HHsearch alignment for GI: 254780548 and conserved domain: PRK11138
>PRK11138 outer membrane protein assembly complex subunit YfgL; Provisional.
Probab=95.54 E-value=0.15 Score=27.45 Aligned_cols=258 Identities=16% Similarity=0.186 Sum_probs=122.2
Q ss_pred EEEEEEEEECCCCEEE-----EEEEEECCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECC
Q ss_conf 8999997404662257-----89998415554200002323377788999999989999975044555544178875136
Q gi|254780548|r 110 VLVTGRVIKEGKDRLR-----VEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184 (447)
Q Consensus 110 ~lv~G~i~~~~~~~~~-----v~~~L~dv~~~~~i~~~~~~~~~~~~R~~ah~~ad~i~~~ltG~~G~f~triafv~~~~ 184 (447)
T Consensus 110 ~~lsgGv~~~~~-~v~vgt~~G~v~ALda~tG~~~W~~~~~~ev------------------~s~P~v~~g-~V~V~t~d 169 (394)
T PRK11138 110 ARLSGGVTAAGG-KVFIGSEKGLVYALDAEDGEVAWQTKVAGEA------------------LSRPVVSDG-VVVVHTSN 169 (394)
T ss_pred CEEEEEEEECCC-EEEEECCCCEEEEEECCCCCEEEEEECCCCE------------------ECCCEECCC-EEEEEECC
T ss_conf 507662367598-9999979988999987799553685279812------------------748732399-99999379
Q ss_pred CCCCCCEEEEEECC-CCCEEEEEEECCCCC----EEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCE--EEEE---
Q ss_conf 76442100123114-554026886217640----2345576899848998503467644303771179717--9974---
Q gi|254780548|r 185 VSGIIKNSLCVMDR-DGANIRYLTPSRDQI----LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP--KRIG--- 254 (447)
Q Consensus 185 ~~~~~~~~l~i~d~-DG~n~~~l~~~~~~~----~~sP~wSpDG~~Iay~s~~~~~~~~i~~~~~~~g~~~--~~~~--- 254 (447)
T Consensus 170 g------~l~ald~~tG~~~W~~~~~~p~ltlrG~ssP~~~~g---~v~~g~~~G---~l~al~~~~G~~~We~~v~~~~ 237 (394)
T PRK11138 170 G------QLQALNEDDGAVKWTVNLDVPSLTLRGESAPATAFG---GAFVGTDNG---RVAAVLMEQGQLIWQQRISQPT 237 (394)
T ss_pred C------EEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEECC---EEEEECCCC---EEEEEECCCCCHHHHHHHCCCC
T ss_conf 9------599987348968877516777610136523279899---999975899---6999999899311202304676
Q ss_pred ------CCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCE
Q ss_conf ------37985244455158955677413787303899840477411002577643202552167478997237765331
Q gi|254780548|r 255 ------NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328 (447)
Q Consensus 255 ------~~~~~~~~p~wSPDG~~la~~~s~~g~~~I~~~d~~~~~~~~lT~~~~~d~~p~~spDG~~I~f~Sdr~G~~qi 328 (447)
T Consensus 238 G~telerl~Dvd~~Pvv~--~~~v-y~~s~~G--~l~Ald~~tG~~~W~~~~ss~-~~~--~v~~~~vyv~~~-~~--~l 306 (394)
T PRK11138 238 GATEIDRLVDVDTTPVVV--GGVL-YAVAYNG--NLVALDLRSGQIVWKREYSSV-NDF--AVDGNRIYLVDQ-ND--RV 306 (394)
T ss_pred CCCCCCCCCCCCCCCEEE--CCEE-EEEECCC--CEEEEEHHCCCEEEEECCCCC-CCC--EEECCEEEEEEC-CC--CE
T ss_conf 766322223443563786--8989-9983588--389877313947343036777-782--583998999936-98--18
Q ss_pred EEEEECCCCCCEEEEE-CCCCEEEEEECCCCCEEEEEECCCCCEEEEEEECCCCCEE-EE-ECC-CCCCCCEECCCCCEE
Q ss_conf 5764025674111220-3530000468776888999971499157999988999679-96-627-875543788789989
Q gi|254780548|r 329 YVMQSNGSDQKRISQD-KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-LL-VED-SNLQAPTWSPSGRSL 404 (447)
Q Consensus 329 y~~~~~g~~~~rlT~~-~~~~~~~p~wSPdG~~Iaf~~~~~~~~~i~~~~~~g~~~~-~l-t~~-~~~e~P~wSPDG~~i 404 (447)
T Consensus 307 ~Ald~~tG~~~W~~~~l~~r~ls~P~~~--g~~v~vgd~eG---~lh~ld~~tG~~v~r~~~~~~~i~~~Pvv~-~~~-l 379 (394)
T PRK11138 307 YALDRRGGVELWSQSDLLHRLLTSPVLY--NGYLVVGDSEG---YLHWINREDGRFVAQQKVDSSGFYSEPVVA-DDK-L 379 (394)
T ss_pred EEEECCCCCEEEECCCCCCCCCCCCEEE--CCEEEEECCCC---EEEEEECCCCCEEEEEECCCCCEEECCEEE-CCE-E
T ss_conf 9987589837826354455643388898--99999997998---899999888989999984898504488998-999-9
Q ss_pred EEEEEECCCCCEEEEEEE
Q ss_conf 999950898733799998
Q gi|254780548|r 405 IFSRKKDGDTGSKLYSID 422 (447)
Q Consensus 405 ~f~~~~~g~~~~~l~~~~ 422 (447)
T Consensus 380 -yv~t~~G----~l~A~~ 392 (394)
T PRK11138 380 -LIQARDG----KVYAIT 392 (394)
T ss_pred -EEEECCC----EEEEEE
T ss_conf -9994995----899993