRIQIIDRENRPMFDTASSTPLPHADAILRELASLINKVPNRISITGHTDARPLLR 216
Query: 94 SRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
S+ L RA A +A G + ++ +V +P D +A A NRR +
Sbjct: 217 PDYSNWELSADRANAARRALIAGGAESGQVARVVGLADSVPF-TRDDPEA-AINRRISII 274
Query: 153 LKGCRA 158
+ A
Sbjct: 275 VLNQEA 280
>gi|39933290|ref|NP_945566.1| OmpA family protein [Rhodopseudomonas palustris CGA009]
gi|39652915|emb|CAE25657.1| possible OmpA family member [Rhodopseudomonas palustris CGA009]
Length = 689
Score = 37.5 bits (85), Expect = 0.56, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 51/128 (39%), Gaps = 8/128 (6%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGS-----WLEKHDCDFL 84
+ D + +++++ S +++ FD S+ I P L + FL
Sbjct: 539 TMDEIRYSPAVRQRMPSIDLNTINFDLGSWDIPPDQAAKLQAIADGLNRAIQRNPREVFL 598
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAY 143
IEGH D +G+ +++L RRA A + + YG++ + +
Sbjct: 599 IEGHTDAVGNDTDNLSLSDRRAEAAAALLTQQFGVPAENLTSQGYGEQYLKIQTQAPE-- 656
Query: 144 AKNRRAIV 151
+NRR +
Sbjct: 657 RQNRRVTI 664
>gi|327470903|gb|EGF16359.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus sanguinis SK330]
Length = 272
Score = 37.5 bits (85), Expect = 0.57, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 36/111 (32%), Gaps = 6/111 (5%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFD----- 55
M+YS + + +++ ++ DT S D S+ + + D +
Sbjct: 11 MKYSKLIFLAASVLVLGACS-SGKDTTGDSSDKQAASSTSTVKKQDAEKDKISRQDTTPS 69
Query: 56 TSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
+ S + L + + + ++G DE+ N L
Sbjct: 70 SDSTDTKKEQNHEAKTLDQNVSYNGSYYSVKGKYDEILVVNKHYPLSASYN 120
>gi|160896052|ref|YP_001561634.1| OmpA/MotB domain-containing protein [Delftia acidovorans SPH-1]
gi|160361636|gb|ABX33249.1| OmpA/MotB domain protein [Delftia acidovorans SPH-1]
Length = 345
Score = 37.5 bits (85), Expect = 0.57, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 45/123 (36%), Gaps = 8/123 (6%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR- 95
+ + FD+ S ++P +L +G+ L + + GH D
Sbjct: 156 TPDGLQIQIVDEQNRPMFDSGSAMVKPYMRDILREVGAALAGAENRISLSGHTDAAPYGN 215
Query: 96 ----NSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAI 150
S+ L RA A VA G+ +++ ++T + D A +NRR
Sbjct: 216 ADRGYSNWELSSDRANASRRELVAAGMPLNQLARITGLASSDLLLP-DDPRA-PQNRRIT 273
Query: 151 VFL 153
+ +
Sbjct: 274 ITV 276
>gi|319898651|ref|YP_004158744.1| flagellar motor protein MotB [Bartonella clarridgeiae 73]
gi|319402615|emb|CBI76160.1| putative flagellar motor protein MotB [Bartonella clarridgeiae 73]
Length = 384
Score = 37.5 bits (85), Expect = 0.57, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 44/110 (40%), Gaps = 6/110 (5%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR---NSSIALGLRRAYAV 109
F I ++S++ + KH D +I GH D R + L RA
Sbjct: 247 MFKVGLSIPTAQTIDLISSMAGIIAKHQGDVVISGHTDARPYRSNVYDNWQLSTARAQMA 306
Query: 110 FNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
+ V G+ R+ +V Y + D A A+NRR +F++ ++
Sbjct: 307 YYMLVRGGLDEKRILRVEGY-ADRDLKNKKDPYA-AENRRISIFIRDPKS 354
>gi|301018263|ref|ZP_07182776.1| chemotaxis protein MotB [Escherichia coli MS 69-1]
gi|306814281|ref|ZP_07448447.1| flagellar motor protein MotB [Escherichia coli NC101]
gi|300399773|gb|EFJ83311.1| chemotaxis protein MotB [Escherichia coli MS 69-1]
gi|305852440|gb|EFM52891.1| flagellar motor protein MotB [Escherichia coli NC101]
Length = 308
Score = 37.5 bits (85), Expect = 0.58, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 151 QIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSN 210
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A + G++ + ++V M +D A NRR + + +
Sbjct: 211 WELSADRANASRRELMVGGLNGGKVLRVVGMAATMRLSDRGPDD--AVNRRISLLVLNKQ 268
Query: 158 A 158
A
Sbjct: 269 A 269
>gi|295095518|emb|CBK84608.1| Flagellar motor protein [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 309
Score = 37.5 bits (85), Expect = 0.58, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 152 QIIDSQNRPMFKTGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYATGEKGYSN 211
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A VA G+ + ++V M +D A NRR + + +
Sbjct: 212 WELSADRANASRRELVAGGLDDGKVLRVVGMAATMRLTDRGPDD--AINRRISLLVLNQQ 269
Query: 158 A 158
A
Sbjct: 270 A 270
>gi|90412812|ref|ZP_01220812.1| hypothetical protein P3TCK_26075 [Photobacterium profundum 3TCK]
gi|90326171|gb|EAS42598.1| hypothetical protein P3TCK_26075 [Photobacterium profundum 3TCK]
Length = 319
Score = 37.5 bits (85), Expect = 0.58, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 40/103 (38%), Gaps = 5/103 (4%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
+ T + L+ + L+ + I G D G+ + + RA AV Y
Sbjct: 220 YQTGQVDVNDYGRYNLNEVAQTLQANPELTAEIIGRTDSTGTAAINAKVSEARANAVSQY 279
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAK-NRRAIVFLK 154
+ G+ ASR+ VTS + P D+ + R V +K
Sbjct: 280 LIDNGVDASRLTVTSVADQNPL---TDDSGKSLIERSVEVVIK 319
>gi|331683396|ref|ZP_08383997.1| chemotaxis protein MotB [Escherichia coli H299]
gi|284921808|emb|CBG34881.1| chemotaxis protein MotB (motility protein B) [Escherichia coli 042]
gi|331079611|gb|EGI50808.1| chemotaxis protein MotB [Escherichia coli H299]
Length = 308
Score = 37.5 bits (85), Expect = 0.58, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 151 QIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSN 210
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A + G++ + ++V M +D A NRR + + +
Sbjct: 211 WELSADRANASRRELMVGGLNGGKVLRVVGMAATMRLSDRGPDD--AVNRRISLLVLNKQ 268
Query: 158 A 158
A
Sbjct: 269 A 269
>gi|153808398|ref|ZP_01961066.1| hypothetical protein BACCAC_02692 [Bacteroides caccae ATCC 43185]
gi|149128720|gb|EDM19937.1| hypothetical protein BACCAC_02692 [Bacteroides caccae ATCC 43185]
Length = 274
Score = 37.5 bits (85), Expect = 0.59, Method: Composition-based stats.
Identities = 27/140 (19%), Positives = 54/140 (38%), Gaps = 10/140 (7%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
+S++ ++ I + + + + ++FF +S I+ Q +S+L +
Sbjct: 141 VSVTTVEQRPEPIPVVEQSKPKED--KIVVEPMKQNIFFALNSARIQDEQQQKISSLVEY 198
Query: 76 -LEKHDCDFLIEGHAD-ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP 133
+ I G+AD G+ + L RA V ++GI+A R+KV G
Sbjct: 199 LEKNPAAKICITGYADVNTGNATINFKLSEARAKNVAEALKSKGIAADRIKVDFKGDT-- 256
Query: 134 SVYGHDEDAYAKNRRAIVFL 153
+N R + +
Sbjct: 257 VQPYSTPK---EN-RVSICI 272
>gi|319403973|emb|CBI77561.1| putative flagellar motor protein MotB [Bartonella rochalimae ATCC
BAA-1498]
Length = 384
Score = 37.5 bits (85), Expect = 0.60, Method: Composition-based stats.
Identities = 25/109 (22%), Positives = 42/109 (38%), Gaps = 6/109 (5%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR---NSSIALGLRRAYAV 109
F I ++S++ + K+ D +I GH D R + L RA
Sbjct: 247 MFKVGLSVPTARTIDLISSMAGIIAKYQGDVVISGHTDARAYRSAVYDNWQLSTARAQMA 306
Query: 110 FNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
+ V G R+ +V Y + D A A+NRR +F++ +
Sbjct: 307 YYMLVRGGFDEKRILRVEGY-ADRDLKNKKDPYA-AENRRISIFIRDPK 353
>gi|116694193|ref|YP_728404.1| flagellar motor protein MotB [Ralstonia eutropha H16]
gi|113528692|emb|CAJ95039.1| Chemotaxis protein [Ralstonia eutropha H16]
Length = 321
Score = 37.5 bits (85), Expect = 0.60, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 39/121 (32%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD-----ELGSRNSS 98
+ F T S ++ +L +G L + + GH D S+
Sbjct: 157 QILDTQNRPMFRTGSATVETYMRTILREIGPVLNELPNKVSLSGHTDAANYSNGERTYSN 216
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A +A G+ + ++V MP NRR + + +
Sbjct: 217 WELSGDRANASRRELIAGGMQEGKVLRVLGLAATMPLDKEDLLA--PVNRRISIVVLNHK 274
Query: 158 A 158
A
Sbjct: 275 A 275
>gi|331647484|ref|ZP_08348576.1| chemotaxis protein MotB [Escherichia coli M605]
gi|330911699|gb|EGH40209.1| flagellar motor rotation protein MotB [Escherichia coli AA86]
gi|331043208|gb|EGI15346.1| chemotaxis protein MotB [Escherichia coli M605]
Length = 308
Score = 37.5 bits (85), Expect = 0.61, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 151 QIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSN 210
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A + G++ + ++V M +D A NRR + + +
Sbjct: 211 WELSADRANASRRELMVGGLNGGKVLRVVGMAATMRLSDRGPDD--AVNRRISLLVLNKQ 268
Query: 158 A 158
A
Sbjct: 269 A 269
>gi|281178957|dbj|BAI55287.1| chemotaxis protein MotB [Escherichia coli SE15]
Length = 308
Score = 37.5 bits (85), Expect = 0.61, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 151 QIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSN 210
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A + G++ + ++V M +D A NRR + + +
Sbjct: 211 WELSADRANASRRELMVGGLNGGKVLRVVGMAATMRLSDRGPDD--AVNRRISLLVLNKQ 268
Query: 158 A 158
A
Sbjct: 269 A 269
>gi|323977926|gb|EGB73012.1| OmpA family protein [Escherichia coli TW10509]
Length = 308
Score = 37.5 bits (85), Expect = 0.62, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 39/121 (32%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 151 QIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSN 210
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A + G+ + ++V M +D A NRR + + +
Sbjct: 211 WELSADRANASRRELMVGGLDGGKVLRVVGMAATMRLSDRGPDD--AVNRRISLLVLNKQ 268
Query: 158 A 158
A
Sbjct: 269 A 269
>gi|323968311|gb|EGB63718.1| OmpA family protein [Escherichia coli M863]
gi|327253019|gb|EGE64673.1| chemotaxis protein motB [Escherichia coli STEC_7v]
Length = 308
Score = 37.5 bits (85), Expect = 0.62, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 39/121 (32%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 151 QIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSN 210
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A + G+ + ++V M +D A NRR + + +
Sbjct: 211 WELSADRANASRRELMVGGLDGGKVLRVVGMAATMRLSDRGPDD--AVNRRISLLVLNKQ 268
Query: 158 A 158
A
Sbjct: 269 A 269
>gi|323344909|ref|ZP_08085133.1| hypothetical protein HMPREF0663_11669 [Prevotella oralis ATCC
33269]
gi|323094179|gb|EFZ36756.1| hypothetical protein HMPREF0663_11669 [Prevotella oralis ATCC
33269]
Length = 162
Score = 37.5 bits (85), Expect = 0.62, Method: Composition-based stats.
Identities = 15/117 (12%), Positives = 33/117 (28%), Gaps = 11/117 (9%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ +F++ + +++ + D + + D V T
Sbjct: 2 MKTIKLFLLAFVLCLLAACSSSSDDNGTKDKEKPVISD----------KDIVASPTDCQV 51
Query: 61 IRP-ADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
+ I V +E + I + D S+ L + N +V
Sbjct: 52 YKRGETIPVRYLFKDNMELGSFNIEIHNNFDHHTHSTSAADCPLDEKKSAVNPWVYN 108
>gi|312961582|ref|ZP_07776082.1| major outer membrane protein OmpAII [Pseudomonas fluorescens WH6]
gi|311284165|gb|EFQ62746.1| major outer membrane protein OmpAII [Pseudomonas fluorescens WH6]
Length = 309
Score = 37.5 bits (85), Expect = 0.62, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 42/129 (32%), Gaps = 12/129 (9%)
Query: 14 TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQ------ 67
+ S + ++ +P ++ V F + +
Sbjct: 159 ALSRASKVQQCNSLAMAPVEAAQFKD------YALSGDVLFAFGKSGYQDISSRGRIAIL 212
Query: 68 VLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
L + + GH D +GS ++ ALGL+RA V + G+ A+ + S
Sbjct: 213 ELITQLNREHAKLDRVEVVGHTDPIGSYAANQALGLKRAQTVRRLLIDGGLPANAVTARS 272
Query: 128 YGKEMPSVY 136
G P V
Sbjct: 273 AGSSEPIVD 281
>gi|209965626|ref|YP_002298541.1| OmpA family protein [Rhodospirillum centenum SW]
gi|209959092|gb|ACI99728.1| OmpA family protein [Rhodospirillum centenum SW]
Length = 314
Score = 37.5 bits (85), Expect = 0.62, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Query: 125 VTSYGKEMPS--VYGHDEDAYAKNRRAIV 151
V+ YG+ P G E+ Y +NRR +
Sbjct: 242 VSGYGERRPLPEAQGTTEEDYRRNRRIDL 270
>gi|188584558|ref|YP_001928003.1| OmpA/MotB domain protein [Methylobacterium populi BJ001]
gi|179348056|gb|ACB83468.1| OmpA/MotB domain protein [Methylobacterium populi BJ001]
Length = 277
Score = 37.5 bits (85), Expect = 0.64, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 38/136 (27%), Gaps = 10/136 (7%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD 82
+++ + + ++ S+ D F S ++L L L K
Sbjct: 130 PEVAELSKNVIIAPSRKGLDVSIVDQDGRSMFPEGSSRPNDRTRRLLERLAPTLMKLSNR 189
Query: 83 FLIEGHADE----LGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYG 137
+ G L RA +V + G+ R V P
Sbjct: 190 IAVTGFTATARPGTRDTAPPWELSANRALSVRDVLANAGLPDDRFASVAGKADTEPMFP- 248
Query: 138 HDEDAYAKNRRAIVFL 153
+ A NRR V L
Sbjct: 249 DNPY-LAANRRVTVTL 263
>gi|291570403|dbj|BAI92675.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 204
Score = 37.5 bits (85), Expect = 0.65, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSIALGLR 104
+ + ++F++ S + P D+Q+++ + + I GH D G+ + L L
Sbjct: 86 VRIENRIYFNSGSAQLNPQDLQIITKIQEFLDRYPQLSLRIIGHTDLRGNAARNQQLALN 145
Query: 105 RAYAVFNYFVARGISASRMKVTS 127
RA AV + +GI R++V
Sbjct: 146 RAIAVRDALTKQGIDPKRLEVVG 168
>gi|331085624|ref|ZP_08334708.1| hypothetical protein HMPREF0987_01011 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330407511|gb|EGG87013.1| hypothetical protein HMPREF0987_01011 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 371
Score = 37.5 bits (85), Expect = 0.66, Method: Composition-based stats.
Identities = 9/93 (9%), Positives = 27/93 (29%), Gaps = 1/93 (1%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ + +IL+ + +MS++ ++ + + ++ V
Sbjct: 1 MKKKILSLILAGVMVMSMAACAVKKPGAEDTAKDGDKKDSKGGYELALITDVGTIDDKS- 59
Query: 61 IRPADIQVLSNLGSWLEKHDCDFLIEGHADELG 93
+ L + + +DE
Sbjct: 60 FNQGSWEGLEKYAKEHDITYKYYKPAEKSDEAC 92
>gi|325660648|ref|ZP_08149279.1| hypothetical protein HMPREF0490_00010 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325473057|gb|EGC76264.1| hypothetical protein HMPREF0490_00010 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 371
Score = 37.5 bits (85), Expect = 0.66, Method: Composition-based stats.
Identities = 9/93 (9%), Positives = 27/93 (29%), Gaps = 1/93 (1%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ + +IL+ + +MS++ ++ + + ++ V
Sbjct: 1 MKKKILSLILAGVMVMSMAACAVKKPGAEDTAKDGDKKDSKGGYELALITDVGTIDDKS- 59
Query: 61 IRPADIQVLSNLGSWLEKHDCDFLIEGHADELG 93
+ L + + +DE
Sbjct: 60 FNQGSWEGLEKYAKEHDITYKYYKPAEKSDEAC 92
>gi|302037281|ref|YP_003797603.1| hypothetical protein NIDE1954 [Candidatus Nitrospira defluvii]
gi|300605345|emb|CBK41678.1| exported protein of unknown function, OmpA family [Candidatus
Nitrospira defluvii]
Length = 280
Score = 37.5 bits (85), Expect = 0.66, Method: Composition-based stats.
Identities = 14/70 (20%), Positives = 23/70 (32%)
Query: 77 EKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVY 136
+E + DE G+ S +G A V + R+ SYG + P+
Sbjct: 147 RNPMAHLTLEAYCDERGTEAYSFLIGREWALDVERRLQEMRVEEKRVTTVSYGLQQPACQ 206
Query: 137 GHDEDAYAKN 146
+ N
Sbjct: 207 EDSRTCWEDN 216
>gi|126661870|ref|ZP_01732869.1| peptidoglycan-associated lipoprotein [Flavobacteria bacterium
BAL38]
gi|126625249|gb|EAZ95938.1| peptidoglycan-associated lipoprotein [Flavobacteria bacterium
BAL38]
Length = 260
Score = 37.5 bits (85), Expect = 0.67, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 42/101 (41%), Gaps = 8/101 (7%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+V+FDT SY ++ +++ L + + + G+ D S + + L RA V
Sbjct: 22 TVYFDTDSYQLQLSELNRLDDFLKNKDIKFTKVI--GYCDYRASNSYNDTLAFNRANFV- 78
Query: 111 NYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
N + + + ++ + S G+ A NR+ +
Sbjct: 79 NGIIEKLTNQKQIAIESKGENFEQDSN-----LALNRKVEI 114
Score = 35.6 bits (80), Expect = 2.4, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 46/106 (43%), Gaps = 2/106 (1%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWL-EKHDCDFLIEGH 88
++++N+ S+ + + ++ F S + P VL L + + + I+GH
Sbjct: 132 GQNSLVNQVSIAKVGDKLILKNLHFYNRSGNFVPESRPVLEELLKIMLDNPNLKIEIQGH 191
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPS 134
+ RA AV+NY + +GI+ +R+ S+G P
Sbjct: 192 ICCQKGTDVE-DTAKVRALAVYNYLINKGINKNRLSYKSFGSSRPI 236
>gi|295699068|ref|YP_003606961.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
gi|295438281|gb|ADG17450.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
Length = 344
Score = 37.5 bits (85), Expect = 0.69, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 43/120 (35%), Gaps = 8/120 (6%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSSI 99
+ F + S ++P + +L+ +G+ L D I GH D + S+
Sbjct: 171 IVDSQNRPMFASGSSKLQPYAVTILTQIGAALNDVDNRISIAGHTDAVPYTAGPEGYSNW 230
Query: 100 ALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
L RA A VA G+ ++ ++ +P NRR + + A
Sbjct: 231 ELSSERANAARRALVAGGMHGDKLLQMRGLADVLPL--NSHVADEPTNRRISILVLNKAA 288
>gi|188592087|ref|YP_001796685.1| flagellar motor protein motb [Cupriavidus taiwanensis LMG 19424]
gi|170938461|emb|CAP63448.1| Chemotaxis protein MotB; Flagellar motor rotation, linking torque
machinery to cell wall [Cupriavidus taiwanensis LMG
19424]
Length = 321
Score = 37.5 bits (85), Expect = 0.69, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 39/121 (32%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD-----ELGSRNSS 98
+ F T S ++ +L +G L + + GH D S+
Sbjct: 157 QILDTQNRPMFRTGSATVESYMRTILREIGPVLNELPNKVSLSGHTDAANYSNGERTYSN 216
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A +A G+ + ++V MP NRR + + +
Sbjct: 217 WELSGDRANASRRELIAGGMQEGKVLRVLGLAATMPLDKQDLLA--PVNRRISIVVLNQK 274
Query: 158 A 158
A
Sbjct: 275 A 275
>gi|213861772|ref|ZP_03386242.1| outer membrane protein A [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
Length = 56
Score = 37.5 bits (85), Expect = 0.70, Method: Composition-based stats.
Identities = 8/48 (16%), Positives = 16/48 (33%), Gaps = 9/48 (18%)
Query: 119 SASRMKVTSYGKEMPS--VYGHDEDAYAK-------NRRAIVFLKGCR 157
A ++ G+ P + A +RR + +KG +
Sbjct: 1 PADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEVKGIK 48
>gi|163794140|ref|ZP_02188113.1| hypothetical protein BAL199_01964 [alpha proteobacterium BAL199]
gi|159180754|gb|EDP65273.1| hypothetical protein BAL199_01964 [alpha proteobacterium BAL199]
Length = 250
Score = 37.5 bits (85), Expect = 0.70, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 41/125 (32%), Gaps = 9/125 (7%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRN----- 96
++ ++ + F+ + ++ L + L + GHAD
Sbjct: 126 DRLIITLPSDLLFEAGQARLSTTARSAVAELATALVTLPNRIDVVGHADPRPIPPGAPFG 185
Query: 97 SSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP--SVYGHDEDAY-AKNRRAIVFL 153
++ AL L RA AV V G+S V G + A RR V L
Sbjct: 186 TNRALSLARADAVAVALVDAGLSRMP-TVEGMGDSRFYTIAPTAPMERRYALARRVDVVL 244
Query: 154 KGCRA 158
RA
Sbjct: 245 FPERA 249
>gi|237743864|ref|ZP_04574345.1| conserved hypothetical protein [Fusobacterium sp. 7_1]
gi|229432895|gb|EEO43107.1| conserved hypothetical protein [Fusobacterium sp. 7_1]
Length = 232
Score = 37.5 bits (85), Expect = 0.70, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 41/126 (32%), Gaps = 17/126 (13%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWL----------EKHDCDFLIEGHADELGSR 95
+ D + F+T Y ++P + L+ +K +IEGH D++GS
Sbjct: 89 IKIDDKILFNTGEYLLKPEGKKYLNEFVPIYINLLLNDEQVKKELSQIIIEGHTDDVGSY 148
Query: 96 NSSIALGLRRAYAVFNYFVARGIS-------ASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
++ L +RA+ V Y + + K+RR
Sbjct: 149 IYNMELSQKRAFEVIKYIYDEMPNFKGKEELKRYITANGRSNIKVLRDNSGNIDRDKSRR 208
Query: 149 AIVFLK 154
K
Sbjct: 209 VEFQFK 214
>gi|297538877|ref|YP_003674646.1| OmpA/MotB domain-containing protein [Methylotenera sp. 301]
gi|297258224|gb|ADI30069.1| OmpA/MotB domain protein [Methylotenera sp. 301]
Length = 311
Score = 37.5 bits (85), Expect = 0.71, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 46/134 (34%), Gaps = 20/134 (14%)
Query: 37 ESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR- 95
S + F++S ++P Q+L LG L + GH D
Sbjct: 157 TSDGLRVQIVDEQNRAMFNSSKAEMQPYAKQILQELGKTLNDVPNKISLSGHTDATPYPN 216
Query: 96 ----NSSIALGLRRAYAVFNYFVARGISASRM-KVTS------YGKEMPSVYGHDEDAYA 144
S+ L RA A VA G+ +++ +V + KE P A
Sbjct: 217 GEKSYSNWELSSDRANASRRELVAGGMDETKLLRVVGLSSASLFNKENPFD--------A 268
Query: 145 KNRRAIVFLKGCRA 158
NRR + + +A
Sbjct: 269 TNRRISIIIMNKQA 282
>gi|302383729|ref|YP_003819552.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
gi|302194357|gb|ADL01929.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
Length = 242
Score = 37.5 bits (85), Expect = 0.71, Method: Composition-based stats.
Identities = 18/95 (18%), Positives = 41/95 (43%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
+FF + + + + + + + ++G+AD GS +S+A+ RRA V +
Sbjct: 132 LFFPEGGTEVASDGARRMRFIVADYQPGQTVYRVQGYADTAGSAAASMAVSRRRADNVAS 191
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ +G+ + V ++G+ + D N
Sbjct: 192 ELIRQGVRWDDIVVEAFGETRLARPTPDGTGEPLN 226
>gi|300790394|ref|YP_003770685.1| OmpA family protein [Amycolatopsis mediterranei U32]
gi|299799908|gb|ADJ50283.1| OmpA family protein [Amycolatopsis mediterranei U32]
Length = 242
Score = 37.1 bits (84), Expect = 0.71, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 19/54 (35%), Gaps = 6/54 (11%)
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA AV G++ +R+ G P ++RR + +
Sbjct: 194 KLSRDRARAVARILTTNGLTVARVTYRGLGDTRP------ATGGEEDRRVEITV 241
>gi|261821136|ref|YP_003259242.1| OmpA/MotB domain protein [Pectobacterium wasabiae WPP163]
gi|261605149|gb|ACX87635.1| OmpA/MotB domain protein [Pectobacterium wasabiae WPP163]
Length = 350
Score = 37.1 bits (84), Expect = 0.73, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 38/121 (31%), Gaps = 7/121 (5%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + P +L + L I GH D++ S+
Sbjct: 149 QIIDSQNRPMFKTGSAQVEPYMRDILRAIAPILNDFPNKLSISGHTDDVQYTTGERGYSN 208
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A G+S + ++V M A NRR + + +
Sbjct: 209 WELSADRANASRRELTFGGLSDGKVLRVVGMAATMSLKQ-ATSGNDAINRRISLLVLSKQ 267
Query: 158 A 158
A
Sbjct: 268 A 268
>gi|88811687|ref|ZP_01126941.1| hypothetical protein NB231_04760 [Nitrococcus mobilis Nb-231]
gi|88791078|gb|EAR22191.1| hypothetical protein NB231_04760 [Nitrococcus mobilis Nb-231]
Length = 237
Score = 37.1 bits (84), Expect = 0.73, Method: Composition-based stats.
Identities = 18/125 (14%), Positives = 37/125 (29%), Gaps = 22/125 (17%)
Query: 51 SVFFDTSSYSIRPADIQVLSN-------LGSWLEKHDCDFLIEGHADEL--------GSR 95
V F+ S IRP +L + + + + IEGH +
Sbjct: 97 DVLFEVGSAEIRPRFKDILEDFFPRYLGILKGFKDSIDEVRIEGHTSSTWNQRVTDTKAY 156
Query: 96 NSSIALGLRRAYAVFNYFV-------ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
++ L R +V + + + + P + ++ A +RR
Sbjct: 157 FLNMELSQGRTRSVLQHVYRMPSIRGDQPWVQRQFAAVGFSSSRPILRPDGKEDRAHSRR 216
Query: 149 AIVFL 153
+
Sbjct: 217 VTFRV 221
>gi|189425754|ref|YP_001952931.1| hypothetical protein Glov_2698 [Geobacter lovleyi SZ]
gi|189422013|gb|ACD96411.1| hypothetical protein Glov_2698 [Geobacter lovleyi SZ]
Length = 370
Score = 37.1 bits (84), Expect = 0.73, Method: Composition-based stats.
Identities = 18/122 (14%), Positives = 34/122 (27%), Gaps = 11/122 (9%)
Query: 37 ESSLQEQFSSSVGD-SVFFDTSSYSIRPADIQV----LSNLGSWLEKHDCDFLIEGHADE 91
S S + + T + AD L+ L ++ + G
Sbjct: 250 VKSTSAGLSVTFPRSQLLKVTGKSTTLTADGDKQIVKLAELVRTYPEYRIKLRVHGFG-- 307
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISAS-RMKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
SR+ A A + + +G ++ G P + + NRR
Sbjct: 308 QPSRHEDAAATDHMARFIREGLLTKGKLEQATVEALGVGAAEPVYPKGNIEG---NRRVE 364
Query: 151 VF 152
+
Sbjct: 365 II 366
>gi|91784930|ref|YP_560136.1| OmpA/MotB family outer membrane protein [Burkholderia xenovorans
LB400]
gi|91688884|gb|ABE32084.1| outer membrane protein, OmpA/MotB family [Burkholderia xenovorans
LB400]
Length = 212
Score = 37.1 bits (84), Expect = 0.75, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
A R+ V YG+ P G D A +NRR V
Sbjct: 177 AKRIVVAGYGESRPL-PGVD-AADPRNRRVEV 206
>gi|325690634|gb|EGD32637.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus sanguinis SK115]
Length = 272
Score = 37.1 bits (84), Expect = 0.76, Method: Composition-based stats.
Identities = 14/110 (12%), Positives = 36/110 (32%), Gaps = 4/110 (3%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQF----SSSVGDSVFFDT 56
M+YS + + +++ ++ T SS + +S ++ + + +
Sbjct: 11 MKYSKLIFLAASVLVLGACSSGKDTTGDSSDKQAASSTSTVKKQDAEKDKNSSQDMTPSS 70
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
S + L + + + ++G DE+ N L
Sbjct: 71 DSTDTKKEQNHEAKTLDQNVSYNGSYYSVKGKYDEILVVNKHYPLSASYN 120
>gi|237739553|ref|ZP_04570034.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31]
gi|229423161|gb|EEO38208.1| conserved hypothetical protein [Fusobacterium sp. 2_1_31]
Length = 232
Score = 37.1 bits (84), Expect = 0.77, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 43/126 (34%), Gaps = 17/126 (13%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWL----------EKHDCDFLIEGHADELGSR 95
+ D + F+T Y ++P + L++ +K +IEGH D++GS
Sbjct: 89 IKIDDKILFNTGEYLLKPEGKKYLNDFVPIYINLLLNDEEVKKELSQIIIEGHTDDVGSY 148
Query: 96 NSSIALGLRRAYAVFNYFVARGIS-------ASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
++ L +RA+ V Y + S + K+RR
Sbjct: 149 IYNMELSQKRAFEVIKYIYDEMPNFKGKEELKSYITANGRSNIKVLRDNSGNIDRDKSRR 208
Query: 149 AIVFLK 154
K
Sbjct: 209 VEFQFK 214
>gi|213416605|ref|ZP_03349749.1| flagellar motor protein MotB [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 170
Score = 37.1 bits (84), Expect = 0.78, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 40/121 (33%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 13 QIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNGIPNRISLAGHTDDFPYANGEKGYSN 72
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A VA G+ + ++V M +D A NRR + + +
Sbjct: 73 WELSADRANASRRELVAGGLDNGKVLRVVGMAATMRLSDRGPDD--AINRRISLLVLNKQ 130
Query: 158 A 158
A
Sbjct: 131 A 131
>gi|307546933|ref|YP_003899412.1| flagellar motor protein MotB [Halomonas elongata DSM 2581]
gi|307218957|emb|CBV44227.1| flagellar motor protein MotB [Halomonas elongata DSM 2581]
Length = 317
Score = 37.1 bits (84), Expect = 0.78, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 47/139 (33%), Gaps = 11/139 (7%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
D + L E + D F+ S + P +L + L +
Sbjct: 129 ADPDLKQLRDQLRFDMTPEGLRIQLVDTEQRPMFELGSDRVAPYMRDLLRLMAPLLNELP 188
Query: 81 CDFLIEGHADELGS-----RNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPS 134
D I GH D L + L RA A VA G+ ++++ +V + +
Sbjct: 189 NDLSISGHTDSLAYLNGFQGYGNWELSSARANASRRELVAGGLDSAKLLRVAGFADQ--V 246
Query: 135 VYGHDEDAYAKNRRAIVFL 153
V E + NRR + +
Sbjct: 247 VMPDTEPSDPVNRRIELLV 265
>gi|212694226|ref|ZP_03302354.1| hypothetical protein BACDOR_03752 [Bacteroides dorei DSM 17855]
gi|224026264|ref|ZP_03644630.1| hypothetical protein BACCOPRO_03020 [Bacteroides coprophilus DSM
18228]
gi|253572701|ref|ZP_04850101.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|254882524|ref|ZP_05255234.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|317481440|ref|ZP_07940507.1| hypothetical protein HMPREF1007_03626 [Bacteroides sp. 4_1_36]
gi|329965200|ref|ZP_08302131.1| hypothetical protein HMPREF9446_03748 [Bacteroides fluxus YIT
12057]
gi|212663213|gb|EEB23787.1| hypothetical protein BACDOR_03752 [Bacteroides dorei DSM 17855]
gi|224019500|gb|EEF77498.1| hypothetical protein BACCOPRO_03020 [Bacteroides coprophilus DSM
18228]
gi|251837601|gb|EES65692.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|254835317|gb|EET15626.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|316902425|gb|EFV24312.1| hypothetical protein HMPREF1007_03626 [Bacteroides sp. 4_1_36]
gi|328523563|gb|EGF50660.1| hypothetical protein HMPREF9446_03748 [Bacteroides fluxus YIT
12057]
Length = 221
Score = 37.1 bits (84), Expect = 0.78, Method: Composition-based stats.
Identities = 14/133 (10%), Positives = 32/133 (24%), Gaps = 10/133 (7%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQ------EQFSSSVGDSVFF 54
M+ +F IL+ + ++ D + V + + E + S ++
Sbjct: 3 MRMKKLFSILAVAATVLLTACDEHQDFPDTAMKVTHILTTDGKVMPYETYEQSCKQAIAV 62
Query: 55 DTS----SYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+ L ++ + D + L V
Sbjct: 63 VFNVNQREEMEGNGYAVYLWDIAPEAFADSIGVEQDTSCDLTAYDGNKNTFALYGTTDVK 122
Query: 111 NYFVARGISASRM 123
+ R R
Sbjct: 123 SPLAERVFDMWRY 135
>gi|54309975|ref|YP_130995.1| hypothetical protein PBPRA2821 [Photobacterium profundum SS9]
gi|46914414|emb|CAG21193.1| hypothetical protein PBPRA2821 [Photobacterium profundum SS9]
Length = 319
Score = 37.1 bits (84), Expect = 0.78, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 41/103 (39%), Gaps = 5/103 (4%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
+ T + L+ + L+ + I G D G+ + + RA AV Y
Sbjct: 220 YQTGQVDVNDYGRYNLNEVAQTLQANPELTAEIIGRTDSTGTAAINAKVSEARANAVSQY 279
Query: 113 FVARGISASRMKVTSYGKEMPSVYGHDEDAYAK-NRRAIVFLK 154
+ G+ ASR+ VTS + P D++ + R V +K
Sbjct: 280 LIDNGVDASRLTVTSVADQNPL---TDDNGKSLIERSVEVVIK 319
>gi|329890064|ref|ZP_08268407.1| chemotaxis protein motB [Brevundimonas diminuta ATCC 11568]
gi|328845365|gb|EGF94929.1| chemotaxis protein motB [Brevundimonas diminuta ATCC 11568]
Length = 300
Score = 37.1 bits (84), Expect = 0.79, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 42/137 (30%), Gaps = 11/137 (8%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD 82
+++ L E + D F+ S P +L + + +
Sbjct: 153 PELAELSKQLIIDQTPEGLRIQLVDQEGRSMFENGSSRPNPRAQLLLRAVAKVINQLPNR 212
Query: 83 FLIEGHAD-----ELGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVY 136
I GH S L RA A + G+S+ R+ V P
Sbjct: 213 ITITGHTSAVAGSSRASSPGDWPLSSARADASRLTLQSAGVSSDRVYSVAGKAGSDPLYP 272
Query: 137 GHDEDAYAKNRRAIVFL 153
D+ + A NRR + L
Sbjct: 273 --DDPSLAGNRRIAIVL 287
>gi|257065338|ref|YP_003145010.1| hypothetical protein Shel_26620 [Slackia heliotrinireducens DSM
20476]
gi|256792991|gb|ACV23661.1| hypothetical protein Shel_26620 [Slackia heliotrinireducens DSM
20476]
Length = 384
Score = 37.1 bits (84), Expect = 0.80, Method: Composition-based stats.
Identities = 17/148 (11%), Positives = 38/148 (25%), Gaps = 7/148 (4%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKIS----SPDTVLNESSLQEQFSSSVGDSVFFDT 56
M+ + I +++ A + + G + P + + E + +
Sbjct: 1 MKKALILVMMMACLLGVVVGCGSQSNTEPKDYGPPMDISLSTEETEMYGVHLLLPDNSPL 60
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
P Q ++NL L + DE + + A+ +
Sbjct: 61 EQSESDPNYAQTVANLDDSLTIEIVVSMSYFPGDEQSYTTNPNSEETYTPAAILKDWADA 120
Query: 117 GISASRMKVTSY---GKEMPSVYGHDED 141
+ V G V +
Sbjct: 121 YSDPDSITVEGKTHIGGTAALVTTSSAE 148
>gi|163758026|ref|ZP_02165114.1| flagellar motor protein [Hoeflea phototrophica DFL-43]
gi|162284315|gb|EDQ34598.1| flagellar motor protein [Hoeflea phototrophica DFL-43]
Length = 411
Score = 37.1 bits (84), Expect = 0.80, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 40/108 (37%), Gaps = 4/108 (3%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG---SRNSSIALGLRRA 106
D F+ S + + +G L + D I GH D + + L L RA
Sbjct: 301 DFGMFNVGSAVPGRDLVIAMEKIGEVLAERDGAIAIRGHTDARPFASDTDDNWRLSLARA 360
Query: 107 YAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
++ + V G+S R+ S + + + NRR + ++
Sbjct: 361 HSAYYMLVRGGLSEERISQVSGFADRRLKDPDNPLSE-VNRRIEILVE 407
>gi|192288642|ref|YP_001989247.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1]
gi|192282391|gb|ACE98771.1| OmpA/MotB domain protein [Rhodopseudomonas palustris TIE-1]
Length = 306
Score = 37.1 bits (84), Expect = 0.81, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 53/128 (41%), Gaps = 8/128 (6%)
Query: 30 SPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-----FL 84
+ D + +++++ S +++ FD S+ I P L + L + FL
Sbjct: 156 TMDEIRYSPAVRQRMPSIDLNTINFDLGSWDIPPDQAAKLQAIADGLNRAIQRNPREVFL 215
Query: 85 IEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHDEDAY 143
IEGH D +G+ +++L RRA A + + YG++ + +
Sbjct: 216 IEGHTDAVGNDTDNLSLSDRRAEAAAALLTQQFGVPAENLTSQGYGEQYLKIQTQAPE-- 273
Query: 144 AKNRRAIV 151
+NRR +
Sbjct: 274 RQNRRVTI 281
>gi|170737030|ref|YP_001778290.1| OmpA/MotB domain-containing protein [Burkholderia cenocepacia
MC0-3]
gi|169819218|gb|ACA93800.1| OmpA/MotB domain protein [Burkholderia cenocepacia MC0-3]
Length = 340
Score = 37.1 bits (84), Expect = 0.84, Method: Composition-based stats.
