HHsearch alignment for GI: 254780548 and conserved domain: COG3204
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=94.62 E-value=0.27 Score=25.72 Aligned_cols=110 Identities=9% Similarity=0.268 Sum_probs=42.0
Q ss_pred EEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCEEEEECCCCCE--EEEEECCCCCEEEEEECCCCCEEEEEEECCC
Q ss_conf 23455768998489985034676443037711797179974379852--4445515895567741378730389984047
Q gi|254780548|r 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI--LAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291 (447)
Q Consensus 214 ~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~~~~~~~~~~~--~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~ 291 (447)
T Consensus 88 vS~LTynp~~rtL-Fav-~-n~p~~iVElt~~-Gdlirti-PL~g~~DpE~Ieyig~n~-fvi~dER~~~l~~~~vd~~t 161 (316)
T COG3204 88 VSSLTYNPDTRTL-FAV-T-NKPAAIVELTKE-GDLIRTI-PLTGFSDPETIEYIGGNQ-FVIVDERDRALYLFTVDADT 161 (316)
T ss_pred CCCEEECCCCCEE-EEE-C-CCCCEEEEEECC-CCEEEEE-CCCCCCCHHHEEEECCCE-EEEEEHHCCEEEEEEECCCC
T ss_conf 4410667876628-996-4-899658999447-8368873-355568945807954977-99886122658999986896
Q ss_pred CCCC----CCC------CCCCCCCCEEEECCCCEEEEEECCCCCCC-EEEEE
Q ss_conf 7411----002------57764320255216747899723776533-15764
Q gi|254780548|r 292 NATE----RLT------NTLFINISASYSPDSSQIVFESDREGKEQ-LYVMQ 332 (447)
Q Consensus 292 ~~~~----~lT------~~~~~d~~p~~spDG~~I~f~Sdr~G~~q-iy~~~ 332 (447)
T Consensus 162 ~~~~~~~~~i~L~~~~k~N~GfE-GlA~d~~~~~l~~aKEr--~P~~I~~~~ 210 (316)
T COG3204 162 TVISAKVQKIPLGTTNKKNKGFE-GLAWDPVDHRLFVAKER--NPIGIFEVT 210 (316)
T ss_pred CEEECCCEEEECCCCCCCCCCCE-EEECCCCCCEEEEEECC--CCCEEEEEE
T ss_conf 18721325875255688775723-34417788648999813--882899981