HHsearch alignment for GI: 254780548 and conserved domain: PRK03629
>PRK03629 tolB translocation protein TolB; Provisional.
Probab=100.00 E-value=0 Score=875.61 Aligned_cols=425 Identities=23% Similarity=0.386 Sum_probs=393.7
Q ss_pred HHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEECCCC--CCCCHHHHHHHHHHHHHHCCCCEEECCHHHCCCC
Q ss_conf 99999999999998720213316999971586642004630567--7530357899999986201751455086550346
Q gi|254780548|r 13 MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFV--SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQK 90 (447)
Q Consensus 13 m~~~l~l~l~l~~~~~~~~a~A~~~i~It~~~~~pi~IAv~~f~--~~~~~~~~i~~ii~~DL~~SG~F~~i~~~~~~~~ 90 (447)
T Consensus 1 mk~~~~~~f~~ll-l~~~~a~A~L~I~It~G~~~~~PIAV~pF~~~g~~~~~~~i~~II~~DL~rSG~F~~l~~~~~~~~ 79 (430)
T PRK03629 1 MKQALRVAFGFLI-LWASVLHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDIGGIVAADLRNSGKFNPLDRARLPQQ 79 (430)
T ss_pred CCHHHHHHHHHHH-HHHHHHCEEEEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEECCHHHCCCC
T ss_conf 9014888998999-875442237999993466773256992864478886467899999876875778150396785458
Q ss_pred CCCCCCCCCHHHHHHCCCCEEEEEEEEECCCCEEEEEEEEECCCC--CCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 676111457788741562189999974046622578999841555--420000232337778899999998999997504
Q gi|254780548|r 91 ITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168 (447)
Q Consensus 91 ~~~~~~~~~f~~W~~~gad~lv~G~i~~~~~~~~~v~~~L~dv~~--~~~i~~~~~~~~~~~~R~~ah~~ad~i~~~ltG 168 (447)
T Consensus 80 p~~~~~v-~~~dWr~lgad~LV~G~v~~~~~g~~~v~f~L~DV~~~~g~~l~~~~~~~~~~~lR~~aH~isD~Iy~~lTG 158 (430)
T PRK03629 80 PGTAQEV-QPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTG 158 (430)
T ss_pred CCCCCCC-CHHHHHHCCCCEEEEEEEEECCCCEEEEEEEEEEEECCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9841345-855777608988999999976896199999999941662338644588458799999999999999998519
Q ss_pred CCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCC
Q ss_conf 45555441788751367644210012311455402688621764023455768998489985034676443037711797
Q gi|254780548|r 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248 (447)
Q Consensus 169 ~~G~f~triafv~~~~~~~~~~~~l~i~d~DG~n~~~l~~~~~~~~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~ 248 (447)
T Consensus 159 ~~G~F~TrIayV~~~~~-~~~~~~L~i~D~DG~N~~~l~~~~~-~ilsP~wSPdg~~iaY~S~~~g~-p~iyi~dL~tg~ 235 (430)
T PRK03629 159 IKGAFRTRIAYVVQTNG-GQFPYELRVSDYDGYNQFVVHRSPQ-PLMSPAWSPDGSKLAYVTFESGR-SALVIQTLANGA 235 (430)
T ss_pred CCCCCCCEEEEEEECCC-CCCEEEEEEECCCCCCCEEEECCCC-CEEEEEECCCCCEEEEEEECCCC-CEEEEEECCCCC
T ss_conf 97541015999995179-9742799997788998688105897-20542083899989999822799-639999866784
Q ss_pred CEEEEECCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCE
Q ss_conf 17997437985244455158955677413787303899840477411002577643202552167478997237765331
Q gi|254780548|r 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328 (447)
Q Consensus 249 ~~~~~~~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qi 328 (447)
T Consensus 236 ~-~~~~~~~g~n~aP~~SPDG~~la~sls~~Gn~dIY~~dl~~~~~~rLT~~~~idt~PswSPDG~~I~F~SdR~G~PQI 314 (430)
T PRK03629 236 V-RQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQV 314 (430)
T ss_pred E-EEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCEEEEEECCCCCCCCEECCCCCEEEEEECCCCCCEE
T ss_conf 7-993144676667659989989999995689805999999999578987426878881284788889999789999619
Q ss_pred EEEEECCCCCCEEEEECCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEEEEECCCCCCCCEECCCCCEEEEEE
Q ss_conf 57640256741112203530000468776888999971499157999988999679966278755437887899899999
Q gi|254780548|r 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408 (447)
Q Consensus 329 y~~~~~g~~~~rlT~~~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~~lt~~~~~e~P~wSPDG~~i~f~~ 408 (447)
T Consensus 315 Y~m~~~g~~~~RiTf~g~~n-~~p~wSPdG~~Iaf~~~~~g~f~I~~~d~~~~~~~~lt~~~~dEsPswsPnG~~Ivf~~ 393 (430)
T PRK03629 315 YKVNINGGAPQRITWEGSQN-QDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSS 393 (430)
T ss_pred EEEECCCCCEEEEECCCCCC-CCCCCCCCCCEEEEEEECCCEEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 99989999889863269975-67636678998999993298379999968999779802799888976999998899998
Q ss_pred EECCCCCEEEEEEECCCCCEEEC-CCCCCCCCCCCCCCC
Q ss_conf 50898733799998899714733-678873675316557
Q gi|254780548|r 409 KKDGDTGSKLYSIDLNGRNETLI-NTPAYASDPQWVGFM 446 (447)
Q Consensus 409 ~~~g~~~~~l~~~~~~G~~~~~~-~~~g~~~~P~WsP~~ 446 (447)
T Consensus 394 ~~~g~~--~L~~vs~dG~~~~rl~~~~g~~~~PaWsP~l 430 (430)
T PRK03629 394 SQGMGS--VLNLVSTDGRFKARLPATDGQVKFPAWSPYL 430 (430)
T ss_pred CCCCCE--EEEEEECCCCEEEECCCCCCCCCCCCCCCCC
T ss_conf 469962--8999992798048765899876587778899