RPSBLAST alignment for GI: 254780547 and conserved domain: COG1360

>gnl|CDD|31551 COG1360, MotB, Flagellar motor protein [Cell motility and secretion]. Length = 244

 Score = 51.9 bits (124), Expect = 8e-08
 Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 7/111 (6%)

Query: 50  DSVFFDTSSYSIRPADIQVLSNLGSWLEKHD-CDFLIEGHADEL---GSRNSSIALGLRR 105
           DS+ F + S  ++P    +L  +   L      +  IEGH D +   GS  S+  L   R
Sbjct: 132 DSLMFASGSAVVQPEFRDLLLKIAKLLADIPNGNIRIEGHTDNVPIKGSFYSNWELSAAR 191

Query: 106 AYAVFNYFVARG-ISASRMKVTSYGKEMPSVYGHDEDAY-AKNRRAIVFLK 154
           A +V    +  G + A R+ V  Y    P +  +D     AKNRR  + + 
Sbjct: 192 AQSVVRVLINGGLVEAKRLSVVGYADTRP-LADNDTAEGRAKNRRVEILIL 241