HHsearch alignment for GI: 254780548 and conserved domain: COG3490

>COG3490 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=95.69  E-value=0.13  Score=27.81  Aligned_cols=251  Identities=17%  Similarity=0.144  Sum_probs=118.7

Q ss_pred             HHCCCCEEEEEEEEECCCCEEEEEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEC
Q ss_conf             41562189999974046622578999841555420000232337778899999998999997504455554417887513
Q gi|254780548|r  104 NSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES  183 (447)
Q Consensus       104 ~~~gad~lv~G~i~~~~~~~~~v~~~L~dv~~~~~i~~~~~~~~~~~~R~~ah~~ad~i~~~ltG~~G~f~triafv~~~  183 (447)
T Consensus        30 s~~~~qavfasaf~~-~dgs~g~a~---~~eaGk~v~~~~lp-------aR~Hgi~----~------~p~~~ravafARr   88 (366)
T COG3490          30 SLLRAQAVFASAFDA-RDGSFGAAT---LSEAGKIVFATALP-------ARGHGIA----F------HPALPRAVAFARR   88 (366)
T ss_pred             HHHCCCCHHEEEEEC-CCCCEEEEE---ECCCCCEEEEEECC-------CCCCCEE----C------CCCCCCEEEEEEC
T ss_conf             540675330000204-688443788---72577166533041-------0037702----1------7887513799716


Q ss_pred             CCCCCCCEEEEEECCCCCEEEEEEECCCC--CEEEEEECCCCCEEEEEEECCCC--CCCCCEEEECCCCCEEEEECCCCC
Q ss_conf             67644210012311455402688621764--02345576899848998503467--644303771179717997437985
Q gi|254780548|r  184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQ--ILFEPRFSPNQQKVAYATYDDED--ILRVYLMDTRIDRAPKRIGNFRSM  259 (447)
Q Consensus       184 ~~~~~~~~~l~i~d~DG~n~~~l~~~~~~--~~~sP~wSpDG~~Iay~s~~~~~--~~~i~~~~~~~g~~~~~~~~~~~~  259 (447)
T Consensus        89 PGt-----f~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~L-YATEndfd~~rGViGvYd~r~--~fqrvgE~~t~  160 (366)
T COG3490          89 PGT-----FAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLL-YATENDFDPNRGVIGVYDARE--GFQRVGEFSTH  160 (366)
T ss_pred             CCC-----EEEEECCCCCCCCEEEECCCCCEEECCCCCCCCCCEE-EEECCCCCCCCCEEEEEECCC--CCCEECCCCCC
T ss_conf             872-----6999877777576787446676351242117987579-952278777874489985200--00021233467


Q ss_pred             EEEE---EECCCCCEEEEEEC------CCC---------CEEEEEEECCCCCC-CCCCCC-----CCCCCCEEEECCCCE
Q ss_conf             2444---55158955677413------787---------30389984047741-100257-----764320255216747
Q gi|254780548|r  260 ILAP---RFSSNGKRALISVQ------KDE---------AMDIYSVDLQSNAT-ERLTNT-----LFINISASYSPDSSQ  315 (447)
Q Consensus       260 ~~~p---~wSPDG~~la~~~s------~~g---------~~~I~~~d~~~~~~-~~lT~~-----~~~d~~p~~spDG~~  315 (447)
T Consensus       161 GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l~~lSi-RHld~g~dgt-  238 (366)
T COG3490         161 GIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASLRQLSI-RHLDIGRDGT-  238 (366)
T ss_pred             CCCCCEEEEECCCCEEEEECCCEECCCCCCCCCCCHHHCCCCEEEEECCCCCHHHHCCCCHHHHHCCE-EEEEECCCCC-
T ss_conf             76821158835986899957864405555754234322585179984125541221137655532024-4454379983-


Q ss_pred             EEEEE----CCCCCCCEEEEEECCCCCCEEEE-----ECCCCE-EEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEE
Q ss_conf             89972----37765331576402567411122-----035300-004687768889999714991579999889996799
Q gi|254780548|r  316 IVFES----DREGKEQLYVMQSNGSDQKRISQ-----DKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL  385 (447)
Q Consensus       316 I~f~S----dr~G~~qiy~~~~~g~~~~rlT~-----~~~~~~-~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~  385 (447)
T Consensus       239 vwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee~~~~~anYigsiA~n~~~glV~lTSP~GN~~--vi~da~tG~vv~  316 (366)
T COG3490         239 VWFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQTAAFANYIGSIAANRRDGLVALTSPRGNRA--VIWDAATGAVVS  316 (366)
T ss_pred             EEEEEEEECCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCCEEEEECCCCCEE--EEEECCCCCEEE
T ss_conf             898777107876687400121589867225798899999986654415535577378745998768--999767784774


Q ss_pred             EE
Q ss_conf             66
Q gi|254780548|r  386 LV  387 (447)
Q Consensus       386 lt  387 (447)
T Consensus       317 ~a  318 (366)
T COG3490         317 EA  318 (366)
T ss_pred             CC
T ss_conf             14