Identities = 22/107 (20%), Positives = 35/107 (32%), Gaps = 10/107 (9%)
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNS------SIALGLRRAY 107
F + +L LG+ + + GH D + RNS + L + RA
Sbjct: 185 FVSGGAVPSEPFRPMLIKLGALMGSIGNPLFVMGHTDSVPYRNSDSGSRSNWDLSVDRAM 244
Query: 108 AVFNY-FVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ ++ S M+V P V A NRR +
Sbjct: 245 SARSWVLQGGVNSEQVMQVIGMADRAPLVNNPRA---AINRRIEFLV 288
>gi|187926231|ref|YP_001892576.1| OmpA/MotB domain protein [Ralstonia pickettii 12J]
gi|241665719|ref|YP_002984078.1| flagellar motor protein MotB [Ralstonia pickettii 12D]
gi|187727985|gb|ACD29149.1| OmpA/MotB domain protein [Ralstonia pickettii 12J]
gi|240867746|gb|ACS65406.1| OmpA/MotB domain protein [Ralstonia pickettii 12D]
Length = 315
Score = 37.1 bits (84), Expect = 0.84, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 39/120 (32%), Gaps = 7/120 (5%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG----SRNSSI 99
+ F +S ++P +L LG+ L + GH D S+
Sbjct: 156 QIVDQQNRPMFANASAEVQPYMRTILRELGTALNDVPNPISLSGHTDATQYATQHGYSNW 215
Query: 100 ALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
L RA A VA G+ ++ V +P NRR + + RA
Sbjct: 216 ELSADRANASRRELVAGGMKPEKVSRVVGLEASVPLD--KTNIYNPINRRISIVVLNARA 273
>gi|323948225|gb|EGB44213.1| OmpA family protein [Escherichia coli H120]
Length = 308
Score = 37.1 bits (84), Expect = 0.85, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 39/121 (32%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 151 QIIDSQNRPMFKTGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSN 210
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A + G+ + + ++V M +D A NRR + +
Sbjct: 211 WELSADRANASRRELMVGGLDSGKVLRVVGMAATMRLSDRGPDD--AVNRRISLLVLNKE 268
Query: 158 A 158
A
Sbjct: 269 A 269
>gi|196043445|ref|ZP_03110683.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus 03BB108]
gi|225864299|ref|YP_002749677.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus 03BB102]
gi|196025754|gb|EDX64423.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus 03BB108]
gi|225788486|gb|ACO28703.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus 03BB102]
Length = 283
Score = 37.1 bits (84), Expect = 0.85, Method: Composition-based stats.
Identities = 9/56 (16%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 1 MQYSTIFI-ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFD 55
M+ +F+ + + ++++S + D ++S + E L ++ G+S +
Sbjct: 1 MKKKKLFLGTIISCVVLALSACGSSDNVVTSKVGNITEKELSKELKQKYGESTLYQ 56
>gi|160894083|ref|ZP_02074861.1| hypothetical protein CLOL250_01637 [Clostridium sp. L2-50]
gi|156864116|gb|EDO57547.1| hypothetical protein CLOL250_01637 [Clostridium sp. L2-50]
Length = 251
Score = 37.1 bits (84), Expect = 0.85, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 45/143 (31%), Gaps = 19/143 (13%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN---------LGSWLEKHDC 81
D+ LN ++ + + SV FD + ++ L L +
Sbjct: 92 ADSSLNVKVDEKTGAITFDASVLFDVADSDLKEEGKTFLKEFLPKYCKVLLDEKYRDYVS 151
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS----------ASRMKVTSYGKE 131
+ +IEGH D GS ++ L RA++V Y + S +
Sbjct: 152 EIIIEGHTDTNGSYIYNLELSQHRAFSVAKYCLTESNGIISSTDVELLRSVLTANGKSYS 211
Query: 132 MPSVYGHDEDAYAKNRRAIVFLK 154
P +RR + +
Sbjct: 212 NPIYKEDGAVDLEASRRVEILFR 234
>gi|54298209|ref|YP_124578.1| flagellar motor protein MotB [Legionella pneumophila str. Paris]
gi|53751994|emb|CAH13420.1| hypothetical protein lpp2267 [Legionella pneumophila str. Paris]
Length = 312
Score = 37.1 bits (84), Expect = 0.88, Method: Composition-based stats.
Identities = 28/145 (19%), Positives = 50/145 (34%), Gaps = 12/145 (8%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDS---VFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
D ++ L + + + D+ FD S I P +L+N+ L
Sbjct: 162 KDPSLAGLKKQLLMDVVSDGLRIQLIDNQKKPMFDVGSDKINPEIEPILANIAKLLNSVP 221
Query: 81 CDFLIEGHADELGSR------NSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMP 133
I+GH D ++ L +RA A + G+ ++ M VT Y +
Sbjct: 222 NKITIQGHTDANPYHNPEELEYTNWELSAQRANAARRALIKAGMDENKVMTVTGYSSTVL 281
Query: 134 SVYGHDEDAYAKNRRAIVFLKGCRA 158
+ +NRR + + A
Sbjct: 282 LDK-KNPYN-PENRRISIIVMKKGA 304
>gi|307611161|emb|CBX00805.1| hypothetical protein LPW_25091 [Legionella pneumophila 130b]
Length = 253
Score = 37.1 bits (84), Expect = 0.89, Method: Composition-based stats.
Identities = 28/145 (19%), Positives = 50/145 (34%), Gaps = 12/145 (8%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDS---VFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
D ++ L + + + D+ FD S I P +L+N+ L
Sbjct: 103 KDPSLAGLKKQLLMDVVSDGLRIQLIDNQKKPMFDVGSDKINPEIEPILANIAKLLNSVP 162
Query: 81 CDFLIEGHADELGSR------NSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMP 133
I+GH D ++ L +RA A + G+ ++ M VT Y +
Sbjct: 163 NKITIQGHTDANPYHNPEELEYTNWELSAQRANAARRALIKAGMDENKVMTVTGYSSTVL 222
Query: 134 SVYGHDEDAYAKNRRAIVFLKGCRA 158
+ +NRR + + A
Sbjct: 223 LDK-KNPYN-PENRRISIIVMKKGA 245
>gi|148359858|ref|YP_001251065.1| hypothetical protein LPC_1786 [Legionella pneumophila str. Corby]
gi|296107908|ref|YP_003619609.1| chemotaxis protein MotB [Legionella pneumophila 2300/99 Alcoy]
gi|148281631|gb|ABQ55719.1| hypothetical protein LPC_1786 [Legionella pneumophila str. Corby]
gi|295649810|gb|ADG25657.1| chemotaxis protein MotB [Legionella pneumophila 2300/99 Alcoy]
Length = 312
Score = 37.1 bits (84), Expect = 0.90, Method: Composition-based stats.
Identities = 28/145 (19%), Positives = 50/145 (34%), Gaps = 12/145 (8%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDS---VFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
D ++ L + + + D+ FD S I P +L+N+ L
Sbjct: 162 KDPSLAGLKKQLLMDVVSDGLRIQLIDNQKKPMFDVGSDKINPEIEPILANIAKLLNSVP 221
Query: 81 CDFLIEGHADELGSR------NSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMP 133
I+GH D ++ L +RA A + G+ ++ M VT Y +
Sbjct: 222 NKITIQGHTDANPYHNPEELEYTNWELSAQRANAARRALIKAGMDENKVMTVTGYSSTVL 281
Query: 134 SVYGHDEDAYAKNRRAIVFLKGCRA 158
+ +NRR + + A
Sbjct: 282 LDK-KNPYN-PENRRISIIVMKKGA 304
>gi|295690006|ref|YP_003593699.1| OmpA/MotB domain-containing protein [Caulobacter segnis ATCC 21756]
gi|295431909|gb|ADG11081.1| OmpA/MotB domain protein [Caulobacter segnis ATCC 21756]
Length = 299
Score = 37.1 bits (84), Expect = 0.91, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 35/123 (28%), Gaps = 11/123 (8%)
Query: 39 SLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS- 94
E + D F +S +L + + + I GH
Sbjct: 169 QTPEGLRIQLVDQEGRSMFQENSKVPNDRARILLRAVAKVITQLPNRVTISGHTSASAYG 228
Query: 95 --RNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPS-VYGHDEDAYAKNRRAI 150
++ +L RA A A G+ R+ +V+ P NRR
Sbjct: 229 KKQDGDWSLSASRADASRQILRAAGVDDDRIYQVSGKANSEPLYADDPTLAG---NRRIS 285
Query: 151 VFL 153
+ L
Sbjct: 286 IVL 288
>gi|256026961|ref|ZP_05440795.1| lipoprotein [Fusobacterium sp. D11]
gi|260494993|ref|ZP_05815122.1| lipoprotein [Fusobacterium sp. 3_1_33]
gi|289764945|ref|ZP_06524323.1| lipoprotein [Fusobacterium sp. D11]
gi|260197436|gb|EEW94954.1| lipoprotein [Fusobacterium sp. 3_1_33]
gi|289716500|gb|EFD80512.1| lipoprotein [Fusobacterium sp. D11]
Length = 419
Score = 37.1 bits (84), Expect = 0.92, Method: Composition-based stats.
Identities = 10/94 (10%), Positives = 21/94 (22%), Gaps = 2/94 (2%)
Query: 1 MQYSTIFIILSAITMMSIS-GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSY 59
M I + A+ M+ I+ + + +S +G V S
Sbjct: 1 MNLKKILFSILAVFMLVIAVACGKKEAPTEDANAQQEAASEVATQDYHIG-IVTTSVSQS 59
Query: 60 SIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG 93
+ + + D
Sbjct: 60 EDNFRGAEAVLKQYGSSNDEGGKITVVTVPDNFM 93
>gi|54295159|ref|YP_127574.1| flagellar motor protein MotB [Legionella pneumophila str. Lens]
gi|53754991|emb|CAH16479.1| hypothetical protein lpl2239 [Legionella pneumophila str. Lens]
Length = 312
Score = 37.1 bits (84), Expect = 0.92, Method: Composition-based stats.
Identities = 28/145 (19%), Positives = 50/145 (34%), Gaps = 12/145 (8%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDS---VFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
D ++ L + + + D+ FD S I P +L+N+ L
Sbjct: 162 KDPSLAGLKKQLLMDVVSDGLRIQLIDNQKKPMFDVGSDKINPEIEPILANIAKLLNSVP 221
Query: 81 CDFLIEGHADELGSR------NSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMP 133
I+GH D ++ L +RA A + G+ ++ M VT Y +
Sbjct: 222 NKITIQGHTDANPYHNPEELEYTNWELSAQRANAARRALIKAGMDENKVMTVTGYSSTVL 281
Query: 134 SVYGHDEDAYAKNRRAIVFLKGCRA 158
+ +NRR + + A
Sbjct: 282 LDK-KNPYN-PENRRISIIVMKKGA 304
>gi|328542461|ref|YP_004302570.1| OmpA family protein [polymorphum gilvum SL003B-26A1]
gi|326412208|gb|ADZ69271.1| OmpA family protein [Polymorphum gilvum SL003B-26A1]
Length = 283
Score = 36.7 bits (83), Expect = 0.95, Method: Composition-based stats.
Identities = 26/152 (17%), Positives = 44/152 (28%), Gaps = 10/152 (6%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
A S+ +I+ + + +E + + D F S +
Sbjct: 122 FATAAASLRQAFQEMPEITEISSNIIMEETEEGLNILIVDQDGRSMFREGSKYPYETTRR 181
Query: 68 VLSNLGSWLEKHDCDFLIEGHADELGSR----NSSIALGLRRAYAVFNYFVARGISASRM 123
+L+ + L + I GH G+ + L RA GI A ++
Sbjct: 182 LLAKMAPVLAEMPNRIQITGHTTTGGTTADPSYTGWELSSDRANIARMILTEYGIPADQI 241
Query: 124 -KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
V P A NRR + L
Sbjct: 242 HSVVGKADSEPLFPNDPFL--AANRRIGILLM 271
>gi|160899374|ref|YP_001564956.1| OmpA/MotB domain-containing protein [Delftia acidovorans SPH-1]
gi|160364958|gb|ABX36571.1| OmpA/MotB domain protein [Delftia acidovorans SPH-1]
Length = 174
Score = 36.7 bits (83), Expect = 0.96, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 53/135 (39%), Gaps = 7/135 (5%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+ T +++ V+ E + + +F ++ + + L+++ + ++
Sbjct: 45 AKTAGGATPVAAMVPVVLEEDVARVVVENGVVKFYFASAKAELAVGANEALADVVAGVKG 104
Query: 79 HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
I G+ D GS + L +RA AV A G++ ++++ E G
Sbjct: 105 GKRAV-ISGYHDATGSAELNAELAKKRALAVQAALSALGVAEEKVELKK--PEQLQADGS 161
Query: 139 DEDAYAKNRRAIVFL 153
+ +A RR V L
Sbjct: 162 NAEA----RRVEVIL 172
>gi|39997270|ref|NP_953221.1| OmpA domain-containing protein [Geobacter sulfurreducens PCA]
gi|39984160|gb|AAR35548.1| OmpA domain protein, putative [Geobacter sulfurreducens PCA]
Length = 199
Score = 36.7 bits (83), Expect = 0.96, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 45/147 (30%), Gaps = 8/147 (5%)
Query: 7 FIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADI 66
+L M+++ D + + S + S + +
Sbjct: 53 LSLLPVKPMLAMRLSDPVKPEPQLALETKPVQSSTHGAIETEIQLTSVQFDFDSEQLSRH 112
Query: 67 QVLSNLGS-WLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKV 125
+ L G F ++G+ +G+ + + L +RRA V + G + + V
Sbjct: 113 ERLRFDGLLAGLTKQGMFGLKGYTCTIGTDDYNERLSIRRANHVAGIMKSNGFNV--VTV 170
Query: 126 TSYGKEMPSVYGHDEDAYAKNRRAIVF 152
GK P NRR +
Sbjct: 171 EGKGKCCPVSTDK-----RLNRRVEIV 192
>gi|295692353|ref|YP_003600963.1| aggregation promoting factor [Lactobacillus crispatus ST1]
gi|295030459|emb|CBL49938.1| Aggregation promoting factor [Lactobacillus crispatus ST1]
Length = 223
Score = 36.7 bits (83), Expect = 0.98, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 41/104 (39%), Gaps = 7/104 (6%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ +I + A+T +S++G+ + ++ + E+ +V D+ +SY
Sbjct: 1 MKIKSILVKSIAVTALSVTGLVAANNNTNTAQAAIVENDTDVVTVKNVSDNAITVYNSYK 60
Query: 61 IRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLR 104
A Q L++ SW +I+ D G + +
Sbjct: 61 NPEATGQTLASNTSWK-------VIKTAYDAKGHKWYDLGKNQW 97
>gi|197105150|ref|YP_002130527.1| chemotaxis MotB protein [Phenylobacterium zucineum HLK1]
gi|196478570|gb|ACG78098.1| chemotaxis MotB protein [Phenylobacterium zucineum HLK1]
Length = 301
Score = 36.7 bits (83), Expect = 0.98, Method: Composition-based stats.
Identities = 24/152 (15%), Positives = 43/152 (28%), Gaps = 9/152 (5%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPAD 65
A S+ +++ + E + D F+ S
Sbjct: 139 AAFASAAQSLRQSLQDMPELAELSKNIIIDQTPEGLRIQLVDQEGRSMFNAGSSQPNDRA 198
Query: 66 IQVLSNLGSWLEKHDCDFLIEGHADELGSRNS---SIALGLRRAYAVFNYFVARGISASR 122
+L + + + I GH + + L RA A G+ R
Sbjct: 199 KLLLRAVSKVINQLPNRVSIYGHTSANANGSRAESDWPLSAARADASRRILQGSGVDPDR 258
Query: 123 M-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ +V+ P D+ A NRR + L
Sbjct: 259 VYQVSGKAASEPLYP--DDPTLAGNRRIAIVL 288
>gi|256846454|ref|ZP_05551911.1| lipoprotein [Fusobacterium sp. 3_1_36A2]
gi|256718223|gb|EEU31779.1| lipoprotein [Fusobacterium sp. 3_1_36A2]
Length = 419
Score = 36.7 bits (83), Expect = 0.99, Method: Composition-based stats.
Identities = 9/93 (9%), Positives = 21/93 (22%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ I L A+ M+ ++ + E++ + V S
Sbjct: 1 MKMKKILFSLLAVFMLIVAVACGKKEAPTEDANAQQEAASEVVTQDYHIGIVTTSVSQSE 60
Query: 61 IRPADIQVLSNLGSWLEKHDCDFLIEGHADELG 93
+ + + D
Sbjct: 61 DNFRGAEAVVKQYGSSNDEGGKITVVTVPDNFM 93
>gi|119897740|ref|YP_932953.1| flagellar motor protein MotB [Azoarcus sp. BH72]
gi|119670153|emb|CAL94066.1| flagellar motor protein MotB [Azoarcus sp. BH72]
Length = 357
Score = 36.7 bits (83), Expect = 1.0, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 43/119 (36%), Gaps = 8/119 (6%)
Query: 46 SSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSSIA 100
+ F+++S +RP +L +G L + GH D S+
Sbjct: 176 VDEQNRPMFNSASADLRPYTRDLLRAIGRALNDVGNSVSVSGHTDSAQYAGGERGFSNWE 235
Query: 101 LGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
L RA A V+ G+ A ++ +V +P A NRR + + +A
Sbjct: 236 LSSNRANASRRELVSGGLLAGKVVRVVGLADTIPL--NRANPMDAVNRRISIIVLNKQA 292
>gi|111038072|ref|YP_709159.1| putative outer membrane protein [IncP-1 plasmid pKJK5]
gi|110781077|emb|CAK02661.1| putative outer membrane protein [IncP-1 plasmid pKJK5]
Length = 143
Score = 36.7 bits (83), Expect = 1.0, Method: Composition-based stats.
Identities = 23/150 (15%), Positives = 40/150 (26%), Gaps = 15/150 (10%)
Query: 4 STIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRP 63
F+ +S +M+ G D + V + S D S
Sbjct: 3 KAFFLAISLASMIFAQGALAADYGTAHSTPVSS------MVMVSFPD---------SSTT 47
Query: 64 ADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
+ + G L L+RA + Y V RG+S ++
Sbjct: 48 FQPPADVAAVLADARAASMIYVNGRTSTNRPSARDEILALKRALSARKYLVDRGVSPLKI 107
Query: 124 KVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
V + +N+R + L
Sbjct: 108 MVNFASAADYVTENITPEGRYQNQRVEIEL 137
>gi|324326356|gb|ADY21616.1| peptidylprolyl isomerase [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 283
Score = 36.7 bits (83), Expect = 1.0, Method: Composition-based stats.
Identities = 9/56 (16%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 1 MQYSTIFI-ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFD 55
M+ +F+ + + ++++S + D ++S + E L ++ G+S +
Sbjct: 1 MKKKKLFLGTIISCVVLALSACGSSDNVVTSKVGNVTEKELSKELRQKYGESTLYQ 56
>gi|222095920|ref|YP_002529977.1| peptidylprolyl isomerase [Bacillus cereus Q1]
gi|221239978|gb|ACM12688.1| protein export protein prsa [Bacillus cereus Q1]
Length = 283
Score = 36.7 bits (83), Expect = 1.0, Method: Composition-based stats.
Identities = 9/56 (16%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 1 MQYSTIFI-ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFD 55
M+ +F+ + + ++++S + D ++S + E L ++ G+S +
Sbjct: 1 MKKKKLFLGTIISCVVLALSACGSSDNVVTSKVGNVTEKELSKELRQKYGESTLYQ 56
>gi|206973718|ref|ZP_03234636.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus H3081.97]
gi|217959835|ref|YP_002338389.1| peptidylprolyl isomerase [Bacillus cereus AH187]
gi|206747874|gb|EDZ59263.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus H3081.97]
gi|217064695|gb|ACJ78945.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus AH187]
Length = 283
Score = 36.7 bits (83), Expect = 1.0, Method: Composition-based stats.
Identities = 9/56 (16%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 1 MQYSTIFI-ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFD 55
M+ +F+ + + ++++S + D ++S + E L ++ G+S +
Sbjct: 1 MKKKKLFLGTIISCVVLALSACGSSDNVVTSKVGNVTEKELSKELRQKYGESTLYQ 56
>gi|47565690|ref|ZP_00236730.1| peptidyl-prolyl cis-trans isomerase [Bacillus cereus G9241]
gi|47557326|gb|EAL15654.1| peptidyl-prolyl cis-trans isomerase [Bacillus cereus G9241]
Length = 283
Score = 36.7 bits (83), Expect = 1.0, Method: Composition-based stats.
Identities = 9/56 (16%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 1 MQYSTIFI-ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFD 55
M+ +F+ + + ++++S + D ++S + E L ++ G+S +
Sbjct: 1 MKKKKLFLGTIISCVVLALSACGSSDNVVTSKVGNVTEKELSKELRQKYGESTLYQ 56
>gi|323945384|gb|EGB41438.1| OmpA family protein [Escherichia coli H120]
Length = 148
Score = 36.7 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 33/92 (35%), Gaps = 4/92 (4%)
Query: 65 DIQVLSNLGSWLEKHDCDFLIEGHADEL---GSRNSSIALGLRRAYAVFNYFVARGISAS 121
+L L + D +I GH D + + ++ L RA + G+
Sbjct: 19 FKTLLVELAPVFDSLDNKIIITGHTDAMAYKNNIYNNWNLSGDRALSARRVLEEAGMPED 78
Query: 122 RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
++ S + + + + A NRR + +
Sbjct: 79 KVMQVSAMADQMLLDAKNPQS-AGNRRIEIMV 109
>gi|256844708|ref|ZP_05550193.1| aggregation-promoting factor [Lactobacillus crispatus 125-2-CHN]
gi|256613249|gb|EEU18453.1| aggregation-promoting factor [Lactobacillus crispatus 125-2-CHN]
Length = 223
Score = 36.7 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 41/104 (39%), Gaps = 7/104 (6%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ +I + A+T +S++G+ + ++ + E+ +V D+ +SY
Sbjct: 1 MKIKSILVKSIAVTALSVTGLVAANNNTNTAQAAIVENDTDVVTVKNVSDNAITVYNSYK 60
Query: 61 IRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLR 104
A Q L++ SW +I+ D G + +
Sbjct: 61 NPEATGQTLASNTSWK-------VIKTAYDAKGHKWYDLGKNQW 97
>gi|163815615|ref|ZP_02206988.1| hypothetical protein COPEUT_01790 [Coprococcus eutactus ATCC 27759]
gi|158449252|gb|EDP26247.1| hypothetical protein COPEUT_01790 [Coprococcus eutactus ATCC 27759]
Length = 251
Score = 36.7 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 23/142 (16%), Positives = 46/142 (32%), Gaps = 19/142 (13%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSN---------LGSWLEKHDCD 82
+ LN ++ + + V FD S ++ + ++ L + +
Sbjct: 93 GSSLNVKIDEKTGAITFDAGVLFDVSDSELKEDGKKFINQFLPKYCSVLLSDDYRDYVSE 152
Query: 83 FLIEGHADELGSRNSSIALGLRRAYAVFNYF----------VARGISASRMKVTSYGKEM 132
+IEGH D GS ++ L +RA++V Y + +
Sbjct: 153 IIIEGHTDTNGSYIYNLELSQQRAFSVARYCLTESNGIISSGQEEQLRTVLTANGKSYSN 212
Query: 133 PSVYGHDEDAYAKNRRAIVFLK 154
P E +RR + +
Sbjct: 213 PIYGDDGEVDMDASRRVEIKFR 234
>gi|312196129|ref|YP_004016190.1| OmpA/MotB domain protein [Frankia sp. EuI1c]
gi|311227465|gb|ADP80320.1| OmpA/MotB domain protein [Frankia sp. EuI1c]
Length = 452
Score = 36.7 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 54/157 (34%), Gaps = 8/157 (5%)
Query: 5 TIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPA 64
++ ++A + D + P + F+ S+ D V F S + P
Sbjct: 289 SVLSNVTASETAIPAENGAADEPVDFPAQPRPRPAGTGVFTVSLPDQVLFARDSNDLSPD 348
Query: 65 DIQVLSNLGSWLEKHDCDFL-IEGHADELGSRNSSIALGLRRAYAVFN-------YFVAR 116
L+ + S + + + GH D G+ + L RA AV + +R
Sbjct: 349 ADLTLTAVVSEVRGLRGSVVNVIGHTDTTGTDAYNRLLSKSRADAVADALVARGLPVASR 408
Query: 117 GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+ S + G E DE A +RR + +
Sbjct: 409 TGAGSSIPGPGCGPEHRPDGTDDERAMRCDRRVELVI 445
>gi|315126001|ref|YP_004068004.1| chemotaxis LafU protein [Pseudoalteromonas sp. SM9913]
gi|315014515|gb|ADT67853.1| chemotaxis LafU protein [Pseudoalteromonas sp. SM9913]
Length = 331
Score = 36.7 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 39/100 (39%), Gaps = 6/100 (6%)
Query: 58 SYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRN---SSIALGLRRAYAVFNYFV 114
+ P + LG ++ + +I GH+D + + + RA
Sbjct: 191 KSQMTPFFEDLFLYLGGLVKDINNKIIISGHSDASLFIDGSSRNWDISGDRAQQARKVMT 250
Query: 115 ARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G+ +S+ ++V ++ P + + ++NRR + +
Sbjct: 251 MGGMPSSQVLQVNAFSSNRPLNKENQKA--SENRRVELLI 288
>gi|183221257|ref|YP_001839253.1| OmpA domain-containing protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189911348|ref|YP_001962903.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167776024|gb|ABZ94325.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
gi|167779679|gb|ABZ97977.1| Putative outer membrane protein, OmpA domain; putative membrane
protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Paris)']
Length = 271
Score = 36.7 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 21/112 (18%), Positives = 43/112 (38%), Gaps = 4/112 (3%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALG 102
++++ + F+ ++ + + L L + I GHA+ G+ + ++ L
Sbjct: 158 LTATMDGGIAFEDGKADLKGKGKENVDKLAEALAAYPETKINITGHANRTGAEDLNLRLS 217
Query: 103 LRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA + + G+ R+ V G P +D NRR V +
Sbjct: 218 QDRAVTAKDAIIENGVEGKRIGTVQGLGSSTPMKNVDPKDG--SNRRVEVEI 267
>gi|319944147|ref|ZP_08018425.1| chemotaxis MotB protein [Lautropia mirabilis ATCC 51599]
gi|319742641|gb|EFV95050.1| chemotaxis MotB protein [Lautropia mirabilis ATCC 51599]
Length = 309
Score = 36.7 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 45/130 (34%), Gaps = 13/130 (10%)
Query: 40 LQEQFSSSVGDS----VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS- 94
+ S + D+ +F S + P +++ +G L + + + GH D
Sbjct: 145 TVDGLSIQIVDASKKPLFASGKSTVLSPNMRELMRTIGKLLNEVENPVSLSGHTDATPYA 204
Query: 95 -----RNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRR 148
S+ L RA + V G+ +++ +V G +P NRR
Sbjct: 205 GGSTGGYSNWELSTERANSSRRELVQGGMDPNKILRVQGLGAVVPLD--KTNPNDPMNRR 262
Query: 149 AIVFLKGCRA 158
+ + A
Sbjct: 263 IAIVVLNEAA 272
>gi|296103598|ref|YP_003613744.1| chemotaxis protein MotB [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295058057|gb|ADF62795.1| chemotaxis protein MotB [Enterobacter cloacae subsp. cloacae ATCC
13047]
Length = 301
Score = 36.7 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 40/123 (32%), Gaps = 11/123 (8%)
Query: 40 LQEQFSSSV---GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR- 95
+ + D F S +L L L++ + GH D L
Sbjct: 142 TNDGLLIQITDSQDRPMFRVGSELPESYMNGILQALVPLLQELPNALSLTGHTDSLPYAG 201
Query: 96 ----NSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
S+ L RA A V G++ R ++V MP D+ A NRR
Sbjct: 202 GDGGYSNWELSAGRANAARRVLVRGGLNDERFLRVIGTASRMPL-ENTSPDS-AVNRRIS 259
Query: 151 VFL 153
+ +
Sbjct: 260 ILV 262
>gi|268590004|ref|ZP_06124225.1| chemotaxis MotB protein [Providencia rettgeri DSM 1131]
gi|291314723|gb|EFE55176.1| chemotaxis MotB protein [Providencia rettgeri DSM 1131]
Length = 305
Score = 36.7 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 40/110 (36%), Gaps = 9/110 (8%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSIALGLRR 105
+ F S ++ P +L + L I GH D+L S+ L R
Sbjct: 155 NRPMFKVGSATVEPYMRDILRAIAPLLNDVPNRISISGHTDDLAYANGANYSNWELSSDR 214
Query: 106 AYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYA-KNRRAIVFL 153
A A + G+ ++ ++V + ED +A NRR + +
Sbjct: 215 ANASRRELIRGGMDENKVLRVVGMASAIHLDK---EDGFAPINRRISIIV 261
>gi|89068739|ref|ZP_01156125.1| MotB [Oceanicola granulosus HTCC2516]
gi|89045702|gb|EAR51764.1| MotB [Oceanicola granulosus HTCC2516]
Length = 345
Score = 36.7 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 42/108 (38%), Gaps = 8/108 (7%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSSIALGLRRAY 107
F + S I + +++ +G + I GH D + S+ L RA
Sbjct: 232 MFRSGSAEIEESTRELIGVVGETIRGLPYPVAITGHTDSVPFSGARDGYSNWELSADRAN 291
Query: 108 AVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
A +A G+ A+R+ +++ V + +NRR V ++
Sbjct: 292 AARRTLIAAGVDAARIVEISGLAATELRVPDIPDA--PENRRIEVLMQ 337
>gi|262372083|ref|ZP_06065362.1| small protein A (tmRNA-binding) [Acinetobacter junii SH205]
gi|262312108|gb|EEY93193.1| small protein A (tmRNA-binding) [Acinetobacter junii SH205]
Length = 181
Score = 36.7 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 11/131 (8%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIR--PADIQVLSNLGSWLEKHDCD--FLIEGH 88
N+ +++ SVFF + ++++ +++ + ++ G
Sbjct: 50 GANNQVPANTNLNNARSGSVFFTFDRSNANAIEHGSDSVTSIAQRIKQSNATGPVIVAGF 109
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMP-------SVYGHDED 141
AD LG + L +R V GI +R+++ + + +
Sbjct: 110 ADPLGKFAYNQQLSSQRVNTVAKLLFNEGIDVNRIQIQANSQTDLYQQCAGHKANNQLVN 169
Query: 142 AYAKNRRAIVF 152
A NRR +
Sbjct: 170 CLAPNRRVNII 180
>gi|323445947|gb|EGB02315.1| hypothetical protein AURANDRAFT_68995 [Aureococcus anophagefferens]
Length = 664
Score = 36.7 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 40/113 (35%), Gaps = 7/113 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW-LEKHDCDFLIEGHADELGSRNSSI--A 100
V D+V F S + VL + E+ +EGH S+
Sbjct: 66 QELRVSDTVQFAACSSDVTDGSAGVLDAVARVLAERPHLVVRVEGHCCTSPMWGSTTIEE 125
Query: 101 LGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
L RA AV ARG+ +++ +G ++P D NRR +
Sbjct: 126 LAADRAEAVVAALAARGVPRDQLRPRGFGADLPV----DVANKRLNRRTEFHV 174
>gi|315650943|ref|ZP_07903983.1| amino acid ABC superfamily ATP binding cassette transporter,
binding protein [Eubacterium saburreum DSM 3986]
gi|315486789|gb|EFU77131.1| amino acid ABC superfamily ATP binding cassette transporter,
binding protein [Eubacterium saburreum DSM 3986]
Length = 279
Score = 36.7 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 8/65 (12%), Positives = 22/65 (33%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ +F +L+A+ + S ++ +S +T S + + ++
Sbjct: 1 MKKIYLFGVLAALMLAGCSTAKTTESTSASQETSKTASESGKAADADNKNTFTVGFDQDF 60
Query: 61 IRPAD 65
Sbjct: 61 PPMGF 65
>gi|227112504|ref|ZP_03826160.1| flagellar motor protein [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
gi|227326903|ref|ZP_03830927.1| flagellar motor protein [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 351
Score = 36.7 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 39/121 (32%), Gaps = 7/121 (5%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + P +L + L I GH D++ S+
Sbjct: 149 QIIDSQNRPMFKTGSAQVEPYMRDILRAIAPILNDFPNKLSISGHTDDVQYTTGERGYSN 208
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A + G+S + ++V M A NRR + + +
Sbjct: 209 WELSADRANASRRELIFGGLSDGKVLRVVGMAATMSLKQ-ATGGNDAINRRISLLVLSRQ 267
Query: 158 A 158
A
Sbjct: 268 A 268
>gi|196232100|ref|ZP_03130955.1| hypothetical protein CfE428DRAFT_4121 [Chthoniobacter flavus
Ellin428]
gi|196223822|gb|EDY18337.1| hypothetical protein CfE428DRAFT_4121 [Chthoniobacter flavus
Ellin428]
Length = 304
Score = 36.7 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 22/108 (20%), Positives = 36/108 (33%), Gaps = 10/108 (9%)
Query: 51 SVFFDTSSYSIRPADIQVL------SNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLR 104
++ F + + DIQ L + S F+I G+AD G +I +
Sbjct: 197 TIPFGSGKTELTATDIQQLKAELEKPEIVSLRGDPTAVFVILGYADPKGDAKKNITISES 256
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
RA +V + + M G D KNR ++
Sbjct: 257 RADSVRKIMKDKCDVINVMHTVGMGGSKLL----DAHNLEKNRIVEIW 300
>gi|24213001|ref|NP_710482.1| OmpA family protein [Leptospira interrogans serovar Lai str. 56601]
gi|24193684|gb|AAN47500.1| OmpA family protein [Leptospira interrogans serovar Lai str. 56601]
Length = 589
Score = 36.7 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 31/79 (39%)
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
E ++ H+ G + RA YF ++ + R++ YG+ +P +
Sbjct: 510 NEFPGYKIELQSHSSHQGDEEVNQVGTEERAREALEYFFSKTVPFGRIRFRGYGETLPLI 569
Query: 136 YGHDEDAYAKNRRAIVFLK 154
G + KN+R +L
Sbjct: 570 PGSGKYEADKNQRIDFYLS 588
>gi|196033913|ref|ZP_03101324.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus W]
gi|195993593|gb|EDX57550.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus W]
Length = 283
Score = 36.7 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 9/56 (16%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 1 MQYSTIFI-ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFD 55
M+ +F+ + + ++++S + D ++S + E L ++ G+S +
Sbjct: 1 MKKKKLFLGTIISCVVLALSACGSSDNVVTSKVGNITEKELSKELRQKYGESTLYQ 56
>gi|52143135|ref|YP_083692.1| peptidylprolyl isomerase [Bacillus cereus E33L]
gi|51976604|gb|AAU18154.1| protein export protein [Bacillus cereus E33L]
Length = 283
Score = 36.7 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 9/56 (16%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 1 MQYSTIFI-ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFD 55
M+ +F+ + + ++++S + D ++S + E L ++ G+S +
Sbjct: 1 MKKKKLFLGTIISCVVLALSACGSSDNVVTSKVGNITEKELSKELRQKYGESTLYQ 56
>gi|49185187|ref|YP_028439.1| peptidylprolyl isomerase [Bacillus anthracis str. Sterne]
gi|49479990|ref|YP_036442.1| peptidylprolyl isomerase [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|165870489|ref|ZP_02215143.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. A0488]
gi|167633046|ref|ZP_02391372.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. A0442]
gi|167639670|ref|ZP_02397940.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. A0193]
gi|170687085|ref|ZP_02878304.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. A0465]
gi|170706725|ref|ZP_02897184.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. A0389]
gi|177649682|ref|ZP_02932684.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. A0174]
gi|190565511|ref|ZP_03018431.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis
Tsiankovskii-I]
gi|196040038|ref|ZP_03107341.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus NVH0597-99]
gi|218903473|ref|YP_002451307.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus AH820]
gi|227814851|ref|YP_002814860.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. CDC 684]
gi|229604551|ref|YP_002866676.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. A0248]
gi|254684916|ref|ZP_05148776.1| peptidylprolyl isomerase [Bacillus anthracis str. CNEVA-9066]
gi|254722324|ref|ZP_05184112.1| peptidylprolyl isomerase [Bacillus anthracis str. A1055]
gi|254737363|ref|ZP_05195067.1| peptidylprolyl isomerase [Bacillus anthracis str. Western North
America USA6153]
gi|254743452|ref|ZP_05201137.1| peptidylprolyl isomerase [Bacillus anthracis str. Kruger B]
gi|254751679|ref|ZP_05203716.1| peptidylprolyl isomerase [Bacillus anthracis str. Vollum]
gi|254760198|ref|ZP_05212222.1| peptidylprolyl isomerase [Bacillus anthracis str. Australia 94]
gi|301053856|ref|YP_003792067.1| peptidylprolyl isomerase [Bacillus anthracis CI]
gi|46396831|sp|Q81QT1|PRSA3_BACAN RecName: Full=Foldase protein prsA 3; Flags: Precursor
gi|49179114|gb|AAT54490.1| protein export protein prsA [Bacillus anthracis str. Sterne]
gi|49331546|gb|AAT62192.1| protein export protein prsA [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|164713644|gb|EDR19167.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. A0488]
gi|167512379|gb|EDR87755.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. A0193]
gi|167531858|gb|EDR94523.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. A0442]
gi|170128456|gb|EDS97324.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. A0389]
gi|170669136|gb|EDT19880.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. A0465]
gi|172084756|gb|EDT69814.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. A0174]
gi|190563538|gb|EDV17503.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis
Tsiankovskii-I]
gi|196029297|gb|EDX67901.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus NVH0597-99]
gi|218538215|gb|ACK90613.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus AH820]
gi|227007172|gb|ACP16915.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. CDC 684]
gi|229268959|gb|ACQ50596.1| peptidylprolyl isomerase PrsA3 [Bacillus anthracis str. A0248]
gi|300376025|gb|ADK04929.1| peptidylprolyl isomerase [Bacillus cereus biovar anthracis str.
