HHsearch alignment for GI: 254780548 and conserved domain: KOG0313

Probab=94.44  E-value=0.3  Score=25.45  Aligned_cols=217  Identities=16%  Similarity=0.198  Sum_probs=115.4

Q ss_pred             EEEECCCCCEEEEEEECCCCCEEEEEE-CCCCCEEEEEEECCCCCCCCCEEEECCCCCE--EEEECCCCCEEEEEECCCC
Q ss_conf             123114554026886217640234557-6899848998503467644303771179717--9974379852444551589
Q gi|254780548|r  193 LCVMDRDGANIRYLTPSRDQILFEPRF-SPNQQKVAYATYDDEDILRVYLMDTRIDRAP--KRIGNFRSMILAPRFSSNG  269 (447)
Q Consensus       193 l~i~d~DG~n~~~l~~~~~~~~~sP~w-SpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~--~~~~~~~~~~~~p~wSPDG  269 (447)
T Consensus       127 ~riWd~~Gk~~~~~~Ght~~i-k~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sg  205 (423)
T KOG0313         127 SRIWDLKGKSIKTIVGHTGPI-KSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSG  205 (423)
T ss_pred             EEEEECCCCEEEEEECCCCCE-EEEEEEECCCCCCEEEEECCCCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEEECCCC
T ss_conf             688844883689983578650-0047872277440488814773489987517502566776740455640388864888


Q ss_pred             CEEEEEECCCCCEEEEE--EECCC----CCCC----------CCCC--------CCCCCCCEEEECCCCEEEEEECCCCC
Q ss_conf             55677413787303899--84047----7411----------0025--------77643202552167478997237765
Q gi|254780548|r  270 KRALISVQKDEAMDIYS--VDLQS----NATE----------RLTN--------TLFINISASYSPDSSQIVFESDREGK  325 (447)
Q Consensus       270 ~~la~~~s~~g~~~I~~--~d~~~----~~~~----------~lT~--------~~~~d~~p~~spDG~~I~f~Sdr~G~  325 (447)
T Consensus       206 tr~~-SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d--~~v~yS~SwDH-  281 (423)
T KOG0313         206 TRFC-SGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD--ATVIYSVSWDH-  281 (423)
T ss_pred             CEEE-EECCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEECC--CCCEEEECCCC-
T ss_conf             7698-3013440466256777553111101022344331001365674388414666224689759--87057621553-


Q ss_pred             CCEEEEEECCC-CCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCC--E-E-EEE-CCCCCCCCEECC
Q ss_conf             33157640256-7411122035300004687768889999714991579999889996--7-9-966-278755437887
Q gi|254780548|r  326 EQLYVMQSNGS-DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--E-R-LLV-EDSNLQAPTWSP  399 (447)
Q Consensus       326 ~qiy~~~~~g~-~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~--~-~-~lt-~~~~~e~P~wSP  399 (447)
T Consensus       282 -TIk~WDletg~~~~~~~--~~ksl~~i~~~~~~~Ll~~gss---dr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp  355 (423)
T KOG0313         282 -TIKVWDLETGGLKSTLT--TNKSLNCISYSPLSKLLASGSS---DRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSP  355 (423)
T ss_pred             -EEEEEEEECCCCEEEEE--CCCCEEEEECCCCCCEEEECCC---CCCEEECCCCCCCCCEEEEEEECCHHHHHHEECCC
T ss_conf             -47898752165022011--3752157420564240320577---77416417988998456786504211444031488


Q ss_pred             CCCEEEEEEEECCCCCEEEEEEE
Q ss_conf             89989999950898733799998
Q gi|254780548|r  400 SGRSLIFSRKKDGDTGSKLYSID  422 (447)
Q Consensus       400 DG~~i~f~~~~~g~~~~~l~~~~  422 (447)
T Consensus       356 ~~~~~~~S~S~D~t--~klWDvR  376 (423)
T KOG0313         356 TNEFQLVSGSYDNT--VKLWDVR  376 (423)
T ss_pred             CCCEEEEEEECCCE--EEEEEEC
T ss_conf             87428998741880--7888704