HHsearch alignment for GI: 254780548 and conserved domain: COG2706
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism].
Probab=99.31 E-value=1.4e-08 Score=74.51 Aligned_cols=222 Identities=15% Similarity=0.184 Sum_probs=133.5
Q ss_pred EEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEE---ECCCCC----------EEEEEECCCCCEEEEEECCCCCEE
Q ss_conf 5576899848998503467644303771179717997---437985----------244455158955677413787303
Q gi|254780548|r 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI---GNFRSM----------ILAPRFSSNGKRALISVQKDEAMD 283 (447)
Q Consensus 217 P~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~---~~~~~~----------~~~p~wSPDG~~la~~~s~~g~~~ 283 (447)
T Consensus 94 vsvd~~g~~vf~AnY~~g---~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~D--LG~Dr 168 (346)
T COG2706 94 VSVDEDGRFVFVANYHSG---SVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPD--LGTDR 168 (346)
T ss_pred EEECCCCCEEEEEECCCC---EEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCCCEEEEEE--CCCCE
T ss_conf 988788989999870576---7999873668950362002314788877010378653510079988999851--69866
Q ss_pred EEEEECCCCCCCCCCCCCCCC----CCEEEECCCCEEEEEECCCCCCCEEEEEECCCCCCEEE--------EECCCCEEE
Q ss_conf 899840477411002577643----20255216747899723776533157640256741112--------203530000
Q gi|254780548|r 284 IYSVDLQSNATERLTNTLFIN----ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS--------QDKEASYFD 351 (447)
Q Consensus 284 I~~~d~~~~~~~~lT~~~~~d----~~p~~spDG~~I~f~Sdr~G~~qiy~~~~~g~~~~rlT--------~~~~~~~~~ 351 (447)
T Consensus 169 i~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aa 248 (346)
T COG2706 169 IFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAA 248 (346)
T ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCEEE
T ss_conf 99998656863403310128998862389859986899984018789999976887678874200247544689974257
Q ss_pred EEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEECCCCC-CCC---EECCCCCEEEEEEEECCCCCEEEEEEECCCCC
Q ss_conf 46877688899997149915799998899967996627875-543---78878998999995089873379999889971
Q gi|254780548|r 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAP---TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427 (447)
Q Consensus 352 p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~~~~~-e~P---~wSPDG~~i~f~~~~~g~~~~~l~~~~~~G~~ 427 (447)
T Consensus 249 Ihis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa-~q~sd~-i~vf~~d~~TG~ 326 (346)
T COG2706 249 IHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAA-NQKSDN-ITVFERDKETGR 326 (346)
T ss_pred EEECCCCCEEEEECCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCEECCCCCEEEEE-CCCCCC-EEEEEECCCCCE
T ss_conf 999789888999558887089999868999899999850578587531447999899997-257984-899998588762
Q ss_pred EEECCCCCCCCCCCCCCC
Q ss_conf 473367887367531655
Q gi|254780548|r 428 ETLINTPAYASDPQWVGF 445 (447)
Q Consensus 428 ~~~~~~~g~~~~P~WsP~ 445 (447)
T Consensus 327 L~~~~~~~~~p~Pvcv~f 344 (346)
T COG2706 327 LTLLGRYAVVPEPVCVKF 344 (346)
T ss_pred EEECCCCCCCCCCEEEEE
T ss_conf 775231117799679997