CI]
Length = 283
Score = 36.7 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 9/56 (16%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 1 MQYSTIFI-ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFD 55
M+ +F+ + + ++++S + D ++S + E L ++ G+S +
Sbjct: 1 MKKKKLFLGTIISCVVLALSACGSSDNVVTSKVGNITEKELSKELRQKYGESTLYQ 56
>gi|325298054|ref|YP_004257971.1| aminodeoxychorismate lyase [Bacteroides salanitronis DSM 18170]
gi|324317607|gb|ADY35498.1| aminodeoxychorismate lyase [Bacteroides salanitronis DSM 18170]
Length = 341
Score = 36.7 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 38/125 (30%), Gaps = 12/125 (9%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ T+FI + + +++ GI T I L ++ DT +
Sbjct: 1 MKKKTLFIAIGIVLLVAACGIVTAYTCI-----------LNRPLKIEKPTFIYIDTD-DN 48
Query: 61 IRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA 120
I ++ L + H E + R + +F A +
Sbjct: 49 IDSVCYKLEHQLLASRITGFRMLASYTHYAENIHTGAYRFAPEERTWHIFRRLQAGNQTP 108
Query: 121 SRMKV 125
R+ V
Sbjct: 109 VRLTV 113
>gi|251789151|ref|YP_003003872.1| flagellar motor protein MotB [Dickeya zeae Ech1591]
gi|247537772|gb|ACT06393.1| OmpA/MotB domain protein [Dickeya zeae Ech1591]
Length = 376
Score = 36.7 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 11/123 (8%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRN-----SS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 147 QIIDSNNRPMFKTGSAQVEPYMSDILRAIAPILNDIPNKISLSGHTDDAQYAMGERGYSN 206
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPS--VYGHDEDAYAKNRRAIVFLKG 155
L RA A +A G++ + ++V M G + A NRR + +
Sbjct: 207 WELSADRANASRRELIAGGLADGKVLRVVGMADTMNLKQAKGGSD---AINRRISLVVLN 263
Query: 156 CRA 158
+A
Sbjct: 264 KQA 266
>gi|30248076|ref|NP_840146.1| flagellar motor protein MotB [Nitrosomonas europaea ATCC 19718]
gi|30179961|emb|CAD83956.1| Bacterial outer membrane protein [Nitrosomonas europaea ATCC 19718]
Length = 307
Score = 36.7 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 37/127 (29%), Gaps = 20/127 (15%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F ++ +L +G L + GH D S+
Sbjct: 163 QIVDEKNRPMFSMGRAELQSYTKMILHEIGKMLNDVGNKISLSGHTDATPYPTGEKSYSN 222
Query: 99 IALGLRRAYAVFNYFVARGISA-SRMKVTS------YGKEMPSVYGHDEDAYAKNRRAIV 151
L RA A +A G+S ++V + K P NRR +
Sbjct: 223 WELSADRANASRRELIAGGMSPEKMLRVVGLSSAVMFDKADPFSP--------FNRRISI 274
Query: 152 FLKGCRA 158
+ +A
Sbjct: 275 IVMNKKA 281
>gi|308126360|ref|ZP_07663727.1| chemotaxis protein LafU [Vibrio parahaemolyticus AQ4037]
gi|308109365|gb|EFO46905.1| chemotaxis protein LafU [Vibrio parahaemolyticus AQ4037]
Length = 161
Score = 36.7 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 40/112 (35%), Gaps = 8/112 (7%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS-----RNSSIALGLRRAY 107
F + P +L L E+ +I GH D + R S+ AL RA
Sbjct: 1 MFSRGGAELTPFFEDLLLALAPLFEQVTNPLIISGHTDAIPFKKRFGRQSNWALSASRAD 60
Query: 108 AVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
V G+ R M+VT DE ++NRR +F+ A
Sbjct: 61 VARKTLVEGGMPDDRVMQVTGMSDRALL--NPDEPDSSENRRIELFILTTPA 110
>gi|298369577|ref|ZP_06980894.1| cytochrome c oxidase, subunit II [Neisseria sp. oral taxon 014 str.
F0314]
gi|298282134|gb|EFI23622.1| cytochrome c oxidase, subunit II [Neisseria sp. oral taxon 014 str.
F0314]
Length = 159
Score = 36.7 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 20/139 (14%), Positives = 51/139 (36%), Gaps = 7/139 (5%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
+ + D + + + + +F + + L ++ +
Sbjct: 28 SASETVAPADVAPAEASASMPSENEAAVVVENGIVKFYFASGKSDLAAGAEDALKDVLAG 87
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
++ + G D+ G++ + L +RA+AV N + G++ +++++ PS
Sbjct: 88 VKAGKKAV-VSGFHDKTGNQALNEELSKQRAFAVKNALMGLGVAENQIELR-----KPSD 141
Query: 136 YGHDEDAYAKNRRAIVFLK 154
A+ RR V L+
Sbjct: 142 SEGSGS-KAEARRVEVVLE 159
>gi|299069796|emb|CBJ41076.1| Chemotaxis protein motB (Motility protein B), flagellar motor
protein [Ralstonia solanacearum CMR15]
Length = 314
Score = 36.3 bits (82), Expect = 1.2, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 39/119 (32%), Gaps = 7/119 (5%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR----NSSI 99
+ F +S ++P +L LG L + GH D S+
Sbjct: 156 QIVDQQNRPMFANASAEVQPYMRTILRELGVALNDVPNPISLSGHTDATQYATQNGYSNW 215
Query: 100 ALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A +A G+ ++ +V +P + NRR + + R
Sbjct: 216 ELSADRANASRRELIAGGMQPEKVARVVGLEASVPLD--KTDAFNPINRRISIVVLNNR 272
>gi|289208674|ref|YP_003460740.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
gi|288944305|gb|ADC72004.1| OmpA/MotB domain protein [Thioalkalivibrio sp. K90mix]
Length = 253
Score = 36.3 bits (82), Expect = 1.3, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 22/70 (31%), Gaps = 6/70 (8%)
Query: 90 DELGSRNSSIALGLRRAYAVFNY------FVARGISASRMKVTSYGKEMPSVYGHDEDAY 143
D + + ++ L RR AV + SR+ + ++ +
Sbjct: 158 DAMDAYFGNMDLSQRRTRAVLEHAYRLEPLQEDDWFRSRVAAVGLSSSRRVLDADGQEDH 217
Query: 144 AKNRRAIVFL 153
+RR +
Sbjct: 218 EASRRVEFSV 227
>gi|254797218|ref|YP_003082059.1| putative peptidoglycan-associated lipoprotein (PAL/OmpA)
[Neorickettsia risticii str. Illinois]
gi|254590467|gb|ACT69829.1| putative peptidoglycan-associated lipoprotein (PAL/OmpA)
[Neorickettsia risticii str. Illinois]
Length = 208
Score = 36.3 bits (82), Expect = 1.3, Method: Composition-based stats.
Identities = 10/47 (21%), Positives = 19/47 (40%)
Query: 105 RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
A ++ + S GK G E+A+A++RR ++
Sbjct: 153 PDSAAQTTPFSKDALRNHFCTASAGKNELVDEGDTEEAHARSRRVVI 199
>gi|271500049|ref|YP_003333074.1| OmpA/MotB domain-containing protein [Dickeya dadantii Ech586]
gi|270343604|gb|ACZ76369.1| OmpA/MotB domain protein [Dickeya dadantii Ech586]
Length = 376
Score = 36.3 bits (82), Expect = 1.3, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 11/123 (8%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRN-----SS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 147 QIIDSNNRPMFKTGSAQVEPYMSDILRAIAPILNDIPNKISLSGHTDDAQYAMGERGYSN 206
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPS--VYGHDEDAYAKNRRAIVFLKG 155
L RA A +A G++ + ++V M G + A NRR + +
Sbjct: 207 WELSADRANASRRELIAGGLADGKVLRVVGMADTMNLKQAKGGSD---AINRRISLVVLN 263
Query: 156 CRA 158
+A
Sbjct: 264 KQA 266
>gi|91794978|ref|YP_564629.1| OmpA/MotB [Shewanella denitrificans OS217]
gi|91716980|gb|ABE56906.1| OmpA/MotB [Shewanella denitrificans OS217]
Length = 330
Score = 36.3 bits (82), Expect = 1.3, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 51/135 (37%), Gaps = 9/135 (6%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSNLGSWLEKHDCD 82
+ SS + + + + + D++ F S ++ +L LG L +
Sbjct: 155 VQQSSMADNIAVTLVPQGIRILIHDNIDRFMFTRGSAQMQVYFEDLLLALGPVLGQVTNA 214
Query: 83 FLIEGHADELG---SRNSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGH 138
+I GH D + ++ L +RA G+ ++ ++VT + Y
Sbjct: 215 MVISGHTDSTPYVGTEFTNWELSSKRALLARRVLEFGGVKRNQVIQVTGMADQ--VAYIP 272
Query: 139 DEDAYAKNRRAIVFL 153
E A A NRR V +
Sbjct: 273 QEPAAAANRRIEVLI 287
>gi|289615186|emb|CBI57953.1| unnamed protein product [Sordaria macrospora]
Length = 174
Score = 36.3 bits (82), Expect = 1.3, Method: Composition-based stats.
Identities = 13/128 (10%), Positives = 34/128 (26%), Gaps = 3/128 (2%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
MQ +T + L+A ++S T V+ + +F+ + +
Sbjct: 1 MQLTTTLLPLAAFAATALSQTTPTPTIPEGYRKVILNTIKDAKFAVQAQTPIKSGSGIIL 60
Query: 61 IRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA 120
W++ + + AD ++ + + +
Sbjct: 61 FTVKATSPKPEQQWWIKDGNTKVQL---ADTNFCLDAGTGRSNGSPLTIQDCADTKASQK 117
Query: 121 SRMKVTSY 128
+ Y
Sbjct: 118 WLYQPEGY 125
>gi|52842529|ref|YP_096328.1| flagellar motor protein MotB [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52629640|gb|AAU28381.1| chemotaxis (motility protein B) transmembrane [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
Length = 312
Score = 36.3 bits (82), Expect = 1.3, Method: Composition-based stats.
Identities = 28/145 (19%), Positives = 50/145 (34%), Gaps = 12/145 (8%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGDS---VFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
D ++ L + + + D+ FD S I P +L+N+ L
Sbjct: 162 KDPSLAGLKKQLLMDVVSDGLRIQLIDNQKKPMFDVGSDKINPEIEPILANIAKLLNSVP 221
Query: 81 CDFLIEGHADELGSR------NSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMP 133
I+GH D ++ L +RA A + G+ ++ M VT Y +
Sbjct: 222 NKITIQGHTDANPYHNPEELEYTNWELSAQRANAARRALIKAGMDENKVMTVTGYSSTIL 281
Query: 134 SVYGHDEDAYAKNRRAIVFLKGCRA 158
+ +NRR + + A
Sbjct: 282 LDK-KNPYN-PENRRISIIVMKKGA 304
>gi|291529688|emb|CBK95274.1| hypothetical protein ERE_35370 [Eubacterium rectale M104/1]
Length = 452
Score = 36.3 bits (82), Expect = 1.3, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQE 42
M+ + +IL+ ++ +SG DT +P+TV E
Sbjct: 1 MKKKILALILAVSSIAVLSGCGKKDTAEITPETVKPVQYTDE 42
>gi|290474940|ref|YP_003467824.1| flagellar protein [Xenorhabdus bovienii SS-2004]
gi|289174257|emb|CBJ81046.1| enables flagellar motor rotation, linking torque machinery to cell
wall [Xenorhabdus bovienii SS-2004]
Length = 333
Score = 36.3 bits (82), Expect = 1.3, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 38/115 (33%), Gaps = 7/115 (6%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSSIALGLR 104
+ F S + +L + L + + GH D L S+ L
Sbjct: 155 NRPMFMIGSAKVESYMRDILQAIAPILNEIPNKVSLSGHTDNLQYANGQRGYSNWELSAD 214
Query: 105 RAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
RA A + G+ ++ +V + G D +A NRR + + A
Sbjct: 215 RANASRRELLNGGLDEVKILRVVGMASTVSMQKGIDPNA-PVNRRISIVVLNKDA 268
>gi|227876979|ref|ZP_03995072.1| peptidoglycan-binding protein [Lactobacillus crispatus JV-V01]
gi|256850592|ref|ZP_05556018.1| aggregation-promoting factor [Lactobacillus crispatus MV-1A-US]
gi|262047008|ref|ZP_06019967.1| aggregation-promoting factor [Lactobacillus crispatus MV-3A-US]
gi|312984250|ref|ZP_07791595.1| aggregation promoting protein [Lactobacillus crispatus CTV-05]
gi|33321488|gb|AAQ06498.1| aggregation promoting factor [Lactobacillus crispatus]
gi|48926947|gb|AAT47510.1| aggregation-promoting factor [Lactobacillus crispatus]
gi|227863405|gb|EEJ70831.1| peptidoglycan-binding protein [Lactobacillus crispatus JV-V01]
gi|256712615|gb|EEU27610.1| aggregation-promoting factor [Lactobacillus crispatus MV-1A-US]
gi|260572585|gb|EEX29146.1| aggregation-promoting factor [Lactobacillus crispatus MV-3A-US]
gi|310894345|gb|EFQ43422.1| aggregation promoting protein [Lactobacillus crispatus CTV-05]
Length = 223
Score = 36.3 bits (82), Expect = 1.3, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 41/104 (39%), Gaps = 7/104 (6%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ +I + A+T +S++G+ + ++ + E+ +V D+ +SY
Sbjct: 1 MKIKSILVKSIAVTALSVTGLVAANNNTNTAQAAIVENDTAVVTVKNVSDNAITVYNSYK 60
Query: 61 IRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLR 104
A Q L++ SW +I+ D G + +
Sbjct: 61 NPEATGQTLASNTSWK-------VIKTAYDAKGHKWYDLGKNQW 97
>gi|300697987|ref|YP_003748648.1| Chemotaxis protein motB (Motility protein B), flagellar motor
protein [Ralstonia solanacearum CFBP2957]
gi|299074711|emb|CBJ54269.1| Chemotaxis protein motB (Motility protein B), flagellar motor
protein [Ralstonia solanacearum CFBP2957]
Length = 314
Score = 36.3 bits (82), Expect = 1.4, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 40/119 (33%), Gaps = 7/119 (5%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ F +S ++P +L LG+ L + GH D S+
Sbjct: 156 QIVDQQNRPMFGNASAEVQPYMRTILRELGAALNDVPNPISLSGHTDATQYATQNGYSNW 215
Query: 100 ALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A +A G+ ++ +V +P + NRR + + R
Sbjct: 216 ELSADRANASRRELIAGGMKPEKVARVVGLEASVPLD--KTDAFNPINRRISIVVLNNR 272
>gi|239781764|pdb|2ZOV|A Chain A, Structure Of The Periplasmic Domain Of Motb From
Salmonella (Crystal Form I)
Length = 210
Score = 36.3 bits (82), Expect = 1.4, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 39/121 (32%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 65 QIIDSQNRPXFKTGSAEVEPYXRDILRAIAPVLNGIPNRISLAGHTDDFPYANGEKGYSN 124
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A VA G+ + ++V +D A NRR + + +
Sbjct: 125 WELSADRANASRRELVAGGLDNGKVLRVVGXAATXRLSDRGPDD--AINRRISLLVLNKQ 182
Query: 158 A 158
A
Sbjct: 183 A 183
>gi|16125820|ref|NP_420384.1| chemotaxis MotB protein [Caulobacter crescentus CB15]
gi|221234581|ref|YP_002517017.1| chemotaxis motB protein [Caulobacter crescentus NA1000]
gi|13422964|gb|AAK23552.1| chemotaxis MotB protein [Caulobacter crescentus CB15]
gi|220963753|gb|ACL95109.1| chemotaxis motB protein [Caulobacter crescentus NA1000]
Length = 298
Score = 36.3 bits (82), Expect = 1.4, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 36/123 (29%), Gaps = 11/123 (8%)
Query: 39 SLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL--- 92
E + D F +S +L + + + I GH
Sbjct: 168 QTPEGLRIQLVDQEGRSMFKENSREPNDRARVLLRAVAKVINQLPNRVTISGHTSANAFG 227
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPS-VYGHDEDAYAKNRRAI 150
++ AL +RA A + G+ R+ +V+ P NRR
Sbjct: 228 KKQDGDWALSAQRADASRQVLRSAGVDDDRVYQVSGKANSEPLYADDPTLAG---NRRIS 284
Query: 151 VFL 153
+ L
Sbjct: 285 IVL 287
>gi|17549629|ref|NP_522969.1| flagellar motor protein MotB [Ralstonia solanacearum GMI1000]
gi|17431883|emb|CAD18561.1| probable chemotaxis (motility protein b) transmembrane [Ralstonia
solanacearum GMI1000]
Length = 314
Score = 36.3 bits (82), Expect = 1.4, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 39/119 (32%), Gaps = 7/119 (5%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR----NSSI 99
+ F +S ++P +L LG L + GH D S+
Sbjct: 156 QIVDQQNRPMFANASAEVQPYMRTILRELGVALNDVPNPISLSGHTDATQYATQNGYSNW 215
Query: 100 ALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A +A G+ ++ +V +P + NRR + + R
Sbjct: 216 ELSADRANASRRELIAGGMKPEKVARVVGLEASVPLD--KTDAFNPINRRISIVVLNNR 272
>gi|120613045|ref|YP_972723.1| OmpA/MotB domain-containing protein [Acidovorax citrulli AAC00-1]
gi|120591509|gb|ABM34949.1| OmpA/MotB domain protein [Acidovorax citrulli AAC00-1]
Length = 312
Score = 36.3 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 44/128 (34%), Gaps = 11/128 (8%)
Query: 40 LQEQFSSSV---GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR- 95
+ + + FD+ S ++P +L +GS L + + GH D
Sbjct: 156 TPDGLQIQIVDDQNRPMFDSGSALVKPYMRDILREIGSALGGVENRISLAGHTDAAPYGN 215
Query: 96 ----NSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAI 150
S+ L RA A VA G+ +++ +V + A NRR
Sbjct: 216 GDRGYSNWELSADRANASRRELVAAGMPDAKLGRVVGLAASDLLEP-DNPRA-PVNRRIT 273
Query: 151 VFLKGCRA 158
+ + A
Sbjct: 274 ITILTKEA 281
>gi|160880476|ref|YP_001559444.1| alpha amylase catalytic region [Clostridium phytofermentans ISDg]
gi|160429142|gb|ABX42705.1| alpha amylase catalytic region [Clostridium phytofermentans ISDg]
Length = 575
Score = 36.3 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 13/93 (13%), Positives = 32/93 (34%), Gaps = 2/93 (2%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDS-VFFDTSSY 59
M+ + + I +++ S D + + +ES +++ + G V D +
Sbjct: 1 MRKKILLLSCLIIVLLAASACKKADVNQNPSELNQDESQKEKEENDDEGTPEVSQDETKA 60
Query: 60 SIRPADIQVLSNLGSWLEKHDCDFLIEGHADEL 92
I +Q L+ + + + D
Sbjct: 61 VIPYDYVQNLNIIDDNYRNFY-EIFVYSFYDSN 92
>gi|83747601|ref|ZP_00944638.1| Probable chemotaxis motB protein [Ralstonia solanacearum UW551]
gi|207738644|ref|YP_002257037.1| chemotaxis protein (motility protein b) [Ralstonia solanacearum
IPO1609]
gi|83725781|gb|EAP72922.1| Probable chemotaxis motB protein [Ralstonia solanacearum UW551]
gi|206592012|emb|CAQ58918.1| chemotaxis protein (motility protein b) [Ralstonia solanacearum
IPO1609]
Length = 314
Score = 36.3 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 40/119 (33%), Gaps = 7/119 (5%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR----NSSI 99
+ F +S ++P +L LGS L + GH D S+
Sbjct: 156 QIVDQQNRPMFANASAEVQPYMRTILRELGSALNDVPNPISLSGHTDATQYATQNGYSNW 215
Query: 100 ALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A +A G+ ++ +V +P + NRR + + R
Sbjct: 216 ELSADRANASRRELIAGGMKPEKVARVVGLEASVPLD--KTDAFNPINRRISIVVLNNR 272
>gi|293380828|ref|ZP_06626865.1| single-strand binding protein [Lactobacillus crispatus 214-1]
gi|290922592|gb|EFD99557.1| single-strand binding protein [Lactobacillus crispatus 214-1]
Length = 223
Score = 36.3 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 41/104 (39%), Gaps = 7/104 (6%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ +I + A+T +S++G+ + ++ + E+ +V D+ +SY
Sbjct: 1 MKIKSILVKSIAVTALSVTGLVAANNNTNTAQAAIVENDTAVVTVKNVSDNAITVYNSYK 60
Query: 61 IRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLR 104
A Q L++ SW +I+ D G + +
Sbjct: 61 NPEATGQTLASNTSWK-------VIKTAYDAKGHKWYDLGKNQW 97
>gi|187478167|ref|YP_786191.1| flagellar motor protein MotB [Bordetella avium 197N]
gi|115422753|emb|CAJ49281.1| chemotaxis protein [Bordetella avium 197N]
Length = 324
Score = 36.3 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 40/120 (33%), Gaps = 8/120 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGL 103
+ F T S ++P +L LG L I GH D A
Sbjct: 155 QIVDSQNRPMFATGSAQVQPYMRDILRELGPVLNDLPNKVSISGHTDATQYARRERAYSN 214
Query: 104 R-----RAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
RA A VA G++ + M++ M V D A A NRR + + +
Sbjct: 215 WELSTDRANASRQELVAGGMTEGKVMRIQGLASSMSIVK-DDPYA-AVNRRISLVVLNEK 272
>gi|241763663|ref|ZP_04761713.1| OmpA/MotB domain protein [Acidovorax delafieldii 2AN]
gi|241367138|gb|EER61504.1| OmpA/MotB domain protein [Acidovorax delafieldii 2AN]
Length = 310
Score = 36.3 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 44/123 (35%), Gaps = 11/123 (8%)
Query: 40 LQEQFSSSV---GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD-----E 91
+ + + FD+ S ++P +L +G+ L + + GH D
Sbjct: 156 TPDGLQIQIVDNQNRPMFDSGSALVKPYMRDILREIGAALGGVENRISLAGHTDAAPYGN 215
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAI 150
S+ L RA A V+ G+ +++ +V + A A NRR
Sbjct: 216 SDRGYSNWELSADRANASRRELVSAGMPDAKLGRVVGLAASDLLEP-DNPRAPA-NRRIT 273
Query: 151 VFL 153
+ +
Sbjct: 274 ITV 276
>gi|262375753|ref|ZP_06068985.1| OmpA/MotB [Acinetobacter lwoffii SH145]
gi|262309356|gb|EEY90487.1| OmpA/MotB [Acinetobacter lwoffii SH145]
Length = 215
Score = 36.3 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 13/32 (40%), Gaps = 2/32 (6%)
Query: 120 ASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
A+R+ V YG P D NRR +
Sbjct: 177 ANRVVVAGYGDSRPLNGIDPSDGR--NRRVEI 206
>gi|332981763|ref|YP_004463204.1| CUT1 family carbohydrate ABC transporter substrate-binding protein
[Mahella australiensis 50-1 BON]
gi|332699441|gb|AEE96382.1| carbohydrate ABC transporter substrate-binding protein, CUT1 family
[Mahella australiensis 50-1 BON]
Length = 438
Score = 36.3 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 14/150 (9%), Positives = 44/150 (29%), Gaps = 10/150 (6%)
Query: 1 MQYSTIFIILSAITM---MSISGIDNLDTKISSPDTVLNESSLQ--EQFSSSVGDSVFFD 55
M + ++L+A+ + +S G + + + + + +S +V +
Sbjct: 1 MNKRLLALVLAAVMLVFVLSACGGSQTSDNGTGDNAAETQPGSEGTDNSASEEAITVTYA 60
Query: 56 TSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA 115
+ + + + + +D+ + + + V+
Sbjct: 61 RGKDTTTANQKMLEAFEAKYPNIKINYQEMPPQSDQQHNAFVTALSAGDDSVDVYRL--- 117
Query: 116 RGISASRMKVTSYGKEMPSVYGHDEDAYAK 145
I + + + P E+ AK
Sbjct: 118 DIIWPAEFAAAGWVE--PLDDYFTEEERAK 145
>gi|293395565|ref|ZP_06639848.1| chemotaxis MotB protein [Serratia odorifera DSM 4582]
gi|291421884|gb|EFE95130.1| chemotaxis MotB protein [Serratia odorifera DSM 4582]
Length = 330
Score = 36.3 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 38/120 (31%), Gaps = 8/120 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS-----RNSS 98
+ F T S + +L + L + GH D+L S+
Sbjct: 148 QIIDSQNRPMFTTGSAQVESYMRDILRAIAPILNDLPNKISLSGHTDDLPYATGERYYSN 207
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A +A G+S + ++V M A NRR + + +
Sbjct: 208 WELSADRANASRRELIAGGLSEGKVLRVVGMAATMSLK--QHGADDAINRRITILVLNKQ 265
>gi|300694372|ref|YP_003750345.1| chemotaxis protein motb (motility protein b), flagellar motor
protein [Ralstonia solanacearum PSI07]
gi|299076409|emb|CBJ35725.1| Chemotaxis protein motB (Motility protein B), flagellar motor
protein [Ralstonia solanacearum PSI07]
Length = 314
Score = 36.3 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 40/119 (33%), Gaps = 7/119 (5%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR----NSSI 99
+ F +S ++P +L LG+ L + GH D S+
Sbjct: 156 QIVDQQNRPMFANASAEVQPYMRTILRELGAALNDVPNPISLSGHTDATQYATQNGYSNW 215
Query: 100 ALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A +A G+ ++ +V +P + NRR + + R
Sbjct: 216 ELSADRANASRRELIAGGMKPEKVARVVGLEASVPLD--KTDAFNPINRRISIVVLNNR 272
>gi|253688988|ref|YP_003018178.1| OmpA/MotB domain protein [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251755566|gb|ACT13642.1| OmpA/MotB domain protein [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 350
Score = 35.9 bits (81), Expect = 1.6, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 39/121 (32%), Gaps = 7/121 (5%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + P +L + L I GH D++ S+
Sbjct: 149 QIIDSQNRPMFKTGSAQVEPYMRDILRAIAPILNDFPNKLSISGHTDDVQYTTGERGYSN 208
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A + G+S + ++V M A NRR + + +
Sbjct: 209 WELSADRANASRRELIFGGLSDGKVLRVVGMAATMNLKQ-ATGGNDAINRRISLLVLSRQ 267
Query: 158 A 158
A
Sbjct: 268 A 268
>gi|163854227|ref|YP_001642270.1| OmpA/MotB domain-containing protein [Methylobacterium extorquens
PA1]
gi|218533172|ref|YP_002423988.1| OmpA/MotB domain protein [Methylobacterium chloromethanicum CM4]
gi|240141687|ref|YP_002966167.1| putative chemotaxis protein MotB [Methylobacterium extorquens AM1]
gi|163665832|gb|ABY33199.1| OmpA/MotB domain protein [Methylobacterium extorquens PA1]
gi|218525475|gb|ACK86060.1| OmpA/MotB domain protein [Methylobacterium chloromethanicum CM4]
gi|240011664|gb|ACS42890.1| putative chemotaxis protein MotB [Methylobacterium extorquens AM1]
Length = 277
Score = 35.9 bits (81), Expect = 1.6, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 39/136 (28%), Gaps = 10/136 (7%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD 82
+++ + + ++ S+ D F S ++L L L K
Sbjct: 130 PEVAELSKNVIIAPNRKGLDVSIVDQDGRSMFPEGSSRPNDRTRRLLERLAPTLMKLPNR 189
Query: 83 FLIEGHADELG----SRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYG 137
+ G L RA +V + G+ R VT P
Sbjct: 190 IAVTGFTATTRPGTRDTAPPWELSANRALSVRDVLAGAGLPDDRFASVTGKADTEPMFP- 248
Query: 138 HDEDAYAKNRRAIVFL 153
+ A NRR V L
Sbjct: 249 DNPY-LAANRRVTVTL 263
>gi|59713902|ref|YP_206677.1| hypothetical protein VF_A0719 [Vibrio fischeri ES114]
gi|59482150|gb|AAW87789.1| hypothetical protein VF_A0719 [Vibrio fischeri ES114]
Length = 1613
Score = 35.9 bits (81), Expect = 1.6, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 45/123 (36%), Gaps = 21/123 (17%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLE--------KHDCDFLIEGHADELGSRNSSIALGL 103
+ F +S + + S++ E D I+GHA +GS ++ +
Sbjct: 643 INFKFNSSELPNTGTTLRSDIDKVCEKIAELLKTHPDYRIQIDGHAGRIGSDKANKTIAE 702
Query: 104 RRAYAVFNYFVAR----GISASRMKVTSYGKEMPSVYGH---------DEDAYAKNRRAI 150
RA V + + R+ S+G P G+ D+ A A++RR
Sbjct: 703 DRAKQVEQAILDKAKEDNTLPERIITLSHGNTQPISAGNAKVDMSETGDDSALAEDRRVE 762
Query: 151 VFL 153
+ L
Sbjct: 763 ISL 765
>gi|168333865|ref|ZP_02692108.1| hypothetical protein Epulo_03110 [Epulopiscium sp. 'N.t. morphotype
B']
Length = 229
Score = 35.9 bits (81), Expect = 1.6, Method: Composition-based stats.
Identities = 29/195 (14%), Positives = 57/195 (29%), Gaps = 44/195 (22%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDS----------- 51
IFI++S M I+ + L +S + + + GD
Sbjct: 31 LMIIFILISIGFMARINDQSTDEQSKVIASYXLVKSEINDDLMRAFGDQLEMLNMEITSG 90
Query: 52 ---------VFFDTSSYSIRPADIQVLSN--------LGSWLEKHDCDFLIEGHA----- 89
V F+T ++ +L + + ++ + IEGH
Sbjct: 91 STIXFDSPEVLFETGQAALNDTFKSILDKFFPIYLDLIYNNYKEVIKEIRIEGHTSTEWG 150
Query: 90 ---DELGSRNSSIALGLRRAYAVFNYFVA-------RGISASRMKVTSYGKEMPSVYGHD 139
D + +++ L R V Y + R + M P +
Sbjct: 151 NQIDVNKAYFNNMELSQDRTREVLEYVINLPSSAPYRDWLIANMTANGLSSSRPIIDPKT 210
Query: 140 E-DAYAKNRRAIVFL 153
+ + K+RR +
Sbjct: 211 GLEDHIKSRRVEFKI 225
>gi|304395571|ref|ZP_07377454.1| OmpA/MotB domain protein [Pantoea sp. aB]
gi|304356865|gb|EFM21229.1| OmpA/MotB domain protein [Pantoea sp. aB]
Length = 235
Score = 35.9 bits (81), Expect = 1.6, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 43/125 (34%), Gaps = 22/125 (17%)
Query: 51 SVFFDTSSYSIRPADIQVLS-------NLGSWLEKHDCDFLIEGHADELGS--------R 95
V F S ++P ++L+ + ++H + IEGH +
Sbjct: 97 DVLFGLGSSELKPKFKEILNDFFPRYLRVLDQYKQHITEVRIEGHTSTDWTGAANQDVAY 156
Query: 96 NSSIALGLRRAYAVFNYFVA-------RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRR 148
+++ L R AV Y + + S+ Y P + +++ ++RR
Sbjct: 157 FNNMELSQGRTRAVLQYVYSLKESETHQKWVKSKFAAVGYSSSHPILDAAEKEDPNRSRR 216
Query: 149 AIVFL 153
+
Sbjct: 217 VTFKV 221
>gi|262066601|ref|ZP_06026213.1| conserved hypothetical protein [Fusobacterium periodonticum ATCC
33693]
gi|291379665|gb|EFE87183.1| conserved hypothetical protein [Fusobacterium periodonticum ATCC
33693]
Length = 343
Score = 35.9 bits (81), Expect = 1.6, Method: Composition-based stats.
Identities = 17/116 (14%), Positives = 39/116 (33%), Gaps = 4/116 (3%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDT---- 56
M+ + FII+ + ++S + + +T +++ + D + F
Sbjct: 1 MKKTIFFIIILQLFLLSCNKEETKIQDQPVQETSSTNIDTKKKEIEKLRDDLKFGLMGID 60
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
S Y A + L NLG ++ + ++ + + V Y
Sbjct: 61 SKYQENRAQYKELINLGYDDKQAFEIVYCDFILEKWAYETAESDITDYSFDDVVRY 116
>gi|45656163|ref|YP_000249.1| hypothetical protein LIC10258 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45599396|gb|AAS68886.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 589
Score = 35.9 bits (81), Expect = 1.6, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 30/79 (37%)
Query: 76 LEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSV 135
E ++ H+ G + RA YF ++ + R+ YG+ +P +
Sbjct: 510 NEFPGYKIELQSHSSHQGDEEVNQVGTEERAREALEYFFSKTVPFGRIHFRGYGETLPLI 569
Query: 136 YGHDEDAYAKNRRAIVFLK 154
G + KN+R +L
Sbjct: 570 PGSGKYEADKNQRIDFYLS 588
>gi|299133120|ref|ZP_07026315.1| OmpA/MotB domain protein [Afipia sp. 1NLS2]
gi|298593257|gb|EFI53457.1| OmpA/MotB domain protein [Afipia sp. 1NLS2]
Length = 345
Score = 35.9 bits (81), Expect = 1.6, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 49/122 (40%), Gaps = 6/122 (4%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-----KHD 80
+ S D + S++++ S D++ F+T S+ I P L + +
Sbjct: 199 ERPYSLDEIRYSPSVRQRMPSIDLDTINFETGSWDISPDQAAKLQVIADGMNRAIQHNPQ 258
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA-SRMKVTSYGKEMPSVYGHD 139
FLIEGH D +G+ +++L RRA + + + YG++ V
Sbjct: 259 TVFLIEGHTDAVGNDVDNLSLSDRRAESAAELLTQQFGVPAENLTSQGYGEQYLKVPSDG 318
Query: 140 ED 141
+
Sbjct: 319 PE 320
>gi|170702223|ref|ZP_02893126.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
gi|170132858|gb|EDT01283.1| OmpA/MotB domain protein [Burkholderia ambifaria IOP40-10]
Length = 233
Score = 35.9 bits (81), Expect = 1.7, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 46/137 (33%), Gaps = 12/137 (8%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS---IRPADIQVLSNLGSW--LEKHD 80
P V+ + + + F I+P L + S
Sbjct: 92 QCGVPPQLVVATPAPVAEKPIVLAADALFAFDKADVDAIKPEGRAELDEIASKLSAAPSV 151
Query: 81 CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE 140
+ G+ D LGS + AL RRA V Y ++G++A ++ GK +P
Sbjct: 152 RHVDVVGYTDRLGSDEYNAALSQRRAETVKWYLTSQGVTA-QIDARGDGKVLPGTACEMR 210
Query: 141 D------AYAKNRRAIV 151
+ A +RR +
Sbjct: 211 NRAELIRCLAPDRRVEI 227
>gi|254463910|ref|ZP_05077321.1| outer membrane protein, OmpA/MotB family [Rhodobacterales bacterium
Y4I]
gi|206684818|gb|EDZ45300.1| outer membrane protein, OmpA/MotB family [Rhodobacterales bacterium
Y4I]
Length = 694
Score = 35.9 bits (81), Expect = 1.7, Method: Composition-based stats.
Identities = 34/98 (34%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-----FLIEGHADELGSRNSSIALGLR 104
DSV FDT S IRP + + L+ LG+ L FLIEGH D +G+ ++AL R
Sbjct: 578 DSVNFDTGSAVIRPQEAEELATLGNALRDLIDRNPAEVFLIEGHTDAVGAATYNLALSDR 637
Query: 105 RAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDED 141
RA V M V YG+ +V D +
Sbjct: 638 RAETVALALTEYFDVPPENMVVQGYGESDLAVSTLDAE 675
>gi|186477722|ref|YP_001859192.1| flagellar motor protein MotB [Burkholderia phymatum STM815]
gi|184194181|gb|ACC72146.1| OmpA/MotB domain protein [Burkholderia phymatum STM815]
Length = 369
Score = 35.9 bits (81), Expect = 1.7, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 43/122 (35%), Gaps = 12/122 (9%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSSI 99
F T+ ++P +L +G+ L +++GH D + S+
Sbjct: 172 IVDTQKRPMFATAQAIVQPYMHDILQAIGNTLNDVPNRIVVQGHTDAVPYAGGEKGYSNW 231
Query: 100 ALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPS--VYGHDEDAYAKNRRAIVFLKGC 156
L RA A +A G+ ++ ++V D + NRR + +
Sbjct: 232 ELSADRANASRRELIAGGMDEAKVLRVLGLASTQNLNKADPLDPE----NRRISIIVLNK 287
Query: 157 RA 158
R+
Sbjct: 288 RS 289
>gi|293402551|ref|ZP_06646686.1| hypothetical protein HMPREF0863_02829 [Erysipelotrichaceae
bacterium 5_2_54FAA]
gi|291304065|gb|EFE45319.1| hypothetical protein HMPREF0863_02829 [Erysipelotrichaceae
bacterium 5_2_54FAA]
Length = 241
Score = 35.9 bits (81), Expect = 1.7, Method: Composition-based stats.
Identities = 12/137 (8%), Positives = 35/137 (25%), Gaps = 4/137 (2%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ IF++LS ++ + ++ + + + D F
Sbjct: 1 MKKINIFLMLSLCILLGGCKSAKEEKAMTRE----KVKQVMLDYIENKYDEEFEVFGMDY 56
Query: 61 IRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA 120
+ V + K+ + E + + ++ Y + +
Sbjct: 57 KSWDNGGVETMYAYPKGKNPNYYFYVERTRENKITDDYVIFTMQEVYEKKAKKIIKKYYP 116
Query: 121 SRMKVTSYGKEMPSVYG 137
+ + P
Sbjct: 117 NAIVTVGIANSGPVPDN 133
>gi|269102040|ref|ZP_06154737.1| outer membrane protein A precursor [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268161938|gb|EEZ40434.1| outer membrane protein A precursor [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 339
Score = 35.9 bits (81), Expect = 1.7, Method: Composition-based stats.
Identities = 24/93 (25%), Positives = 36/93 (38%)
Query: 62 RPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISAS 121
+ + + + I G D +GS+ + + RA V Y A GI AS
Sbjct: 247 DYGRYNLNEVVATMNANPEVTAQIVGRTDAVGSKAINEKVSNARAQGVAEYLEANGIDAS 306
Query: 122 RMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
R+ V+S P V G+ A R + LK
Sbjct: 307 RLTVSSVANNDPLVAGNSNGANLIERSVQIILK 339
>gi|284046858|ref|YP_003397198.1| OmpA/MotB domain protein [Conexibacter woesei DSM 14684]
gi|283951079|gb|ADB53823.1| OmpA/MotB domain protein [Conexibacter woesei DSM 14684]
Length = 615
Score = 35.9 bits (81), Expect = 1.8, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 51/148 (34%), Gaps = 11/148 (7%)
Query: 16 MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSW 75
M+ +G + + + + + + F S +RP I+++ L
Sbjct: 471 MTGTGAAAVPDERDAVMDGA-VCDARAGSTVDLDSGALFAYDSVQLRPGAIELVEGLCER 529
Query: 76 LE-KHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMP 133
+ L+ G+ D G + L R+A V + + ++ R + V G+ P
Sbjct: 530 RLLEGAATLLVVGYTDATGPAAYNRVLSRRQAARVRDVLLGEAVTRPRTVVVRGLGEARP 589
Query: 134 SVYGHDEDAYAKNRRAIVFLKGC-RANT 160
G D R + ++ R T
Sbjct: 590 RTDGADN-------RIRIVVRPAPRGAT 610
>gi|170769416|ref|ZP_02903869.1| chemotaxis protein MotB [Escherichia albertii TW07627]
gi|170121740|gb|EDS90671.1| chemotaxis protein MotB [Escherichia albertii TW07627]
Length = 308
Score = 35.9 bits (81), Expect = 1.8, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 38/121 (31%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F S + P +L + L + GH D+ S+
Sbjct: 151 QIIDSQNRPMFKIGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYANGEKGYSN 210
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A A G+ + ++V M +D A NRR + + +
Sbjct: 211 WELSTERANASRRELAAGGLDDGKVLRVVGMAATMRLSDRGPDD--AINRRISLLVLNKQ 268
Query: 158 A 158
A
Sbjct: 269 A 269
>gi|254303828|ref|ZP_04971186.1| SpoIID-domain sporulation protein [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148324020|gb|EDK89270.1| SpoIID-domain sporulation protein [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 518
Score = 35.9 bits (81), Expect = 1.8, Method: Composition-based stats.
