HHsearch alignment for GI: 254780548 and conserved domain: TIGR02722
>TIGR02722 lp_ uncharacterized lipoprotein; InterPro: IPR014094 Members of this protein family are restricted to the Proteobacteria, and all are predicted lipoproteins. In genomes that contain the thiK gene for the salvage enzyme thiamin kinase, the member of this family is encoded nearby..
Probab=95.47 E-value=0.024 Score=32.73 Aligned_cols=78 Identities=15% Similarity=0.262 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHC--CCCEEECCHH----HCCC------CCCCCCCCCC----HHHHHHCCCCEEEEEEEEECCCCE---
Q ss_conf 7899999986201--7514550865----5034------6676111457----788741562189999974046622---
Q gi|254780548|r 63 GKVSEVVSKDLQR--SDVFNLISQD----SFKQ------KITNPDSIPR----FQDWNSLGAQVLVTGRVIKEGKDR--- 123 (447)
Q Consensus 63 ~~i~~ii~~DL~~--SG~F~~i~~~----~~~~------~~~~~~~~~~----f~~W~~~gad~lv~G~i~~~~~~~--- 123 (447)
T Consensus 106 ~~lt~~i~~~L~~rs~G~F~l~~~~g~~g~~~~~~~~l~~~~~-~~~~~~~Ta~~~G~~~gA~y~LyG~~~~~~~-~nv~ 183 (215)
T TIGR02722 106 ESLTDKIRTALLKRSSGKFVLTDAQGASGALDRVREQLGLQRE-SGLVNQSTAIKKGRLVGADYSLYGKISSIVK-KNVD 183 (215)
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHC-CCCCCHHHHHHHHHHCCCCEEEEEHHHHHHH-HCCC
T ss_conf 9999999999998438947995064432068899998732320-6775867876542101420368610121223-2036
Q ss_pred -------EEEEEEEECCCCCCEECCC
Q ss_conf -------5789998415554200002
Q gi|254780548|r 124 -------LRVEFRLWDVKDRKQIIGK 142 (447)
Q Consensus 124 -------~~v~~~L~dv~~~~~i~~~ 142 (447)
T Consensus 184 g~~~~v~y~~~l~Lmd~~TGli~W~d 209 (215)
T TIGR02722 184 GSKKLVYYKFTLRLMDLKTGLIVWSD 209 (215)
T ss_pred CCCEEEEHEEEEEECCCCCCCEEECC
T ss_conf 87314412113543135465268658