Identities = 19/147 (12%), Positives = 40/147 (27%), Gaps = 18/147 (12%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQF-------SSSVGDSVF 53
M+ I LSA+ ++S + K +P+ + ++ ++VF
Sbjct: 1 MKKKISLIFLSALILISCTNEPAKKVKTVTPNGDYKTGTTTTTNTERGNREKITLENTVF 60
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYF 113
V+ L + H F + G N AL + + +
Sbjct: 61 KKLGLPLPYNTFGAVIPYLVPVNDNHKESFGVFGEY------NEDKALKYFKNLSSRGHG 114
Query: 114 VARGISASRMKVT-----SYGKEMPSV 135
+ + S +
Sbjct: 115 DNSPYWRWKTSIKKSELYSKAESRLIA 141
>gi|291455725|ref|ZP_06595115.1| CotH protein [Bifidobacterium breve DSM 20213]
gi|291382653|gb|EFE90171.1| CotH protein [Bifidobacterium breve DSM 20213]
Length = 604
Score = 35.9 bits (81), Expect = 1.8, Method: Composition-based stats.
Identities = 18/164 (10%), Positives = 42/164 (25%), Gaps = 21/164 (12%)
Query: 4 STIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRP 63
I +++ + ++S +G + + + EQ S S+
Sbjct: 17 KQIAALIAMLMVLSCAGCATSSPSDNEQSQSSDSTQTHEQVKKSAEQSI------DGAHL 70
Query: 64 ADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRM 123
D + L + + G+ +S + V R +
Sbjct: 71 RDNESLYKVYDDSGVETMYLTVSRGNSSEGTDHSWSEINQYSVDDYAAMGVGRYKVNGLL 130
Query: 124 KV----------TSYGKEMPSVY-----GHDEDAYAKNRRAIVF 152
+V +G+ P+ KN + +
Sbjct: 131 QVGDEQGPVSGELGFGESAPNATVQVRGQSSSKNEQKNYKIELK 174
>gi|307131627|ref|YP_003883643.1| flagellar motor rotation protein motB [Dickeya dadantii 3937]
gi|306529156|gb|ADM99086.1| Flagellar motor rotation protein motB [Dickeya dadantii 3937]
Length = 376
Score = 35.9 bits (81), Expect = 1.8, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 40/123 (32%), Gaps = 11/123 (8%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRN-----SS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 147 QIIDSNNRPMFKTGSAQVEPYMSDILRAIAPILNDIPNKISLSGHTDDAQYAMGERGYSN 206
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPS--VYGHDEDAYAKNRRAIVFLKG 155
L RA A + G++ + ++V M G + A NRR + +
Sbjct: 207 WELSADRANASRRELIIGGLAEGKVLRVVGMADTMNLKQAKGGSD---AINRRISLVVLN 263
Query: 156 CRA 158
+A
Sbjct: 264 KQA 266
>gi|260555968|ref|ZP_05828188.1| small protein A [Acinetobacter baumannii ATCC 19606]
gi|260410879|gb|EEX04177.1| small protein A [Acinetobacter baumannii ATCC 19606]
Length = 259
Score = 35.9 bits (81), Expect = 1.8, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 44/129 (34%), Gaps = 10/129 (7%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSS--YSIRPADIQVLSNLGSWLEKHDCD--FLIEGH 88
N++ + + SV F S + + ++K ++ G
Sbjct: 129 GANNQAPARSTVIADCTASVLFAFDRFDASAIEEGTNSVVKIAEQIKKSPTTTPIIVSGF 188
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE------DA 142
D LG + + L +RA V V +G+ SR+++ + + D
Sbjct: 189 TDPLGKFSYNQELSSKRANTVAKLLVRQGVEPSRIQIQANSQTDLYKQCSDNNSSQLIQC 248
Query: 143 YAKNRRAIV 151
A NRR +
Sbjct: 249 LAPNRRVNI 257
>gi|71907423|ref|YP_285010.1| OmpA/MotB [Dechloromonas aromatica RCB]
gi|71847044|gb|AAZ46540.1| OmpA/MotB [Dechloromonas aromatica RCB]
Length = 156
Score = 35.9 bits (81), Expect = 1.8, Method: Composition-based stats.
Identities = 30/151 (19%), Positives = 57/151 (37%), Gaps = 18/151 (11%)
Query: 8 IILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQ 67
I+L+ + ++ + +S + + E + VFF + ++ AD
Sbjct: 20 IVLAVVAVVYGASAGKGYKPAASVVQQAEIAPVGEALA-----KVFFAVGAAALDEADKG 74
Query: 68 VL-SNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVT 126
V+ L + + L+ G D G + L RA +V + VA G++A R+K
Sbjct: 75 VVAKTLEALSANPNAIVLLSGFHDPSGDPAKNAELAKHRAQSVRDALVAAGVAAERIKFR 134
Query: 127 SYGKEMP---SVYGHDEDAYAKNRRAIVFLK 154
P G E+ RR + ++
Sbjct: 135 -----KPESTLGAGSPEEG----RRVEIRVQ 156
>gi|309789304|ref|ZP_07683895.1| chemotaxis motB domain protein [Shigella dysenteriae 1617]
gi|308922839|gb|EFP68355.1| chemotaxis motB domain protein [Shigella dysenteriae 1617]
Length = 137
Score = 35.9 bits (81), Expect = 1.8, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 39/112 (34%), Gaps = 8/112 (7%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSSIALGLRRAY 107
F T S + P +L + L + GH D+ S+ L RA
Sbjct: 1 MFKTGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSNWELSADRAN 60
Query: 108 AVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
A + G+ + + ++V M +D A NRR + + +A
Sbjct: 61 ASRRELMVGGLDSGKVLRVVGMAATMRLSDRGPDD--AVNRRISLLVLNKQA 110
>gi|65319635|ref|ZP_00392594.1| COG0760: Parvulin-like peptidyl-prolyl isomerase [Bacillus
anthracis str. A2012]
Length = 283
Score = 35.9 bits (81), Expect = 1.8, Method: Composition-based stats.
Identities = 9/56 (16%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 1 MQYSTIFI-ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFD 55
M+ +F+ + + ++++S + D + S + E L ++ G+S +
Sbjct: 1 MKKKKLFLGTIISCVVLALSACGSSDNVVXSKVGNITEKELSKELRQKYGESTLYQ 56
>gi|317505101|ref|ZP_07963047.1| hypothetical protein HMPREF9420_2355 [Prevotella salivae DSM
15606]
gi|315663812|gb|EFV03533.1| hypothetical protein HMPREF9420_2355 [Prevotella salivae DSM
15606]
Length = 509
Score = 35.9 bits (81), Expect = 1.8, Method: Composition-based stats.
Identities = 8/44 (18%), Positives = 19/44 (43%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQF 44
M+ +I + L A+ ++++S + + S L + L
Sbjct: 20 MKKKSILLSLVALCVLALSSCSDKNDAPSFSSQALQNAELVNVL 63
>gi|312881216|ref|ZP_07741014.1| outer membrane protein A [Vibrio caribbenthicus ATCC BAA-2122]
gi|309371108|gb|EFP98562.1| outer membrane protein A [Vibrio caribbenthicus ATCC BAA-2122]
Length = 343
Score = 35.9 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 53/146 (36%), Gaps = 8/146 (5%)
Query: 3 YSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIR 62
+ + + + MS SS + V N + + + +++F+ + +
Sbjct: 191 FIGLSYAFGSSSKMSAPSQHQEVNVSSSMEHVTNVDAGESANTVQEI-TIYFEFDNSKLS 249
Query: 63 PADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASR 122
+ L S + I D LGS+ + L +RA +V + G+ S+
Sbjct: 250 SVSEKKLKAFVSTVLPSQ-QISIFASTDTLGSKIYNDKLSFKRAMSVRTILLESGLDKSQ 308
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRR 148
+++ + G+ H A RR
Sbjct: 309 IEIIALGES------HSASAKPATRR 328
>gi|74317262|ref|YP_315002.1| flagellar motor protein MotB [Thiobacillus denitrificans ATCC
25259]
gi|74056757|gb|AAZ97197.1| outer membrane chemotaxis MotB protein [Thiobacillus denitrificans
ATCC 25259]
Length = 319
Score = 35.9 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 37/122 (30%), Gaps = 12/122 (9%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F+ +S ++P +L + L + + GH D S+
Sbjct: 161 QIVDEQNRPMFNLASAELQPYTKVILHEIAQVLNDVENRISLSGHTDARPYANGERGYSN 220
Query: 99 IALGLRRAYAVFNYFV-ARGISASRMKVTSYGKEMPS--VYGHDEDAYAKNRRAIVFLKG 155
L RA A + A ++V +P D NRR + +
Sbjct: 221 WELSADRANASRRELIVGGMSEAKMLRVVGLASSVPFTQAKPFDPV----NRRISIIVLN 276
Query: 156 CR 157
R
Sbjct: 277 KR 278
>gi|253723681|ref|YP_003023967.1| putative outer membrane protein [Photobacterium damselae subsp.
piscicida]
gi|251752745|dbj|BAH83618.1| putative outer membrane protein [Photobacterium damselae subsp.
piscicida]
Length = 150
Score = 35.9 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 24/141 (17%), Positives = 41/141 (29%), Gaps = 2/141 (1%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLS 70
S T +++S S N + V +V S R V +
Sbjct: 4 SICTFLALS-CLAFTVPAMSGTNDYNNYNNNNAMREVVSRTVSVSFGESSTRFRPGPV-A 61
Query: 71 NLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK 130
+ I G L L RA + NY VA+G+S ++ +
Sbjct: 62 KVMLETALDASMITINGRTSTNKPSKRDENLALARAVSARNYLVAQGVSPLKIMINYVSA 121
Query: 131 EMPSVYGHDEDAYAKNRRAIV 151
+ + N+R +
Sbjct: 122 DDYLTENWTPEGRRINQRVDI 142
>gi|254419004|ref|ZP_05032728.1| OmpA family protein [Brevundimonas sp. BAL3]
gi|196185181|gb|EDX80157.1| OmpA family protein [Brevundimonas sp. BAL3]
Length = 297
Score = 35.9 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 40/137 (29%), Gaps = 11/137 (8%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD 82
+++ L E + D FD +S +L + + +
Sbjct: 150 PELAELSKQLIVDQTPEGLRIQLVDQEGRSMFDNNSARPNARAQVLLRAVAKVINQLPNR 209
Query: 83 FLIEGHAD-----ELGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVY 136
I GH S + L RA + G+ A R+ V P
Sbjct: 210 ISITGHTSATPGSNRASGPADWTLSSERANGSRLVLQSAGVDADRVYSVAGKAGSDPLYP 269
Query: 137 GHDEDAYAKNRRAIVFL 153
D+ A NRR + L
Sbjct: 270 --DDPTLAGNRRIAIVL 284
>gi|300904777|ref|ZP_07122605.1| chemotaxis protein MotB [Escherichia coli MS 84-1]
gi|301305233|ref|ZP_07211330.1| chemotaxis protein MotB [Escherichia coli MS 124-1]
gi|300403291|gb|EFJ86829.1| chemotaxis protein MotB [Escherichia coli MS 84-1]
gi|300839439|gb|EFK67199.1| chemotaxis protein MotB [Escherichia coli MS 124-1]
gi|315257277|gb|EFU37245.1| chemotaxis protein MotB [Escherichia coli MS 85-1]
Length = 308
Score = 35.9 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + P +L + L + GH D+ S+
Sbjct: 151 QIIDSQNRPMFRTGSADVEPYMRDILRAIAPVLNGIPNRISLSGHTDDFPYASGEKGYSN 210
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A + G+ + + ++V M +D A NRR + + +
Sbjct: 211 WELSADRANASRRELMVGGLDSGKVLRVVGMAATMCLSDRGPDD--AVNRRISLLVLNKQ 268
Query: 158 A 158
A
Sbjct: 269 A 269
>gi|313672809|ref|YP_004050920.1| rhodanese domain protein [Calditerrivibrio nitroreducens DSM
19672]
gi|312939565|gb|ADR18757.1| Rhodanese domain protein [Calditerrivibrio nitroreducens DSM
19672]
Length = 418
Score = 35.9 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 9/53 (16%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Query: 1 MQYSTIFIILSAITMMSISGIDNL-DTKISSPDTVLNESSLQEQFSSSVGDSV 52
M++ I + A ++++ G +++ P+ Q S G +V
Sbjct: 1 MKFKKILALFMACVVLALFGCAGAEKQQVAKPEAKQETKQEANQSGESKGKTV 53
>gi|302875501|ref|YP_003844134.1| OmpA/MotB domain-containing protein [Clostridium cellulovorans
743B]
gi|307687955|ref|ZP_07630401.1| OmpA/MotB domain-containing protein [Clostridium cellulovorans
743B]
gi|302578358|gb|ADL52370.1| OmpA/MotB domain protein [Clostridium cellulovorans 743B]
Length = 233
Score = 35.9 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 37/124 (29%), Gaps = 16/124 (12%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLG---------SWLEKHDCDFLIEGHADELGSRNS 97
+ V F Y + +++ + ++GH D +
Sbjct: 93 EIKTEVLFQVDKYELTGEGVKIAKEVSEAFYTLFSNPVYRDKIKYVEVKGHTDNTFLADY 152
Query: 98 SIALGLRRAYAVFNYFV----ARGISASRMKVTSYGKEMPSV---YGHDEDAYAKNRRAI 150
+ L RA + N V A+ K + K P V G +NRR
Sbjct: 153 NRFLSTNRAASFVNAMVPNGSKYEEYAAYFKSSGMSKFEPKVGSVDGQSMVEQDQNRRIE 212
Query: 151 VFLK 154
+ ++
Sbjct: 213 INIE 216
>gi|296127841|ref|YP_003635093.1| OmpA/MotB domain protein [Brachyspira murdochii DSM 12563]
gi|296019657|gb|ADG72894.1| OmpA/MotB domain protein [Brachyspira murdochii DSM 12563]
Length = 371
Score = 35.9 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 46/134 (34%), Gaps = 9/134 (6%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
++++ + ++ + F SY +++ + + +L+ + +LI +
Sbjct: 18 ISKTDIGDKLYFLDNTDINFRLGSYGFDRFNLEKVKQVAMFLQANPNTYLIVEGHSDYRP 77
Query: 95 RNSSIA-------LGLRRAYAVFNYFVARGIS-ASRMKVTSYGKEMPSVYGHDED-AYAK 145
+ L RA A G + R+ YG P D+ + K
Sbjct: 78 FYNETPNGTSNVMLSYYRALAFSQQINEYGANLKDRLIPLGYGYTNPKYTERDDYYDHTK 137
Query: 146 NRRAIVFLKGCRAN 159
NRR + + +
Sbjct: 138 NRRLEFIVVESKKD 151
>gi|238919361|ref|YP_002932876.1| OmpA family protein [Edwardsiella ictaluri 93-146]
gi|238868930|gb|ACR68641.1| OmpA family protein [Edwardsiella ictaluri 93-146]
Length = 270
Score = 35.9 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 42/124 (33%), Gaps = 13/124 (10%)
Query: 40 LQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD-----E 91
E + D F S + P +L + L + + GH D
Sbjct: 145 TDEGLRIQIVDSQKRPMFKNGSAQVEPYMRYILRAIAPILNELPNKISLSGHTDDLPYAN 204
Query: 92 LGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYA-KNRRA 149
S+ L RA A +A G+ ++++ +V M H+ A +NRR
Sbjct: 205 GEKGYSNWELSADRANASRRELMAGGLDSNKILRVVGMADTMNL---HNMAGNAAENRRI 261
Query: 150 IVFL 153
+ +
Sbjct: 262 SILV 265
>gi|262375897|ref|ZP_06069128.1| copper homeostasis protein cutF [Acinetobacter lwoffii SH145]
gi|262308991|gb|EEY90123.1| copper homeostasis protein cutF [Acinetobacter lwoffii SH145]
Length = 164
Score = 35.9 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 7/90 (7%), Positives = 26/90 (28%), Gaps = 3/90 (3%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ T+ ++ + +++ + + ++ EQ + D+ S
Sbjct: 1 MKKLTLTAAIAVVLAGALTACSKPNDNEPMSNNAQPSPAMMEQNN---ADTSVNRADSAE 57
Query: 61 IRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
+ + ++ + D
Sbjct: 58 TSLDWAGEYEGVFPCADCEGIKVELDLNPD 87
>gi|268315879|ref|YP_003289598.1| PKD domain containing protein [Rhodothermus marinus DSM 4252]
gi|262333413|gb|ACY47210.1| PKD domain containing protein [Rhodothermus marinus DSM 4252]
Length = 317
Score = 35.9 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 31/146 (21%), Positives = 54/146 (36%), Gaps = 10/146 (6%)
Query: 13 ITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNL 72
+++S D++ S E+ + + VFFD +S + A L
Sbjct: 177 TVTLNVSNNAGSDSRTLSITVRPYEAEYCAD--VTEMNPVFFDRNSSVLNDAARSALQEN 234
Query: 73 GSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEM 132
L+ + + + L RA AV ++ + GI ASR+ S G
Sbjct: 235 LQILQDCP-NLSVRVEGWAAPGERNPQQLSTDRARAVEQFYTSNGIPASRITTVSRG--- 290
Query: 133 PSVYGHD--EDAYAKNRRAIVF-LKG 155
V G ++ A+ RRA ++G
Sbjct: 291 -RVTGVTSKKEGLAQYRRADTIPVRG 315
>gi|47565027|ref|ZP_00236070.1| conserved hypothetical protein protein [Bacillus cereus G9241]
gi|47557813|gb|EAL16138.1| conserved hypothetical protein protein [Bacillus cereus G9241]
Length = 123
Score = 35.6 bits (80), Expect = 2.1, Method: Composition-based stats.
Identities = 13/126 (10%), Positives = 37/126 (29%), Gaps = 7/126 (5%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M++S + + +++ S + V + +E + ++VF
Sbjct: 5 MKFSMFMFLGVVLIILAACTTK-------SVEQVAVKEVPKEGYIILRNETVFLADDKTF 57
Query: 61 IRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA 120
++Q + LI D + + + + + +Y +
Sbjct: 58 ETKIELQNYIEQQMNQDYPSDIVLIFKDKDAYDQLKTGDKIKVWSSQTLESYPAKMIVEK 117
Query: 121 SRMKVT 126
+ V
Sbjct: 118 FEIVVK 123
>gi|117922218|ref|YP_871410.1| chemotaxis protein MotB-like protein [Shewanella sp. ANA-3]
gi|117614550|gb|ABK50004.1| chemotaxis protein MotB-related protein [Shewanella sp. ANA-3]
Length = 243
Score = 35.6 bits (80), Expect = 2.1, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 28/86 (32%), Gaps = 16/86 (18%)
Query: 82 DFLIEGHADELGSRNS---SIALGLRRAYAVFNYFVARGISASRMKV------------T 126
+EGH D G + L RA +++ + A ++ V +
Sbjct: 140 TVFVEGHTDSNGIWYRGKGNWGLSTDRAVSIWKLWQTEINVAPKLSVLTNYNGQLLFSVS 199
Query: 127 SYGKEMPSV-YGHDEDAYAKNRRAIV 151
Y E+ A+NRR +
Sbjct: 200 GYADTRRVDLQETTEEQRARNRRIDI 225
>gi|94500541|ref|ZP_01307072.1| motility protein, MotA family protein [Oceanobacter sp. RED65]
gi|94427331|gb|EAT12310.1| motility protein, MotA family protein [Oceanobacter sp. RED65]
Length = 336
Score = 35.6 bits (80), Expect = 2.1, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 43/145 (29%), Gaps = 14/145 (9%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
N ++ L +E + D F+ S ++ +L + L+
Sbjct: 133 NASATLTPYKDQLKVDITREGLRIQIVDKTNRPMFNPGSSRLKYYAEDILYEMAPILQAV 192
Query: 80 DCDFLIEGHADE----LGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMP- 133
I GH D + L RA A G+ + ++ +V G +
Sbjct: 193 PNRISITGHTDSSGSANPWDTGNWELSAGRANAARRALADAGLDSEKIAQVVGMGDKAHF 252
Query: 134 -SVYGHDEDAYAKNRRAIVFLKGCR 157
D NRR + + R
Sbjct: 253 NIEDPTDPV----NRRIAIVVLNKR 273
>gi|238026965|ref|YP_002911196.1| OmpA/MotB [Burkholderia glumae BGR1]
gi|237876159|gb|ACR28492.1| OmpA/MotB [Burkholderia glumae BGR1]
Length = 312
Score = 35.6 bits (80), Expect = 2.2, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 57/157 (36%), Gaps = 13/157 (8%)
Query: 12 AITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQV 68
A+ ++ + + + K+ + + S+ +E + D F T S + +
Sbjct: 134 ALLKQQLTALVDENPKLKAFKNQIRLSTTREGLRIEIVDSRSRPMFATGSSRLEDYAYDI 193
Query: 69 LSNLGSWLEKHDCDFLIEGHADELGSR-----NSSIALGLRRAYAVFNYFVARGISASRM 123
L +G L + D + GH D + S+ L RA A VA + ++
Sbjct: 194 LFQIGGVLNQVDNRVSLAGHTDAVPYSGGIAGYSNWELSSERANAARRALVAGHLREDKL 253
Query: 124 -KVTSYGKEMPSVYG-HDEDAYAKNRRAIVFLKGCRA 158
+V +P G D + NRR + + A
Sbjct: 254 LQVRGLADVLPFDRGVADAE---VNRRISILVLNKEA 287
>gi|167647023|ref|YP_001684686.1| OmpA/MotB domain-containing protein [Caulobacter sp. K31]
gi|167349453|gb|ABZ72188.1| OmpA/MotB domain protein [Caulobacter sp. K31]
Length = 299
Score = 35.6 bits (80), Expect = 2.2, Method: Composition-based stats.
Identities = 23/151 (15%), Positives = 40/151 (26%), Gaps = 11/151 (7%)
Query: 11 SAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQ 67
A S+ +++ + E + D F +S
Sbjct: 141 FASAAQSLRQSLQDMPELAELSKQIMIDQTPEGLRIQLIDQDGRSMFKENSREPNDRARI 200
Query: 68 VLSNLGSWLEKHDCDFLIEGHADELGSRNS---SIALGLRRAYAVFNYFVARGISASRM- 123
+L + + + I GH + AL RA A G+ R+
Sbjct: 201 LLRAIAKIINQLPNRITISGHTSASAAGKRADSDWALSAERADASRQVLRGAGVDEDRIY 260
Query: 124 KVTSYGKEMPS-VYGHDEDAYAKNRRAIVFL 153
+V+ P NRR + L
Sbjct: 261 QVSGKANSEPLYADDPTLAG---NRRISIVL 288
>gi|312963125|ref|ZP_07777610.1| chemotaxis MotB protein [Pseudomonas fluorescens WH6]
gi|311282636|gb|EFQ61232.1| chemotaxis MotB protein [Pseudomonas fluorescens WH6]
Length = 229
Score = 35.6 bits (80), Expect = 2.2, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 22/64 (34%), Gaps = 4/64 (6%)
Query: 92 LGSRNSSIALGLRRAYAVFNYFVAR--GISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
+ + L RA + A R+ V YG P G D + A NRR
Sbjct: 158 CTVYDDNYTLSAARAREARKLLIQAIEPQQARRVVVAGYGDSRP-KPGIDPAS-ALNRRV 215
Query: 150 IVFL 153
V L
Sbjct: 216 EVQL 219
>gi|302383636|ref|YP_003819459.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
gi|302194264|gb|ADL01836.1| OmpA/MotB domain protein [Brevundimonas subvibrioides ATCC 15264]
Length = 298
Score = 35.6 bits (80), Expect = 2.2, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 42/137 (30%), Gaps = 11/137 (8%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD 82
+++ L E + D FD +S +L + + +
Sbjct: 151 PELAELSKQLIIDQTPEGLRIQLVDQEGRSMFDQNSARPNARAQVLLRAIAGVVNRLPNR 210
Query: 83 FLIEGHADE-----LGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVY 136
I GH S + L RA A A G+ A R+ V P
Sbjct: 211 ISISGHTSAVAGSGRASVATDWPLSANRADASRAILQAAGVDADRVYSVAGKAGSDPLYP 270
Query: 137 GHDEDAYAKNRRAIVFL 153
D+ + A NRR + L
Sbjct: 271 --DDPSLAGNRRIAIVL 285
>gi|282877841|ref|ZP_06286653.1| OmpA family protein [Prevotella buccalis ATCC 35310]
gi|281300052|gb|EFA92409.1| OmpA family protein [Prevotella buccalis ATCC 35310]
Length = 313
Score = 35.6 bits (80), Expect = 2.2, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 54/147 (36%), Gaps = 12/147 (8%)
Query: 9 ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQV 68
++ A + + + ++ P + VFF+ SS ++
Sbjct: 177 VIMAAPLEETATESAQNHELVQPAQTAKIAPFDTNI-----RQVFFEISSDALSKEAKHT 231
Query: 69 LSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTS 127
L L L+ + + G + + G + + L +RR +V Y + +G+ A+++ S
Sbjct: 232 LDGLAETLKNNRKLKAELTGFSSQDGPKAFNRDLAMRRMNSVRTYLLKKGVHANQVSALS 291
Query: 128 YGKEMPSVYGHDEDAYAKNRRAIVFLK 154
YG + S RR V +
Sbjct: 292 YGIDKHSEMNTYA------RRVEVCVS 312
>gi|269316833|gb|ACZ37399.1| VP6 protein precursor [Eumenes pomiformis]
Length = 62
Score = 35.6 bits (80), Expect = 2.3, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Query: 1 MQYSTIFIILSAITMMSI---SGIDNLDTKISSPDTVLNESSLQEQFSSSVG 49
M+ +++FI+ + I +M+ +G + + +P V E F +G
Sbjct: 1 MKSTSVFILFAGIAIMACLQMTGTEAAPSASPNPTPVARADPDPEAFGPVIG 52
>gi|332361115|gb|EGJ38919.1| D-alanyl-D-alanine carboxypeptidase [Streptococcus sanguinis
SK1056]
Length = 270
Score = 35.6 bits (80), Expect = 2.3, Method: Composition-based stats.
Identities = 13/108 (12%), Positives = 32/108 (29%), Gaps = 2/108 (1%)
Query: 1 MQYSTIFIILSAITMMSIS--GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSS 58
M+YS + + +++ ++ G D + ++ S + S
Sbjct: 11 MKYSKLIFLAASVLVLGACSSGKDTTGDSSDKQAASSTSTVKKQDAEKDKKSSQDTASES 70
Query: 59 YSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRA 106
+ L + + + ++G DE+ N L
Sbjct: 71 TDTKKEQNHEDKTLDQNVSYNGSYYSVKGKYDEILVVNKHYPLSASYN 118
>gi|296101384|ref|YP_003611530.1| putative outer membrane lipoprotein [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295055843|gb|ADF60581.1| putative outer membrane lipoprotein [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 313
Score = 35.6 bits (80), Expect = 2.3, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 43/122 (35%), Gaps = 12/122 (9%)
Query: 45 SSSVGDSVFFDT---SSYSIRPADIQVLSNLGSWLE--KHDCDFLIEGHADELGSRNSSI 99
+ + V F ++ I L + + + + + I G+ D +GSR ++
Sbjct: 190 VVLIQEQVLFRFAASNAAGIFAESRNKLDEVVKFTKKANNVSEIQIVGYTDAIGSREANQ 249
Query: 100 ALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAK-----N-RRAIVF 152
L RA V + + +GI + T G + + N RR +
Sbjct: 250 RLSEARADTVRSLLIEKGIKPELINNTTGKGIAQSAEGCGTSASQQAAGCNVNSRRVEIL 309
Query: 153 LK 154
+K
Sbjct: 310 VK 311
>gi|333029776|ref|ZP_08457837.1| OmpA/MotB domain protein [Bacteroides coprosuis DSM 18011]
gi|332740373|gb|EGJ70855.1| OmpA/MotB domain protein [Bacteroides coprosuis DSM 18011]
Length = 389
Score = 35.6 bits (80), Expect = 2.3, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 44/100 (44%), Gaps = 7/100 (7%)
Query: 31 PDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
P+ V E+S + VFF ++ D+ + + ++ D + + G+AD
Sbjct: 277 PEVVYKETSAND------SRVVFFQIGKSNLTSRDLVTVQMMAESIKATDKTYKVVGYAD 330
Query: 91 E-LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG 129
GS+ + L RA AV + + G+ S+++V G
Sbjct: 331 SATGSKALNQRLSEARANAVKDALIKEGVKESQLEVVGMG 370
>gi|172057495|ref|YP_001813955.1| hypothetical protein Exig_1478 [Exiguobacterium sibiricum 255-15]
gi|171990016|gb|ACB60938.1| hypothetical protein Exig_1478 [Exiguobacterium sibiricum 255-15]
Length = 123
Score = 35.6 bits (80), Expect = 2.4, Method: Composition-based stats.
Identities = 18/129 (13%), Positives = 41/129 (31%), Gaps = 6/129 (4%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ IFI+LS+I + + + + + D V+ +
Sbjct: 1 MKKQLIFILLSSICLTAGCARETETISTTDIIAKEARQDQSADL-IRIHDRVYKRSGKDM 59
Query: 61 IRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA 120
+ L ++ + ++ E AD + + + +V +G A
Sbjct: 60 TIVK--KDLVSITTVQKQLSGK---EALADRTATDWPKGTKLYQSKNSTGELYVFQGTVA 114
Query: 121 SRMKVTSYG 129
R + + G
Sbjct: 115 FRYEAIAEG 123
>gi|222823652|ref|YP_002575226.1| hypothetical protein Cla_0646 [Campylobacter lari RM2100]
gi|222538874|gb|ACM63975.1| conserved hypothetical protein [Campylobacter lari RM2100]
Length = 350
Score = 35.6 bits (80), Expect = 2.4, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 38/100 (38%), Gaps = 3/100 (3%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
+F ++ N E I+G+AD+ GS ++ +GL RA V
Sbjct: 250 LFERNGYSEYSNENLLEKINQNLAREDIIKRIKIQGYADDRGSTFANYMIGLNRAMNVAK 309
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
+F + +++ S GK+ + NR+ +
Sbjct: 310 HFFSFTEV---IEIESLGKDTYPTKDKSDSQRQNNRKVEI 346
>gi|228471124|ref|ZP_04055948.1| HmuY' [Porphyromonas uenonis 60-3]
gi|228307132|gb|EEK16193.1| HmuY' [Porphyromonas uenonis 60-3]
Length = 220
Score = 35.6 bits (80), Expect = 2.4, Method: Composition-based stats.
Identities = 5/71 (7%), Positives = 22/71 (30%), Gaps = 3/71 (4%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDS---VFFDTS 57
M+ + + + + +T++ + + + E + ++ D V+ +
Sbjct: 1 MKKTILLSLAALMTLLLCASCKSDKNEPKPVPNPSQEKGMTKKIVVDASDYTKWVYINFD 60
Query: 58 SYSIRPADIQV 68
+
Sbjct: 61 KGEVVSVSTPE 71
>gi|281425909|ref|ZP_06256822.1| hypothetical protein HMPREF0971_02890 [Prevotella oris F0302]
gi|281399972|gb|EFB30803.1| hypothetical protein HMPREF0971_02890 [Prevotella oris F0302]
Length = 221
Score = 35.6 bits (80), Expect = 2.4, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 33/75 (44%), Gaps = 7/75 (9%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVL---NESSLQEQFSSSVGDSVFFDT- 56
M++ + FI+++ I M + TK+ DT L + +++ ++ DS+++ T
Sbjct: 1 MKFLSSFIVITFICMSACCQTIKSPTKVGDMDTCLVDFTKHDFPQKWENNTIDSIYWITF 60
Query: 57 ---SSYSIRPADIQV 68
Y + +
Sbjct: 61 LSNDRYFESLSSMPQ 75
>gi|326319083|ref|YP_004236755.1| OmpA/MotB domain-containing protein [Acidovorax avenae subsp.
avenae ATCC 19860]
gi|323375919|gb|ADX48188.1| OmpA/MotB domain protein [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 312
Score = 35.6 bits (80), Expect = 2.4, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 11/128 (8%)
Query: 40 LQEQFSSSV---GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR- 95
+ + + FD+ S ++P +L +G+ L + + GH D
Sbjct: 156 TPDGLQIQIVDDQNRPMFDSGSALVKPYMRDILREIGAALGGVENRISLAGHTDAAPYGN 215
Query: 96 ----NSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAI 150
S+ L RA A VA G+ +++ +V + NRR
Sbjct: 216 GDRGYSNWELSADRANASRRELVAAGMPDAKLGRVVGLAASDLLEPENPRA--PVNRRIT 273
Query: 151 VFLKGCRA 158
+ + A
Sbjct: 274 ITVLTKEA 281
>gi|229161626|ref|ZP_04289606.1| hypothetical protein bcere0009_24120 [Bacillus cereus R309803]
gi|228621871|gb|EEK78717.1| hypothetical protein bcere0009_24120 [Bacillus cereus R309803]
Length = 124
Score = 35.6 bits (80), Expect = 2.4, Method: Composition-based stats.
Identities = 7/50 (14%), Positives = 19/50 (38%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD 50
M + F++ S S++ + T + +Q++ S ++
Sbjct: 7 MMKKSAFLLCSLCLSFSMTACEQTKEVKQQTATSSTVTEIQQKESININH 56
>gi|209883450|ref|YP_002287307.1| OmpA/MotB [Oligotropha carboxidovorans OM5]
gi|209871646|gb|ACI91442.1| OmpA/MotB [Oligotropha carboxidovorans OM5]
Length = 323
Score = 35.6 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 6/122 (4%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD--- 82
+ S D + S++++ S D++ F+T S+ I P L + + +
Sbjct: 177 ERPYSLDEIRYSPSVRQRMPSIDLDTINFETGSWDIPPDQAAKLQVIADGMNRAIQRNPQ 236
Query: 83 --FLIEGHADELGSRNSSIALGLRRAYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHD 139
FLIEGH D +GS +++L RRA + + + + YG++ V
Sbjct: 237 TVFLIEGHTDAVGSDVDNLSLSDRRAESAAELLTQQFGVPPENLTSQGYGEQYLKVATDG 296
Query: 140 ED 141
+
Sbjct: 297 AE 298
>gi|294784477|ref|ZP_06749766.1| conserved hypothetical protein [Fusobacterium sp. 3_1_27]
gi|294487693|gb|EFG35052.1| conserved hypothetical protein [Fusobacterium sp. 3_1_27]
Length = 419
Score = 35.6 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 10/94 (10%), Positives = 20/94 (21%), Gaps = 2/94 (2%)
Query: 1 MQYSTI-FIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSY 59
M+ I F IL+ +M + + + +G V S
Sbjct: 1 MKMKKILFSILAVFILMVAVACGKKEAPTEDANAQQEAAGEVVTQDYHIG-IVTTSVSQS 59
Query: 60 SIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG 93
+ + + D
Sbjct: 60 EDNFRGAEAVVKQYGSSNDEGGKITVVTVPDNFM 93
>gi|237741316|ref|ZP_04571797.1| lipoprotein [Fusobacterium sp. 4_1_13]
gi|229430848|gb|EEO41060.1| lipoprotein [Fusobacterium sp. 4_1_13]
Length = 419
Score = 35.6 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 10/94 (10%), Positives = 21/94 (22%), Gaps = 2/94 (2%)
Query: 1 MQYSTI-FIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSY 59
M+ I F +L+ +M + + +S +G V S
Sbjct: 1 MKMKKILFSLLAVFILMVAVACGKKEAPTEDANAQQEAASEVVTQDYHIG-IVTTSVSQS 59
Query: 60 SIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG 93
+ + + D
Sbjct: 60 EDNFRGAEAVVKQYGSSNDEGGKITVVTVPDNFM 93
>gi|313157808|gb|EFR57219.1| OmpA family protein [Alistipes sp. HGB5]
Length = 376
Score = 35.6 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 28/130 (21%), Positives = 52/130 (40%), Gaps = 10/130 (7%)
Query: 27 KISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE-KHDCDFLI 85
K + +T + + + + +++FF S IR + + L +L+ + + I
Sbjct: 252 KPAVKETPAPAPAAVAERPAELRENIFFRIGSSQIRTTEEAKVGALVEYLKANPEANVEI 311
Query: 86 EGHADE-LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKE-MPSVYGHDEDAY 143
G+AD GS ++ + RA +V GI+ASR+ G P
Sbjct: 312 VGYADAATGSHAVNLKISKLRAESVAAALKKAGIAASRISAEGRGDTAQPF------PGV 365
Query: 144 AKNRRAIVFL 153
KN R + +
Sbjct: 366 EKN-RVSICI 374
>gi|171057687|ref|YP_001790036.1| OmpA/MotB domain-containing protein [Leptothrix cholodnii SP-6]
gi|170775132|gb|ACB33271.1| OmpA/MotB domain protein [Leptothrix cholodnii SP-6]
Length = 320
Score = 35.6 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 45/120 (37%), Gaps = 7/120 (5%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR----NSSI 99
+ FD+ + ++P ++L +GS L + +EGH D S+
Sbjct: 163 QIVDEQNRPMFDSGASEVKPYMREILRAIGSVLTEVPNRLTLEGHTDAKPMGSGAGYSNW 222
Query: 100 ALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
L RA A +A G+ +R ++V +P D NRR + + A
Sbjct: 223 ELSSDRANASRRELLAGGLDDARVLRVQGLAASVPF-DQQDPLN-PINRRISIIVMTREA 280
>gi|260909461|ref|ZP_05916166.1| immunoreactive antigen PG33 [Prevotella sp. oral taxon 472 str.
F0295]
gi|260636428|gb|EEX54413.1| immunoreactive antigen PG33 [Prevotella sp. oral taxon 472 str.
F0295]
Length = 174
Score = 35.6 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 53/139 (38%), Gaps = 13/139 (9%)
Query: 19 SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK 78
+ +N K + E+ +F ++ F + D+ + + + ++
Sbjct: 43 AASENARLKNMLANQQPAETKTIREFVTTPVSVFFNINKTNIASQKDLVNVQAVAKYAKE 102
Query: 79 HDCDFLIEGHADE-LGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYG---KEMPS 134
++ + + G+AD GS N + L +RA V N V G+S R+ G P
Sbjct: 103 NNSNINVVGYADSATGSANVNQVLSDKRAETVANELVKMGVSRDRISTVGKGGVDDLSPI 162
Query: 135 VYGHDEDAYAKNRRAIVFL 153
+ NRRA V +
Sbjct: 163 ---------SFNRRATVQI 172
>gi|156394517|ref|XP_001636872.1| predicted protein [Nematostella vectensis]
gi|156223979|gb|EDO44809.1| predicted protein [Nematostella vectensis]
Length = 214
Score = 35.6 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 9/107 (8%), Positives = 27/107 (25%), Gaps = 1/107 (0%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ +I ++ A+ +++ G + + + E V D + S
Sbjct: 67 MKLFSILLLFLAVFILNACGEEKVAEE-EPLGKPKAAEESSESAPPPVEDENKYKLGSLC 125
Query: 61 IRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
+ ++ + S ++
Sbjct: 126 NYCSYCKLCKLCDKDCPCKTSRKKPNCDLCKYCKYCSLCSVCDVACK 172
>gi|184157314|ref|YP_001845653.1| small protein A [Acinetobacter baumannii ACICU]
gi|332876511|ref|ZP_08444276.1| OmpA family protein [Acinetobacter baumannii 6014059]
gi|183208908|gb|ACC56306.1| Small protein A (tmRNA-binding) [Acinetobacter baumannii ACICU]
gi|322507199|gb|ADX02653.1| small protein A (tmRNA-binding) [Acinetobacter baumannii 1656-2]
gi|323517176|gb|ADX91557.1| small protein A (tmRNA-binding) [Acinetobacter baumannii
TCDC-AB0715]
gi|332735280|gb|EGJ66342.1| OmpA family protein [Acinetobacter baumannii 6014059]
Length = 259
Score = 35.2 bits (79), Expect = 2.7, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 7/106 (6%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGSRNSSIALGLRRAYAVFN 111
F + +I V+ + ++ G D LG + + L +RA V
Sbjct: 152 FERFDASAIEEGTNSVVKIAEQIKKSPTTTPIIVSGFTDPLGKFSYNQELSSKRANTVAK 211
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDE------DAYAKNRRAIV 151
V +G+ SR+++ + + D A NRR +
Sbjct: 212 LLVRQGVEPSRIQIQANSQTDLYKQCSDNNSSQLIQCLAPNRRVNI 257
>gi|300312289|ref|YP_003776381.1| flagellar motor component protein [Herbaspirillum seropedicae SmR1]
gi|300075074|gb|ADJ64473.1| flagellar motor component protein [Herbaspirillum seropedicae SmR1]
Length = 312
Score = 35.2 bits (79), Expect = 2.8, Method: Composition-based stats.
Identities = 20/121 (16%), Positives = 37/121 (30%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F +S ++P ++L +G L + GH D S+
Sbjct: 162 QIVDEKNRPMFALASAQLQPYTKEILHEIGRTLNDVPNKISLSGHTDATPYSKGEKGYSN 221
Query: 99 IALGLRRAYAVFNYFV-ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A + + ++V + D NRR + + +
Sbjct: 222 WELSADRANASRRELIIGGMDESKVLRVVGLSSAVLLDK-EDPFN-PINRRISIIVMNKK 279
Query: 158 A 158
A
Sbjct: 280 A 280
>gi|167755061|ref|ZP_02427188.1| hypothetical protein CLORAM_00565 [Clostridium ramosum DSM 1402]
gi|167705111|gb|EDS19690.1| hypothetical protein CLORAM_00565 [Clostridium ramosum DSM 1402]
Length = 230
Score = 35.2 bits (79), Expect = 2.8, Method: Composition-based stats.
Identities = 11/122 (9%), Positives = 39/122 (31%), Gaps = 3/122 (2%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M + + L+ M +++ + D+ P+ + +++ + + + +
Sbjct: 1 MLKKLLTVGLALTMMFAVTACSSKDSDSDKPNDNNTSDNTKQERPFTESNGLIKYFTIND 60
Query: 61 IRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA 120
+ + + +LEK + D S + + + ++ Y +
Sbjct: 61 EKICLPETVGEYVKYLEKIGTKVEL---GDTGKSVDEAPKVDAGGISSMVAYLKVYLDDS 117
Query: 121 SR 122
Sbjct: 118 DW 119
>gi|120603975|ref|YP_968375.1| OmpA/MotB domain-containing protein [Desulfovibrio vulgaris DP4]
gi|120564204|gb|ABM29948.1| OmpA/MotB domain protein [Desulfovibrio vulgaris DP4]
Length = 259
Score = 35.2 bits (79), Expect = 2.8, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 28/107 (26%), Gaps = 14/107 (13%)
Query: 59 YSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSSIALGLRRAYAVFNYF 113
YS + ++ +EGH D + + L +RA + +
Sbjct: 138 YSGKADAPAPDECRDNYKPGRLEAVFVEGHTDNVPMPPRGGIQDNWDLSTKRAVTTYRHL 197
Query: 114 ---------VARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
V+ Y P A+NRR +
Sbjct: 198 LGHAPTLAAFVNLDGDPLFGVSGYAASRPRNPHDTPTPDAQNRRIDL 244
>gi|225375221|ref|ZP_03752442.1| hypothetical protein ROSEINA2194_00846 [Roseburia inulinivorans
DSM 16841]
gi|225212888|gb|EEG95242.1| hypothetical protein ROSEINA2194_00846 [Roseburia inulinivorans
DSM 16841]
Length = 366
Score = 35.2 bits (79), Expect = 2.8, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 24/52 (46%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSV 52
M+ I + ++ + + S++ T +S +T E+ Q Q S D++
Sbjct: 1 MKNKFIILTITGLLLASLAACGGSKTPDASKNTADQEAQNQNQDSQGTSDTI 52
>gi|224536907|ref|ZP_03677446.1| hypothetical protein BACCELL_01783 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521462|gb|EEF90567.1| hypothetical protein BACCELL_01783 [Bacteroides cellulosilyticus
DSM 14838]
Length = 320
Score = 35.2 bits (79), Expect = 2.8, Method: Composition-based stats.
Identities = 9/94 (9%), Positives = 28/94 (29%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ + + L ++ + + ++ + D V++ ++S
Sbjct: 1 MKKNLFLVCLFMFGTLASCQCSSKKSADNAVVNTTETPVPLGDPFILLHDGVYYAYGTHS 60
Query: 61 IRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+ + +L +W + AD
Sbjct: 61 NKGIEFYTSDDLLTWKYGGLALNKEDSWADRWFW 94
>gi|67921866|ref|ZP_00515383.1| Manganese-stabilizing protein/photosystem II polypeptide
[Crocosphaera watsonii WH 8501]
gi|67856458|gb|EAM51700.1| Manganese-stabilizing protein/photosystem II polypeptide
[Crocosphaera watsonii WH 8501]
Length = 275
Score = 35.2 bits (79), Expect = 2.8, Method: Composition-based stats.
Identities = 11/82 (13%), Positives = 31/82 (37%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M++ + I A+ + I+ + ++P + + L +++ F S +
Sbjct: 1 MRFRALLIAFFALCLGLITACSDGPDSTANPQDLTYDEILNTGIANNCPQISEFTRGSLA 60
Query: 61 IRPADIQVLSNLGSWLEKHDCD 82
I P + +L +++
Sbjct: 61 IEPGQTYFVDDLCLQPQEYFVK 82
>gi|331001973|ref|ZP_08325493.1| hypothetical protein HMPREF0491_00355 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330411769|gb|EGG91174.1| hypothetical protein HMPREF0491_00355 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 560
Score = 35.2 bits (79), Expect = 2.9, Method: Composition-based stats.
Identities = 11/111 (9%), Positives = 31/111 (27%), Gaps = 2/111 (1%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M I I L + + + + + + + E +S + ++ +
Sbjct: 1 MFKKKILISLFLSVAIIATACSGGGKQNKTDNNSSSANDKSENNKNSSIKNTYWIANQEE 60
Query: 61 IRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
L + + C + G D S + + + + +
Sbjct: 61 GDWKRSVEL--IFNDDGSFHCRSITGGDIDSYCSHVDADSYTWIQNSDMID 109
>gi|311279213|ref|YP_003941444.1| OmpA/MotB domain-containing protein [Enterobacter cloacae SCF1]
gi|308748408|gb|ADO48160.1| OmpA/MotB domain protein [Enterobacter cloacae SCF1]
Length = 309
Score = 35.2 bits (79), Expect = 2.9, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 41/121 (33%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + P +L + L + + GH D+ S+
Sbjct: 152 QIIDSQNRPMFKTGSAEVEPYMRDILRAIAPVLNEIPNKISLSGHTDDYQYANGDRGYSN 211
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A VA G+ + ++V M +D A NRR + + +
Sbjct: 212 WELSAERANASRRELVAGGLDDGKVLRVVGMANTMKLQEHGGDD--AINRRISLLVLNNQ 269
Query: 158 A 158
A
Sbjct: 270 A 270
>gi|294635726|ref|ZP_06714192.1| chemotaxis MotB protein [Edwardsiella tarda ATCC 23685]
gi|291090938|gb|EFE23499.1| chemotaxis MotB protein [Edwardsiella tarda ATCC 23685]
Length = 332
Score = 35.2 bits (79), Expect = 2.9, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 39/126 (30%), Gaps = 14/126 (11%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F S + P +L + L + + GH D+L S+
Sbjct: 152 QIIDSQNRPMFQNGSARVEPYMRDILRAIAPILNELPNKISLSGHTDDLPYANGERGYSN 211
Query: 99 IALGLRRAYAVFNYFVARGISASRM-KVTSYGKE---MPSVYGHDEDAYAKNRRAIVFLK 154
L RA A V G++ +++ +V A NRR + +
Sbjct: 212 WELSADRANASRRELVIGGLAGNKILRVVGMADTMNLRHLAGNA-----AVNRRISILVL 266
Query: 155 GCRANT 160
A +
Sbjct: 267 TKAAQS 272
>gi|285019703|ref|YP_003377414.1| flagellar motor protein [Xanthomonas albilineans GPE PC73]
gi|283474921|emb|CBA17420.1| probable flagellar motor protein [Xanthomonas albilineans]
Length = 383
Score = 35.2 bits (79), Expect = 2.9, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 41/117 (35%), Gaps = 13/117 (11%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD----ELGSRNSSIALGLRR 105
+ FD S ++P +L L ++ + I GH D + S+ L R
Sbjct: 171 NRPMFDLGSAVLKPYTRGILHELSGFINQVPNHISITGHTDVTQYSGKNGYSNWELSADR 230
Query: 106 AYAVFNYFVARGISASRMK-VTSYGKEMPS---VYGHDEDAYAKNRRAIVFLKGCRA 158
A A VA G+S ++ V + V + NRR + + A
Sbjct: 231 ANAARRELVAGGMSEDKVSRVVGLSSSVLFDKQVPNN-----PINRRISIVVMTKDA 282
>gi|237735213|ref|ZP_04565694.1| predicted protein [Mollicutes bacterium D7]
gi|229380958|gb|EEO31049.1| predicted protein [Coprobacillus sp. D7]
Length = 230
Score = 35.2 bits (79), Expect = 2.9, Method: Composition-based stats.
Identities = 11/122 (9%), Positives = 39/122 (31%), Gaps = 3/122 (2%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M + + L+ M +++ + D+ P+ + +++ + + + +
Sbjct: 1 MLKKLLTVGLALTMMFAVTACSSKDSDSDKPNDNNTSDNTKQERPFTESNGLIKYFTIND 60
Query: 61 IRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA 120
+ + + +LEK + D S + + + ++ Y +
Sbjct: 61 EKICLPETVGEYVKYLEKIGTKVEL---GDTGKSVDEAPKVDAGGISSMVAYLKVYLDDS 117
Query: 121 SR 122
Sbjct: 118 DW 119
>gi|309778972|ref|ZP_07673742.1| bacterial outer membrane protein [Ralstonia sp. 5_7_47FAA]
gi|308922319|gb|EFP67946.1| bacterial outer membrane protein [Ralstonia sp. 5_7_47FAA]
Length = 315
Score = 35.2 bits (79), Expect = 2.9, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 40/120 (33%), Gaps = 7/120 (5%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG----SRNSSI 99
+ F +S ++P +L LGS L + GH D S+
Sbjct: 156 QIVDQQNRPMFANASAEVQPYMRTILRELGSALNDVPNPISLSGHTDATQYATQHGYSNW 215
Query: 100 ALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
L RA A VA G+ ++ V +P + NRR + + RA
Sbjct: 216 ELSADRANASRRELVAGGMKPEKVSRVVGLEASVPLDKAN--IYNPINRRISIVVLNARA 273
>gi|33592172|ref|NP_879816.1| flagellar motor protein MotB [Bordetella pertussis Tohama I]
gi|33596124|ref|NP_883767.1| flagellar motor protein MotB [Bordetella parapertussis 12822]
gi|33601523|ref|NP_889083.1| flagellar motor protein MotB [Bordetella bronchiseptica RB50]
gi|33571817|emb|CAE41326.1| chemotaxis protein MotB [Bordetella pertussis Tohama I]
gi|33573127|emb|CAE36772.1| chemotaxis protein MotB [Bordetella parapertussis]
gi|33575959|emb|CAE33038.1| chemotaxis protein MotB [Bordetella bronchiseptica RB50]
gi|332381588|gb|AEE66435.1| flagellar motor protein MotB [Bordetella pertussis CS]
Length = 315
Score = 35.2 bits (79), Expect = 3.0, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 38/111 (34%), Gaps = 8/111 (7%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLR---- 104
+ F T S ++P +L LG L I GH D A
Sbjct: 162 QNRPMFATGSADVQPYMRDILRELGPVLNDLPNKISIAGHTDASQYARGERAYSNWELSA 221
Query: 105 -RAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA A VA G+ + +++ M V D A A NRR + +
Sbjct: 222 DRANASRQELVAGGMHEGKVLRIQGLASSMSLVK-DDPFA-AVNRRISLVV 270
>gi|42781422|ref|NP_978669.1| peptidylprolyl isomerase [Bacillus cereus ATCC 10987]
gi|42737344|gb|AAS41277.1| protein export protein prsA [Bacillus cereus ATCC 10987]
Length = 283
Score = 35.2 bits (79), Expect = 3.0, Method: Composition-based stats.
Identities = 8/56 (14%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 1 MQYSTIFI-ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFD 55
M+ +F+ + + ++++S + ++S + E L ++ G+S +
Sbjct: 1 MKKKKLFLGTIISCVVLALSACGSSGNVVTSKVGNVTEKELSKELRQKYGESTLYQ 56
>gi|325299222|ref|YP_004259139.1| OmpA/MotB domain-containing protein [Bacteroides salanitronis DSM
18170]
gi|324318775|gb|ADY36666.1| OmpA/MotB domain protein [Bacteroides salanitronis DSM 18170]
Length = 370
Score = 35.2 bits (79), Expect = 3.0, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 46/129 (35%), Gaps = 10/129 (7%)
Query: 28 ISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSI-RPADIQVLSNLGSWLEKHDCDFLIE 86
+ + + + ++FF +S I +V + + E D +
Sbjct: 247 VVEEKKEEPAPAPEPVKVQPMRQNIFFLINSSEIRTSEQSKVNNLIAYLKEHTDAKVSLC 306
Query: 87 GHAD-ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGK-EMPSVYGHDEDAYA 144
G+AD G+ + L RA AV A GI+A R+ + G E P E+
Sbjct: 307 GYADKNTGNARINKKLSQERAEAVAEALKAEGIAADRITIDYKGDTEQPF--NVIEEN-- 362
Query: 145 KNRRAIVFL 153
R + +
Sbjct: 363 ---RVTICI 368
>gi|309774927|ref|ZP_07669946.1| hypothetical protein HMPREF0983_00405 [Erysipelotrichaceae
bacterium 3_1_53]
gi|308917324|gb|EFP63045.1| hypothetical protein HMPREF0983_00405 [Erysipelotrichaceae
bacterium 3_1_53]
Length = 190
Score = 35.2 bits (79), Expect = 3.1, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 44/134 (32%), Gaps = 13/134 (9%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ + F+I+ + + + I ++ N +F+ VG++ F+ ++S S
Sbjct: 1 MKKLSHFVIIMVLFCLFGASIKAVE----------NRFPNNAKFTRGVGNTCFWVSNSAS 50
Query: 61 IRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRA--YAVFNYFVARGI 118
A I+ + +D + + + A V Y
Sbjct: 51 KYKASIRTRAQNW-MYTGYDNKIYMTEVSSNYATHMDFYAKSSDSVIKGKVLGYTAYYDG 109
Query: 119 SASRMKVTSYGKEM 132
+ +R+ G
Sbjct: 110 NGNRLSPLGKGPSK 123
>gi|83648052|ref|YP_436487.1| flagellar motor protein [Hahella chejuensis KCTC 2396]
gi|83636095|gb|ABC32062.1| Flagellar motor protein [Hahella chejuensis KCTC 2396]
Length = 328
Score = 35.2 bits (79), Expect = 3.1, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 46/142 (32%), Gaps = 10/142 (7%)
Query: 24 LDTKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHD 80
+ K+++ L E + D FD+ ++P ++L L + K
Sbjct: 131 KNPKLNAFKDQLLLDITDEGLRIQIVDKRQRPMFDSGRSELQPYFEEILFELAKSIAKVR 190
Query: 81 CDFLIEGHADELG----SRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSV 135
+ GH D S+ L RA A V G+ RM +V +
Sbjct: 191 NKISVSGHTDAQPFLGRDNYSNWELSADRANAARRALVEGGLPEGRMARVVGLASSV-LF 249
Query: 136 YGHDEDAYAKNRRAIVFLKGCR 157
D NRR + + +
Sbjct: 250 DEKDPYN-PVNRRISILVLNKK 270
>gi|269138690|ref|YP_003295391.1| flagellar motor protein [Edwardsiella tarda EIB202]
gi|267984351|gb|ACY84180.1| flagellar motor protein [Edwardsiella tarda EIB202]
gi|304558696|gb|ADM41360.1| Flagellar motor rotation protein MotB [Edwardsiella tarda FL6-60]
Length = 332
Score = 35.2 bits (79), Expect = 3.2, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 39/124 (31%), Gaps = 14/124 (11%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F S + P +L + L + + GH D+L S+
Sbjct: 152 QIIDSQNRPMFQNGSAQVEPYMRNILRAIAPILNELPNKISLSGHTDDLPYANGERGYSN 211
Query: 99 IALGLRRAYAVFNYFVARGISASRM-KVTSYGKE---MPSVYGHDEDAYAKNRRAIVFLK 154
L RA A +A G++ +++ +V A NRR + +
Sbjct: 212 WELSADRANASRRELIAGGLAGNKILRVVGMADTMNLRNLAGNA-----AVNRRISILVL 266
Query: 155 GCRA 158
A
Sbjct: 267 NKAA 270
>gi|126417355|gb|ABO13880.1| MotB [Ralstonia solanacearum]
Length = 314
Score = 35.2 bits (79), Expect = 3.2, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 40/119 (33%), Gaps = 7/119 (5%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSI 99
+ F +S ++P +L LG+ L + GH D S+
Sbjct: 156 QIVDQQNRPMFANASAEVQPYLRTILRELGAALNDVPNPISLSGHTDATQYATQNGYSNW 215
Query: 100 ALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A +A G+ ++ +V +P + NRR + + R
Sbjct: 216 ELSADRANASRRELIAGGMKPEKVARVVGLEASVPLD--KTDAFNPINRRISIVVLNNR 272
>gi|192359644|ref|YP_001981667.1| chemotaxis protein MotB [Cellvibrio japonicus Ueda107]
gi|190685809|gb|ACE83487.1| chemotaxis protein MotB [Cellvibrio japonicus Ueda107]
Length = 333
Score = 35.2 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 38/109 (34%), Gaps = 7/109 (6%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSIALGLRR 105
FD S +++ +VL L L+K I GH D ++ L R
Sbjct: 171 QRPMFDVGSANLKTYSKEVLQALAPILDKVPNKISITGHTDATPYGANATYTNWELSADR 230
Query: 106 AYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
A A + +++ V G P + D+ NRR + +
Sbjct: 231 ANAARRAMLEGSYPENKVATVQGMGSVAPLLV--DKPLEPINRRIAIIV 277
>gi|157147077|ref|YP_001454396.1| hypothetical protein CKO_02854 [Citrobacter koseri ATCC BAA-895]
gi|157084282|gb|ABV13960.1| hypothetical protein CKO_02854 [Citrobacter koseri ATCC BAA-895]
Length = 315
Score = 35.2 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 44/135 (32%), Gaps = 8/135 (5%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD 82
T L + + V D F SS + P ++L+ L K D
Sbjct: 150 TSTYDAQANLKMEIVPQGLRILVSDDQKREMFQRSSAILTPFFKRLLTEFAPELNKIDNK 209
Query: 83 FLIEGHADELGSR----NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+I GH D R ++ L RA G+ S++ S + +
Sbjct: 210 IIITGHTDATRFRDQVLYNNWNLSGERAMQARAVLTTGGLDQSKILQVSGMADQMLLDPQ 269
Query: 139 DEDAYAKNRRAIVFL 153
+ + NRR + +
Sbjct: 270 HPLS-SANRRIEIMV 283
>gi|207723077|ref|YP_002253485.1| chemotaxis motility protein b [Ralstonia solanacearum MolK2]
gi|206588269|emb|CAQ18823.1| probable chemotaxis motility protein b [Ralstonia solanacearum
MolK2]
Length = 171
Score = 35.2 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 24/119 (20%), Positives = 39/119 (32%), Gaps = 7/119 (5%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR----NSSI 99
+ F +S + P +L LGS L + GH D S+
Sbjct: 13 QIVDQQNRPMFANASAEVEPYMRTILRELGSALNDVPNPISLSGHTDATQYATQNGYSNW 72
Query: 100 ALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A +A G+ ++ +V +P + NRR + + R
Sbjct: 73 ELSADRANASRRELIAGGMKPEKVARVVGLEASVPLD--KTDAFNPINRRISIVVLNNR 129
>gi|254303362|ref|ZP_04970720.1| hypothetical protein FNP_1008 [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148323554|gb|EDK88804.1| hypothetical protein FNP_1008 [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 418
Score = 35.2 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 12/94 (12%), Positives = 25/94 (26%), Gaps = 3/94 (3%)
Query: 1 MQYSTIFIILSAITMMSIS-GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSY 59
M+ I L A+ M+ ++ + + ++ + + +G + S
Sbjct: 1 MKMKKILFSLLAVFMLVVAVACGKKEAPTEDANAQQQGATTEATQNYHIGIVTTSVSQSE 60
Query: 60 SIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG 93
V G E I D
Sbjct: 61 DNFRGAEAVAKKYGLSNEG--GKITIVTVPDNFM 92
>gi|54307286|ref|YP_128306.1| chemotaxis LafU protein [Photobacterium profundum SS9]
gi|46911706|emb|CAG18504.1| Hypothetical chemotaxis LafU protein [Photobacterium profundum SS9]
Length = 330
Score = 35.2 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 52/157 (33%), Gaps = 9/157 (5%)
Query: 10 LSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDS---VFFDTSSYSIRPADI 66
LS + ++ + S + + + + D F + P
Sbjct: 136 LSTAQLTILAKGLKEMAEALSASNNIVLEIVPQGLRILIQDDDDHFMFQRGGIEMTPFFE 195
Query: 67 QVLSNLGSWLEKHDCDFLIEGHADELGSR---NSSIALGLRRAYAVFNYFVARG-ISASR 122
+L NL L + +I GH D + S+ L RA V G A+
Sbjct: 196 DMLYNLAPVLGQIKNRMVISGHTDSIPFHRRDYSNWDLSGSRALKARQVLVDSGLPVANI 255
Query: 123 MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRAN 159
++V + MP + + KNRR + + A+
Sbjct: 256 LQVAAMAARMPVNKQYPKSG--KNRRIEMMVLTKNAD 290
>gi|312881649|ref|ZP_07741427.1| hypothetical protein VIBC2010_10367 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309370712|gb|EFP98186.1| hypothetical protein VIBC2010_10367 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 331
Score = 35.2 bits (79), Expect = 3.4, Method: Composition-based stats.
Identities = 21/117 (17%), Positives = 41/117 (35%), Gaps = 9/117 (7%)
Query: 42 EQFSSSVGDSVFFDTSSYSIRPADI-QVLSNLGSWLEKHDCDFLIEGHADELGSR-NSSI 99
EQ +S + + P Q+L + D + G AD + +
Sbjct: 216 EQQVDLAENSGIYRYDVAELEPTMKSQLLQLVNRIERLETYDIRVTGGADSKPMYLSHNT 275
Query: 100 ALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGC 156
L RRA AV ++ + GI +++ + +E+ R+ + + G
Sbjct: 276 DLAQRRAIAVADFLIQHGIQKDYIQIE-------VMVTENEEDDPSARKVEITVHGT 325
>gi|288870266|ref|ZP_06113528.2| bordetella uptake protein product [Clostridium hathewayi DSM 13479]
gi|288867819|gb|EFD00118.1| bordetella uptake protein product [Clostridium hathewayi DSM 13479]
Length = 368
Score = 35.2 bits (79), Expect = 3.4, Method: Composition-based stats.
Identities = 18/132 (13%), Positives = 39/132 (29%), Gaps = 5/132 (3%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFS-----SSVGDSVFFD 55
M+ + ++ A M ++ G + + P+T +S + ++ GDS
Sbjct: 11 MKRRKLMALVLAGAMAAVVGCSSQSGTVKQPETQKEAASQESTKENGNEGNTAGDSTAAQ 70
Query: 56 TSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVA 115
S+ + N L +G G+ L N +A
Sbjct: 71 AGSWKPDHDITIRVPNAAGGTMDTITRILGQGIQQSTGTTVMINNLTGASGAIAANDLLA 130
Query: 116 RGISASRMKVTS 127
+ + +
Sbjct: 131 KDADPCELMTSG 142
>gi|108813332|ref|YP_649099.1| PAL/OmpA-family membrane protein [Yersinia pestis Nepal516]
gi|108776980|gb|ABG19499.1| PAL/OmpA-family membrane protein [Yersinia pestis Nepal516]
Length = 553
Score = 35.2 bits (79), Expect = 3.4, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
Query: 53 FFDTSSYSIRPADIQVLSN-LGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
FD +++ ++L L K ++ GH D G ++ L L+RA A+ +
Sbjct: 447 LFDVGKFTLNAGSTKMLVTALIDIKAKPGWLIVVAGHTDITGDAQANHILSLKRAEALRD 506
Query: 112 Y-FVARGISASRMKVTSYGKEMPS 134
+ +S + V YG P
Sbjct: 507 WMLSTSDVSPTCFAVQGYGATRPI 530
>gi|302874031|ref|YP_003842664.1| hypothetical protein Clocel_1144 [Clostridium cellulovorans 743B]
gi|307689716|ref|ZP_07632162.1| hypothetical protein Ccel74_16274 [Clostridium cellulovorans
743B]
gi|302576888|gb|ADL50900.1| hypothetical protein Clocel_1144 [Clostridium cellulovorans 743B]
Length = 680
Score = 35.2 bits (79), Expect = 3.4, Method: Composition-based stats.
Identities = 11/65 (16%), Positives = 21/65 (32%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M I I+++ +S + +S V S+ E + V S+ +
Sbjct: 1 MNKKIITILMALSLCISATACTKQSANTTSNTQVEATSATSEASKAPVISSINISSGESE 60
Query: 61 IRPAD 65
A
Sbjct: 61 TVGAA 65
>gi|152980289|ref|YP_001353788.1| flagellar motor protein MotB [Janthinobacterium sp. Marseille]
gi|151280366|gb|ABR88776.1| MotB chemotaxis protein [Janthinobacterium sp. Marseille]
Length = 328
Score = 35.2 bits (79), Expect = 3.5, Method: Composition-based stats.
Identities = 20/127 (15%), Positives = 39/127 (30%), Gaps = 20/127 (15%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F + ++P +L + L + GH D S+
Sbjct: 162 QIVDEKNRPMFALARAELQPYTKVILHEIAKILNDIPNRISLSGHTDATPYSSGEKSYSN 221
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTS------YGKEMPSVYGHDEDAYAKNRRAIV 151
L RA A +A G++ ++ ++V + P NRR +
Sbjct: 222 WELSSDRANASRRELIAGGMAENKVLRVVGLSSAVLFDSSDPLNP--------VNRRISI 273
Query: 152 FLKGCRA 158
+ +A
Sbjct: 274 IVLNKKA 280
>gi|254227706|ref|ZP_04921137.1| OmpA family protein [Vibrio sp. Ex25]
gi|262395752|ref|YP_003287605.1| hypothetical protein VEA_000452 [Vibrio sp. Ex25]
gi|151939748|gb|EDN58575.1| OmpA family protein [Vibrio sp. Ex25]
gi|262339346|gb|ACY53140.1| hypothetical protein VEA_000452 [Vibrio sp. Ex25]
Length = 1591
Score = 35.2 bits (79), Expect = 3.5, Method: Composition-based stats.
Identities = 26/154 (16%), Positives = 54/154 (35%), Gaps = 20/154 (12%)
Query: 18 ISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLE 77
+D+ I+ D +++ ++ + F + + ++ +++ +
Sbjct: 614 AQALDDAKNVINGSDGEEIAHIVEDSQGLAI--HINFKFNEWQHGNEHGKLRTDIKQVCK 671
Query: 78 K--------HDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS-ASRMKVTSY 128
IEGHA +GS +++ + +RA V N ++ S R+ SY
Sbjct: 672 YLSQLMLDNPSYKVSIEGHAGRIGSSDANALVAAKRAKTVTNAIISIDPSLEERVYTASY 731
Query: 129 GKEMPSVYGHDEDAY---------AKNRRAIVFL 153
G P + A +RR V L
Sbjct: 732 GNTQPLTADSTKSDMSQTGDSAPAALDRRVEVRL 765
>gi|241668474|ref|ZP_04756052.1| peptidyl-prolyl cis-trans isomerase family protein [Francisella
philomiragia subsp. philomiragia ATCC 25015]
gi|254877008|ref|ZP_05249718.1| peptidyl-prolyl cis-trans isomerase [Francisella philomiragia
subsp. philomiragia ATCC 25015]
gi|254843029|gb|EET21443.1| peptidyl-prolyl cis-trans isomerase [Francisella philomiragia
subsp. philomiragia ATCC 25015]
Length = 269
Score = 34.8 bits (78), Expect = 3.5, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 33/110 (30%), Gaps = 3/110 (2%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ I I+S + G + + ++ Q + + + + + +
Sbjct: 1 MKLKKIVAIMSCTVLGVAIGSCSTKETTNETKPQATSTNTQNVVAQTQPNDITKSSLKMN 60
Query: 61 IRPAD---IQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAY 107
+ QV S + I G AD + S I+ R
Sbjct: 61 ADASYVVGYQVGSGIARQDFGLYDKQTIAGFADAINSDKPRISESQIRRN 110
>gi|319900567|ref|YP_004160295.1| hypothetical protein Bache_0686 [Bacteroides helcogenes P 36-108]
gi|319415598|gb|ADV42709.1| hypothetical protein Bache_0686 [Bacteroides helcogenes P 36-108]
Length = 364
Score = 34.8 bits (78), Expect = 3.6, Method: Composition-based stats.
Identities = 17/130 (13%), Positives = 42/130 (32%), Gaps = 4/130 (3%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD-SVFFDTSSY 59
M+ F +++ + ++ G + ++P+ +F++SV D S
Sbjct: 1 MRTMKHFSVMALLATAALCGCT---DEATTPENPNFPQDGVMRFATSVNDVQTRSGYDSD 57
Query: 60 SIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
+I D+ + + I H G + L +Y +
Sbjct: 58 NITTRDLSLWVTPTVSPKADYTRKSIILHHTTDGGWGTYSYLSDVGSYTPTTLLWQDKTT 117
Query: 120 ASRMKVTSYG 129
+ +++G
Sbjct: 118 PVEVVASNFG 127
>gi|300113444|ref|YP_003760019.1| hypothetical protein Nwat_0743 [Nitrosococcus watsonii C-113]
gi|299539381|gb|ADJ27698.1| conserved hypothetical protein [Nitrosococcus watsonii C-113]
Length = 237
Score = 34.8 bits (78), Expect = 3.6, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 38/124 (30%), Gaps = 22/124 (17%)
Query: 52 VFFDTSSYSIRPADIQVLSN-------LGSWLEKHDCDFLIEGHADEL--------GSRN 96
V F T S IR ++LS+ + + + IEGH + +
Sbjct: 98 VLFATGSTEIRQRFKEILSDFFPRYLVILKHYKDSIDEIRIEGHTSSIWNNRVSETKAYF 157
Query: 97 SSIALGLRRAYAVFNYFVA-------RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
++ L R +V +Y R + + + A++RR
Sbjct: 158 LNMLLSQGRTRSVLHYVYELPAVERDRDWVKRHFAAVGFSSSRLVLDAQGNEDRARSRRV 217
Query: 150 IVFL 153
+
Sbjct: 218 SFRV 221
>gi|318605218|emb|CBY26716.1| flagellar motor rotation protein MotB [Yersinia enterocolitica
subsp. palearctica Y11]
Length = 409
Score = 34.8 bits (78), Expect = 3.6, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 38/120 (31%), Gaps = 8/120 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS-----RNSS 98
+ F S + P +L + L + GH D+L S+
Sbjct: 150 QIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPNKISLSGHTDDLPYASGERGYSN 209
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A +A G+ + ++V M +D NRR + + +
Sbjct: 210 WELSADRANASRRELLAGGLDEGKVLRVVGMASTMRLKEQASDD--PVNRRISILVLNKQ 267
>gi|292491142|ref|YP_003526581.1| hypothetical protein Nhal_1021 [Nitrosococcus halophilus Nc4]
gi|291579737|gb|ADE14194.1| conserved hypothetical protein [Nitrosococcus halophilus Nc4]
Length = 237
Score = 34.8 bits (78), Expect = 3.6, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 38/124 (30%), Gaps = 22/124 (17%)
Query: 52 VFFDTSSYSIRPADIQVLSN-------LGSWLEKHDCDFLIEGHADE--------LGSRN 96
V F T S IR ++L++ + + + IEGH +
Sbjct: 98 VLFATGSTEIRQRFKEILADFFPRYLVILKHYKDSIDEIRIEGHTSSVWNNQVSETEAYF 157
Query: 97 SSIALGLRRAYAVFNYFVA-------RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
++ L R +V +Y RG + + + A++RR
Sbjct: 158 LNMLLSQGRTRSVLHYVYELPKVESDRGWVKRHFAAVGFSSSRLVLDDQGNEDRARSRRV 217
Query: 150 IVFL 153
+
Sbjct: 218 SFRV 221
>gi|300722595|ref|YP_003711885.1| flagella protein [Xenorhabdus nematophila ATCC 19061]
gi|297629102|emb|CBJ89687.1| enables flagellar motor rotation, linking torque machinery to cell
wall [Xenorhabdus nematophila ATCC 19061]
Length = 333
Score = 34.8 bits (78), Expect = 3.6, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 37/115 (32%), Gaps = 7/115 (6%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSSIALGLR 104
+ F S + +L + L + GH D L S+ L
Sbjct: 155 NRPMFMIGSAKVESYMSDILQAIAPILNDIPNKISLSGHTDSLKYANGQRGYSNWELSSD 214
Query: 105 RAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
RA A + G+ ++ +V + G D +A NRR + + A
Sbjct: 215 RANASRRELLVGGLDEVKILRVVGMASTVSMQKGIDPNA-PVNRRISIIVLNKEA 268
>gi|289551407|ref|YP_003472311.1| Uncharacterized iron compound ABC uptake transporter,
substrate-binding protein [Staphylococcus lugdunensis
HKU09-01]
gi|315658915|ref|ZP_07911782.1| iron (Fe+3) ABC superfamily ATP binding cassette transporter,
binding protein [Staphylococcus lugdunensis M23590]
gi|289180938|gb|ADC88183.1| Uncharacterized iron compound ABC uptake transporter,
substrate-binding protein [Staphylococcus lugdunensis
HKU09-01]
gi|315496039|gb|EFU84367.1| iron (Fe+3) ABC superfamily ATP binding cassette transporter,
binding protein [Staphylococcus lugdunensis M23590]
Length = 344
Score = 34.8 bits (78), Expect = 3.6, Method: Composition-based stats.
Identities = 8/51 (15%), Positives = 22/51 (43%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDS 51
M+ + +F+ILS + +++ G + D++ S ++ +
Sbjct: 1 MKKTVLFLILSLVLVLAACGNQSKDSETKSGESKGTVKINNNFEAQGDKRD 51
>gi|163856411|ref|YP_001630709.1| flagellar motor protein MotB [Bordetella petrii DSM 12804]
gi|163260139|emb|CAP42440.1| flagellar motor component MotB [Bordetella petrii]
Length = 312
Score = 34.8 bits (78), Expect = 3.6, Method: Composition-based stats.
Identities = 31/127 (24%), Positives = 43/127 (33%), Gaps = 11/127 (8%)
Query: 40 LQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRN 96
E + D F T S ++P +L LG L + I GH D
Sbjct: 150 TTEGLRIQIVDNQKRPMFATGSAEVQPYMRDILRELGPVLNELPNKISIAGHTDATQYAR 209
Query: 97 SSIALGLR-----RAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAI 150
A RA A VA G++ + M++ M V D A A NRR
Sbjct: 210 GERAYSNWELSADRANASRQELVAGGMAEGKLMRIQGLSSSMSLVK-DDPYA-AVNRRIS 267
Query: 151 VFLKGCR 157
+ + R
Sbjct: 268 LVVLNRR 274
>gi|321312806|ref|YP_004205093.1| putative fructose amino acid-binding lipoprotein [Bacillus
subtilis BSn5]
gi|320019080|gb|ADV94066.1| putative fructose amino acid-binding lipoprotein [Bacillus
subtilis BSn5]
Length = 422
Score = 34.8 bits (78), Expect = 3.7, Method: Composition-based stats.
Identities = 7/30 (23%), Positives = 19/30 (63%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISS 30
M+ +F+I++A++M++I+G + +
Sbjct: 1 MKKMLLFLIIAAVSMLTIAGCSSQSSSADG 30
>gi|157371226|ref|YP_001479215.1| OmpA/MotB domain-containing protein [Serratia proteamaculans 568]
gi|157322990|gb|ABV42087.1| OmpA/MotB domain protein [Serratia proteamaculans 568]
Length = 321
Score = 34.8 bits (78), Expect = 3.7, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 38/120 (31%), Gaps = 8/120 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + +L + L + GH D++ S+
Sbjct: 148 QIIDSQNRPMFKTGSAQVESYMRDILRAIAPILNDLPNKISLSGHTDDIPYATGERGYSN 207
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A +A G+S + ++V M A NRR V + +
Sbjct: 208 WELSADRANASRRELIAGGLSEGKVLRVVGMAATMSLK--QHGADDAINRRITVLVLNKQ 265
>gi|308448969|ref|XP_003087813.1| hypothetical protein CRE_11630 [Caenorhabditis remanei]
gi|308252596|gb|EFO96548.1| hypothetical protein CRE_11630 [Caenorhabditis remanei]
Length = 264
Score = 34.8 bits (78), Expect = 3.8, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 46/138 (33%), Gaps = 26/138 (18%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTS-SYSIRPADIQVLSNLGSWLEKH--DCDFLIEGHA 89
+ + ++ SV F S + +V+S + +++ + + G+
Sbjct: 134 NNQSATEQTALSATGQSASVLFYFDHSDKNGVKNPEVISKIADQIKQTDGNSKIFVAGYT 193
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDE--------- 140
D LGS + L RA V + +GI A +++ + +
Sbjct: 194 DRLGSFPYNQRLSAARANTVVDLLKQQGIPADQIQFS--------AENKTDVYQKCNGMN 245
Query: 141 ------DAYAKNRRAIVF 152
+ A NRR +
Sbjct: 246 KKIQLVECLAPNRRVNIT 263
>gi|317051627|ref|YP_004112743.1| OmpA/MotB domain-containing protein [Desulfurispirillum indicum S5]
gi|316946711|gb|ADU66187.1| OmpA/MotB domain protein [Desulfurispirillum indicum S5]
Length = 193
Score = 34.8 bits (78), Expect = 3.8, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 29/76 (38%), Gaps = 7/76 (9%)
Query: 82 DFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDED 141
+ GH+D G + + RRA +V Y G+S + T
Sbjct: 125 SVAVTGHSDHFGPAWAKERVANRRAESVAAYLTTLGVSVA--SATGQSDHNQISTNP--- 179
Query: 142 AYAKNRRAIVFLKGCR 157
A+NRRA + L C+
Sbjct: 180 --AQNRRAEITLTECK 193
>gi|71906362|ref|YP_283949.1| flagellar motor protein MotB [Dechloromonas aromatica RCB]
gi|71845983|gb|AAZ45479.1| OmpA/MotB [Dechloromonas aromatica RCB]
Length = 316
Score = 34.8 bits (78), Expect = 3.9, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 37/120 (30%), Gaps = 8/120 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ FD+SS ++P +L +G L + GH D S+
Sbjct: 162 QIVDEQNRPMFDSSSADLKPYTRDILRQIGKALNGVSNRISLAGHTDAAQFAGGEKGFSN 221
Query: 99 IALGLRRAYAVFNYFV-ARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A V + ++V + + NRR + + +
Sbjct: 222 WELSANRANASRRELVVGGMDDSKVLRVVGLASTVLFDKND-PLN-SVNRRISIVVLNQK 279
>gi|149181426|ref|ZP_01859922.1| YcdH [Bacillus sp. SG-1]
gi|148850827|gb|EDL64981.1| YcdH [Bacillus sp. SG-1]
Length = 366
Score = 34.8 bits (78), Expect = 4.0, Method: Composition-based stats.
Identities = 5/32 (15%), Positives = 14/32 (43%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPD 32
M+ + I ++ + +++ G D K +
Sbjct: 1 MKKIKLLISIAFLLLLAACGTDTEQEKSIDSN 32
>gi|332161302|ref|YP_004297879.1| flagellar motor protein MotB [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325665532|gb|ADZ42176.1| flagellar motor protein MotB [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 409
Score = 34.8 bits (78), Expect = 4.1, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 38/120 (31%), Gaps = 8/120 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F S + P +L + L + GH D+L S+
Sbjct: 150 QIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPNKISLSGHTDDLPYASGERGYSN 209
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A +A G+ + ++V M +D NRR + + +
Sbjct: 210 WELSADRANASRRELLAGGLDEGKVLRVVGMASTMRLKEQASDD--PVNRRISILVLNKQ 267
>gi|302340616|ref|YP_003805822.1| hypothetical protein Spirs_4148 [Spirochaeta smaragdinae DSM 11293]
gi|301637801|gb|ADK83228.1| Outer membrane protein and related peptidoglycan-associated
(lipo)protein [Spirochaeta smaragdinae DSM 11293]
Length = 832
Score = 34.8 bits (78), Expect = 4.1, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 99 IALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVF 152
L RRA V N V +G+S +++ ++G P+ D + K RR
Sbjct: 767 QPLTERRAATVKNALVDQGMSEEKIETQAFGGRFPNADVTDRSLWWKVRRVEFV 820
>gi|162420339|ref|YP_001607210.1| flagellar motor protein MotB [Yersinia pestis Angola]
gi|162353154|gb|ABX87102.1| chemotaxis MotB protein [Yersinia pestis Angola]
Length = 421
Score = 34.8 bits (78), Expect = 4.1, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 39/121 (32%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F S + P +L + L + GH D+L S+
Sbjct: 150 QIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPNKLSLSGHTDDLPYARGERGYSN 209
Query: 99 IALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A +A G+ ++ +V M +D NRR + + +
Sbjct: 210 WELSADRANASRRELLAGGLDEGKILRVVGMASTMRLKEQASDD--PVNRRISILVLNKQ 267
Query: 158 A 158
+
Sbjct: 268 S 268
>gi|291546378|emb|CBL19486.1| trigger factor [Ruminococcus sp. SR1/5]
Length = 451
Score = 34.8 bits (78), Expect = 4.1, Method: Composition-based stats.
Identities = 5/50 (10%), Positives = 15/50 (30%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD 50
M+ ++L+ ++I+ + ++ S D
Sbjct: 1 MKKKAYLMVLALCAALAITACGTSTDQKDDKKPAAEAQDTTDKEDSGSAD 50
>gi|254787370|ref|YP_003074799.1| phosphate binding family protein [Teredinibacter turnerae T7901]
gi|237685918|gb|ACR13182.1| phosphate binding family protein [Teredinibacter turnerae T7901]
Length = 464
Score = 34.8 bits (78), Expect = 4.1, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 46/124 (37%), Gaps = 6/124 (4%)
Query: 33 TVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEK---HDCDFLIEGHA 89
NE + ++ + + F ++ + +S L +++ + G +
Sbjct: 326 NGPNEYQALKDYAERLSVNFRFQPGKANLDNKALHDISRLVDYVKSLPGEPLHVQLVGFS 385
Query: 90 DELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRA 149
+ S N + L RA V G++ + + +G ++ + + AKN R
Sbjct: 386 NPEDSDNRADVLSKLRASKVKIELFRNGLTTAPIM--GFGSDVLVA-NDNGNTSAKNERV 442
Query: 150 IVFL 153
V+L
Sbjct: 443 EVWL 446
>gi|172037485|ref|YP_001803986.1| photosystem II manganese-stabilizing polypeptide, 33 kD extrinsic
protein [Cyanothece sp. ATCC 51142]
gi|6478777|gb|AAF13997.1| photosystem II manganese stabilizing protein [Cyanothece sp. ATCC
51142]
gi|171698939|gb|ACB51920.1| photosystem II manganese-stabilizing polypeptide, 33 kD extrinsic
protein [Cyanothece sp. ATCC 51142]
Length = 277
Score = 34.8 bits (78), Expect = 4.1, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 28/82 (34%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M++ T+ I A+ + I+ +P + + L ++ F S
Sbjct: 3 MRFRTLLIAFLALCLGLITACSEGPANAVNPQDLTYDEILNTGLANKCPQISEFTRGSIP 62
Query: 61 IRPADIQVLSNLGSWLEKHDCD 82
I P + +L +++
Sbjct: 63 IEPGQTYFVDDLCLEPQEYFVK 84
>gi|11134132|sp|Q9R6W6|PSBO_CYAA5 RecName: Full=Photosystem II manganese-stabilizing polypeptide;
Short=MSP; Flags: Precursor
Length = 275
Score = 34.8 bits (78), Expect = 4.1, Method: Composition-based stats.
Identities = 12/82 (14%), Positives = 28/82 (34%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M++ T+ I A+ + I+ +P + + L ++ F S
Sbjct: 1 MRFRTLLIAFLALCLGLITACSEGPANAVNPQDLTYDEILNTGLANKCPQISEFTRGSIP 60
Query: 61 IRPADIQVLSNLGSWLEKHDCD 82
I P + +L +++
Sbjct: 61 IEPGQTYFVDDLCLEPQEYFVK 82
>gi|270262419|ref|ZP_06190690.1| hypothetical protein SOD_c00360 [Serratia odorifera 4Rx13]
gi|270043103|gb|EFA16196.1| hypothetical protein SOD_c00360 [Serratia odorifera 4Rx13]
Length = 321
Score = 34.8 bits (78), Expect = 4.2, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 38/120 (31%), Gaps = 8/120 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F T S + +L + L + GH D++ S+
Sbjct: 148 QIIDSQNRPMFKTGSAQVESYMRDILRAIAPILNDLPNKISLSGHTDDIPYATGERGYSN 207
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A +A G+S + ++V M A NRR V + +
Sbjct: 208 WELSADRANASRRELIAGGLSEGKVLRVVGMAATMSLK--QHGADDAINRRITVLVLNKQ 265
>gi|238784596|ref|ZP_04628602.1| Lateral flagellar proton motor protein B [Yersinia bercovieri ATCC
43970]
gi|238714465|gb|EEQ06471.1| Lateral flagellar proton motor protein B [Yersinia bercovieri ATCC
43970]
Length = 256
Score = 34.8 bits (78), Expect = 4.2, Method: Composition-based stats.
Identities = 28/141 (19%), Positives = 49/141 (34%), Gaps = 8/141 (5%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD 82
T + L + + + D F SS + P ++L+ L + D
Sbjct: 93 TSTYDAQSNLKMEVVPQGLRILIQDDKQRDMFQRSSALLTPFFSRLLAELAPAFNEMDNK 152
Query: 83 FLIEGHADELGSR----NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+I GH D R ++ L RA V G+S R+ + + +
Sbjct: 153 IIITGHTDASRYRDQVRYNNWNLSGERALMAHKALVKGGLSEERVLQINAMADQMLLTPT 212
Query: 139 DEDAYAKNRRAIVFLKGCRAN 159
+ A A NRR + + A+
Sbjct: 213 EPLA-ASNRRIEIMVLTKTAS 232
>gi|260909453|ref|ZP_05916158.1| conserved hypothetical protein [Prevotella sp. oral taxon 472
str. F0295]
gi|260636420|gb|EEX54405.1| conserved hypothetical protein [Prevotella sp. oral taxon 472
str. F0295]
Length = 559
Score = 34.8 bits (78), Expect = 4.2, Method: Composition-based stats.
Identities = 11/67 (16%), Positives = 25/67 (37%), Gaps = 1/67 (1%)
Query: 1 MQYSTIFIILSAITMMSISGI-DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSY 59
M+ + I++ + A +S + DN++ I + D S + + DS+
Sbjct: 1 MKRNKIYLAVFAALSLSATACNDNVEHNIQAVDAPAFVSVSPQDNIKAGLDSIIVTYDKN 60
Query: 60 SIRPADI 66
+
Sbjct: 61 IFFASSQ 67
>gi|254780529|ref|YP_003064942.1| flagellar motor protein MotB [Candidatus Liberibacter asiaticus
str. psy62]
gi|254040206|gb|ACT57002.1| flagellar motor protein MotB [Candidatus Liberibacter asiaticus
str. psy62]
Length = 343
Score = 34.8 bits (78), Expect = 4.2, Method: Composition-based stats.
Identities = 34/163 (20%), Positives = 53/163 (32%), Gaps = 10/163 (6%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS--S 58
M+ L+ IS + + VL E++ S + S
Sbjct: 186 MKRKKRLQDLA----KKISSTLSGLVADNIVKGVLFETTRTGILISIIDQRNTPMFDKSS 241
Query: 59 YSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRN---SSIALGLRRAYAVFNYFVA 115
P I VL +G L I GH D RN + L L RAY+ + +
Sbjct: 242 SIPLPETIVVLQKIGEVLAHSTEVISIRGHTDASPFRNIARDNWRLSLDRAYSAYQVLMK 301
Query: 116 RGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
G+S R+ S D + NRR + ++ +
Sbjct: 302 SGVSEDRISKISGFAHHRLKIASDPMN-SANRRIDILVEDRQG 343
>gi|190572619|ref|YP_001970464.1| flagellar motor protein MotB [Stenotrophomonas maltophilia K279a]
gi|190010541|emb|CAQ44150.1| putative chemotaxis protein [Stenotrophomonas maltophilia K279a]
Length = 312
Score = 34.8 bits (78), Expect = 4.2, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 38/116 (32%), Gaps = 7/116 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD----ELGSRNSSI 99
+ FD S +++P Q+L L +L + GH D +
Sbjct: 164 QIVDKQNRPMFDLGSATLKPYTQQILHELAEYLNHVPNRISLTGHTDITAYSAARGYGNW 223
Query: 100 ALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L RA A V G+ S++ V ++ + NRR + +
Sbjct: 224 ELSADRANAARRALVDGGLEDSKITRVVGLSSS--VLFDKTDPQNPINRRISIVVM 277
>gi|303254837|ref|ZP_07340930.1| SmpA/OmlA domain-containing protein [Streptococcus pneumoniae
BS455]
gi|302598200|gb|EFL65253.1| SmpA/OmlA domain-containing protein [Streptococcus pneumoniae
BS455]
Length = 123
Score = 34.8 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 31/90 (34%), Gaps = 1/90 (1%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPD-TVLNESSLQEQFSSSVGDSVFFDTSSY 59
M+ S I + AI ++ G + T +P+ +N + + + + F S
Sbjct: 1 MKLSRILLSSIAIATVAACGNLSKVTDAGTPEYKDVNGQQIPQLVWPKIDSATFNHDGSQ 60
Query: 60 SIRPADIQVLSNLGSWLEKHDCDFLIEGHA 89
+ + + + + K LI
Sbjct: 61 FGTWPNWDNVRMIENGMNKDQIRQLIGDPH 90
>gi|123442804|ref|YP_001006781.1| flagellar motor protein MotB [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122089765|emb|CAL12618.1| chemotaxis MotB protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 414
Score = 34.8 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 38/120 (31%), Gaps = 8/120 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F S + P +L + L + GH D+L S+
Sbjct: 150 QIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPNKISLSGHTDDLPYASGERGYSN 209
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A +A G+ + ++V M +D NRR + + +
Sbjct: 210 WELSADRANASRRELLAGGLDEGKVLRVVGMASTMRLKEQASDD--PVNRRISILVLNKQ 267
>gi|254564195|ref|YP_003071290.1| chemotaxis protein MotB [Methylobacterium extorquens DM4]
gi|254271473|emb|CAX27488.1| putative chemotaxis protein MotB [Methylobacterium extorquens DM4]
Length = 277
Score = 34.8 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 39/136 (28%), Gaps = 10/136 (7%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD 82
+++ + + ++ S+ D F S ++L L L K
Sbjct: 130 PEVAELSKNVIIAPNRKGLDVSIVDQDGRSMFPEGSSRPNDRTRRLLERLTPTLMKLPNR 189
Query: 83 FLIEGHADELG----SRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYG 137
+ G L RA +V + G+ R VT P
Sbjct: 190 IAVTGFTATTRPGTRDTAPPWELSANRALSVRDVLAGAGLPDDRFASVTGKADTEPMFP- 248
Query: 138 HDEDAYAKNRRAIVFL 153
+ A NRR V L
Sbjct: 249 DNPY-LAANRRVTVTL 263
>gi|167466606|ref|ZP_02331310.1| flagellar motor protein MotB [Yersinia pestis FV-1]
Length = 427
Score = 34.8 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 39/121 (32%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F S + P +L + L + GH D+L S+
Sbjct: 150 QIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPNKLSLSGHTDDLPYARGERGYSN 209
Query: 99 IALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A +A G+ ++ +V M +D NRR + + +
Sbjct: 210 WELSADRANASRRELLAGGLDEGKILRVVGMASTMRLKEQASDD--PVNRRISILVLNKQ 267
Query: 158 A 158
+
Sbjct: 268 S 268
>gi|315302575|ref|ZP_07873394.1| lipoprotein, putative [Listeria ivanovii FSL F6-596]
gi|313629053|gb|EFR97367.1| lipoprotein, putative [Listeria ivanovii FSL F6-596]
Length = 283
Score = 34.8 bits (78), Expect = 4.4, Method: Composition-based stats.
Identities = 6/51 (11%), Positives = 24/51 (47%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDS 51
M+ ++ ++ + +++ G D+ + K + +T + + ++ + D
Sbjct: 1 MKKISVIFLVLGVCLLTACGTDDNEKKANQKETEVAKKETNDKSNKKAADQ 51
>gi|254422497|ref|ZP_05036215.1| Putative phospholipid-binding domain family [Synechococcus sp.
PCC 7335]
gi|196189986|gb|EDX84950.1| Putative phospholipid-binding domain family [Synechococcus sp.
PCC 7335]
Length = 149
Score = 34.8 bits (78), Expect = 4.4, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDS 51
M+ TI +L+ + M+ ++ D T +P V E +V D+
Sbjct: 1 MK-KTITTVLAGVLMLGVAACDTARTSADAPSDVGGEVETPAAVEETVEDA 50
>gi|22125717|ref|NP_669140.1| flagellar motor protein MotB [Yersinia pestis KIM 10]
gi|108807851|ref|YP_651767.1| flagellar motor protein MotB [Yersinia pestis Antiqua]
gi|108812127|ref|YP_647894.1| flagellar motor protein MotB [Yersinia pestis Nepal516]
gi|149366375|ref|ZP_01888409.1| chemotaxis MotB protein [Yersinia pestis CA88-4125]
gi|165925475|ref|ZP_02221307.1| chemotaxis MotB protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165938485|ref|ZP_02227042.1| chemotaxis MotB protein [Yersinia pestis biovar Orientalis str.
IP275]
gi|166008640|ref|ZP_02229538.1| chemotaxis MotB protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166210582|ref|ZP_02236617.1| chemotaxis MotB protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167401678|ref|ZP_02307169.1| chemotaxis MotB protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167422628|ref|ZP_02314381.1| chemotaxis MotB protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167426350|ref|ZP_02318103.1| chemotaxis MotB protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|218928797|ref|YP_002346672.1| flagellar motor protein MotB [Yersinia pestis CO92]
gi|229841656|ref|ZP_04461814.1| chemotaxis MotB protein [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229843773|ref|ZP_04463916.1| chemotaxis MotB protein [Yersinia pestis biovar Orientalis str.
India 195]
gi|229894516|ref|ZP_04509698.1| chemotaxis MotB protein [Yersinia pestis Pestoides A]
gi|229902447|ref|ZP_04517566.1| chemotaxis MotB protein [Yersinia pestis Nepal516]
gi|270490373|ref|ZP_06207447.1| flagellar motor protein MotB [Yersinia pestis KIM D27]
gi|294504144|ref|YP_003568206.1| flagellar motor protein [Yersinia pestis Z176003]
gi|21958635|gb|AAM85391.1|AE013785_4 lateral flagellar motor protein [Yersinia pestis KIM 10]
gi|108775775|gb|ABG18294.1| chemotaxis MotB protein [Yersinia pestis Nepal516]
gi|108779764|gb|ABG13822.1| chemotaxis MotB protein [Yersinia pestis Antiqua]
gi|115347408|emb|CAL20310.1| chemotaxis MotB protein [Yersinia pestis CO92]
gi|149290749|gb|EDM40824.1| chemotaxis MotB protein [Yersinia pestis CA88-4125]
gi|165913600|gb|EDR32220.1| chemotaxis MotB protein [Yersinia pestis biovar Orientalis str.
IP275]
gi|165922584|gb|EDR39735.1| chemotaxis MotB protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165993022|gb|EDR45323.1| chemotaxis MotB protein [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166207762|gb|EDR52242.1| chemotaxis MotB protein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166958475|gb|EDR55496.1| chemotaxis MotB protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167048783|gb|EDR60191.1| chemotaxis MotB protein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167054705|gb|EDR64509.1| chemotaxis MotB protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229680493|gb|EEO76590.1| chemotaxis MotB protein [Yersinia pestis Nepal516]
gi|229689381|gb|EEO81444.1| chemotaxis MotB protein [Yersinia pestis biovar Orientalis str.
India 195]
gi|229694119|gb|EEO84167.1| chemotaxis MotB protein [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229703535|gb|EEO90552.1| chemotaxis MotB protein [Yersinia pestis Pestoides A]
gi|262366194|gb|ACY62751.1| flagellar motor protein [Yersinia pestis D182038]
gi|270338877|gb|EFA49654.1| flagellar motor protein MotB [Yersinia pestis KIM D27]
gi|294354603|gb|ADE64944.1| flagellar motor protein [Yersinia pestis Z176003]
Length = 427
Score = 34.8 bits (78), Expect = 4.4, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 39/121 (32%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F S + P +L + L + GH D+L S+
Sbjct: 150 QIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPNKLSLSGHTDDLPYARGERGYSN 209
Query: 99 IALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A +A G+ ++ +V M +D NRR + + +
Sbjct: 210 WELSADRANASRRELLAGGLDEGKILRVVGMASTMRLKEQASDD--PVNRRISILVLNKQ 267
Query: 158 A 158
+
Sbjct: 268 S 268
>gi|319654387|ref|ZP_08008474.1| hypothetical protein HMPREF1013_05094 [Bacillus sp. 2_A_57_CT2]
gi|317393886|gb|EFV74637.1| hypothetical protein HMPREF1013_05094 [Bacillus sp. 2_A_57_CT2]
Length = 331
Score = 34.8 bits (78), Expect = 4.4, Method: Composition-based stats.
Identities = 10/57 (17%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Query: 1 MQYSTIFIILSAITMMSISGID-NLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDT 56
M+ ++F ++ ++ G DTK + V +S+ + FF++
Sbjct: 4 MKKLSLFAVIGLTFSLAACGQAEEKDTKDTGQSEVQTGEQENGGGETSISSNSFFES 60
>gi|218897287|ref|YP_002445698.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus G9842]
gi|228900906|ref|ZP_04065121.1| Foldase protein prsA 1 [Bacillus thuringiensis IBL 4222]
gi|218542209|gb|ACK94603.1| peptidylprolyl isomerase PrsA3 [Bacillus cereus G9842]
gi|228858832|gb|EEN03277.1| Foldase protein prsA 1 [Bacillus thuringiensis IBL 4222]
Length = 293
Score = 34.8 bits (78), Expect = 4.4, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 2 QYSTIFI-ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFD 55
+ IFI + + M+++S + D ++S + E L ++ G+S +
Sbjct: 12 KKKKIFIGTIISCLMLALSACGSSDNVVTSKVGNVTEKELSKELRQQYGESTLYQ 66
>gi|169829790|ref|YP_001699948.1| ferric anguibactin-binding protein [Lysinibacillus sphaericus
C3-41]
gi|168994278|gb|ACA41818.1| Ferric anguibactin-binding protein precursor [Lysinibacillus
sphaericus C3-41]
Length = 339
Score = 34.8 bits (78), Expect = 4.4, Method: Composition-based stats.
Identities = 14/116 (12%), Positives = 32/116 (27%), Gaps = 7/116 (6%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ + IL A+ ++ ++ + D + +E+ +S + S
Sbjct: 1 MKKWKLLTILMAMMLLVLAACGSKDEAKEGDKGTSTDKPAEEKNEASAAYPITIP-GSTI 59
Query: 61 IRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
+ G D + ALG+ V + +
Sbjct: 60 EGRDGKTTFEEVKLDKIPEKVVVFDNGFLD------TLDALGVNPTAVVQDSLPSY 109
>gi|282880767|ref|ZP_06289463.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1]
gi|281305301|gb|EFA97365.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1]
Length = 314
Score = 34.8 bits (78), Expect = 4.5, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 43/106 (40%), Gaps = 7/106 (6%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADELGSRNSSIALGLRRAYA 108
VFF+ SS + L + L+ + + G + G + + L ++R +
Sbjct: 214 RQVFFEISSKQLSKEAEHTLDAVVDVLKNNRDLKVELTGFSSNDGPKAFNKDLAMKRMNS 273
Query: 109 VFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
V +Y V G++ +++ SYG + YA RR + +
Sbjct: 274 VRSYLVNHGVNTNQISALSYG----IDKKSEMKTYA--RRVELCIS 313
>gi|306821749|ref|ZP_07455345.1| oligopeptide ABC superfamily ATP binding cassette transporter,
binding protein [Eubacterium yurii subsp. margaretiae
ATCC 43715]
gi|304550218|gb|EFM38213.1| oligopeptide ABC superfamily ATP binding cassette transporter,
binding protein [Eubacterium yurii subsp. margaretiae
ATCC 43715]
Length = 553
Score = 34.8 bits (78), Expect = 4.5, Method: Composition-based stats.
Identities = 8/58 (13%), Positives = 20/58 (34%), Gaps = 1/58 (1%)
Query: 1 MQYSTIFIILSAI-TMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS 57
M+ ++F L + ++S G + ++ Q + V ++F
Sbjct: 1 MKKKSLFAALLSCTLLLSACGGGGTNPSEKPSGDNKPATTTQAKGDEKVLRTIFSKQG 58
>gi|256545442|ref|ZP_05472804.1| lipoprotein [Anaerococcus vaginalis ATCC 51170]
gi|256398838|gb|EEU12453.1| lipoprotein [Anaerococcus vaginalis ATCC 51170]
Length = 309
Score = 34.8 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 33/82 (40%), Gaps = 5/82 (6%)
Query: 1 MQYSTI-FIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSY 59
M++ + + LSA +++++ + K D + + S E+ S+ +S D +
Sbjct: 1 MKFKKVKVLALSATLVLALTACSKQENK----DNMNSNPSSVEKVESNSNNSNKMDDNKA 56
Query: 60 SIRPADIQVLSNLGSWLEKHDC 81
I + L S ++
Sbjct: 57 KIDELMKKQNDILASHDKQWQV 78
>gi|238785460|ref|ZP_04629444.1| hypothetical protein yberc0001_17840 [Yersinia bercovieri ATCC
43970]
gi|238713615|gb|EEQ05643.1| hypothetical protein yberc0001_17840 [Yersinia bercovieri ATCC
43970]
Length = 380
Score = 34.8 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 16/120 (13%), Positives = 30/120 (25%), Gaps = 8/120 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGL 103
+ F S + P +L + L + GH D+L N
Sbjct: 116 QIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPNKISLSGHTDDLPYANGERGYSN 175
Query: 104 R------RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
+ + ++V M +D NRR + + +
Sbjct: 176 WELSADRANASRRELLIGGLDEGKVLRVVGMASTMRLKEQASDD--PVNRRISILVLNKQ 233
>gi|206579013|ref|YP_002238759.1| hypothetical protein KPK_2933 [Klebsiella pneumoniae 342]
gi|288935692|ref|YP_003439751.1| hypothetical protein Kvar_2833 [Klebsiella variicola At-22]
gi|290509718|ref|ZP_06549089.1| ydgH [Klebsiella sp. 1_1_55]
gi|206568071|gb|ACI09847.1| conserved hypothetical protein [Klebsiella pneumoniae 342]
gi|288890401|gb|ADC58719.1| protein of unknown function DUF1471 [Klebsiella variicola At-22]
gi|289779112|gb|EFD87109.1| ydgH [Klebsiella sp. 1_1_55]
Length = 316
Score = 34.8 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 10/134 (7%), Positives = 39/134 (29%), Gaps = 1/134 (0%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLN-ESSLQEQFSSSVGDSVFFDTSSY 59
M+ + + +T ++S + + + + +++GD+V +
Sbjct: 1 MKLKNTLLASALLTTATLSAHAATELTPEQAAALKPYDRVVVTGRFNAIGDAVQAVSRKA 60
Query: 60 SIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGIS 119
A + + + + + + D ++ + + +
Sbjct: 61 DKDGAASFYVVDTSDYGNGGNWRVTADLYKDNAPQADAPKNRIINGVVELPKDQAVTLMP 120
Query: 120 ASRMKVTSYGKEMP 133
+ V + + P
Sbjct: 121 YDTVTVQGFYRSQP 134
>gi|149925576|ref|ZP_01913840.1| putative transmembrane protein [Limnobacter sp. MED105]
gi|149825693|gb|EDM84901.1| putative transmembrane protein [Limnobacter sp. MED105]
Length = 163
Score = 34.8 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 32/89 (35%), Gaps = 2/89 (2%)
Query: 2 QYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSI 61
++ T+F L+ ++M++ G D T+ ++ + V F+ TS +
Sbjct: 4 KFLTLFSTLAVVSMLAACGGDKAPQ--VDYVTIQGQTITPADYQGQVMLVNFWATSCTTC 61
Query: 62 RPADIQVLSNLGSWLEKHDCDFLIEGHAD 90
++ + ++ + D
Sbjct: 62 VKEMPDIVDTHNKFKDQGFRTIAVAMSYD 90
>gi|95931084|ref|ZP_01313811.1| polyheme membrane-associated cytochrome c [Desulfuromonas
acetoxidans DSM 684]
gi|95132893|gb|EAT14565.1| polyheme membrane-associated cytochrome c [Desulfuromonas
acetoxidans DSM 684]
Length = 762
Score = 34.8 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 13/101 (12%), Positives = 29/101 (28%), Gaps = 3/101 (2%)
Query: 1 MQYS---TIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS 57
M+ + F++LS+I +++ G ++ S ++ S +
Sbjct: 1 MKVKHWFSFFVVLSSILLLTACGSNSGSGGDQSAAPAEDDLGSDTDTGISYVGAATCIGC 60
Query: 58 SYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSS 98
+ +V L H AD +
Sbjct: 61 HEDFSWSSEEVADYLAGAHVIHSDHITQADAADGCLDCHDP 101
>gi|82702437|ref|YP_412003.1| flagellar motor protein MotB [Nitrosospira multiformis ATCC 25196]
gi|82410502|gb|ABB74611.1| OmpA/MotB [Nitrosospira multiformis ATCC 25196]
Length = 308
Score = 34.8 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 40/116 (34%), Gaps = 8/116 (6%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS-----RNSSIALGL 103
+ F + + P ++L LGS L + + GH D S+ L
Sbjct: 165 KNRPMFALARAELEPHTREILQKLGSVLNEMPNKLSLSGHTDSTPYASGEKNYSNWELSA 224
Query: 104 RRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
RA A + G++ ++ +V +D NRR + + RA
Sbjct: 225 DRANASRRELILGGMNEQKIMRVVGL-SSAVLFDRNDPTN-PVNRRISIIVMSNRA 278
>gi|153950639|ref|YP_001400614.1| flagellar motor protein MotB [Yersinia pseudotuberculosis IP 31758]
gi|152962134|gb|ABS49595.1| chemotaxis MotB protein [Yersinia pseudotuberculosis IP 31758]
Length = 433
Score = 34.8 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 39/121 (32%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F S + P +L + L + GH D+L S+
Sbjct: 150 QIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPNKLSLSGHTDDLPYARGERGYSN 209
Query: 99 IALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A +A G+ ++ +V M +D NRR + + +
Sbjct: 210 WELSADRANASRRELLAGGLDEGKILRVVGMASTMRLKEQASDD--PVNRRISILVLNKQ 267
Query: 158 A 158
+
Sbjct: 268 S 268
>gi|254830980|ref|ZP_05235635.1| hypothetical protein Lmon1_06449 [Listeria monocytogenes 10403S]
Length = 119
Score = 34.8 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 8/87 (9%), Positives = 26/87 (29%), Gaps = 6/87 (6%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ ++I IL A+ ++ +T+ + + + ++ +
Sbjct: 1 MKKTSIIFILCALLSITACSNTENETQATEATGTIEQVETDAILINNFKEK------KDK 54
Query: 61 IRPADIQVLSNLGSWLEKHDCDFLIEG 87
P + + ++ I
Sbjct: 55 YNPEAAIRFDIVDKYYDETGNKIKITD 81
>gi|126728677|ref|ZP_01744492.1| Outer membrane protein, OmpA/MotB family [Sagittula stellata E-37]
gi|126710607|gb|EBA09658.1| Outer membrane protein, OmpA/MotB family [Sagittula stellata E-37]
Length = 703
Score = 34.8 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNL-----GSWLEKHDCDFLIEGHADELGSRNSSIALGLR 104
D++ F+T+S +IRP + Q L+ L + FLIEGH D +G+ ++AL R
Sbjct: 587 DTINFETNSAAIRPDEAQELAALGNALKAFIDKNPSEVFLIEGHTDAVGNYAYNLALSDR 646
Query: 105 RAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYG 137
RA +V M + YG+ V
Sbjct: 647 RAESVALALTEYFKVPPENMVLQGYGESDLLVPT 680
>gi|75762742|ref|ZP_00742573.1| Peptidyl-prolyl cis-trans isomerase [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|74489762|gb|EAO53147.1| Peptidyl-prolyl cis-trans isomerase [Bacillus thuringiensis
serovar israelensis ATCC 35646]
Length = 153
Score = 34.4 bits (77), Expect = 4.8, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 2 QYSTIFI-ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFD 55
+ IFI + + M+++S + D ++S + E L ++ G+S +
Sbjct: 12 KKKKIFIGTIISCLMLALSACGSSDNVVTSKVGNVTEKELSKELRQQYGESTLYQ 66
>gi|325261772|ref|ZP_08128510.1| putative D-ribose-binding protein [Clostridium sp. D5]
gi|324033226|gb|EGB94503.1| putative D-ribose-binding protein [Clostridium sp. D5]
Length = 357
Score = 34.4 bits (77), Expect = 4.9, Method: Composition-based stats.
Identities = 9/96 (9%), Positives = 33/96 (34%), Gaps = 2/96 (2%)
Query: 1 MQYSTIF-IILSAITMMSISGIDNL-DTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSS 58
M + ++L+ + ++G + D+ + ++ + +S ++ F+ +++
Sbjct: 2 MNMKKVLTMVLAGCMVFGLAGCEKASDSGSADKGGGNADAEITIGYSFPGSNNEFWGSNA 61
Query: 59 YSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS 94
+ + L + D + S
Sbjct: 62 LNSAKQAAEALGFKLIADDCDYDQAEQISDVDSMIS 97
>gi|126699793|ref|YP_001088690.1| amino-acid ABC transporter substrate-binding protein [Clostridium
difficile 630]
gi|255101315|ref|ZP_05330292.1| amino-acid ABC transporter,substrate-binding protein [Clostridium
difficile QCD-63q42]
gi|255307191|ref|ZP_05351362.1| amino-acid ABC transporter,substrate-binding protein [Clostridium
difficile ATCC 43255]
gi|115251230|emb|CAJ69061.1| ABC-type transport system,cystine/aminoacid-family extracellular
solute-binding protein [Clostridium difficile]
Length = 267
Score = 34.4 bits (77), Expect = 4.9, Method: Composition-based stats.
Identities = 6/51 (11%), Positives = 22/51 (43%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDS 51
M+ + I+ + ++ + ++G + + K V+ ++ + + D
Sbjct: 1 MKKLKLIIMFALVSALLVTGCSSGNNKNKEEQKVIRVATSGTYYPFAFKDK 51
>gi|238795648|ref|ZP_04639162.1| hypothetical protein ymoll0001_14990 [Yersinia mollaretii ATCC
43969]
gi|238720374|gb|EEQ12176.1| hypothetical protein ymoll0001_14990 [Yersinia mollaretii ATCC
43969]
Length = 385
Score = 34.4 bits (77), Expect = 5.0, Method: Composition-based stats.
Identities = 16/120 (13%), Positives = 30/120 (25%), Gaps = 8/120 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGL 103
+ F S + P +L + L + GH D+L N
Sbjct: 116 QIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPNKISLSGHTDDLPYANGERGYSN 175
Query: 104 R------RAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
+ + ++V M +D NRR + + +
Sbjct: 176 WELSADRANASRRELLIGGLDEGKVLRVVGMASTMRLKEQASDD--PVNRRISILVLNKQ 233
>gi|228958588|ref|ZP_04120307.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228801099|gb|EEM47997.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar pakistani
str. T13001]
Length = 293
Score = 34.4 bits (77), Expect = 5.0, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 2 QYSTIFI-ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFD 55
+ IFI + + M+++S + D ++S + E L ++ G+S +
Sbjct: 12 KKKKIFIGTIISCVMLALSACGSSDNVVTSKVGNVTEKELSKELRQQYGESTLYQ 66
>gi|228939473|ref|ZP_04102061.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228972327|ref|ZP_04132938.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228978940|ref|ZP_04139306.1| Foldase protein prsA 1 [Bacillus thuringiensis Bt407]
gi|228780814|gb|EEM29026.1| Foldase protein prsA 1 [Bacillus thuringiensis Bt407]
gi|228787344|gb|EEM35312.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228820173|gb|EEM66210.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar berliner
ATCC 10792]
Length = 293
Score = 34.4 bits (77), Expect = 5.0, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 2 QYSTIFI-ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFD 55
+ IFI + + M+++S + D ++S + E L ++ G+S +
Sbjct: 12 KKKKIFIGTIISCVMLALSACGSSDNVVTSKVGNVTEKELSKELRQQYGESTLYQ 66
>gi|229127713|ref|ZP_04256702.1| Foldase protein prsA 1 [Bacillus cereus BDRD-Cer4]
gi|228655790|gb|EEL11639.1| Foldase protein prsA 1 [Bacillus cereus BDRD-Cer4]
Length = 293
Score = 34.4 bits (77), Expect = 5.0, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 2 QYSTIFI-ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFD 55
+ IFI + + M+++S + D ++S + E L ++ G+S +
Sbjct: 12 KKKKIFIGTIISCVMLALSACGSSDNVVTSKVGNVTEKELSKELRQQYGESTLYQ 66
>gi|229109756|ref|ZP_04239342.1| Foldase protein prsA 1 [Bacillus cereus Rock1-15]
gi|229144911|ref|ZP_04273308.1| Foldase protein prsA 1 [Bacillus cereus BDRD-ST24]
gi|229150538|ref|ZP_04278754.1| Foldase protein prsA 1 [Bacillus cereus m1550]
gi|228633031|gb|EEK89644.1| Foldase protein prsA 1 [Bacillus cereus m1550]
gi|228638633|gb|EEK95066.1| Foldase protein prsA 1 [Bacillus cereus BDRD-ST24]
gi|228673797|gb|EEL29055.1| Foldase protein prsA 1 [Bacillus cereus Rock1-15]
Length = 293
Score = 34.4 bits (77), Expect = 5.0, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 2 QYSTIFI-ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFD 55
+ IFI + + M+++S + D ++S + E L ++ G+S +
Sbjct: 12 KKKKIFIGTIISCVMLALSACGSSDNVVTSKVGNVTEKELSKELRQQYGESTLYQ 66
>gi|45441604|ref|NP_993143.1| flagellar motor protein MotB [Yersinia pestis biovar Microtus str.
91001]
gi|145599064|ref|YP_001163140.1| flagellar motor protein MotB [Yersinia pestis Pestoides F]
gi|45436465|gb|AAS62020.1| chemotaxis MotB protein [Yersinia pestis biovar Microtus str.
91001]
gi|145210760|gb|ABP40167.1| chemotaxis MotB protein [Yersinia pestis Pestoides F]
gi|320014810|gb|ADV98381.1| chemotaxis MotB protein [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 433
Score = 34.4 bits (77), Expect = 5.0, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 39/121 (32%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F S + P +L + L + GH D+L S+
Sbjct: 150 QIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPNKLSLSGHTDDLPYARGERGYSN 209
Query: 99 IALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A +A G+ ++ +V M +D NRR + + +
Sbjct: 210 WELSADRANASRRELLAGGLDEGKILRVVGMASTMRLKEQASDD--PVNRRISILVLNKQ 267
Query: 158 A 158
+
Sbjct: 268 S 268
>gi|51596729|ref|YP_070920.1| flagellar motor protein MotB [Yersinia pseudotuberculosis IP 32953]
gi|186895791|ref|YP_001872903.1| flagellar motor protein MotB [Yersinia pseudotuberculosis PB1/+]
gi|51590011|emb|CAH21644.1| chemotaxis MotB protein [Yersinia pseudotuberculosis IP 32953]
gi|186698817|gb|ACC89446.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis PB1/+]
Length = 439
Score = 34.4 bits (77), Expect = 5.0, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 39/121 (32%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F S + P +L + L + GH D+L S+
Sbjct: 150 QIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPNKLSLSGHTDDLPYARGERGYSN 209
Query: 99 IALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A +A G+ ++ +V M +D NRR + + +
Sbjct: 210 WELSADRANASRRELLAGGLDEGKILRVVGMASTMRLKEQASDD--PVNRRISILVLNKQ 267
Query: 158 A 158
+
Sbjct: 268 S 268
>gi|254525153|ref|ZP_05137208.1| chemotaxis MotB protein [Stenotrophomonas sp. SKA14]
gi|219722744|gb|EED41269.1| chemotaxis MotB protein [Stenotrophomonas sp. SKA14]
Length = 320
Score = 34.4 bits (77), Expect = 5.1, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 37/116 (31%), Gaps = 7/116 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD----ELGSRNSSI 99
+ FD S +++P Q+L L +L + GH D +
Sbjct: 164 QIVDKQNRPMFDLGSATLKPYTQQILHELAEYLNHVPNRISLTGHTDITAYSAARGYGNW 223
Query: 100 ALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L RA A + G+ S++ V + D NRR + +
Sbjct: 224 ELSADRANAARRALIDGGLEDSKITRVVGLSSSV-LFDKADPQN-PINRRISIVVM 277
>gi|312116152|ref|YP_004013748.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100]
gi|311221281|gb|ADP72649.1| OmpA/MotB domain protein [Rhodomicrobium vannielii ATCC 17100]
Length = 568
Score = 34.4 bits (77), Expect = 5.2, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 2/89 (2%)
Query: 65 DIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK 124
+ ++ L + + D L+ G D LG + LG RA AV + V G++ R+
Sbjct: 477 ASRKIAELAAIVANSDIRLLVVGFTDSLGQSERNQQLGQERAKAVVDELVKLGVAEDRLA 536
Query: 125 VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
S + + + NRR L
Sbjct: 537 TVSR-RTETVITTETGAT-SNNRRVEFQL 563
>gi|257065892|ref|YP_003152148.1| flavocytochrome c [Anaerococcus prevotii DSM 20548]
gi|256797772|gb|ACV28427.1| flavocytochrome c [Anaerococcus prevotii DSM 20548]
Length = 591
Score = 34.4 bits (77), Expect = 5.3, Method: Composition-based stats.
Identities = 17/114 (14%), Positives = 39/114 (34%), Gaps = 4/114 (3%)
Query: 1 MQYSTIF-IILSAITMMSISG---IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDT 56
M+ + I I+LSA + + G DN D V + + + + + +V F+
Sbjct: 1 MKKNKILPILLSAAMLFTACGNNTADNKDGAKEETAKVESFKATEAGHNGDIEATVNFEG 60
Query: 57 SSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVF 110
+ + LG +++ + + + + + AV
Sbjct: 61 DKIASIDLVHKETEGLGDEAADKIVKEIVDKQSINVDTVSGATVTSTALIEAVK 114
>gi|319650462|ref|ZP_08004603.1| Iron(III) dicitrate ABC transporter [Bacillus sp. 2_A_57_CT2]
gi|317397873|gb|EFV78570.1| Iron(III) dicitrate ABC transporter [Bacillus sp. 2_A_57_CT2]
Length = 322
Score = 34.4 bits (77), Expect = 5.3, Method: Composition-based stats.
Identities = 8/42 (19%), Positives = 21/42 (50%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQE 42
M++ ++ ILS T++ ++ N + + + D S ++
Sbjct: 1 MKFKSLLAILSVFTILFLAACGNNNEQDETADKEKEGSKTED 42
>gi|314935514|ref|ZP_07842866.1| conserved hypothetical protein [Staphylococcus hominis subsp.
hominis C80]
gi|313656079|gb|EFS19819.1| conserved hypothetical protein [Staphylococcus hominis subsp.
hominis C80]
Length = 444
Score = 34.4 bits (77), Expect = 5.4, Method: Composition-based stats.
Identities = 15/133 (11%), Positives = 40/133 (30%), Gaps = 7/133 (5%)
Query: 1 MQYSTIFIIL--SAITMMSISGIDNLDTKISSPDTVLNESSLQ-----EQFSSSVGDSVF 53
M+ + IF +L SA+ + + S DN NE S + + +
Sbjct: 1 MKKNKIFAVLTTSALLLAACSNGDNASDSGQKDGNQKNEQSSNKSGNSQSDALKKNNDKN 60
Query: 54 FDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYF 113
+ + ++ + + + D L++ D + +
Sbjct: 61 TNENKVDYPKDGVKGIYVTSNSTQGKKMDELVKFIKDSNLNTMVIDVKDDTGNITMKLNT 120
Query: 114 VARGISASRMKVT 126
+ + + + +
Sbjct: 121 GNKQVDKNTLDIV 133
>gi|288962674|ref|YP_003452968.1| chemotaxis protein [Azospirillum sp. B510]
gi|288914940|dbj|BAI76424.1| chemotaxis protein [Azospirillum sp. B510]
Length = 347
Score = 34.4 bits (77), Expect = 5.4, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 45/145 (31%), Gaps = 22/145 (15%)
Query: 23 NLDTKISSPDTVLNESSLQEQFSSSVGDSV---FFDTSSYSIRPADIQVLSNLGSWLEKH 79
+++ L + E + D F S + +++ + S L
Sbjct: 208 AASPDLNALQGSLVIQQVPEGLRVQLTDQARFSMFKVGSAQMNDQGRRLMRMVASALAAV 267
Query: 80 DCDFLIEGHAD----ELGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTS------Y 128
I GH D ++ + L RA A +A GI +R+ +V +
Sbjct: 268 PNPIGITGHTDGLGYAADAKYGNWELSSDRANAARRELIASGIPNTRIVRVEGRADLDHF 327
Query: 129 GKEMPSVYGHDEDAYAKNRRAIVFL 153
G P NRR + L
Sbjct: 328 GAGGPLDPS--------NRRISITL 344
>gi|30264686|ref|NP_847063.1| putative lipoprotein [Bacillus anthracis str. Ames]
gi|47530156|ref|YP_021505.1| putative lipoprotein [Bacillus anthracis str. 'Ames Ancestor']
gi|49187504|ref|YP_030757.1| putative lipoprotein [Bacillus anthracis str. Sterne]
gi|49480690|ref|YP_038662.1| hypothetical protein BT9727_4347 [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|65321982|ref|ZP_00394941.1| hypothetical protein Bant_01005504 [Bacillus anthracis str. A2012]
gi|165869598|ref|ZP_02214256.1| putative lipoprotein [Bacillus anthracis str. A0488]
gi|167633817|ref|ZP_02392140.1| putative lipoprotein [Bacillus anthracis str. A0442]
gi|167638067|ref|ZP_02396345.1| putative lipoprotein [Bacillus anthracis str. A0193]
gi|170685799|ref|ZP_02877022.1| putative lipoprotein [Bacillus anthracis str. A0465]
gi|170705513|ref|ZP_02895977.1| putative lipoprotein [Bacillus anthracis str. A0389]
gi|177651163|ref|ZP_02933994.1| putative lipoprotein [Bacillus anthracis str. A0174]
gi|190569077|ref|ZP_03021977.1| putative lipoprotein [Bacillus anthracis Tsiankovskii-I]
gi|196032721|ref|ZP_03100134.1| putative lipoprotein [Bacillus cereus W]
gi|218905843|ref|YP_002453677.1| putative lipoprotein [Bacillus cereus AH820]
gi|227817402|ref|YP_002817411.1| putative lipoprotein [Bacillus anthracis str. CDC 684]
gi|228948340|ref|ZP_04110623.1| hypothetical protein bthur0007_44660 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|229599988|ref|YP_002868895.1| putative lipoprotein [Bacillus anthracis str. A0248]
gi|254687423|ref|ZP_05151279.1| putative lipoprotein [Bacillus anthracis str. CNEVA-9066]
gi|254724986|ref|ZP_05186769.1| putative lipoprotein [Bacillus anthracis str. A1055]
gi|254736723|ref|ZP_05194429.1| putative lipoprotein [Bacillus anthracis str. Western North America
USA6153]
gi|254741760|ref|ZP_05199447.1| putative lipoprotein [Bacillus anthracis str. Kruger B]
gi|254754643|ref|ZP_05206678.1| putative lipoprotein [Bacillus anthracis str. Vollum]
gi|254757475|ref|ZP_05209502.1| putative lipoprotein [Bacillus anthracis str. Australia 94]
gi|30259361|gb|AAP28549.1| putative lipoprotein [Bacillus anthracis str. Ames]
gi|47505304|gb|AAT33980.1| putative lipoprotein [Bacillus anthracis str. 'Ames Ancestor']
gi|49181431|gb|AAT56807.1| lipoprotein, putative [Bacillus anthracis str. Sterne]
gi|49332246|gb|AAT62892.1| conserved hypothetical protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|164714427|gb|EDR19946.1| putative lipoprotein [Bacillus anthracis str. A0488]
gi|167513884|gb|EDR89252.1| putative lipoprotein [Bacillus anthracis str. A0193]
gi|167530618|gb|EDR93320.1| putative lipoprotein [Bacillus anthracis str. A0442]
gi|170129638|gb|EDS98501.1| putative lipoprotein [Bacillus anthracis str. A0389]
gi|170670263|gb|EDT21003.1| putative lipoprotein [Bacillus anthracis str. A0465]
gi|172082989|gb|EDT68051.1| putative lipoprotein [Bacillus anthracis str. A0174]
gi|190559859|gb|EDV13844.1| putative lipoprotein [Bacillus anthracis Tsiankovskii-I]
gi|195994150|gb|EDX58105.1| putative lipoprotein [Bacillus cereus W]
gi|218539242|gb|ACK91640.1| putative lipoprotein [Bacillus cereus AH820]
gi|227006610|gb|ACP16353.1| putative lipoprotein [Bacillus anthracis str. CDC 684]
gi|228811327|gb|EEM57665.1| hypothetical protein bthur0007_44660 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|229264396|gb|ACQ46033.1| putative lipoprotein [Bacillus anthracis str. A0248]
Length = 123
Score = 34.4 bits (77), Expect = 5.7, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 36/123 (29%), Gaps = 7/123 (5%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M++S + + +++ S + V + +E + ++VF
Sbjct: 5 MKFSMFMFLGVVLIILAACTTK-------SVEQVAVKEVPKEGYIILRNETVFLADDKTF 57
Query: 61 IRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA 120
++Q + LI D + + + + +Y V +
Sbjct: 58 ETKIELQNYIEQQMNQDYPSDIVLIFKDKDAYDQLKTGDKIKVWSSQTFESYPVKMIVEK 117
Query: 121 SRM 123
+
Sbjct: 118 FEI 120
>gi|119486428|ref|ZP_01620486.1| Transport-associated protein [Lyngbya sp. PCC 8106]
gi|119456330|gb|EAW37461.1| Transport-associated protein [Lyngbya sp. PCC 8106]
Length = 163
Score = 34.4 bits (77), Expect = 5.7, Method: Composition-based stats.
Identities = 11/47 (23%), Positives = 23/47 (48%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSS 47
M+ T F++ SA+ + +++ D+ T +P+TV + E
Sbjct: 1 MKKLTSFLLGSALLLSTVACTDDAKTSADAPNTVETTPDIPEAEQVQ 47
>gi|317057015|ref|YP_004105482.1| polysaccharide deacetylase [Ruminococcus albus 7]
gi|315449284|gb|ADU22848.1| polysaccharide deacetylase [Ruminococcus albus 7]
Length = 271
Score = 34.4 bits (77), Expect = 5.7, Method: Composition-based stats.
Identities = 14/152 (9%), Positives = 38/152 (25%), Gaps = 10/152 (6%)
Query: 1 MQYSTI--FIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSS 58
M + L +++ G+ + + D V+ + + S+ +
Sbjct: 1 MNKLILARLAALFTAGVLTACGVAVKSGRKGTADPVMLTTQTPKDISALSTEK--HGYGQ 58
Query: 59 YSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI 118
+ L + + D+ + + + + +
Sbjct: 59 GVQVDERNRTTGALYFNRDYGSYNAAAINEDDDAITLTFDQGYENGYTAKILDTLKEKDV 118
Query: 119 SASRMKVTSYGKEMP------SVYGHDEDAYA 144
A V Y + P GH ++
Sbjct: 119 KAIFFLVQDYAERNPELVQRMIDEGHTIANHS 150
>gi|228908084|ref|ZP_04071932.1| Foldase protein prsA 1 [Bacillus thuringiensis IBL 200]
gi|228851502|gb|EEM96308.1| Foldase protein prsA 1 [Bacillus thuringiensis IBL 200]
Length = 293
Score = 34.4 bits (77), Expect = 5.7, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 2 QYSTIFI-ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFD 55
+ IFI + + M+++S + D ++S + E L ++ G+S +
Sbjct: 12 KKKKIFIGTIISCMMLALSACGSSDNVVTSKVGNVTEKELSKELRQQYGESTLYQ 66
>gi|228921035|ref|ZP_04084370.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228838581|gb|EEM83887.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 293
Score = 34.4 bits (77), Expect = 5.7, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 2 QYSTIFI-ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFD 55
+ IFI + + M+++S + D ++S + E L ++ G+S +
Sbjct: 12 KKKKIFIGTIISCMMLALSACGSSDNVVTSKVGNVTEKELSKELRQQYGESTLYQ 66
>gi|229069842|ref|ZP_04203124.1| Foldase protein prsA 1 [Bacillus cereus F65185]
gi|228713245|gb|EEL65138.1| Foldase protein prsA 1 [Bacillus cereus F65185]
Length = 293
Score = 34.4 bits (77), Expect = 5.7, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 2 QYSTIFI-ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFD 55
+ IFI + + M+++S + D ++S + E L ++ G+S +
Sbjct: 12 KKKKIFIGTIISCMMLALSACGSSDNVVTSKVGNVTEKELSKELRQQYGESTLYQ 66
>gi|228952655|ref|ZP_04114731.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|229079483|ref|ZP_04212023.1| Foldase protein prsA 1 [Bacillus cereus Rock4-2]
gi|229178680|ref|ZP_04306044.1| Foldase protein prsA 1 [Bacillus cereus 172560W]
gi|228604838|gb|EEK62295.1| Foldase protein prsA 1 [Bacillus cereus 172560W]
gi|228703853|gb|EEL56299.1| Foldase protein prsA 1 [Bacillus cereus Rock4-2]
gi|228807121|gb|EEM53664.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar kurstaki
str. T03a001]
Length = 293
Score = 34.4 bits (77), Expect = 5.7, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 2 QYSTIFI-ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFD 55
+ IFI + + M+++S + D ++S + E L ++ G+S +
Sbjct: 12 KKKKIFIGTIISCMMLALSACGSSDNVVTSKVGNVTEKELSKELRQQYGESTLYQ 66
>gi|229190397|ref|ZP_04317398.1| Foldase protein prsA 1 [Bacillus cereus ATCC 10876]
gi|228593181|gb|EEK50999.1| Foldase protein prsA 1 [Bacillus cereus ATCC 10876]
Length = 293
Score = 34.4 bits (77), Expect = 5.7, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 2 QYSTIFI-ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFD 55
+ IFI + + M+++S + D ++S + E L ++ G+S +
Sbjct: 12 KKKKIFIGTIISCMMLALSACGSSDNVVTSKVGNVTEKELSKELRQQYGESTLYQ 66
>gi|254476965|ref|ZP_05090351.1| outer membrane protein, OmpA/MotB family [Ruegeria sp. R11]
gi|214031208|gb|EEB72043.1| outer membrane protein, OmpA/MotB family [Ruegeria sp. R11]
Length = 587
Score = 34.4 bits (77), Expect = 5.7, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-----FLIEGHADELGSRNSSIALGLR 104
DSV FDT S IRP + + L+ LG+ L + FLIEGH D +G+ ++AL R
Sbjct: 471 DSVNFDTGSSVIRPQEAEELAALGNALRELIDRNPAEVFLIEGHTDAVGAATFNLALSDR 530
Query: 105 RAYAVFNYFVARGI-SASRMKVTSYGKEMPSVYGHDED 141
RA V M V YG+ +V +
Sbjct: 531 RAETVALALTEYFDVPPENMVVQGYGESDLAVRTLTAE 568
>gi|291485730|dbj|BAI86805.1| hypothetical protein BSNT_04831 [Bacillus subtilis subsp. natto
BEST195]
Length = 422
Score = 34.4 bits (77), Expect = 5.9, Method: Composition-based stats.
Identities = 7/30 (23%), Positives = 18/30 (60%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISS 30
M+ +F+I++A++M +I+G + +
Sbjct: 1 MKKMLLFLIIAAVSMFTIAGCSSQSSSADG 30
>gi|225377740|ref|ZP_03754961.1| hypothetical protein ROSEINA2194_03391 [Roseburia inulinivorans
DSM 16841]
gi|225210417|gb|EEG92771.1| hypothetical protein ROSEINA2194_03391 [Roseburia inulinivorans
DSM 16841]
Length = 410
Score = 34.4 bits (77), Expect = 5.9, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 24/57 (42%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS 57
M+ + ++L T +S++G + + + + V N S +E + + +
Sbjct: 1 MKKRVLALLLCVSTAISMTGCGSKGESVEATEAVENTESTEEVPAVPLAQYDLKGSD 57
>gi|293411918|ref|ZP_06654643.1| predicted protein [Escherichia coli B354]
gi|291469473|gb|EFF11962.1| predicted protein [Escherichia coli B354]
Length = 137
Score = 34.0 bits (76), Expect = 6.0, Method: Composition-based stats.
Identities = 7/62 (11%), Positives = 19/62 (30%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M + + + +++ ++ G D K + +++ S F T
Sbjct: 1 MSKKKLILTGALLSLFALVGCKPTDEKAITLGQQAIADDMKDPTSVMFRKDKFVRTDHDD 60
Query: 61 IR 62
Sbjct: 61 GS 62
>gi|326795804|ref|YP_004313624.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
gi|326546568|gb|ADZ91788.1| OmpA/MotB domain protein [Marinomonas mediterranea MMB-1]
Length = 300
Score = 34.0 bits (76), Expect = 6.1, Method: Composition-based stats.
Identities = 27/110 (24%), Positives = 39/110 (35%), Gaps = 7/110 (6%)
Query: 49 GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS----RNSSIALGLR 104
F+ S + P VL +GS L + I GH D + L
Sbjct: 159 PTKPMFERGSARLMPDSENVLLGIGSILARLKNPISISGHTDSSPYVDEREIDNWDLSSA 218
Query: 105 RAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
RA + G+S RM +V +P Y + A+NRR + L
Sbjct: 219 RANSARKIIEEGGVSDKRMAQVIGLADSIP--YNRFDPTSAENRRISITL 266
>gi|170023989|ref|YP_001720494.1| flagellar motor protein MotB [Yersinia pseudotuberculosis YPIII]
gi|169750523|gb|ACA68041.1| OmpA/MotB domain protein [Yersinia pseudotuberculosis YPIII]
Length = 451
Score = 34.0 bits (76), Expect = 6.1, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 39/121 (32%), Gaps = 8/121 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F S + P +L + L + GH D+L S+
Sbjct: 150 QIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPNKLSLSGHTDDLPYARGERGYSN 209
Query: 99 IALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A +A G+ ++ +V M +D NRR + + +
Sbjct: 210 WELSADRANASRRELLAGGLDEGKILRVVGMASTMRLKEQASDD--PVNRRISILVLNKQ 267
Query: 158 A 158
+
Sbjct: 268 S 268
>gi|226949696|ref|YP_002804787.1| hypothetical protein CLM_2636 [Clostridium botulinum A2 str. Kyoto]
gi|226841879|gb|ACO84545.1| hypothetical protein CLM_2636 [Clostridium botulinum A2 str. Kyoto]
Length = 129
Score = 34.0 bits (76), Expect = 6.2, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 39/123 (31%), Gaps = 6/123 (4%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ I +LSA + +++ I S TV E S + +V + S
Sbjct: 1 MRKKKIIFLLSACIISNLA-----LGSIVSAKTVQAEESSVKTVQVKENTTVLNEDEYRS 55
Query: 61 IRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA 120
R A +L L ++ D I + D + G R N +
Sbjct: 56 TRAAMGPMLEFLAGYIASKAIDGFIANYQDLYR-WSQRDPSGYNRWVNAVNAGKNHCYNM 114
Query: 121 SRM 123
+
Sbjct: 115 CPI 117
>gi|254476621|ref|ZP_05090007.1| OmpA family protein [Ruegeria sp. R11]
gi|214030864|gb|EEB71699.1| OmpA family protein [Ruegeria sp. R11]
Length = 176
Score = 34.0 bits (76), Expect = 6.3, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 47/134 (35%), Gaps = 14/134 (10%)
Query: 32 DTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---FLIEGH 88
+E + +FF + + P + + L L + GH
Sbjct: 49 APQPKPQPDRELTAQDRESHIFFLSGGSRLSPQMERQVVLLAGVLNTAPMKDACLRLTGH 108
Query: 89 ADELGSRNSSIALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAY---- 143
+D G R+++ L +RA V R R++ V G+E P + +
Sbjct: 109 SDASGGRDANRRLSEQRAEVVAAALRRRLDRGDRVEEVRGVGEETPL------EGWPSTA 162
Query: 144 AKNRRAIVFLKGCR 157
+NRR + + CR
Sbjct: 163 RENRRVSIEARRCR 176
>gi|319902635|ref|YP_004162363.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108]
gi|319417666|gb|ADV44777.1| OmpA/MotB domain protein [Bacteroides helcogenes P 36-108]
Length = 386
Score = 34.0 bits (76), Expect = 6.4, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 50/121 (41%), Gaps = 12/121 (9%)
Query: 35 LNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH-DCDFLIEGHAD-EL 92
+ ++ + ++FF S I + L+ + D + I G+ D
Sbjct: 272 AETKEVVKEVQVAGPRAIFFKIGSAKIDDYGKVNIQLAAKTLKGNSDRKYKIAGYCDKAT 331
Query: 93 GSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKN--RRAI 150
GS + + L +RA AV++ +A G+ ++++ +G E+ + KN R +
Sbjct: 332 GSSSWNQKLSEKRAQAVYDALIAEGVDKDQLELVGFG--------GTENMFGKNFLNRVV 383
Query: 151 V 151
+
Sbjct: 384 I 384
>gi|221067138|ref|ZP_03543243.1| OmpA/MotB domain protein [Comamonas testosteroni KF-1]
gi|220712161|gb|EED67529.1| OmpA/MotB domain protein [Comamonas testosteroni KF-1]
Length = 174
Score = 34.0 bits (76), Expect = 6.4, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 48/134 (35%), Gaps = 7/134 (5%)
Query: 20 GIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKH 79
+ ++ V+ + +F + + + LS++ + +
Sbjct: 46 TEAAVSAPSATNVPVVVIEETARVIVENGVVKFYFVSGKAEVAAGANEALSDVVKGVAE- 104
Query: 80 DCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHD 139
LI G D GS + L +RA AV +A G++ ++++ E G +
Sbjct: 105 GKRALISGFHDATGSAEINAELAKQRAQAVQAALMALGVAEDKVELKK--PEQTQADGSN 162
Query: 140 EDAYAKNRRAIVFL 153
+A RR V L
Sbjct: 163 AEA----RRVEVIL 172
>gi|291544304|emb|CBL17413.1| Protein of unknown function (DUF3048) [Ruminococcus sp. 18P13]
Length = 365
Score = 34.0 bits (76), Expect = 6.4, Method: Composition-based stats.
Identities = 10/45 (22%), Positives = 21/45 (46%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFS 45
M+ I IL A T+++ +G N + S + ++ +Q +
Sbjct: 1 MKIRRIAAILLACTLLTAAGCGNKQEESSGMASTPATTAGTQQTA 45
>gi|325068012|ref|ZP_08126685.1| hypothetical protein AoriK_09336 [Actinomyces oris K20]
Length = 209
Score = 34.0 bits (76), Expect = 6.5, Method: Composition-based stats.
Identities = 7/20 (35%), Positives = 9/20 (45%)
Query: 132 MPSVYGHDEDAYAKNRRAIV 151
P V + A A NRR +
Sbjct: 1 EPKVNDTTDQARAVNRRVEI 20
>gi|291167111|gb|EFE29157.1| antioxidant, AhpC/TSA family [Filifactor alocis ATCC 35896]
Length = 300
Score = 34.0 bits (76), Expect = 6.5, Method: Composition-based stats.
Identities = 10/57 (17%), Positives = 19/57 (33%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTS 57
M TI I+ + S+S D+ ++ D + Q + + D
Sbjct: 3 MMKKTILIMTVLTMITSLSACGKSDSSSNATDQPASNQQEQAANTEAFPKFTAKDFD 59
>gi|228965300|ref|ZP_04126393.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228794385|gb|EEM41898.1| Foldase protein prsA 1 [Bacillus thuringiensis serovar sotto str.
T04001]
Length = 158
Score = 34.0 bits (76), Expect = 6.5, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 2 QYSTIFI-ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFD 55
+ IFI + + M+++S + D ++S + E L ++ G+S +
Sbjct: 12 KKKKIFIGTIISCVMLALSACGSSDNVVTSKVGNVTEKELSKELRQQYGESTLYQ 66
>gi|229044061|ref|ZP_04191749.1| Foldase protein prsA 1 [Bacillus cereus AH676]
gi|228725272|gb|EEL76541.1| Foldase protein prsA 1 [Bacillus cereus AH676]
Length = 141
Score = 34.0 bits (76), Expect = 6.5, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 2 QYSTIFI-ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFD 55
+ IFI + + M+++S + D ++S + E L ++ G+S +
Sbjct: 12 KKKKIFIGTIISCVMLALSACGSSDNVVTSKVGNVTEKELSKELRQQYGESTLYQ 66
>gi|126650456|ref|ZP_01722679.1| hypothetical protein BB14905_07698 [Bacillus sp. B14905]
gi|126592612|gb|EAZ86611.1| hypothetical protein BB14905_07698 [Bacillus sp. B14905]
Length = 339
Score = 34.0 bits (76), Expect = 6.5, Method: Composition-based stats.
Identities = 7/47 (14%), Positives = 19/47 (40%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSS 47
M+ + +L A+ ++ ++ + D + +EQ +S
Sbjct: 1 MKKWKLLTVLMAMMLLVLAACGSKDEAKEEDKGTSTDKPAEEQNEAS 47
>gi|238916134|ref|YP_002929651.1| peptidylprolyl isomerase [Eubacterium eligens ATCC 27750]
gi|238871494|gb|ACR71204.1| peptidylprolyl isomerase [Eubacterium eligens ATCC 27750]
Length = 405
Score = 34.0 bits (76), Expect = 6.6, Method: Composition-based stats.
Identities = 9/71 (12%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDS--VFFDTSS 58
M+ ++L S+ D+ ++ + +N +++++++ D+ ++ S
Sbjct: 11 MKKKLFSVLLVGALAASLVACDSKKKEVDKTPSTVNTEINADEYAATITDNAGIYKTFVS 70
Query: 59 YSIRPADIQVL 69
S L
Sbjct: 71 LSDWKGMSVDL 81
>gi|296331754|ref|ZP_06874221.1| putative fructose amino acid-binding lipoprotein [Bacillus
subtilis subsp. spizizenii ATCC 6633]
gi|305675856|ref|YP_003867528.1| putative fructose amino acid-binding lipoprotein [Bacillus
subtilis subsp. spizizenii str. W23]
gi|296151079|gb|EFG91961.1| putative fructose amino acid-binding lipoprotein [Bacillus
subtilis subsp. spizizenii ATCC 6633]
gi|305414100|gb|ADM39219.1| putative fructose amino acid-binding lipoprotein [Bacillus
subtilis subsp. spizizenii str. W23]
Length = 422
Score = 34.0 bits (76), Expect = 6.7, Method: Composition-based stats.
Identities = 7/30 (23%), Positives = 19/30 (63%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISS 30
M+ +F+I++A++M++I+G + +
Sbjct: 1 MKKMLMFLIIAAVSMLTIAGCSSQSSSADG 30
>gi|118497351|ref|YP_898401.1| OmpA family protein [Francisella tularensis subsp. novicida U112]
gi|195536039|ref|ZP_03079046.1| outer membrane associated protein [Francisella tularensis subsp.
novicida FTE]
gi|208779140|ref|ZP_03246486.1| outer membrane associated protein [Francisella novicida FTG]
gi|118423257|gb|ABK89647.1| OmpA family protein [Francisella novicida U112]
gi|194372516|gb|EDX27227.1| outer membrane associated protein [Francisella tularensis subsp.
novicida FTE]
gi|208744940|gb|EDZ91238.1| outer membrane associated protein [Francisella novicida FTG]
Length = 392
Score = 34.0 bits (76), Expect = 6.7, Method: Composition-based stats.
Identities = 15/120 (12%), Positives = 45/120 (37%), Gaps = 7/120 (5%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGS---- 94
+V F ++ + +++ ++++ + ++G+A + +
Sbjct: 268 TVNGDDVTVYLDTKFAYDKATLNAKGKKAIASFVNFIKDSNIGSVTVKGYASQGQTGSEF 327
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ L +RA AV +Y G+ + ++ +G + G + +N+R +
Sbjct: 328 DIYNQKLSEKRAQAVADYMKQLGLDSEKIITKGFGYDDTL--GGIPKSDPRNQRVEASVS 385
>gi|296157481|ref|ZP_06840316.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
gi|295892253|gb|EFG72036.1| OmpA/MotB domain protein [Burkholderia sp. Ch1-1]
Length = 335
Score = 34.0 bits (76), Expect = 6.7, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 40/114 (35%), Gaps = 8/114 (7%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSSIALGLRR 105
F T+ + P +L +G L +++GH D S+ L R
Sbjct: 178 RPMFATAKDQVEPYMRDILREIGHTLNDVPNRIIVQGHTDAAQYAGGEKGYSNWELSADR 237
Query: 106 AYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
A A +A G+ ++ M+V + +NRR + + ++
Sbjct: 238 ANASRRELIAGGMDEAKVMRVLGLASTQ--NLNKADPMDPENRRISIIVLNKKS 289
>gi|254293721|ref|YP_003059744.1| OmpA/MotB domain protein [Hirschia baltica ATCC 49814]
gi|254042252|gb|ACT59047.1| OmpA/MotB domain protein [Hirschia baltica ATCC 49814]
Length = 303
Score = 34.0 bits (76), Expect = 6.7, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 44/122 (36%), Gaps = 9/122 (7%)
Query: 39 SLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR 95
E + D F +S P ++L+ + + K I GH +L +
Sbjct: 171 QTPEGMRIQIVDQEGRAMFAAASAKPLPRAEKILAAVSQVIMKLPNRVSISGHTGDLPTG 230
Query: 96 ---NSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIV 151
S+ L RA + + + G+ A R+ +V+ P D+ NRR +
Sbjct: 231 VEGYSNWQLSSDRANSARSILESSGLDADRIYQVSGKAGSEPLYP--DDPDLPGNRRISI 288
Query: 152 FL 153
L
Sbjct: 289 VL 290
>gi|84502672|ref|ZP_01000791.1| Outer membrane protein, OmpA/MotB family protein [Oceanicola
batsensis HTCC2597]
gi|84389067|gb|EAQ01865.1| Outer membrane protein, OmpA/MotB family protein [Oceanicola
batsensis HTCC2597]
Length = 681
Score = 34.0 bits (76), Expect = 6.7, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-----FLIEGHADELGSRNSSIALGLR 104
D++ F+T S IRPA+ + L+ LG + + + FLIEGH D +GS + ++AL R
Sbjct: 566 DNINFETGSAVIRPAEAEELARLGQLMRERIEENPGEIFLIEGHTDAVGSGSYNLALSDR 625
Query: 105 RAYAVFNYFVARGI-SASRMKVTSYGKEM 132
RA +V M + YG+
Sbjct: 626 RAESVALALTEYFDVPPENMVIQGYGETD 654
>gi|330993557|ref|ZP_08317492.1| hypothetical protein SXCC_03456 [Gluconacetobacter sp. SXCC-1]
gi|329759587|gb|EGG76096.1| hypothetical protein SXCC_03456 [Gluconacetobacter sp. SXCC-1]
Length = 124
Score = 34.0 bits (76), Expect = 6.9, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 40/104 (38%), Gaps = 6/104 (5%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
VFF +S + V++ + +EG+A ++ L + RA V
Sbjct: 26 VFFTENSTQLDTPAQTVITQAAQRAVASHANVRVEGYAAASHDLSADELLAIDRAKVVAR 85
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKG 155
V G+ SR++ + P ++E +RR + + G
Sbjct: 86 QLVVDGVDTSRIR------QQPRGPMNNESGALASRRVEIEVGG 123
>gi|307731388|ref|YP_003908612.1| OmpA/MotB domain-containing protein [Burkholderia sp. CCGE1003]
gi|307585923|gb|ADN59321.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1003]
Length = 335
Score = 34.0 bits (76), Expect = 6.9, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 41/116 (35%), Gaps = 12/116 (10%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSSIALGLRR 105
F T+ + P +L +G L +++GH D + S+ L R
Sbjct: 178 RPMFATAKDQVEPYMRDILREIGHTLNDVPNRIIVQGHTDAVQYAGGEKGYSNWELSADR 237
Query: 106 AYAVFNYFVARGISASR-MKVTSYGKEMPS--VYGHDEDAYAKNRRAIVFLKGCRA 158
A A +A G+ ++ M+V D + NRR + + ++
Sbjct: 238 ANASRRELIAGGMDEAKVMRVLGLASTQNLNKADPLDPE----NRRISIIVLNRKS 289
>gi|332882944|ref|ZP_08450551.1| hypothetical protein HMPREF9074_06363 [Capnocytophaga sp. oral
taxon 329 str. F0087]
gi|332679152|gb|EGJ52142.1| hypothetical protein HMPREF9074_06363 [Capnocytophaga sp. oral
taxon 329 str. F0087]
Length = 469
Score = 34.0 bits (76), Expect = 6.9, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 28/74 (37%), Gaps = 1/74 (1%)
Query: 1 MQYSTIFIILSAITMMSI-SGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSY 59
M++ T FI L + ++ D + S + + S + S + DSV +++S
Sbjct: 1 MKFKTSFITLIGLCSVACDDTTDTIGIFTDSDNINASTSVYEASTQSLLADSVLSNSNSS 60
Query: 60 SIRPADIQVLSNLG 73
+ +
Sbjct: 61 YLGRMTDPETNMQI 74
>gi|299538240|ref|ZP_07051525.1| ferric anguibactin-binding protein precursor [Lysinibacillus
fusiformis ZC1]
gi|298726442|gb|EFI67032.1| ferric anguibactin-binding protein precursor [Lysinibacillus
fusiformis ZC1]
Length = 341
Score = 34.0 bits (76), Expect = 6.9, Method: Composition-based stats.
Identities = 6/45 (13%), Positives = 17/45 (37%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFS 45
M+ + +L A+ ++ ++ + D + +EQ
Sbjct: 1 MKKWKLLTVLMAMMLLVLAACGSKDEAKEDDKGTSTDKPAEEQNE 45
>gi|238795043|ref|ZP_04638637.1| hypothetical protein yinte0001_4570 [Yersinia intermedia ATCC
29909]
gi|238725644|gb|EEQ17204.1| hypothetical protein yinte0001_4570 [Yersinia intermedia ATCC
29909]
Length = 388
Score = 34.0 bits (76), Expect = 6.9, Method: Composition-based stats.
Identities = 18/122 (14%), Positives = 30/122 (24%), Gaps = 12/122 (9%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGL 103
+ F S + P +L + L + GH D+L N
Sbjct: 141 QIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPNKISLSGHTDDLPYANGERGYSN 200
Query: 104 R------RAYAVFNYFVARGISASRMKVTSYGKEMPSV--YGHDEDAYAKNRRAIVFLKG 155
+ V ++V M G D NRR + +
Sbjct: 201 WELSADRANASRRELLVGGLDEGKVLRVVGMASTMRLKEQPGDDPV----NRRISILVLN 256
Query: 156 CR 157
+
Sbjct: 257 KQ 258
>gi|261341475|ref|ZP_05969333.1| chemotaxis protein LafU [Enterobacter cancerogenus ATCC 35316]
gi|288316271|gb|EFC55209.1| chemotaxis protein LafU [Enterobacter cancerogenus ATCC 35316]
Length = 306
Score = 34.0 bits (76), Expect = 6.9, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 45/135 (33%), Gaps = 8/135 (5%)
Query: 26 TKISSPDTVLNESSLQEQFSSSVGD---SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD 82
T + L + + + D F SS + P ++L+ L K D
Sbjct: 141 TSAYDAQSNLKIEIVPQGLRILITDDQKREMFQRSSAILTPFFKRLLTEFAPALNKIDNK 200
Query: 83 FLIEGHADELGSR----NSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGH 138
+I GH D R ++ L RA G+ ++ S + +
Sbjct: 201 IIITGHTDATRFRDQDLYNNYNLSGERAMQARKVLTHAGLDQDKVLQVSGMADQMLLDPA 260
Query: 139 DEDAYAKNRRAIVFL 153
+ + + NRR + +
Sbjct: 261 NPLS-SSNRRIEIMV 274
>gi|328676839|gb|AEB27709.1| Outer membrane protein A precursor [Francisella cf. novicida Fx1]
Length = 392
Score = 34.0 bits (76), Expect = 7.0, Method: Composition-based stats.
Identities = 15/120 (12%), Positives = 45/120 (37%), Gaps = 7/120 (5%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGS---- 94
+V F ++ + +++ ++++ + ++G+A + +
Sbjct: 268 TVNGDDVTVYLDTKFAYDKATLNAKGKKAIASFVNFIKDSNIGSVTVKGYASQGQTSSEF 327
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ L +RA AV +Y G+ + ++ +G + G + +N+R +
Sbjct: 328 DIYNQKLSEKRAQAVADYMKQLGLDSEKIITKGFGYDDTL--GGIPKSDPRNQRVEASVS 385
>gi|254372716|ref|ZP_04988205.1| outer membrane associated protein [Francisella tularensis subsp.
novicida GA99-3549]
gi|151570443|gb|EDN36097.1| outer membrane associated protein [Francisella novicida GA99-3549]
Length = 393
Score = 34.0 bits (76), Expect = 7.0, Method: Composition-based stats.
Identities = 15/120 (12%), Positives = 45/120 (37%), Gaps = 7/120 (5%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGS---- 94
+V F ++ + +++ ++++ + ++G+A + +
Sbjct: 269 TVNGDDVTVYLDTKFAYDKATLNAKGKKAIASFVNFIKDSNIGSVTVKGYASQGQTGSEF 328
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ L +RA AV +Y G+ + ++ +G + G + +N+R +
Sbjct: 329 DIYNQKLSEKRAQAVADYMKQLGLDSEKIITKGFGYDDTL--GGIPKSDPRNQRVEASVS 386
>gi|254487666|ref|ZP_05100871.1| chemotaxis protein MotB [Roseobacter sp. GAI101]
gi|214044535|gb|EEB85173.1| chemotaxis protein MotB [Roseobacter sp. GAI101]
Length = 280
Score = 34.0 bits (76), Expect = 7.1, Method: Composition-based stats.
Identities = 15/111 (13%), Positives = 30/111 (27%), Gaps = 7/111 (6%)
Query: 47 SVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSS---IALGL 103
V D F ++L + + + H L
Sbjct: 171 DVEDVPLFKNGGDQPTQMLRELLEVIVDASKIVTNKIAVAAHVRSNPIVAVENPVWDLSA 230
Query: 104 RRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
+R G+ +R++ VT + P+ + +N R + L
Sbjct: 231 KRGTQTRILLEKLGVKPARIERVTGFADRKPAAIDTMDV---RNNRVEIIL 278
>gi|187931912|ref|YP_001891897.1| outer membrane protein FopA [Francisella tularensis subsp.
mediasiatica FSC147]
gi|187712821|gb|ACD31118.1| outer membrane protein FopA [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 392
Score = 34.0 bits (76), Expect = 7.1, Method: Composition-based stats.
Identities = 14/124 (11%), Positives = 43/124 (34%), Gaps = 15/124 (12%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD-FLIEGHADELGS---- 94
+V + F ++ + +++ ++++ + ++G+A + +
Sbjct: 268 TVNGDDVTVYLDIKFAYDKATLNAKGKKAIASFVNFIKDSNISSVTVKGYASQGQTGSEF 327
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDA----YAKNRRAI 150
+ L +RA AV +Y G+ + ++ +G +N+R
Sbjct: 328 DIYNQKLSEKRAQAVADYMKQLGLDSEKIITKGFGY------NDTLSGIHKSDPRNQRVE 381
Query: 151 VFLK 154
+
Sbjct: 382 ASVS 385
>gi|330815146|ref|YP_004358851.1| MotB [Burkholderia gladioli BSR3]
gi|327367539|gb|AEA58895.1| MotB [Burkholderia gladioli BSR3]
Length = 361
Score = 34.0 bits (76), Expect = 7.1, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 44/124 (35%), Gaps = 12/124 (9%)
Query: 45 SSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSSI 99
F SS ++ P +L +G L +++GH D + S+
Sbjct: 173 IVDTQKRPMFALSSDAVEPYMRDILREIGKTLNDVPNRIVMQGHTDAVPYSGGEKGYSNW 232
Query: 100 ALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPS--VYGHDEDAYAKNRRAIVFLKGC 156
L RA A +A G+ ++ ++VT D + NRR + +
Sbjct: 233 ELSADRANASRRELIAGGMDEAKVLRVTGLASTQNLNKADPLDPE----NRRISILVLNR 288
Query: 157 RANT 160
++ T
Sbjct: 289 KSET 292
>gi|300309835|ref|YP_003773927.1| outer membrane protein peptidoglycan-associated (lipo)protein
[Herbaspirillum seropedicae SmR1]
gi|300072620|gb|ADJ62019.1| outer membrane protein peptidoglycan-associated (lipo)protein
[Herbaspirillum seropedicae SmR1]
Length = 232
Score = 34.0 bits (76), Expect = 7.1, Method: Composition-based stats.
Identities = 28/189 (14%), Positives = 52/189 (27%), Gaps = 41/189 (21%)
Query: 6 IFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGD--------------- 50
+F++L+A M+ + L +LQ++FS +
Sbjct: 24 VFMLLTAAFMLRVEQTTTLVVNEFEETKSDMLQALQKEFSRDLKQWNAELLGDMTIRFND 83
Query: 51 -SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCD---------FLIEGHA--------DEL 92
+V F T S +RP Q+L + IEGH D
Sbjct: 84 PTVLFATGSAELRPKFKQILRDFFPRYVTMLTSDKYRDAIKEIRIEGHTSRSWTNSTDTK 143
Query: 93 GSRNSSIALGLRRAYAVFNYF-------VARGISASRMKVTSYGKEMPSVYGHD-EDAYA 144
+ ++ L R + + + + P + A
Sbjct: 144 TAYFLNMELSQARTRSALEFLLRLPAVERQQDWLVGHVTANGLSSSKPISPDDNSAAAQL 203
Query: 145 KNRRAIVFL 153
N+R +
Sbjct: 204 ANQRVEFRI 212
>gi|261367664|ref|ZP_05980547.1| putative lipoprotein [Subdoligranulum variabile DSM 15176]
gi|282570456|gb|EFB75991.1| putative lipoprotein [Subdoligranulum variabile DSM 15176]
Length = 735
Score = 34.0 bits (76), Expect = 7.1, Method: Composition-based stats.
Identities = 6/40 (15%), Positives = 17/40 (42%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSL 40
M+ ++LSA + +G + I + + +++
Sbjct: 1 MKKRIASLLLSAAMLAVCAGCQSTSASIPTDSSPVSQPDT 40
>gi|238758125|ref|ZP_04619305.1| hypothetical protein yaldo0001_12650 [Yersinia aldovae ATCC 35236]
gi|238703663|gb|EEP96200.1| hypothetical protein yaldo0001_12650 [Yersinia aldovae ATCC 35236]
Length = 364
Score = 34.0 bits (76), Expect = 7.2, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 38/120 (31%), Gaps = 8/120 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F S + P +L + L + GH D+L S+
Sbjct: 116 QIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPNKISLSGHTDDLPYATGERGYSN 175
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A +A G+ + ++V M +D NRR + + +
Sbjct: 176 WELSADRANASRRELLAGGLDDGKVLRVVGMASTMRLKEQTSDD--PVNRRISILVLNKQ 233
>gi|227535906|ref|ZP_03965955.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33300]
gi|227244149|gb|EEI94164.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33300]
Length = 546
Score = 34.0 bits (76), Expect = 7.2, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 42/133 (31%), Gaps = 4/133 (3%)
Query: 1 MQYST-IFIILSAITMMSISG-IDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSS 58
M+ I +LSA+++ + S +D D S+ TV + D +
Sbjct: 1 MKKIIYIATVLSALSLSACSKWLDVNDNPNSANATVPTAEQRLPPILAQFADGYESAGTR 60
Query: 59 YSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI 118
S + V++ + + + + A+ ++ N A
Sbjct: 61 TSFITQQLAVVNASNNNWNMTRWNLTNAAIGWPWQAWYVNTAVNIQPMIDAANKVGANHY 120
Query: 119 --SASRMKVTSYG 129
A MK +G
Sbjct: 121 VGVAKIMKAWGFG 133
>gi|29346901|ref|NP_810404.1| hypothetical protein BT_1491 [Bacteroides thetaiotaomicron
VPI-5482]
gi|29338799|gb|AAO76598.1| conserved hypothetical protein [Bacteroides thetaiotaomicron
VPI-5482]
Length = 256
Score = 34.0 bits (76), Expect = 7.2, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 23/62 (37%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ ++F+++S S D + S + L E+ + + V+F
Sbjct: 5 MKKLSLFLLVSVFAFCGCSDDDEKMEVVISFENQLTEAESEFKTDLGEKGEVYFKYEISD 64
Query: 61 IR 62
+
Sbjct: 65 PQ 66
>gi|325849119|ref|ZP_08170611.1| putative lipoprotein [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325480364|gb|EGC83427.1| putative lipoprotein [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 201
Score = 34.0 bits (76), Expect = 7.3, Method: Composition-based stats.
Identities = 10/42 (23%), Positives = 23/42 (54%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQE 42
M+ + I I +++++ N DTK +P +V S++++
Sbjct: 1 MKLNKILIAALSVSLLVGCQDKNTDTKTETPSSVQETSNVEK 42
>gi|254374174|ref|ZP_04989656.1| outer membrane associated protein [Francisella novicida GA99-3548]
gi|151571894|gb|EDN37548.1| outer membrane associated protein [Francisella novicida GA99-3548]
Length = 393
Score = 34.0 bits (76), Expect = 7.4, Method: Composition-based stats.
Identities = 15/120 (12%), Positives = 45/120 (37%), Gaps = 7/120 (5%)
Query: 40 LQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC-DFLIEGHADELGS---- 94
+V F ++ + +++ ++++ + ++G+A + +
Sbjct: 269 TVNGDDVTVYLDTKFAYDKATLNAKGKKAIASFVNFIKDSNIGSVTVKGYASQGQTSSEF 328
Query: 95 RNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
+ L +RA AV +Y G+ + ++ +G + G + +N+R +
Sbjct: 329 DIYNQKLSEKRAQAVADYMKQLGLDSEKIITKGFGYDDTL--GGIPKSDPRNQRVEASVS 386
>gi|238764369|ref|ZP_04625319.1| hypothetical protein ykris0001_37320 [Yersinia kristensenii ATCC
33638]
gi|238697395|gb|EEP90162.1| hypothetical protein ykris0001_37320 [Yersinia kristensenii ATCC
33638]
Length = 375
Score = 34.0 bits (76), Expect = 7.4, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 38/120 (31%), Gaps = 8/120 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSS 98
+ F S + P +L + L + GH D+L S+
Sbjct: 113 QIIDSQNRPMFKMGSAQVEPYMRDILRAIAPILNDIPNKISLSGHTDDLPYASGERGYSN 172
Query: 99 IALGLRRAYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCR 157
L RA A +A G+ + ++V M +D NRR + + +
Sbjct: 173 WELSADRANASRRELLAGGLDEGKVLRVVGMASTMRLKEQASDD--PVNRRISILVLNKQ 230
>gi|296329058|ref|ZP_06871563.1| conserved hypothetical protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|296153777|gb|EFG94590.1| conserved hypothetical protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 176
Score = 34.0 bits (76), Expect = 7.6, Method: Composition-based stats.
Identities = 10/93 (10%), Positives = 21/93 (22%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ I L AI M+ ++ + E++ + V S
Sbjct: 1 MKMKKILFNLLAIFMLVVAVACGKKEAPTEDANAQQEAASEVATQDYHIGIVTTSVSQSE 60
Query: 61 IRPADIQVLSNLGSWLEKHDCDFLIEGHADELG 93
+ + + D
Sbjct: 61 DNFRGAEAVLKQYGSSNDEGGKITVVTVPDNFM 93
>gi|295678083|ref|YP_003606607.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
gi|295437926|gb|ADG17096.1| OmpA/MotB domain protein [Burkholderia sp. CCGE1002]
Length = 336
Score = 34.0 bits (76), Expect = 7.6, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 41/116 (35%), Gaps = 12/116 (10%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSSIALGLRR 105
F T+ + P +L +G L +++GH D + S+ L R
Sbjct: 179 RPMFATARDVVEPYMRDILREIGHTLNDVPNRIIVQGHTDAVPYAGGEKGYSNWELSADR 238
Query: 106 AYAVFNYFVARGISASR-MKVTSYGKEMPS--VYGHDEDAYAKNRRAIVFLKGCRA 158
A A VA G+ ++ M+V D + NRR + + ++
Sbjct: 239 ANASRRELVAGGMDEAKVMRVLGLASTQNLNKADPLDPE----NRRISIIVLNKKS 290
>gi|291543773|emb|CBL16882.1| hypothetical protein RUM_06730 [Ruminococcus sp. 18P13]
Length = 444
Score = 34.0 bits (76), Expect = 7.8, Method: Composition-based stats.
Identities = 8/43 (18%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQ 43
M+ +F+I + ++ G+D+ T P + E + +
Sbjct: 1 MKPK-LFLIAALCLSLTACGMDSSTTPAQQPTDQVTEQTTPAE 42
>gi|119479389|ref|XP_001259723.1| small monomeric GTPase (Gtr1), putative [Neosartorya fischeri NRRL
181]
gi|119407877|gb|EAW17826.1| small monomeric GTPase (Gtr1), putative [Neosartorya fischeri NRRL
181]
Length = 336
Score = 34.0 bits (76), Expect = 7.8, Method: Composition-based stats.
Identities = 12/88 (13%), Positives = 18/88 (20%), Gaps = 1/88 (1%)
Query: 59 YSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGI 118
L + + + D AV N +AR
Sbjct: 246 ARNTHTTPATAGFLVMHTKTPQFNVFLGRFTDNTYIFMVVPPGEAAYNCAVLNTMLAREG 305
Query: 119 SASRMKVTSYGKEMPSVYGHDEDAYAKN 146
+ YG P +A N
Sbjct: 306 FSKA-AAAGYGDGFPLPASDSPEARMAN 332
>gi|194364216|ref|YP_002026826.1| flagellar motor protein MotB [Stenotrophomonas maltophilia R551-3]
gi|194347020|gb|ACF50143.1| OmpA/MotB domain protein [Stenotrophomonas maltophilia R551-3]
Length = 318
Score = 33.6 bits (75), Expect = 8.0, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 37/116 (31%), Gaps = 7/116 (6%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD----ELGSRNSSI 99
+ FD S +++P Q+L L +L + GH D +
Sbjct: 164 QIVDKQNRPMFDLGSATLKPYTQQILHELAEYLNHVPNRISLTGHTDITAYSAARGYGNW 223
Query: 100 ALGLRRAYAVFNYFVARGISASRMK-VTSYGKEMPSVYGHDEDAYAKNRRAIVFLK 154
L RA A + G+ S++ V + D NRR + +
Sbjct: 224 ELSADRANAARRALIDGGLEDSKITRVVGLSSSV-LFDKADPQN-PINRRISIVVM 277
>gi|73532502|dbj|BAE19809.1| chemotaxis protein [Edwardsiella tarda]
Length = 222
Score = 33.6 bits (75), Expect = 8.0, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 39/124 (31%), Gaps = 14/124 (11%)
Query: 44 FSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGS-----RNSS 98
+ F S + P +L + L + + GH D+L S+
Sbjct: 42 QIIDSQNRPMFQNGSAQVEPYMRNILRAIAPILNELPNKISLSGHTDDLPYANGERGYSN 101
Query: 99 IALGLRRAYAVFNYFVARGISASRM-KVTSYGKE---MPSVYGHDEDAYAKNRRAIVFLK 154
L RA A +A G++ +++ +V A NRR + +
Sbjct: 102 WELSADRANASRRELIAGGLAGNKILRVVGMADTMNLRNLAGNA-----AVNRRISILVL 156
Query: 155 GCRA 158
A
Sbjct: 157 NKAA 160
>gi|290891779|ref|ZP_06554776.1| lipoprotein [Listeria monocytogenes FSL J2-071]
gi|290558373|gb|EFD91890.1| lipoprotein [Listeria monocytogenes FSL J2-071]
Length = 120
Score = 33.6 bits (75), Expect = 8.0, Method: Composition-based stats.
Identities = 8/46 (17%), Positives = 17/46 (36%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSS 46
M+ ++I I A+ + + S + ++ T E E
Sbjct: 1 MKKTSIIFIFCALLLTACSSTTKETPRQTTEATGTIEQVETESILI 46
>gi|311992757|ref|YP_004009624.1| hypothetical protein Acj61p007 [Acinetobacter phage Acj61]
gi|295815046|gb|ADG35972.1| hypothetical protein Acj61p007 [Acinetobacter phage Acj61]
Length = 182
Score = 33.6 bits (75), Expect = 8.1, Method: Composition-based stats.
Identities = 16/144 (11%), Positives = 34/144 (23%), Gaps = 6/144 (4%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ I + + +G + D+ + V + V D++
Sbjct: 1 MKRLNKTIAMLIVPAFVFAGCSSQDSVATQDSGVAK---TADGAYVQVADTLNKSYEEAK 57
Query: 61 IRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVARGISA 120
+ A G + + + N ++
Sbjct: 58 ANGYTGSYEDWVKLLELHQTNPQAASQQAASSGYSGMDMLMAGAMGMMLGNMMSNGSYNS 117
Query: 121 SRMKVTSYGKE---MPSVYGHDED 141
R + SYG PS +
Sbjct: 118 YRDRQRSYGSSAYVRPSASNLNSA 141
>gi|222111071|ref|YP_002553335.1| ompa/motb domain-containing protein [Acidovorax ebreus TPSY]
gi|221730515|gb|ACM33335.1| OmpA/MotB domain protein [Acidovorax ebreus TPSY]
Length = 179
Score = 33.6 bits (75), Expect = 8.3, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 40/104 (38%), Gaps = 12/104 (11%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FF T + P + L ++ + ++ G D G + L +RA AV +
Sbjct: 83 FFATGKAELAPGANEALGDVVKGVVDGGKTAVVSGFHDATGDAAVNAELAKQRALAVRDA 142
Query: 113 FVARGISASRMKVTSYGKEMPSV---YGHDEDAYAKNRRAIVFL 153
A G++ ++++ P G + +A RR V L
Sbjct: 143 LKALGVAEEKVELK-----KPEATQGSGSNAEA----RRVEVIL 177
>gi|121594411|ref|YP_986307.1| OmpA/MotB domain-containing protein [Acidovorax sp. JS42]
gi|120606491|gb|ABM42231.1| OmpA/MotB domain protein [Acidovorax sp. JS42]
Length = 179
Score = 33.6 bits (75), Expect = 8.3, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 40/104 (38%), Gaps = 12/104 (11%)
Query: 53 FFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNY 112
FF T + P + L ++ + ++ G D G + L +RA AV +
Sbjct: 83 FFATGKAELAPGANEALGDVVKGVVDGGKTAVVSGFHDATGDAAVNAELAKQRALAVRDA 142
Query: 113 FVARGISASRMKVTSYGKEMPSV---YGHDEDAYAKNRRAIVFL 153
A G++ ++++ P G + +A RR V L
Sbjct: 143 LKALGVAEEKVELK-----KPEATQGSGSNAEA----RRVEVIL 177
>gi|91785660|ref|YP_560866.1| flagellar motor protein MotB [Burkholderia xenovorans LB400]
gi|91689614|gb|ABE32814.1| outer membrane porin, OmpA/MotB family [Burkholderia xenovorans
LB400]
Length = 335
Score = 33.6 bits (75), Expect = 8.4, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 40/114 (35%), Gaps = 8/114 (7%)
Query: 51 SVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSR-----NSSIALGLRR 105
F T+ + P +L +G L +++GH D S+ L R
Sbjct: 178 RPMFATAKDQVEPYMRDILREIGHTLNDVPNRIIVQGHTDAAQYAGGEKGYSNWELSADR 237
Query: 106 AYAVFNYFVARGISASR-MKVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
A A +A G+ ++ M+V + +NRR + + ++
Sbjct: 238 ANASRRELIAGGMDEAKVMRVLGLASTQ--NLNKADPMDPENRRISIIVLNKKS 289
>gi|150024745|ref|YP_001295571.1| aminopeptidase [Flavobacterium psychrophilum JIP02/86]
gi|149771286|emb|CAL42755.1| Probable aminopeptidase [Flavobacterium psychrophilum JIP02/86]
Length = 342
Score = 33.6 bits (75), Expect = 8.5, Method: Composition-based stats.
Identities = 9/48 (18%), Positives = 21/48 (43%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSV 48
M+Y F++L IT+ S S ++ + T ++ + + +
Sbjct: 1 MKYKNPFLVLVLITITSCSAQKARKNEVVTDATKYIKTITTQDLKTHL 48
>gi|328957552|ref|YP_004374938.1| D-methionine-binding lipoprotein MetQ [Carnobacterium sp. 17-4]
gi|328673876|gb|AEB29922.1| D-methionine-binding lipoprotein MetQ [Carnobacterium sp. 17-4]
Length = 286
Score = 33.6 bits (75), Expect = 8.6, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 34/100 (34%), Gaps = 1/100 (1%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M +F+ A+ +++ G N D+ SS + S+ QE+ V + T
Sbjct: 1 MIKKGLFLSSLAL-VLAACGTGNSDSGSSSEVATTDGSAEQEEIVIKVASHLPPMTDIVD 59
Query: 61 IRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIA 100
I I + + + DE+ + +
Sbjct: 60 IAGEVIAEPYKVELVEVSDNIQYNEALLNDEVDANFAQHK 99
>gi|223985270|ref|ZP_03635351.1| hypothetical protein HOLDEFILI_02657 [Holdemania filiformis DSM
12042]
gi|223962754|gb|EEF67185.1| hypothetical protein HOLDEFILI_02657 [Holdemania filiformis DSM
12042]
Length = 529
Score = 33.6 bits (75), Expect = 8.7, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 21/73 (28%), Gaps = 2/73 (2%)
Query: 1 MQYSTIFI--ILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSS 58
M+ + + +L A M++ G D T + + S D S
Sbjct: 1 MKKLSKLLTALLIACLMLAGCGTDEKKTDKDGTAGEAPAQDVLIYAVNGDPQSFNPDMKS 60
Query: 59 YSIRPADIQVLSN 71
Q + N
Sbjct: 61 DDYAYQINQNIYN 73
>gi|52424956|ref|YP_088093.1| MltB protein [Mannheimia succiniciproducens MBEL55E]
gi|52307008|gb|AAU37508.1| MltB protein [Mannheimia succiniciproducens MBEL55E]
Length = 369
Score = 33.6 bits (75), Expect = 8.7, Method: Composition-based stats.
Identities = 7/43 (16%), Positives = 19/43 (44%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQ 43
M+ F+ L+A M++ +N + ++S + + +
Sbjct: 1 MKIKYKFLALTACLMLAGCSSNNNKSAVNSAEDLSALPATAVY 43
>gi|160936778|ref|ZP_02084144.1| hypothetical protein CLOBOL_01668 [Clostridium bolteae ATCC
BAA-613]
gi|158440270|gb|EDP18016.1| hypothetical protein CLOBOL_01668 [Clostridium bolteae ATCC
BAA-613]
Length = 324
Score = 33.6 bits (75), Expect = 8.9, Method: Composition-based stats.
Identities = 9/68 (13%), Positives = 23/68 (33%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ + L+++ +S++G + +T S+ D+ + +
Sbjct: 22 MKKRLFSLALASVMALSLAGCGGSKEAATEAETKAETEQTAADTSAKAEDTTAQEETKAE 81
Query: 61 IRPADIQV 68
A V
Sbjct: 82 SEAASEAV 89
>gi|226223142|ref|YP_002757249.1| phosphoglycerate mutase [Listeria monocytogenes Clip81459]
gi|225875604|emb|CAS04307.1| Putative phosphoglycerate mutase [Listeria monocytogenes serotype
4b str. CLIP 80459]
Length = 271
Score = 33.6 bits (75), Expect = 9.0, Method: Composition-based stats.
Identities = 8/65 (12%), Positives = 20/65 (30%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ + ++++ ++ I+G N T E + G ++ T
Sbjct: 1 MKKNIFKLMMALCAVLLIAGCGNSTTADKKETKETKEDGTVTFYVVRHGKTMLNTTDRVQ 60
Query: 61 IRPAD 65
Sbjct: 61 GWSDA 65
>gi|205372177|ref|ZP_03224992.1| iron ABC transporter permease [Bacillus coahuilensis m4-4]
Length = 348
Score = 33.6 bits (75), Expect = 9.0, Method: Composition-based stats.
Identities = 5/61 (8%), Positives = 22/61 (36%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ ++F+ + ++++ G + + ++ + +S + +
Sbjct: 1 MKKISLFLTVIMSMLLALVGCAQEEPSTTDTSNNEGTNTEEAADASGYPIVIEHAFGETT 60
Query: 61 I 61
I
Sbjct: 61 I 61
>gi|217966273|ref|YP_002351951.1| lipoprotein [Listeria monocytogenes HCC23]
gi|217335543|gb|ACK41337.1| lipoprotein, putative [Listeria monocytogenes HCC23]
gi|307572122|emb|CAR85301.1| lipoprotein, putative [Listeria monocytogenes L99]
Length = 120
Score = 33.6 bits (75), Expect = 9.2, Method: Composition-based stats.
Identities = 8/46 (17%), Positives = 17/46 (36%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSS 46
M+ ++I I A+ + + S + ++ T E E
Sbjct: 1 MKKTSIIFIFCALLLTACSTTTKETPRQTTEATGTIEQVETESILI 46
>gi|295090154|emb|CBK76261.1| hypothetical protein [Clostridium cf. saccharolyticum K10]
Length = 215
Score = 33.6 bits (75), Expect = 9.3, Method: Composition-based stats.
Identities = 9/95 (9%), Positives = 32/95 (33%), Gaps = 2/95 (2%)
Query: 1 MQYST--IFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSS 58
M+ T + ++L+A+++ + + + ++ + E + + S
Sbjct: 1 MKKKTYVLAVVLAALSLSACAPASESGEQATADMEESAQQDTTEAPETEEDTQDSEEAGS 60
Query: 59 YSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELG 93
+D ++ + E + ++ D
Sbjct: 61 SQAEASDEKLNEIYAAVKEAYGERYIPSMELDSEM 95
>gi|291450364|ref|ZP_06589754.1| lipoprotein [Streptomyces albus J1074]
gi|291353313|gb|EFE80215.1| lipoprotein [Streptomyces albus J1074]
Length = 273
Score = 33.6 bits (75), Expect = 9.3, Method: Composition-based stats.
Identities = 20/155 (12%), Positives = 45/155 (29%), Gaps = 16/155 (10%)
Query: 1 MQYSTIFIILSAITM-MSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSY 59
M+ +T F+ A+ + +S G D+ D L ++ +V D
Sbjct: 1 MKITTAFLATGALALGLSACGGSESDSAGGDKDGPLTVAASP------TPHAVILDYVKK 54
Query: 60 SIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYA------VFNYF 113
++ L +G D ++ ++ V +
Sbjct: 55 NLAKDAGLELDVKEFTDYVLPNTATEDGSVDANFFQHQPYLDDFQKKNGTHLKSLVPVHL 114
Query: 114 VARGISASRMKVTS---YGKEMPSVYGHDEDAYAK 145
G+ ++++K G + +A A
Sbjct: 115 EPLGLYSNKIKSAGDLKKGATIALPNDTTNEARAL 149
>gi|239826711|ref|YP_002949335.1| lipoprotein [Geobacillus sp. WCH70]
gi|239807004|gb|ACS24069.1| lipoprotein [Geobacillus sp. WCH70]
Length = 172
Score = 33.6 bits (75), Expect = 9.4, Method: Composition-based stats.
Identities = 9/118 (7%), Positives = 31/118 (26%), Gaps = 4/118 (3%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPD--TVLNESSLQEQFSSSVGDSVFFDTSS 58
M++ I I + A+ +++ +G + K S D + V +
Sbjct: 1 MKWKGILITMLAVLILAAAGCGKKEVKPISIDEKNDKCAVCNMAVMDNQFATEVILENGK 60
Query: 59 YSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFNYFVAR 116
+ + + ++ + + + + ++
Sbjct: 61 ALVFDDIGCMYKWISEHKDEKLQEMFVRDY--NTKDWIKADKATYVYNKSIRTPMAYN 116
>gi|291288745|ref|YP_003505561.1| OmpA/MotB domain protein [Denitrovibrio acetiphilus DSM 12809]
gi|290885905|gb|ADD69605.1| OmpA/MotB domain protein [Denitrovibrio acetiphilus DSM 12809]
Length = 296
Score = 33.6 bits (75), Expect = 9.6, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 39/132 (29%), Gaps = 5/132 (3%)
Query: 22 DNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDC 81
+ + + + E + S+++ + + R N+ S
Sbjct: 159 EKEGSVVVVFEANGTECADNGILSANLNEQGAIYFALGEFRKELTDKEINIISNANNAKK 218
Query: 82 DFLIEGHAD----ELGSRNSSIALGLRRAYAVFNYFVARGISASRMKVTSYGKEMPSVYG 137
+I D + L +RA N GI A ++ G P+
Sbjct: 219 YVIIGHTDDVRVVPNTEYADNFELSAKRAAFFLNKLTEAGIPAENVQTLGLGPAFPAAPN 278
Query: 138 HDEDAYAKNRRA 149
++ NRRA
Sbjct: 279 K-KNGQPLNRRA 289
>gi|254975775|ref|ZP_05272247.1| amino-acid ABC transporter,substrate-binding protein [Clostridium
difficile QCD-66c26]
gi|255093162|ref|ZP_05322640.1| amino-acid ABC transporter,substrate-binding protein [Clostridium
difficile CIP 107932]
gi|255314904|ref|ZP_05356487.1| amino-acid ABC transporter,substrate-binding protein [Clostridium
difficile QCD-76w55]
gi|255517578|ref|ZP_05385254.1| amino-acid ABC transporter,substrate-binding protein [Clostridium
difficile QCD-97b34]
gi|255650689|ref|ZP_05397591.1| amino-acid ABC transporter,substrate-binding protein [Clostridium
difficile QCD-37x79]
gi|260683776|ref|YP_003215061.1| putative amino-acid ABC transporter substrate-binding protein
[Clostridium difficile CD196]
gi|260687436|ref|YP_003218570.1| putative amino-acid ABC transporter substrate-binding protein
[Clostridium difficile R20291]
gi|306520614|ref|ZP_07406961.1| putative amino-acid ABC transporter, substrate-binding protein
[Clostridium difficile QCD-32g58]
gi|260209939|emb|CBA63913.1| probable amino-acid ABC transporter, substrate-binding protein
[Clostridium difficile CD196]
gi|260213453|emb|CBE05130.1| probable amino-acid ABC transporter, substrate-binding protein
[Clostridium difficile R20291]
Length = 267
Score = 33.6 bits (75), Expect = 9.6, Method: Composition-based stats.
Identities = 7/51 (13%), Positives = 21/51 (41%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDS 51
M+ + I+L+ + + I+G + + K + ++ + + D
Sbjct: 1 MKKLKLIIMLALVLALLITGCSSGNNKNKEEQKTIRVATSGTYYPFAFKDK 51
>gi|299821234|ref|ZP_07053122.1| conserved hypothetical protein [Listeria grayi DSM 20601]
gi|299816899|gb|EFI84135.1| conserved hypothetical protein [Listeria grayi DSM 20601]
Length = 288
Score = 33.6 bits (75), Expect = 9.7, Method: Composition-based stats.
Identities = 7/64 (10%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ ++F ++ I+++ ++ + ++ D+ ++ Q++ ++S D + +
Sbjct: 1 MK-KSLFFLIFIISIVLLASCSQKNDTPATSDSSSSKQEKQDKQTTSKKDKEKSQPARAT 59
Query: 61 IRPA 64
Sbjct: 60 GDKE 63
>gi|270627007|ref|ZP_06221936.1| hypothetical protein HAINFHK1212_0500 [Haemophilus influenzae
HK1212]
gi|270317645|gb|EFA29070.1| hypothetical protein HAINFHK1212_0500 [Haemophilus influenzae
HK1212]
Length = 148
Score = 33.6 bits (75), Expect = 9.8, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 31/90 (34%), Gaps = 1/90 (1%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPD-TVLNESSLQEQFSSSVGDSVFFDTSSY 59
M+ S I + AI+ +S G + T +P+ +N + + + + F
Sbjct: 1 MKLSRILLSTIAISALSACGNLSKVTDAGTPEYKNINGEQVPQLVWPKIDSATFNHDGRQ 60
Query: 60 SIRPADIQVLSNLGSWLEKHDCDFLIEGHA 89
+ L + S + K LI
Sbjct: 61 FGSWPNWDNLRMIESGMNKDQIRQLIGNPH 90
>gi|217965396|ref|YP_002351074.1| phosphoglycerate mutase family protein [Listeria monocytogenes
HCC23]
gi|217334666|gb|ACK40460.1| phosphoglycerate mutase family protein [Listeria monocytogenes
HCC23]
gi|307570048|emb|CAR83227.1| phosphoglycerate mutase family protein [Listeria monocytogenes
L99]
Length = 271
Score = 33.6 bits (75), Expect = 9.8, Method: Composition-based stats.
Identities = 7/65 (10%), Positives = 20/65 (30%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ + ++++ ++ I+G N + E + G ++ T
Sbjct: 1 MKKNIFKLLMALCAVLLIAGCGNSTSADKKETKETKEDGTVTFYVVRHGKTMLNTTDRVQ 60
Query: 61 IRPAD 65
Sbjct: 61 GWSDA 65
>gi|103488396|ref|YP_617957.1| OmpA/MotB [Sphingopyxis alaskensis RB2256]
gi|98978473|gb|ABF54624.1| OmpA/MotB [Sphingopyxis alaskensis RB2256]
Length = 287
Score = 33.6 bits (75), Expect = 9.8, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 46/124 (37%), Gaps = 10/124 (8%)
Query: 38 SSLQEQFSSSV---GDSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD---- 90
+ E + D F + + PA ++ + + + + +I GH D
Sbjct: 159 TETMEGLRIDIVDDADFSMFALGTSQLTPAGAKLFAEVAVPIAEAPNQLMIRGHTDAAPW 218
Query: 91 ELGSRNSSIALGLRRAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRA 149
S ++ L + RA +Y RG+++ R ++ P + + +NRR
Sbjct: 219 SAKSGTNNWRLSVDRAEVTRHYLEFRGVASDRFARIEGVADREPYIP--SDRFDPRNRRI 276
Query: 150 IVFL 153
+ L
Sbjct: 277 SITL 280
>gi|16802560|ref|NP_464045.1| hypothetical protein lmo0517 [Listeria monocytogenes EGD-e]
gi|47094743|ref|ZP_00232358.1| phosphoglycerate mutase family protein [Listeria monocytogenes
str. 1/2a F6854]
gi|224500388|ref|ZP_03668737.1| hypothetical protein LmonF1_12259 [Listeria monocytogenes Finland
1988]
gi|224502182|ref|ZP_03670489.1| hypothetical protein LmonFR_06627 [Listeria monocytogenes FSL
R2-561]
gi|254829390|ref|ZP_05234077.1| phosphoglycerate mutase [Listeria monocytogenes FSL N3-165]
gi|254900257|ref|ZP_05260181.1| hypothetical protein LmonJ_10600 [Listeria monocytogenes J0161]
gi|254911189|ref|ZP_05261201.1| phosphoglycerate mutase family protein [Listeria monocytogenes
J2818]
gi|254935517|ref|ZP_05267214.1| phosphoglycerate mutase [Listeria monocytogenes F6900]
gi|284800792|ref|YP_003412657.1| hypothetical protein LM5578_0540 [Listeria monocytogenes 08-5578]
gi|284993978|ref|YP_003415746.1| hypothetical protein LM5923_0539 [Listeria monocytogenes 08-5923]
gi|16409893|emb|CAC98596.1| lmo0517 [Listeria monocytogenes EGD-e]
gi|47016883|gb|EAL07801.1| phosphoglycerate mutase family protein [Listeria monocytogenes
str. 1/2a F6854]
gi|258601804|gb|EEW15129.1| phosphoglycerate mutase [Listeria monocytogenes FSL N3-165]
gi|258608096|gb|EEW20704.1| phosphoglycerate mutase [Listeria monocytogenes F6900]
gi|284056354|gb|ADB67295.1| hypothetical protein LM5578_0540 [Listeria monocytogenes 08-5578]
gi|284059445|gb|ADB70384.1| hypothetical protein LM5923_0539 [Listeria monocytogenes 08-5923]
gi|293589119|gb|EFF97453.1| phosphoglycerate mutase family protein [Listeria monocytogenes
J2818]
Length = 271
Score = 33.6 bits (75), Expect = 9.8, Method: Composition-based stats.
Identities = 7/65 (10%), Positives = 20/65 (30%)
Query: 1 MQYSTIFIILSAITMMSISGIDNLDTKISSPDTVLNESSLQEQFSSSVGDSVFFDTSSYS 60
M+ + ++++ ++ I+G N + E + G ++ T
Sbjct: 1 MKKNIFKLLMALCAVLLIAGCGNSTSADKKETKETKEDGTVTFYVVRHGKTMLNTTDRVQ 60
Query: 61 IRPAD 65
Sbjct: 61 GWSDA 65
>gi|296115203|ref|ZP_06833844.1| hypothetical protein GXY_05461 [Gluconacetobacter hansenii ATCC
23769]
gi|295978304|gb|EFG85041.1| hypothetical protein GXY_05461 [Gluconacetobacter hansenii ATCC
23769]
Length = 124
Score = 33.6 bits (75), Expect = 9.9, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 41/102 (40%), Gaps = 6/102 (5%)
Query: 52 VFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHADELGSRNSSIALGLRRAYAVFN 111
VFF +S + V+S H+ +EG+A ++ L + RA V
Sbjct: 26 VFFTQNSTQLDTPAQAVISQAAQRALAHNATVRVEGYAAASKDLSADELLAIDRAKIVAR 85
Query: 112 YFVARGISASRMKVTSYGKEMPSVYGHDEDAYAKNRRAIVFL 153
G+ ASR++ + P ++ED +RR + +
Sbjct: 86 QLAVDGVDASRIR------QQPRGPVNNEDGALASRRVEIEV 121
>gi|253990166|ref|YP_003041522.1| flagellar motor protein MotB [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253781616|emb|CAQ84779.1| chemotaxis motb protein [Photorhabdus asymbiotica]
Length = 327
Score = 33.6 bits (75), Expect = 9.9, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 34/115 (29%), Gaps = 8/115 (6%)
Query: 50 DSVFFDTSSYSIRPADIQVLSNLGSWLEKHDCDFLIEGHAD-----ELGSRNSSIALGLR 104
+ F S + +L + L + GH D S+ L
Sbjct: 155 NRPMFMIGSAKVESYMSDILRAIAPILNDIPNKISLSGHTDDLKYANGERGYSNWELSAD 214
Query: 105 RAYAVFNYFVARGISASRM-KVTSYGKEMPSVYGHDEDAYAKNRRAIVFLKGCRA 158
RA A + G+ ++ +V + + NRR + + +A
Sbjct: 215 RANASRRELLIGGLDEEKILRVVGMASTVRLKQED--ASSPVNRRISILVLNKQA 267
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.316 0.123 0.332
Lambda K H
0.267 0.0372 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 847,174,723
Number of Sequences: 14124377
Number of extensions: 27500714
Number of successful extensions: 161736
Number of sequences better than 10.0: 8688
Number of HSP's better than 10.0 without gapping: 7080
Number of HSP's successfully gapped in prelim test: 1608
Number of HSP's that attempted gapping in prelim test: 152292
Number of HSP's gapped (non-prelim): 9340
length of query: 160
length of database: 4,842,793,630
effective HSP length: 122
effective length of query: 38
effective length of database: 3,119,619,636
effective search space: 118545546168
effective search space used: 118545546168
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 75 (33.6 bits)